Data sets available for Chard-1.0, annotations as of April 2021
==================================================================

Assembly
--------
- Chard-1.0.fna: Genome assembly of Illumina sequencing data of the 
chard genotype M4021 (Beta vulgaris ssp. vulgaris var cicla) using the 
SOAPdenovo software

Protein coding genes
--------------------
- Chard.genes.2104.cds.fa: CDS of predicted genes supported by mRNA evidence 
and filtered for transposable elements
- Chard.genes.2104.mrna.fa: mRNA sequences of these genes
- Chard.genes.2104.pep.fa: Translated protein sequences of these genes
- Chard.unfiltered_genes.2104.gff3: Positions of all protein coding genes 
predicted including genes which were not supported by mRNA evidence

Variants
--------
- Chard.variants.2104.txt: Variant positions on RefBeet-1.2 determined by 
mapping of Chard Illumina reads