Method VarType Scaf Position VarLen Reference Varient SOAPScaf ScafM SNP 0001.scaffold00002 4688 1 G T scaffold3192 ScafM SNP 0001.scaffold00002 4706 1 G T scaffold3192 ScafM SNP 0001.scaffold00002 4732 1 T G scaffold3192 ScafM SNP 0001.scaffold00002 4756 1 C A scaffold3192 ScafM SNP 0001.scaffold00002 4764 1 T C scaffold3192 ScafM SNP 0001.scaffold00002 4783 1 C G scaffold3192 ScafM SNP 0001.scaffold00002 5496 1 A C scaffold3192 ScafM SNP 0001.scaffold00002 5526 1 C A scaffold3192 ScafM INDEL 0001.scaffold00002 5553 4 TATA .... scaffold3192 ScafM SNP 0001.scaffold00002 5629 1 C T scaffold3192 ScafM INDEL 0001.scaffold00002 5730 5 ..... TAATA scaffold3192 ScafM INDEL 0001.scaffold00002 5761 7 ....... CGCTTGA scaffold3192 ScafM SNP 0001.scaffold00002 5793 1 G A scaffold3192 ScafM INDEL 0001.scaffold00002 5814 13 ............. CCCATCCTCAAAA scaffold3192 ScafM INDEL 0001.scaffold00002 5968 4 ATAC .... scaffold3192 ScafM INDEL 0001.scaffold00002 5981 8 AAGCAGAC ........ scaffold3192 ScafM INDEL 0001.scaffold00002 5995 2 TT .. scaffold3192 ScafM SNP 0001.scaffold00002 6045 1 A C scaffold3192 ScafM SNP 0001.scaffold00002 6069 1 T C scaffold3192 ScafM INDEL 0001.scaffold00002 6124 7 TTAAGTC ....... scaffold3192 ScafM SNP 0001.scaffold00002 6142 1 A G scaffold3192 ScafM SNP 0001.scaffold00002 6174 1 C T scaffold3192 ScafM SNP 0001.scaffold00002 13582 1 G A scaffold5760 ScafM SNP 0001.scaffold00002 14111 1 T G scaffold2419 ScafM SNP 0001.scaffold00002 14197 1 G A scaffold2419 ScafM SNP 0001.scaffold00002 14216 1 C T scaffold2419 ScafM SNP 0001.scaffold00002 14219 1 T C scaffold2419 ScafM SNP 0001.scaffold00002 14324 1 C A scaffold2419 ScafM INDEL 0001.scaffold00002 16175 7 GCCCATT ....... scaffold11212 ScafM SNP 0001.scaffold00002 16206 2 AT TG scaffold11212 ScafM SNP 0001.scaffold00002 16284 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 16547 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 16571 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 17276 4 AGTT .... scaffold11212 ScafM INDEL 0001.scaffold00002 17352 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 17375 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 17382 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 17422 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 17425 2 TC CA scaffold11212 ScafM SNP 0001.scaffold00002 17446 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 17625 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 17641 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 17644 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 17661 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 17679 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 17723 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 17725 1 A T scaffold11212 ReadM SNP 0001.scaffold00002 17951 1 G A - ReadM SNP 0001.scaffold00002 17964 1 A G - ScafM SNP 0001.scaffold00002 18039 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 18043 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 18056 5 ..... TTTAA scaffold11212 ScafM INDEL 0001.scaffold00002 18064 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 18119 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 18130 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 18148 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 18182 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 18186 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 18190 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 18213 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 18431 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 18451 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 18463 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 18474 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 18507 1 A T scaffold11212 ReadM SNP 0001.scaffold00002 19087 1 C A - ScafM INDEL 0001.scaffold00002 19593 3 AAT ... scaffold11212 ScafM SNP 0001.scaffold00002 19625 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 19689 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 19728 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 19833 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 19845 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 19851 1 T C scaffold11212 Both SNP 0001.scaffold00002 19939 1 A T scaffold11212 Both SNP 0001.scaffold00002 20028 1 G A scaffold11212 Both SNP 0001.scaffold00002 20139 1 A G scaffold11212 Both SNP 0001.scaffold00002 20187 1 G A scaffold11212 Both SNP 0001.scaffold00002 20238 1 A C scaffold11212 Both SNP 0001.scaffold00002 20240 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 20296 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 20300 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 20321 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 20323 1 G T scaffold11212 Both SNP 0001.scaffold00002 20350 1 A T scaffold11212 ScafM INDEL 0001.scaffold00002 20518 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 20543 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 20552 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 20558 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 20577 1 G A scaffold11212 ReadM SNP 0001.scaffold00002 20676 1 A T - ReadM SNP 0001.scaffold00002 20854 1 G A - ReadM SNP 0001.scaffold00002 20996 1 C T - ReadM SNP 0001.scaffold00002 21015 1 T C - ReadM SNP 0001.scaffold00002 21059 1 C A - ReadM SNP 0001.scaffold00002 21073 1 A G - ReadM SNP 0001.scaffold00002 21080 1 A C - ReadM SNP 0001.scaffold00002 21185 1 A G - ScafM SNP 0001.scaffold00002 21785 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 21838 1 G A scaffold11212 Both SNP 0001.scaffold00002 21908 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 22029 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 22037 1 . G scaffold11212 ScafM SNP 0001.scaffold00002 22049 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 22082 2 .. TT scaffold11212 ScafM SNP 0001.scaffold00002 22096 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 22185 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 22702 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 22717 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 22764 1 C G scaffold11212 ScafM INDEL 0001.scaffold00002 22785 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 22787 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 22807 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 22826 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 22837 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 22851 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 22865 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 22890 1 G A scaffold11212 Both SNP 0001.scaffold00002 22933 1 A G scaffold11212 Both SNP 0001.scaffold00002 23035 1 A C scaffold11212 Both SNP 0001.scaffold00002 23042 1 A G scaffold11212 Both INDEL 0001.scaffold00002 23106 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 23113 1 T A scaffold11212 Both SNP 0001.scaffold00002 23132 1 A C scaffold11212 Both SNP 0001.scaffold00002 23159 1 A G scaffold11212 Both SNP 0001.scaffold00002 23178 1 T C scaffold11212 Both SNP 0001.scaffold00002 23222 1 A T scaffold11212 Both SNP 0001.scaffold00002 23243 1 G A scaffold11212 Both INDEL 0001.scaffold00002 23329 2 TG .. scaffold11212 Both SNP 0001.scaffold00002 23446 1 G A scaffold11212 Both SNP 0001.scaffold00002 23492 1 T G scaffold11212 Both SNP 0001.scaffold00002 23720 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 23733 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 23739 2 AC TA scaffold11212 ScafM SNP 0001.scaffold00002 23748 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 23750 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 23770 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 23779 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 23782 1 A G scaffold11212 Both SNP 0001.scaffold00002 23875 1 C G scaffold11212 Both SNP 0001.scaffold00002 23956 1 A G scaffold11212 Both INDEL 0001.scaffold00002 24031 1 G . scaffold11212 Both SNP 0001.scaffold00002 24193 1 G C scaffold11212 Both INDEL 0001.scaffold00002 24263 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 24382 4 GATT .... scaffold11212 ScafM SNP 0001.scaffold00002 24428 1 A T scaffold11212 Both SNP 0001.scaffold00002 24452 1 G T scaffold11212 Both SNP 0001.scaffold00002 24456 1 G C scaffold11212 ReadM INDEL 0001.scaffold00002 24483 1 T . - Both SNP 0001.scaffold00002 24572 1 A G scaffold11212 Both SNP 0001.scaffold00002 24608 1 T C scaffold11212 Both SNP 0001.scaffold00002 25103 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 25268 1 G A scaffold11212 ReadM INDEL 0001.scaffold00002 25341 1 T . - Both INDEL 0001.scaffold00002 25343 1 A . scaffold11212 Both SNP 0001.scaffold00002 25530 1 G A scaffold11212 Both SNP 0001.scaffold00002 25548 1 T C scaffold11212 Both SNP 0001.scaffold00002 25855 1 G A scaffold11212 Both SNP 0001.scaffold00002 26273 1 T A scaffold11212 Both INDEL 0001.scaffold00002 26291 1 T . scaffold11212 Both SNP 0001.scaffold00002 26419 1 G A scaffold11212 Both SNP 0001.scaffold00002 26955 1 T C scaffold11212 Both SNP 0001.scaffold00002 26983 1 T C scaffold11212 Both INDEL 0001.scaffold00002 27009 1 . A scaffold11212 ScafM INDEL 0001.scaffold00002 27448 26 AAGTATAACTGTATAACAAGGAAATT .......................... scaffold11212 ScafM INDEL 0001.scaffold00002 27493 8 ........ ATATTTTT scaffold11212 ScafM SNP 0001.scaffold00002 27495 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 27732 2 CT TC scaffold11212 Both SNP 0001.scaffold00002 27923 1 T C scaffold11212 Both SNP 0001.scaffold00002 28032 1 C T scaffold11212 Both SNP 0001.scaffold00002 28038 1 G A scaffold11212 Both SNP 0001.scaffold00002 28078 1 A G scaffold11212 Both SNP 0001.scaffold00002 28441 1 A G scaffold11212 Both SNP 0001.scaffold00002 28580 1 G C scaffold11212 Both SNP 0001.scaffold00002 28690 1 A G scaffold11212 Both INDEL 0001.scaffold00002 28836 1 A . scaffold11212 Both INDEL 0001.scaffold00002 29081 1 A . scaffold11212 Both SNP 0001.scaffold00002 29504 1 G T scaffold11212 Both SNP 0001.scaffold00002 29601 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 29794 8 ........ AGTCCAGA scaffold11212 ScafM SNP 0001.scaffold00002 29813 1 A G scaffold11212 Both SNP 0001.scaffold00002 29838 1 C T scaffold11212 Both SNP 0001.scaffold00002 29933 1 C T scaffold11212 Both SNP 0001.scaffold00002 30010 1 G C scaffold11212 Both SNP 0001.scaffold00002 30060 1 C T scaffold11212 Both SNP 0001.scaffold00002 30065 1 T A scaffold11212 Both INDEL 0001.scaffold00002 30222 1 . T scaffold11212 Both INDEL 0001.scaffold00002 30823 1 A . scaffold11212 Both SNP 0001.scaffold00002 30840 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 30874 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 30881 1 A G scaffold11212 Both SNP 0001.scaffold00002 30910 1 C T scaffold11212 Both SNP 0001.scaffold00002 31050 1 C G scaffold11212 ScafM INDEL 0001.scaffold00002 31075 1 T . scaffold11212 ScafM SNP 0001.scaffold00002 31085 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 31096 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 31099 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 31111 2 TC AT scaffold11212 Both SNP 0001.scaffold00002 31259 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 31301 3 ATT ... scaffold11212 ScafM SNP 0001.scaffold00002 31354 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 31360 1 A G scaffold11212 Both SNP 0001.scaffold00002 31367 1 G T scaffold11212 Both SNP 0001.scaffold00002 31419 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 31829 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 31847 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 31862 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 31866 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 31913 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 31915 12 ............ AAAAAAAAAAAA scaffold11212 Both SNP 0001.scaffold00002 31952 1 A G scaffold11212 Both SNP 0001.scaffold00002 32018 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 32152 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 32156 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 32212 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 32219 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 32228 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 32291 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 32306 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 32317 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 32320 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 33811 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 33824 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 33828 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 33851 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 33864 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 33874 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 33876 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 33885 4 CTAT TCGG scaffold11212 ScafM INDEL 0001.scaffold00002 33895 2 .. CG scaffold11212 ScafM SNP 0001.scaffold00002 33905 2 AA GG scaffold11212 ScafM SNP 0001.scaffold00002 33913 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 33916 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 33918 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 33928 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 33929 2 .. AA scaffold11212 ScafM INDEL 0001.scaffold00002 33949 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 33951 6 TTTTTT AAAAAA scaffold11212 ScafM SNP 0001.scaffold00002 33961 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 33974 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 34019 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 34023 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 34032 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 34060 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 34064 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 34073 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 34117 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 34134 4 CCTA .... scaffold11212 ScafM SNP 0001.scaffold00002 34150 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 34154 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 34199 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 34264 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 34303 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 34305 2 GA AG scaffold11212 ScafM SNP 0001.scaffold00002 34406 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 34419 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 34448 2 CG TC scaffold11212 ScafM SNP 0001.scaffold00002 34499 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 34505 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 34571 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 34579 4 AAAG .... scaffold11212 ScafM INDEL 0001.scaffold00002 34590 3 ... AAA scaffold11212 ScafM INDEL 0001.scaffold00002 34648 2 AT .. scaffold11212 ScafM SNP 0001.scaffold00002 34651 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 34675 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 34677 2 GT .. scaffold11212 ScafM SNP 0001.scaffold00002 34693 1 G A scaffold11212 ReadM SNP 0001.scaffold00002 37881 1 A C - ScafM SNP 0001.scaffold00002 39143 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 39167 2 .. CA scaffold11212 ScafM SNP 0001.scaffold00002 39184 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 39194 2 .. TT scaffold11212 ScafM SNP 0001.scaffold00002 39196 6 GCGACA TTTTTT scaffold11212 ScafM SNP 0001.scaffold00002 39235 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 39316 13 ............. TCATCCCCTCATT scaffold11212 ScafM SNP 0001.scaffold00002 39341 2 TC AT scaffold11212 ScafM SNP 0001.scaffold00002 39394 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 39456 1 G . scaffold11212 ScafM SNP 0001.scaffold00002 39462 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 39523 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 39547 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 39571 1 G A scaffold11212 Both SNP 0001.scaffold00002 39599 1 A C scaffold11212 Both SNP 0001.scaffold00002 39605 1 G A scaffold11212 Both SNP 0001.scaffold00002 39828 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 39878 1 T A scaffold11212 Both SNP 0001.scaffold00002 39915 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 39926 8 CGAAAAAT ........ scaffold11212 ReadM SNP 0001.scaffold00002 40107 1 A T - ReadM SNP 0001.scaffold00002 40137 1 A T - ReadM SNP 0001.scaffold00002 40195 1 A G - ReadM SNP 0001.scaffold00002 40221 1 A T - ReadM SNP 0001.scaffold00002 40271 1 T C - ReadM SNP 0001.scaffold00002 40477 1 C A - ReadM SNP 0001.scaffold00002 41580 1 C G - ReadM SNP 0001.scaffold00002 41760 1 A G - ReadM SNP 0001.scaffold00002 41812 1 A G - ReadM INDEL 0001.scaffold00002 42099 1 A . - ScafM INDEL 0001.scaffold00002 42488 20 GCAGCAATAGGATGCACAAC .................... scaffold11212 ScafM INDEL 0001.scaffold00002 42509 4 GTAG .... scaffold11212 Both INDEL 0001.scaffold00002 42936 2 AC .. scaffold11212 Both SNP 0001.scaffold00002 43179 1 G T scaffold11212 Both SNP 0001.scaffold00002 43345 1 C T scaffold11212 Both SNP 0001.scaffold00002 43687 1 A G scaffold11212 ReadM SNP 0001.scaffold00002 44106 1 T C - ReadM SNP 0001.scaffold00002 44136 1 G A - ReadM SNP 0001.scaffold00002 44191 1 T C - ReadM SNP 0001.scaffold00002 44219 1 T C - ScafM INDEL 0001.scaffold00002 44361 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 44363 1 T A scaffold11212 Both SNP 0001.scaffold00002 44542 1 G A scaffold11212 Both SNP 0001.scaffold00002 44576 1 G A scaffold11212 Both SNP 0001.scaffold00002 45340 1 T G scaffold11212 ReadM INDEL 0001.scaffold00002 45402 1 A . - ReadM SNP 0001.scaffold00002 45488 1 C T - ReadM INDEL 0001.scaffold00002 45515 1 . A - ReadM SNP 0001.scaffold00002 45744 1 A G - Both SNP 0001.scaffold00002 46479 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 46516 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 46519 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 46546 2 AA TT scaffold11212 Both SNP 0001.scaffold00002 46847 1 G A scaffold11212 ReadM SNP 0001.scaffold00002 47245 1 A T - Both SNP 0001.scaffold00002 47337 1 C T scaffold11212 ReadM SNP 0001.scaffold00002 47494 1 G A - ReadM SNP 0001.scaffold00002 47503 1 G A - ReadM SNP 0001.scaffold00002 47597 1 A G - ReadM SNP 0001.scaffold00002 47964 1 C T - ReadM SNP 0001.scaffold00002 48006 1 C G - ReadM SNP 0001.scaffold00002 48228 1 A G - ReadM INDEL 0001.scaffold00002 48527 1 . A - ReadM SNP 0001.scaffold00002 48539 1 G A - ReadM SNP 0001.scaffold00002 48544 1 C A - ReadM SNP 0001.scaffold00002 48626 1 A G - ReadM SNP 0001.scaffold00002 48706 1 A G - ReadM SNP 0001.scaffold00002 48726 1 T C - ReadM SNP 0001.scaffold00002 48882 1 G A - ReadM SNP 0001.scaffold00002 48920 1 T G - ReadM SNP 0001.scaffold00002 48944 1 T G - ReadM SNP 0001.scaffold00002 48970 1 A C - ReadM SNP 0001.scaffold00002 49199 1 T C - ReadM SNP 0001.scaffold00002 49227 1 A G - ReadM SNP 0001.scaffold00002 49232 1 G A - ReadM SNP 0001.scaffold00002 49260 1 A C - ReadM SNP 0001.scaffold00002 49416 1 C T - ReadM SNP 0001.scaffold00002 49559 1 A G - ReadM SNP 0001.scaffold00002 49574 1 C T - ReadM SNP 0001.scaffold00002 49727 1 A G - ReadM SNP 0001.scaffold00002 49755 1 C T - ReadM SNP 0001.scaffold00002 49843 1 T C - ReadM INDEL 0001.scaffold00002 50103 1 . C - ReadM SNP 0001.scaffold00002 50170 1 A G - ReadM INDEL 0001.scaffold00002 50312 1 C . - ReadM SNP 0001.scaffold00002 50368 1 C T - ReadM SNP 0001.scaffold00002 50576 1 C T - ReadM SNP 0001.scaffold00002 50807 1 T A - ReadM SNP 0001.scaffold00002 50819 1 A G - ReadM SNP 0001.scaffold00002 50829 1 C T - ReadM SNP 0001.scaffold00002 51002 1 T C - ReadM SNP 0001.scaffold00002 51006 1 C G - ReadM SNP 0001.scaffold00002 51035 1 T C - ReadM SNP 0001.scaffold00002 51189 2 AA GC - ReadM SNP 0001.scaffold00002 51361 1 G A - ReadM SNP 0001.scaffold00002 51407 1 G A - ReadM SNP 0001.scaffold00002 51444 1 C T - ReadM SNP 0001.scaffold00002 51472 1 A T - ReadM INDEL 0001.scaffold00002 51885 1 . A - ReadM SNP 0001.scaffold00002 51938 1 T C - ReadM SNP 0001.scaffold00002 52033 1 A T - Both SNP 0001.scaffold00002 52439 1 A G scaffold11212 Both SNP 0001.scaffold00002 52539 1 G A scaffold11212 Both SNP 0001.scaffold00002 52559 1 C T scaffold11212 Both SNP 0001.scaffold00002 52614 1 A T scaffold11212 Both SNP 0001.scaffold00002 52657 1 A G scaffold11212 Both SNP 0001.scaffold00002 53127 1 A T scaffold11212 Both SNP 0001.scaffold00002 53226 1 T G scaffold11212 ReadM SNP 0001.scaffold00002 54103 1 T C - ReadM SNP 0001.scaffold00002 54505 1 C A - Both SNP 0001.scaffold00002 55291 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 55475 7 ....... GGCTGGG scaffold11212 ReadM SNP 0001.scaffold00002 55624 1 C T - ReadM SNP 0001.scaffold00002 55668 1 A G - ReadM SNP 0001.scaffold00002 55679 1 A G - ReadM SNP 0001.scaffold00002 55873 1 C T - ReadM SNP 0001.scaffold00002 56036 1 T A - Both SNP 0001.scaffold00002 56199 1 T C scaffold11212 Both SNP 0001.scaffold00002 56301 1 C T scaffold11212 Both SNP 0001.scaffold00002 56304 1 G A scaffold11212 Both INDEL 0001.scaffold00002 56696 1 G . scaffold11212 Both SNP 0001.scaffold00002 56773 1 A C scaffold11212 Both SNP 0001.scaffold00002 56941 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 57012 6 ...... TGTAAT scaffold11212 Both SNP 0001.scaffold00002 57098 1 C T scaffold11212 Both SNP 0001.scaffold00002 57165 1 C A scaffold11212 Both SNP 0001.scaffold00002 57412 1 G A scaffold11212 Both SNP 0001.scaffold00002 57770 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 57938 9 TACAAGAAA ......... scaffold11212 Both SNP 0001.scaffold00002 58103 1 T A scaffold11212 Both INDEL 0001.scaffold00002 58395 1 . G scaffold11212 ScafM INDEL 0001.scaffold00002 59046 3 CCC ... scaffold11212 Both INDEL 0001.scaffold00002 59105 1 G . scaffold11212 Both SNP 0001.scaffold00002 59598 1 C A scaffold11212 ScafM INDEL 0001.scaffold00002 59708 7 ....... GTTTTTT scaffold11212 Both SNP 0001.scaffold00002 60112 1 C T scaffold11212 Both SNP 0001.scaffold00002 60478 1 T A scaffold11212 Both SNP 0001.scaffold00002 60591 1 T C scaffold11212 Both SNP 0001.scaffold00002 60771 1 T G scaffold11212 Both SNP 0001.scaffold00002 60904 1 T A scaffold11212 Both SNP 0001.scaffold00002 61031 1 G T scaffold11212 Both SNP 0001.scaffold00002 61772 1 T G scaffold11212 Both SNP 0001.scaffold00002 62264 1 G A scaffold11212 Both SNP 0001.scaffold00002 62339 1 G A scaffold11212 Both SNP 0001.scaffold00002 62457 1 A G scaffold11212 Both INDEL 0001.scaffold00002 62487 1 T . scaffold11212 Both SNP 0001.scaffold00002 62531 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 62562 3 ATT TGC scaffold11212 ScafM SNP 0001.scaffold00002 62606 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 62617 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 62620 7 ....... ATGAAAG scaffold11212 ScafM SNP 0001.scaffold00002 62657 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 62665 1 C T scaffold11212 Both SNP 0001.scaffold00002 62716 1 A T scaffold11212 Both SNP 0001.scaffold00002 62722 1 G A scaffold11212 Both SNP 0001.scaffold00002 62757 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 62783 2 TG CT scaffold11212 ScafM SNP 0001.scaffold00002 62823 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 62834 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 62838 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 62850 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 62856 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 62873 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 62880 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 62897 1 T A scaffold11212 ScafM INDEL 0001.scaffold00002 62903 1 . C scaffold11212 ScafM INDEL 0001.scaffold00002 62908 3 ... CTT scaffold11212 ScafM SNP 0001.scaffold00002 62913 2 CT GC scaffold11212 ScafM SNP 0001.scaffold00002 62939 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 62942 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 62981 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 62997 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 63008 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 63018 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63048 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63060 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63072 1 T C scaffold11212 Both SNP 0001.scaffold00002 63155 1 G A scaffold11212 Both SNP 0001.scaffold00002 63158 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 63246 2 AG GA scaffold11212 ScafM INDEL 0001.scaffold00002 63293 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 63295 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 63301 5 ..... ATGGA scaffold11212 Both SNP 0001.scaffold00002 63430 1 T G scaffold11212 Both SNP 0001.scaffold00002 63435 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63451 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63466 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 63495 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 63508 4 .CCT TTGG scaffold11212 ScafM SNP 0001.scaffold00002 63518 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63524 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63537 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 63541 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 63546 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63582 3 ACA GTG scaffold11212 ScafM SNP 0001.scaffold00002 63586 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 63595 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 63617 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63624 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63631 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63640 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63642 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 63659 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 63675 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 63685 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 63692 28 CAGAAGCGGAATTGCCACAGCCACATAT ............................ scaffold11212 ScafM SNP 0001.scaffold00002 63727 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63785 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63806 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63818 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 63820 2 TG .. scaffold11212 ScafM SNP 0001.scaffold00002 63832 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 63851 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63863 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 63867 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 63875 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63886 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 63895 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 63901 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 63954 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63959 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 63964 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 63973 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 63981 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 63995 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 63998 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 64007 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 64017 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 64035 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 64057 1 C . scaffold11212 ScafM SNP 0001.scaffold00002 64084 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 64103 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 64107 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 67281 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 67283 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 67295 1 C G scaffold11212 ScafM INDEL 0001.scaffold00002 67324 4 .... TATA scaffold11212 ScafM SNP 0001.scaffold00002 67331 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 67347 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 67358 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 67373 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 67376 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 67382 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 67400 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 67419 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 67463 2 TG CA scaffold11212 ScafM SNP 0001.scaffold00002 67470 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 67481 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 67490 3 ... AAT scaffold11212 ScafM SNP 0001.scaffold00002 67509 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 67512 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 67519 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67527 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 67534 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 67541 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 67543 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67555 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 67570 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67587 2 CC TT scaffold11212 ScafM SNP 0001.scaffold00002 67600 2 GG TA scaffold11212 ScafM SNP 0001.scaffold00002 67621 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67630 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 67653 2 CT GA scaffold11212 ScafM SNP 0001.scaffold00002 67662 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 67680 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 67692 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 67874 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 67884 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67886 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 67898 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 67905 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 67942 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 67965 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 67968 2 CG TC scaffold11212 ScafM SNP 0001.scaffold00002 67999 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 68005 2 TC CA scaffold11212 ScafM SNP 0001.scaffold00002 68041 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 68044 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 68066 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 68092 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 68099 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 68145 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 68155 2 GT TA scaffold11212 ScafM SNP 0001.scaffold00002 68164 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 68201 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 68221 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 68230 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68239 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 68302 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 68315 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68317 2 GT AA scaffold11212 ScafM SNP 0001.scaffold00002 68320 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 68332 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68361 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 68366 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 68368 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68378 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 68388 3 AAT GGC scaffold11212 ScafM INDEL 0001.scaffold00002 68405 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 68407 1 T . scaffold11212 ScafM INDEL 0001.scaffold00002 68410 5 AATGT ..... scaffold11212 ScafM INDEL 0001.scaffold00002 68429 6 CTGCAC ...... scaffold11212 ScafM INDEL 0001.scaffold00002 68437 2 GC .. scaffold11212 ScafM INDEL 0001.scaffold00002 68440 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 68445 27 AGGATGTGGGAACTCCTTCAATCCTAT ........................... scaffold11212 ScafM INDEL 0001.scaffold00002 68475 2 CC .. scaffold11212 ScafM INDEL 0001.scaffold00002 68482 5 AACTT ..... scaffold11212 ScafM INDEL 0001.scaffold00002 68490 7 GTCTAAA ....... scaffold11212 ScafM INDEL 0001.scaffold00002 68498 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 68501 10 AATTATTCAA .......... scaffold11212 ScafM INDEL 0001.scaffold00002 68513 4 AAAT .... scaffold11212 ScafM INDEL 0001.scaffold00002 68518 1 A . scaffold11212 ScafM INDEL 0001.scaffold00002 68520 1 C . scaffold11212 ScafM INDEL 0001.scaffold00002 68524 4 ATAA ...G scaffold11212 ScafM SNP 0001.scaffold00002 68532 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 68538 2 GT .. scaffold11212 ScafM SNP 0001.scaffold00002 68546 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 68548 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 68556 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68558 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 68562 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 68572 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 68612 1 A T scaffold11212 ScafM INDEL 0001.scaffold00002 68622 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 68629 2 GA TT scaffold11212 ScafM SNP 0001.scaffold00002 68632 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 68657 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 68680 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 68711 1 C A scaffold11212 ScafM INDEL 0001.scaffold00002 68740 4 .... TATA scaffold11212 ScafM INDEL 0001.scaffold00002 68764 2 AT .. scaffold11212 ScafM SNP 0001.scaffold00002 68773 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 68804 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 78637 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 78642 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 78644 2 AA GT scaffold11212 ScafM INDEL 0001.scaffold00002 78708 16 ................ CCCATATTCCAAAAAT scaffold11212 ScafM SNP 0001.scaffold00002 78721 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 78740 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 78765 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 78773 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 78804 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 78874 2 GG TC scaffold11212 ScafM SNP 0001.scaffold00002 78879 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 78881 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 78890 3 ATA ... scaffold11212 ScafM SNP 0001.scaffold00002 78901 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 78918 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 78927 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 78929 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 78960 1 C A scaffold11212 ScafM INDEL 0001.scaffold00002 78988 3 ... TTG scaffold11212 ScafM SNP 0001.scaffold00002 79000 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 79025 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 79053 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 79068 1 T A scaffold11212 ScafM INDEL 0001.scaffold00002 79099 2 .. TA scaffold11212 ScafM SNP 0001.scaffold00002 79106 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 79131 2 AT TA scaffold11212 ScafM SNP 0001.scaffold00002 79147 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 79181 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 79234 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 79241 2 CA TT scaffold11212 ScafM SNP 0001.scaffold00002 79253 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 79295 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 79335 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 79378 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 79415 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 79429 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 79470 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 79502 2 .. TG scaffold11212 ScafM SNP 0001.scaffold00002 79519 1 A T scaffold11212 ReadM INDEL 0001.scaffold00002 79995 1 . C - ScafM SNP 0001.scaffold00002 80718 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 80728 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 80738 2 TG .. scaffold11212 ScafM INDEL 0001.scaffold00002 80745 1 C . scaffold11212 ScafM INDEL 0001.scaffold00002 80756 2 TT .. scaffold11212 ScafM INDEL 0001.scaffold00002 80761 3 TGT ..C scaffold11212 ScafM SNP 0001.scaffold00002 80787 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 80790 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 80799 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 80806 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 80810 2 AT TG scaffold11212 ScafM SNP 0001.scaffold00002 80847 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 80853 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 80865 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 80867 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 80885 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 81128 2 AG CA scaffold11212 ScafM SNP 0001.scaffold00002 81135 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 81169 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 81192 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 81195 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 81213 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 81235 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 81286 2 .. AA scaffold11212 ScafM SNP 0001.scaffold00002 81292 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 81294 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 81304 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 81332 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 81334 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 81343 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 81404 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 81438 13 ............. GATTCACTAGTTT scaffold11212 ScafM SNP 0001.scaffold00002 81450 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 81455 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 82442 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 82458 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 82461 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 82473 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 82474 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 82478 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 82483 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 82489 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 82541 1 T C scaffold11212 Both SNP 0001.scaffold00002 82731 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 82997 5 ..... TCTTT scaffold11212 ScafM INDEL 0001.scaffold00002 83009 1 . G scaffold11212 ScafM SNP 0001.scaffold00002 83034 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 83046 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 83057 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 83071 1 C . scaffold11212 ReadM INDEL 0001.scaffold00002 83189 1 . A - ScafM INDEL 0001.scaffold00002 83189 2 .G AA scaffold11212 ScafM SNP 0001.scaffold00002 83227 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 83230 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 83250 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 83256 1 A C scaffold11212 ScafM INDEL 0001.scaffold00002 83269 6 .....G AAAAAA scaffold11212 ReadM INDEL 0001.scaffold00002 83321 1 T . - ReadM SNP 0001.scaffold00002 83375 1 C T - ReadM SNP 0001.scaffold00002 83482 1 T A - ReadM SNP 0001.scaffold00002 83584 1 T A - ReadM SNP 0001.scaffold00002 83612 1 C T - ReadM SNP 0001.scaffold00002 83771 1 C T - ReadM SNP 0001.scaffold00002 83813 1 T A - ReadM SNP 0001.scaffold00002 83869 1 A C - ReadM SNP 0001.scaffold00002 83920 1 T C - ScafM INDEL 0001.scaffold00002 84034 9 ........G TTTTTTTAA scaffold11212 ScafM INDEL 0001.scaffold00002 84045 3 ... AAG scaffold11212 ScafM SNP 0001.scaffold00002 84047 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 84063 1 C . scaffold11212 ScafM INDEL 0001.scaffold00002 84065 1 G . scaffold11212 ScafM SNP 0001.scaffold00002 84085 1 T C scaffold11212 Both SNP 0001.scaffold00002 84115 1 C G scaffold11212 Both SNP 0001.scaffold00002 84232 1 C T scaffold11212 Both SNP 0001.scaffold00002 84319 1 C A scaffold11212 Both SNP 0001.scaffold00002 84357 1 C G scaffold11212 ReadM SNP 0001.scaffold00002 84714 1 A G - ReadM SNP 0001.scaffold00002 84726 1 A C - ReadM SNP 0001.scaffold00002 84730 1 T C - ReadM SNP 0001.scaffold00002 84788 1 T C - ReadM SNP 0001.scaffold00002 84798 1 T A - ReadM INDEL 0001.scaffold00002 84828 1 . C - ReadM SNP 0001.scaffold00002 84844 1 G A - ReadM SNP 0001.scaffold00002 87915 1 C T - ReadM SNP 0001.scaffold00002 89469 1 C T - ReadM SNP 0001.scaffold00002 89681 1 T G - ReadM SNP 0001.scaffold00002 89982 1 C A - ReadM SNP 0001.scaffold00002 89994 1 A G - ReadM SNP 0001.scaffold00002 90042 1 G C - ReadM SNP 0001.scaffold00002 90100 1 A C - ReadM SNP 0001.scaffold00002 90343 1 G A - ReadM SNP 0001.scaffold00002 90418 1 A C - ReadM INDEL 0001.scaffold00002 90480 1 G . - ScafM SNP 0001.scaffold00002 90713 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 90717 2 TT CC scaffold11212 ScafM SNP 0001.scaffold00002 90741 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 90819 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 90822 2 CA TC scaffold11212 ScafM SNP 0001.scaffold00002 90874 2 GG AA scaffold11212 ScafM SNP 0001.scaffold00002 90946 1 A T scaffold11212 ReadM SNP 0001.scaffold00002 91783 1 C T - ReadM SNP 0001.scaffold00002 91822 1 T C - ReadM SNP 0001.scaffold00002 91839 1 A C - Both SNP 0001.scaffold00002 91963 1 T C scaffold11212 Both SNP 0001.scaffold00002 92026 1 C A scaffold11212 ScafM INDEL 0001.scaffold00002 92110 2 .. AA scaffold11212 ScafM SNP 0001.scaffold00002 92114 1 A G scaffold11212 Both SNP 0001.scaffold00002 92142 1 A G scaffold11212 Both SNP 0001.scaffold00002 92274 1 A T scaffold11212 ReadM SNP 0001.scaffold00002 92370 1 G A - ReadM SNP 0001.scaffold00002 92372 1 G C - ScafM SNP 0001.scaffold00002 92495 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 92504 1 T A scaffold11212 ScafM INDEL 0001.scaffold00002 92540 3 ... TTA scaffold11212 ScafM SNP 0001.scaffold00002 92765 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 92826 4 TATA .... scaffold11212 ScafM SNP 0001.scaffold00002 92851 1 G T scaffold11212 ReadM SNP 0001.scaffold00002 93989 1 T C - ReadM SNP 0001.scaffold00002 93995 1 G T - ReadM SNP 0001.scaffold00002 94018 1 T C - ReadM SNP 0001.scaffold00002 94096 1 T A - ReadM SNP 0001.scaffold00002 94207 1 C T - ReadM SNP 0001.scaffold00002 94227 1 T A - ReadM SNP 0001.scaffold00002 94395 1 A G - ReadM SNP 0001.scaffold00002 94485 1 A G - ReadM SNP 0001.scaffold00002 94521 1 C T - ReadM SNP 0001.scaffold00002 94593 1 T C - ReadM SNP 0001.scaffold00002 94713 1 T A - ReadM SNP 0001.scaffold00002 94729 1 G A - ReadM SNP 0001.scaffold00002 94764 1 G T - ReadM SNP 0001.scaffold00002 94778 1 T G - ReadM SNP 0001.scaffold00002 94797 1 T C - Both SNP 0001.scaffold00002 94885 1 C T scaffold11212 Both SNP 0001.scaffold00002 94894 1 A G scaffold11212 Both SNP 0001.scaffold00002 94946 1 T G scaffold11212 Both SNP 0001.scaffold00002 95015 1 A G scaffold11212 Both SNP 0001.scaffold00002 95086 1 T C scaffold11212 ReadM SNP 0001.scaffold00002 95144 1 C T - ReadM SNP 0001.scaffold00002 95161 1 A T - Both SNP 0001.scaffold00002 95291 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 95326 5 ..... TTAAA scaffold11212 ScafM INDEL 0001.scaffold00002 95394 8 ........ TGACCGAT scaffold11212 ScafM INDEL 0001.scaffold00002 95423 4 TTAA .... scaffold11212 ScafM SNP 0001.scaffold00002 95442 1 G T scaffold11212 Both SNP 0001.scaffold00002 95470 1 A T scaffold11212 ReadM INDEL 0001.scaffold00002 95622 1 . T - ScafM INDEL 0001.scaffold00002 95622 2 .G TT scaffold11212 Both SNP 0001.scaffold00002 95835 1 G A scaffold11212 Both SNP 0001.scaffold00002 95904 1 C A scaffold11212 Both SNP 0001.scaffold00002 95909 1 T C scaffold11212 Both SNP 0001.scaffold00002 95940 1 T C scaffold11212 Both SNP 0001.scaffold00002 95996 1 T G scaffold11212 Both SNP 0001.scaffold00002 96083 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 96089 34 .................................. TATTCTATTTTGTCCCCTCAAAAAAAAAAAAAAA scaffold11212 ScafM SNP 0001.scaffold00002 96109 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 96157 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 96160 2 .. TT scaffold11212 ScafM SNP 0001.scaffold00002 96180 1 C T scaffold11212 ReadM SNP 0001.scaffold00002 96347 1 C G - ScafM SNP 0001.scaffold00002 97318 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 97348 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 97396 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 97435 1 A C scaffold11212 ScafM INDEL 0001.scaffold00002 97443 1 C . scaffold11212 ScafM SNP 0001.scaffold00002 97451 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 97458 1 . C scaffold11212 ScafM SNP 0001.scaffold00002 97487 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 97489 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 97506 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 97536 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 97556 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 97576 1 A G scaffold11212 ReadM SNP 0001.scaffold00002 97905 1 T C - ReadM SNP 0001.scaffold00002 97922 1 A G - ReadM SNP 0001.scaffold00002 97926 1 T C - ReadM SNP 0001.scaffold00002 97958 1 C T - ReadM SNP 0001.scaffold00002 97960 1 C T - ReadM SNP 0001.scaffold00002 98010 1 A G - Both SNP 0001.scaffold00002 98156 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 98167 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 98192 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 98198 1 A C scaffold11212 ReadM SNP 0001.scaffold00002 98335 1 G A - ReadM SNP 0001.scaffold00002 98343 1 C T - ReadM SNP 0001.scaffold00002 98372 1 A G - ReadM SNP 0001.scaffold00002 98445 1 G A - ReadM SNP 0001.scaffold00002 98448 1 A C - Both SNP 0001.scaffold00002 98476 1 A G scaffold11212 Both INDEL 0001.scaffold00002 98490 1 . T scaffold11212 Both SNP 0001.scaffold00002 98639 1 C T scaffold11212 Both SNP 0001.scaffold00002 98642 1 T C scaffold11212 Both INDEL 0001.scaffold00002 98672 1 T . scaffold11212 ReadM SNP 0001.scaffold00002 99014 1 C T - ScafM INDEL 0001.scaffold00002 99127 10 .......... TATGACTTTT scaffold11212 ScafM SNP 0001.scaffold00002 99166 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 99178 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 99228 4 .... AGAT scaffold11212 ScafM SNP 0001.scaffold00002 99238 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 99241 1 A T scaffold11212 Both INDEL 0001.scaffold00002 99288 1 T . scaffold11212 Both SNP 0001.scaffold00002 99350 1 T C scaffold11212 Both SNP 0001.scaffold00002 99389 1 C T scaffold11212 Both SNP 0001.scaffold00002 99412 1 A T scaffold11212 ReadM INDEL 0001.scaffold00002 99427 1 . C - ReadM SNP 0001.scaffold00002 99522 1 G C - ReadM SNP 0001.scaffold00002 99549 1 G A - ReadM SNP 0001.scaffold00002 99556 1 C T - ReadM SNP 0001.scaffold00002 99592 1 A G - ReadM SNP 0001.scaffold00002 99651 1 G A - ReadM SNP 0001.scaffold00002 99673 1 C T - ReadM SNP 0001.scaffold00002 99732 1 T C - ReadM SNP 0001.scaffold00002 99806 1 A G - ReadM SNP 0001.scaffold00002 99856 1 C G - ReadM SNP 0001.scaffold00002 99861 1 A G - ReadM SNP 0001.scaffold00002 99903 1 A C - ReadM SNP 0001.scaffold00002 100274 1 C T - ReadM SNP 0001.scaffold00002 100344 1 A G - ScafM SNP 0001.scaffold00002 100700 1 A G scaffold11212 Both SNP 0001.scaffold00002 100739 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 100792 1 C T scaffold11212 Both SNP 0001.scaffold00002 100797 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 100870 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 100888 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 101401 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 101417 6 ...... ATACCT scaffold11212 ScafM INDEL 0001.scaffold00002 101419 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 101425 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 101461 7 CCCCAGA ....... scaffold11212 ReadM SNP 0001.scaffold00002 101965 1 A G - ReadM SNP 0001.scaffold00002 101976 1 T C - ReadM SNP 0001.scaffold00002 102296 1 C T - ReadM SNP 0001.scaffold00002 102307 1 A C - ReadM SNP 0001.scaffold00002 102340 1 A C - ReadM SNP 0001.scaffold00002 102389 1 A G - ReadM SNP 0001.scaffold00002 102433 1 G T - ReadM SNP 0001.scaffold00002 102471 1 C T - ReadM SNP 0001.scaffold00002 102484 1 A G - ReadM SNP 0001.scaffold00002 102589 1 T G - ReadM SNP 0001.scaffold00002 102665 1 A G - ReadM SNP 0001.scaffold00002 102702 1 A G - ReadM SNP 0001.scaffold00002 102710 1 G A - ReadM SNP 0001.scaffold00002 102758 1 C T - ReadM SNP 0001.scaffold00002 102823 1 A T - ReadM SNP 0001.scaffold00002 102864 1 G A - ReadM SNP 0001.scaffold00002 102999 1 T G - ReadM SNP 0001.scaffold00002 103051 1 G A - ReadM SNP 0001.scaffold00002 103121 1 A G - ReadM SNP 0001.scaffold00002 103309 1 C G - ReadM SNP 0001.scaffold00002 103313 1 G A - ReadM SNP 0001.scaffold00002 103343 1 G A - ReadM SNP 0001.scaffold00002 103533 1 G A - ReadM SNP 0001.scaffold00002 103577 1 C T - ReadM SNP 0001.scaffold00002 103618 1 A G - ReadM SNP 0001.scaffold00002 103637 1 C G - ReadM SNP 0001.scaffold00002 103657 1 C A - ReadM SNP 0001.scaffold00002 103729 1 G C - ReadM SNP 0001.scaffold00002 103818 1 A G - ReadM SNP 0001.scaffold00002 103870 1 C A - ReadM SNP 0001.scaffold00002 103940 1 A G - ReadM SNP 0001.scaffold00002 103954 1 G A - ReadM SNP 0001.scaffold00002 103986 1 A G - ReadM SNP 0001.scaffold00002 104136 1 T A - ReadM SNP 0001.scaffold00002 104146 1 C T - ReadM SNP 0001.scaffold00002 104184 1 T C - ReadM SNP 0001.scaffold00002 104377 1 C T - ReadM SNP 0001.scaffold00002 104408 1 G T - ReadM SNP 0001.scaffold00002 104415 1 T C - ReadM SNP 0001.scaffold00002 104439 1 T C - ReadM SNP 0001.scaffold00002 104466 1 C T - ReadM SNP 0001.scaffold00002 104548 1 T C - ReadM SNP 0001.scaffold00002 104555 1 G T - ReadM SNP 0001.scaffold00002 104759 1 A G - ReadM SNP 0001.scaffold00002 104763 1 C T - ReadM SNP 0001.scaffold00002 104797 1 C A - ReadM SNP 0001.scaffold00002 104813 1 G C - ReadM SNP 0001.scaffold00002 104839 1 T G - ReadM SNP 0001.scaffold00002 104895 1 A G - ReadM SNP 0001.scaffold00002 104951 1 T C - ReadM SNP 0001.scaffold00002 104956 1 T C - ReadM SNP 0001.scaffold00002 104977 1 T C - ReadM SNP 0001.scaffold00002 105114 1 G T - ReadM SNP 0001.scaffold00002 105183 1 A C - ReadM INDEL 0001.scaffold00002 105220 1 . T - ReadM SNP 0001.scaffold00002 105239 1 T C - ReadM SNP 0001.scaffold00002 105391 1 T C - ReadM SNP 0001.scaffold00002 105399 1 G A - ReadM SNP 0001.scaffold00002 105420 1 A T - ReadM SNP 0001.scaffold00002 105456 1 A G - ReadM SNP 0001.scaffold00002 105530 1 T G - ReadM SNP 0001.scaffold00002 105537 1 A G - ReadM SNP 0001.scaffold00002 105716 1 C G - ReadM SNP 0001.scaffold00002 105777 1 T C - ReadM SNP 0001.scaffold00002 105820 1 A G - ReadM SNP 0001.scaffold00002 105898 1 T C - ReadM SNP 0001.scaffold00002 105951 1 T C - ReadM SNP 0001.scaffold00002 105994 1 A G - ReadM SNP 0001.scaffold00002 106091 1 C A - ReadM SNP 0001.scaffold00002 106140 1 T C - ReadM SNP 0001.scaffold00002 106178 1 A G - ReadM SNP 0001.scaffold00002 106243 1 G A - ReadM SNP 0001.scaffold00002 106253 1 A G - ReadM SNP 0001.scaffold00002 106322 1 T C - ReadM SNP 0001.scaffold00002 106384 1 T C - ReadM SNP 0001.scaffold00002 106395 1 C T - ReadM SNP 0001.scaffold00002 106502 1 C G - ReadM SNP 0001.scaffold00002 106635 1 G A - ReadM SNP 0001.scaffold00002 106840 1 A G - ReadM SNP 0001.scaffold00002 106854 1 T C - ReadM SNP 0001.scaffold00002 106954 1 G A - ReadM SNP 0001.scaffold00002 106972 1 A G - Both SNP 0001.scaffold00002 107012 1 G A scaffold11212 Both INDEL 0001.scaffold00002 107016 1 . T scaffold11212 Both SNP 0001.scaffold00002 107081 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 107104 1 A T scaffold11212 ReadM SNP 0001.scaffold00002 107540 1 G T - ReadM INDEL 0001.scaffold00002 107554 1 . C - ReadM SNP 0001.scaffold00002 107745 1 T A - ReadM SNP 0001.scaffold00002 107783 1 A T - ScafM SNP 0001.scaffold00002 108008 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 108011 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 108012 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 108043 1 C G scaffold11212 ReadM SNP 0001.scaffold00002 108115 1 A G - ReadM SNP 0001.scaffold00002 108132 1 T C - Both SNP 0001.scaffold00002 108461 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 108572 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 108597 4 .... ATAT scaffold11212 Both INDEL 0001.scaffold00002 108791 1 C . scaffold11212 Both SNP 0001.scaffold00002 108836 1 G A scaffold11212 Both INDEL 0001.scaffold00002 109101 2 TT .. scaffold11212 Both INDEL 0001.scaffold00002 109179 1 . G scaffold11212 Both SNP 0001.scaffold00002 109205 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 109265 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 109268 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 109276 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 109285 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 109289 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 109306 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 109345 7 ....... CAAAGTG scaffold11212 ScafM SNP 0001.scaffold00002 109350 1 T A scaffold11212 ScafM INDEL 0001.scaffold00002 109358 3 ... AGT scaffold11212 ScafM INDEL 0001.scaffold00002 109361 2 .. TA scaffold11212 ScafM SNP 0001.scaffold00002 109363 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 109364 2 .. CT scaffold11212 ScafM INDEL 0001.scaffold00002 109506 1 . T scaffold11212 Both SNP 0001.scaffold00002 109530 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 109650 2 AA .. scaffold11212 ScafM SNP 0001.scaffold00002 109777 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 109782 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 109788 1 T A scaffold11212 Both SNP 0001.scaffold00002 109820 1 G A scaffold11212 Both SNP 0001.scaffold00002 109909 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 109913 2 .. AA scaffold11212 Both SNP 0001.scaffold00002 109999 1 G C scaffold11212 Both SNP 0001.scaffold00002 110035 1 G A scaffold11212 Both INDEL 0001.scaffold00002 110064 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 110376 1 C G scaffold11212 ScafM INDEL 0001.scaffold00002 110380 4 AAGC .... scaffold11212 ScafM INDEL 0001.scaffold00002 110400 2 TG .. scaffold11212 ScafM SNP 0001.scaffold00002 110405 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 110431 1 . C scaffold11212 Both INDEL 0001.scaffold00002 110536 1 . T scaffold11212 Both SNP 0001.scaffold00002 110607 1 A T scaffold11212 ScafM INDEL 0001.scaffold00002 110810 1 . A scaffold11212 Both SNP 0001.scaffold00002 110826 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 110849 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 110901 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 110903 5 ..... TTTTT scaffold11212 ScafM SNP 0001.scaffold00002 110907 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 110920 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 110979 1 . A scaffold11212 ScafM INDEL 0001.scaffold00002 110982 10 .......... TTTAAATTTA scaffold11212 ScafM INDEL 0001.scaffold00002 110987 1 . G scaffold11212 ScafM SNP 0001.scaffold00002 111015 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 111055 2 AG GA scaffold11212 ScafM INDEL 0001.scaffold00002 111101 6 ...... ATTAAA scaffold11212 ScafM SNP 0001.scaffold00002 111110 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 111116 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 111128 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 111139 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 111153 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 111159 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 111172 1 . G scaffold11212 ScafM INDEL 0001.scaffold00002 111174 4 .... GCAA scaffold11212 ScafM SNP 0001.scaffold00002 111178 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 111193 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 111506 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 111534 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 111584 2 CC AG scaffold11212 ScafM INDEL 0001.scaffold00002 111588 1 . A scaffold11212 ScafM INDEL 0001.scaffold00002 111590 2 .. CG scaffold11212 ScafM SNP 0001.scaffold00002 111592 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 111593 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 111600 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 111615 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 111641 3 ... ATT scaffold11212 ScafM SNP 0001.scaffold00002 111647 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 111651 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 111657 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 111668 2 CA TG scaffold11212 ScafM SNP 0001.scaffold00002 111683 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 112014 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 112031 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 112070 22 GATTGATTTTATTTTATTGTAC ...................... scaffold11212 ScafM SNP 0001.scaffold00002 112115 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 112119 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 112137 4 TGTT .... scaffold11212 ScafM INDEL 0001.scaffold00002 112145 4 GTGA .... scaffold11212 ScafM INDEL 0001.scaffold00002 112153 12 TCTAATAAATGT ............ scaffold11212 ScafM INDEL 0001.scaffold00002 112166 6 TTTATT ...... scaffold11212 ScafM INDEL 0001.scaffold00002 112173 1 T . scaffold11212 ScafM SNP 0001.scaffold00002 112193 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 112197 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 112201 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 112259 1 G A scaffold11212 Both SNP 0001.scaffold00002 112266 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 112326 1 T A scaffold11212 Both SNP 0001.scaffold00002 112457 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 112507 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 112527 1 . A scaffold11212 ScafM INDEL 0001.scaffold00002 112530 1 T . scaffold11212 Both INDEL 0001.scaffold00002 112618 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 112693 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 112701 1 . A scaffold11212 ScafM SNP 0001.scaffold00002 112703 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 112705 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 112708 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 112746 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 112748 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 112750 2 CT .. scaffold11212 ScafM SNP 0001.scaffold00002 112753 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 112756 1 A . scaffold11212 ScafM SNP 0001.scaffold00002 112811 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 112867 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 112878 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 112880 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 112923 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 112931 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 112934 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 113182 2 TA CC scaffold11212 ScafM SNP 0001.scaffold00002 113192 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 113203 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 113370 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 113378 1 C T scaffold11212 ScafM INDEL 0001.scaffold00002 113426 19 TTAGTTTATCTTAAATGTA ................... scaffold11212 Both SNP 0001.scaffold00002 113618 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 113812 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 113948 1 T A scaffold11212 Both SNP 0001.scaffold00002 114299 1 G T scaffold11212 Both SNP 0001.scaffold00002 114367 1 T A scaffold11212 Both INDEL 0001.scaffold00002 114529 1 . T scaffold11212 ScafM INDEL 0001.scaffold00002 114581 2 CA .. scaffold11212 ScafM SNP 0001.scaffold00002 114592 1 A T scaffold11212 ScafM SNP 0001.scaffold00002 114607 1 T C scaffold11212 ReadM SNP 0001.scaffold00002 114721 1 C T - ReadM SNP 0001.scaffold00002 114780 1 C G - Both SNP 0001.scaffold00002 114807 1 T A scaffold11212 Both SNP 0001.scaffold00002 114875 1 C T scaffold11212 Both SNP 0001.scaffold00002 114878 1 T G scaffold11212 ReadM SNP 0001.scaffold00002 114909 1 A G - ReadM SNP 0001.scaffold00002 115163 1 G A - Both SNP 0001.scaffold00002 115221 1 G A scaffold11212 Both SNP 0001.scaffold00002 115320 1 C A scaffold11212 ReadM SNP 0001.scaffold00002 115441 1 A C - ReadM SNP 0001.scaffold00002 115482 1 C T - ReadM SNP 0001.scaffold00002 115560 1 A G - ReadM SNP 0001.scaffold00002 115640 1 C T - Both SNP 0001.scaffold00002 115809 1 C A scaffold11212 Both SNP 0001.scaffold00002 115864 1 T G scaffold11212 ScafM SNP 0001.scaffold00002 116117 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 116135 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 116161 1 G C scaffold11212 ScafM INDEL 0001.scaffold00002 116212 6 TGTTTT ...... scaffold11212 ScafM SNP 0001.scaffold00002 116220 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 116266 1 G C scaffold11212 ScafM SNP 0001.scaffold00002 116316 1 C T scaffold11212 ScafM SNP 0001.scaffold00002 116320 1 A C scaffold11212 ScafM SNP 0001.scaffold00002 116511 1 C A scaffold11212 ReadM SNP 0001.scaffold00002 116645 1 C T - ReadM SNP 0001.scaffold00002 116705 1 A G - ReadM SNP 0001.scaffold00002 116710 1 C T - ReadM SNP 0001.scaffold00002 116882 1 A T - Both SNP 0001.scaffold00002 117004 1 A C scaffold11212 Both SNP 0001.scaffold00002 117006 1 A G scaffold11212 ReadM SNP 0001.scaffold00002 117100 1 C G - ReadM INDEL 0001.scaffold00002 117166 1 T . - Both SNP 0001.scaffold00002 117203 1 A C scaffold11212 ReadM SNP 0001.scaffold00002 117368 1 C T - ReadM SNP 0001.scaffold00002 117400 1 G T - ReadM SNP 0001.scaffold00002 117408 1 A T - ReadM SNP 0001.scaffold00002 117504 1 A C - Both SNP 0001.scaffold00002 117549 1 A G scaffold11212 Both SNP 0001.scaffold00002 117571 1 T C scaffold11212 Both SNP 0001.scaffold00002 117580 1 G A scaffold11212 ReadM INDEL 0001.scaffold00002 117779 1 C . - ReadM SNP 0001.scaffold00002 117910 1 G A - ReadM SNP 0001.scaffold00002 117944 1 G T - ReadM INDEL 0001.scaffold00002 117962 1 . A - Both SNP 0001.scaffold00002 118219 1 C T scaffold11212 Both SNP 0001.scaffold00002 118507 1 A C scaffold11212 ReadM SNP 0001.scaffold00002 118738 1 C T - ReadM SNP 0001.scaffold00002 118754 1 T C - ReadM SNP 0001.scaffold00002 118813 1 T C - ReadM SNP 0001.scaffold00002 118818 1 G A - Both SNP 0001.scaffold00002 118980 1 C T scaffold11212 Both SNP 0001.scaffold00002 119539 1 A T scaffold11212 Both SNP 0001.scaffold00002 119642 1 A G scaffold11212 Both SNP 0001.scaffold00002 119663 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 119759 3 ... AAA scaffold11212 ScafM INDEL 0001.scaffold00002 119811 1 . T scaffold11212 Both SNP 0001.scaffold00002 120095 1 G T scaffold11212 Both SNP 0001.scaffold00002 120152 1 C T scaffold11212 Both SNP 0001.scaffold00002 120206 1 T A scaffold11212 Both SNP 0001.scaffold00002 120282 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 120351 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 120352 1 . T scaffold11212 ScafM INDEL 0001.scaffold00002 120370 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 120375 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 120400 3 ATT ... scaffold11212 Both SNP 0001.scaffold00002 120551 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 120685 5 ..... CGATC scaffold11212 ScafM INDEL 0001.scaffold00002 120725 5 ..... TAATT scaffold11212 ScafM INDEL 0001.scaffold00002 120769 8 ........ TACTGGTC scaffold11212 ScafM INDEL 0001.scaffold00002 120774 3 ... GTT scaffold11212 ScafM SNP 0001.scaffold00002 120778 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 120812 2 TT CG scaffold11212 ScafM SNP 0001.scaffold00002 120820 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 120831 1 . G scaffold11212 Both SNP 0001.scaffold00002 120967 1 T C scaffold11212 ScafM INDEL 0001.scaffold00002 121041 3 ATC ... scaffold11212 ScafM SNP 0001.scaffold00002 121079 1 C G scaffold11212 ScafM INDEL 0001.scaffold00002 121089 4 .... TTAA scaffold11212 ScafM SNP 0001.scaffold00002 121104 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 121119 5 ..... CGATC scaffold11212 ScafM SNP 0001.scaffold00002 121121 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 121122 3 ... TAA scaffold11212 ScafM SNP 0001.scaffold00002 121193 2 AA GT scaffold11212 ScafM SNP 0001.scaffold00002 121200 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 121233 9 .....AGGG TCCCCTTCC scaffold11212 ScafM INDEL 0001.scaffold00002 121280 2 GA .. scaffold11212 ScafM INDEL 0001.scaffold00002 121321 13 CAAACCCGATATG ............. scaffold11212 ScafM INDEL 0001.scaffold00002 121336 3 ATA ... scaffold11212 ScafM INDEL 0001.scaffold00002 121381 3 ... ACT scaffold11212 ScafM SNP 0001.scaffold00002 121383 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 121404 1 A C scaffold11212 Both SNP 0001.scaffold00002 121416 1 C T scaffold11212 Both SNP 0001.scaffold00002 121545 1 T A scaffold11212 ScafM SNP 0001.scaffold00002 121576 2 TG GA scaffold11212 ScafM SNP 0001.scaffold00002 121579 1 T G scaffold11212 ScafM INDEL 0001.scaffold00002 121582 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 121584 1 C G scaffold11212 ScafM SNP 0001.scaffold00002 121690 1 A C scaffold11212 ScafM INDEL 0001.scaffold00002 121705 5 GTTAC ..... scaffold11212 ScafM SNP 0001.scaffold00002 121799 1 G A scaffold11212 ScafM INDEL 0001.scaffold00002 121827 2 TG .. scaffold11212 ScafM SNP 0001.scaffold00002 121845 1 A C scaffold11212 ScafM INDEL 0001.scaffold00002 121851 1 . G scaffold11212 ScafM INDEL 0001.scaffold00002 121858 5 ..... GTGAT scaffold11212 ScafM INDEL 0001.scaffold00002 121863 5 ..... TTGCC scaffold11212 ScafM SNP 0001.scaffold00002 121865 1 G T scaffold11212 ScafM INDEL 0001.scaffold00002 121867 3 ... TAA scaffold11212 ScafM INDEL 0001.scaffold00002 121868 3 ... TCT scaffold11212 ScafM INDEL 0001.scaffold00002 121871 1 . T scaffold11212 ScafM SNP 0001.scaffold00002 121885 1 A G scaffold11212 ScafM INDEL 0001.scaffold00002 121893 1 G . scaffold11212 ScafM SNP 0001.scaffold00002 121918 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 121928 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 121938 1 G A scaffold11212 ScafM SNP 0001.scaffold00002 121952 1 A G scaffold11212 ScafM SNP 0001.scaffold00002 121992 1 G T scaffold11212 ScafM SNP 0001.scaffold00002 122000 1 C A scaffold11212 ScafM SNP 0001.scaffold00002 122033 2 CC TG scaffold11212 ScafM SNP 0001.scaffold00002 122067 1 T C scaffold11212 ScafM SNP 0001.scaffold00002 122911 1 C G scaffold21094 ScafM SNP 0001.scaffold00002 122917 1 A C scaffold21094 ScafM SNP 0001.scaffold00002 122958 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 122982 1 G A scaffold21094 ScafM SNP 0001.scaffold00002 123014 1 C T scaffold21094 ScafM INDEL 0001.scaffold00002 123044 4 .... TATA scaffold21094 ScafM SNP 0001.scaffold00002 123105 1 G A scaffold21094 ScafM SNP 0001.scaffold00002 123119 1 T C scaffold21094 ScafM INDEL 0001.scaffold00002 123184 1 G . scaffold21094 ScafM SNP 0001.scaffold00002 123238 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 126294 1 G C scaffold1109 ScafM SNP 0001.scaffold00002 126304 1 T G scaffold1109 ScafM SNP 0001.scaffold00002 126315 1 G A scaffold1109 ScafM SNP 0001.scaffold00002 126396 1 G T scaffold1109 ScafM SNP 0001.scaffold00002 126432 1 T C scaffold1109 ScafM SNP 0001.scaffold00002 126490 1 T G scaffold1109 ScafM SNP 0001.scaffold00002 126521 1 T C scaffold1109 ScafM SNP 0001.scaffold00002 126556 2 AG TT scaffold1109 ScafM SNP 0001.scaffold00002 126586 1 C T scaffold1109 ScafM SNP 0001.scaffold00002 126715 1 C G scaffold1109 ScafM SNP 0001.scaffold00002 126893 1 T C scaffold1109 ScafM INDEL 0001.scaffold00002 126907 1 T . scaffold1109 ScafM SNP 0001.scaffold00002 126990 1 C G scaffold1109 ScafM INDEL 0001.scaffold00002 127039 1 A . scaffold1109 ScafM SNP 0001.scaffold00002 127041 1 A G scaffold1109 ScafM SNP 0001.scaffold00002 129749 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 129772 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 129777 1 G A scaffold21094 ScafM SNP 0001.scaffold00002 129811 1 G C scaffold21094 ScafM SNP 0001.scaffold00002 129825 1 T A scaffold21094 ScafM SNP 0001.scaffold00002 129831 1 A T scaffold21094 ScafM SNP 0001.scaffold00002 129846 1 A C scaffold21094 ScafM SNP 0001.scaffold00002 129900 1 A T scaffold21094 ScafM SNP 0001.scaffold00002 129908 1 T C scaffold21094 ScafM INDEL 0001.scaffold00002 129920 1 C . scaffold21094 ScafM SNP 0001.scaffold00002 129922 1 C T scaffold21094 ScafM INDEL 0001.scaffold00002 129949 3 TAA ... scaffold21094 ScafM SNP 0001.scaffold00002 129988 1 T A scaffold21094 ScafM SNP 0001.scaffold00002 129991 1 G A scaffold21094 ScafM INDEL 0001.scaffold00002 130107 1 . G scaffold21094 Both SNP 0001.scaffold00002 130190 1 A C scaffold21094 Both SNP 0001.scaffold00002 130222 1 T C scaffold21094 Both SNP 0001.scaffold00002 130255 1 A G scaffold21094 Both SNP 0001.scaffold00002 130268 1 T C scaffold21094 ReadM SNP 0001.scaffold00002 130364 1 G A - ReadM SNP 0001.scaffold00002 130375 1 T C - ReadM SNP 0001.scaffold00002 130479 1 T A - ReadM SNP 0001.scaffold00002 130490 1 T C - ReadM SNP 0001.scaffold00002 130529 1 A T - ReadM SNP 0001.scaffold00002 130643 1 C G - ReadM SNP 0001.scaffold00002 130674 1 T G - ScafM SNP 0001.scaffold00002 131607 1 T A scaffold21094 ScafM SNP 0001.scaffold00002 131610 1 T A scaffold21094 ScafM INDEL 0001.scaffold00002 131646 3 AAA ... scaffold21094 ScafM SNP 0001.scaffold00002 131665 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 131721 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 131738 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 131764 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 131814 1 C T scaffold21094 ScafM SNP 0001.scaffold00002 131819 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 131876 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 131901 1 T C scaffold21094 Both SNP 0001.scaffold00002 131966 1 G A scaffold21094 Both SNP 0001.scaffold00002 132057 1 T C scaffold21094 Both SNP 0001.scaffold00002 132063 1 G A scaffold21094 Both SNP 0001.scaffold00002 132080 1 G C scaffold21094 Both SNP 0001.scaffold00002 132144 1 C A scaffold21094 Both SNP 0001.scaffold00002 132195 1 A G scaffold21094 Both SNP 0001.scaffold00002 132280 1 G A scaffold21094 Both SNP 0001.scaffold00002 132298 1 T A scaffold21094 Both SNP 0001.scaffold00002 132309 1 G T scaffold21094 ScafM INDEL 0001.scaffold00002 132462 4 TTAC .... scaffold21094 ScafM SNP 0001.scaffold00002 132491 1 C A scaffold21094 Both SNP 0001.scaffold00002 132517 1 A T scaffold21094 Both SNP 0001.scaffold00002 132563 1 G A scaffold21094 Both SNP 0001.scaffold00002 132582 1 A G scaffold21094 Both SNP 0001.scaffold00002 132598 1 A C scaffold21094 ScafM SNP 0001.scaffold00002 132635 1 A T scaffold21094 ScafM INDEL 0001.scaffold00002 132643 1 . T scaffold21094 ScafM SNP 0001.scaffold00002 132658 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 132690 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 132706 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 132716 1 T G scaffold21094 ScafM SNP 0001.scaffold00002 132719 1 T A scaffold21094 ScafM SNP 0001.scaffold00002 132721 1 A G scaffold21094 Both SNP 0001.scaffold00002 132747 1 G A scaffold21094 Both SNP 0001.scaffold00002 132767 1 G T scaffold21094 Both SNP 0001.scaffold00002 132789 1 A G scaffold21094 ScafM INDEL 0001.scaffold00002 132855 4 .... GATT scaffold21094 Both SNP 0001.scaffold00002 132878 1 G C scaffold21094 ReadM SNP 0001.scaffold00002 132956 1 C T - ReadM SNP 0001.scaffold00002 132964 1 C G - ReadM SNP 0001.scaffold00002 133048 1 C T - ReadM SNP 0001.scaffold00002 133097 1 C T - ReadM SNP 0001.scaffold00002 133123 1 A G - ReadM SNP 0001.scaffold00002 133187 1 A G - ReadM SNP 0001.scaffold00002 133296 1 G A - ReadM SNP 0001.scaffold00002 133355 1 T C - ReadM SNP 0001.scaffold00002 133371 1 T A - ReadM SNP 0001.scaffold00002 133380 1 T C - ReadM SNP 0001.scaffold00002 133477 1 G A - ReadM SNP 0001.scaffold00002 133607 1 T C - ReadM SNP 0001.scaffold00002 133636 1 G C - ReadM SNP 0001.scaffold00002 133738 1 T C - ReadM SNP 0001.scaffold00002 133897 1 G A - Both SNP 0001.scaffold00002 135921 1 C G scaffold21094 Both SNP 0001.scaffold00002 136060 1 C G scaffold21094 ReadM SNP 0001.scaffold00002 136148 1 T C - ReadM SNP 0001.scaffold00002 136238 1 T C - ReadM SNP 0001.scaffold00002 136241 1 G A - ReadM SNP 0001.scaffold00002 136268 1 G C - ReadM SNP 0001.scaffold00002 136310 1 A G - ReadM SNP 0001.scaffold00002 136335 1 A G - ReadM SNP 0001.scaffold00002 136436 1 G A - ReadM SNP 0001.scaffold00002 136478 1 T A - ReadM SNP 0001.scaffold00002 136552 1 C T - ReadM SNP 0001.scaffold00002 136618 1 C G - ReadM SNP 0001.scaffold00002 136687 1 G A - ReadM SNP 0001.scaffold00002 136737 1 G A - ReadM SNP 0001.scaffold00002 136765 1 G T - ReadM SNP 0001.scaffold00002 136788 1 G A - ReadM SNP 0001.scaffold00002 136804 1 T C - ReadM SNP 0001.scaffold00002 136811 1 A G - ReadM SNP 0001.scaffold00002 136956 1 G A - ReadM SNP 0001.scaffold00002 136982 1 A G - ReadM SNP 0001.scaffold00002 137022 1 C T - Both SNP 0001.scaffold00002 137059 1 A T scaffold21094 Both SNP 0001.scaffold00002 137203 1 T C scaffold21094 Both SNP 0001.scaffold00002 137275 1 T C scaffold21094 Both SNP 0001.scaffold00002 137286 1 T G scaffold21094 Both SNP 0001.scaffold00002 137325 1 T C scaffold21094 ScafM INDEL 0001.scaffold00002 137400 3 TCA ... scaffold21094 ScafM SNP 0001.scaffold00002 137413 1 C T scaffold21094 Both SNP 0001.scaffold00002 137521 1 G A scaffold21094 Both SNP 0001.scaffold00002 137681 1 G A scaffold21094 Both INDEL 0001.scaffold00002 137690 1 . T scaffold21094 Both SNP 0001.scaffold00002 137714 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 137844 1 T C scaffold21094 ReadM SNP 0001.scaffold00002 137999 1 G T - ScafM SNP 0001.scaffold00002 138219 1 A T scaffold21094 ScafM SNP 0001.scaffold00002 138298 1 T C scaffold21094 Both SNP 0001.scaffold00002 138648 1 A G scaffold21094 Both SNP 0001.scaffold00002 138754 1 A C scaffold21094 Both INDEL 0001.scaffold00002 138763 2 .. GC scaffold21094 Both SNP 0001.scaffold00002 138847 1 G A scaffold21094 Both SNP 0001.scaffold00002 138935 1 A C scaffold21094 Both INDEL 0001.scaffold00002 139139 3 TAT ... scaffold21094 ScafM SNP 0001.scaffold00002 139199 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 139206 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 139261 1 C T scaffold21094 ScafM INDEL 0001.scaffold00002 139280 9 ......... ACTGTCTAC scaffold21094 ScafM SNP 0001.scaffold00002 139398 1 T G scaffold21094 ScafM SNP 0001.scaffold00002 139424 1 A G scaffold21094 ScafM INDEL 0001.scaffold00002 139436 1 T . scaffold21094 ScafM SNP 0001.scaffold00002 139526 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 139551 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 140769 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 140872 1 T C scaffold21094 ScafM SNP 0001.scaffold00002 140930 1 T G scaffold21094 ScafM SNP 0001.scaffold00002 141009 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 141054 1 G A scaffold21094 ScafM SNP 0001.scaffold00002 141065 2 GG AA scaffold21094 ScafM SNP 0001.scaffold00002 141086 1 C T scaffold21094 ScafM INDEL 0001.scaffold00002 141400 1 C . scaffold21094 Both SNP 0001.scaffold00002 141518 1 A G scaffold21094 ReadM SNP 0001.scaffold00002 141570 1 A G - ReadM SNP 0001.scaffold00002 141583 1 G A - ScafM SNP 0001.scaffold00002 141853 1 G A scaffold21094 ScafM SNP 0001.scaffold00002 141868 1 C T scaffold21094 ScafM SNP 0001.scaffold00002 141994 1 A G scaffold21094 ScafM SNP 0001.scaffold00002 142069 1 T G scaffold21094 ScafM SNP 0001.scaffold00002 142412 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 142420 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 142507 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 142520 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 142558 1 . T scaffold21444 ScafM SNP 0001.scaffold00002 142600 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 142630 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 142637 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 142672 1 . A scaffold21444 ScafM SNP 0001.scaffold00002 142748 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 142756 1 C T scaffold21444 ScafM INDEL 0001.scaffold00002 142802 1 . T scaffold21444 ScafM SNP 0001.scaffold00002 142856 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 142939 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 142988 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 143007 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 143016 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 143026 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 143029 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 143089 1 C G scaffold21444 ScafM INDEL 0001.scaffold00002 143094 7 ....... TTGCAAG scaffold21444 ScafM SNP 0001.scaffold00002 143134 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 143138 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 143158 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 143162 1 C G scaffold21444 Both SNP 0001.scaffold00002 143237 1 C T scaffold21444 Both SNP 0001.scaffold00002 143242 1 G C scaffold21444 Both SNP 0001.scaffold00002 143301 1 C T scaffold21444 Both INDEL 0001.scaffold00002 143356 1 C . scaffold21444 Both SNP 0001.scaffold00002 143439 1 T A scaffold21444 Both SNP 0001.scaffold00002 143505 1 C T scaffold21444 Both INDEL 0001.scaffold00002 143698 1 G . scaffold21444 Both SNP 0001.scaffold00002 143752 1 G A scaffold21444 ReadM INDEL 0001.scaffold00002 143974 1 T . - ReadM INDEL 0001.scaffold00002 144014 1 G . - ReadM INDEL 0001.scaffold00002 144015 1 T . - Both SNP 0001.scaffold00002 144130 1 G C scaffold21444 Both SNP 0001.scaffold00002 144185 1 C T scaffold21444 Both INDEL 0001.scaffold00002 144327 1 . A scaffold21444 ReadM SNP 0001.scaffold00002 144527 1 T C - Both INDEL 0001.scaffold00002 144582 1 G . scaffold21444 Both SNP 0001.scaffold00002 144594 1 A G scaffold21444 Both SNP 0001.scaffold00002 144696 1 T C scaffold21444 Both SNP 0001.scaffold00002 144713 1 T G scaffold21444 Both SNP 0001.scaffold00002 144720 1 C A scaffold21444 Both SNP 0001.scaffold00002 144759 1 A C scaffold21444 Both SNP 0001.scaffold00002 144769 1 A T scaffold21444 Both SNP 0001.scaffold00002 144835 1 C T scaffold21444 Both SNP 0001.scaffold00002 144936 1 T A scaffold21444 Both SNP 0001.scaffold00002 144982 1 C T scaffold21444 Both SNP 0001.scaffold00002 145018 1 A T scaffold21444 Both SNP 0001.scaffold00002 145219 1 G A scaffold21444 Both SNP 0001.scaffold00002 145243 1 G A scaffold21444 Both SNP 0001.scaffold00002 145265 1 T A scaffold21444 Both SNP 0001.scaffold00002 145297 1 A G scaffold21444 Both SNP 0001.scaffold00002 145402 1 C A scaffold21444 ScafM INDEL 0001.scaffold00002 145457 4 .... CAAT scaffold21444 ScafM SNP 0001.scaffold00002 145465 1 C T scaffold21444 Both SNP 0001.scaffold00002 145490 1 C T scaffold21444 Both SNP 0001.scaffold00002 145582 1 C G scaffold21444 Both SNP 0001.scaffold00002 145612 1 C T scaffold21444 Both SNP 0001.scaffold00002 145772 1 T C scaffold21444 Both SNP 0001.scaffold00002 145854 1 C T scaffold21444 Both INDEL 0001.scaffold00002 145864 1 . T scaffold21444 Both SNP 0001.scaffold00002 146085 1 T C scaffold21444 Both SNP 0001.scaffold00002 146124 1 C G scaffold21444 Both SNP 0001.scaffold00002 146367 1 C T scaffold21444 ScafM INDEL 0001.scaffold00002 146592 4 .... TGTT scaffold21444 ScafM SNP 0001.scaffold00002 146593 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 146600 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 147477 1 C A scaffold21444 ScafM INDEL 0001.scaffold00002 147514 4 .... GTGA scaffold21444 ScafM SNP 0001.scaffold00002 147534 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 147547 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 147600 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 147607 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 147622 1 T A scaffold21444 ScafM INDEL 0001.scaffold00002 147639 5 ACCCA ...TG scaffold21444 ScafM INDEL 0001.scaffold00002 147673 1 C . scaffold21444 ScafM SNP 0001.scaffold00002 147675 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 147683 1 C G scaffold21444 ScafM INDEL 0001.scaffold00002 147690 1 A . scaffold21444 ScafM SNP 0001.scaffold00002 148014 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 148022 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 148051 1 C A scaffold21444 ScafM SNP 0001.scaffold00002 148065 1 T G scaffold21444 ScafM INDEL 0001.scaffold00002 148069 3 TAG ... scaffold21444 ScafM INDEL 0001.scaffold00002 148076 4 TTTT ...G scaffold21444 ScafM INDEL 0001.scaffold00002 148083 1 C . scaffold21444 ScafM INDEL 0001.scaffold00002 148085 1 T . scaffold21444 ScafM INDEL 0001.scaffold00002 148087 4 TTTT .... scaffold21444 ReadM SNP 0001.scaffold00002 148207 1 A G - ReadM SNP 0001.scaffold00002 148244 1 G A - ReadM SNP 0001.scaffold00002 148277 1 G A - ScafM SNP 0001.scaffold00002 148408 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 148419 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 148426 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 148452 1 C A scaffold21444 ScafM SNP 0001.scaffold00002 148461 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 148472 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 148530 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 148533 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 148562 1 G T scaffold21444 ScafM INDEL 0001.scaffold00002 148603 7 ....... TTCCCAA scaffold21444 ScafM SNP 0001.scaffold00002 148625 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 149321 2 AT GA scaffold4894 ScafM SNP 0001.scaffold00002 149327 1 G A scaffold4894 ScafM SNP 0001.scaffold00002 149359 1 T C scaffold4894 ScafM SNP 0001.scaffold00002 149370 1 A G scaffold4894 ScafM INDEL 0001.scaffold00002 149456 1 . A scaffold4894 ScafM SNP 0001.scaffold00002 149477 1 G A scaffold4894 ScafM SNP 0001.scaffold00002 149551 1 A G scaffold4894 ScafM SNP 0001.scaffold00002 149554 1 T C scaffold4894 ScafM INDEL 0001.scaffold00002 149564 1 G . scaffold4894 ScafM INDEL 0001.scaffold00002 149572 1 . A scaffold4894 ScafM SNP 0001.scaffold00002 149586 1 A G scaffold4894 ScafM SNP 0001.scaffold00002 149596 1 T C scaffold4894 ScafM INDEL 0001.scaffold00002 149785 1 T . scaffold21444 ScafM SNP 0001.scaffold00002 149817 1 G C scaffold21444 ScafM INDEL 0001.scaffold00002 149931 5 ..... TTTTT scaffold21444 ScafM SNP 0001.scaffold00002 149933 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 149937 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 149970 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 149987 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 150014 2 TT AA scaffold21444 ScafM SNP 0001.scaffold00002 150085 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 150114 2 TT AG scaffold21444 ScafM SNP 0001.scaffold00002 150121 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 150141 1 A G scaffold21444 ReadM SNP 0001.scaffold00002 150258 1 A G - ReadM SNP 0001.scaffold00002 150301 1 A G - Both SNP 0001.scaffold00002 150343 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 150408 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 150967 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 150993 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151074 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 151091 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 151119 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151139 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151156 2 GC AG scaffold21444 ScafM SNP 0001.scaffold00002 151186 1 C T scaffold21444 ScafM INDEL 0001.scaffold00002 151189 3 ... GAT scaffold21444 ScafM SNP 0001.scaffold00002 151194 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 151199 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 151217 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151223 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 151229 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 151231 1 . T scaffold21444 ScafM SNP 0001.scaffold00002 151247 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151262 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 151271 1 A C scaffold21444 ScafM SNP 0001.scaffold00002 151287 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 151296 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 151331 1 A C scaffold21444 ScafM SNP 0001.scaffold00002 151352 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151358 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151397 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151421 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151423 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151477 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151485 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 151514 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 151531 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 151540 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 151569 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 151571 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 151594 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 151601 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 151627 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 151630 1 G A scaffold21444 Both SNP 0001.scaffold00002 151667 1 T C scaffold21444 Both SNP 0001.scaffold00002 151735 1 A C scaffold21444 ScafM SNP 0001.scaffold00002 151780 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 151800 1 T C scaffold21444 Both SNP 0001.scaffold00002 151827 1 C T scaffold21444 Both SNP 0001.scaffold00002 151851 1 A C scaffold21444 Both SNP 0001.scaffold00002 151881 1 C A scaffold21444 Both SNP 0001.scaffold00002 151978 1 C T scaffold21444 Both SNP 0001.scaffold00002 151994 1 G A scaffold21444 Both SNP 0001.scaffold00002 152033 1 T G scaffold21444 Both SNP 0001.scaffold00002 152074 1 A G scaffold21444 Both SNP 0001.scaffold00002 152199 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 152210 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 152212 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 152239 40 ........................................ TTATGGTGGACCCAGGGGCCACCCATAATTTTATCTCTAC scaffold21444 ScafM INDEL 0001.scaffold00002 152241 2 .. AA scaffold21444 ScafM INDEL 0001.scaffold00002 152245 14 .............. TGCAGAGGTTACAA scaffold21444 ScafM SNP 0001.scaffold00002 152250 1 C T scaffold21444 Both SNP 0001.scaffold00002 152296 1 A G scaffold21444 Both SNP 0001.scaffold00002 152317 1 G C scaffold21444 ScafM INDEL 0001.scaffold00002 152441 3 ... TAA scaffold21444 ScafM SNP 0001.scaffold00002 152458 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 152461 1 C A scaffold21444 ScafM INDEL 0001.scaffold00002 152473 1 G . scaffold21444 ScafM SNP 0001.scaffold00002 152478 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 152520 1 C A scaffold21444 ScafM SNP 0001.scaffold00002 152524 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 152547 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 152578 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 152594 1 A C scaffold21444 ScafM SNP 0001.scaffold00002 152605 2 TG CA scaffold21444 ScafM SNP 0001.scaffold00002 152615 2 AG GT scaffold21444 ScafM SNP 0001.scaffold00002 152629 1 G T scaffold21444 Both SNP 0001.scaffold00002 152656 1 A G scaffold21444 ReadM SNP 0001.scaffold00002 152702 1 C T - ReadM SNP 0001.scaffold00002 152732 1 C T - ReadM SNP 0001.scaffold00002 152778 1 A C - ReadM SNP 0001.scaffold00002 152807 1 C T - ReadM SNP 0001.scaffold00002 153006 1 G A - ReadM SNP 0001.scaffold00002 153143 1 A G - Both SNP 0001.scaffold00002 153263 1 A G scaffold21444 Both INDEL 0001.scaffold00002 153319 1 A . scaffold21444 Both SNP 0001.scaffold00002 153381 1 G C scaffold21444 Both SNP 0001.scaffold00002 153473 1 A G scaffold21444 Both SNP 0001.scaffold00002 153519 1 C A scaffold21444 Both SNP 0001.scaffold00002 153529 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153551 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153555 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 153559 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 153574 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 153579 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 153584 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153651 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 153666 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 153677 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153696 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153701 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 153711 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 153776 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 153786 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 153795 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 153813 2 GT AG scaffold21444 Both SNP 0001.scaffold00002 153940 1 A G scaffold21444 Both SNP 0001.scaffold00002 153944 1 C T scaffold21444 Both SNP 0001.scaffold00002 153965 1 T C scaffold21444 ReadM INDEL 0001.scaffold00002 154028 1 A . - ScafM INDEL 0001.scaffold00002 154028 2 AG .T scaffold21444 Both SNP 0001.scaffold00002 154070 1 C T scaffold21444 ScafM INDEL 0001.scaffold00002 154082 4 ACAT .... scaffold21444 ScafM SNP 0001.scaffold00002 154134 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 154150 1 T A scaffold21444 ReadM SNP 0001.scaffold00002 154307 1 A G - ReadM SNP 0001.scaffold00002 154359 1 A G - ReadM SNP 0001.scaffold00002 154392 1 T A - ReadM SNP 0001.scaffold00002 154401 1 T C - ReadM SNP 0001.scaffold00002 154445 1 A T - ReadM SNP 0001.scaffold00002 154461 1 T C - ReadM SNP 0001.scaffold00002 154464 1 G A - ReadM SNP 0001.scaffold00002 154611 1 T C - ReadM SNP 0001.scaffold00002 154619 1 A G - ScafM SNP 0001.scaffold00002 154911 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 154930 1 G A scaffold21444 Both SNP 0001.scaffold00002 154948 1 A C scaffold21444 Both SNP 0001.scaffold00002 154988 1 G T scaffold21444 Both SNP 0001.scaffold00002 155019 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155060 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 155070 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155077 1 C G scaffold21444 ScafM SNP 0001.scaffold00002 155079 1 C G scaffold21444 ScafM SNP 0001.scaffold00002 155082 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155102 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 155141 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 155158 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 155160 1 C A scaffold21444 Both SNP 0001.scaffold00002 155221 1 A C scaffold21444 Both SNP 0001.scaffold00002 155272 1 G A scaffold21444 Both SNP 0001.scaffold00002 155290 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155312 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 155319 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155505 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155510 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155523 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155558 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155566 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 155594 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155649 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 155652 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 155658 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 155669 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 155690 2 TG CA scaffold21444 ScafM SNP 0001.scaffold00002 155693 1 A T scaffold21444 ReadM INDEL 0001.scaffold00002 155758 1 G . - ScafM SNP 0001.scaffold00002 155857 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 155888 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155922 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155932 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 155943 2 AC GT scaffold21444 ScafM SNP 0001.scaffold00002 155946 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 155952 1 T C scaffold21444 ScafM INDEL 0001.scaffold00002 155967 1 . A scaffold21444 ScafM SNP 0001.scaffold00002 155991 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 156015 2 TT CC scaffold21444 ScafM SNP 0001.scaffold00002 156045 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 156344 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 156362 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 156367 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 156385 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 156427 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 156451 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 156456 1 A C scaffold21444 ScafM INDEL 0001.scaffold00002 156472 2 .G AA scaffold21444 ScafM SNP 0001.scaffold00002 156507 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 156579 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 156590 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 156595 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 156599 2 CC TT scaffold21444 ScafM SNP 0001.scaffold00002 156612 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 156669 1 C A scaffold21444 ScafM INDEL 0001.scaffold00002 156684 7 ....... AATTTAG scaffold21444 ScafM INDEL 0001.scaffold00002 156687 2 .. AC scaffold21444 ScafM INDEL 0001.scaffold00002 156688 10 .......... AAAAAACTAA scaffold21444 ScafM INDEL 0001.scaffold00002 156690 4 .... GGGG scaffold21444 ScafM SNP 0001.scaffold00002 156693 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 156726 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 156792 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 156810 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 156821 1 A T scaffold21444 ScafM SNP 0001.scaffold00002 156827 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 156846 1 G C scaffold21444 ScafM SNP 0001.scaffold00002 156854 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 156865 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 156867 1 T G scaffold21444 ScafM SNP 0001.scaffold00002 156896 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 156937 1 C T scaffold21444 ScafM INDEL 0001.scaffold00002 156940 1 C . scaffold21444 ScafM SNP 0001.scaffold00002 156976 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 157011 1 G T scaffold21444 ScafM SNP 0001.scaffold00002 161439 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 161457 2 TT AG scaffold21444 ScafM SNP 0001.scaffold00002 161480 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 161507 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 161549 1 C A scaffold21444 ScafM SNP 0001.scaffold00002 161555 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 161590 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 161598 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 161605 1 . T scaffold21444 ScafM SNP 0001.scaffold00002 161634 1 C A scaffold21444 ScafM INDEL 0001.scaffold00002 161670 1 . T scaffold21444 ScafM SNP 0001.scaffold00002 161683 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 161703 1 G A scaffold21444 ScafM INDEL 0001.scaffold00002 161746 16 ATTAACCATGGCCCAA ................ scaffold21444 ScafM INDEL 0001.scaffold00002 161776 12 CATGGACCCTGC ............ scaffold21444 ScafM SNP 0001.scaffold00002 161799 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 161816 2 CA TG scaffold21444 ScafM INDEL 0001.scaffold00002 161837 7 CGACCAG ....... scaffold21444 ScafM INDEL 0001.scaffold00002 161845 5 TTCTT ..... scaffold21444 ScafM INDEL 0001.scaffold00002 161855 8 GGTTTCAT ........ scaffold21444 ScafM INDEL 0001.scaffold00002 161865 6 CCGGGT ...... scaffold21444 ScafM INDEL 0001.scaffold00002 161874 12 CTGACCCGGTTT ............ scaffold21444 ScafM INDEL 0001.scaffold00002 161921 3 ... CCG scaffold21444 ScafM SNP 0001.scaffold00002 161947 2 CT TG scaffold21444 Both INDEL 0001.scaffold00002 162005 1 . C scaffold21444 Both SNP 0001.scaffold00002 162033 1 G T scaffold21444 Both SNP 0001.scaffold00002 162047 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 162100 1 A T scaffold21444 ScafM INDEL 0001.scaffold00002 162105 1 . G scaffold21444 Both SNP 0001.scaffold00002 162134 1 C T scaffold21444 Both SNP 0001.scaffold00002 162142 1 T A scaffold21444 Both SNP 0001.scaffold00002 162179 1 C T scaffold21444 Both SNP 0001.scaffold00002 162224 1 G A scaffold21444 Both SNP 0001.scaffold00002 162233 1 G T scaffold21444 Both SNP 0001.scaffold00002 162260 1 A G scaffold21444 ReadM SNP 0001.scaffold00002 162359 1 A G - ReadM SNP 0001.scaffold00002 162429 1 A G - ReadM SNP 0001.scaffold00002 162505 1 G A - ReadM INDEL 0001.scaffold00002 162522 1 G . - ReadM INDEL 0001.scaffold00002 162696 1 . A - ReadM SNP 0001.scaffold00002 162749 1 G C - ReadM SNP 0001.scaffold00002 162759 1 G A - ReadM INDEL 0001.scaffold00002 163018 3 ... ATT - ScafM SNP 0001.scaffold00002 167813 1 T C scaffold333 ScafM INDEL 0001.scaffold00002 167877 1 T . scaffold333 ScafM SNP 0001.scaffold00002 167895 1 A G scaffold333 ScafM SNP 0001.scaffold00002 167898 1 A G scaffold333 ScafM INDEL 0001.scaffold00002 167929 1 . T scaffold333 ScafM SNP 0001.scaffold00002 168042 1 T A scaffold333 ScafM INDEL 0001.scaffold00002 168052 1 . A scaffold333 ScafM SNP 0001.scaffold00002 168064 1 G T scaffold333 ScafM SNP 0001.scaffold00002 168105 1 T C scaffold333 ScafM SNP 0001.scaffold00002 170268 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 170513 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 170549 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 170571 1 A G scaffold21444 ScafM SNP 0001.scaffold00002 170583 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 170601 1 T C scaffold21444 ScafM SNP 0001.scaffold00002 170615 1 C T scaffold21444 ScafM SNP 0001.scaffold00002 170617 1 A C scaffold21444 ScafM SNP 0001.scaffold00002 170622 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 170632 1 T A scaffold21444 ScafM SNP 0001.scaffold00002 170637 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 170656 1 G A scaffold21444 ScafM SNP 0001.scaffold00002 170739 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 170772 1 G T scaffold13656 ReadM SNP 0001.scaffold00002 171323 1 C T - ReadM SNP 0001.scaffold00002 171411 1 G T - ReadM SNP 0001.scaffold00002 171438 1 A G - Both SNP 0001.scaffold00002 171480 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 171506 1 C G scaffold13656 ScafM SNP 0001.scaffold00002 171527 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 171536 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 171543 2 AT TG scaffold13656 ScafM SNP 0001.scaffold00002 171562 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 171566 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 171580 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 171591 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 171620 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 171623 1 T A scaffold13656 ScafM SNP 0001.scaffold00002 171759 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 171778 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 171786 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 171848 1 A T scaffold13656 ScafM SNP 0001.scaffold00002 171850 1 G A scaffold13656 ScafM INDEL 0001.scaffold00002 171857 1 . C scaffold13656 ScafM SNP 0001.scaffold00002 171913 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 172685 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 172731 1 A G scaffold13656 ScafM INDEL 0001.scaffold00002 172744 2 .. TG scaffold13656 ScafM SNP 0001.scaffold00002 172792 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 172831 1 A T scaffold13656 ScafM SNP 0001.scaffold00002 172875 1 C G scaffold13656 ScafM SNP 0001.scaffold00002 172881 1 A G scaffold13656 ScafM INDEL 0001.scaffold00002 172899 1 . A scaffold13656 ScafM SNP 0001.scaffold00002 172915 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 172932 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 172934 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 172951 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 173037 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 173040 1 G A scaffold13656 Both SNP 0001.scaffold00002 173202 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 173251 2 TG CA scaffold13656 Both SNP 0001.scaffold00002 173312 1 C T scaffold13656 ReadM SNP 0001.scaffold00002 173341 1 C T - ReadM INDEL 0001.scaffold00002 173364 1 . C - Both INDEL 0001.scaffold00002 173928 2 .. TT scaffold13656 ScafM SNP 0001.scaffold00002 173977 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 173985 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 173989 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 173992 1 A T scaffold13656 ScafM SNP 0001.scaffold00002 174004 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 174014 1 C T scaffold13656 ScafM INDEL 0001.scaffold00002 174051 5 ..... TTTTT scaffold13656 ScafM SNP 0001.scaffold00002 174058 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 174072 1 G A scaffold13656 ScafM SNP 0001.scaffold00002 174090 1 A G scaffold13656 ScafM SNP 0001.scaffold00002 174093 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 174118 1 A T scaffold13656 ScafM SNP 0001.scaffold00002 174126 1 C T scaffold13656 ScafM SNP 0001.scaffold00002 174131 1 A C scaffold13656 ScafM SNP 0001.scaffold00002 174135 1 C A scaffold13656 Both SNP 0001.scaffold00002 174179 1 C T scaffold13656 Both INDEL 0001.scaffold00002 174194 1 . A scaffold13656 Both SNP 0001.scaffold00002 174209 1 C A scaffold13656 ReadM INDEL 0001.scaffold00002 174344 1 C . - ScafM SNP 0001.scaffold00002 174502 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 174505 1 G T scaffold13656 Both SNP 0001.scaffold00002 174535 1 G T scaffold13656 Both INDEL 0001.scaffold00002 174564 2 .. AT scaffold13656 Both SNP 0001.scaffold00002 174627 1 C G scaffold13656 ScafM SNP 0001.scaffold00002 174866 1 C A scaffold13656 ScafM INDEL 0001.scaffold00002 174876 4 .... TTAT scaffold13656 ScafM SNP 0001.scaffold00002 174933 1 C T scaffold13656 ScafM INDEL 0001.scaffold00002 174963 1 . C scaffold13656 ScafM SNP 0001.scaffold00002 175068 1 T C scaffold13656 ScafM SNP 0001.scaffold00002 175096 1 T A scaffold13656 ScafM SNP 0001.scaffold00002 175146 1 A C scaffold13656 ScafM SNP 0001.scaffold00002 176183 1 C A scaffold23067 ScafM SNP 0001.scaffold00002 176204 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 176250 1 A G scaffold23067 ScafM INDEL 0001.scaffold00002 176258 11 ........... ATAAGAAGCCA scaffold23067 ScafM SNP 0001.scaffold00002 176267 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 176284 1 C T scaffold23067 ScafM INDEL 0001.scaffold00002 176288 1 . A scaffold23067 ScafM INDEL 0001.scaffold00002 176298 2 .. AA scaffold23067 ScafM SNP 0001.scaffold00002 176341 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 176351 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 176354 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 176377 1 C A scaffold23067 ScafM SNP 0001.scaffold00002 176383 1 C T scaffold23067 ScafM INDEL 0001.scaffold00002 176580 1 . G scaffold23067 ScafM SNP 0001.scaffold00002 176592 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 176601 1 C G scaffold23067 ScafM SNP 0001.scaffold00002 176606 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 176609 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 176635 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 176735 1 A G scaffold23067 ScafM INDEL 0001.scaffold00002 176774 37 ..................................... AACGAACAAGTTTAGTAAAAATCAGATAAAACAAACA scaffold23067 ScafM INDEL 0001.scaffold00002 176776 5 ..... ATCTA scaffold23067 ScafM INDEL 0001.scaffold00002 176779 4 .... TCTA scaffold23067 ScafM INDEL 0001.scaffold00002 176782 4 .... TCTA scaffold23067 ScafM INDEL 0001.scaffold00002 176784 5 ..... CTTAG scaffold23067 ScafM INDEL 0001.scaffold00002 176786 5 ..... AAGGG scaffold23067 ScafM SNP 0001.scaffold00002 176800 1 C T scaffold23067 ScafM INDEL 0001.scaffold00002 176946 7 ....... TTCTCTC scaffold23067 ScafM INDEL 0001.scaffold00002 176950 2 .. TT scaffold23067 Both SNP 0001.scaffold00002 177093 1 A G scaffold23067 Both SNP 0001.scaffold00002 177299 1 C T scaffold23067 Both SNP 0001.scaffold00002 177344 1 A T scaffold23067 Both SNP 0001.scaffold00002 177391 1 A G scaffold23067 Both INDEL 0001.scaffold00002 177396 1 T . scaffold23067 Both INDEL 0001.scaffold00002 177482 1 . T scaffold23067 ScafM SNP 0001.scaffold00002 177485 1 C T scaffold23067 Both SNP 0001.scaffold00002 177515 1 A T scaffold23067 ScafM INDEL 0001.scaffold00002 177563 7 AGTTTCT ....... scaffold23067 ScafM SNP 0001.scaffold00002 177597 1 C T scaffold23067 ScafM INDEL 0001.scaffold00002 177598 4 .... TTTT scaffold23067 Both SNP 0001.scaffold00002 177637 1 G A scaffold23067 Both SNP 0001.scaffold00002 177717 1 G A scaffold23067 Both SNP 0001.scaffold00002 177777 1 C T scaffold23067 Both SNP 0001.scaffold00002 177793 1 G T scaffold23067 Both SNP 0001.scaffold00002 177807 1 A T scaffold23067 Both SNP 0001.scaffold00002 177863 1 T C scaffold23067 Both SNP 0001.scaffold00002 178312 1 T C scaffold23067 Both SNP 0001.scaffold00002 178491 1 T C scaffold23067 Both SNP 0001.scaffold00002 178639 1 C T scaffold23067 Both SNP 0001.scaffold00002 178978 1 A C scaffold23067 Both SNP 0001.scaffold00002 178997 1 T C scaffold23067 Both SNP 0001.scaffold00002 179575 1 C T scaffold23067 Both SNP 0001.scaffold00002 179634 1 A G scaffold23067 Both SNP 0001.scaffold00002 179690 1 A G scaffold23067 Both SNP 0001.scaffold00002 179702 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 179717 1 T A scaffold23067 ScafM INDEL 0001.scaffold00002 179736 1 . C scaffold23067 ScafM SNP 0001.scaffold00002 179763 1 G T scaffold23067 ScafM INDEL 0001.scaffold00002 179775 5 TCATC ..... scaffold23067 ScafM SNP 0001.scaffold00002 179797 1 T G scaffold23067 Both SNP 0001.scaffold00002 179883 1 G C scaffold23067 Both SNP 0001.scaffold00002 179921 1 G A scaffold23067 Both SNP 0001.scaffold00002 179936 1 A G scaffold23067 Both SNP 0001.scaffold00002 179943 1 G T scaffold23067 Both INDEL 0001.scaffold00002 179967 1 . T scaffold23067 Both SNP 0001.scaffold00002 180055 1 C T scaffold23067 Both SNP 0001.scaffold00002 180084 1 C T scaffold23067 ReadM SNP 0001.scaffold00002 180152 1 A G - ReadM SNP 0001.scaffold00002 180155 1 C T - ReadM SNP 0001.scaffold00002 180219 1 C G - ReadM INDEL 0001.scaffold00002 180237 1 . T - ScafM SNP 0001.scaffold00002 180288 3 ATA GCG scaffold23067 ScafM SNP 0001.scaffold00002 180314 1 T G scaffold23067 ScafM SNP 0001.scaffold00002 180351 1 G C scaffold23067 ScafM SNP 0001.scaffold00002 180363 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 180367 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 180369 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 180379 1 C T scaffold23067 Both SNP 0001.scaffold00002 180425 1 C G scaffold23067 ScafM SNP 0001.scaffold00002 180493 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 180506 2 GC AA scaffold23067 ScafM SNP 0001.scaffold00002 180510 1 G A scaffold23067 Both SNP 0001.scaffold00002 180559 1 T C scaffold23067 Both SNP 0001.scaffold00002 180648 1 C G scaffold23067 Both SNP 0001.scaffold00002 180660 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 180686 1 A C scaffold23067 ScafM SNP 0001.scaffold00002 180699 1 G A scaffold23067 ScafM INDEL 0001.scaffold00002 180736 4 GATC .... scaffold23067 ScafM INDEL 0001.scaffold00002 180741 2 TT .. scaffold23067 ScafM INDEL 0001.scaffold00002 180744 1 T . scaffold23067 ScafM INDEL 0001.scaffold00002 180800 1 T . scaffold23067 ScafM INDEL 0001.scaffold00002 180803 2 TA .. scaffold23067 ScafM SNP 0001.scaffold00002 180809 1 T A scaffold23067 ScafM INDEL 0001.scaffold00002 180811 3 TGA ... scaffold23067 Both SNP 0001.scaffold00002 180847 1 C T scaffold23067 Both SNP 0001.scaffold00002 180898 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 180945 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 180956 2 AT GG scaffold23067 ScafM SNP 0001.scaffold00002 180976 1 C T scaffold23067 ScafM INDEL 0001.scaffold00002 180997 1 C . scaffold23067 ScafM INDEL 0001.scaffold00002 181019 2 CT .. scaffold23067 ScafM SNP 0001.scaffold00002 181028 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 181031 1 T G scaffold23067 ScafM SNP 0001.scaffold00002 181041 1 G T scaffold23067 ScafM SNP 0001.scaffold00002 181062 1 G T scaffold23067 ScafM SNP 0001.scaffold00002 181074 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 181098 1 A T scaffold23067 ScafM INDEL 0001.scaffold00002 181107 27 TTAAATTCGACATTTGCACGTACTTTC ........................... scaffold23067 ScafM SNP 0001.scaffold00002 181147 1 A G scaffold23067 Both SNP 0001.scaffold00002 181172 1 T A scaffold23067 Both SNP 0001.scaffold00002 181181 1 T A scaffold23067 Both SNP 0001.scaffold00002 181263 1 A G scaffold23067 Both SNP 0001.scaffold00002 181320 1 T C scaffold23067 Both SNP 0001.scaffold00002 181326 1 A G scaffold23067 Both SNP 0001.scaffold00002 181398 1 C T scaffold23067 Both SNP 0001.scaffold00002 181452 1 T C scaffold23067 Both SNP 0001.scaffold00002 181466 1 T C scaffold23067 Both INDEL 0001.scaffold00002 181673 1 . T scaffold23067 Both SNP 0001.scaffold00002 181710 1 A C scaffold23067 Both SNP 0001.scaffold00002 181730 1 G A scaffold23067 Both SNP 0001.scaffold00002 181796 1 A G scaffold23067 Both SNP 0001.scaffold00002 181829 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 181904 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 181907 1 G T scaffold23067 ScafM SNP 0001.scaffold00002 181923 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 181925 1 G T scaffold23067 Both SNP 0001.scaffold00002 182047 1 G A scaffold23067 Both SNP 0001.scaffold00002 182111 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182116 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182125 1 A G scaffold23067 ScafM INDEL 0001.scaffold00002 182152 3 TTG ... scaffold23067 ScafM SNP 0001.scaffold00002 182176 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182188 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 182192 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 182197 1 T G scaffold23067 ScafM INDEL 0001.scaffold00002 182216 10 TGGTTGCCAA .......... scaffold23067 ScafM SNP 0001.scaffold00002 182265 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182300 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182324 1 A G scaffold23067 ScafM INDEL 0001.scaffold00002 182327 1 T . scaffold23067 ScafM SNP 0001.scaffold00002 182338 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182349 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 182351 1 T C scaffold23067 ScafM INDEL 0001.scaffold00002 182390 1 C . scaffold23067 ScafM INDEL 0001.scaffold00002 182406 1 . T scaffold23067 ScafM SNP 0001.scaffold00002 182415 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182417 1 A G scaffold23067 Both SNP 0001.scaffold00002 182469 1 C A scaffold23067 Both SNP 0001.scaffold00002 182499 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 182528 1 A T scaffold23067 ScafM SNP 0001.scaffold00002 182537 1 C A scaffold23067 ScafM SNP 0001.scaffold00002 182545 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182575 1 C T scaffold23067 Both SNP 0001.scaffold00002 182605 1 C T scaffold23067 Both SNP 0001.scaffold00002 182617 1 C T scaffold23067 ReadM SNP 0001.scaffold00002 182660 1 A T - Both SNP 0001.scaffold00002 182769 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182798 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 182838 1 T A scaffold23067 ScafM SNP 0001.scaffold00002 182845 1 G A scaffold23067 ScafM SNP 0001.scaffold00002 182853 1 A C scaffold23067 ScafM SNP 0001.scaffold00002 182881 1 A T scaffold23067 ScafM SNP 0001.scaffold00002 182895 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 182906 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182912 1 C G scaffold23067 ScafM SNP 0001.scaffold00002 182932 1 G A scaffold23067 ScafM INDEL 0001.scaffold00002 182938 1 . A scaffold23067 ScafM SNP 0001.scaffold00002 182946 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 182949 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 182998 3 GGA AAT scaffold23067 ScafM SNP 0001.scaffold00002 183008 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 183011 1 A T scaffold23067 ScafM SNP 0001.scaffold00002 183046 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 183052 1 C A scaffold23067 ScafM SNP 0001.scaffold00002 183062 1 A G scaffold23067 Both SNP 0001.scaffold00002 183104 1 A G scaffold23067 Both SNP 0001.scaffold00002 183162 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 183218 2 AA TT scaffold23067 ScafM SNP 0001.scaffold00002 183253 1 T C scaffold23067 ScafM SNP 0001.scaffold00002 183266 3 ATT TAA scaffold23067 ScafM SNP 0001.scaffold00002 183382 1 A G scaffold23067 ScafM SNP 0001.scaffold00002 183391 1 C G scaffold23067 ScafM SNP 0001.scaffold00002 183398 1 G T scaffold23067 ScafM SNP 0001.scaffold00002 183449 1 C A scaffold23067 ScafM SNP 0001.scaffold00002 183462 1 C T scaffold23067 ScafM SNP 0001.scaffold00002 183470 1 C T scaffold23067 ReadM SNP 0001.scaffold00002 184032 1 A T - ReadM SNP 0001.scaffold00002 184465 1 G A - ReadM INDEL 0001.scaffold00002 184491 1 G . - ReadM SNP 0001.scaffold00002 184525 1 C T - ReadM SNP 0001.scaffold00002 184554 1 T A - ReadM SNP 0001.scaffold00002 184558 1 T C - ReadM SNP 0001.scaffold00002 184785 1 T G - ReadM INDEL 0001.scaffold00002 184856 1 T . - ScafM INDEL 0001.scaffold00002 184887 7 ....... CACAATA scaffold726 ScafM SNP 0001.scaffold00002 184906 1 T G scaffold726 ScafM SNP 0001.scaffold00002 184935 1 T C scaffold726 Both SNP 0001.scaffold00002 184953 1 T A scaffold726 ReadM SNP 0001.scaffold00002 184960 1 C T - ScafM SNP 0001.scaffold00002 184965 1 G A scaffold726 ScafM INDEL 0001.scaffold00002 185007 6 ...... GTGTAG scaffold726 ScafM INDEL 0001.scaffold00002 185008 1 . C scaffold726 ScafM SNP 0001.scaffold00002 185017 1 T C scaffold726 ReadM SNP 0001.scaffold00002 185032 1 G A - ScafM INDEL 0001.scaffold00002 185037 1 . C scaffold726 ScafM SNP 0001.scaffold00002 185092 1 A C scaffold726 ScafM SNP 0001.scaffold00002 185111 1 G A scaffold726 ScafM SNP 0001.scaffold00002 185119 1 A T scaffold726 ScafM SNP 0001.scaffold00002 185156 1 T C scaffold726 ScafM SNP 0001.scaffold00002 185171 1 A C scaffold726 ScafM SNP 0001.scaffold00002 185181 1 A C scaffold726 ScafM SNP 0001.scaffold00002 185192 1 G A scaffold726 ScafM SNP 0001.scaffold00002 185199 1 A G scaffold726 ScafM SNP 0001.scaffold00002 185207 1 C T scaffold726 ScafM SNP 0001.scaffold00002 185214 1 T G scaffold726 ScafM SNP 0001.scaffold00002 185228 1 A G scaffold726 ScafM SNP 0001.scaffold00002 185234 1 A C scaffold726 ScafM SNP 0001.scaffold00002 185257 1 T C scaffold726 ScafM SNP 0001.scaffold00002 185273 1 A G scaffold726 ScafM SNP 0001.scaffold00002 185358 1 T G scaffold726 ScafM SNP 0001.scaffold00002 185375 1 G C scaffold726 ReadM SNP 0001.scaffold00002 185381 1 G A - ReadM SNP 0001.scaffold00002 185384 1 G A - ScafM SNP 0001.scaffold00002 185405 1 C G scaffold726 ScafM SNP 0001.scaffold00002 185435 1 A C scaffold726 ScafM SNP 0001.scaffold00002 185441 1 A G scaffold726 ScafM SNP 0001.scaffold00002 185455 1 G A scaffold726 ReadM SNP 0001.scaffold00002 185462 1 A T - ScafM SNP 0001.scaffold00002 185466 1 A G scaffold726 ReadM SNP 0001.scaffold00002 185675 1 G A - ReadM SNP 0001.scaffold00002 185682 1 C A - Both SNP 0001.scaffold00002 185770 1 T C scaffold3912 ReadM SNP 0001.scaffold00002 185785 1 T C - ReadM SNP 0001.scaffold00002 185797 1 G C - ReadM SNP 0001.scaffold00002 185893 1 A G - ReadM SNP 0001.scaffold00002 185910 1 T C - ReadM SNP 0001.scaffold00002 185921 1 C T - ScafM SNP 0001.scaffold00002 185976 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 185993 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 186007 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 186017 1 C T scaffold3912 ScafM INDEL 0001.scaffold00002 186053 11 CTATTAATGGT ........... scaffold3912 ScafM SNP 0001.scaffold00002 186093 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 186142 1 C A scaffold3912 ScafM SNP 0001.scaffold00002 186154 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 186172 2 GT AA scaffold3912 Both SNP 0001.scaffold00002 186218 1 A G scaffold3912 Both SNP 0001.scaffold00002 186286 1 C T scaffold3912 Both SNP 0001.scaffold00002 186295 1 C T scaffold3912 Both SNP 0001.scaffold00002 186339 1 T A scaffold3912 Both SNP 0001.scaffold00002 186368 1 G A scaffold3912 Both SNP 0001.scaffold00002 186416 1 A C scaffold3912 Both SNP 0001.scaffold00002 186443 1 T A scaffold3912 Both SNP 0001.scaffold00002 186474 1 T A scaffold3912 Both SNP 0001.scaffold00002 186490 1 A G scaffold3912 ReadM SNP 0001.scaffold00002 186557 1 C A - ReadM SNP 0001.scaffold00002 186837 1 G A - ReadM SNP 0001.scaffold00002 186981 1 C T - ReadM SNP 0001.scaffold00002 187066 1 G T - ReadM SNP 0001.scaffold00002 187539 1 C T - ScafM SNP 0001.scaffold00002 187603 1 C A scaffold3912 ScafM SNP 0001.scaffold00002 187605 1 A G scaffold3912 Both SNP 0001.scaffold00002 187611 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 187686 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 187709 2 TA AT scaffold3912 ScafM SNP 0001.scaffold00002 187720 2 AG TA scaffold3912 ScafM SNP 0001.scaffold00002 187731 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 187769 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 187791 1 A C scaffold3912 ScafM SNP 0001.scaffold00002 187793 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 187800 1 T G scaffold3912 ScafM SNP 0001.scaffold00002 187808 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 187825 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 187976 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 187986 1 T C scaffold3912 Both SNP 0001.scaffold00002 188009 1 C A scaffold3912 Both SNP 0001.scaffold00002 188051 1 G T scaffold3912 Both SNP 0001.scaffold00002 188076 1 A C scaffold3912 ScafM SNP 0001.scaffold00002 188130 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188137 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 188170 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 188185 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 188205 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188248 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 188261 1 C T scaffold3912 Both SNP 0001.scaffold00002 188323 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188395 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 188397 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188493 1 C G scaffold3912 ScafM SNP 0001.scaffold00002 188495 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 188500 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 188521 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188599 1 A T scaffold3912 ScafM INDEL 0001.scaffold00002 188675 1 A . scaffold3912 ScafM SNP 0001.scaffold00002 188683 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188718 2 TT CC scaffold3912 ScafM INDEL 0001.scaffold00002 188734 2 AT .. scaffold3912 ScafM SNP 0001.scaffold00002 188748 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 188753 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 188775 1 G T scaffold3912 Both SNP 0001.scaffold00002 188846 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 188912 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 189374 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 189403 1 A C scaffold3912 ScafM SNP 0001.scaffold00002 189407 1 T G scaffold3912 ScafM SNP 0001.scaffold00002 189409 1 C A scaffold3912 ScafM SNP 0001.scaffold00002 189421 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 189431 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 189446 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 189482 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 189502 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 189546 1 A C scaffold3912 ScafM SNP 0001.scaffold00002 189550 1 G C scaffold3912 ScafM SNP 0001.scaffold00002 189560 2 TA CG scaffold3912 ScafM SNP 0001.scaffold00002 189622 1 T G scaffold3912 ScafM SNP 0001.scaffold00002 189641 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 189675 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 189680 2 CC TT scaffold3912 ScafM SNP 0001.scaffold00002 189685 1 A G scaffold3912 ScafM INDEL 0001.scaffold00002 189708 12 GGGGGGGTTGGT ............ scaffold3912 ScafM INDEL 0001.scaffold00002 189723 15 GGGGACCAAGAGGGT ............... scaffold3912 ScafM INDEL 0001.scaffold00002 189742 4 AGTC .... scaffold3912 ScafM INDEL 0001.scaffold00002 189748 1 A . scaffold3912 ScafM INDEL 0001.scaffold00002 189759 1 C . scaffold3912 ScafM INDEL 0001.scaffold00002 189762 2 GA .. scaffold3912 ScafM SNP 0001.scaffold00002 189775 1 C G scaffold3912 ScafM SNP 0001.scaffold00002 189892 1 C G scaffold3912 ScafM SNP 0001.scaffold00002 189895 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 189932 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 189999 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 190023 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 190031 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 190045 1 G T scaffold3912 Both SNP 0001.scaffold00002 190299 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 190305 1 T C scaffold3912 ScafM INDEL 0001.scaffold00002 190344 2 .. TT scaffold3912 ScafM SNP 0001.scaffold00002 190351 1 C T scaffold3912 ScafM INDEL 0001.scaffold00002 190842 2 .. AC scaffold3912 ScafM INDEL 0001.scaffold00002 190844 1 . G scaffold3912 ScafM SNP 0001.scaffold00002 190847 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 190910 1 G A scaffold3912 ScafM INDEL 0001.scaffold00002 190944 2 .. TA scaffold3912 ScafM INDEL 0001.scaffold00002 190975 2 AA .. scaffold3912 ScafM SNP 0001.scaffold00002 191039 1 T G scaffold3912 ScafM SNP 0001.scaffold00002 191041 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 191080 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 191366 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 191377 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 191379 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 191406 2 CC TT scaffold3912 ScafM SNP 0001.scaffold00002 191411 1 G A scaffold3912 Both SNP 0001.scaffold00002 191452 1 T G scaffold3912 Both SNP 0001.scaffold00002 191493 1 C A scaffold3912 Both SNP 0001.scaffold00002 191555 1 G A scaffold3912 Both SNP 0001.scaffold00002 191568 1 G C scaffold3912 ScafM SNP 0001.scaffold00002 191594 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 191611 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 191618 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 191626 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 191633 1 C T scaffold3912 ScafM INDEL 0001.scaffold00002 191641 1 . C scaffold3912 ScafM SNP 0001.scaffold00002 191654 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 191671 1 A C scaffold3912 ScafM SNP 0001.scaffold00002 191679 1 C T scaffold3912 ScafM INDEL 0001.scaffold00002 191700 1 . A scaffold3912 ScafM SNP 0001.scaffold00002 191707 1 C G scaffold3912 ReadM INDEL 0001.scaffold00002 191959 1 T . - ReadM SNP 0001.scaffold00002 191966 1 C T - ReadM SNP 0001.scaffold00002 192010 1 G A - ScafM INDEL 0001.scaffold00002 192139 1 A . scaffold3912 ScafM SNP 0001.scaffold00002 192248 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 192600 1 T C scaffold3912 ScafM INDEL 0001.scaffold00002 192603 1 . A scaffold3912 ScafM SNP 0001.scaffold00002 192710 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 192766 1 C A scaffold3912 ScafM SNP 0001.scaffold00002 192977 1 G T scaffold3912 ScafM SNP 0001.scaffold00002 193014 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 193022 1 T A scaffold3912 ScafM SNP 0001.scaffold00002 193516 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 193548 1 A G scaffold3912 ScafM INDEL 0001.scaffold00002 193561 1 A . scaffold3912 ScafM INDEL 0001.scaffold00002 193591 2 AC .. scaffold3912 ScafM INDEL 0001.scaffold00002 193707 8 ........ TGGCTGTA scaffold3912 ScafM SNP 0001.scaffold00002 193781 1 T C scaffold3912 ScafM INDEL 0001.scaffold00002 193785 1 . T scaffold3912 ScafM SNP 0001.scaffold00002 194338 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 194423 2 GC AT scaffold3912 ScafM SNP 0001.scaffold00002 194457 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 194506 1 T C scaffold3912 ScafM INDEL 0001.scaffold00002 194514 4 .... AAGG scaffold3912 ScafM INDEL 0001.scaffold00002 194543 1 . T scaffold3912 ScafM SNP 0001.scaffold00002 196832 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 196839 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 196890 2 CT TC scaffold3912 ScafM SNP 0001.scaffold00002 196929 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 196933 1 T A scaffold3912 ScafM SNP 0001.scaffold00002 196936 1 T A scaffold3912 ScafM INDEL 0001.scaffold00002 196939 2 .. TC scaffold3912 ScafM SNP 0001.scaffold00002 196955 3 ACC CAT scaffold3912 ScafM SNP 0001.scaffold00002 196972 1 T A scaffold3912 ScafM INDEL 0001.scaffold00002 197026 2 CA .. scaffold3912 ScafM INDEL 0001.scaffold00002 197030 3 CAG ... scaffold3912 ScafM SNP 0001.scaffold00002 197034 1 T C scaffold3912 ScafM INDEL 0001.scaffold00002 197073 1 . A scaffold3912 ScafM SNP 0001.scaffold00002 197075 1 G C scaffold3912 ScafM SNP 0001.scaffold00002 197087 1 A G scaffold3912 ScafM SNP 0001.scaffold00002 197093 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 197112 1 G A scaffold3912 ScafM INDEL 0001.scaffold00002 197118 4 .... ATTT scaffold3912 ScafM SNP 0001.scaffold00002 197126 1 T G scaffold3912 ScafM SNP 0001.scaffold00002 197148 1 T A scaffold3912 ScafM SNP 0001.scaffold00002 197181 1 A T scaffold3912 ScafM SNP 0001.scaffold00002 198758 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 198768 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 198771 1 C T scaffold3912 ScafM INDEL 0001.scaffold00002 198783 3 AAT .TC scaffold3912 ScafM SNP 0001.scaffold00002 198794 3 TGC AAT scaffold3912 ScafM SNP 0001.scaffold00002 198803 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 198834 1 G C scaffold3912 ScafM INDEL 0001.scaffold00002 198866 1 T . scaffold3912 ScafM INDEL 0001.scaffold00002 198884 1 A . scaffold3912 ScafM SNP 0001.scaffold00002 198887 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 198895 1 A C scaffold3912 ScafM INDEL 0001.scaffold00002 198901 1 . A scaffold3912 ScafM INDEL 0001.scaffold00002 198917 2 .. AA scaffold3912 ScafM INDEL 0001.scaffold00002 198920 1 . A scaffold3912 ScafM INDEL 0001.scaffold00002 198923 2 .. TT scaffold3912 ScafM SNP 0001.scaffold00002 198930 1 G C scaffold3912 ScafM SNP 0001.scaffold00002 198944 1 T G scaffold3912 ScafM INDEL 0001.scaffold00002 198954 1 T . scaffold3912 ScafM SNP 0001.scaffold00002 198960 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 198994 1 C T scaffold3912 ScafM SNP 0001.scaffold00002 198999 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 199015 1 G A scaffold3912 ScafM SNP 0001.scaffold00002 199028 1 G T scaffold3912 ScafM INDEL 0001.scaffold00002 199042 2 .. TT scaffold3912 ScafM SNP 0001.scaffold00002 199044 2 AA TT scaffold3912 ScafM SNP 0001.scaffold00002 199121 1 T G scaffold3912 ReadM SNP 0001.scaffold00002 199508 1 G T - ReadM INDEL 0001.scaffold00002 199973 1 . G - ReadM SNP 0001.scaffold00002 200124 1 C T - ReadM SNP 0001.scaffold00002 200152 1 C G - ReadM SNP 0001.scaffold00002 200155 1 C T - ReadM SNP 0001.scaffold00002 200372 1 C A - ScafM INDEL 0001.scaffold00002 216734 1 G . scaffold3912 ScafM SNP 0001.scaffold00002 216742 1 T C scaffold3912 ScafM SNP 0001.scaffold00002 216755 1 A C scaffold3912 ScafM SNP 0002.scaffold00003 19145 1 T A scaffold2754 ScafM SNP 0002.scaffold00003 19148 2 AT GC scaffold2754 ScafM SNP 0002.scaffold00003 19158 1 T A scaffold2754 ScafM SNP 0002.scaffold00003 48087 1 A C scaffold2754 ScafM SNP 0002.scaffold00003 48123 1 A G scaffold2754 ScafM SNP 0002.scaffold00003 48137 1 T C scaffold2754 ScafM SNP 0002.scaffold00003 48166 1 A G scaffold2754 ScafM SNP 0002.scaffold00003 48186 1 T C scaffold2754 ScafM SNP 0002.scaffold00003 48190 1 G A scaffold2754 ScafM SNP 0002.scaffold00003 48210 1 C G scaffold2754 ScafM SNP 0002.scaffold00003 48269 1 T C scaffold2754 ScafM SNP 0002.scaffold00003 48697 1 A T scaffold2754 ScafM SNP 0002.scaffold00003 48704 1 A G scaffold2754 ScafM SNP 0002.scaffold00003 48709 1 A C scaffold2754 ScafM SNP 0002.scaffold00003 48748 1 G A scaffold2754 ScafM SNP 0002.scaffold00003 48756 2 CC TT scaffold2754 ScafM SNP 0002.scaffold00003 49080 1 A G scaffold2754 ScafM INDEL 0002.scaffold00003 49737 16 ................ GAAAAGAACTTTTGAG scaffold2754 ScafM INDEL 0002.scaffold00003 84121 17 ................. CCCCCCCCCCCCCCCCC scaffold2754 ScafM SNP 0002.scaffold00003 92658 1 C T scaffold1232 ScafM INDEL 0002.scaffold00003 92903 1 . G scaffold1232 ScafM SNP 0002.scaffold00003 93011 1 T A scaffold1232 ScafM INDEL 0002.scaffold00003 93013 3 ... AGT scaffold1232 ScafM SNP 0002.scaffold00003 93501 1 G A scaffold1232 ScafM INDEL 0002.scaffold00003 93511 2 CA .. scaffold1232 Both SNP 0002.scaffold00003 93536 1 T C scaffold1232 ReadM SNP 0002.scaffold00003 93699 1 C T - ReadM SNP 0002.scaffold00003 93704 1 G A - ReadM SNP 0002.scaffold00003 93719 1 A G - ReadM SNP 0002.scaffold00003 93774 1 T C - ReadM SNP 0002.scaffold00003 93845 1 G A - ReadM SNP 0002.scaffold00003 94110 1 T C - ReadM SNP 0002.scaffold00003 94208 1 A C - Both SNP 0002.scaffold00003 94450 1 T C scaffold1232 ReadM SNP 0002.scaffold00003 94535 1 G T - ReadM SNP 0002.scaffold00003 94572 1 T A - Both SNP 0002.scaffold00003 94605 1 A C scaffold1232 ScafM SNP 0002.scaffold00003 94751 1 T C scaffold1232 ScafM INDEL 0002.scaffold00003 94752 12 ............ TTTTTTTTTTGT scaffold1232 ScafM SNP 0002.scaffold00003 94782 1 G A scaffold1232 ScafM INDEL 0002.scaffold00003 94808 1 . T scaffold1232 ScafM INDEL 0002.scaffold00003 94816 1 T . scaffold1232 ScafM SNP 0002.scaffold00003 94828 1 A C scaffold1232 ReadM SNP 0002.scaffold00003 94886 1 A G - Both SNP 0002.scaffold00003 94950 1 T A scaffold1232 Both SNP 0002.scaffold00003 94981 1 G A scaffold1232 Both SNP 0002.scaffold00003 95012 1 A T scaffold1232 ReadM SNP 0002.scaffold00003 95123 1 C A - ReadM SNP 0002.scaffold00003 95156 1 A C - ReadM SNP 0002.scaffold00003 95185 1 T C - ReadM SNP 0002.scaffold00003 95293 1 T G - ReadM SNP 0002.scaffold00003 95338 1 T C - ReadM SNP 0002.scaffold00003 95347 1 T C - ReadM SNP 0002.scaffold00003 95405 1 A G - ReadM SNP 0002.scaffold00003 95431 1 G A - ReadM SNP 0002.scaffold00003 95596 1 C T - ReadM SNP 0002.scaffold00003 95624 1 T C - ScafM SNP 0002.scaffold00003 113832 1 T C scaffold2754 ScafM SNP 0002.scaffold00003 114144 1 A C scaffold2754 ScafM SNP 0002.scaffold00003 115666 1 G T scaffold2754 ScafM SNP 0002.scaffold00003 115716 1 G A scaffold2754 ScafM SNP 0002.scaffold00003 115725 1 G A scaffold2754 ScafM INDEL 0002.scaffold00003 115729 2 AT .. scaffold2754 ScafM SNP 0002.scaffold00003 115736 1 C T scaffold2754 ScafM SNP 0002.scaffold00003 124103 1 A G scaffold1210 ScafM SNP 0002.scaffold00003 124114 1 C T scaffold1210 ScafM SNP 0002.scaffold00003 124117 1 G A scaffold1210 ScafM SNP 0002.scaffold00003 124137 1 C T scaffold1210 ScafM SNP 0002.scaffold00003 124148 1 G T scaffold1210 ScafM SNP 0002.scaffold00003 124158 1 C T scaffold1210 ScafM SNP 0002.scaffold00003 124189 1 T G scaffold1210 ScafM SNP 0002.scaffold00003 124219 1 T A scaffold1210 ScafM SNP 0002.scaffold00003 124222 1 C T scaffold1210 ScafM INDEL 0002.scaffold00003 135662 1 . A scaffold10197 ReadM INDEL 0002.scaffold00003 136541 1 T . - ScafM SNP 0002.scaffold00003 159676 1 T G scaffold19507 ScafM SNP 0002.scaffold00003 159708 1 C T scaffold19507 ScafM SNP 0002.scaffold00003 159754 1 A G scaffold19507 ScafM SNP 0002.scaffold00003 159777 1 C A scaffold19507 ScafM INDEL 0002.scaffold00003 159832 2 .C TT scaffold19507 ScafM SNP 0002.scaffold00003 159847 1 A T scaffold19507 ScafM SNP 0002.scaffold00003 159854 1 G T scaffold19507 ScafM SNP 0002.scaffold00003 159861 1 A G scaffold19507 ScafM SNP 0002.scaffold00003 159884 1 A C scaffold19507 ScafM SNP 0002.scaffold00003 159896 1 T G scaffold19507 ScafM SNP 0002.scaffold00003 159933 1 G A scaffold19507 ScafM SNP 0002.scaffold00003 159936 1 T G scaffold19507 ScafM SNP 0002.scaffold00003 159949 1 A C scaffold19507 ScafM SNP 0002.scaffold00003 159978 1 C T scaffold19507 ScafM SNP 0002.scaffold00003 159984 1 A C scaffold19507 ScafM SNP 0002.scaffold00003 162418 2 GA AG scaffold19507 ScafM INDEL 0002.scaffold00003 169553 2 .. AA scaffold19507 ScafM INDEL 0002.scaffold00003 187923 1 G . scaffold21270 ScafM SNP 0002.scaffold00003 187946 1 C T scaffold21270 ScafM SNP 0002.scaffold00003 187948 1 A G scaffold21270 ScafM SNP 0002.scaffold00003 190164 3 TCG CTA scaffold23799 ScafM SNP 0002.scaffold00003 190186 1 G T scaffold23799 ScafM INDEL 0002.scaffold00003 193621 1 T . scaffold6741 ScafM SNP 0002.scaffold00003 193665 1 T A scaffold6741 ScafM SNP 0002.scaffold00003 193689 1 T C scaffold6741 ScafM SNP 0002.scaffold00003 193961 1 T C scaffold6741 ScafM SNP 0002.scaffold00003 197902 1 G A scaffold7264 ScafM SNP 0002.scaffold00003 197967 1 G A scaffold7264 ScafM SNP 0002.scaffold00003 197979 1 C G scaffold7264 ScafM SNP 0002.scaffold00003 197990 1 T G scaffold7264 ScafM SNP 0002.scaffold00003 197993 1 A G scaffold7264 ScafM SNP 0002.scaffold00003 197998 1 T G scaffold7264 ScafM SNP 0002.scaffold00003 198037 1 G A scaffold7264 ScafM SNP 0002.scaffold00003 198047 1 G T scaffold7264 ScafM INDEL 0002.scaffold00003 198058 2 .T GA scaffold7264 ScafM SNP 0002.scaffold00003 198061 1 G T scaffold7264 ScafM SNP 0002.scaffold00003 198065 1 C G scaffold7264 ScafM SNP 0002.scaffold00003 198073 1 C T scaffold7264 ScafM SNP 0002.scaffold00003 198078 1 A G scaffold7264 ScafM SNP 0002.scaffold00003 210507 1 A T scaffold7459 Both INDEL 0002.scaffold00003 229228 1 . A scaffold2052 ScafM SNP 0002.scaffold00003 229938 1 T G scaffold2052 ScafM SNP 0002.scaffold00003 231108 1 A G scaffold2052 ScafM SNP 0002.scaffold00003 231117 1 T C scaffold2052 ScafM INDEL 0002.scaffold00003 263725 1 . T scaffold2052 ScafM SNP 0002.scaffold00003 325939 1 T C scaffold2541 ScafM SNP 0002.scaffold00003 334459 1 C T scaffold2541 ScafM SNP 0002.scaffold00003 334522 1 A T scaffold2541 ScafM INDEL 0002.scaffold00003 346588 3 ... AAA scaffold2541 ReadM INDEL 0002.scaffold00003 346612 1 . T - ScafM INDEL 0002.scaffold00003 366232 1 . A scaffold2541 ScafM SNP 0002.scaffold00003 371536 1 A C scaffold2541 ReadM SNP 0002.scaffold00003 372913 1 T C - ReadM INDEL 0002.scaffold00003 386926 2 AG .. - ReadM INDEL 0002.scaffold00003 386927 1 G . - ScafM SNP 0002.scaffold00003 386927 1 G A scaffold2541 ReadM INDEL 0002.scaffold00003 410268 1 . T - ScafM INDEL 0002.scaffold00003 431292 1 . A scaffold2541 ScafM SNP 0002.scaffold00003 456186 1 T C C14090593 ScafM SNP 0002.scaffold00003 456221 1 G A C14090593 ScafM SNP 0002.scaffold00003 471414 1 A T scaffold586 ScafM INDEL 0002.scaffold00003 471416 1 . A scaffold586 ScafM SNP 0002.scaffold00003 471419 1 C A scaffold586 ReadM INDEL 0002.scaffold00003 476262 1 . T - ScafM INDEL 0002.scaffold00003 486849 24 ........................ TTTTTTTTTTTTTTTTTTTTTTTT scaffold586 ScafM INDEL 0002.scaffold00003 507848 1 T . scaffold586 ScafM SNP 0002.scaffold00003 510544 1 A C scaffold586 ScafM INDEL 0002.scaffold00003 510966 1 . A scaffold586 ScafM SNP 0002.scaffold00003 520520 1 G A scaffold586 ScafM SNP 0002.scaffold00003 520550 1 T C scaffold586 Both INDEL 0002.scaffold00003 527785 1 T . scaffold586 ScafM SNP 0002.scaffold00003 529011 2 GA AG scaffold586 ScafM INDEL 0002.scaffold00003 530307 7 ....... AAAAAAA scaffold586 ScafM INDEL 0002.scaffold00003 541928 3 ATG ... scaffold35399 ReadM SNP 0002.scaffold00003 549381 1 G A - ScafM INDEL 0002.scaffold00003 558816 11 ........... CCCCCCCCCCC scaffold658 ScafM INDEL 0002.scaffold00003 559092 1 C . scaffold658 ScafM SNP 0002.scaffold00003 559095 1 T C scaffold658 ScafM SNP 0002.scaffold00003 567941 1 C T scaffold658 ScafM SNP 0002.scaffold00003 567960 1 C A scaffold658 ScafM SNP 0002.scaffold00003 568931 1 G T scaffold658 ScafM INDEL 0002.scaffold00003 569009 1 . A scaffold6524 ScafM INDEL 0002.scaffold00003 569011 1 . A scaffold6524 ScafM SNP 0002.scaffold00003 569014 1 G A scaffold6524 ScafM INDEL 0002.scaffold00003 569015 3 ... TTC scaffold6524 ScafM SNP 0002.scaffold00003 569079 1 A G scaffold6524 ScafM SNP 0002.scaffold00003 569083 2 TC CT scaffold6524 ScafM SNP 0002.scaffold00003 569096 1 C T scaffold6524 ScafM SNP 0002.scaffold00003 569129 1 A T scaffold6524 ScafM SNP 0002.scaffold00003 569640 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 569643 1 G T scaffold17142 ScafM SNP 0002.scaffold00003 569745 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 569761 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 570255 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 570283 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 570291 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 570312 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 570338 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 570378 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 570381 3 GCA TAC scaffold17142 ScafM SNP 0002.scaffold00003 570417 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 570442 2 TT CA scaffold17142 ScafM INDEL 0002.scaffold00003 570451 2 AA .. scaffold17142 ScafM SNP 0002.scaffold00003 570467 3 AAA GGT scaffold17142 ScafM SNP 0002.scaffold00003 570489 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 570491 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 570522 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 570525 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 570547 1 G T scaffold17142 ScafM SNP 0002.scaffold00003 570601 1 G C scaffold17142 ScafM SNP 0002.scaffold00003 570622 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 570626 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 570651 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 570682 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 570714 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 570729 1 T C scaffold17142 ScafM INDEL 0002.scaffold00003 570757 1 G . scaffold17142 ScafM SNP 0002.scaffold00003 570802 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 570917 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 570936 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 570946 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 570958 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 570972 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 571002 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 571048 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571060 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 571097 1 T G scaffold17142 ScafM SNP 0002.scaffold00003 571122 1 G C scaffold17142 ScafM SNP 0002.scaffold00003 571143 2 CG TA scaffold17142 ScafM SNP 0002.scaffold00003 571157 1 T G scaffold17142 ScafM SNP 0002.scaffold00003 571159 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 571182 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 571195 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571223 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 571232 1 T C scaffold17142 ScafM INDEL 0002.scaffold00003 571256 1 C . scaffold17142 ScafM INDEL 0002.scaffold00003 571263 2 .C TT scaffold17142 ScafM SNP 0002.scaffold00003 571274 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571289 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 571300 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 571304 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 571321 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 571369 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 571373 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 571385 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571420 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571461 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 571466 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 571502 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571514 1 C T scaffold17142 ScafM INDEL 0002.scaffold00003 571522 28 CTATTAAATTCATTAATTTCGACTCAAA ............................ scaffold17142 ScafM SNP 0002.scaffold00003 571618 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 571662 1 G A scaffold17142 ScafM INDEL 0002.scaffold00003 571741 1 G . scaffold17142 ScafM SNP 0002.scaffold00003 571763 1 T G scaffold17142 ScafM INDEL 0002.scaffold00003 571771 2 AA .. scaffold17142 ScafM SNP 0002.scaffold00003 571813 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 571816 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 571831 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 571856 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 571864 1 A G scaffold17142 ScafM INDEL 0002.scaffold00003 571895 7 GGAGCTT ....... scaffold17142 ScafM SNP 0002.scaffold00003 572003 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 572096 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 572112 2 GT AC scaffold17142 ScafM INDEL 0002.scaffold00003 572132 18 CTCGAGTTGACATTATGC .................. scaffold17142 ScafM INDEL 0002.scaffold00003 572153 3 ACA ... scaffold17142 ScafM SNP 0002.scaffold00003 572203 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 572243 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572278 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 572286 1 C T scaffold17142 ScafM INDEL 0002.scaffold00003 572331 1 . C scaffold17142 ScafM SNP 0002.scaffold00003 572369 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572408 1 C T scaffold17142 ScafM INDEL 0002.scaffold00003 572433 1 A . scaffold17142 ScafM SNP 0002.scaffold00003 572436 1 T G scaffold17142 ScafM SNP 0002.scaffold00003 572451 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 572455 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 572469 1 T G scaffold17142 ScafM SNP 0002.scaffold00003 572542 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 572551 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 572592 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572598 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572669 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572675 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 572684 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572751 1 T G scaffold17142 ScafM SNP 0002.scaffold00003 572798 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 572800 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 572835 1 T A scaffold17142 ScafM SNP 0002.scaffold00003 572858 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 572871 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 572883 1 G T scaffold17142 ScafM SNP 0002.scaffold00003 572886 1 A C scaffold17142 ScafM SNP 0002.scaffold00003 572889 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 572901 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 572947 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 572992 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 572997 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 573001 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 573011 1 G T scaffold17142 ScafM SNP 0002.scaffold00003 573051 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 573056 1 A G scaffold17142 ScafM SNP 0002.scaffold00003 573066 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 573082 1 G T scaffold17142 ScafM SNP 0002.scaffold00003 573093 3 CTG TAT scaffold17142 ScafM SNP 0002.scaffold00003 573104 1 C A scaffold17142 ScafM SNP 0002.scaffold00003 573126 1 C T scaffold17142 ScafM SNP 0002.scaffold00003 573131 1 A T scaffold17142 ScafM SNP 0002.scaffold00003 573157 2 AA GG scaffold17142 ScafM SNP 0002.scaffold00003 573165 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 573179 1 T C scaffold17142 ScafM SNP 0002.scaffold00003 573943 1 G A scaffold17142 ScafM SNP 0002.scaffold00003 585966 1 A C scaffold658 ReadM INDEL 0002.scaffold00003 591260 1 . T - ReadM INDEL 0002.scaffold00003 606614 1 A . - ScafM SNP 0002.scaffold00003 621144 1 G A scaffold4404 ScafM SNP 0002.scaffold00003 621182 2 CG AA scaffold4404 ScafM SNP 0002.scaffold00003 621197 1 G T scaffold4404 ScafM SNP 0002.scaffold00003 621230 1 C T scaffold4404 ScafM SNP 0002.scaffold00003 621288 2 GA AT scaffold4404 ScafM SNP 0002.scaffold00003 621312 1 C A scaffold4404 ScafM SNP 0002.scaffold00003 621352 1 A G scaffold4404 ScafM SNP 0002.scaffold00003 621440 1 C T scaffold4404 ScafM SNP 0002.scaffold00003 621459 1 A T scaffold4404 ScafM SNP 0002.scaffold00003 621461 1 A G scaffold4404 ScafM SNP 0002.scaffold00003 621532 1 C T scaffold4404 ScafM SNP 0002.scaffold00003 621535 1 A T scaffold4404 ScafM INDEL 0002.scaffold00003 624529 1 . A scaffold5910 ScafM INDEL 0002.scaffold00003 633047 1 A . scaffold3233 ScafM SNP 0002.scaffold00003 633096 1 C A scaffold3233 ScafM INDEL 0002.scaffold00003 633148 1 . A scaffold3233 ScafM INDEL 0002.scaffold00003 633173 1 . A scaffold3233 ScafM SNP 0002.scaffold00003 633270 1 T C scaffold3233 ScafM SNP 0002.scaffold00003 633282 1 T C scaffold3233 ScafM SNP 0002.scaffold00003 633368 1 A G scaffold3233 ScafM SNP 0002.scaffold00003 633387 1 C G scaffold3233 ScafM SNP 0002.scaffold00003 633424 1 G A scaffold3233 ScafM SNP 0002.scaffold00003 633441 1 T C scaffold3233 ScafM INDEL 0002.scaffold00003 633443 2 .. AA scaffold3233 ScafM SNP 0002.scaffold00003 633444 2 TC GA scaffold3233 ScafM SNP 0002.scaffold00003 633514 1 T G scaffold3233 ScafM INDEL 0002.scaffold00003 633536 5 GCAAC ..... scaffold3233 ScafM SNP 0002.scaffold00003 633548 1 G T scaffold3233 ScafM SNP 0002.scaffold00003 633551 1 C A scaffold3233 ScafM SNP 0002.scaffold00003 633714 1 G A scaffold3233 ScafM SNP 0002.scaffold00003 633721 1 T C scaffold3233 ScafM SNP 0002.scaffold00003 633732 1 A C scaffold3233 ScafM SNP 0002.scaffold00003 633736 1 T A scaffold3233 ScafM SNP 0002.scaffold00003 633739 1 G A scaffold3233 ScafM SNP 0002.scaffold00003 633765 1 G A scaffold3233 ScafM SNP 0002.scaffold00003 633785 1 T A scaffold3233 ScafM INDEL 0002.scaffold00003 633834 2 .. TA scaffold3233 ScafM SNP 0002.scaffold00003 633847 1 C T scaffold3233 ScafM SNP 0002.scaffold00003 633863 1 G T scaffold3233 ScafM SNP 0002.scaffold00003 633884 1 T C scaffold3233 ScafM SNP 0002.scaffold00003 691188 1 G C scaffold18428 ScafM SNP 0002.scaffold00003 691233 1 T C scaffold18428 ScafM SNP 0002.scaffold00003 691271 1 G T scaffold18428 ScafM SNP 0002.scaffold00003 691308 1 T C scaffold18428 ScafM SNP 0002.scaffold00003 691320 1 G C scaffold18428 ScafM INDEL 0002.scaffold00003 698171 5 ..... GGGGG scaffold18428 ScafM INDEL 0002.scaffold00003 707311 1 C . scaffold18428 ScafM INDEL 0002.scaffold00003 707333 2 CT .. scaffold18428 ScafM SNP 0002.scaffold00003 707370 1 C A scaffold18428 ScafM SNP 0002.scaffold00003 707438 1 C T scaffold18428 ScafM INDEL 0002.scaffold00003 740365 3 CCC ... scaffold6815 ReadM INDEL 0002.scaffold00003 746836 1 . A - ScafM SNP 0002.scaffold00003 753306 1 T G scaffold5656 ScafM SNP 0002.scaffold00003 753327 1 T A scaffold5656 ScafM SNP 0002.scaffold00003 753334 1 C A scaffold5656 ScafM SNP 0002.scaffold00003 753693 1 A G scaffold12404 ScafM SNP 0002.scaffold00003 753718 1 T C scaffold12404 ScafM SNP 0002.scaffold00003 798201 1 C T scaffold2135 ScafM SNP 0002.scaffold00003 798241 1 T G scaffold2135 ScafM SNP 0002.scaffold00003 798244 1 C T scaffold2135 ScafM SNP 0002.scaffold00003 798247 1 A T scaffold2135 ScafM SNP 0002.scaffold00003 798270 1 A T scaffold2135 ScafM SNP 0002.scaffold00003 798353 1 A T scaffold2135 ScafM SNP 0002.scaffold00003 798373 1 A G scaffold2135 ScafM SNP 0002.scaffold00003 798449 1 G A scaffold2135 ScafM SNP 0002.scaffold00003 798470 1 A C scaffold2135 ScafM SNP 0002.scaffold00003 805919 1 C T scaffold693 ScafM SNP 0002.scaffold00003 805947 1 A G scaffold693 ScafM SNP 0002.scaffold00003 805962 1 C T scaffold693 ScafM SNP 0002.scaffold00003 805979 1 C T scaffold693 ScafM SNP 0002.scaffold00003 805982 1 A G scaffold693 ScafM INDEL 0002.scaffold00003 806011 1 A . scaffold693 ScafM SNP 0002.scaffold00003 806022 1 A G scaffold693 ScafM SNP 0002.scaffold00003 806028 2 TT AA scaffold693 ScafM SNP 0002.scaffold00003 806043 1 C T scaffold693 ScafM SNP 0002.scaffold00003 806059 1 T G scaffold693 ScafM SNP 0002.scaffold00003 806066 1 T G scaffold693 ScafM SNP 0002.scaffold00003 806078 1 T A scaffold693 ScafM SNP 0002.scaffold00003 806095 1 C T scaffold693 ScafM SNP 0002.scaffold00003 806115 1 T A scaffold693 ScafM SNP 0002.scaffold00003 806139 1 A G scaffold693 ScafM SNP 0002.scaffold00003 806144 1 T C scaffold693 ScafM INDEL 0002.scaffold00003 806147 2 .. TT scaffold693 ScafM INDEL 0002.scaffold00003 806149 2 .. TA scaffold693 ScafM INDEL 0002.scaffold00003 806151 1 . A scaffold693 ScafM INDEL 0002.scaffold00003 806153 1 . C scaffold693 ScafM SNP 0002.scaffold00003 806263 1 C T scaffold693 ScafM SNP 0002.scaffold00003 806312 1 C T scaffold693 ScafM SNP 0002.scaffold00003 806325 1 G A scaffold693 ScafM INDEL 0002.scaffold00003 806336 1 . C scaffold693 ScafM SNP 0002.scaffold00003 806363 1 G A scaffold693 ScafM SNP 0002.scaffold00003 806381 1 C A scaffold693 ScafM SNP 0002.scaffold00003 806385 1 C A scaffold693 ScafM INDEL 0002.scaffold00003 806393 1 . C scaffold693 ScafM SNP 0002.scaffold00003 806421 1 T C scaffold693 ScafM SNP 0002.scaffold00003 806429 1 G A scaffold693 ScafM SNP 0002.scaffold00003 806451 1 C A scaffold693 ScafM SNP 0002.scaffold00003 806457 1 T G scaffold693 ScafM SNP 0002.scaffold00003 806467 1 T A scaffold693 ScafM SNP 0002.scaffold00003 806485 1 T A scaffold693 ScafM SNP 0002.scaffold00003 806491 1 A C scaffold693 ScafM SNP 0002.scaffold00003 806541 1 T C scaffold693 ScafM SNP 0002.scaffold00003 806545 1 C G scaffold693 ScafM SNP 0002.scaffold00003 806551 1 T G scaffold693 ScafM INDEL 0002.scaffold00003 806555 1 A . scaffold693 ScafM SNP 0002.scaffold00003 806560 1 A G scaffold693 ScafM SNP 0002.scaffold00003 806563 1 T G scaffold693 ScafM SNP 0002.scaffold00003 806589 1 A C scaffold693 ScafM INDEL 0002.scaffold00003 806592 1 . T scaffold693 ScafM INDEL 0002.scaffold00003 848943 1 . A scaffold26003 ScafM INDEL 0002.scaffold00003 899390 19 ................... CCCCCCCCCCCCCCCCCCA scaffold12199 ScafM SNP 0002.scaffold00003 899392 1 C A scaffold12199 Both INDEL 0002.scaffold00003 899565 1 . A scaffold12199 ReadM INDEL 0002.scaffold00003 916203 1 . A - ScafM SNP 0002.scaffold00003 921291 1 A G scaffold12199 ScafM SNP 0002.scaffold00003 921590 1 A G scaffold12199 ScafM SNP 0002.scaffold00003 921676 1 C G scaffold12199 ScafM SNP 0002.scaffold00003 946441 1 G A scaffold1256 ScafM SNP 0002.scaffold00003 946515 1 C T scaffold1256 ScafM SNP 0002.scaffold00003 946532 1 A T scaffold1256 ScafM SNP 0002.scaffold00003 946535 1 T C scaffold1256 ScafM INDEL 0002.scaffold00003 995533 2 AA .. scaffold1256 ScafM SNP 0002.scaffold00003 996554 2 GA TT scaffold1256 ScafM SNP 0002.scaffold00003 996557 1 G T scaffold1256 ScafM SNP 0002.scaffold00003 996560 3 GGC TTT scaffold1256 ScafM SNP 0002.scaffold00003 996565 1 C G scaffold1256 ScafM INDEL 0002.scaffold00003 996568 3 CAA .GG scaffold1256 ScafM INDEL 0002.scaffold00003 1007429 4 .... CCCC scaffold1256 ScafM SNP 0002.scaffold00003 1007431 2 GA CC scaffold1256 ScafM INDEL 0002.scaffold00003 1027781 1 . A scaffold1256 ScafM INDEL 0002.scaffold00003 1060379 1 . G scaffold1256 ReadM INDEL 0002.scaffold00003 1060462 1 . T - ScafM INDEL 0002.scaffold00003 1061946 1 . A scaffold1256 ScafM SNP 0002.scaffold00003 1064242 1 A C scaffold1256 ScafM INDEL 0002.scaffold00003 1064246 12 TTATGAAAGTTT .........CCC scaffold1256 ScafM INDEL 0002.scaffold00003 1064281 1 . T scaffold1256 ScafM INDEL 0002.scaffold00003 1066473 1 . T scaffold1256 ReadM INDEL 0002.scaffold00003 1070541 3 ... AAA - ScafM SNP 0002.scaffold00003 1171758 1 G C scaffold9836 ScafM SNP 0002.scaffold00003 1171833 1 T A scaffold9836 ScafM SNP 0002.scaffold00003 1172619 1 C A scaffold9836 ScafM SNP 0002.scaffold00003 1172957 1 A G scaffold9836 ScafM SNP 0002.scaffold00003 1173078 1 A G scaffold9836 ScafM SNP 0002.scaffold00003 1173175 1 T G scaffold9836 ScafM SNP 0002.scaffold00003 1173392 1 T C scaffold9836 ScafM INDEL 0002.scaffold00003 1182411 2 GG .. scaffold9836 ScafM SNP 0002.scaffold00003 1182425 1 T C scaffold9836 ScafM SNP 0002.scaffold00003 1182429 1 T A scaffold9836 ScafM INDEL 0002.scaffold00003 1201861 76 ............................................................................ TTTAATGATTTGAATTAATTATATACTACTTTGGGAAAGTAAAGGTGACATAACTTTTGAGCCTATTTAGGAGGTG scaffold9836 ScafM INDEL 0002.scaffold00003 1220053 1 G . scaffold1410 ScafM INDEL 0002.scaffold00003 1297960 1 . A scaffold18720 ScafM INDEL 0002.scaffold00003 1323342 57 AGGAAACTTCTTCTTTTTGTCACATATCATACCATGAAGTTCCCCCCCCCCCCCCCC ......................................................... scaffold18720 ScafM INDEL 0002.scaffold00003 1323403 2 CT .. scaffold18720 ScafM INDEL 0002.scaffold00003 1362956 6 ...... AAAAAA scaffold10542 ScafM SNP 0002.scaffold00003 1362977 1 T A scaffold10542 ScafM SNP 0002.scaffold00003 1433313 1 C T scaffold1005 ScafM SNP 0002.scaffold00003 1433457 1 C A scaffold1005 ScafM SNP 0002.scaffold00003 1433465 2 CC TA scaffold1005 ScafM SNP 0002.scaffold00003 1433618 1 G A scaffold1005 ScafM INDEL 0002.scaffold00003 1433713 1 A . scaffold1005 ReadM SNP 0002.scaffold00003 1438775 1 C T - ScafM SNP 0002.scaffold00003 1443556 1 G A scaffold1005 ScafM INDEL 0003.scaffold00019 13262 1 . T scaffold836 ReadM INDEL 0003.scaffold00019 36899 1 . T - ScafM SNP 0003.scaffold00019 159054 1 A T scaffold836 ScafM SNP 0003.scaffold00019 159235 1 A G scaffold836 ScafM SNP 0003.scaffold00019 159299 1 G A scaffold836 ScafM SNP 0003.scaffold00019 163256 1 T G scaffold9763 ScafM SNP 0003.scaffold00019 164619 1 C T scaffold6093 ScafM SNP 0003.scaffold00019 164633 1 G T scaffold6093 ScafM INDEL 0003.scaffold00019 164663 12 TTAAAAAAAAAA ............ scaffold6093 ReadM INDEL 0003.scaffold00019 164664 2 TA .. - ScafM SNP 0003.scaffold00019 164685 1 C A scaffold6093 ScafM SNP 0003.scaffold00019 164697 1 T C scaffold6093 ScafM SNP 0003.scaffold00019 164717 1 C T scaffold6093 ScafM SNP 0003.scaffold00019 164793 1 C G scaffold6093 ScafM SNP 0003.scaffold00019 164803 1 T C scaffold6093 ScafM SNP 0003.scaffold00019 164841 1 T C scaffold6093 ScafM INDEL 0003.scaffold00019 164882 1 . G scaffold6093 ScafM SNP 0003.scaffold00019 164887 1 A C scaffold6093 ScafM SNP 0003.scaffold00019 182032 1 A C scaffold1590 ScafM SNP 0003.scaffold00019 182112 1 C A scaffold1590 ScafM SNP 0003.scaffold00019 182239 1 G A scaffold1590 ScafM SNP 0003.scaffold00019 183542 1 A G scaffold791 ScafM SNP 0003.scaffold00019 183791 1 A G scaffold791 ScafM SNP 0003.scaffold00019 183981 1 A G scaffold791 ScafM SNP 0003.scaffold00019 183998 1 G C scaffold791 ScafM SNP 0003.scaffold00019 184044 1 G A scaffold791 ScafM INDEL 0003.scaffold00019 219449 1 A . scaffold10711 ScafM INDEL 0003.scaffold00019 226240 10 .......... GGGGGGGGGG scaffold10711 ScafM INDEL 0003.scaffold00019 226385 6 ...... GGGGGG scaffold10711 ScafM INDEL 0003.scaffold00019 227176 14 .............. TTAAAACCCCGGGG scaffold10711 ScafM SNP 0003.scaffold00019 227180 1 A G scaffold10711 ScafM SNP 0003.scaffold00019 227182 2 AT GG scaffold10711 ScafM INDEL 0003.scaffold00019 229912 1 T . scaffold10711 ReadM SNP 0003.scaffold00019 235184 1 T C - ScafM INDEL 0003.scaffold00019 239826 16 ................ AGAATGATGAGTTGTT scaffold5305 ScafM SNP 0003.scaffold00019 239835 1 C A scaffold5305 ScafM SNP 0003.scaffold00019 239898 1 T C scaffold5305 ScafM SNP 0003.scaffold00019 239929 1 C T scaffold5305 ScafM INDEL 0003.scaffold00019 239945 10 TGTTATACTC .......... scaffold5305 ScafM SNP 0003.scaffold00019 240068 1 A T scaffold5305 ScafM SNP 0003.scaffold00019 240325 1 T G scaffold5305 ReadM INDEL 0003.scaffold00019 245476 1 . A - ScafM SNP 0003.scaffold00019 259653 1 T G scaffold112 ScafM SNP 0003.scaffold00019 262631 1 G A scaffold1567 ScafM SNP 0003.scaffold00019 262633 1 A G scaffold1567 ScafM SNP 0003.scaffold00019 262637 1 G A scaffold1567 ScafM SNP 0003.scaffold00019 262648 1 C T scaffold1567 ScafM SNP 0003.scaffold00019 262663 2 GA AT scaffold1567 ScafM SNP 0003.scaffold00019 262673 1 G A scaffold1567 ScafM SNP 0003.scaffold00019 262690 1 G T scaffold1567 ScafM SNP 0003.scaffold00019 262702 1 C T scaffold1567 ScafM SNP 0003.scaffold00019 262704 1 A G scaffold1567 ScafM SNP 0003.scaffold00019 262723 1 G T scaffold1567 ScafM INDEL 0003.scaffold00019 262724 1 . T scaffold1567 ScafM SNP 0003.scaffold00019 262786 1 C A scaffold1567 ScafM SNP 0003.scaffold00019 262797 1 G A scaffold1567 ScafM SNP 0003.scaffold00019 262812 1 G T scaffold1567 ScafM SNP 0003.scaffold00019 262822 1 T G scaffold1567 ScafM SNP 0003.scaffold00019 262848 1 T C scaffold1567 ScafM SNP 0003.scaffold00019 262853 1 G C scaffold1567 ScafM SNP 0003.scaffold00019 262855 1 A T scaffold1567 ScafM SNP 0003.scaffold00019 262878 1 T C scaffold1567 ScafM INDEL 0003.scaffold00019 285889 1 . T scaffold1601 ReadM INDEL 0003.scaffold00019 327938 1 . T - ScafM SNP 0004.scaffold00019 4205 1 A G scaffold1840 ScafM SNP 0004.scaffold00019 4284 1 A G scaffold1840 ScafM SNP 0004.scaffold00019 4288 1 G A scaffold1840 ScafM SNP 0004.scaffold00019 4432 2 CA GG scaffold1840 ScafM SNP 0004.scaffold00019 4445 1 C A scaffold1840 ScafM SNP 0004.scaffold00019 4455 1 A G scaffold1840 ScafM SNP 0004.scaffold00019 4498 1 A T scaffold1840 ScafM SNP 0004.scaffold00019 4538 1 C G scaffold1840 ScafM SNP 0004.scaffold00019 4549 1 C T scaffold1840 ScafM SNP 0004.scaffold00019 4629 1 C T scaffold1840 ScafM SNP 0004.scaffold00019 4666 1 T C scaffold1840 ScafM SNP 0004.scaffold00019 4737 1 T G scaffold1840 ScafM SNP 0004.scaffold00019 4756 1 G T scaffold1840 ScafM SNP 0004.scaffold00019 4776 1 T A scaffold1840 ScafM SNP 0004.scaffold00019 5104 2 AA CG scaffold4438 ScafM SNP 0004.scaffold00019 5137 1 C T scaffold4438 ScafM SNP 0004.scaffold00019 5195 1 C T scaffold4438 ScafM SNP 0004.scaffold00019 5218 1 C A scaffold4438 ReadM SNP 0004.scaffold00019 17605 1 T C - ReadM SNP 0004.scaffold00019 17612 1 T A - ScafM SNP 0004.scaffold00019 21863 1 C T scaffold11757 ScafM SNP 0004.scaffold00019 21936 1 G A scaffold11757 ScafM SNP 0004.scaffold00019 24578 1 C G scaffold11757 ScafM SNP 0004.scaffold00019 24736 1 A G scaffold11757 ScafM SNP 0004.scaffold00019 25269 1 T C scaffold12677 ScafM SNP 0004.scaffold00019 25412 1 A G scaffold12677 ScafM SNP 0004.scaffold00019 25690 1 C T scaffold9831 ScafM SNP 0004.scaffold00019 25692 1 T G scaffold9831 ScafM SNP 0004.scaffold00019 25713 1 C A scaffold9831 ScafM SNP 0004.scaffold00019 25769 1 C T scaffold9831 ScafM SNP 0004.scaffold00019 25784 1 T A scaffold9831 ScafM SNP 0004.scaffold00019 25805 1 G A scaffold9831 ScafM SNP 0004.scaffold00019 26004 1 T C scaffold9831 ScafM SNP 0004.scaffold00019 26033 1 T A scaffold9831 ScafM SNP 0004.scaffold00019 26074 1 T A scaffold9831 ScafM SNP 0004.scaffold00019 26084 1 G C scaffold9831 ScafM SNP 0004.scaffold00019 30104 1 A G scaffold16711 ScafM SNP 0004.scaffold00019 35674 1 C T scaffold16711 ScafM SNP 0004.scaffold00019 35760 1 C T scaffold16711 ScafM SNP 0004.scaffold00019 35806 1 G A scaffold16711 ReadM SNP 0004.scaffold00019 57222 1 T C - ScafM SNP 0004.scaffold00019 66508 1 G A scaffold12031 ScafM SNP 0004.scaffold00019 66529 1 G A scaffold12031 ReadM SNP 0004.scaffold00019 89226 1 A G - ScafM SNP 0004.scaffold00019 95219 1 C A scaffold12898 ReadM SNP 0004.scaffold00019 100683 1 C T - ReadM INDEL 0004.scaffold00019 142968 2 .. TT - ScafM SNP 0004.scaffold00019 195692 3 TCT AGA scaffold4701 ScafM INDEL 0004.scaffold00019 195696 1 C . scaffold4701 ScafM INDEL 0004.scaffold00019 195699 1 C . scaffold4701 ScafM SNP 0004.scaffold00019 195703 2 CT GA scaffold4701 ScafM INDEL 0004.scaffold00019 195706 1 . G scaffold4701 ScafM INDEL 0004.scaffold00019 195709 1 C . scaffold4701 ScafM INDEL 0004.scaffold00019 197154 1 . T scaffold4701 ScafM INDEL 0004.scaffold00019 199680 18 .................. CCACTGTCCATTAATTAT scaffold4701 ScafM SNP 0004.scaffold00019 240417 1 A G scaffold25665 ScafM SNP 0004.scaffold00019 240452 1 A C scaffold25665 ScafM SNP 0004.scaffold00019 240484 1 T A scaffold25665 ScafM SNP 0004.scaffold00019 240497 1 A C scaffold25665 ScafM SNP 0004.scaffold00019 240500 1 A G scaffold25665 ScafM SNP 0004.scaffold00019 240510 1 T A scaffold25665 ScafM SNP 0004.scaffold00019 240531 1 G T scaffold25665 ScafM SNP 0004.scaffold00019 240549 1 G A scaffold25665 ScafM SNP 0004.scaffold00019 240557 1 G T scaffold25665 ScafM SNP 0004.scaffold00019 240567 1 A C scaffold25665 ScafM INDEL 0004.scaffold00019 240570 1 T . scaffold25665 ScafM SNP 0004.scaffold00019 240600 1 C T scaffold25665 ScafM SNP 0004.scaffold00019 240611 1 G A scaffold25665 ScafM INDEL 0004.scaffold00019 240624 1 C . scaffold25665 ScafM SNP 0004.scaffold00019 240657 1 T G scaffold25665 ScafM SNP 0004.scaffold00019 240662 1 C T scaffold25665 ScafM SNP 0004.scaffold00019 240684 1 T C scaffold25665 ScafM SNP 0004.scaffold00019 240691 1 T C scaffold25665 ScafM SNP 0004.scaffold00019 240706 1 T C scaffold25665 ScafM SNP 0004.scaffold00019 240711 2 GG CC scaffold25665 ScafM SNP 0004.scaffold00019 240715 1 C T scaffold25665 ScafM SNP 0004.scaffold00019 258290 1 C T scaffold7467 ScafM SNP 0004.scaffold00019 258305 3 TGC ATA scaffold7467 ScafM INDEL 0004.scaffold00019 258313 1 T . scaffold7467 ScafM SNP 0004.scaffold00019 258354 1 C A scaffold7467 ScafM INDEL 0004.scaffold00019 279986 38 ...................................... GACTTTGCAGCAGGAAATTTTGCTGGGTTTCTTCTCTT scaffold5343 ScafM INDEL 0004.scaffold00019 280032 13 ............. ACCCAAAACGCAG scaffold5343 Both INDEL 0004.scaffold00019 306090 1 . A scaffold5343 ScafM INDEL 0004.scaffold00019 313943 69 ..................................................................... TAGCAATAACACTAGCAGTCATAATTCTTCTTCTAAATTTACTGCCTTTATGTCTTCTTTGTAGCCATC scaffold5343 ScafM INDEL 0004.scaffold00019 318371 1 . T scaffold5343 ReadM INDEL 0004.scaffold00019 324079 1 . A - ScafM INDEL 0004.scaffold00019 326639 1 T . scaffold5343 ScafM SNP 0004.scaffold00019 326754 1 G A scaffold5343 ScafM SNP 0004.scaffold00019 334959 1 T G scaffold5343 ScafM INDEL 0004.scaffold00019 334980 1 G . scaffold5343 ScafM INDEL 0004.scaffold00019 334988 8 ........ TAATTTAA scaffold5343 ScafM INDEL 0004.scaffold00019 334990 13 ............. AAATTTTATTAAT scaffold5343 ReadM INDEL 0004.scaffold00019 354781 1 . A - ScafM INDEL 0004.scaffold00019 390315 1 . C scaffold8637 ScafM INDEL 0004.scaffold00019 390334 1 C . scaffold8637 ScafM INDEL 0004.scaffold00019 390343 1 A . scaffold8637 ScafM INDEL 0004.scaffold00019 390358 1 A . scaffold8637 ScafM INDEL 0004.scaffold00019 390363 1 C . scaffold8637 ScafM INDEL 0004.scaffold00019 390373 2 AC .. scaffold8637 ScafM INDEL 0004.scaffold00019 390393 2 AC .. scaffold8637 ScafM INDEL 0004.scaffold00019 394423 1 T . scaffold8637 ScafM SNP 0004.scaffold00019 394426 1 A T scaffold8637 ScafM SNP 0004.scaffold00019 394430 2 TT GC scaffold8637 ScafM SNP 0004.scaffold00019 394433 1 G C scaffold8637 ScafM SNP 0004.scaffold00019 419800 1 T A scaffold6714 ReadM SNP 0004.scaffold00019 438944 1 G T - ScafM SNP 0004.scaffold00019 479076 1 G A scaffold14096 ScafM SNP 0004.scaffold00019 479082 1 T C scaffold14096 ScafM SNP 0004.scaffold00019 484277 1 T C scaffold2766 ScafM INDEL 0004.scaffold00019 484324 3 ... TAA scaffold2766 ScafM SNP 0004.scaffold00019 484335 1 G A scaffold2766 ScafM SNP 0004.scaffold00019 484372 1 T A scaffold2766 ScafM SNP 0004.scaffold00019 484405 1 T C scaffold2766 ScafM SNP 0004.scaffold00019 484447 2 GT AC scaffold2766 ScafM SNP 0004.scaffold00019 484523 1 G A scaffold2766 ScafM SNP 0004.scaffold00019 484528 1 T A scaffold2766 ScafM SNP 0004.scaffold00019 484539 1 C A scaffold2766 ScafM INDEL 0004.scaffold00019 518417 1 . A scaffold4296 ScafM SNP 0004.scaffold00019 523188 1 A C scaffold4296 ScafM SNP 0004.scaffold00019 523222 1 T C scaffold4296 ScafM INDEL 0004.scaffold00019 541029 1 . A scaffold4296 ScafM INDEL 0004.scaffold00019 543123 1 . T scaffold4296 ReadM INDEL 0004.scaffold00019 543159 1 . A - ReadM SNP 0004.scaffold00019 579240 1 A G - ReadM SNP 0004.scaffold00019 601203 1 C T - ScafM SNP 0004.scaffold00019 603993 1 T A scaffold4296 ScafM SNP 0004.scaffold00019 608707 1 T C scaffold4296 ReadM SNP 0004.scaffold00019 616661 1 A G - ReadM SNP 0004.scaffold00019 616665 1 C A - ReadM SNP 0004.scaffold00019 616696 1 G A - ReadM SNP 0004.scaffold00019 643101 1 C T - ScafM INDEL 0004.scaffold00019 649981 1 A . scaffold344 ReadM SNP 0004.scaffold00019 655913 1 A G - ReadM INDEL 0004.scaffold00019 672722 1 . T - ScafM SNP 0004.scaffold00019 681785 1 A G scaffold678 ScafM SNP 0004.scaffold00019 681831 1 G A scaffold678 ScafM SNP 0004.scaffold00019 681892 1 A G scaffold678 ScafM INDEL 0004.scaffold00019 682529 1 T . scaffold678 ScafM SNP 0004.scaffold00019 690238 1 T G scaffold678 ScafM SNP 0004.scaffold00019 693615 1 G A scaffold678 ScafM SNP 0004.scaffold00019 693622 1 T C scaffold678 ScafM SNP 0004.scaffold00019 693668 1 C G scaffold678 ScafM SNP 0004.scaffold00019 693670 1 G A scaffold678 ScafM INDEL 0004.scaffold00019 693695 1 A . scaffold678 ScafM INDEL 0004.scaffold00019 693751 4 ATAT .... scaffold678 ScafM SNP 0004.scaffold00019 693772 1 T A scaffold678 ScafM SNP 0004.scaffold00019 693776 1 A G scaffold678 ScafM SNP 0004.scaffold00019 693806 1 A G scaffold678 ReadM INDEL 0004.scaffold00019 694019 2 TT .. - ScafM SNP 0004.scaffold00019 694311 1 A G scaffold678 ScafM SNP 0004.scaffold00019 694360 1 A T scaffold678 ScafM SNP 0004.scaffold00019 694399 1 G A scaffold678 ScafM SNP 0004.scaffold00019 694874 1 T C scaffold678 ScafM INDEL 0004.scaffold00019 694880 4 .... CTTG scaffold678 ScafM SNP 0004.scaffold00019 694958 1 T C scaffold678 ScafM SNP 0004.scaffold00019 694960 1 T C scaffold678 ScafM SNP 0004.scaffold00019 694963 1 T C scaffold678 ScafM SNP 0004.scaffold00019 695051 1 G A scaffold678 ScafM SNP 0004.scaffold00019 695060 1 A G scaffold678 ScafM SNP 0004.scaffold00019 695078 1 T G scaffold678 ScafM SNP 0004.scaffold00019 700171 1 A G scaffold678 ScafM SNP 0004.scaffold00019 701020 1 T A scaffold11374 ScafM SNP 0004.scaffold00019 701024 1 C T scaffold11374 ScafM SNP 0004.scaffold00019 701026 1 G C scaffold11374 ScafM SNP 0004.scaffold00019 701036 1 A C scaffold11374 ScafM SNP 0004.scaffold00019 701053 1 A G scaffold11374 ScafM SNP 0004.scaffold00019 701059 2 CC TT scaffold11374 ScafM SNP 0004.scaffold00019 701127 1 G A scaffold11374 ScafM SNP 0004.scaffold00019 701154 1 T C scaffold11374 ScafM SNP 0004.scaffold00019 701166 1 G A scaffold11374 ScafM SNP 0004.scaffold00019 701217 2 TA AT scaffold11374 ScafM SNP 0004.scaffold00019 701283 1 T A scaffold11374 ScafM SNP 0004.scaffold00019 701343 1 G C scaffold11374 ScafM SNP 0004.scaffold00019 701351 1 A T scaffold11374 ScafM SNP 0004.scaffold00019 701533 1 G T scaffold11374 ScafM SNP 0004.scaffold00019 701583 2 AA TT scaffold11374 ScafM SNP 0004.scaffold00019 701603 1 G C scaffold11374 ScafM SNP 0004.scaffold00019 702643 1 C T scaffold678 ScafM INDEL 0004.scaffold00019 702697 1 . A scaffold678 ScafM SNP 0004.scaffold00019 702699 1 G A scaffold678 ScafM SNP 0004.scaffold00019 702701 1 T C scaffold678 ScafM SNP 0004.scaffold00019 702806 1 C G scaffold678 ScafM SNP 0004.scaffold00019 702848 1 C T scaffold678 ScafM SNP 0004.scaffold00019 702857 1 C T scaffold678 ScafM SNP 0004.scaffold00019 702885 1 A G scaffold678 ScafM SNP 0004.scaffold00019 702907 1 A G scaffold678 ScafM SNP 0004.scaffold00019 702911 1 T C scaffold678 ScafM SNP 0004.scaffold00019 702919 1 C T scaffold678 ScafM SNP 0004.scaffold00019 702935 1 G A scaffold678 ScafM SNP 0004.scaffold00019 702959 1 G A scaffold678 ScafM INDEL 0004.scaffold00019 702961 1 A . scaffold678 ScafM INDEL 0004.scaffold00019 703038 12 ............ TGTGCCACTGAA scaffold678 ScafM SNP 0004.scaffold00019 703311 1 G A scaffold678 ScafM SNP 0004.scaffold00019 703330 1 G A scaffold678 ScafM SNP 0004.scaffold00019 703388 1 C A scaffold678 ScafM SNP 0004.scaffold00019 703804 1 A G scaffold678 ScafM SNP 0004.scaffold00019 703820 1 A G scaffold678 ScafM SNP 0004.scaffold00019 703833 1 G A scaffold678 ScafM SNP 0004.scaffold00019 703871 1 A G scaffold678 ScafM SNP 0004.scaffold00019 704365 1 C T scaffold678 ScafM INDEL 0004.scaffold00019 714154 1 . T scaffold678 ScafM INDEL 0004.scaffold00019 722921 1 . T scaffold678 ReadM INDEL 0004.scaffold00019 729079 1 . T - ReadM INDEL 0004.scaffold00019 747243 1 . A - ReadM INDEL 0004.scaffold00019 747252 1 . A - ScafM INDEL 0004.scaffold00019 747454 2 .. AT scaffold13762 Both INDEL 0004.scaffold00019 747765 1 . A scaffold13762 ScafM SNP 0004.scaffold00019 753919 1 T A scaffold13762 ScafM SNP 0004.scaffold00019 753989 1 G A scaffold13762 ScafM INDEL 0004.scaffold00019 754517 1 T . scaffold13762 ScafM INDEL 0004.scaffold00019 761924 1 . T scaffold13762 ScafM SNP 0004.scaffold00019 761946 1 A G scaffold13762 ScafM SNP 0004.scaffold00019 761967 1 C T scaffold13762 ScafM INDEL 0004.scaffold00019 762327 1 T . scaffold13762 ScafM INDEL 0004.scaffold00019 778055 1 G . scaffold13762 ReadM SNP 0005.scaffold00021 879 1 T C - ScafM SNP 0005.scaffold00021 1072 1 T C scaffold2404 ScafM SNP 0005.scaffold00021 1170 1 C T scaffold2404 Both SNP 0005.scaffold00021 1254 1 C T scaffold2404 ScafM SNP 0005.scaffold00021 1351 1 G A scaffold2404 ScafM SNP 0005.scaffold00021 1466 1 C T scaffold2404 ReadM SNP 0005.scaffold00021 6335 1 G A - ReadM SNP 0005.scaffold00021 6625 1 A T - ReadM SNP 0005.scaffold00021 6698 1 T A - ReadM SNP 0005.scaffold00021 6831 1 G C - ReadM SNP 0005.scaffold00021 6893 1 A G - ReadM INDEL 0005.scaffold00021 7230 1 . C - ScafM INDEL 0005.scaffold00021 7636 1 . T scaffold2404 Both SNP 0005.scaffold00021 7677 1 G A scaffold2404 Both INDEL 0005.scaffold00021 7786 1 . T scaffold2404 ScafM SNP 0005.scaffold00021 7796 1 C T scaffold2404 ReadM SNP 0005.scaffold00021 8135 1 G A - ReadM SNP 0005.scaffold00021 8299 1 T C - Both INDEL 0005.scaffold00021 9153 1 . T scaffold2404 ScafM INDEL 0005.scaffold00021 9358 26 GGGGAGGGTGCAAAAACTGTGGGGTT .......................... scaffold2404 ScafM SNP 0005.scaffold00021 11226 1 A T scaffold2404 ScafM SNP 0005.scaffold00021 11617 1 T C scaffold2404 Both SNP 0005.scaffold00021 12754 1 C T scaffold2404 ReadM SNP 0005.scaffold00021 12905 1 T C - Both SNP 0005.scaffold00021 13518 1 G C scaffold2404 Both SNP 0005.scaffold00021 13586 1 G T scaffold2404 Both SNP 0005.scaffold00021 13700 1 T A scaffold2404 Both SNP 0005.scaffold00021 13729 1 C T scaffold2404 ScafM SNP 0005.scaffold00021 14299 1 C T scaffold2404 ScafM SNP 0005.scaffold00021 14301 1 G T scaffold2404 ReadM SNP 0005.scaffold00021 15290 1 C T - ReadM SNP 0005.scaffold00021 15712 1 G A - ReadM SNP 0005.scaffold00021 16301 1 T G - ReadM SNP 0005.scaffold00021 16328 1 G A - ReadM SNP 0005.scaffold00021 16533 1 G C - ScafM SNP 0005.scaffold00021 18148 1 T C scaffold2404 ReadM SNP 0005.scaffold00021 18565 1 A T - ReadM SNP 0005.scaffold00021 18775 1 A G - Both SNP 0005.scaffold00021 20431 1 C G scaffold2404 Both SNP 0005.scaffold00021 20500 1 T A scaffold2404 ReadM SNP 0005.scaffold00021 20924 1 C T - Both SNP 0005.scaffold00021 21203 1 T C scaffold2404 ScafM SNP 0005.scaffold00021 21516 1 G A scaffold2404 ReadM INDEL 0005.scaffold00021 21598 1 G . - Both SNP 0005.scaffold00021 21674 1 T G scaffold2404 ScafM SNP 0005.scaffold00021 21732 1 G A scaffold2404 Both INDEL 0005.scaffold00021 21762 1 . G scaffold2404 ReadM SNP 0005.scaffold00021 22086 1 T C - ReadM SNP 0005.scaffold00021 22832 1 C T - ReadM SNP 0005.scaffold00021 22937 1 A T - ReadM SNP 0005.scaffold00021 23221 1 T C - Both SNP 0005.scaffold00021 23435 1 G A scaffold2404 Both SNP 0005.scaffold00021 23585 1 T A scaffold2404 Both SNP 0005.scaffold00021 23683 1 C A scaffold2404 ScafM SNP 0005.scaffold00021 23849 1 T C scaffold2404 ScafM INDEL 0005.scaffold00021 24152 1 T . scaffold2404 ScafM SNP 0005.scaffold00021 24166 1 G T scaffold2404 ReadM INDEL 0005.scaffold00021 24856 1 T . - ReadM SNP 0005.scaffold00021 25018 1 C T - ReadM SNP 0005.scaffold00021 25353 1 G T - ReadM SNP 0005.scaffold00021 25553 1 A G - Both SNP 0005.scaffold00021 26469 1 T C scaffold16258 ReadM SNP 0005.scaffold00021 26588 1 A G - ReadM SNP 0005.scaffold00021 26618 1 T C - ReadM SNP 0005.scaffold00021 27009 1 G T - Both SNP 0005.scaffold00021 27191 1 A T scaffold16258 Both SNP 0005.scaffold00021 27425 1 T C scaffold16258 ReadM SNP 0005.scaffold00021 27649 1 G A - ReadM SNP 0005.scaffold00021 27667 1 A G - ReadM SNP 0005.scaffold00021 27683 1 G A - ReadM SNP 0005.scaffold00021 27787 1 A G - ReadM SNP 0005.scaffold00021 27894 1 A T - ReadM SNP 0005.scaffold00021 27917 1 A G - ReadM SNP 0005.scaffold00021 27935 1 T A - ReadM SNP 0005.scaffold00021 28019 1 C T - ReadM SNP 0005.scaffold00021 28032 1 C T - ReadM SNP 0005.scaffold00021 28231 1 A T - ReadM SNP 0005.scaffold00021 28903 1 T C - ReadM SNP 0005.scaffold00021 28966 1 A C - Both SNP 0005.scaffold00021 29733 1 A G scaffold16258 ReadM INDEL 0005.scaffold00021 29837 1 A . - ReadM SNP 0005.scaffold00021 29905 1 G T - ReadM SNP 0005.scaffold00021 30367 1 T C - ReadM SNP 0005.scaffold00021 31059 1 T C - ReadM SNP 0005.scaffold00021 31066 1 A G - ReadM SNP 0005.scaffold00021 31545 1 T C - ReadM SNP 0005.scaffold00021 31930 1 C T - ReadM SNP 0005.scaffold00021 32283 1 C T - ReadM SNP 0005.scaffold00021 32512 1 T C - ReadM SNP 0005.scaffold00021 32766 1 A G - ReadM SNP 0005.scaffold00021 32834 1 A G - ReadM SNP 0005.scaffold00021 33319 1 C T - ReadM SNP 0005.scaffold00021 33324 1 C T - Both SNP 0005.scaffold00021 33444 1 T C scaffold16258 Both SNP 0005.scaffold00021 33510 1 C T scaffold16258 Both INDEL 0005.scaffold00021 33644 1 A . scaffold16258 ReadM SNP 0005.scaffold00021 34236 1 A T - ReadM SNP 0005.scaffold00021 34465 1 A G - ReadM SNP 0005.scaffold00021 35666 1 G T - ReadM SNP 0005.scaffold00021 35677 1 A G - ReadM SNP 0005.scaffold00021 35771 1 T G - ReadM SNP 0005.scaffold00021 35782 1 G A - ReadM SNP 0005.scaffold00021 35846 1 T C - ReadM SNP 0005.scaffold00021 35874 1 T C - ReadM SNP 0005.scaffold00021 36387 1 T G - ReadM SNP 0005.scaffold00021 37258 1 C A - ReadM SNP 0005.scaffold00021 38548 1 C T - ReadM SNP 0005.scaffold00021 38554 1 A C - ReadM SNP 0005.scaffold00021 38596 1 G C - ReadM SNP 0005.scaffold00021 38624 1 T C - ReadM SNP 0005.scaffold00021 38832 1 A C - ReadM SNP 0005.scaffold00021 39303 1 C T - Both SNP 0005.scaffold00021 39466 1 G A scaffold17671 ScafM SNP 0005.scaffold00021 39577 1 C A scaffold17671 ReadM SNP 0005.scaffold00021 40195 1 C T - ReadM SNP 0005.scaffold00021 42165 1 G C - ReadM SNP 0005.scaffold00021 42459 1 T C - ReadM SNP 0005.scaffold00021 42602 1 A G - ReadM SNP 0005.scaffold00021 42623 1 C A - ReadM SNP 0005.scaffold00021 42695 1 T C - ReadM INDEL 0005.scaffold00021 42773 3 AAA ... - ReadM INDEL 0005.scaffold00021 42843 2 .. TT - ReadM SNP 0005.scaffold00021 43931 1 A T - ReadM SNP 0005.scaffold00021 44320 1 G A - ReadM INDEL 0005.scaffold00021 44363 1 . T - ReadM SNP 0005.scaffold00021 44965 1 T C - ReadM SNP 0005.scaffold00021 45106 1 T A - Both SNP 0005.scaffold00021 45583 1 T C scaffold13820 ReadM SNP 0005.scaffold00021 46394 1 A T - ReadM SNP 0005.scaffold00021 46507 1 T C - ReadM SNP 0005.scaffold00021 46749 1 G A - ReadM SNP 0005.scaffold00021 47663 1 A C - ReadM SNP 0005.scaffold00021 47837 1 G C - ReadM SNP 0005.scaffold00021 47955 1 T G - ReadM SNP 0005.scaffold00021 48233 1 T C - ReadM SNP 0005.scaffold00021 48621 1 C T - ReadM SNP 0005.scaffold00021 48782 1 T A - Both SNP 0005.scaffold00021 50005 1 A G scaffold13820 ReadM SNP 0005.scaffold00021 50085 1 T A - ReadM SNP 0005.scaffold00021 50261 1 C A - Both SNP 0005.scaffold00021 50377 1 C T scaffold13820 Both SNP 0005.scaffold00021 50383 1 A C scaffold13820 Both SNP 0005.scaffold00021 50680 1 C T scaffold13820 Both SNP 0005.scaffold00021 50818 1 C T scaffold13820 Both SNP 0005.scaffold00021 50859 1 A T scaffold13820 ReadM SNP 0005.scaffold00021 50967 1 G A - ReadM SNP 0005.scaffold00021 51065 1 G A - ReadM SNP 0005.scaffold00021 51074 1 T A - Both SNP 0005.scaffold00021 51217 1 T G scaffold13820 ReadM SNP 0005.scaffold00021 54822 1 G T - ReadM INDEL 0005.scaffold00021 55048 2 AC .. - Both SNP 0005.scaffold00021 55553 1 G A scaffold13820 Both SNP 0005.scaffold00021 55942 1 A T scaffold13820 Both SNP 0005.scaffold00021 56115 1 T A scaffold13820 ReadM SNP 0005.scaffold00021 56878 1 T C - Both SNP 0005.scaffold00021 57030 1 T G scaffold13820 ReadM SNP 0005.scaffold00021 57130 1 G T - ScafM SNP 0005.scaffold00021 57544 1 T A scaffold13820 Both SNP 0005.scaffold00021 57599 1 G A scaffold13820 Both SNP 0005.scaffold00021 58075 1 C T scaffold13820 Both SNP 0005.scaffold00021 58814 1 T C scaffold13820 Both SNP 0005.scaffold00021 59184 1 T C scaffold13820 Both SNP 0005.scaffold00021 59677 1 C T scaffold13820 Both SNP 0005.scaffold00021 59771 1 A G scaffold13820 Both INDEL 0005.scaffold00021 59843 2 AT .. scaffold13820 ReadM SNP 0005.scaffold00021 60209 1 A G - Both INDEL 0005.scaffold00021 62241 3 ... TTG scaffold13820 ScafM INDEL 0005.scaffold00021 62309 36 .................................... ACTTCTTTTTCCATAGACTTAGGCAAATCAGTAATG scaffold13820 ScafM SNP 0005.scaffold00021 62524 1 C G scaffold13820 ScafM SNP 0005.scaffold00021 62527 1 T C scaffold13820 ScafM SNP 0005.scaffold00021 62530 1 G A scaffold13820 ScafM SNP 0005.scaffold00021 62532 1 A G scaffold13820 Both SNP 0005.scaffold00021 63049 1 A G scaffold13820 Both SNP 0005.scaffold00021 63090 1 C T scaffold13820 ScafM SNP 0005.scaffold00021 63097 1 C A scaffold13820 ReadM SNP 0005.scaffold00021 63459 1 C G - ReadM SNP 0005.scaffold00021 63570 1 C G - ReadM SNP 0005.scaffold00021 63609 1 T C - ReadM SNP 0005.scaffold00021 63612 1 G A - ReadM SNP 0005.scaffold00021 63794 1 T A - ReadM SNP 0005.scaffold00021 63936 1 C T - ReadM SNP 0005.scaffold00021 64016 1 T A - ReadM SNP 0005.scaffold00021 64408 1 C T - ReadM SNP 0005.scaffold00021 64515 1 T C - ReadM SNP 0005.scaffold00021 64743 1 A G - ReadM SNP 0005.scaffold00021 65013 1 T A - ReadM SNP 0005.scaffold00021 65114 1 C T - ReadM SNP 0005.scaffold00021 65235 1 T A - ReadM SNP 0005.scaffold00021 65795 1 A G - ReadM SNP 0005.scaffold00021 65805 1 T G - ReadM SNP 0005.scaffold00021 65832 1 T C - ReadM INDEL 0005.scaffold00021 66246 1 C . - Both SNP 0005.scaffold00021 66709 1 C T scaffold25897 ReadM SNP 0005.scaffold00021 66737 1 T A - ScafM INDEL 0005.scaffold00021 66842 25 ACTGCTGAACCACCGACCACCACCC ......................... scaffold25897 ScafM SNP 0005.scaffold00021 67038 1 A C scaffold25897 ScafM SNP 0005.scaffold00021 67041 1 T A scaffold25897 ScafM SNP 0005.scaffold00021 67107 1 G A scaffold25897 ScafM INDEL 0005.scaffold00021 67150 13 ATACCCACCCAAA ............. scaffold25897 ScafM SNP 0005.scaffold00021 67181 1 C T scaffold25897 ScafM SNP 0005.scaffold00021 67185 1 A G scaffold25897 ScafM SNP 0005.scaffold00021 67191 1 T C scaffold25897 ScafM SNP 0005.scaffold00021 67356 1 C T scaffold25897 ScafM SNP 0005.scaffold00021 67372 1 A C scaffold25897 ScafM SNP 0005.scaffold00021 67380 1 T C scaffold25897 ReadM INDEL 0005.scaffold00021 67417 1 . A - ScafM INDEL 0005.scaffold00021 67424 6 ...... AAAGAG scaffold25897 ScafM INDEL 0005.scaffold00021 67432 2 .. TA scaffold25897 ScafM SNP 0005.scaffold00021 67439 1 A G scaffold25897 ScafM SNP 0005.scaffold00021 67533 2 AC GA scaffold25897 ReadM SNP 0005.scaffold00021 67534 1 C A - ScafM SNP 0005.scaffold00021 67537 1 T C scaffold25897 ScafM SNP 0005.scaffold00021 67543 1 G A scaffold25897 ReadM SNP 0005.scaffold00021 68098 1 A G - ScafM SNP 0005.scaffold00021 68271 1 G A scaffold31849 ScafM SNP 0005.scaffold00021 68294 1 T C scaffold31849 ScafM SNP 0005.scaffold00021 68307 1 G A scaffold31849 Both SNP 0005.scaffold00021 68315 1 G C scaffold31849 Both SNP 0005.scaffold00021 68382 1 G A scaffold31849 ScafM SNP 0005.scaffold00021 68393 1 A C scaffold31849 ScafM SNP 0005.scaffold00021 68425 1 A T scaffold31849 ScafM SNP 0005.scaffold00021 68503 1 G C scaffold31849 ReadM SNP 0005.scaffold00021 68505 1 T A - ScafM SNP 0005.scaffold00021 68546 1 T C scaffold31849 ScafM SNP 0005.scaffold00021 68616 1 C T scaffold31849 ReadM SNP 0005.scaffold00021 69024 1 G A - ReadM SNP 0005.scaffold00021 70141 1 T G - ReadM SNP 0005.scaffold00021 70421 1 T A - ReadM SNP 0005.scaffold00021 71004 1 C T - ReadM SNP 0005.scaffold00021 72114 1 C G - ReadM SNP 0005.scaffold00021 72383 1 T G - ReadM SNP 0005.scaffold00021 72629 1 T C - ScafM SNP 0005.scaffold00021 72654 1 A T scaffold5888 ScafM INDEL 0005.scaffold00021 72685 1 C . scaffold5888 ScafM INDEL 0005.scaffold00021 72706 1 G . scaffold5888 ReadM SNP 0005.scaffold00021 72856 1 T C - ReadM SNP 0005.scaffold00021 73488 1 G C - ReadM SNP 0005.scaffold00021 73642 1 T C - ReadM SNP 0005.scaffold00021 75513 1 C A - ReadM SNP 0005.scaffold00021 75956 1 A G - ReadM SNP 0005.scaffold00021 76733 1 G T - ReadM SNP 0005.scaffold00021 77918 1 G T - ReadM SNP 0005.scaffold00021 78291 1 G T - ReadM SNP 0005.scaffold00021 79061 1 T C - Both SNP 0005.scaffold00021 79117 1 A T scaffold8156 ScafM INDEL 0005.scaffold00021 79185 1 C . scaffold8156 ScafM SNP 0005.scaffold00021 79253 1 G A scaffold8156 Both SNP 0005.scaffold00021 79489 1 T C scaffold8156 ScafM SNP 0005.scaffold00021 79635 1 G A scaffold8156 Both SNP 0005.scaffold00021 81052 1 T G scaffold8156 Both SNP 0005.scaffold00021 81108 1 C G scaffold8156 ReadM SNP 0005.scaffold00021 82083 1 T C - ReadM SNP 0005.scaffold00021 82137 1 A G - Both SNP 0005.scaffold00021 83000 1 G A scaffold8156 Both SNP 0005.scaffold00021 83065 1 T C scaffold8156 ScafM SNP 0005.scaffold00021 83212 1 G C scaffold8156 Both SNP 0005.scaffold00021 83510 1 G C scaffold8156 Both SNP 0005.scaffold00021 83519 2 TC GG scaffold8156 Both SNP 0005.scaffold00021 83634 1 A C scaffold8156 ScafM SNP 0005.scaffold00021 83713 1 C G scaffold8156 ScafM SNP 0005.scaffold00021 83854 2 GG AA scaffold8156 Both SNP 0005.scaffold00021 83907 1 T A scaffold8156 Both SNP 0005.scaffold00021 83912 1 C T scaffold8156 Both SNP 0005.scaffold00021 83963 1 C G scaffold8156 ReadM INDEL 0005.scaffold00021 85124 1 . T - Both SNP 0005.scaffold00021 85324 1 G A scaffold8156 ReadM SNP 0005.scaffold00021 85622 1 A T - ReadM SNP 0005.scaffold00021 85882 1 C T - ReadM SNP 0005.scaffold00021 85919 1 C A - ReadM SNP 0005.scaffold00021 86040 1 G T - ReadM SNP 0005.scaffold00021 86213 1 C T - Both SNP 0005.scaffold00021 86530 1 A G scaffold8156 Both SNP 0005.scaffold00021 86780 1 G A scaffold8156 Both SNP 0005.scaffold00021 86821 1 A T scaffold8156 Both SNP 0005.scaffold00021 86855 1 C T scaffold8156 Both SNP 0005.scaffold00021 87242 1 A G scaffold8156 Both SNP 0005.scaffold00021 87309 1 C T scaffold8156 Both SNP 0005.scaffold00021 87394 1 T A scaffold8156 Both SNP 0005.scaffold00021 87515 1 T A scaffold8156 ReadM SNP 0005.scaffold00021 87572 1 G A - Both SNP 0005.scaffold00021 87654 1 T C scaffold8156 Both SNP 0005.scaffold00021 87710 1 C T scaffold8156 Both SNP 0005.scaffold00021 87749 1 G C scaffold8156 Both SNP 0005.scaffold00021 88003 1 C T scaffold8156 Both SNP 0005.scaffold00021 88114 1 A C scaffold8156 Both SNP 0005.scaffold00021 88147 1 A G scaffold8156 Both SNP 0005.scaffold00021 88164 1 G A scaffold8156 Both SNP 0005.scaffold00021 89130 1 C T scaffold8156 Both SNP 0005.scaffold00021 89633 1 A T scaffold8156 Both SNP 0005.scaffold00021 89641 1 C T scaffold8156 Both SNP 0005.scaffold00021 90025 1 A G scaffold8156 Both SNP 0005.scaffold00021 90582 1 A G scaffold8156 Both SNP 0005.scaffold00021 90719 1 C G scaffold8156 ScafM SNP 0005.scaffold00021 90771 2 TT AA scaffold8156 Both SNP 0005.scaffold00021 90806 1 A T scaffold8156 ReadM SNP 0005.scaffold00021 91520 1 A G - ReadM SNP 0005.scaffold00021 91640 1 G A - ReadM SNP 0005.scaffold00021 92375 1 T C - ReadM SNP 0005.scaffold00021 92379 1 A G - ReadM SNP 0005.scaffold00021 92456 1 T A - ReadM SNP 0005.scaffold00021 92816 1 A C - ReadM SNP 0005.scaffold00021 92821 1 T C - ReadM SNP 0005.scaffold00021 92899 1 C T - ReadM SNP 0005.scaffold00021 92909 1 G A - Both SNP 0005.scaffold00021 93093 1 G A scaffold8156 Both SNP 0005.scaffold00021 93105 1 G A scaffold8156 Both SNP 0005.scaffold00021 93142 1 A G scaffold8156 ReadM SNP 0005.scaffold00021 93192 1 G A - ReadM SNP 0005.scaffold00021 93238 1 T G - ReadM SNP 0005.scaffold00021 93244 1 G A - ReadM SNP 0005.scaffold00021 93351 1 G T - ReadM SNP 0005.scaffold00021 93416 1 G A - ReadM SNP 0005.scaffold00021 93463 1 G T - ReadM SNP 0005.scaffold00021 93512 1 A T - Both SNP 0005.scaffold00021 93939 1 C T scaffold8156 Both SNP 0005.scaffold00021 93992 1 T A scaffold8156 ScafM INDEL 0005.scaffold00021 94304 7 TGATCCT ....... scaffold8156 Both SNP 0005.scaffold00021 94681 1 G A scaffold8156 ScafM INDEL 0005.scaffold00021 94855 7 ....... AGTACTA scaffold8156 ScafM SNP 0005.scaffold00021 94928 1 T G scaffold8156 ReadM SNP 0005.scaffold00021 95027 1 T A - ReadM SNP 0005.scaffold00021 95054 1 A T - ReadM SNP 0005.scaffold00021 95056 1 A T - ReadM SNP 0005.scaffold00021 95458 1 A G - ScafM SNP 0005.scaffold00021 95636 1 G A scaffold8156 ScafM INDEL 0005.scaffold00021 95678 3 ... CAA scaffold8156 ScafM SNP 0005.scaffold00021 95680 1 T A scaffold8156 ScafM INDEL 0005.scaffold00021 95690 3 ... AAA scaffold8156 ScafM SNP 0005.scaffold00021 96169 1 C A scaffold8156 ScafM SNP 0005.scaffold00021 96176 1 G A scaffold8156 ScafM SNP 0005.scaffold00021 96188 1 A T scaffold8156 ReadM SNP 0005.scaffold00021 96801 1 C A - Both SNP 0005.scaffold00021 97109 1 G T scaffold8156 Both SNP 0005.scaffold00021 97232 1 A T scaffold8156 Both SNP 0005.scaffold00021 97742 1 T C scaffold8156 Both SNP 0005.scaffold00021 97936 1 T G scaffold8156 ScafM SNP 0005.scaffold00021 97978 2 CC AT scaffold8156 Both SNP 0005.scaffold00021 98340 1 G A scaffold8156 Both SNP 0005.scaffold00021 98515 1 C T scaffold8156 ReadM SNP 0005.scaffold00021 98881 1 A G - Both SNP 0005.scaffold00021 98926 1 A G scaffold8156 Both SNP 0005.scaffold00021 99845 1 G A scaffold8156 ScafM SNP 0005.scaffold00021 99858 1 T C scaffold8156 Both SNP 0005.scaffold00021 100047 1 G C scaffold8156 ScafM INDEL 0005.scaffold00021 100378 3 ... TAA scaffold8156 ScafM SNP 0005.scaffold00021 100438 1 T G scaffold8156 Both SNP 0005.scaffold00021 100542 1 A C scaffold8156 Both SNP 0005.scaffold00021 100877 1 T G scaffold8156 Both SNP 0005.scaffold00021 101385 1 A G scaffold8156 ScafM INDEL 0005.scaffold00021 101421 14 .............. TGCTGAAAATTTTT scaffold8156 ScafM INDEL 0005.scaffold00021 101891 3 TGC ... scaffold8156 ScafM INDEL 0005.scaffold00021 101896 2 CA .. scaffold8156 Both INDEL 0005.scaffold00021 102049 1 . C scaffold8156 Both SNP 0005.scaffold00021 102118 1 A G scaffold8156 Both SNP 0005.scaffold00021 102149 1 T A scaffold8156 Both SNP 0005.scaffold00021 102211 1 C G scaffold8156 Both SNP 0005.scaffold00021 102389 1 A T scaffold8156 Both SNP 0005.scaffold00021 102405 1 T C scaffold8156 ReadM SNP 0005.scaffold00021 102836 1 C A - ReadM SNP 0005.scaffold00021 103106 1 G T - ReadM SNP 0005.scaffold00021 103720 1 G A - ReadM SNP 0005.scaffold00021 103798 1 G A - Both SNP 0005.scaffold00021 103969 1 C T scaffold8156 Both SNP 0005.scaffold00021 103982 1 A T scaffold8156 ReadM SNP 0005.scaffold00021 104347 1 C G - ReadM SNP 0005.scaffold00021 104427 1 G A - ReadM SNP 0005.scaffold00021 104484 1 C T - ReadM INDEL 0005.scaffold00021 104628 2 TC .. - ReadM SNP 0005.scaffold00021 105107 1 C G - ReadM SNP 0005.scaffold00021 105129 1 A G - ReadM SNP 0005.scaffold00021 105145 1 T C - ReadM SNP 0005.scaffold00021 105307 1 G A - ReadM SNP 0005.scaffold00021 105559 1 A G - Both SNP 0005.scaffold00021 105658 1 A G scaffold12527 ReadM SNP 0005.scaffold00021 106185 1 T G - ReadM SNP 0005.scaffold00021 106390 1 A G - ReadM SNP 0005.scaffold00021 106522 1 T C - ReadM SNP 0005.scaffold00021 106547 1 A G - ReadM SNP 0005.scaffold00021 106891 1 T C - ReadM SNP 0005.scaffold00021 106984 1 T G - ReadM SNP 0005.scaffold00021 107172 1 C T - ReadM SNP 0005.scaffold00021 107252 1 G C - Both SNP 0005.scaffold00021 107905 1 C T scaffold12527 ReadM SNP 0005.scaffold00021 108209 1 T C - ReadM SNP 0005.scaffold00021 108406 1 A C - ReadM SNP 0005.scaffold00021 108473 1 C T - Both SNP 0005.scaffold00021 108876 1 T C scaffold12527 Both SNP 0005.scaffold00021 109249 1 T C scaffold12527 Both SNP 0005.scaffold00021 109978 1 A G scaffold12527 ScafM INDEL 0005.scaffold00021 110359 6 ...... AAAAAA scaffold12527 Both SNP 0005.scaffold00021 110489 1 A G scaffold12527 ScafM INDEL 0005.scaffold00021 110875 22 GGGCTGTCAGTTATTATGACTC ...................... scaffold12527 Both SNP 0005.scaffold00021 111126 1 G C scaffold12527 Both SNP 0005.scaffold00021 111353 1 C A scaffold12527 Both SNP 0005.scaffold00021 111689 1 T G scaffold12527 Both SNP 0005.scaffold00021 112288 1 T A scaffold12527 Both SNP 0005.scaffold00021 112664 1 T C scaffold12527 Both SNP 0005.scaffold00021 112699 1 G C scaffold12527 Both INDEL 0005.scaffold00021 112980 1 . A scaffold12527 ScafM SNP 0005.scaffold00021 113052 1 C A scaffold12527 ScafM SNP 0005.scaffold00021 113054 1 A G scaffold12527 ScafM INDEL 0005.scaffold00021 113353 19 ................... AGATGGACAAAAAAGCAAA scaffold12527 Both SNP 0005.scaffold00021 113409 1 T A scaffold12527 Both SNP 0005.scaffold00021 113566 1 A G scaffold12527 Both INDEL 0005.scaffold00021 113715 1 A . scaffold12527 Both INDEL 0005.scaffold00021 114729 1 T . scaffold12527 ScafM SNP 0005.scaffold00021 114731 1 T G scaffold12527 Both SNP 0005.scaffold00021 114889 1 C T scaffold12527 ScafM SNP 0005.scaffold00021 116795 1 C T scaffold12527 Both SNP 0005.scaffold00021 116917 1 T G scaffold12527 ReadM INDEL 0005.scaffold00021 118002 1 . A - ReadM SNP 0005.scaffold00021 118054 1 A T - ReadM SNP 0005.scaffold00021 118381 1 T C - ReadM SNP 0005.scaffold00021 118494 1 T C - ReadM SNP 0005.scaffold00021 118574 1 A G - ReadM SNP 0005.scaffold00021 118592 1 T C - ReadM SNP 0005.scaffold00021 118696 1 A G - ReadM SNP 0005.scaffold00021 118765 1 T C - ReadM SNP 0005.scaffold00021 119267 1 A C - Both SNP 0005.scaffold00021 120204 1 A G scaffold12527 Both SNP 0005.scaffold00021 120229 1 T C scaffold12527 Both SNP 0005.scaffold00021 120770 1 T C scaffold12527 Both SNP 0005.scaffold00021 120786 1 A T scaffold12527 ScafM INDEL 0005.scaffold00021 121402 1 A . scaffold12527 ScafM INDEL 0005.scaffold00021 121602 2 .. GT scaffold12527 ScafM INDEL 0005.scaffold00021 121629 50 TTCACCAAAAAAAAAAAGTTCACCAAAAAAAAAAAAAAGAGAGAGTGGAG .................................................. scaffold12527 ScafM INDEL 0005.scaffold00021 121940 2 .. TA scaffold12527 ScafM INDEL 0005.scaffold00021 121942 2 .A GG scaffold12527 ScafM INDEL 0005.scaffold00021 121950 3 ..G ACC scaffold12527 ScafM SNP 0005.scaffold00021 130855 1 C G scaffold5352 ScafM SNP 0005.scaffold00021 130869 1 T C scaffold5352 ScafM SNP 0005.scaffold00021 130889 1 G T scaffold5352 ScafM SNP 0005.scaffold00021 130925 1 T A scaffold5352 ScafM SNP 0005.scaffold00021 130985 1 C A scaffold5352 ScafM INDEL 0005.scaffold00021 130997 19 ................... CGCCACGACCAATCTCTGG scaffold5352 ScafM SNP 0005.scaffold00021 131014 1 T C scaffold5352 ScafM SNP 0005.scaffold00021 131028 2 AT GC scaffold5352 ScafM SNP 0005.scaffold00021 131033 1 A C scaffold5352 ScafM SNP 0005.scaffold00021 131039 1 C G scaffold5352 ScafM SNP 0005.scaffold00021 131049 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131089 1 A G scaffold5352 ScafM SNP 0005.scaffold00021 131110 2 AT GG scaffold5352 ScafM SNP 0005.scaffold00021 131116 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131120 1 A G scaffold5352 ScafM SNP 0005.scaffold00021 131126 1 A G scaffold5352 ScafM SNP 0005.scaffold00021 131135 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131142 1 T A scaffold5352 ScafM INDEL 0005.scaffold00021 131149 4 GTGG .... scaffold5352 ScafM INDEL 0005.scaffold00021 131155 14 GGTGGGTTTTTGGA .............. scaffold5352 ScafM SNP 0005.scaffold00021 131184 1 C T scaffold5352 ScafM INDEL 0005.scaffold00021 131190 1 . G scaffold5352 ScafM INDEL 0005.scaffold00021 131197 1 . G scaffold5352 ScafM SNP 0005.scaffold00021 131199 1 A G scaffold5352 ScafM INDEL 0005.scaffold00021 131208 2 GA .T scaffold5352 ScafM SNP 0005.scaffold00021 131227 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131237 1 T G scaffold5352 ScafM INDEL 0005.scaffold00021 131250 2 AT .. scaffold5352 ScafM SNP 0005.scaffold00021 131267 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131277 1 C T scaffold5352 ScafM SNP 0005.scaffold00021 131283 1 T C scaffold5352 ScafM SNP 0005.scaffold00021 131290 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131298 1 A G scaffold5352 ScafM INDEL 0005.scaffold00021 131305 1 A . scaffold5352 ScafM SNP 0005.scaffold00021 131307 1 T A scaffold5352 ScafM SNP 0005.scaffold00021 131311 1 A G scaffold5352 ScafM SNP 0005.scaffold00021 131313 2 AA GC scaffold5352 ScafM SNP 0005.scaffold00021 131316 1 C T scaffold5352 ScafM SNP 0005.scaffold00021 131318 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131331 1 T G scaffold5352 ScafM SNP 0005.scaffold00021 131347 1 G C scaffold5352 ScafM SNP 0005.scaffold00021 131356 1 C T scaffold5352 ScafM SNP 0005.scaffold00021 131374 1 C T scaffold5352 ScafM INDEL 0005.scaffold00021 131381 2 GC .A scaffold5352 ScafM SNP 0005.scaffold00021 131402 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131405 1 T G scaffold5352 ScafM SNP 0005.scaffold00021 131439 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131450 2 GT TG scaffold5352 ScafM SNP 0005.scaffold00021 131462 1 T C scaffold5352 ScafM SNP 0005.scaffold00021 131464 3 GCA AGG scaffold5352 ScafM SNP 0005.scaffold00021 131473 1 G T scaffold5352 ScafM SNP 0005.scaffold00021 131482 1 T G scaffold5352 ScafM SNP 0005.scaffold00021 131484 1 C G scaffold5352 ScafM SNP 0005.scaffold00021 131487 2 GC AA scaffold5352 ScafM INDEL 0005.scaffold00021 131504 3 TGT ..C scaffold5352 ScafM SNP 0005.scaffold00021 131513 1 A T scaffold5352 ScafM INDEL 0005.scaffold00021 131514 2 .. GG scaffold5352 ScafM SNP 0005.scaffold00021 131516 1 C T scaffold5352 ScafM SNP 0005.scaffold00021 131518 1 G T scaffold5352 ScafM SNP 0005.scaffold00021 131520 2 GA TT scaffold5352 ScafM SNP 0005.scaffold00021 131537 1 A G scaffold5352 ScafM SNP 0005.scaffold00021 131539 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131562 1 T A scaffold5352 ScafM SNP 0005.scaffold00021 131589 1 G A scaffold5352 ScafM SNP 0005.scaffold00021 131603 1 T G scaffold5352 ScafM INDEL 0005.scaffold00021 159333 8 ........ CTCTGAAC scaffold7497 ScafM SNP 0005.scaffold00021 159356 1 G A scaffold7497 ScafM SNP 0005.scaffold00021 159385 2 AT CC scaffold7497 ScafM SNP 0005.scaffold00021 159394 1 T C scaffold7497 ScafM SNP 0005.scaffold00021 160490 1 G A scaffold883 ScafM SNP 0005.scaffold00021 160499 1 C G scaffold883 ScafM INDEL 0005.scaffold00021 165399 1 . A scaffold1472 ScafM INDEL 0005.scaffold00021 165402 2 .. CA scaffold1472 ScafM SNP 0005.scaffold00021 165407 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165413 1 A T scaffold1472 ScafM SNP 0005.scaffold00021 165506 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165512 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165515 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165517 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165556 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165579 1 C T scaffold1472 ScafM SNP 0005.scaffold00021 165581 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165597 1 G A scaffold1472 ScafM SNP 0005.scaffold00021 165615 1 T A scaffold1472 ScafM SNP 0005.scaffold00021 165633 1 C T scaffold1472 ScafM SNP 0005.scaffold00021 165640 1 C G scaffold1472 ScafM SNP 0005.scaffold00021 165660 1 C G scaffold1472 ScafM SNP 0005.scaffold00021 165689 2 TA CG scaffold1472 ScafM SNP 0005.scaffold00021 165697 2 GA CG scaffold1472 ScafM INDEL 0005.scaffold00021 165715 1 . C scaffold1472 ScafM SNP 0005.scaffold00021 165746 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165753 1 C G scaffold1472 ScafM SNP 0005.scaffold00021 165758 1 C T scaffold1472 ScafM INDEL 0005.scaffold00021 165795 6 ...... CTTTCT scaffold1472 ScafM SNP 0005.scaffold00021 165819 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165835 1 C G scaffold1472 ScafM SNP 0005.scaffold00021 165837 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165848 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165853 1 G T scaffold1472 ScafM SNP 0005.scaffold00021 165856 1 A T scaffold1472 ScafM SNP 0005.scaffold00021 165866 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165868 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165871 1 T C scaffold1472 ScafM SNP 0005.scaffold00021 165881 1 G T scaffold1472 ScafM SNP 0005.scaffold00021 165900 1 A G scaffold1472 ScafM SNP 0005.scaffold00021 165904 1 C T scaffold1472 ScafM INDEL 0005.scaffold00021 165906 1 . T scaffold1472 ScafM SNP 0005.scaffold00021 165946 1 C T scaffold1472 ScafM SNP 0005.scaffold00021 165958 1 A C scaffold1472 ScafM SNP 0005.scaffold00021 170968 1 A T scaffold9964 ReadM SNP 0005.scaffold00021 206771 1 G C - ReadM SNP 0005.scaffold00021 206796 1 A G - ScafM SNP 0005.scaffold00021 211358 1 C T scaffold1852 ScafM SNP 0005.scaffold00021 211374 1 C G scaffold1852 ScafM SNP 0005.scaffold00021 211548 1 G T scaffold4553 ScafM SNP 0005.scaffold00021 211560 1 C A scaffold4553 ScafM INDEL 0005.scaffold00021 211562 1 C . scaffold4553 ScafM INDEL 0005.scaffold00021 211564 4 CCGA .GTT scaffold4553 ScafM SNP 0005.scaffold00021 211569 1 C T scaffold4553 ScafM INDEL 0005.scaffold00021 211570 1 . T scaffold4553 ScafM SNP 0005.scaffold00021 211577 1 G T scaffold4553 ScafM SNP 0005.scaffold00021 211586 1 G T scaffold4553 ScafM INDEL 0005.scaffold00021 211611 1 . A scaffold4553 ScafM SNP 0005.scaffold00021 211643 1 C A scaffold4553 ScafM INDEL 0005.scaffold00021 211682 1 T . scaffold4553 ScafM SNP 0005.scaffold00021 211684 3 TGA CAT scaffold4553 ScafM SNP 0005.scaffold00021 211695 1 G A scaffold4553 ScafM SNP 0005.scaffold00021 211714 1 C A scaffold4553 ScafM SNP 0005.scaffold00021 211722 1 C T scaffold4553 ScafM SNP 0005.scaffold00021 211724 1 T C scaffold4553 ScafM SNP 0005.scaffold00021 211737 1 A G scaffold4553 ScafM SNP 0005.scaffold00021 211742 2 TG CA scaffold4553 ReadM SNP 0005.scaffold00021 220423 1 A C - ReadM SNP 0005.scaffold00021 220485 1 G T - ReadM SNP 0005.scaffold00021 220529 1 T C - ReadM SNP 0005.scaffold00021 220531 1 G C - ReadM SNP 0005.scaffold00021 220586 1 G A - ReadM SNP 0005.scaffold00021 220630 1 A T - ReadM SNP 0005.scaffold00021 220652 1 A T - ReadM SNP 0005.scaffold00021 220671 1 A T - ReadM SNP 0005.scaffold00021 220819 1 G A - ReadM SNP 0005.scaffold00021 220838 1 C G - ReadM SNP 0005.scaffold00021 220853 1 T C - ReadM SNP 0005.scaffold00021 220903 1 A G - ReadM SNP 0005.scaffold00021 220957 1 G T - ReadM SNP 0005.scaffold00021 221006 1 G A - ReadM SNP 0005.scaffold00021 221018 1 A G - ReadM SNP 0005.scaffold00021 221238 1 A G - ReadM SNP 0005.scaffold00021 221300 1 G T - ReadM SNP 0005.scaffold00021 221383 1 T C - ReadM SNP 0005.scaffold00021 221407 1 C T - ReadM SNP 0005.scaffold00021 221472 1 A C - ReadM SNP 0005.scaffold00021 221547 1 G A - ReadM SNP 0005.scaffold00021 221690 1 A G - ReadM SNP 0005.scaffold00021 221699 1 G T - ReadM SNP 0005.scaffold00021 221753 1 C A - ReadM SNP 0005.scaffold00021 221834 1 T A - ReadM SNP 0005.scaffold00021 221838 1 T C - ReadM SNP 0005.scaffold00021 221899 1 G T - ReadM SNP 0005.scaffold00021 222196 1 A C - ScafM SNP 0005.scaffold00021 222380 1 G A scaffold10658 ReadM SNP 0005.scaffold00021 222482 1 T C - ReadM SNP 0005.scaffold00021 222488 1 T G - ScafM SNP 0005.scaffold00021 222634 1 T A scaffold10658 ScafM INDEL 0005.scaffold00021 222660 2 GT .. scaffold10658 ScafM SNP 0005.scaffold00021 222688 1 C A scaffold10658 ScafM SNP 0005.scaffold00021 222707 1 C A scaffold10658 ReadM SNP 0005.scaffold00021 222989 1 G A - Both SNP 0005.scaffold00021 223053 1 G A scaffold10658 Both SNP 0005.scaffold00021 223135 1 G A scaffold10658 Both SNP 0005.scaffold00021 223504 1 G A scaffold10658 Both SNP 0005.scaffold00021 223551 1 C A scaffold10658 Both SNP 0005.scaffold00021 224005 1 A T scaffold10658 Both SNP 0005.scaffold00021 224043 1 G A scaffold10658 ReadM SNP 0005.scaffold00021 224252 1 G T - ReadM SNP 0005.scaffold00021 224360 1 A T - Both INDEL 0005.scaffold00021 224672 1 . A scaffold10658 Both SNP 0005.scaffold00021 224684 1 C A scaffold10658 Both SNP 0005.scaffold00021 224882 1 A T scaffold10658 Both SNP 0005.scaffold00021 225083 1 A G scaffold10658 Both SNP 0005.scaffold00021 225167 1 G C scaffold10658 ScafM SNP 0005.scaffold00021 225233 1 C G scaffold10658 ScafM SNP 0005.scaffold00021 225483 1 T C scaffold10658 ScafM SNP 0005.scaffold00021 225512 1 A T scaffold10658 ScafM SNP 0005.scaffold00021 225531 1 A T scaffold10658 ScafM SNP 0005.scaffold00021 225548 2 AA CT scaffold10658 ScafM SNP 0005.scaffold00021 225572 1 A G scaffold10658 ScafM SNP 0005.scaffold00021 228549 1 T C scaffold743 ScafM INDEL 0005.scaffold00021 228568 1 . T scaffold743 ScafM INDEL 0005.scaffold00021 228595 1 . C scaffold743 ScafM SNP 0005.scaffold00021 228599 2 AT GG scaffold743 ScafM SNP 0005.scaffold00021 228615 1 C T scaffold743 ScafM SNP 0005.scaffold00021 228640 1 C G scaffold743 ScafM SNP 0005.scaffold00021 228661 1 G A scaffold743 ScafM SNP 0005.scaffold00021 228808 2 TA AC scaffold10658 ScafM SNP 0005.scaffold00021 228814 1 A G scaffold10658 ScafM SNP 0005.scaffold00021 228817 1 T C scaffold10658 ScafM INDEL 0005.scaffold00021 228829 1 A . scaffold10658 ScafM SNP 0005.scaffold00021 228864 1 G A scaffold10658 ScafM SNP 0005.scaffold00021 228891 1 C T scaffold10658 ScafM SNP 0005.scaffold00021 228897 1 G C scaffold10658 ScafM SNP 0005.scaffold00021 228986 1 A G scaffold10658 ScafM INDEL 0005.scaffold00021 229566 1 . T scaffold10658 Both INDEL 0005.scaffold00021 229943 2 .. TT scaffold10658 ReadM SNP 0005.scaffold00021 230187 1 C T - ReadM SNP 0005.scaffold00021 230215 1 T C - ReadM SNP 0005.scaffold00021 230418 1 A G - ScafM SNP 0005.scaffold00021 231002 1 G A scaffold10658 ScafM SNP 0005.scaffold00021 231054 1 A G scaffold10658 ScafM SNP 0005.scaffold00021 231182 1 G C scaffold10658 ScafM SNP 0005.scaffold00021 231194 1 T A scaffold10658 ScafM SNP 0005.scaffold00021 231476 1 T C scaffold10658 ScafM SNP 0005.scaffold00021 231478 1 C A scaffold10658 Both SNP 0005.scaffold00021 231769 1 A C scaffold10658 ScafM SNP 0005.scaffold00021 231855 1 C A scaffold10658 Both SNP 0005.scaffold00021 231927 1 C A scaffold10658 ReadM SNP 0005.scaffold00021 232155 1 C G - ReadM SNP 0005.scaffold00021 232356 1 T A - ReadM SNP 0005.scaffold00021 232391 1 G A - Both SNP 0005.scaffold00021 232501 1 T A scaffold10658 ScafM INDEL 0005.scaffold00021 233028 8 AATTATTT ........ scaffold10658 ScafM INDEL 0005.scaffold00021 233147 2 .. AT scaffold10658 ScafM SNP 0005.scaffold00021 233152 1 T A scaffold10658 ReadM SNP 0005.scaffold00021 233447 1 T C - ReadM INDEL 0005.scaffold00021 233482 1 . T - ReadM SNP 0005.scaffold00021 233668 1 G A - ReadM SNP 0005.scaffold00021 233694 1 T C - ScafM SNP 0005.scaffold00021 234382 1 G A scaffold10658 ScafM SNP 0005.scaffold00021 234417 1 C T scaffold10658 ScafM SNP 0005.scaffold00021 234487 1 T C scaffold10658 Both SNP 0005.scaffold00021 234919 1 T A scaffold10658 ScafM INDEL 0005.scaffold00021 235114 66 GTTATATAGTTTGAATTTAATTTCATTGAATTGGATAGTGCTGTAGGAAAGCTATAATCTTGTTTA .................................................................. scaffold10658 Both SNP 0005.scaffold00021 235522 1 T A scaffold10658 Both SNP 0005.scaffold00021 235835 1 A C scaffold10658 ScafM SNP 0005.scaffold00021 235875 1 A G scaffold10658 Both SNP 0005.scaffold00021 235906 1 A T scaffold10658 Both SNP 0005.scaffold00021 235939 1 G T scaffold10658 ReadM SNP 0005.scaffold00021 236446 1 C G - ReadM SNP 0005.scaffold00021 236752 1 C T - ReadM INDEL 0005.scaffold00021 236796 1 A . - ScafM SNP 0005.scaffold00021 237560 1 T C scaffold26977 Both SNP 0005.scaffold00021 237849 1 G C scaffold26977 ScafM SNP 0005.scaffold00021 237972 1 C T scaffold26977 ScafM INDEL 0005.scaffold00021 237994 3 ATC ... scaffold26977 Both SNP 0005.scaffold00021 238368 1 G A scaffold26977 Both SNP 0005.scaffold00021 238375 1 C T scaffold26977 Both INDEL 0005.scaffold00021 238657 2 GT .. scaffold26977 Both SNP 0005.scaffold00021 239267 1 A G scaffold19827 ScafM INDEL 0005.scaffold00021 239489 33 GGCAACGCCAAGATAAGGCGCACAATGAGAGCT ................................. scaffold19827 Both SNP 0005.scaffold00021 239553 1 T A scaffold19827 Both SNP 0005.scaffold00021 239648 1 T C scaffold19827 Both SNP 0005.scaffold00021 239720 1 A G scaffold19827 ScafM SNP 0005.scaffold00021 239757 1 T G scaffold19827 Both SNP 0005.scaffold00021 239974 1 C T scaffold19827 Both SNP 0005.scaffold00021 240080 1 C A scaffold19827 ReadM SNP 0005.scaffold00021 240447 1 T G - Both SNP 0005.scaffold00021 240554 1 A G scaffold19827 ReadM INDEL 0005.scaffold00021 241200 1 A . - ReadM SNP 0005.scaffold00021 242443 1 T G - ScafM SNP 0005.scaffold00021 243108 2 TC GT scaffold19827 ScafM SNP 0005.scaffold00021 243449 1 G A scaffold19827 ScafM SNP 0005.scaffold00021 243788 1 G A scaffold19827 ScafM SNP 0005.scaffold00021 243790 1 C T scaffold19827 ReadM INDEL 0005.scaffold00021 244146 1 T . - ScafM INDEL 0005.scaffold00021 244153 3 TTT ... scaffold19827 Both SNP 0005.scaffold00021 244202 1 C T scaffold19827 Both SNP 0005.scaffold00021 244218 1 G A scaffold19827 Both SNP 0005.scaffold00021 244527 1 T C scaffold19827 ReadM SNP 0005.scaffold00021 245706 1 T C - ReadM SNP 0005.scaffold00021 245741 1 A G - ReadM INDEL 0005.scaffold00021 245751 1 . C - ReadM SNP 0005.scaffold00021 249346 1 G A - ReadM SNP 0005.scaffold00021 249738 1 G C - ReadM SNP 0005.scaffold00021 249905 1 T C - ReadM SNP 0005.scaffold00021 254192 1 C T - ReadM SNP 0005.scaffold00021 254278 1 C T - ReadM SNP 0005.scaffold00021 254446 1 T C - ReadM SNP 0005.scaffold00021 257293 1 A C - ReadM SNP 0005.scaffold00021 257350 1 G A - ReadM SNP 0005.scaffold00021 257376 1 T C - ReadM SNP 0005.scaffold00021 257497 1 G C - ReadM SNP 0005.scaffold00021 257507 1 G A - ReadM SNP 0005.scaffold00021 258309 1 A G - ReadM SNP 0005.scaffold00021 258557 1 C A - ReadM SNP 0005.scaffold00021 258713 1 A C - ReadM SNP 0005.scaffold00021 259123 1 A C - ReadM SNP 0005.scaffold00021 262810 1 C T - ReadM SNP 0005.scaffold00021 263444 1 C T - ReadM SNP 0005.scaffold00021 263469 1 T C - ReadM SNP 0005.scaffold00021 263506 1 A T - ReadM SNP 0005.scaffold00021 263613 1 G A - ReadM SNP 0005.scaffold00021 263813 1 T C - ReadM SNP 0005.scaffold00021 264036 1 A G - ReadM SNP 0005.scaffold00021 264693 1 T A - ReadM SNP 0005.scaffold00021 264729 1 C A - ReadM SNP 0005.scaffold00021 264757 1 C A - ReadM SNP 0005.scaffold00021 265237 1 C T - ReadM INDEL 0005.scaffold00021 265263 1 T . - ReadM SNP 0005.scaffold00021 265321 1 C T - ReadM SNP 0005.scaffold00021 265461 1 A G - ReadM SNP 0005.scaffold00021 265500 1 C A - ReadM SNP 0005.scaffold00021 265991 1 G A - ReadM SNP 0005.scaffold00021 266014 1 G T - ReadM SNP 0005.scaffold00021 266153 1 G A - ReadM SNP 0005.scaffold00021 266258 1 G C - ReadM SNP 0005.scaffold00021 266457 1 T C - ReadM SNP 0005.scaffold00021 266537 1 G A - Both SNP 0005.scaffold00021 266949 1 C A scaffold2907 Both SNP 0005.scaffold00021 267117 1 C T scaffold2907 ReadM SNP 0005.scaffold00021 267460 1 T C - ReadM INDEL 0005.scaffold00021 267511 1 . G - ReadM SNP 0005.scaffold00021 267521 1 T G - ReadM SNP 0005.scaffold00021 268069 1 A G - ReadM SNP 0005.scaffold00021 268198 1 T C - ReadM SNP 0005.scaffold00021 268584 1 T C - ReadM SNP 0005.scaffold00021 268687 1 C T - ReadM SNP 0005.scaffold00021 268998 1 T A - ReadM SNP 0005.scaffold00021 269455 1 T A - ReadM SNP 0005.scaffold00021 269556 1 T C - ReadM SNP 0005.scaffold00021 269591 1 G A - ReadM SNP 0005.scaffold00021 269621 1 G T - ReadM SNP 0005.scaffold00021 269667 1 T C - Both SNP 0005.scaffold00021 269739 1 T C scaffold2907 ReadM SNP 0005.scaffold00021 269861 1 T A - ReadM SNP 0005.scaffold00021 270023 1 A G - ReadM SNP 0005.scaffold00021 270275 1 C G - ReadM SNP 0005.scaffold00021 270586 1 C T - ReadM SNP 0005.scaffold00021 270798 1 G A - ReadM SNP 0005.scaffold00021 270927 1 T A - ReadM SNP 0005.scaffold00021 271124 1 A G - ReadM SNP 0005.scaffold00021 271679 1 C T - ReadM SNP 0005.scaffold00021 272247 1 G A - ReadM SNP 0005.scaffold00021 272379 1 G A - ReadM INDEL 0005.scaffold00021 272900 1 T . - ReadM SNP 0005.scaffold00021 273131 1 G A - ReadM SNP 0005.scaffold00021 273521 1 T C - ReadM SNP 0006.scaffold00022 491 1 G A - ReadM SNP 0006.scaffold00022 566 1 G C - ReadM SNP 0006.scaffold00022 578 1 T C - ReadM SNP 0006.scaffold00022 601 1 C T - ReadM SNP 0006.scaffold00022 618 1 A T - ReadM SNP 0006.scaffold00022 678 1 C T - ReadM SNP 0006.scaffold00022 680 1 C A - ReadM SNP 0006.scaffold00022 741 1 C T - ScafM SNP 0006.scaffold00022 3600 1 C T scaffold2046 ScafM SNP 0006.scaffold00022 3666 2 TA GC scaffold2046 ScafM SNP 0006.scaffold00022 3678 1 A T scaffold2046 ScafM SNP 0006.scaffold00022 3683 2 GG AA scaffold2046 ScafM SNP 0006.scaffold00022 3700 1 A C scaffold2046 ScafM SNP 0006.scaffold00022 3703 1 A C scaffold2046 ScafM SNP 0006.scaffold00022 4548 1 T C scaffold12218 ScafM SNP 0006.scaffold00022 4550 1 A T scaffold12218 ScafM INDEL 0006.scaffold00022 4570 2 .. TT scaffold12218 ScafM SNP 0006.scaffold00022 4582 1 C T scaffold12218 ScafM SNP 0006.scaffold00022 4684 1 A C scaffold12218 ScafM SNP 0006.scaffold00022 4723 1 C G scaffold12218 ScafM SNP 0006.scaffold00022 4737 1 T A scaffold12218 ScafM SNP 0006.scaffold00022 4764 1 G T scaffold11343 ScafM INDEL 0006.scaffold00022 4799 3 GGT ... scaffold11343 ScafM SNP 0006.scaffold00022 4803 1 T G scaffold11343 ScafM SNP 0006.scaffold00022 4865 1 C T scaffold11343 Both SNP 0006.scaffold00022 5299 1 T A scaffold11343 Both SNP 0006.scaffold00022 5304 1 T C scaffold11343 Both INDEL 0006.scaffold00022 5322 1 . A scaffold11343 Both SNP 0006.scaffold00022 5468 1 A T scaffold11343 Both SNP 0006.scaffold00022 5489 1 T A scaffold11343 Both SNP 0006.scaffold00022 5498 1 C T scaffold11343 Both INDEL 0006.scaffold00022 5516 1 A . scaffold11343 Both SNP 0006.scaffold00022 5664 1 T C scaffold11343 Both SNP 0006.scaffold00022 5708 1 T A scaffold11343 ScafM SNP 0006.scaffold00022 5873 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 5875 1 T A scaffold11343 ScafM INDEL 0006.scaffold00022 5917 2 .. TG scaffold11343 ScafM SNP 0006.scaffold00022 5970 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 5978 1 T C scaffold11343 Both SNP 0006.scaffold00022 6025 1 C T scaffold11343 Both SNP 0006.scaffold00022 6055 1 G C scaffold11343 Both SNP 0006.scaffold00022 6064 1 A G scaffold11343 ReadM SNP 0006.scaffold00022 6135 1 A G - ReadM SNP 0006.scaffold00022 6172 1 T C - ReadM SNP 0006.scaffold00022 6221 1 G C - ReadM SNP 0006.scaffold00022 6243 1 C G - ReadM SNP 0006.scaffold00022 6267 1 C T - ReadM INDEL 0006.scaffold00022 6418 1 . C - ReadM SNP 0006.scaffold00022 6447 1 A T - ReadM SNP 0006.scaffold00022 6464 1 T C - ReadM SNP 0006.scaffold00022 6488 1 C T - ReadM SNP 0006.scaffold00022 6492 1 A T - ReadM SNP 0006.scaffold00022 6525 1 C G - ReadM SNP 0006.scaffold00022 6659 1 G C - ReadM SNP 0006.scaffold00022 6670 1 A T - ReadM SNP 0006.scaffold00022 6700 1 A C - ReadM INDEL 0006.scaffold00022 6709 1 . 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T scaffold11343 Both SNP 0006.scaffold00022 8919 1 T C scaffold11343 Both SNP 0006.scaffold00022 8927 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 8980 1 T C scaffold11343 ScafM INDEL 0006.scaffold00022 8993 1 T . scaffold11343 ScafM SNP 0006.scaffold00022 9023 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 9028 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 9078 1 A T scaffold11343 Both SNP 0006.scaffold00022 9159 1 A G scaffold11343 Both SNP 0006.scaffold00022 9235 1 G A scaffold11343 Both SNP 0006.scaffold00022 9248 1 G C scaffold11343 Both SNP 0006.scaffold00022 9277 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 9292 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 9350 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 9354 1 T A scaffold11343 Both SNP 0006.scaffold00022 9395 1 A G scaffold11343 ScafM SNP 0006.scaffold00022 9413 1 G A scaffold11343 Both SNP 0006.scaffold00022 9451 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 9479 1 G T scaffold11343 Both SNP 0006.scaffold00022 9546 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 9585 2 AG GT scaffold11343 ScafM INDEL 0006.scaffold00022 9605 6 CCGGAC ...... scaffold11343 ScafM SNP 0006.scaffold00022 9631 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 9641 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 9647 1 T A scaffold11343 ScafM SNP 0006.scaffold00022 9675 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 9684 1 A G scaffold11343 ScafM SNP 0006.scaffold00022 9688 1 C A scaffold11343 ReadM SNP 0006.scaffold00022 9750 1 T C - ScafM SNP 0006.scaffold00022 10122 1 A C scaffold11343 ScafM INDEL 0006.scaffold00022 10138 1 . A scaffold11343 ScafM SNP 0006.scaffold00022 10142 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 10167 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 10182 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 10202 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 10226 1 T A scaffold11343 Both SNP 0006.scaffold00022 10242 1 A G scaffold11343 Both SNP 0006.scaffold00022 10267 1 T G scaffold11343 Both SNP 0006.scaffold00022 10276 1 T C scaffold11343 Both SNP 0006.scaffold00022 10394 1 G T scaffold11343 ScafM SNP 0006.scaffold00022 10437 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 10510 1 G C scaffold11343 ScafM SNP 0006.scaffold00022 10529 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 10588 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 10611 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 10802 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 11054 1 G C scaffold11343 ScafM SNP 0006.scaffold00022 11158 1 T A scaffold11343 ScafM SNP 0006.scaffold00022 11181 1 T G scaffold11343 ScafM INDEL 0006.scaffold00022 11224 1 . 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G - ReadM SNP 0006.scaffold00022 17401 1 C A - Both SNP 0006.scaffold00022 17733 1 A G scaffold11343 ReadM SNP 0006.scaffold00022 17783 1 A G - ReadM INDEL 0006.scaffold00022 17864 1 . A - Both SNP 0006.scaffold00022 17936 1 G A scaffold11343 Both SNP 0006.scaffold00022 17953 1 A G scaffold11343 ReadM INDEL 0006.scaffold00022 18146 1 A . - ReadM SNP 0006.scaffold00022 18292 1 T C - ReadM SNP 0006.scaffold00022 18831 1 G A - ReadM SNP 0006.scaffold00022 18896 1 G A - ReadM INDEL 0006.scaffold00022 18941 1 . G - ReadM SNP 0006.scaffold00022 19292 1 G A - ReadM SNP 0006.scaffold00022 19312 1 C T - Both SNP 0006.scaffold00022 19362 1 A G scaffold11343 Both SNP 0006.scaffold00022 19405 1 C G scaffold11343 Both SNP 0006.scaffold00022 19419 1 C T scaffold11343 Both SNP 0006.scaffold00022 19578 1 C A scaffold11343 Both SNP 0006.scaffold00022 19649 1 C G scaffold11343 Both SNP 0006.scaffold00022 19714 1 T A scaffold11343 ScafM SNP 0006.scaffold00022 19776 1 T A scaffold11343 Both SNP 0006.scaffold00022 19785 1 A T scaffold11343 ScafM INDEL 0006.scaffold00022 19854 2 .. AA scaffold11343 Both SNP 0006.scaffold00022 19935 1 G A scaffold11343 Both SNP 0006.scaffold00022 19979 1 A T scaffold11343 Both SNP 0006.scaffold00022 20110 1 A G scaffold11343 ScafM SNP 0006.scaffold00022 20353 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 20356 1 C T scaffold11343 ScafM INDEL 0006.scaffold00022 20365 2 .C TT scaffold11343 ScafM INDEL 0006.scaffold00022 20373 1 . A scaffold11343 ScafM SNP 0006.scaffold00022 20387 1 G T scaffold11343 ScafM SNP 0006.scaffold00022 20496 2 TC CT scaffold11343 ScafM INDEL 0006.scaffold00022 20632 3 ... TGT scaffold11343 ScafM SNP 0006.scaffold00022 20633 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 20675 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 20831 1 G T scaffold11343 ScafM INDEL 0006.scaffold00022 20836 2 GT .. scaffold11343 ScafM SNP 0006.scaffold00022 20845 1 A G scaffold11343 ScafM INDEL 0006.scaffold00022 20852 1 T . scaffold11343 ScafM SNP 0006.scaffold00022 20858 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 20874 1 C T scaffold11343 ScafM INDEL 0006.scaffold00022 20880 4 .... TATA scaffold11343 ScafM SNP 0006.scaffold00022 20882 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 20888 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 20915 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 20918 2 CG TA scaffold11343 ScafM SNP 0006.scaffold00022 20952 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 20959 1 C T scaffold11343 ScafM INDEL 0006.scaffold00022 21119 3 ... TTG scaffold11343 ScafM INDEL 0006.scaffold00022 21157 17 ................. AGTTTTAAATAATAGAT scaffold11343 ScafM SNP 0006.scaffold00022 21191 1 G A scaffold11343 ScafM INDEL 0006.scaffold00022 21196 8 ........ TTGAAAAC scaffold11343 ScafM SNP 0006.scaffold00022 21206 1 A C scaffold11343 ScafM SNP 0006.scaffold00022 21213 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 21216 1 G T scaffold11343 ScafM SNP 0006.scaffold00022 21232 1 A T scaffold11343 ScafM SNP 0006.scaffold00022 21249 1 G T scaffold11343 ScafM INDEL 0006.scaffold00022 21257 28 ............................ AACATGCTGTCCCCGTCAAAAAAAAAAA scaffold11343 Both SNP 0006.scaffold00022 21350 1 A G scaffold11343 ScafM INDEL 0006.scaffold00022 21436 8 ........ CACTAGTA scaffold11343 Both SNP 0006.scaffold00022 21475 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 21526 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 21555 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 21581 1 A C scaffold11343 ScafM SNP 0006.scaffold00022 21587 1 T G scaffold11343 ScafM SNP 0006.scaffold00022 21760 1 A G scaffold11343 ScafM SNP 0006.scaffold00022 21790 1 A C scaffold11343 ScafM SNP 0006.scaffold00022 21801 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 21820 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 21847 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 21860 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 21874 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 21879 1 T C scaffold11343 ScafM INDEL 0006.scaffold00022 21888 4 GTAC .... scaffold11343 ScafM SNP 0006.scaffold00022 21929 2 CT TC scaffold11343 ScafM SNP 0006.scaffold00022 21934 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 22118 1 C T scaffold11343 ScafM SNP 0006.scaffold00022 22139 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 22166 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 22178 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 22191 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 22233 1 C G scaffold11343 ScafM SNP 0006.scaffold00022 22251 1 C A scaffold11343 ScafM SNP 0006.scaffold00022 22264 1 T C scaffold11343 ScafM INDEL 0006.scaffold00022 22288 7 ACTTATA ....... scaffold11343 ScafM SNP 0006.scaffold00022 22305 1 T G scaffold11343 ScafM SNP 0006.scaffold00022 22322 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 22333 1 T A scaffold11343 ScafM SNP 0006.scaffold00022 22357 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 22377 1 T C scaffold11343 ScafM INDEL 0006.scaffold00022 22384 2 GT .C scaffold11343 ScafM SNP 0006.scaffold00022 22396 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 22399 1 G A scaffold11343 Both SNP 0006.scaffold00022 22749 1 G A scaffold11343 Both SNP 0006.scaffold00022 22838 1 A G scaffold11343 Both SNP 0006.scaffold00022 22948 1 A T scaffold11343 Both SNP 0006.scaffold00022 23096 1 T C scaffold11343 Both SNP 0006.scaffold00022 23173 1 A G scaffold11343 Both SNP 0006.scaffold00022 23247 1 T A scaffold11343 Both SNP 0006.scaffold00022 23429 1 A T scaffold11343 Both SNP 0006.scaffold00022 23763 1 A G scaffold11343 Both SNP 0006.scaffold00022 23864 1 A G scaffold11343 Both SNP 0006.scaffold00022 23961 1 G A scaffold11343 Both SNP 0006.scaffold00022 24070 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 24486 2 CT TG scaffold11343 ScafM INDEL 0006.scaffold00022 24498 8 ........ 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T scaffold11343 Both SNP 0006.scaffold00022 32042 1 C T scaffold11343 ReadM SNP 0006.scaffold00022 32274 1 C T - Both SNP 0006.scaffold00022 32985 1 C T scaffold11343 Both SNP 0006.scaffold00022 33235 1 G A scaffold11343 Both SNP 0006.scaffold00022 33247 1 A G scaffold11343 Both SNP 0006.scaffold00022 33671 1 A G scaffold11343 ScafM SNP 0006.scaffold00022 33914 1 G A scaffold11343 ScafM INDEL 0006.scaffold00022 34012 3 ... ACT scaffold11343 ScafM SNP 0006.scaffold00022 34065 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 37765 1 T G scaffold11343 Both SNP 0006.scaffold00022 37964 1 C T scaffold11343 Both SNP 0006.scaffold00022 38088 1 G T scaffold11343 Both SNP 0006.scaffold00022 38647 1 C T scaffold11343 Both SNP 0006.scaffold00022 38873 1 A G scaffold11343 Both SNP 0006.scaffold00022 39243 1 T C scaffold11343 ScafM SNP 0006.scaffold00022 39539 1 A T scaffold11343 Both SNP 0006.scaffold00022 39613 1 C A scaffold11343 Both SNP 0006.scaffold00022 39713 1 T G scaffold11343 Both SNP 0006.scaffold00022 40029 1 A T scaffold11343 ScafM INDEL 0006.scaffold00022 40053 6 ...... TAGATT scaffold11343 Both SNP 0006.scaffold00022 40211 1 G A scaffold11343 Both SNP 0006.scaffold00022 40367 1 C G scaffold11343 Both SNP 0006.scaffold00022 40385 1 C G scaffold11343 Both SNP 0006.scaffold00022 40581 1 G A scaffold11343 Both SNP 0006.scaffold00022 40590 1 T G scaffold11343 Both SNP 0006.scaffold00022 40614 1 C A scaffold11343 Both INDEL 0006.scaffold00022 40659 1 T . scaffold11343 Both SNP 0006.scaffold00022 40852 1 C A scaffold11343 Both SNP 0006.scaffold00022 40860 1 C T scaffold11343 ReadM SNP 0006.scaffold00022 40894 1 A G - ReadM INDEL 0006.scaffold00022 41127 1 . G - Both SNP 0006.scaffold00022 41180 1 C T scaffold11343 Both SNP 0006.scaffold00022 41185 1 C T scaffold11343 Both SNP 0006.scaffold00022 41368 1 G A scaffold11343 Both SNP 0006.scaffold00022 41481 1 T A scaffold11343 ScafM INDEL 0006.scaffold00022 41581 8 ........ CTTAAGCA scaffold11343 ScafM SNP 0006.scaffold00022 41629 1 G A scaffold11343 ScafM SNP 0006.scaffold00022 41655 1 T G scaffold11343 ScafM SNP 0006.scaffold00022 41659 1 T G scaffold11343 ScafM INDEL 0006.scaffold00022 41666 3 ... AAT scaffold11343 ScafM INDEL 0006.scaffold00022 41669 1 . 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T scaffold11343 Both SNP 0006.scaffold00022 47908 1 C G scaffold11343 Both SNP 0006.scaffold00022 47918 1 G A scaffold11343 Both SNP 0006.scaffold00022 47949 1 C T scaffold11343 Both SNP 0006.scaffold00022 48072 1 G T scaffold11343 Both SNP 0006.scaffold00022 48125 1 G A scaffold11343 ScafM INDEL 0006.scaffold00022 48157 1 . T scaffold11343 ReadM INDEL 0006.scaffold00022 48172 1 . 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A scaffold10235 Both SNP 0007.scaffold00024 18634 1 C T scaffold10235 ReadM SNP 0007.scaffold00024 19481 1 T C - ScafM INDEL 0007.scaffold00024 19852 1 T . scaffold10235 ScafM SNP 0007.scaffold00024 19862 1 T G scaffold10235 ReadM SNP 0007.scaffold00024 20198 1 T A - ReadM SNP 0007.scaffold00024 20357 1 C T - ReadM SNP 0007.scaffold00024 20640 1 C T - ReadM SNP 0007.scaffold00024 20645 1 T C - ReadM SNP 0007.scaffold00024 20737 1 A G - ReadM SNP 0007.scaffold00024 20789 1 C A - ReadM SNP 0007.scaffold00024 21446 1 G T - ReadM SNP 0007.scaffold00024 21580 1 G T - ReadM SNP 0007.scaffold00024 21621 1 A G - ReadM SNP 0007.scaffold00024 22239 1 G C - ReadM SNP 0007.scaffold00024 22249 1 T C - ReadM SNP 0007.scaffold00024 22252 1 C G - Both INDEL 0007.scaffold00024 22632 1 A . scaffold10235 Both SNP 0007.scaffold00024 22899 1 G A scaffold10235 ReadM SNP 0007.scaffold00024 23455 1 A G - ReadM SNP 0007.scaffold00024 23612 1 T A - Both SNP 0007.scaffold00024 23822 1 T A scaffold10235 Both SNP 0007.scaffold00024 23857 1 A G scaffold10235 Both SNP 0007.scaffold00024 24079 1 C T scaffold10235 Both INDEL 0007.scaffold00024 24315 1 T . scaffold10235 ReadM SNP 0007.scaffold00024 24753 1 G T - ReadM SNP 0007.scaffold00024 25535 1 C T - ReadM SNP 0007.scaffold00024 25609 1 A C - ReadM SNP 0007.scaffold00024 25717 1 G A - ReadM SNP 0007.scaffold00024 26061 1 G T - ScafM INDEL 0007.scaffold00024 26225 1 . A scaffold10235 ScafM SNP 0007.scaffold00024 26261 1 A G scaffold10235 ScafM SNP 0007.scaffold00024 26375 1 T C scaffold10235 ReadM SNP 0007.scaffold00024 26532 1 T C - ReadM SNP 0007.scaffold00024 26541 1 T C - ReadM SNP 0007.scaffold00024 27104 1 G A - ReadM SNP 0007.scaffold00024 27199 1 C T - ReadM SNP 0007.scaffold00024 27209 1 A G - ReadM INDEL 0007.scaffold00024 27799 1 . A - Both SNP 0007.scaffold00024 28111 1 A G scaffold10235 ReadM SNP 0007.scaffold00024 28136 1 C T - ReadM SNP 0007.scaffold00024 28148 1 G A - Both SNP 0007.scaffold00024 28317 1 G A scaffold10235 ScafM INDEL 0007.scaffold00024 28884 1 . G scaffold10235 Both SNP 0007.scaffold00024 29639 1 A G scaffold10235 ReadM SNP 0007.scaffold00024 30131 1 T G - Both SNP 0007.scaffold00024 30407 1 T C scaffold10235 Both SNP 0007.scaffold00024 30413 1 C A scaffold10235 Both SNP 0007.scaffold00024 30470 1 T C scaffold10235 Both SNP 0007.scaffold00024 30603 1 C T scaffold10235 Both SNP 0007.scaffold00024 31568 1 A G scaffold10235 ReadM SNP 0007.scaffold00024 31790 1 A T - Both SNP 0007.scaffold00024 31846 1 A C scaffold10235 Both SNP 0007.scaffold00024 31928 1 T C scaffold10235 Both SNP 0007.scaffold00024 31986 1 G T scaffold10235 Both SNP 0007.scaffold00024 32401 1 C T scaffold10235 Both SNP 0007.scaffold00024 32827 1 A G scaffold10235 Both SNP 0007.scaffold00024 32928 1 C T scaffold10235 Both SNP 0007.scaffold00024 32963 1 T C scaffold10235 Both SNP 0007.scaffold00024 33096 1 C A scaffold10235 ReadM SNP 0007.scaffold00024 33511 1 G T - ScafM INDEL 0007.scaffold00024 34091 5 ACGGG ..... scaffold10235 ScafM SNP 0007.scaffold00024 34113 2 AG CA scaffold10235 Both SNP 0007.scaffold00024 34534 1 C T scaffold10235 Both SNP 0007.scaffold00024 34642 1 A C scaffold10235 Both SNP 0007.scaffold00024 34789 1 C T scaffold10235 ScafM INDEL 0007.scaffold00024 34901 3 AAA ... scaffold10235 Both INDEL 0007.scaffold00024 35125 1 . T scaffold10235 Both SNP 0007.scaffold00024 35239 1 C G scaffold10235 Both SNP 0007.scaffold00024 35520 1 T A scaffold10235 ScafM INDEL 0007.scaffold00024 35590 5 ..... GGTAA scaffold10235 Both SNP 0007.scaffold00024 35635 1 A T scaffold10235 Both SNP 0007.scaffold00024 35732 1 G A scaffold10235 ScafM INDEL 0007.scaffold00024 35741 2 .C TT scaffold10235 Both INDEL 0007.scaffold00024 35770 1 A . scaffold10235 Both SNP 0007.scaffold00024 36159 1 C G scaffold10235 Both SNP 0007.scaffold00024 36339 1 C T scaffold10235 ReadM SNP 0007.scaffold00024 36528 1 C T - ReadM SNP 0007.scaffold00024 36588 1 C T - ReadM SNP 0007.scaffold00024 36653 1 A G - ReadM SNP 0007.scaffold00024 36733 1 C T - ReadM SNP 0007.scaffold00024 36824 1 C G - ReadM SNP 0007.scaffold00024 36961 1 T A - ReadM SNP 0007.scaffold00024 37251 1 A G - ReadM SNP 0007.scaffold00024 37334 1 C T - ReadM SNP 0007.scaffold00024 37348 1 T A - Both SNP 0007.scaffold00024 37782 1 T C scaffold10235 Both SNP 0007.scaffold00024 37807 1 T C scaffold10235 ReadM INDEL 0007.scaffold00024 37839 1 T . - ReadM SNP 0007.scaffold00024 38341 1 A C - ReadM SNP 0007.scaffold00024 38409 1 G A - ReadM SNP 0007.scaffold00024 38631 1 A G - ReadM SNP 0007.scaffold00024 38882 1 G T - ReadM SNP 0007.scaffold00024 39301 1 G T - ReadM SNP 0007.scaffold00024 39734 1 A C - ReadM SNP 0007.scaffold00024 40173 1 T A - ReadM SNP 0007.scaffold00024 40238 1 T C - ReadM SNP 0007.scaffold00024 40835 1 A C - ReadM SNP 0007.scaffold00024 41133 1 G A - ReadM SNP 0007.scaffold00024 41212 1 A G - ReadM SNP 0007.scaffold00024 42575 1 G T - ReadM SNP 0007.scaffold00024 42669 1 C G - ReadM SNP 0007.scaffold00024 43158 1 A G - ReadM SNP 0007.scaffold00024 43583 1 C G - ReadM SNP 0007.scaffold00024 43764 1 A C - ReadM SNP 0007.scaffold00024 43910 1 C T - ReadM SNP 0007.scaffold00024 44109 1 A G - ReadM SNP 0007.scaffold00024 44248 1 G A - ReadM SNP 0007.scaffold00024 44261 1 A G - ReadM SNP 0007.scaffold00024 44691 1 A G - ScafM SNP 0007.scaffold00024 45538 1 T G scaffold10235 ReadM SNP 0007.scaffold00024 46567 1 A G - ReadM SNP 0007.scaffold00024 46573 1 G T - ReadM SNP 0007.scaffold00024 46918 1 T G - ReadM SNP 0007.scaffold00024 47981 1 T C - Both INDEL 0007.scaffold00024 48076 1 A . scaffold364 Both SNP 0007.scaffold00024 48205 1 T A scaffold364 Both SNP 0007.scaffold00024 48288 1 C T scaffold364 Both SNP 0007.scaffold00024 48590 1 A T scaffold364 Both SNP 0007.scaffold00024 48596 1 A G scaffold364 ScafM SNP 0007.scaffold00024 48920 1 G A scaffold364 ScafM SNP 0007.scaffold00024 50465 1 A T scaffold364 Both SNP 0007.scaffold00024 50535 1 C T scaffold364 ScafM SNP 0007.scaffold00024 50616 1 G T scaffold364 ReadM SNP 0007.scaffold00024 50993 1 G T - ReadM SNP 0007.scaffold00024 51015 1 T A - ReadM SNP 0007.scaffold00024 51044 1 G A - ReadM SNP 0007.scaffold00024 51419 1 A G - ReadM SNP 0007.scaffold00024 51482 1 G A - ReadM SNP 0007.scaffold00024 51620 1 A G - ReadM SNP 0007.scaffold00024 51670 1 C T - ReadM SNP 0007.scaffold00024 51731 1 T G - ReadM SNP 0007.scaffold00024 51756 1 T G - ReadM SNP 0007.scaffold00024 52010 1 A G - ReadM INDEL 0007.scaffold00024 52773 1 T . - ReadM SNP 0007.scaffold00024 53010 1 C T - ReadM SNP 0007.scaffold00024 53242 1 G A - ReadM SNP 0007.scaffold00024 53355 1 T C - Both SNP 0007.scaffold00024 53708 1 T C scaffold364 Both SNP 0007.scaffold00024 53727 1 G C scaffold364 ReadM SNP 0007.scaffold00024 53883 1 A C - ReadM SNP 0007.scaffold00024 54042 1 C T - ReadM SNP 0007.scaffold00024 54849 1 T C - ReadM SNP 0007.scaffold00024 55308 1 G A - Both SNP 0007.scaffold00024 55579 1 T C scaffold364 Both SNP 0007.scaffold00024 56368 1 G A scaffold364 Both SNP 0007.scaffold00024 56746 1 G C scaffold364 ReadM SNP 0007.scaffold00024 56847 1 A T - ReadM SNP 0007.scaffold00024 56938 1 G C - ReadM SNP 0007.scaffold00024 57204 1 G A - ReadM INDEL 0007.scaffold00024 57244 2 .. CG - ReadM SNP 0007.scaffold00024 57328 1 C T - ReadM SNP 0007.scaffold00024 57349 1 T C - ReadM SNP 0007.scaffold00024 57473 1 T C - ReadM SNP 0007.scaffold00024 57480 1 C T - ReadM SNP 0007.scaffold00024 58783 1 T C - Both SNP 0007.scaffold00024 59796 1 T A scaffold364 ReadM SNP 0007.scaffold00024 60037 1 A T - ReadM SNP 0007.scaffold00024 60143 1 C T - ReadM SNP 0007.scaffold00024 60151 1 T C - ReadM SNP 0007.scaffold00024 60176 1 G C - ReadM SNP 0007.scaffold00024 60212 1 T C - ReadM SNP 0007.scaffold00024 60461 1 A G - ReadM SNP 0007.scaffold00024 60753 1 G A - ReadM SNP 0007.scaffold00024 60852 1 G A - ReadM SNP 0007.scaffold00024 61054 1 A G - ReadM SNP 0007.scaffold00024 61080 1 G A - ReadM SNP 0007.scaffold00024 61181 1 A G - ReadM SNP 0007.scaffold00024 61304 1 G A - ScafM INDEL 0007.scaffold00024 61417 1 T . scaffold364 Both SNP 0007.scaffold00024 61721 1 T G scaffold364 Both SNP 0007.scaffold00024 61955 1 G A scaffold364 Both SNP 0007.scaffold00024 62156 1 A T scaffold364 Both SNP 0007.scaffold00024 62189 1 C T scaffold364 Both SNP 0007.scaffold00024 62384 1 A G scaffold364 Both SNP 0007.scaffold00024 62679 1 A T scaffold364 Both SNP 0007.scaffold00024 62861 1 A C scaffold364 ScafM INDEL 0007.scaffold00024 62943 35 TGCTACAATTATCAACAAACACAGAAGAAATTTTG ................................... scaffold364 Both SNP 0007.scaffold00024 62994 1 G A scaffold364 Both SNP 0007.scaffold00024 63639 1 C G scaffold364 ScafM SNP 0007.scaffold00024 63760 1 C T scaffold364 ScafM SNP 0007.scaffold00024 63766 1 G C scaffold364 ScafM SNP 0007.scaffold00024 63819 1 C T scaffold364 Both SNP 0007.scaffold00024 63832 1 T C scaffold364 Both SNP 0007.scaffold00024 63843 1 G A scaffold364 Both SNP 0007.scaffold00024 63923 1 G A scaffold364 Both SNP 0007.scaffold00024 64123 1 T C scaffold364 Both SNP 0007.scaffold00024 64522 1 G A scaffold364 ReadM SNP 0007.scaffold00024 64709 1 C G - ReadM SNP 0007.scaffold00024 64751 1 A C - ReadM SNP 0007.scaffold00024 64897 1 T G - ReadM SNP 0007.scaffold00024 65137 1 C T - ReadM SNP 0007.scaffold00024 66305 1 T A - ReadM SNP 0007.scaffold00024 66455 1 T C - ReadM SNP 0007.scaffold00024 66504 1 A G - ReadM SNP 0007.scaffold00024 66588 1 A G - ReadM SNP 0007.scaffold00024 66613 1 T G - ReadM SNP 0007.scaffold00024 68355 1 T C - ReadM SNP 0007.scaffold00024 68395 1 T C - ReadM SNP 0007.scaffold00024 68415 1 C T - ReadM SNP 0007.scaffold00024 68533 1 T G - ReadM SNP 0007.scaffold00024 69145 1 T C - ScafM SNP 0007.scaffold00024 69360 1 T C scaffold11827 ScafM SNP 0007.scaffold00024 69442 1 T C scaffold11827 Both SNP 0007.scaffold00024 69492 1 A G scaffold11827 Both SNP 0007.scaffold00024 69736 1 C T scaffold364 ReadM SNP 0007.scaffold00024 70750 1 A G - ReadM SNP 0007.scaffold00024 70752 1 A T - ReadM SNP 0007.scaffold00024 70851 1 T G - ScafM SNP 0007.scaffold00024 71294 1 T C scaffold364 ReadM SNP 0007.scaffold00024 71815 1 A C - ReadM SNP 0007.scaffold00024 71843 1 G A - ReadM SNP 0007.scaffold00024 71903 1 C A - ReadM SNP 0007.scaffold00024 72055 1 A G - ReadM SNP 0007.scaffold00024 72951 1 A G - ScafM SNP 0007.scaffold00024 73369 2 TT CC scaffold364 ReadM SNP 0007.scaffold00024 73514 1 T A - ReadM SNP 0007.scaffold00024 73520 1 T C - ReadM SNP 0007.scaffold00024 73577 1 G T - ReadM INDEL 0007.scaffold00024 73936 2 .. CT - ReadM SNP 0007.scaffold00024 74220 1 T C - ReadM SNP 0007.scaffold00024 74575 1 T C - Both SNP 0007.scaffold00024 74883 1 A G scaffold364 Both SNP 0007.scaffold00024 75125 1 T C scaffold364 Both SNP 0007.scaffold00024 75164 1 C T scaffold364 Both SNP 0007.scaffold00024 75259 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 75304 1 A . scaffold364 ScafM INDEL 0007.scaffold00024 75481 2 .. AA scaffold364 Both SNP 0007.scaffold00024 75504 1 G A scaffold364 Both SNP 0007.scaffold00024 75584 1 C T scaffold364 Both SNP 0007.scaffold00024 75744 1 T G scaffold364 Both SNP 0007.scaffold00024 75828 1 T C scaffold364 Both SNP 0007.scaffold00024 75915 1 T A scaffold364 ReadM SNP 0007.scaffold00024 76277 1 A C - Both SNP 0007.scaffold00024 76303 1 C T scaffold364 Both SNP 0007.scaffold00024 76503 1 C T scaffold364 Both SNP 0007.scaffold00024 76524 1 G C scaffold364 Both SNP 0007.scaffold00024 76802 1 G A scaffold364 Both SNP 0007.scaffold00024 76891 1 A G scaffold364 Both SNP 0007.scaffold00024 76964 1 G A scaffold364 ReadM SNP 0007.scaffold00024 77110 1 A G - ReadM SNP 0007.scaffold00024 77122 1 C G - ReadM SNP 0007.scaffold00024 77848 1 G A - ReadM SNP 0007.scaffold00024 77993 1 C T - ReadM SNP 0007.scaffold00024 78159 1 A T - ReadM SNP 0007.scaffold00024 78259 1 A G - ReadM SNP 0007.scaffold00024 79046 1 A G - ReadM SNP 0007.scaffold00024 79077 1 T C - ReadM SNP 0007.scaffold00024 79225 1 A T - ReadM SNP 0007.scaffold00024 79256 1 T C - ReadM SNP 0007.scaffold00024 79984 1 G A - ReadM SNP 0007.scaffold00024 80026 1 A G - ReadM SNP 0007.scaffold00024 80178 1 A G - ReadM SNP 0007.scaffold00024 80206 1 A T - ReadM SNP 0007.scaffold00024 80403 1 G T - ReadM SNP 0007.scaffold00024 80470 1 T C - ReadM SNP 0007.scaffold00024 80824 1 A G - Both SNP 0007.scaffold00024 80949 1 G A scaffold364 Both INDEL 0007.scaffold00024 81075 1 . T scaffold364 Both INDEL 0007.scaffold00024 81099 1 A . scaffold364 ReadM SNP 0007.scaffold00024 81492 1 C T - ReadM SNP 0007.scaffold00024 81767 1 T C - ReadM SNP 0007.scaffold00024 81854 1 C T - Both SNP 0007.scaffold00024 82024 1 G A scaffold364 Both SNP 0007.scaffold00024 82192 1 G A scaffold364 Both SNP 0007.scaffold00024 82292 1 G T scaffold364 ScafM SNP 0007.scaffold00024 82795 1 A G scaffold364 ReadM INDEL 0007.scaffold00024 83050 1 . T - ReadM SNP 0007.scaffold00024 83095 1 G A - ReadM SNP 0007.scaffold00024 84312 1 T G - ReadM SNP 0007.scaffold00024 84341 1 G A - ScafM INDEL 0007.scaffold00024 84453 1 . G scaffold364 ReadM INDEL 0007.scaffold00024 84463 1 . A - Both SNP 0007.scaffold00024 84569 1 G A scaffold364 ReadM SNP 0007.scaffold00024 84943 1 T C - ReadM SNP 0007.scaffold00024 85112 1 C T - ReadM INDEL 0007.scaffold00024 85228 1 T . - ReadM INDEL 0007.scaffold00024 85310 1 T . - ReadM SNP 0007.scaffold00024 85442 1 G T - ReadM SNP 0007.scaffold00024 85627 1 A G - ReadM SNP 0007.scaffold00024 85699 1 A G - ReadM SNP 0007.scaffold00024 85707 1 A G - Both INDEL 0007.scaffold00024 85792 1 T . scaffold364 ScafM INDEL 0007.scaffold00024 85986 8 AATATCAG ........ scaffold364 ScafM INDEL 0007.scaffold00024 86052 6 ...... CAGGCT scaffold364 ScafM SNP 0007.scaffold00024 86108 1 T G scaffold364 ScafM SNP 0007.scaffold00024 86115 1 G A scaffold364 ScafM SNP 0007.scaffold00024 86124 1 T C scaffold364 ScafM SNP 0007.scaffold00024 86132 3 TTT GCA scaffold364 ScafM SNP 0007.scaffold00024 86151 1 C T scaffold364 ScafM SNP 0007.scaffold00024 86155 1 G A scaffold364 ScafM SNP 0007.scaffold00024 86184 1 T C scaffold364 ScafM SNP 0007.scaffold00024 86239 1 A G scaffold364 ScafM SNP 0007.scaffold00024 86245 1 G A scaffold364 ScafM SNP 0007.scaffold00024 86260 1 T C scaffold364 ScafM SNP 0007.scaffold00024 86304 1 C G scaffold364 ScafM SNP 0007.scaffold00024 86316 1 G A scaffold364 ScafM SNP 0007.scaffold00024 87001 1 T A scaffold364 ScafM SNP 0007.scaffold00024 87026 1 T G scaffold364 ReadM SNP 0007.scaffold00024 87534 1 A G - ReadM SNP 0007.scaffold00024 87539 1 T A - ReadM SNP 0007.scaffold00024 89172 1 C T - ReadM INDEL 0007.scaffold00024 89190 1 . T - ReadM SNP 0007.scaffold00024 89261 1 A T - ReadM SNP 0007.scaffold00024 89535 1 C T - ReadM SNP 0007.scaffold00024 89557 1 C G - ReadM SNP 0007.scaffold00024 89560 1 A G - ReadM SNP 0007.scaffold00024 89677 1 T C - ReadM INDEL 0007.scaffold00024 89682 1 . T - ReadM SNP 0007.scaffold00024 89686 1 G T - ReadM SNP 0007.scaffold00024 89717 1 C A - ReadM SNP 0007.scaffold00024 89790 1 C T - ReadM SNP 0007.scaffold00024 89832 1 A C - ReadM SNP 0007.scaffold00024 90015 1 G T - Both SNP 0007.scaffold00024 90048 1 T C scaffold364 Both SNP 0007.scaffold00024 90061 1 T G scaffold364 ScafM INDEL 0007.scaffold00024 90125 21 ..................... AAATCTGGACAACAAATGTTA scaffold364 ScafM INDEL 0007.scaffold00024 90127 4 .... AATC scaffold364 ScafM INDEL 0007.scaffold00024 90130 4 .... AAAA scaffold364 ScafM INDEL 0007.scaffold00024 90132 2 .. AT scaffold364 ScafM INDEL 0007.scaffold00024 90133 2 .. TC scaffold364 ScafM INDEL 0007.scaffold00024 90136 4 .... ATCC scaffold364 ScafM INDEL 0007.scaffold00024 90139 4 .... GACG scaffold364 Both SNP 0007.scaffold00024 90155 1 T C scaffold364 Both SNP 0007.scaffold00024 90248 1 A G scaffold364 Both SNP 0007.scaffold00024 90263 1 C T scaffold364 Both SNP 0007.scaffold00024 90279 1 C A scaffold364 ReadM SNP 0007.scaffold00024 90433 1 G A - ReadM SNP 0007.scaffold00024 90437 1 G A - ReadM SNP 0007.scaffold00024 90486 1 A C - ReadM SNP 0007.scaffold00024 90560 1 T G - ReadM SNP 0007.scaffold00024 90577 1 A C - ReadM SNP 0007.scaffold00024 90607 1 C G - ScafM INDEL 0007.scaffold00024 90641 2 .. AC scaffold364 ScafM SNP 0007.scaffold00024 90664 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 90688 9 CAATTTCCC ......... scaffold364 ScafM INDEL 0007.scaffold00024 90701 7 TCGGCTA ....... scaffold364 ScafM INDEL 0007.scaffold00024 90710 1 C . scaffold364 ScafM SNP 0007.scaffold00024 90726 1 T A scaffold364 ScafM SNP 0007.scaffold00024 90728 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 90761 1 T . scaffold364 ScafM SNP 0007.scaffold00024 90771 1 G T scaffold364 ScafM SNP 0007.scaffold00024 90777 1 C A scaffold364 ScafM SNP 0007.scaffold00024 90781 1 C G scaffold364 ScafM SNP 0007.scaffold00024 90803 1 T A scaffold364 ScafM SNP 0007.scaffold00024 90822 1 T C scaffold364 ScafM SNP 0007.scaffold00024 90825 1 C G scaffold364 ScafM SNP 0007.scaffold00024 90862 1 T C scaffold364 ScafM SNP 0007.scaffold00024 90872 1 T C scaffold364 ScafM SNP 0007.scaffold00024 90876 1 G A scaffold364 ScafM SNP 0007.scaffold00024 90881 1 T C scaffold364 ScafM SNP 0007.scaffold00024 90931 1 G A scaffold364 ScafM SNP 0007.scaffold00024 90939 1 A T scaffold364 ReadM SNP 0007.scaffold00024 91003 1 T C - ReadM SNP 0007.scaffold00024 91030 1 G A - ReadM SNP 0007.scaffold00024 91180 1 T G - ReadM SNP 0007.scaffold00024 91242 1 T C - ReadM SNP 0007.scaffold00024 91245 1 T A - ReadM SNP 0007.scaffold00024 91308 1 T G - ScafM SNP 0007.scaffold00024 91322 1 A T scaffold364 Both SNP 0007.scaffold00024 91427 1 G A scaffold364 Both SNP 0007.scaffold00024 91608 1 T G scaffold364 Both SNP 0007.scaffold00024 91639 1 C T scaffold364 ReadM INDEL 0007.scaffold00024 91670 1 A . - ScafM INDEL 0007.scaffold00024 91670 2 AA .G scaffold364 Both SNP 0007.scaffold00024 91741 1 A G scaffold364 Both SNP 0007.scaffold00024 91849 1 C T scaffold364 Both SNP 0007.scaffold00024 91936 1 T A scaffold364 ScafM SNP 0007.scaffold00024 91963 2 TT AA scaffold364 ScafM SNP 0007.scaffold00024 91986 1 C T scaffold364 Both SNP 0007.scaffold00024 91998 1 C G scaffold364 Both SNP 0007.scaffold00024 92060 1 C A scaffold364 Both SNP 0007.scaffold00024 92074 1 A G scaffold364 Both SNP 0007.scaffold00024 92293 1 A G scaffold364 Both INDEL 0007.scaffold00024 92333 1 . C scaffold364 Both SNP 0007.scaffold00024 92375 1 A C scaffold364 ReadM SNP 0007.scaffold00024 92424 1 T G - Both SNP 0007.scaffold00024 92553 1 T G scaffold364 Both SNP 0007.scaffold00024 92579 1 C G scaffold364 Both SNP 0007.scaffold00024 92612 1 T C scaffold364 Both SNP 0007.scaffold00024 92685 1 C A scaffold364 Both SNP 0007.scaffold00024 92849 1 T C scaffold364 Both SNP 0007.scaffold00024 92855 1 C T scaffold364 Both SNP 0007.scaffold00024 92907 1 G A scaffold364 Both SNP 0007.scaffold00024 92978 1 T C scaffold364 Both SNP 0007.scaffold00024 93085 1 T G scaffold364 Both SNP 0007.scaffold00024 93093 1 G A scaffold364 Both SNP 0007.scaffold00024 93159 1 G A scaffold364 Both INDEL 0007.scaffold00024 93163 1 T . scaffold364 Both SNP 0007.scaffold00024 93192 1 T C scaffold364 Both SNP 0007.scaffold00024 93632 1 A G scaffold364 Both SNP 0007.scaffold00024 93696 1 T C scaffold364 Both SNP 0007.scaffold00024 93698 1 G C scaffold364 ScafM SNP 0007.scaffold00024 93736 1 T C scaffold364 ScafM SNP 0007.scaffold00024 93748 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 93790 8 GACCTGTG ........ scaffold364 ScafM SNP 0007.scaffold00024 93803 1 T A scaffold364 ScafM SNP 0007.scaffold00024 93806 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 93843 1 . A scaffold364 ScafM SNP 0007.scaffold00024 93874 1 G T scaffold364 ScafM INDEL 0007.scaffold00024 93911 3 TGT ... scaffold364 ScafM INDEL 0007.scaffold00024 93917 2 .. AA scaffold364 ScafM SNP 0007.scaffold00024 93941 1 T G scaffold364 ScafM SNP 0007.scaffold00024 93952 1 A C scaffold364 ScafM SNP 0007.scaffold00024 93976 1 T C scaffold364 ScafM SNP 0007.scaffold00024 93982 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 93989 3 ... GAT scaffold364 ScafM SNP 0007.scaffold00024 94000 1 T C scaffold364 ScafM SNP 0007.scaffold00024 94049 1 C T scaffold364 ScafM SNP 0007.scaffold00024 94052 1 C T scaffold364 ScafM SNP 0007.scaffold00024 94088 1 T A scaffold364 ScafM SNP 0007.scaffold00024 94090 1 A T scaffold364 ScafM SNP 0007.scaffold00024 94095 1 G A scaffold364 ScafM SNP 0007.scaffold00024 94117 1 C T scaffold364 ScafM SNP 0007.scaffold00024 94168 1 G A scaffold364 ScafM SNP 0007.scaffold00024 94181 1 A G scaffold364 ReadM SNP 0007.scaffold00024 94302 1 C T - ReadM SNP 0007.scaffold00024 94324 1 T A - ReadM SNP 0007.scaffold00024 94506 1 C T - ScafM INDEL 0007.scaffold00024 94702 3 AAC ... scaffold364 ScafM SNP 0007.scaffold00024 95061 1 C T scaffold8544 ScafM SNP 0007.scaffold00024 95140 1 C T scaffold8544 ReadM SNP 0007.scaffold00024 95702 1 A G - Both INDEL 0007.scaffold00024 96117 1 T . scaffold8544 ScafM SNP 0007.scaffold00024 96270 1 A C scaffold8544 ScafM SNP 0007.scaffold00024 96299 2 TA AT scaffold8544 ScafM SNP 0007.scaffold00024 96364 1 G A scaffold8544 ScafM INDEL 0007.scaffold00024 96502 1 . T scaffold8544 ScafM SNP 0007.scaffold00024 106108 1 G A scaffold364 ScafM SNP 0007.scaffold00024 106137 1 G A scaffold364 ScafM SNP 0007.scaffold00024 106279 1 C T scaffold364 ScafM SNP 0007.scaffold00024 106306 1 T C scaffold364 ScafM SNP 0007.scaffold00024 106348 1 T C scaffold364 Both SNP 0007.scaffold00024 106386 1 T C scaffold364 ReadM INDEL 0007.scaffold00024 106645 2 GG .. - ReadM SNP 0007.scaffold00024 106716 1 G A - ReadM SNP 0007.scaffold00024 106897 1 T C - ReadM SNP 0007.scaffold00024 106972 1 A G - ReadM SNP 0007.scaffold00024 107305 1 T C - ReadM SNP 0007.scaffold00024 107333 1 A C - ReadM SNP 0007.scaffold00024 107473 1 C T - ReadM SNP 0007.scaffold00024 107487 1 G A - ReadM SNP 0007.scaffold00024 107586 1 T C - ReadM SNP 0007.scaffold00024 107685 1 G T - ReadM SNP 0007.scaffold00024 107687 1 G C - ReadM SNP 0007.scaffold00024 107719 1 G A - ReadM SNP 0007.scaffold00024 107790 1 T C - ReadM SNP 0007.scaffold00024 107814 1 A G - ReadM SNP 0007.scaffold00024 107855 1 A G - ReadM SNP 0007.scaffold00024 107887 1 G A - ReadM SNP 0007.scaffold00024 107990 1 T A - ReadM SNP 0007.scaffold00024 108039 1 T C - ReadM SNP 0007.scaffold00024 108109 1 C T - ReadM SNP 0007.scaffold00024 108208 1 G T - ReadM SNP 0007.scaffold00024 108236 1 T C - ReadM SNP 0007.scaffold00024 108324 1 C T - ReadM INDEL 0007.scaffold00024 108593 1 T . - ReadM SNP 0007.scaffold00024 108660 1 T C - ReadM INDEL 0007.scaffold00024 108679 1 . A - ReadM SNP 0007.scaffold00024 108748 1 C T - ReadM SNP 0007.scaffold00024 108764 1 C T - ReadM SNP 0007.scaffold00024 108822 1 C T - ReadM SNP 0007.scaffold00024 108843 1 C T - ReadM SNP 0007.scaffold00024 108895 1 A G - ReadM SNP 0007.scaffold00024 109156 1 G A - ReadM SNP 0007.scaffold00024 109174 1 C T - ReadM SNP 0007.scaffold00024 109199 1 T G - ReadM SNP 0007.scaffold00024 109236 1 G T - ReadM SNP 0007.scaffold00024 109521 1 A T - ReadM SNP 0007.scaffold00024 109546 1 A G - ReadM SNP 0007.scaffold00024 109582 1 C A - ReadM SNP 0007.scaffold00024 109703 1 A G - ReadM SNP 0007.scaffold00024 109721 1 C G - ReadM SNP 0007.scaffold00024 109744 1 A G - ReadM SNP 0007.scaffold00024 109805 1 G C - ReadM SNP 0007.scaffold00024 109881 1 C T - ReadM SNP 0007.scaffold00024 109922 1 C G - ReadM SNP 0007.scaffold00024 109991 1 G A - ReadM SNP 0007.scaffold00024 110091 1 T C - Both SNP 0007.scaffold00024 110106 1 C T scaffold364 Both SNP 0007.scaffold00024 110146 1 A G scaffold364 Both SNP 0007.scaffold00024 110149 1 A G scaffold364 ReadM SNP 0007.scaffold00024 110275 1 C T - ReadM SNP 0007.scaffold00024 110424 1 A G - ReadM SNP 0007.scaffold00024 110438 1 C T - ReadM SNP 0007.scaffold00024 110482 1 C A - ReadM SNP 0007.scaffold00024 110540 1 T C - ReadM SNP 0007.scaffold00024 110565 1 C T - ReadM SNP 0007.scaffold00024 110643 1 A G - ReadM SNP 0007.scaffold00024 110836 1 A G - ReadM SNP 0007.scaffold00024 110838 1 A G - ReadM SNP 0007.scaffold00024 110861 1 C T - ScafM SNP 0007.scaffold00024 110960 1 G A scaffold364 Both SNP 0007.scaffold00024 111000 1 T A scaffold364 Both SNP 0007.scaffold00024 111005 1 C A scaffold364 ScafM SNP 0007.scaffold00024 111050 1 G A scaffold364 ReadM SNP 0007.scaffold00024 111107 1 C T - ReadM SNP 0007.scaffold00024 111159 1 C G - ReadM SNP 0007.scaffold00024 111166 1 C T - ReadM SNP 0007.scaffold00024 111208 1 C T - ReadM SNP 0007.scaffold00024 111243 1 C G - ReadM SNP 0007.scaffold00024 111281 1 G C - ReadM SNP 0007.scaffold00024 111289 1 T C - ReadM SNP 0007.scaffold00024 113156 1 T A - ReadM SNP 0007.scaffold00024 113162 1 T C - ReadM INDEL 0007.scaffold00024 113241 1 . A - ScafM SNP 0007.scaffold00024 115498 1 G C scaffold364 ScafM SNP 0007.scaffold00024 115506 1 C T scaffold364 ScafM SNP 0007.scaffold00024 115532 1 A G scaffold364 ScafM SNP 0007.scaffold00024 115540 1 T C scaffold364 ScafM SNP 0007.scaffold00024 115548 1 C T scaffold364 ScafM SNP 0007.scaffold00024 115594 1 A G scaffold364 ReadM SNP 0007.scaffold00024 115855 1 G T - ReadM SNP 0007.scaffold00024 115899 1 T C - ReadM SNP 0007.scaffold00024 115912 1 G A - ReadM SNP 0007.scaffold00024 115947 1 A G - ReadM SNP 0007.scaffold00024 116214 1 T C - ReadM SNP 0007.scaffold00024 116216 1 A C - ReadM SNP 0007.scaffold00024 116304 1 C A - ReadM SNP 0007.scaffold00024 116627 1 T A - ScafM SNP 0007.scaffold00024 116957 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 116998 20 .................... CCAGATTTCGTCCGAGCTGA scaffold364 ScafM SNP 0007.scaffold00024 117061 1 A C scaffold364 ReadM SNP 0007.scaffold00024 119375 1 G A - ReadM SNP 0007.scaffold00024 119396 1 C T - ReadM SNP 0007.scaffold00024 119452 1 T C - ReadM SNP 0007.scaffold00024 119616 1 T C - ReadM SNP 0007.scaffold00024 119657 1 G A - ReadM SNP 0007.scaffold00024 119701 1 C A - ReadM SNP 0007.scaffold00024 119709 1 C T - ReadM SNP 0007.scaffold00024 119807 1 G A - Both SNP 0007.scaffold00024 119928 1 C A scaffold364 Both SNP 0007.scaffold00024 120005 1 G A scaffold364 Both SNP 0007.scaffold00024 120013 1 G A scaffold364 Both SNP 0007.scaffold00024 120017 1 T C scaffold364 ScafM SNP 0007.scaffold00024 120058 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 120083 3 ... GGG scaffold364 ScafM SNP 0007.scaffold00024 120085 1 A G scaffold364 Both SNP 0007.scaffold00024 120145 1 T A scaffold364 ReadM SNP 0007.scaffold00024 120244 1 T C - ReadM SNP 0007.scaffold00024 120373 1 T C - ReadM SNP 0007.scaffold00024 120702 1 G A - ReadM SNP 0007.scaffold00024 120931 1 A C - ReadM SNP 0007.scaffold00024 121023 1 G T - ReadM SNP 0007.scaffold00024 121029 1 C T - ReadM SNP 0007.scaffold00024 121090 1 G A - ScafM SNP 0007.scaffold00024 121171 1 A G scaffold364 ScafM INDEL 0007.scaffold00024 121199 1 . T scaffold364 ScafM INDEL 0007.scaffold00024 121203 1 T . scaffold364 Both SNP 0007.scaffold00024 121255 1 G A scaffold364 Both SNP 0007.scaffold00024 121338 1 C G scaffold364 Both SNP 0007.scaffold00024 121341 1 T C scaffold364 ReadM SNP 0007.scaffold00024 121501 1 T C - ReadM SNP 0007.scaffold00024 121692 1 T C - ReadM SNP 0007.scaffold00024 121762 1 G A - ReadM INDEL 0007.scaffold00024 121779 1 T . - ScafM SNP 0007.scaffold00024 121915 1 A T scaffold364 ScafM SNP 0007.scaffold00024 121954 1 C T scaffold364 ScafM SNP 0007.scaffold00024 121961 1 C T scaffold364 ReadM INDEL 0007.scaffold00024 122128 2 .. TT - ReadM SNP 0007.scaffold00024 122280 1 G A - ReadM SNP 0007.scaffold00024 122385 1 C T - ReadM SNP 0007.scaffold00024 122428 1 A T - ReadM SNP 0007.scaffold00024 122470 1 G A - ReadM SNP 0007.scaffold00024 122547 1 A C - ReadM SNP 0007.scaffold00024 122552 1 G T - Both SNP 0007.scaffold00024 122690 1 C T scaffold364 Both SNP 0007.scaffold00024 122757 1 C T scaffold364 Both SNP 0007.scaffold00024 122836 1 G T scaffold364 ReadM SNP 0007.scaffold00024 122941 1 C T - ReadM SNP 0007.scaffold00024 123009 2 AT GG - ReadM SNP 0007.scaffold00024 123041 1 G A - ReadM SNP 0007.scaffold00024 123075 1 T G - ReadM SNP 0007.scaffold00024 123082 1 A G - ReadM SNP 0007.scaffold00024 123104 1 T C - ReadM SNP 0007.scaffold00024 123156 1 A G - ReadM SNP 0007.scaffold00024 123219 1 G A - ReadM SNP 0007.scaffold00024 123235 1 A G - ReadM SNP 0007.scaffold00024 123431 1 G T - ReadM SNP 0007.scaffold00024 123526 1 G A - ReadM SNP 0007.scaffold00024 123570 1 G C - ReadM SNP 0007.scaffold00024 123594 1 G A - ReadM SNP 0007.scaffold00024 123706 1 T C - ReadM SNP 0007.scaffold00024 123719 1 G A - ReadM SNP 0007.scaffold00024 123723 1 T C - ReadM SNP 0007.scaffold00024 123853 1 A G - ReadM SNP 0007.scaffold00024 123863 1 G A - ReadM SNP 0007.scaffold00024 123872 1 T C - ReadM SNP 0007.scaffold00024 123921 1 A T - ReadM SNP 0007.scaffold00024 123943 1 G A - ReadM SNP 0007.scaffold00024 124039 1 T C - ReadM SNP 0007.scaffold00024 124057 1 A G - ReadM SNP 0007.scaffold00024 124104 1 A G - ReadM SNP 0007.scaffold00024 124107 1 T G - ReadM SNP 0007.scaffold00024 124193 1 A G - ReadM SNP 0007.scaffold00024 124309 1 C T - ReadM SNP 0007.scaffold00024 124508 1 G T - ReadM SNP 0007.scaffold00024 124573 1 T C - ReadM SNP 0007.scaffold00024 124595 1 A G - ReadM SNP 0007.scaffold00024 124597 1 A G - ReadM SNP 0007.scaffold00024 124636 1 T A - ReadM SNP 0007.scaffold00024 124700 1 A G - ReadM SNP 0007.scaffold00024 124717 1 G A - ReadM SNP 0007.scaffold00024 124924 1 C A - ReadM SNP 0007.scaffold00024 125007 1 A G - ReadM SNP 0007.scaffold00024 125115 1 A G - ReadM SNP 0007.scaffold00024 125167 1 G A - ReadM SNP 0007.scaffold00024 125219 1 G A - ReadM INDEL 0007.scaffold00024 125229 1 . C - ReadM SNP 0007.scaffold00024 125281 1 A G - ReadM SNP 0007.scaffold00024 125305 1 A G - ScafM SNP 0007.scaffold00024 125349 1 G T scaffold364 ScafM SNP 0007.scaffold00024 125353 1 C G scaffold364 Both SNP 0007.scaffold00024 125410 1 C T scaffold364 Both SNP 0007.scaffold00024 125463 1 A G scaffold364 ReadM SNP 0007.scaffold00024 125700 1 C T - ReadM SNP 0007.scaffold00024 125754 1 C A - ReadM SNP 0007.scaffold00024 125788 1 T C - ReadM SNP 0007.scaffold00024 125827 1 T C - ReadM SNP 0007.scaffold00024 125870 1 C T - ReadM SNP 0007.scaffold00024 126026 1 C T - ReadM SNP 0007.scaffold00024 126040 1 T C - Both SNP 0007.scaffold00024 126175 1 T C scaffold364 Both SNP 0007.scaffold00024 126229 1 T C scaffold364 Both SNP 0007.scaffold00024 126254 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 126310 10 .......... CGAAGTCTTT scaffold364 Both SNP 0007.scaffold00024 126321 1 T C scaffold364 Both SNP 0007.scaffold00024 126375 1 T C scaffold364 ReadM SNP 0007.scaffold00024 126435 1 C T - ReadM SNP 0007.scaffold00024 126443 1 C G - ReadM SNP 0007.scaffold00024 126553 1 G A - ReadM SNP 0007.scaffold00024 126615 1 C T - Both SNP 0007.scaffold00024 126734 1 T C scaffold364 Both INDEL 0007.scaffold00024 126750 1 T . scaffold364 Both SNP 0007.scaffold00024 126785 1 T C scaffold364 ScafM SNP 0007.scaffold00024 126806 1 A G scaffold364 ScafM SNP 0007.scaffold00024 126809 1 G T scaffold364 Both SNP 0007.scaffold00024 126873 1 G C scaffold364 Both SNP 0007.scaffold00024 126880 1 A G scaffold364 Both SNP 0007.scaffold00024 126897 1 G C scaffold364 ScafM SNP 0007.scaffold00024 126947 1 T C scaffold364 Both SNP 0007.scaffold00024 126974 1 C A scaffold364 Both SNP 0007.scaffold00024 126991 1 A G scaffold364 Both SNP 0007.scaffold00024 127003 1 C G scaffold364 Both SNP 0007.scaffold00024 127055 1 T G scaffold364 Both SNP 0007.scaffold00024 127063 1 G A scaffold364 Both SNP 0007.scaffold00024 127092 1 T C scaffold364 Both SNP 0007.scaffold00024 127133 1 A T scaffold364 Both SNP 0007.scaffold00024 127153 1 T A scaffold364 Both SNP 0007.scaffold00024 127189 1 C A scaffold364 Both SNP 0007.scaffold00024 127245 1 A C scaffold364 Both SNP 0007.scaffold00024 127337 1 A T scaffold364 Both SNP 0007.scaffold00024 127385 1 G A scaffold364 Both SNP 0007.scaffold00024 127388 1 A T scaffold364 Both SNP 0007.scaffold00024 127454 1 A G scaffold364 Both SNP 0007.scaffold00024 127472 1 T C scaffold364 Both SNP 0007.scaffold00024 127537 1 C T scaffold364 ScafM SNP 0007.scaffold00024 127564 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 127567 1 T . scaffold364 ScafM SNP 0007.scaffold00024 127610 1 A T scaffold364 ScafM SNP 0007.scaffold00024 127772 1 C A scaffold364 ScafM SNP 0007.scaffold00024 127784 2 CA AG scaffold364 ScafM SNP 0007.scaffold00024 127797 1 T G scaffold364 ScafM SNP 0007.scaffold00024 127834 1 G C scaffold364 ScafM SNP 0007.scaffold00024 127920 1 A G scaffold364 ScafM SNP 0007.scaffold00024 127927 1 G T scaffold364 ReadM SNP 0007.scaffold00024 129388 1 A C - ReadM SNP 0007.scaffold00024 129517 1 T A - ReadM SNP 0007.scaffold00024 129592 1 C T - ReadM SNP 0007.scaffold00024 129604 1 G A - ReadM SNP 0007.scaffold00024 129687 1 T C - ReadM SNP 0007.scaffold00024 129708 1 A G - ReadM SNP 0007.scaffold00024 129733 1 A G - Both SNP 0007.scaffold00024 129781 1 G A scaffold364 ScafM SNP 0007.scaffold00024 129815 1 A G scaffold364 Both SNP 0007.scaffold00024 129821 1 G C scaffold364 ScafM SNP 0007.scaffold00024 129870 2 AC GT scaffold364 Both SNP 0007.scaffold00024 129967 1 A G scaffold364 Both SNP 0007.scaffold00024 129982 1 A T scaffold364 Both SNP 0007.scaffold00024 130012 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 130039 2 .. TT scaffold364 ScafM SNP 0007.scaffold00024 130051 1 C A scaffold364 ReadM INDEL 0007.scaffold00024 130150 1 A . - ReadM SNP 0007.scaffold00024 130215 1 T C - ReadM SNP 0007.scaffold00024 130235 1 T C - Both SNP 0007.scaffold00024 130364 1 A C scaffold364 Both INDEL 0007.scaffold00024 130376 1 A . scaffold364 Both SNP 0007.scaffold00024 130419 1 C G scaffold364 ScafM SNP 0007.scaffold00024 130493 2 CT GA scaffold364 ScafM SNP 0007.scaffold00024 130501 1 T C scaffold364 ScafM SNP 0007.scaffold00024 130519 1 G A scaffold364 ScafM SNP 0007.scaffold00024 130536 1 T G scaffold364 ScafM SNP 0007.scaffold00024 130540 1 T A scaffold364 ScafM SNP 0007.scaffold00024 130553 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 130754 1 . T scaffold364 Both INDEL 0007.scaffold00024 130978 2 .. AT scaffold364 Both SNP 0007.scaffold00024 131078 1 G A scaffold364 Both SNP 0007.scaffold00024 131108 1 A G scaffold364 Both INDEL 0007.scaffold00024 131200 1 T . scaffold364 Both SNP 0007.scaffold00024 131211 1 C T scaffold364 Both SNP 0007.scaffold00024 131277 1 C T scaffold364 Both SNP 0007.scaffold00024 131599 1 G C scaffold364 Both SNP 0007.scaffold00024 131648 1 A G scaffold364 ScafM INDEL 0007.scaffold00024 131696 1 A . scaffold364 ScafM SNP 0007.scaffold00024 131701 2 AA GT scaffold364 ScafM SNP 0007.scaffold00024 131718 1 C G scaffold364 ScafM SNP 0007.scaffold00024 131738 1 A C scaffold364 ScafM SNP 0007.scaffold00024 131745 1 T C scaffold364 ScafM SNP 0007.scaffold00024 131761 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 131777 3 AAT ... scaffold364 ScafM SNP 0007.scaffold00024 131806 1 G T scaffold364 ScafM SNP 0007.scaffold00024 131826 1 T C scaffold364 ScafM SNP 0007.scaffold00024 131829 1 T C scaffold364 Both SNP 0007.scaffold00024 131840 1 A C scaffold364 Both SNP 0007.scaffold00024 131972 1 A G scaffold364 Both SNP 0007.scaffold00024 131975 1 T C scaffold364 Both SNP 0007.scaffold00024 131981 1 G A scaffold364 Both SNP 0007.scaffold00024 132185 1 A G scaffold364 Both SNP 0007.scaffold00024 132286 1 C A scaffold364 Both SNP 0007.scaffold00024 132300 1 G A scaffold364 ScafM SNP 0007.scaffold00024 132307 1 T A scaffold364 ScafM INDEL 0007.scaffold00024 132348 2 GG .. scaffold364 Both SNP 0007.scaffold00024 132553 1 C T scaffold364 Both SNP 0007.scaffold00024 132593 1 C T scaffold364 Both SNP 0007.scaffold00024 132786 1 C T scaffold364 ScafM SNP 0007.scaffold00024 132805 1 G A scaffold364 ScafM SNP 0007.scaffold00024 132854 2 CT TC scaffold364 ScafM SNP 0007.scaffold00024 132863 1 T C scaffold364 ScafM SNP 0007.scaffold00024 132871 1 A C scaffold364 ReadM SNP 0007.scaffold00024 132929 1 G T - Both SNP 0007.scaffold00024 132966 1 T G scaffold364 Both SNP 0007.scaffold00024 132990 1 C T scaffold364 ScafM SNP 0007.scaffold00024 133025 1 C T scaffold364 ScafM SNP 0007.scaffold00024 133033 1 C T scaffold364 ScafM SNP 0007.scaffold00024 133072 1 C T scaffold364 ScafM SNP 0007.scaffold00024 133090 1 T C scaffold364 ScafM SNP 0007.scaffold00024 133395 1 A G scaffold364 ScafM SNP 0007.scaffold00024 133400 1 A G scaffold364 Both SNP 0007.scaffold00024 133438 1 T C scaffold364 Both SNP 0007.scaffold00024 133486 1 A T scaffold364 ScafM SNP 0007.scaffold00024 133497 1 C G scaffold364 ScafM SNP 0007.scaffold00024 133523 1 T C scaffold364 ReadM SNP 0007.scaffold00024 133642 1 G A - ReadM SNP 0007.scaffold00024 133659 1 A G - ReadM SNP 0007.scaffold00024 133712 1 T C - ReadM SNP 0007.scaffold00024 133722 1 C T - ReadM SNP 0007.scaffold00024 133750 1 C T - ReadM SNP 0007.scaffold00024 133801 1 T C - ReadM SNP 0007.scaffold00024 133808 1 G A - ReadM SNP 0007.scaffold00024 133827 1 T G - ReadM SNP 0007.scaffold00024 133897 1 T A - ReadM SNP 0007.scaffold00024 133980 1 T C - ReadM SNP 0007.scaffold00024 134160 1 T C - ReadM SNP 0007.scaffold00024 134174 1 G A - ReadM SNP 0007.scaffold00024 134196 1 A G - ReadM SNP 0007.scaffold00024 134413 1 C G - Both INDEL 0007.scaffold00024 134476 1 G . scaffold364 Both SNP 0007.scaffold00024 134526 1 G A scaffold364 ReadM INDEL 0007.scaffold00024 134652 1 . A - ReadM SNP 0007.scaffold00024 134680 1 G T - ReadM SNP 0007.scaffold00024 134684 1 A G - ReadM SNP 0007.scaffold00024 134801 1 A G - ReadM SNP 0007.scaffold00024 134809 1 A G - Both SNP 0007.scaffold00024 134832 1 A G scaffold364 ReadM SNP 0007.scaffold00024 134982 1 T C - ReadM SNP 0007.scaffold00024 135050 1 T C - ReadM SNP 0007.scaffold00024 135071 1 C A - ReadM SNP 0007.scaffold00024 135171 1 G A - ReadM SNP 0007.scaffold00024 135207 1 G C - ScafM SNP 0007.scaffold00024 135399 1 C T scaffold364 ScafM SNP 0007.scaffold00024 136377 1 G T scaffold364 ScafM SNP 0007.scaffold00024 136419 1 C A scaffold364 ScafM SNP 0007.scaffold00024 136432 1 T G scaffold364 ScafM SNP 0007.scaffold00024 136454 1 T C scaffold364 ScafM SNP 0007.scaffold00024 136510 1 A G scaffold364 ScafM SNP 0007.scaffold00024 136543 1 G A scaffold364 ScafM SNP 0007.scaffold00024 136567 1 T C scaffold364 ScafM SNP 0007.scaffold00024 136597 1 A T scaffold364 ScafM INDEL 0007.scaffold00024 136605 1 C . scaffold364 ScafM SNP 0007.scaffold00024 136614 1 G A scaffold364 ScafM SNP 0007.scaffold00024 136646 1 C T scaffold364 ScafM SNP 0007.scaffold00024 136651 1 G A scaffold364 ReadM SNP 0007.scaffold00024 136787 1 C G - ReadM SNP 0007.scaffold00024 136791 1 G T - ReadM SNP 0007.scaffold00024 136870 1 A G - ReadM SNP 0007.scaffold00024 136887 1 T C - ReadM SNP 0007.scaffold00024 136965 1 C T - ReadM INDEL 0007.scaffold00024 136972 1 . A - ReadM SNP 0007.scaffold00024 137059 1 T C - ReadM SNP 0007.scaffold00024 137096 1 G A - Both SNP 0007.scaffold00024 137124 1 A G scaffold364 Both SNP 0007.scaffold00024 137436 1 G C scaffold364 Both SNP 0007.scaffold00024 137707 1 A T scaffold364 Both SNP 0007.scaffold00024 137723 1 A C scaffold364 ScafM SNP 0007.scaffold00024 137730 1 A T scaffold364 ReadM SNP 0007.scaffold00024 137867 1 C T - ReadM SNP 0007.scaffold00024 137933 1 T G - ReadM SNP 0007.scaffold00024 137938 1 C T - ReadM SNP 0007.scaffold00024 138071 1 A G - ReadM SNP 0007.scaffold00024 138082 1 C T - ReadM SNP 0007.scaffold00024 138180 1 G C - ReadM SNP 0007.scaffold00024 138200 1 C T - Both SNP 0007.scaffold00024 138239 1 A C scaffold364 ScafM SNP 0007.scaffold00024 138264 1 G T scaffold364 ReadM SNP 0007.scaffold00024 138360 1 T C - ReadM SNP 0007.scaffold00024 138415 1 T C - ReadM SNP 0007.scaffold00024 138421 1 T C - ReadM SNP 0007.scaffold00024 138517 1 A C - ReadM SNP 0007.scaffold00024 138560 1 T A - ReadM SNP 0007.scaffold00024 138660 1 T C - ReadM SNP 0007.scaffold00024 138680 1 T C - ReadM SNP 0007.scaffold00024 138694 1 C T - ReadM SNP 0007.scaffold00024 138955 1 C T - ReadM SNP 0007.scaffold00024 138961 1 C A - ReadM SNP 0007.scaffold00024 139008 1 A G - Both SNP 0007.scaffold00024 139067 1 A T scaffold364 Both SNP 0007.scaffold00024 139069 1 A T scaffold364 Both SNP 0007.scaffold00024 139150 1 C G scaffold364 ScafM INDEL 0007.scaffold00024 139187 3 ... TAC scaffold364 Both SNP 0007.scaffold00024 139267 1 G A scaffold364 Both SNP 0007.scaffold00024 139332 1 T A scaffold364 Both SNP 0007.scaffold00024 139482 1 C G scaffold364 Both SNP 0007.scaffold00024 139599 1 G A scaffold364 Both SNP 0007.scaffold00024 139621 1 T C scaffold364 Both SNP 0007.scaffold00024 139625 1 A G scaffold364 Both SNP 0007.scaffold00024 139708 1 G T scaffold364 Both SNP 0007.scaffold00024 139718 1 G A scaffold364 ScafM SNP 0007.scaffold00024 140998 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 141010 8 ACACAAGT ........ scaffold364 ScafM SNP 0007.scaffold00024 141047 1 G A scaffold364 ScafM SNP 0007.scaffold00024 141055 2 GC AG scaffold364 ScafM SNP 0007.scaffold00024 141071 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 141096 1 . T scaffold364 ScafM SNP 0007.scaffold00024 141101 1 C A scaffold364 ScafM SNP 0007.scaffold00024 141115 1 C T scaffold364 ScafM SNP 0007.scaffold00024 141118 1 A C scaffold364 ScafM SNP 0007.scaffold00024 141122 1 C A scaffold364 ScafM INDEL 0007.scaffold00024 141132 4 .... AAGT scaffold364 ScafM INDEL 0007.scaffold00024 141141 6 ...... CTTCAG scaffold364 ScafM SNP 0007.scaffold00024 141144 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 141149 2 .. AA scaffold364 ScafM SNP 0007.scaffold00024 141159 1 G A scaffold364 ScafM SNP 0007.scaffold00024 141190 1 A G scaffold364 ScafM SNP 0007.scaffold00024 141192 2 AC TG scaffold364 ScafM SNP 0007.scaffold00024 141219 2 CG GA scaffold364 ScafM SNP 0007.scaffold00024 141229 1 G A scaffold364 ScafM SNP 0007.scaffold00024 141252 1 C G scaffold364 ScafM SNP 0007.scaffold00024 141334 1 G A scaffold364 ScafM SNP 0007.scaffold00024 141368 1 C T scaffold364 ScafM SNP 0007.scaffold00024 141392 1 C A scaffold364 ScafM SNP 0007.scaffold00024 141433 1 C T scaffold364 ScafM SNP 0007.scaffold00024 141437 1 A G scaffold364 ScafM SNP 0007.scaffold00024 141443 1 G C scaffold364 ScafM SNP 0007.scaffold00024 141455 1 A G scaffold364 ScafM SNP 0007.scaffold00024 141470 1 C G scaffold364 ScafM SNP 0007.scaffold00024 141486 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 141488 1 . T scaffold364 ScafM SNP 0007.scaffold00024 141492 1 C T scaffold364 ScafM SNP 0007.scaffold00024 141507 1 G T scaffold364 ScafM INDEL 0007.scaffold00024 141510 4 GAGC .... scaffold364 ScafM SNP 0007.scaffold00024 141546 1 G C scaffold364 ScafM SNP 0007.scaffold00024 141557 1 C T scaffold364 Both SNP 0007.scaffold00024 141580 1 T A scaffold364 Both SNP 0007.scaffold00024 141618 1 G A scaffold364 Both SNP 0007.scaffold00024 141696 1 C A scaffold364 ScafM SNP 0007.scaffold00024 141727 1 A T scaffold364 ScafM SNP 0007.scaffold00024 141739 1 C G scaffold364 ScafM SNP 0007.scaffold00024 141829 1 T A scaffold364 ScafM SNP 0007.scaffold00024 141833 1 T A scaffold364 ScafM SNP 0007.scaffold00024 141848 1 C T scaffold364 ScafM SNP 0007.scaffold00024 141874 1 A G scaffold364 ScafM SNP 0007.scaffold00024 141886 1 T C scaffold364 ScafM SNP 0007.scaffold00024 141889 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 141898 2 TA .. scaffold364 ScafM INDEL 0007.scaffold00024 141913 1 . T scaffold364 ScafM SNP 0007.scaffold00024 141929 1 T C scaffold364 ScafM SNP 0007.scaffold00024 141939 2 CT TC scaffold364 ScafM SNP 0007.scaffold00024 141944 1 C A scaffold364 ScafM SNP 0007.scaffold00024 141947 1 A G scaffold364 ScafM SNP 0007.scaffold00024 141949 2 GA CG scaffold364 ScafM SNP 0007.scaffold00024 141961 1 T C scaffold364 ScafM SNP 0007.scaffold00024 141965 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 141988 1 T . scaffold364 ScafM SNP 0007.scaffold00024 142024 1 T G scaffold364 ScafM SNP 0007.scaffold00024 142033 1 C T scaffold364 ScafM SNP 0007.scaffold00024 142039 1 G T scaffold364 ScafM SNP 0007.scaffold00024 142151 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 142160 1 T . scaffold364 ScafM SNP 0007.scaffold00024 142170 1 A G scaffold364 ScafM SNP 0007.scaffold00024 142177 1 C T scaffold364 ScafM SNP 0007.scaffold00024 142185 1 A G scaffold364 ScafM SNP 0007.scaffold00024 142222 1 C A scaffold364 ScafM SNP 0007.scaffold00024 142224 1 T A scaffold364 ScafM SNP 0007.scaffold00024 142226 1 G C scaffold364 ScafM SNP 0007.scaffold00024 142247 1 A G scaffold364 ScafM SNP 0007.scaffold00024 142274 2 AC CT scaffold364 ScafM INDEL 0007.scaffold00024 142325 1 . A scaffold364 ScafM SNP 0007.scaffold00024 142334 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 142372 1 . A scaffold364 ScafM SNP 0007.scaffold00024 142377 2 AA TT scaffold364 ScafM SNP 0007.scaffold00024 142390 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 142393 7 GTTATCA ....... scaffold364 ScafM SNP 0007.scaffold00024 142457 1 A C scaffold364 ScafM SNP 0007.scaffold00024 142461 1 G A scaffold364 ScafM SNP 0007.scaffold00024 142464 1 C G scaffold364 ScafM INDEL 0007.scaffold00024 142483 6 ...... CTAATT scaffold364 ScafM INDEL 0007.scaffold00024 142485 2 .. CT scaffold364 ScafM INDEL 0007.scaffold00024 142494 2 .C AT scaffold364 ScafM SNP 0007.scaffold00024 142511 1 C A scaffold364 ScafM SNP 0007.scaffold00024 142514 1 C T scaffold364 ScafM SNP 0007.scaffold00024 142535 1 A T scaffold364 ScafM SNP 0007.scaffold00024 142580 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 142586 4 .... ATAT scaffold364 Both SNP 0007.scaffold00024 142627 1 C T scaffold364 Both SNP 0007.scaffold00024 142634 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 142695 1 A . scaffold364 ScafM INDEL 0007.scaffold00024 142713 1 A . scaffold364 ScafM INDEL 0007.scaffold00024 142733 1 G . scaffold364 Both SNP 0007.scaffold00024 142769 1 T G scaffold364 Both SNP 0007.scaffold00024 142784 1 C T scaffold364 ScafM INDEL 0007.scaffold00024 142806 3 TAT ... scaffold364 ScafM SNP 0007.scaffold00024 142857 2 AT GC scaffold364 ScafM SNP 0007.scaffold00024 142872 1 T A scaffold364 ReadM SNP 0007.scaffold00024 143061 1 G T - Both SNP 0007.scaffold00024 143338 1 A C scaffold364 ReadM SNP 0007.scaffold00024 143391 1 A T - ReadM SNP 0007.scaffold00024 143450 1 G A - ReadM SNP 0007.scaffold00024 143488 1 A G - ReadM SNP 0007.scaffold00024 143502 1 T C - ReadM INDEL 0007.scaffold00024 143516 1 . T - ReadM SNP 0007.scaffold00024 143577 1 T A - ReadM INDEL 0007.scaffold00024 143678 1 T . - Both SNP 0007.scaffold00024 143760 1 T A scaffold364 ReadM INDEL 0007.scaffold00024 143807 1 . A - ReadM INDEL 0007.scaffold00024 143846 2 .. AA - Both SNP 0007.scaffold00024 143902 1 T C scaffold364 Both SNP 0007.scaffold00024 143925 1 T A scaffold364 Both SNP 0007.scaffold00024 143948 1 C G scaffold364 ScafM SNP 0007.scaffold00024 144030 1 A T scaffold364 Both SNP 0007.scaffold00024 144039 1 G C scaffold364 Both SNP 0007.scaffold00024 144051 1 C A scaffold364 Both SNP 0007.scaffold00024 144120 1 T A scaffold364 ReadM SNP 0007.scaffold00024 144166 1 G A - ReadM SNP 0007.scaffold00024 144181 1 A G - ReadM SNP 0007.scaffold00024 144210 1 G A - ReadM SNP 0007.scaffold00024 144221 1 G A - ReadM SNP 0007.scaffold00024 144245 1 A G - Both SNP 0007.scaffold00024 144423 1 C G scaffold364 Both SNP 0007.scaffold00024 144573 1 C T scaffold364 Both SNP 0007.scaffold00024 144593 1 G A scaffold364 ScafM SNP 0007.scaffold00024 144618 1 T A scaffold364 Both SNP 0007.scaffold00024 144650 1 G A scaffold364 Both SNP 0007.scaffold00024 144660 1 G A scaffold364 Both SNP 0007.scaffold00024 144693 1 G T scaffold364 Both SNP 0007.scaffold00024 144725 1 A G scaffold364 Both SNP 0007.scaffold00024 144776 1 T A scaffold364 Both SNP 0007.scaffold00024 144804 1 A C scaffold364 Both SNP 0007.scaffold00024 144807 1 G T scaffold364 Both SNP 0007.scaffold00024 144826 1 A C scaffold364 Both SNP 0007.scaffold00024 144933 1 A C scaffold364 Both SNP 0007.scaffold00024 144945 1 C T scaffold364 Both SNP 0007.scaffold00024 144982 1 T C scaffold364 Both SNP 0007.scaffold00024 144988 1 T C scaffold364 Both SNP 0007.scaffold00024 145009 1 A T scaffold364 Both SNP 0007.scaffold00024 145088 1 C T scaffold364 Both SNP 0007.scaffold00024 145136 1 T A scaffold364 Both SNP 0007.scaffold00024 145151 1 T C scaffold364 ReadM SNP 0007.scaffold00024 145304 1 A G - Both SNP 0007.scaffold00024 145312 1 G A scaffold364 ScafM SNP 0007.scaffold00024 145339 1 C A scaffold364 ScafM INDEL 0007.scaffold00024 145351 1 . T scaffold364 ScafM SNP 0007.scaffold00024 145359 1 T C scaffold364 ScafM SNP 0007.scaffold00024 145365 1 A T scaffold364 ScafM SNP 0007.scaffold00024 145376 1 C G scaffold364 ScafM SNP 0007.scaffold00024 145395 1 G A scaffold364 Both SNP 0007.scaffold00024 145411 1 G A scaffold364 Both SNP 0007.scaffold00024 145500 1 G A scaffold364 Both SNP 0007.scaffold00024 145525 1 A G scaffold364 ScafM SNP 0007.scaffold00024 145559 1 T A scaffold364 ScafM SNP 0007.scaffold00024 145565 1 A G scaffold364 Both SNP 0007.scaffold00024 145630 1 T C scaffold364 Both SNP 0007.scaffold00024 145642 1 G C scaffold364 Both SNP 0007.scaffold00024 145648 1 G T scaffold364 ReadM INDEL 0007.scaffold00024 145736 2 .. TA - ReadM SNP 0007.scaffold00024 145776 1 C A - ReadM SNP 0007.scaffold00024 145828 1 T G - Both SNP 0007.scaffold00024 145844 1 C G scaffold364 Both SNP 0007.scaffold00024 145885 1 G A scaffold364 Both INDEL 0007.scaffold00024 146012 1 . T scaffold364 ScafM SNP 0007.scaffold00024 146018 1 T G scaffold364 Both SNP 0007.scaffold00024 146089 1 A T scaffold364 ScafM INDEL 0007.scaffold00024 146170 1 T . scaffold364 ScafM SNP 0007.scaffold00024 146174 2 AA TG scaffold364 ScafM INDEL 0007.scaffold00024 146183 1 A . scaffold364 ReadM SNP 0007.scaffold00024 146258 1 G A - ReadM SNP 0007.scaffold00024 146265 1 T G - ReadM SNP 0007.scaffold00024 146298 1 T C - ReadM SNP 0007.scaffold00024 146385 1 T C - ReadM SNP 0007.scaffold00024 146391 1 A C - ReadM SNP 0007.scaffold00024 146424 1 A T - ReadM INDEL 0007.scaffold00024 146510 2 .. AT - Both INDEL 0007.scaffold00024 146591 1 . T scaffold364 Both SNP 0007.scaffold00024 146676 1 G A scaffold364 Both SNP 0007.scaffold00024 146688 1 A T scaffold364 Both SNP 0007.scaffold00024 146778 1 G A scaffold364 Both SNP 0007.scaffold00024 146783 1 A G scaffold364 ReadM SNP 0007.scaffold00024 146827 1 A G - ReadM SNP 0007.scaffold00024 146915 1 T C - ReadM INDEL 0007.scaffold00024 146942 1 T . - ReadM SNP 0007.scaffold00024 146974 1 A G - ReadM SNP 0007.scaffold00024 147045 1 C T - ReadM SNP 0007.scaffold00024 147094 1 T C - Both SNP 0007.scaffold00024 147220 1 T C scaffold364 Both SNP 0007.scaffold00024 147228 1 A C scaffold364 Both SNP 0007.scaffold00024 147367 1 C A scaffold364 Both SNP 0007.scaffold00024 147373 1 C T scaffold364 Both SNP 0007.scaffold00024 147416 1 T C scaffold364 ScafM SNP 0007.scaffold00024 147458 2 CG AT scaffold364 ScafM SNP 0007.scaffold00024 147475 1 G A scaffold364 ScafM SNP 0007.scaffold00024 147479 1 T A scaffold364 Both SNP 0007.scaffold00024 147549 1 A G scaffold364 Both SNP 0007.scaffold00024 147609 1 G T scaffold364 Both INDEL 0007.scaffold00024 147743 1 . T scaffold364 Both INDEL 0007.scaffold00024 147796 1 . G scaffold364 Both SNP 0007.scaffold00024 147801 1 C G scaffold364 Both SNP 0007.scaffold00024 147843 1 C T scaffold364 Both SNP 0007.scaffold00024 147904 1 T C scaffold364 Both SNP 0007.scaffold00024 147985 1 A G scaffold364 Both SNP 0007.scaffold00024 147994 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 148062 4 .... TCGG scaffold364 ReadM SNP 0007.scaffold00024 148249 1 A T - ReadM SNP 0007.scaffold00024 148406 1 G T - ReadM SNP 0007.scaffold00024 148412 1 G A - Both SNP 0007.scaffold00024 148474 1 G A scaffold364 Both SNP 0007.scaffold00024 148491 1 T C scaffold364 Both SNP 0007.scaffold00024 148619 1 T A scaffold364 ReadM INDEL 0007.scaffold00024 148928 1 . T - ReadM SNP 0007.scaffold00024 148960 1 G A - ScafM INDEL 0007.scaffold00024 149074 1 T . scaffold364 ScafM SNP 0007.scaffold00024 149076 1 T C scaffold364 ScafM SNP 0007.scaffold00024 149089 1 G A scaffold364 ScafM SNP 0007.scaffold00024 149100 1 G A scaffold364 ReadM SNP 0007.scaffold00024 149236 1 C T - ReadM SNP 0007.scaffold00024 149299 1 T C - ReadM SNP 0007.scaffold00024 149398 1 A C - ReadM SNP 0007.scaffold00024 149416 1 C T - ReadM SNP 0007.scaffold00024 149426 1 A G - Both SNP 0007.scaffold00024 149546 1 A G scaffold364 Both SNP 0007.scaffold00024 149575 1 A G scaffold364 Both SNP 0007.scaffold00024 149609 1 G A scaffold364 Both SNP 0007.scaffold00024 149636 1 T G scaffold364 Both SNP 0007.scaffold00024 149647 1 A T scaffold364 ReadM SNP 0007.scaffold00024 149680 1 T C - ReadM SNP 0007.scaffold00024 149724 1 G C - ReadM SNP 0007.scaffold00024 149863 1 G A - ReadM SNP 0007.scaffold00024 149871 1 C A - ReadM SNP 0007.scaffold00024 149910 1 C T - ReadM SNP 0007.scaffold00024 149981 1 G A - ReadM SNP 0007.scaffold00024 150000 1 G A - ReadM SNP 0007.scaffold00024 150099 1 T C - ReadM SNP 0007.scaffold00024 150215 1 G A - ReadM SNP 0007.scaffold00024 150218 1 A G - ReadM SNP 0007.scaffold00024 150225 1 A C - ReadM INDEL 0007.scaffold00024 150270 1 G . - ReadM SNP 0007.scaffold00024 150306 1 A C - ReadM SNP 0007.scaffold00024 150356 1 C T - Both SNP 0007.scaffold00024 150399 1 T A scaffold364 Both SNP 0007.scaffold00024 150507 1 G C scaffold364 Both SNP 0007.scaffold00024 150592 1 T C scaffold364 Both SNP 0007.scaffold00024 150674 1 A G scaffold364 Both SNP 0007.scaffold00024 150696 1 A G scaffold364 Both SNP 0007.scaffold00024 150815 1 C T scaffold364 Both SNP 0007.scaffold00024 150878 1 A G scaffold364 ReadM SNP 0007.scaffold00024 150932 1 T C - ReadM INDEL 0007.scaffold00024 150969 1 . A - ReadM SNP 0007.scaffold00024 151196 1 A G - ReadM SNP 0007.scaffold00024 151406 1 T G - ReadM INDEL 0007.scaffold00024 151474 1 A . - Both SNP 0007.scaffold00024 151554 1 T C scaffold364 Both SNP 0007.scaffold00024 151557 1 C T scaffold364 ReadM SNP 0007.scaffold00024 151682 1 G A - ReadM SNP 0007.scaffold00024 151913 1 A G - ReadM SNP 0007.scaffold00024 152518 1 T A - ReadM INDEL 0007.scaffold00024 152743 1 . T - Both SNP 0007.scaffold00024 152765 1 C T scaffold364 ReadM INDEL 0007.scaffold00024 152983 2 .. TT - ReadM SNP 0007.scaffold00024 153078 1 A G - ReadM SNP 0007.scaffold00024 153183 1 T C - ScafM SNP 0007.scaffold00024 153707 1 A G scaffold364 ScafM SNP 0007.scaffold00024 153709 1 C T scaffold364 ScafM SNP 0007.scaffold00024 153754 1 C G scaffold364 ScafM SNP 0007.scaffold00024 153769 1 A G scaffold364 ScafM SNP 0007.scaffold00024 153860 1 G A scaffold364 ScafM SNP 0007.scaffold00024 153884 1 G A scaffold364 ScafM INDEL 0007.scaffold00024 154026 1 . T scaffold364 ScafM SNP 0007.scaffold00024 156279 1 G A scaffold364 ReadM SNP 0007.scaffold00024 156407 1 C T - ReadM SNP 0007.scaffold00024 156484 1 A T - ReadM SNP 0007.scaffold00024 156497 1 T C - ReadM SNP 0007.scaffold00024 156625 1 T C - ReadM SNP 0007.scaffold00024 156832 1 A G - ReadM SNP 0007.scaffold00024 157107 2 AT GG - ReadM SNP 0007.scaffold00024 157127 1 T C - ReadM SNP 0007.scaffold00024 157286 1 T C - ReadM SNP 0007.scaffold00024 157297 1 T C - ReadM SNP 0007.scaffold00024 157340 1 G T - ReadM SNP 0007.scaffold00024 157490 1 C T - ReadM SNP 0007.scaffold00024 157506 1 G T - ReadM SNP 0007.scaffold00024 157534 1 A G - ReadM SNP 0007.scaffold00024 157732 1 G A - ReadM SNP 0007.scaffold00024 157786 1 C A - ReadM SNP 0007.scaffold00024 157999 1 A G - ReadM SNP 0007.scaffold00024 158006 1 T C - ReadM SNP 0007.scaffold00024 158011 1 T G - ReadM SNP 0007.scaffold00024 158070 1 G A - ReadM SNP 0007.scaffold00024 158120 1 C A - ReadM SNP 0007.scaffold00024 158125 1 C T - ReadM SNP 0007.scaffold00024 164382 1 G A - ReadM SNP 0007.scaffold00024 164507 1 A G - ReadM SNP 0007.scaffold00024 166484 1 T G - ReadM SNP 0007.scaffold00024 166497 1 G T - ReadM SNP 0007.scaffold00024 166561 1 A C - ReadM SNP 0007.scaffold00024 166570 1 A G - ReadM SNP 0007.scaffold00024 166611 1 G T - ReadM SNP 0007.scaffold00024 166657 1 C T - ReadM SNP 0007.scaffold00024 166664 1 G A - ReadM SNP 0007.scaffold00024 166918 1 A G - ReadM SNP 0007.scaffold00024 169058 1 A G - ReadM SNP 0007.scaffold00024 169111 1 C A - ReadM SNP 0007.scaffold00024 169353 1 C T - ReadM SNP 0007.scaffold00024 169388 1 A T - ReadM SNP 0007.scaffold00024 169544 1 T C - ReadM SNP 0007.scaffold00024 169729 1 T C - ReadM SNP 0007.scaffold00024 169784 1 G A - ReadM SNP 0007.scaffold00024 169793 1 A G - ReadM SNP 0007.scaffold00024 170023 1 G A - ReadM SNP 0007.scaffold00024 170130 1 G A - ReadM SNP 0007.scaffold00024 170190 1 T C - ReadM SNP 0007.scaffold00024 170232 1 G T - ReadM SNP 0007.scaffold00024 170255 1 T C - ReadM SNP 0007.scaffold00024 170352 1 T C - ReadM SNP 0007.scaffold00024 170361 1 A T - ReadM SNP 0007.scaffold00024 170529 1 G A - ReadM SNP 0007.scaffold00024 170569 1 G T - ReadM SNP 0007.scaffold00024 170596 1 A G - ReadM SNP 0007.scaffold00024 170601 1 C G - ReadM SNP 0007.scaffold00024 170706 1 C A - ReadM SNP 0007.scaffold00024 172493 1 T C - ReadM SNP 0007.scaffold00024 172707 1 A G - ReadM INDEL 0007.scaffold00024 172716 1 T . - ReadM SNP 0007.scaffold00024 172725 1 T G - Both SNP 0007.scaffold00024 172925 1 T A scaffold364 Both SNP 0007.scaffold00024 172936 1 C T scaffold364 Both SNP 0007.scaffold00024 172948 1 G A scaffold364 Both SNP 0007.scaffold00024 172998 1 A G scaffold364 Both INDEL 0007.scaffold00024 173017 2 TT .. scaffold364 Both SNP 0007.scaffold00024 173157 1 G A scaffold364 Both SNP 0007.scaffold00024 173171 1 T G scaffold364 ReadM SNP 0007.scaffold00024 173445 1 C T - ReadM SNP 0007.scaffold00024 173591 1 A G - ReadM SNP 0007.scaffold00024 173628 1 G T - ReadM SNP 0007.scaffold00024 173646 1 G C - ReadM SNP 0007.scaffold00024 173739 1 T C - ReadM SNP 0007.scaffold00024 173769 1 A G - ReadM SNP 0007.scaffold00024 173796 1 T C - ReadM SNP 0007.scaffold00024 173849 1 T C - ReadM SNP 0007.scaffold00024 173852 1 T G - ReadM SNP 0007.scaffold00024 173930 1 T C - Both SNP 0007.scaffold00024 174055 1 T C scaffold364 ReadM SNP 0007.scaffold00024 174154 1 T A - ReadM SNP 0007.scaffold00024 174183 1 A G - ReadM SNP 0007.scaffold00024 174218 1 T C - Both SNP 0007.scaffold00024 174294 1 C A scaffold364 Both SNP 0007.scaffold00024 174324 1 G A scaffold364 Both SNP 0007.scaffold00024 174328 1 C T scaffold364 ScafM SNP 0007.scaffold00024 174384 1 T A scaffold364 ScafM INDEL 0007.scaffold00024 174433 8 ........ CGGATGCA scaffold364 Both SNP 0007.scaffold00024 174524 1 C A scaffold364 ScafM INDEL 0007.scaffold00024 174638 3 ... AGT scaffold364 ScafM SNP 0007.scaffold00024 174660 1 G C scaffold364 ScafM INDEL 0007.scaffold00024 174721 8 TAGTCTAT ........ scaffold364 ReadM SNP 0007.scaffold00024 174833 1 C T - ReadM SNP 0007.scaffold00024 174893 1 C G - ReadM SNP 0007.scaffold00024 174927 1 C A - ReadM SNP 0007.scaffold00024 175016 1 A G - ReadM SNP 0007.scaffold00024 175028 1 C T - ReadM INDEL 0007.scaffold00024 175061 1 A . - ReadM SNP 0007.scaffold00024 175151 1 T C - ReadM SNP 0007.scaffold00024 175192 1 T G - ReadM SNP 0007.scaffold00024 175201 1 A G - ReadM SNP 0007.scaffold00024 175242 1 G C - ReadM INDEL 0007.scaffold00024 175250 1 A . - Both SNP 0007.scaffold00024 175299 1 A C scaffold364 ScafM SNP 0007.scaffold00024 175375 1 T C scaffold364 ScafM INDEL 0007.scaffold00024 175383 45 TAGATATAATTATTACGAAGTAACTATTACTTCTCAACTGAAAGC ............................................. scaffold364 ScafM SNP 0007.scaffold00024 175440 1 A T scaffold364 Both SNP 0007.scaffold00024 175583 1 C A scaffold364 Both SNP 0007.scaffold00024 175595 1 G T scaffold364 ScafM INDEL 0007.scaffold00024 175697 3 AAA ... scaffold364 ScafM SNP 0007.scaffold00024 175703 1 C G scaffold364 ScafM SNP 0007.scaffold00024 175737 1 C T scaffold364 Both SNP 0007.scaffold00024 175749 1 T C scaffold364 Both SNP 0007.scaffold00024 175785 1 T C scaffold364 Both INDEL 0007.scaffold00024 175789 1 . C scaffold364 Both SNP 0007.scaffold00024 175868 1 C G scaffold364 ScafM INDEL 0007.scaffold00024 175941 1 T . scaffold364 Both SNP 0007.scaffold00024 175949 1 T A scaffold364 ReadM INDEL 0007.scaffold00024 175967 1 T . - ReadM SNP 0007.scaffold00024 176052 1 T G - ReadM SNP 0007.scaffold00024 176083 1 G A - ReadM SNP 0007.scaffold00024 176164 1 C T - ReadM SNP 0007.scaffold00024 176176 1 G A - ReadM SNP 0007.scaffold00024 176271 1 T C - ReadM SNP 0007.scaffold00024 176613 1 T A - ReadM SNP 0007.scaffold00024 176901 1 T C - ReadM SNP 0007.scaffold00024 176949 1 C G - ReadM SNP 0007.scaffold00024 177076 1 C T - ReadM SNP 0007.scaffold00024 177087 1 A C - ReadM SNP 0007.scaffold00024 177114 1 G A - ReadM SNP 0007.scaffold00024 177204 1 G A - ReadM SNP 0007.scaffold00024 177222 1 T G - ReadM SNP 0007.scaffold00024 177231 1 G A - ReadM SNP 0007.scaffold00024 177314 1 G A - ReadM SNP 0007.scaffold00024 177351 1 G A - ReadM SNP 0007.scaffold00024 177379 1 C T - ReadM SNP 0007.scaffold00024 177458 1 G A - ReadM SNP 0007.scaffold00024 177504 1 A G - ReadM SNP 0007.scaffold00024 177526 1 T C - ReadM SNP 0007.scaffold00024 177632 1 T G - ReadM INDEL 0007.scaffold00024 177652 1 . T - ReadM SNP 0007.scaffold00024 177673 1 G A - ReadM SNP 0007.scaffold00024 177728 1 T G - ScafM SNP 0007.scaffold00024 180824 1 A C scaffold2787 ScafM SNP 0007.scaffold00024 180833 1 G A scaffold2787 ScafM SNP 0007.scaffold00024 180839 1 A G scaffold2787 ScafM SNP 0007.scaffold00024 180841 1 C T scaffold2787 ScafM SNP 0007.scaffold00024 180845 1 G A scaffold2787 ScafM SNP 0007.scaffold00024 180858 1 G A scaffold2787 ScafM SNP 0007.scaffold00024 180860 1 A G scaffold2787 ScafM SNP 0007.scaffold00024 180877 1 C G scaffold2787 ScafM SNP 0007.scaffold00024 180899 1 T G scaffold2787 ScafM INDEL 0007.scaffold00024 180911 10 .......... ATGAATTTTA scaffold2787 ScafM SNP 0007.scaffold00024 180922 1 G C scaffold2787 ScafM SNP 0007.scaffold00024 180927 1 C A scaffold2787 ScafM SNP 0007.scaffold00024 180960 1 G T scaffold2787 ScafM SNP 0007.scaffold00024 180985 1 G A scaffold2787 ScafM SNP 0007.scaffold00024 181036 1 C T scaffold2787 ScafM INDEL 0007.scaffold00024 181064 1 C . scaffold2787 ScafM SNP 0007.scaffold00024 184465 1 C G scaffold4767 ScafM SNP 0007.scaffold00024 184485 1 C A scaffold4767 ScafM SNP 0007.scaffold00024 184511 1 T C scaffold4767 ScafM SNP 0007.scaffold00024 184608 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184616 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 184640 1 T G scaffold23915 ScafM INDEL 0007.scaffold00024 184654 1 . A scaffold23915 ScafM INDEL 0007.scaffold00024 184660 9 ......... TCATCAATG scaffold23915 ScafM INDEL 0007.scaffold00024 184662 3 ... GGA scaffold23915 ScafM INDEL 0007.scaffold00024 184663 1 . C scaffold23915 ScafM INDEL 0007.scaffold00024 184664 4 .... CAAG scaffold23915 ScafM SNP 0007.scaffold00024 184699 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184704 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 184738 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 184740 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 184748 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 184753 2 .C TA scaffold23915 ScafM SNP 0007.scaffold00024 184773 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 184784 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184794 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184820 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184822 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 184827 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 184858 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 184870 1 T A scaffold23915 ScafM SNP 0007.scaffold00024 184890 1 C A scaffold23915 ScafM INDEL 0007.scaffold00024 184896 3 .CG GAT scaffold23915 ScafM SNP 0007.scaffold00024 184905 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 184912 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 184919 2 GG AT scaffold23915 ScafM SNP 0007.scaffold00024 184945 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 184957 1 G C scaffold23915 ScafM SNP 0007.scaffold00024 185049 1 G A scaffold23915 ScafM INDEL 0007.scaffold00024 185079 1 . G scaffold23915 ScafM SNP 0007.scaffold00024 185105 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 185137 1 G C scaffold23915 ScafM INDEL 0007.scaffold00024 185144 1 . A scaffold23915 ScafM SNP 0007.scaffold00024 185217 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 185219 2 TT AA scaffold23915 ScafM SNP 0007.scaffold00024 185225 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 185233 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 185294 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 185314 1 A G scaffold23915 ScafM INDEL 0007.scaffold00024 185340 1 . T scaffold23915 ScafM SNP 0007.scaffold00024 185363 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 185373 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 185380 1 T C scaffold23915 ScafM INDEL 0007.scaffold00024 185387 1 C . scaffold23915 ScafM INDEL 0007.scaffold00024 185389 2 .G TA scaffold23915 ScafM SNP 0007.scaffold00024 185411 1 G T scaffold23915 ScafM INDEL 0007.scaffold00024 185455 3 GAA ... scaffold23915 ScafM SNP 0007.scaffold00024 185463 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 185472 1 G T scaffold23915 ScafM INDEL 0007.scaffold00024 185479 1 . C scaffold23915 ScafM SNP 0007.scaffold00024 185499 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 185509 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 185523 2 TA AG scaffold23915 ScafM SNP 0007.scaffold00024 185527 1 T A scaffold23915 ScafM SNP 0007.scaffold00024 185537 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 185543 1 A C scaffold23915 ScafM INDEL 0007.scaffold00024 185560 2 .A CG scaffold23915 ScafM SNP 0007.scaffold00024 185571 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 185582 2 AT GC scaffold23915 ScafM SNP 0007.scaffold00024 185606 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 185613 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 185617 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 185629 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 194765 1 G C scaffold3538 ScafM SNP 0007.scaffold00024 194827 1 C G scaffold3538 ScafM INDEL 0007.scaffold00024 194852 2 .. AA scaffold3538 ScafM SNP 0007.scaffold00024 194861 1 G A scaffold3538 ScafM SNP 0007.scaffold00024 194889 1 A G scaffold3538 ScafM INDEL 0007.scaffold00024 194913 4 CACG .... scaffold3538 ScafM SNP 0007.scaffold00024 194949 1 A G scaffold3538 ScafM SNP 0007.scaffold00024 195022 2 GA AG scaffold3538 ScafM SNP 0007.scaffold00024 195060 1 C T scaffold3538 ScafM SNP 0007.scaffold00024 195070 1 A G scaffold3538 ScafM SNP 0007.scaffold00024 195077 1 A G scaffold3538 ScafM SNP 0007.scaffold00024 195084 1 G C scaffold3538 ScafM INDEL 0007.scaffold00024 195101 1 G . scaffold3538 ScafM INDEL 0007.scaffold00024 195139 4 GGAA .... scaffold3538 ScafM SNP 0007.scaffold00024 195145 2 AG GC scaffold3538 ScafM INDEL 0007.scaffold00024 195149 3 CTA ..G scaffold3538 ScafM SNP 0007.scaffold00024 195205 1 T C scaffold3538 ScafM SNP 0007.scaffold00024 195224 2 TT CG scaffold3538 ScafM SNP 0007.scaffold00024 195270 1 T G scaffold3538 ScafM SNP 0007.scaffold00024 195274 1 A G scaffold3538 ScafM SNP 0007.scaffold00024 195279 1 T G scaffold3538 ScafM SNP 0007.scaffold00024 195303 1 A T scaffold3538 ScafM SNP 0007.scaffold00024 211955 1 G A scaffold364 ScafM SNP 0007.scaffold00024 211999 1 C T scaffold364 Both SNP 0007.scaffold00024 212029 1 C T scaffold364 Both SNP 0007.scaffold00024 212046 1 T G scaffold364 Both SNP 0007.scaffold00024 212098 1 G A scaffold364 ScafM SNP 0007.scaffold00024 212171 1 G A scaffold364 ScafM SNP 0007.scaffold00024 212183 2 GG AA scaffold364 ScafM INDEL 0007.scaffold00024 212201 12 ............ TAGGGGTTGTTT scaffold364 ScafM INDEL 0007.scaffold00024 212203 5 ..... GGTGT scaffold364 Both SNP 0007.scaffold00024 212264 1 A G scaffold364 Both SNP 0007.scaffold00024 212275 1 G T scaffold364 Both SNP 0007.scaffold00024 212346 1 A G scaffold364 ReadM SNP 0007.scaffold00024 212420 1 G C - ReadM INDEL 0007.scaffold00024 212427 1 C . - ReadM SNP 0007.scaffold00024 212476 1 T A - ReadM SNP 0007.scaffold00024 212553 1 T C - ReadM SNP 0007.scaffold00024 212609 1 C T - ReadM INDEL 0007.scaffold00024 212623 1 A . - ReadM SNP 0007.scaffold00024 212716 1 T A - Both SNP 0007.scaffold00024 212791 1 A C scaffold364 Both SNP 0007.scaffold00024 212813 1 A T scaffold364 ReadM SNP 0007.scaffold00024 212864 1 C G - ScafM SNP 0007.scaffold00024 213138 1 A G scaffold364 ScafM SNP 0007.scaffold00024 213164 1 C A scaffold364 ScafM SNP 0007.scaffold00024 213174 1 C A scaffold364 ReadM SNP 0007.scaffold00024 219041 1 A G - ReadM SNP 0007.scaffold00024 219085 1 C T - ReadM SNP 0007.scaffold00024 219615 1 G C - ReadM SNP 0007.scaffold00024 220132 1 G C - ReadM SNP 0007.scaffold00024 222223 1 A C - ReadM SNP 0007.scaffold00024 222253 1 G A - ReadM SNP 0007.scaffold00024 223190 1 A C - ReadM SNP 0007.scaffold00024 223212 1 T C - ReadM SNP 0007.scaffold00024 223317 1 T C - ReadM SNP 0007.scaffold00024 224565 1 A G - ReadM SNP 0007.scaffold00024 224606 1 A G - ReadM SNP 0007.scaffold00024 225063 1 C T - ReadM SNP 0007.scaffold00024 225466 1 T G - ScafM SNP 0007.scaffold00024 225930 1 G A scaffold960 Both SNP 0007.scaffold00024 225940 1 G A scaffold960 Both SNP 0007.scaffold00024 226003 1 T C scaffold960 ScafM SNP 0007.scaffold00024 226036 1 C A scaffold960 ScafM SNP 0007.scaffold00024 226054 1 A T scaffold960 ScafM SNP 0007.scaffold00024 226061 1 T C scaffold960 ScafM SNP 0007.scaffold00024 226067 1 A G scaffold960 ScafM INDEL 0007.scaffold00024 226097 1 G . scaffold960 ScafM SNP 0007.scaffold00024 226111 1 G A scaffold960 Both SNP 0007.scaffold00024 226147 1 T C scaffold960 Both SNP 0007.scaffold00024 226192 1 C T scaffold960 Both SNP 0007.scaffold00024 226264 1 C T scaffold960 ScafM SNP 0007.scaffold00024 226303 1 A G scaffold960 ScafM INDEL 0007.scaffold00024 226435 3 ... TAT scaffold960 ReadM SNP 0007.scaffold00024 226465 1 A G - ReadM SNP 0007.scaffold00024 226468 1 A C - ReadM SNP 0007.scaffold00024 226490 1 G C - Both SNP 0007.scaffold00024 226620 1 C T scaffold960 Both INDEL 0007.scaffold00024 226641 2 GT .. scaffold960 Both SNP 0007.scaffold00024 226726 1 C T scaffold960 Both SNP 0007.scaffold00024 226817 1 A G scaffold960 ReadM SNP 0007.scaffold00024 226842 1 C T - ReadM SNP 0007.scaffold00024 226897 1 G T - ReadM SNP 0007.scaffold00024 226982 1 A G - ReadM SNP 0007.scaffold00024 227078 1 C T - ReadM SNP 0007.scaffold00024 227116 1 G A - Both INDEL 0007.scaffold00024 227241 2 AT .. scaffold960 Both SNP 0007.scaffold00024 227258 1 G A scaffold960 Both SNP 0007.scaffold00024 227619 1 G A scaffold960 ScafM INDEL 0007.scaffold00024 227828 1 . A scaffold960 Both SNP 0007.scaffold00024 227963 1 T C scaffold960 Both SNP 0007.scaffold00024 227974 1 G A scaffold960 Both INDEL 0007.scaffold00024 227985 1 . A scaffold960 Both SNP 0007.scaffold00024 228055 1 G A scaffold960 Both SNP 0007.scaffold00024 228088 1 A T scaffold960 Both SNP 0007.scaffold00024 228180 1 A G scaffold960 Both SNP 0007.scaffold00024 228200 1 C T scaffold960 Both SNP 0007.scaffold00024 228396 1 C T scaffold960 Both SNP 0007.scaffold00024 228489 1 A G scaffold960 ScafM SNP 0007.scaffold00024 228834 1 A T scaffold960 Both SNP 0007.scaffold00024 228885 1 C T scaffold960 Both SNP 0007.scaffold00024 228992 1 C A scaffold960 ReadM SNP 0007.scaffold00024 229004 1 A G - Both SNP 0007.scaffold00024 229722 1 A C scaffold960 ScafM INDEL 0007.scaffold00024 229743 2 .. AA scaffold960 Both SNP 0007.scaffold00024 229799 1 C T scaffold960 Both SNP 0007.scaffold00024 229867 2 CC TT scaffold960 ReadM SNP 0007.scaffold00024 230085 1 G C - Both SNP 0007.scaffold00024 230111 1 A G scaffold960 Both SNP 0007.scaffold00024 230119 1 A G scaffold960 Both SNP 0007.scaffold00024 230165 1 C G scaffold960 Both SNP 0007.scaffold00024 230283 1 C T scaffold960 Both SNP 0007.scaffold00024 230352 1 C A scaffold960 ReadM SNP 0007.scaffold00024 230656 1 T G - ReadM SNP 0007.scaffold00024 230668 1 A T - ReadM SNP 0007.scaffold00024 230822 1 C T - Both SNP 0007.scaffold00024 230881 1 C T scaffold960 Both SNP 0007.scaffold00024 231179 1 G A scaffold960 Both SNP 0007.scaffold00024 231203 1 C T scaffold960 Both SNP 0007.scaffold00024 231267 1 C A scaffold960 ScafM SNP 0007.scaffold00024 231294 1 C T scaffold960 ScafM INDEL 0007.scaffold00024 231301 3 ATG ... scaffold960 Both SNP 0007.scaffold00024 231421 1 C T scaffold960 ScafM INDEL 0007.scaffold00024 231474 2 .. AA scaffold960 ScafM SNP 0007.scaffold00024 231476 1 T A scaffold960 Both INDEL 0007.scaffold00024 231514 1 . A scaffold960 Both SNP 0007.scaffold00024 231569 1 C T scaffold960 Both SNP 0007.scaffold00024 231723 1 T C scaffold960 Both SNP 0007.scaffold00024 232012 1 T C scaffold960 Both SNP 0007.scaffold00024 232105 1 A G scaffold960 Both SNP 0007.scaffold00024 232110 1 C A scaffold960 Both INDEL 0007.scaffold00024 232241 1 T . scaffold960 Both SNP 0007.scaffold00024 232283 1 C T scaffold960 Both SNP 0007.scaffold00024 232338 1 T C scaffold960 Both SNP 0007.scaffold00024 232355 1 A C scaffold960 Both SNP 0007.scaffold00024 232405 1 C T scaffold960 Both SNP 0007.scaffold00024 232452 1 A C scaffold960 Both SNP 0007.scaffold00024 232503 1 C G scaffold960 Both SNP 0007.scaffold00024 232883 1 A C scaffold960 ReadM SNP 0007.scaffold00024 233063 1 A T - ReadM SNP 0007.scaffold00024 233105 1 A G - Both SNP 0007.scaffold00024 233299 1 C T scaffold960 Both SNP 0007.scaffold00024 233375 1 G A scaffold960 Both SNP 0007.scaffold00024 233430 1 C A scaffold960 Both SNP 0007.scaffold00024 233478 1 A G scaffold960 Both SNP 0007.scaffold00024 233550 1 T C scaffold960 Both SNP 0007.scaffold00024 233727 1 T G scaffold960 Both SNP 0007.scaffold00024 233811 1 T C scaffold960 Both SNP 0007.scaffold00024 233815 1 T C scaffold960 Both SNP 0007.scaffold00024 233850 1 G A scaffold960 Both SNP 0007.scaffold00024 233865 1 A T scaffold960 ScafM SNP 0007.scaffold00024 234026 2 GT AG scaffold960 Both SNP 0007.scaffold00024 234037 1 C A scaffold960 ScafM INDEL 0007.scaffold00024 234059 3 CAG ... scaffold960 ReadM SNP 0007.scaffold00024 234127 1 G A - ReadM SNP 0007.scaffold00024 234154 1 G A - ReadM SNP 0007.scaffold00024 234183 1 T C - ScafM SNP 0007.scaffold00024 234219 1 G A scaffold960 Both SNP 0007.scaffold00024 234245 1 C G scaffold960 ScafM SNP 0007.scaffold00024 234263 1 A G scaffold960 ScafM SNP 0007.scaffold00024 234266 1 C T scaffold960 ScafM SNP 0007.scaffold00024 234526 1 G A scaffold960 ScafM INDEL 0007.scaffold00024 234531 16 TAGTGTTGTTGAGGCT ................ scaffold960 ScafM SNP 0007.scaffold00024 234558 1 C T scaffold960 ScafM SNP 0007.scaffold00024 234561 1 T A scaffold960 ScafM INDEL 0007.scaffold00024 234600 2 .G TT scaffold960 ScafM SNP 0007.scaffold00024 234625 1 T G scaffold960 ScafM INDEL 0007.scaffold00024 234727 1 . G scaffold960 ScafM SNP 0007.scaffold00024 234749 1 A T scaffold960 ScafM SNP 0007.scaffold00024 234756 1 C A scaffold960 ScafM SNP 0007.scaffold00024 234760 1 C G scaffold960 ScafM SNP 0007.scaffold00024 234768 1 C A scaffold960 ScafM SNP 0007.scaffold00024 234770 1 C T scaffold960 ScafM SNP 0007.scaffold00024 235122 1 G T scaffold960 ScafM INDEL 0007.scaffold00024 235129 1 . C scaffold960 ScafM SNP 0007.scaffold00024 235142 1 A G scaffold960 ScafM SNP 0007.scaffold00024 235157 1 G A scaffold960 ScafM SNP 0007.scaffold00024 235223 1 G A scaffold960 ScafM SNP 0007.scaffold00024 235254 1 G A scaffold960 ScafM SNP 0007.scaffold00024 235268 1 G A scaffold960 ScafM SNP 0007.scaffold00024 235273 1 T G scaffold960 ScafM SNP 0007.scaffold00024 235278 1 A T scaffold960 ScafM SNP 0007.scaffold00024 235289 1 C T scaffold960 ScafM SNP 0007.scaffold00024 235324 2 TT AA scaffold960 ScafM SNP 0007.scaffold00024 235328 1 A T scaffold960 Both SNP 0007.scaffold00024 235715 1 C A scaffold960 ScafM SNP 0007.scaffold00024 235733 1 A G scaffold960 ScafM SNP 0007.scaffold00024 235745 1 T C scaffold960 ScafM SNP 0007.scaffold00024 235748 1 G T scaffold960 ScafM SNP 0007.scaffold00024 235753 1 G A scaffold960 ScafM SNP 0007.scaffold00024 235792 1 C G scaffold960 ScafM SNP 0007.scaffold00024 235795 1 A G scaffold960 ScafM SNP 0007.scaffold00024 235804 1 C T scaffold960 ScafM SNP 0007.scaffold00024 236290 1 G C scaffold960 ScafM SNP 0007.scaffold00024 237010 1 A G scaffold960 ScafM SNP 0007.scaffold00024 237019 1 C A scaffold960 ScafM SNP 0007.scaffold00024 237058 1 A G scaffold960 ScafM SNP 0007.scaffold00024 237066 1 C T scaffold960 ScafM INDEL 0007.scaffold00024 237083 4 .... GCAC scaffold960 ScafM SNP 0007.scaffold00024 237128 1 A T scaffold960 ScafM SNP 0007.scaffold00024 237136 1 T C scaffold960 ScafM SNP 0007.scaffold00024 237142 1 C T scaffold960 ScafM SNP 0007.scaffold00024 237144 1 A G scaffold960 ScafM SNP 0007.scaffold00024 237168 1 A G scaffold960 ScafM INDEL 0007.scaffold00024 237190 1 . T scaffold960 ScafM SNP 0007.scaffold00024 237209 1 G T scaffold960 ScafM INDEL 0007.scaffold00024 237228 1 T . scaffold960 ScafM SNP 0007.scaffold00024 237299 1 C T scaffold960 ScafM INDEL 0007.scaffold00024 237384 2 CC .T scaffold960 ScafM INDEL 0007.scaffold00024 237398 1 A . scaffold960 ScafM SNP 0007.scaffold00024 242332 1 T A scaffold960 ScafM SNP 0007.scaffold00024 242334 1 C T scaffold960 ScafM SNP 0007.scaffold00024 242343 1 A G scaffold960 ScafM SNP 0007.scaffold00024 242380 1 A C scaffold960 ScafM INDEL 0007.scaffold00024 242408 1 . A scaffold960 ScafM SNP 0007.scaffold00024 242479 1 T A scaffold960 ReadM SNP 0007.scaffold00024 243090 1 T G - ReadM SNP 0007.scaffold00024 243126 1 G A - ReadM SNP 0007.scaffold00024 243211 1 A G - ScafM SNP 0007.scaffold00024 248728 1 A T scaffold960 ScafM SNP 0007.scaffold00024 248769 1 G A scaffold960 ScafM SNP 0007.scaffold00024 248783 1 C T scaffold960 ScafM SNP 0007.scaffold00024 248789 1 A G scaffold960 Both SNP 0007.scaffold00024 248891 1 C T scaffold960 Both SNP 0007.scaffold00024 248902 1 T C scaffold960 Both SNP 0007.scaffold00024 248920 1 G A scaffold960 ScafM SNP 0007.scaffold00024 248972 1 T C scaffold960 ScafM SNP 0007.scaffold00024 249018 1 C T scaffold960 ScafM SNP 0007.scaffold00024 249024 1 C T scaffold960 ScafM INDEL 0007.scaffold00024 249031 3 ... CCA scaffold960 ScafM SNP 0007.scaffold00024 249038 1 A C scaffold960 ScafM SNP 0007.scaffold00024 249041 1 A G scaffold960 ScafM SNP 0007.scaffold00024 249044 1 A C scaffold960 ScafM SNP 0007.scaffold00024 249060 1 T C scaffold960 ScafM SNP 0007.scaffold00024 249073 1 T G scaffold960 ScafM SNP 0007.scaffold00024 249085 1 G C scaffold960 ScafM SNP 0007.scaffold00024 249092 1 G A scaffold960 ScafM INDEL 0007.scaffold00024 249126 5 ..... ATATA scaffold960 ScafM SNP 0007.scaffold00024 249154 1 T C scaffold960 ScafM SNP 0007.scaffold00024 249156 1 T C scaffold960 ScafM SNP 0007.scaffold00024 249158 1 C T scaffold960 ScafM SNP 0007.scaffold00024 249162 1 T C scaffold960 ScafM SNP 0007.scaffold00024 249175 1 T G scaffold960 ScafM SNP 0007.scaffold00024 249184 1 A T scaffold960 ReadM SNP 0007.scaffold00024 249261 1 A G - ReadM SNP 0007.scaffold00024 249275 1 A G - ReadM SNP 0007.scaffold00024 249325 1 T G - ReadM SNP 0007.scaffold00024 249395 1 T C - ReadM SNP 0007.scaffold00024 249441 1 A T - ReadM SNP 0007.scaffold00024 249469 1 A G - ReadM SNP 0007.scaffold00024 249492 1 C A - ReadM SNP 0007.scaffold00024 249664 1 A G - ScafM SNP 0007.scaffold00024 249840 1 A G scaffold960 Both SNP 0007.scaffold00024 249863 1 G A scaffold960 ScafM INDEL 0007.scaffold00024 249883 1 . T scaffold960 Both SNP 0007.scaffold00024 249897 1 G A scaffold960 Both SNP 0007.scaffold00024 249911 1 C A scaffold960 Both SNP 0007.scaffold00024 250038 1 T A scaffold960 Both SNP 0007.scaffold00024 250053 1 T A scaffold960 Both SNP 0007.scaffold00024 250084 1 G T scaffold960 Both SNP 0007.scaffold00024 250110 1 G C scaffold960 Both SNP 0007.scaffold00024 250123 1 C A scaffold960 Both SNP 0007.scaffold00024 250168 1 A G scaffold960 ScafM SNP 0007.scaffold00024 250213 1 T C scaffold960 ScafM SNP 0007.scaffold00024 250225 1 T G scaffold960 ScafM SNP 0007.scaffold00024 250234 1 A G scaffold960 ScafM SNP 0007.scaffold00024 250258 1 A C scaffold960 ScafM SNP 0007.scaffold00024 250282 1 A G scaffold960 ScafM SNP 0007.scaffold00024 250321 1 A G scaffold960 ScafM SNP 0007.scaffold00024 250334 1 C T scaffold960 ScafM SNP 0007.scaffold00024 250338 1 A G scaffold960 ScafM SNP 0007.scaffold00024 250344 2 GA CG scaffold960 ScafM SNP 0007.scaffold00024 250348 1 T C scaffold960 ScafM SNP 0007.scaffold00024 250377 1 C T scaffold960 ScafM SNP 0007.scaffold00024 250424 2 AG TA scaffold960 ScafM SNP 0007.scaffold00024 250473 1 T G scaffold960 ScafM SNP 0007.scaffold00024 253613 1 G A scaffold5073 Both INDEL 0007.scaffold00024 253710 1 G . scaffold5073 Both SNP 0007.scaffold00024 253767 1 C T scaffold5073 ScafM SNP 0007.scaffold00024 264933 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 264958 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 264973 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 265000 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 265045 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 265055 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 265117 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 265142 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 265210 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 265224 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 265312 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 265324 1 A . scaffold12658 Both SNP 0007.scaffold00024 265515 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 266400 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 266447 2 AT .. scaffold12658 ScafM SNP 0007.scaffold00024 266489 1 T C scaffold12658 Both INDEL 0007.scaffold00024 266867 2 AG .. scaffold12658 Both SNP 0007.scaffold00024 266940 1 A C scaffold12658 Both SNP 0007.scaffold00024 266972 1 T C scaffold12658 Both INDEL 0007.scaffold00024 267050 2 .. TA scaffold12658 Both SNP 0007.scaffold00024 267070 1 A G scaffold12658 Both SNP 0007.scaffold00024 267186 1 A G scaffold12658 Both INDEL 0007.scaffold00024 267197 1 . A scaffold12658 Both SNP 0007.scaffold00024 267316 1 C A scaffold12658 Both SNP 0007.scaffold00024 267329 1 C T scaffold12658 Both SNP 0007.scaffold00024 267421 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 267619 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 267645 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 267661 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 267712 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 267743 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 267921 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 268023 1 C A scaffold4558 ScafM INDEL 0007.scaffold00024 268072 1 T . scaffold4558 ScafM INDEL 0007.scaffold00024 268162 1 T . scaffold4558 ScafM SNP 0007.scaffold00024 268184 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 268220 2 CT AG scaffold4558 ScafM SNP 0007.scaffold00024 268224 1 G T scaffold4558 ScafM SNP 0007.scaffold00024 268274 2 AT CC scaffold4558 ScafM SNP 0007.scaffold00024 268292 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 268318 1 T A scaffold4558 ScafM SNP 0007.scaffold00024 268348 2 CA AT scaffold4558 ScafM SNP 0007.scaffold00024 268353 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 268358 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 268377 1 G C scaffold4558 ScafM INDEL 0007.scaffold00024 268435 1 . A scaffold4558 ScafM SNP 0007.scaffold00024 268455 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 268512 1 C G scaffold4558 ScafM SNP 0007.scaffold00024 268530 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 268552 1 A C scaffold4558 ScafM SNP 0007.scaffold00024 268565 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 268586 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 268588 1 T A scaffold4558 ScafM SNP 0007.scaffold00024 268638 1 T A scaffold4558 ScafM SNP 0007.scaffold00024 268676 1 G T scaffold4558 ScafM SNP 0007.scaffold00024 268678 1 G C scaffold4558 ScafM SNP 0007.scaffold00024 268705 1 A G scaffold4558 ScafM SNP 0007.scaffold00024 268728 1 T G scaffold4558 ScafM INDEL 0007.scaffold00024 268733 1 G . scaffold4558 ScafM SNP 0007.scaffold00024 268747 1 A T scaffold4558 ScafM SNP 0007.scaffold00024 268815 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 268840 1 A T scaffold4558 ScafM SNP 0007.scaffold00024 268846 1 G T scaffold4558 ScafM SNP 0007.scaffold00024 268853 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 268863 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 268865 1 T A scaffold4558 ScafM SNP 0007.scaffold00024 268880 1 A G scaffold4558 ScafM SNP 0007.scaffold00024 268893 1 C A scaffold4558 ScafM SNP 0007.scaffold00024 268895 1 T A scaffold4558 ScafM INDEL 0007.scaffold00024 268899 1 A . scaffold4558 ScafM SNP 0007.scaffold00024 268914 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 268916 1 A G scaffold4558 ScafM SNP 0007.scaffold00024 268921 1 G C scaffold4558 ScafM INDEL 0007.scaffold00024 268942 1 C . scaffold4558 ScafM SNP 0007.scaffold00024 268949 1 G C scaffold4558 ScafM SNP 0007.scaffold00024 269000 1 C T scaffold4558 ScafM INDEL 0007.scaffold00024 269015 1 . C scaffold4558 ScafM SNP 0007.scaffold00024 269020 1 T A scaffold4558 ScafM SNP 0007.scaffold00024 269038 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 269065 2 CG TA scaffold4558 ScafM SNP 0007.scaffold00024 269096 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 269108 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 269236 1 T G scaffold4558 ScafM SNP 0007.scaffold00024 269245 1 C A scaffold4558 ScafM INDEL 0007.scaffold00024 269257 1 A . scaffold4558 ScafM SNP 0007.scaffold00024 269542 1 C G scaffold9324 ScafM SNP 0007.scaffold00024 269551 1 T C scaffold9324 ScafM SNP 0007.scaffold00024 269575 2 AA TT scaffold9324 ScafM SNP 0007.scaffold00024 269605 1 G A scaffold9324 ScafM SNP 0007.scaffold00024 269629 1 T C scaffold9324 ScafM SNP 0007.scaffold00024 269641 1 A G scaffold9324 ScafM SNP 0007.scaffold00024 269644 1 T C scaffold9324 ScafM SNP 0007.scaffold00024 269688 1 A G scaffold9324 ScafM SNP 0007.scaffold00024 269691 1 T A scaffold9324 ScafM SNP 0007.scaffold00024 269794 1 C G scaffold4558 ScafM SNP 0007.scaffold00024 269809 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 269840 1 C A scaffold4558 ScafM SNP 0007.scaffold00024 269863 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 269889 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 269919 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 269936 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 269953 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 269958 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 270005 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 270018 1 A G scaffold4558 ScafM SNP 0007.scaffold00024 270035 1 A G scaffold4558 ScafM SNP 0007.scaffold00024 270052 1 T G scaffold4558 ScafM SNP 0007.scaffold00024 270058 1 G A scaffold4558 ScafM SNP 0007.scaffold00024 270123 1 T C scaffold4558 ScafM SNP 0007.scaffold00024 270593 1 T G scaffold4558 ScafM SNP 0007.scaffold00024 270619 1 G T scaffold4558 ScafM SNP 0007.scaffold00024 270697 1 C T scaffold4558 ScafM SNP 0007.scaffold00024 274845 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 274878 1 A C scaffold12658 Both SNP 0007.scaffold00024 275183 1 C T scaffold12658 Both SNP 0007.scaffold00024 275202 1 A G scaffold12658 Both SNP 0007.scaffold00024 275223 1 G C scaffold12658 Both SNP 0007.scaffold00024 275650 1 A T scaffold12658 ReadM SNP 0007.scaffold00024 275750 1 C T - Both SNP 0007.scaffold00024 276186 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 276216 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 276255 1 T A scaffold12658 Both SNP 0007.scaffold00024 276269 1 G T scaffold12658 Both SNP 0007.scaffold00024 276313 1 T C scaffold12658 Both INDEL 0007.scaffold00024 276377 2 .. TT scaffold12658 ScafM SNP 0007.scaffold00024 276606 1 G A scaffold12658 Both SNP 0007.scaffold00024 276662 1 A T scaffold12658 Both SNP 0007.scaffold00024 276682 1 G A scaffold12658 Both SNP 0007.scaffold00024 276823 1 G A scaffold12658 Both SNP 0007.scaffold00024 276825 1 T A scaffold12658 Both SNP 0007.scaffold00024 276899 1 A C scaffold12658 Both SNP 0007.scaffold00024 276919 1 T G scaffold12658 Both SNP 0007.scaffold00024 277155 1 A T scaffold12658 Both SNP 0007.scaffold00024 277194 1 C A scaffold12658 Both SNP 0007.scaffold00024 277220 1 G C scaffold12658 Both SNP 0007.scaffold00024 277425 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 277455 7 ACTCAAC ....... scaffold12658 Both SNP 0007.scaffold00024 277781 1 T G scaffold12658 Both SNP 0007.scaffold00024 277837 1 G A scaffold12658 Both SNP 0007.scaffold00024 277969 1 T G scaffold12658 Both SNP 0007.scaffold00024 278002 1 C T scaffold12658 Both SNP 0007.scaffold00024 278186 1 G A scaffold12658 Both SNP 0007.scaffold00024 278236 1 T C scaffold12658 Both SNP 0007.scaffold00024 278289 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 278294 1 A G scaffold12658 Both SNP 0007.scaffold00024 278318 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 278361 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 278403 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 278435 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 278601 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 278687 1 A C scaffold12658 Both SNP 0007.scaffold00024 278697 1 G T scaffold12658 Both INDEL 0007.scaffold00024 278728 1 T . scaffold12658 ScafM SNP 0007.scaffold00024 279074 1 A C scaffold12658 Both SNP 0007.scaffold00024 279250 1 C T scaffold12658 Both SNP 0007.scaffold00024 279309 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 279412 2 GC AT scaffold12658 ScafM SNP 0007.scaffold00024 279440 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 279449 1 C A scaffold12658 Both SNP 0007.scaffold00024 279478 1 T C scaffold12658 Both SNP 0007.scaffold00024 279578 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 279690 1 T A - ReadM SNP 0007.scaffold00024 279704 1 T C - ScafM SNP 0007.scaffold00024 279909 2 TC GA scaffold12658 Both INDEL 0007.scaffold00024 279955 2 .. AG scaffold12658 Both SNP 0007.scaffold00024 279999 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 280055 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 280060 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 280064 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 280081 1 T C scaffold12658 Both SNP 0007.scaffold00024 280125 1 A C scaffold12658 Both SNP 0007.scaffold00024 280153 1 A T scaffold12658 Both SNP 0007.scaffold00024 280203 1 A C scaffold12658 Both SNP 0007.scaffold00024 280208 1 T A scaffold12658 Both SNP 0007.scaffold00024 280240 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 280300 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 280303 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 280306 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 280332 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 280355 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 280389 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 280392 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 280415 2 AT GG scaffold12658 ScafM SNP 0007.scaffold00024 280438 2 AA GG scaffold12658 ScafM SNP 0007.scaffold00024 280457 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 280479 15 ............... GTGGGCCACCACTCC scaffold12658 Both SNP 0007.scaffold00024 280511 1 A G scaffold12658 Both SNP 0007.scaffold00024 280581 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 280593 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 280602 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 280613 2 AG TA scaffold12658 ScafM SNP 0007.scaffold00024 280638 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 280642 1 A G scaffold12658 Both SNP 0007.scaffold00024 280665 1 T C scaffold12658 Both SNP 0007.scaffold00024 280703 1 T C scaffold12658 Both SNP 0007.scaffold00024 280708 1 T G scaffold12658 Both SNP 0007.scaffold00024 280767 1 T C scaffold12658 Both SNP 0007.scaffold00024 280803 1 A T scaffold12658 Both SNP 0007.scaffold00024 280852 1 G T scaffold12658 Both SNP 0007.scaffold00024 280935 1 T C scaffold12658 Both INDEL 0007.scaffold00024 280956 1 . A scaffold12658 Both SNP 0007.scaffold00024 281033 1 T C scaffold12658 ReadM INDEL 0007.scaffold00024 281133 1 . A - ReadM SNP 0007.scaffold00024 281193 1 G A - ScafM SNP 0007.scaffold00024 281395 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 281422 2 GC AT scaffold12658 ScafM SNP 0007.scaffold00024 281426 1 T A scaffold12658 ReadM SNP 0007.scaffold00024 281499 1 A G - ReadM SNP 0007.scaffold00024 281528 1 C T - Both SNP 0007.scaffold00024 281570 1 C A scaffold12658 Both INDEL 0007.scaffold00024 281640 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 281676 2 CA GT scaffold12658 Both SNP 0007.scaffold00024 281717 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 281748 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 281757 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 281786 1 A . scaffold12658 ScafM SNP 0007.scaffold00024 281795 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 281808 1 G T scaffold12658 Both SNP 0007.scaffold00024 281823 1 T G scaffold12658 Both SNP 0007.scaffold00024 281866 1 A G scaffold12658 Both SNP 0007.scaffold00024 282052 1 C T scaffold12658 Both SNP 0007.scaffold00024 282158 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 282289 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 282382 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 282415 2 CG TA scaffold12658 ScafM INDEL 0007.scaffold00024 282458 35 ................................... TTTTTTTTTGAGTTGAATCGATTTAGGTATGCAAA scaffold12658 ScafM SNP 0007.scaffold00024 282530 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 283275 1 G T scaffold12658 Both SNP 0007.scaffold00024 283397 1 G A scaffold12658 Both SNP 0007.scaffold00024 283415 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 283463 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 283659 1 T A - ReadM SNP 0007.scaffold00024 284009 1 T C - ReadM SNP 0007.scaffold00024 284090 1 T C - ReadM SNP 0007.scaffold00024 284097 1 C T - ReadM SNP 0007.scaffold00024 284121 1 A G - ReadM SNP 0007.scaffold00024 284769 1 G A - ReadM SNP 0007.scaffold00024 284818 1 C T - ScafM SNP 0007.scaffold00024 286489 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 286491 1 T A scaffold12658 ReadM SNP 0007.scaffold00024 286566 1 T C - ReadM SNP 0007.scaffold00024 286655 1 C T - ReadM SNP 0007.scaffold00024 286717 1 T G - ReadM SNP 0007.scaffold00024 286795 1 T C - ReadM SNP 0007.scaffold00024 286858 1 C T - ReadM SNP 0007.scaffold00024 286918 1 T A - Both SNP 0007.scaffold00024 286960 1 T C scaffold12658 Both SNP 0007.scaffold00024 286962 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 287065 1 T C - ReadM SNP 0007.scaffold00024 287658 1 G A - ReadM SNP 0007.scaffold00024 287677 1 C T - ReadM SNP 0007.scaffold00024 287851 1 C T - ReadM SNP 0007.scaffold00024 287892 1 G A - ReadM SNP 0007.scaffold00024 288022 1 C A - ReadM SNP 0007.scaffold00024 288080 1 A G - ReadM INDEL 0007.scaffold00024 288128 1 . T - ReadM SNP 0007.scaffold00024 288149 1 A C - ReadM SNP 0007.scaffold00024 288202 1 G A - ReadM SNP 0007.scaffold00024 288309 1 G A - ReadM SNP 0007.scaffold00024 288324 1 T C - ReadM SNP 0007.scaffold00024 288529 1 G C - ReadM SNP 0007.scaffold00024 288583 1 T G - ReadM SNP 0007.scaffold00024 288599 1 T C - ReadM SNP 0007.scaffold00024 288620 1 G A - ReadM SNP 0007.scaffold00024 288823 1 G A - ReadM SNP 0007.scaffold00024 288895 1 C T - ReadM INDEL 0007.scaffold00024 288957 2 .. TT - ScafM INDEL 0007.scaffold00024 289690 1 A . scaffold12658 ReadM SNP 0007.scaffold00024 290183 1 A G - ReadM SNP 0007.scaffold00024 290270 1 C T - ReadM SNP 0007.scaffold00024 290279 1 A G - ReadM SNP 0007.scaffold00024 290500 1 C T - ReadM SNP 0007.scaffold00024 290529 1 A T - ReadM SNP 0007.scaffold00024 290704 1 T C - ReadM SNP 0007.scaffold00024 290730 1 C T - ReadM SNP 0007.scaffold00024 290763 1 G A - ReadM SNP 0007.scaffold00024 290813 1 G T - ReadM SNP 0007.scaffold00024 290886 1 A T - ReadM SNP 0007.scaffold00024 290937 1 C T - ReadM SNP 0007.scaffold00024 290943 1 T A - ReadM SNP 0007.scaffold00024 290950 1 G A - ReadM SNP 0007.scaffold00024 291086 1 A G - ReadM SNP 0007.scaffold00024 291168 1 G A - ScafM INDEL 0007.scaffold00024 291428 3 TTT ... scaffold12658 ScafM SNP 0007.scaffold00024 291553 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 291576 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 291602 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 291641 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 291703 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 291741 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 291748 2 CA TG scaffold12658 ScafM SNP 0007.scaffold00024 291765 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 291774 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 291822 2 TC CT scaffold12658 ScafM SNP 0007.scaffold00024 291834 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 291974 3 ... ACA scaffold12658 ScafM SNP 0007.scaffold00024 291977 3 GGT TTA scaffold12658 ScafM SNP 0007.scaffold00024 291985 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 292038 2 CG TA scaffold12658 ScafM INDEL 0007.scaffold00024 292119 1 . T scaffold12658 ScafM INDEL 0007.scaffold00024 292121 1 . G scaffold12658 ScafM INDEL 0007.scaffold00024 292143 3 ... GTG scaffold12658 ScafM INDEL 0007.scaffold00024 292162 1 G . scaffold12658 ScafM SNP 0007.scaffold00024 292768 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 292813 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 292972 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 293081 1 T . scaffold12658 ScafM INDEL 0007.scaffold00024 293088 7 CCCCCCC ....... scaffold12658 ScafM SNP 0007.scaffold00024 293205 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 293213 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 293286 1 C T - ReadM SNP 0007.scaffold00024 293383 1 A G - ReadM SNP 0007.scaffold00024 293432 1 T C - ReadM SNP 0007.scaffold00024 293435 1 T G - Both INDEL 0007.scaffold00024 293660 1 A . scaffold12658 ScafM SNP 0007.scaffold00024 293662 1 A G scaffold12658 Both SNP 0007.scaffold00024 293700 1 T C scaffold12658 Both SNP 0007.scaffold00024 293782 1 C A scaffold12658 Both INDEL 0007.scaffold00024 294016 1 . A scaffold12658 Both SNP 0007.scaffold00024 294072 1 G A scaffold12658 Both SNP 0007.scaffold00024 294087 1 A C scaffold12658 Both SNP 0007.scaffold00024 294095 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 294408 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 294429 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 294434 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 294436 1 T C scaffold12658 ReadM INDEL 0007.scaffold00024 294631 1 A . - ReadM SNP 0007.scaffold00024 294722 1 G T - ScafM SNP 0007.scaffold00024 294982 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 294989 1 G C scaffold12658 ScafM INDEL 0007.scaffold00024 295002 1 . G scaffold12658 ScafM SNP 0007.scaffold00024 295026 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 295864 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 295894 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 295932 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 295945 8 ........ TCACGTAG scaffold12658 ScafM SNP 0007.scaffold00024 295974 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 295995 36 AGTTATCTCAATCCTATTCCTTCCCCTTCAATCTTG .................................... scaffold12658 ScafM INDEL 0007.scaffold00024 296035 2 AC .. scaffold12658 ScafM INDEL 0007.scaffold00024 296038 7 CGGGCAA ....... scaffold12658 ScafM INDEL 0007.scaffold00024 296048 4 TTAT .... scaffold12658 ScafM INDEL 0007.scaffold00024 296069 1 C . scaffold12658 ScafM SNP 0007.scaffold00024 296091 1 G C scaffold12658 Both SNP 0007.scaffold00024 296285 1 A T scaffold12658 Both SNP 0007.scaffold00024 296319 1 C T scaffold12658 Both SNP 0007.scaffold00024 296453 1 T C scaffold12658 Both INDEL 0007.scaffold00024 296487 2 TG .. scaffold12658 Both SNP 0007.scaffold00024 296573 1 T C scaffold12658 Both SNP 0007.scaffold00024 296740 1 T A scaffold12658 Both SNP 0007.scaffold00024 296793 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 296952 2 .. TT scaffold12658 Both SNP 0007.scaffold00024 297219 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 297288 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 297290 1 . A scaffold12658 ScafM INDEL 0007.scaffold00024 297299 3 GGC ... scaffold12658 ScafM SNP 0007.scaffold00024 297350 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 297354 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 297356 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 297370 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 297385 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 297400 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 297413 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 297431 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 297434 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 297457 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 297501 3 TCT ... scaffold12658 ScafM SNP 0007.scaffold00024 297559 2 AG TT scaffold12658 ScafM SNP 0007.scaffold00024 297564 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 297637 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 297689 2 GT TA scaffold12658 ScafM INDEL 0007.scaffold00024 297701 1 C . scaffold12658 ScafM INDEL 0007.scaffold00024 297708 1 A . scaffold12658 ScafM SNP 0007.scaffold00024 297717 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 297740 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 297747 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 297791 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 297796 1 C T scaffold12658 Both SNP 0007.scaffold00024 297807 1 T A scaffold12658 Both SNP 0007.scaffold00024 297856 1 C T scaffold12658 Both SNP 0007.scaffold00024 297924 1 A T scaffold12658 Both SNP 0007.scaffold00024 298007 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 298071 2 AT TA scaffold12658 Both SNP 0007.scaffold00024 298116 1 A G scaffold12658 Both INDEL 0007.scaffold00024 298276 1 . T scaffold12658 Both SNP 0007.scaffold00024 298306 1 T G scaffold12658 Both INDEL 0007.scaffold00024 298310 1 A . scaffold12658 Both SNP 0007.scaffold00024 298391 1 T A scaffold12658 Both SNP 0007.scaffold00024 298427 1 G A scaffold12658 Both SNP 0007.scaffold00024 298436 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 298476 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 298487 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 298489 1 . C scaffold12658 ScafM SNP 0007.scaffold00024 298528 2 CT AA scaffold12658 ScafM SNP 0007.scaffold00024 298548 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 298556 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 298584 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 298604 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 298611 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 298673 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 298678 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 298683 1 G A scaffold12658 Both SNP 0007.scaffold00024 298703 1 G A scaffold12658 Both SNP 0007.scaffold00024 298798 1 A T scaffold12658 Both SNP 0007.scaffold00024 298800 1 G C scaffold12658 Both SNP 0007.scaffold00024 298855 1 A G scaffold12658 Both SNP 0007.scaffold00024 298901 1 G T scaffold12658 Both SNP 0007.scaffold00024 298959 1 T C scaffold12658 Both SNP 0007.scaffold00024 298972 1 C T scaffold12658 Both SNP 0007.scaffold00024 299008 1 A G scaffold12658 Both INDEL 0007.scaffold00024 299068 1 C . scaffold12658 ScafM INDEL 0007.scaffold00024 299187 3 ... AAA scaffold12658 ScafM SNP 0007.scaffold00024 299191 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 299194 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 299196 3 ... TAC scaffold12658 ScafM SNP 0007.scaffold00024 299227 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 299229 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 299231 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 299236 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 299246 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 299253 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 299279 1 G C scaffold12658 Both SNP 0007.scaffold00024 299305 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 299371 2 TA .. scaffold12658 ScafM SNP 0007.scaffold00024 299387 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 299399 1 G A scaffold12658 Both SNP 0007.scaffold00024 299448 1 A G scaffold12658 Both INDEL 0007.scaffold00024 299471 1 G . scaffold12658 Both SNP 0007.scaffold00024 299525 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 299536 2 CA TG scaffold12658 Both SNP 0007.scaffold00024 299645 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 299675 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 299692 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 299695 2 CA TC scaffold12658 ScafM INDEL 0007.scaffold00024 299751 19 CAGCAGACTCCAGGATGAT ................... scaffold12658 Both SNP 0007.scaffold00024 299808 1 C A scaffold12658 Both INDEL 0007.scaffold00024 299917 1 . C scaffold12658 Both SNP 0007.scaffold00024 299934 1 G A scaffold12658 Both SNP 0007.scaffold00024 299981 1 G T scaffold12658 Both SNP 0007.scaffold00024 300075 1 G T scaffold12658 Both SNP 0007.scaffold00024 300150 1 T G scaffold12658 ReadM SNP 0007.scaffold00024 300186 1 A G - ReadM INDEL 0007.scaffold00024 300227 1 . G - ReadM SNP 0007.scaffold00024 300260 1 T C - ReadM SNP 0007.scaffold00024 300313 1 C T - ReadM SNP 0007.scaffold00024 300367 1 C T - ScafM INDEL 0007.scaffold00024 300421 4 .... TAAT scaffold12658 ScafM SNP 0007.scaffold00024 300434 1 A T scaffold12658 ScafM INDEL 0007.scaffold00024 300471 10 .......... GACCCACCCT scaffold12658 Both SNP 0007.scaffold00024 300495 1 A T scaffold12658 Both SNP 0007.scaffold00024 300579 1 A G scaffold12658 Both SNP 0007.scaffold00024 300587 1 T A scaffold12658 Both SNP 0007.scaffold00024 300602 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 300663 1 C T - ReadM SNP 0007.scaffold00024 300729 1 C G - Both SNP 0007.scaffold00024 300795 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 300912 1 T C - ScafM SNP 0007.scaffold00024 301391 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 301791 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 301816 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 301833 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 301845 1 . C scaffold12658 ScafM SNP 0007.scaffold00024 301855 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 301861 1 A C scaffold12658 Both SNP 0007.scaffold00024 302353 1 G C scaffold12658 Both SNP 0007.scaffold00024 302369 1 G A scaffold12658 Both SNP 0007.scaffold00024 302377 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 302410 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 302414 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 302423 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 302633 1 G T - ReadM SNP 0007.scaffold00024 302781 1 C A - ReadM SNP 0007.scaffold00024 302789 1 T A - ReadM SNP 0007.scaffold00024 302847 1 A G - ReadM INDEL 0007.scaffold00024 302851 2 CG .. - Both SNP 0007.scaffold00024 303011 1 T C scaffold12658 ReadM INDEL 0007.scaffold00024 303077 1 T . - ReadM SNP 0007.scaffold00024 303084 1 C G - ReadM SNP 0007.scaffold00024 303116 1 T C - ReadM SNP 0007.scaffold00024 303160 1 G T - ReadM SNP 0007.scaffold00024 303220 1 C G - ScafM SNP 0007.scaffold00024 303433 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 303473 2 .. GT scaffold12658 ScafM SNP 0007.scaffold00024 303475 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 303489 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 303495 1 T A scaffold12658 ScafM INDEL 0007.scaffold00024 303504 2 AT .G scaffold12658 ScafM SNP 0007.scaffold00024 303549 2 AC GT scaffold12658 ScafM SNP 0007.scaffold00024 303559 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 303584 1 T . scaffold12658 Both SNP 0007.scaffold00024 303619 1 A T scaffold12658 ReadM SNP 0007.scaffold00024 303652 1 A G - ReadM SNP 0007.scaffold00024 303662 1 A C - ScafM INDEL 0007.scaffold00024 303821 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 303868 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 303888 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 303893 1 T C scaffold12658 Both SNP 0007.scaffold00024 303906 1 C A scaffold12658 ReadM SNP 0007.scaffold00024 303983 1 A T - ReadM SNP 0007.scaffold00024 304083 1 G C - ReadM SNP 0007.scaffold00024 304254 1 T C - ReadM SNP 0007.scaffold00024 304306 1 A G - ReadM SNP 0007.scaffold00024 304338 1 A G - ReadM SNP 0007.scaffold00024 304374 1 T C - ReadM INDEL 0007.scaffold00024 304392 1 A . - ReadM SNP 0007.scaffold00024 304459 1 G A - ReadM SNP 0007.scaffold00024 304497 1 G A - ReadM SNP 0007.scaffold00024 304504 1 T C - Both SNP 0007.scaffold00024 304655 1 A C scaffold12658 Both SNP 0007.scaffold00024 304722 1 C A scaffold12658 ReadM SNP 0007.scaffold00024 304821 1 T C - ReadM INDEL 0007.scaffold00024 304831 1 G . - ScafM SNP 0007.scaffold00024 305013 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 305021 1 A T scaffold12658 Both SNP 0007.scaffold00024 305028 1 T C scaffold12658 Both SNP 0007.scaffold00024 305100 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 305170 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 305303 1 A T scaffold12658 Both SNP 0007.scaffold00024 305336 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 305381 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 305440 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 305474 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 305516 1 T . scaffold12658 ScafM SNP 0007.scaffold00024 305520 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 305607 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 305621 21 ..................... TATATATATATATATATATAT scaffold12658 ScafM INDEL 0007.scaffold00024 305646 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 305659 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 305763 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 305795 1 . C scaffold12658 ScafM SNP 0007.scaffold00024 305833 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 305856 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 305862 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 305878 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 305989 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 306011 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 306032 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 306069 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 306076 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 306078 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 306089 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 306112 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 306115 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 306117 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 306132 6 AAGGGC ...... scaffold12658 ReadM SNP 0007.scaffold00024 306278 1 T A - ReadM SNP 0007.scaffold00024 306290 1 A G - ReadM SNP 0007.scaffold00024 306308 1 T C - ReadM SNP 0007.scaffold00024 306416 1 A G - ReadM INDEL 0007.scaffold00024 306427 1 T . - ReadM SNP 0007.scaffold00024 306590 1 T C - ReadM INDEL 0007.scaffold00024 306591 1 . A - ReadM SNP 0007.scaffold00024 306719 1 G C - ReadM SNP 0007.scaffold00024 306735 1 A C - ReadM SNP 0007.scaffold00024 306777 1 G A - ReadM SNP 0007.scaffold00024 306841 1 T A - ReadM SNP 0007.scaffold00024 306849 1 C T - ScafM SNP 0007.scaffold00024 306971 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 307090 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 307114 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 307126 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 307133 1 . G scaffold12658 ScafM SNP 0007.scaffold00024 307146 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 307156 2 CC TT scaffold12658 ScafM INDEL 0007.scaffold00024 307183 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 307189 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 307197 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 307224 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 307325 2 CC TT scaffold12658 ScafM SNP 0007.scaffold00024 307354 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 307365 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 307390 1 C G scaffold12658 ScafM INDEL 0007.scaffold00024 307417 1 C . scaffold12658 ScafM SNP 0007.scaffold00024 307424 1 G C scaffold12658 ScafM INDEL 0007.scaffold00024 307476 2 .. TT scaffold12658 ScafM SNP 0007.scaffold00024 307498 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 307517 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 307546 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 307552 1 C G scaffold12658 Both SNP 0007.scaffold00024 307575 1 A G scaffold12658 Both SNP 0007.scaffold00024 307640 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 307677 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 307708 1 T C - ReadM SNP 0007.scaffold00024 307714 1 G A - ReadM SNP 0007.scaffold00024 307740 1 A G - ReadM SNP 0007.scaffold00024 307794 1 G A - ReadM SNP 0007.scaffold00024 307823 1 G C - ReadM SNP 0007.scaffold00024 307835 1 C A - ReadM SNP 0007.scaffold00024 307966 1 G A - ReadM INDEL 0007.scaffold00024 308020 1 . T - ReadM SNP 0007.scaffold00024 308221 1 T A - ReadM SNP 0007.scaffold00024 308375 1 G A - ReadM INDEL 0007.scaffold00024 308448 1 T . - ReadM SNP 0007.scaffold00024 308701 1 C G - ReadM SNP 0007.scaffold00024 308742 1 T C - ReadM SNP 0007.scaffold00024 308754 1 T C - ReadM SNP 0007.scaffold00024 308791 1 A G - ReadM SNP 0007.scaffold00024 308863 1 C T - ReadM SNP 0007.scaffold00024 308877 1 A G - Both SNP 0007.scaffold00024 308881 1 G A scaffold12658 Both SNP 0007.scaffold00024 308918 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 308979 14 ACTTCGGAGGAAGT .............. scaffold12658 ScafM SNP 0007.scaffold00024 309047 1 T G scaffold12658 ScafM INDEL 0007.scaffold00024 309087 1 A . scaffold12658 ScafM INDEL 0007.scaffold00024 309091 5 ACAAA ...GT scaffold12658 ScafM SNP 0007.scaffold00024 309099 2 TT GG scaffold12658 ScafM INDEL 0007.scaffold00024 309101 2 .. GA scaffold12658 ScafM SNP 0007.scaffold00024 309108 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 309114 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 309116 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 309138 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 309204 22 ...................... AGGCCTGAATTTTGGGGGGAAG scaffold12658 ScafM SNP 0007.scaffold00024 309215 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 309218 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 309227 5 AAAAA GGGGG scaffold12658 ScafM INDEL 0007.scaffold00024 309241 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 309255 1 T G scaffold12658 Both SNP 0007.scaffold00024 309270 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 309276 1 G T scaffold12658 Both SNP 0007.scaffold00024 309397 1 C G scaffold12658 Both SNP 0007.scaffold00024 309414 1 C A scaffold12658 Both SNP 0007.scaffold00024 309496 1 C T scaffold12658 Both SNP 0007.scaffold00024 309502 1 A T scaffold12658 Both SNP 0007.scaffold00024 309610 1 G A scaffold12658 ReadM SNP 0007.scaffold00024 309747 1 T C - ReadM SNP 0007.scaffold00024 309787 1 T G - ReadM SNP 0007.scaffold00024 309879 1 C T - ReadM SNP 0007.scaffold00024 309905 1 G C - ReadM SNP 0007.scaffold00024 309930 1 T G - Both SNP 0007.scaffold00024 310034 1 C T scaffold12658 Both SNP 0007.scaffold00024 310055 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 310070 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 310080 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 310103 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 310139 2 .. TA scaffold12658 Both SNP 0007.scaffold00024 310169 1 A G scaffold12658 Both SNP 0007.scaffold00024 310180 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 310290 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 310292 1 A G scaffold12658 Both SNP 0007.scaffold00024 310336 1 C G scaffold12658 Both SNP 0007.scaffold00024 310447 1 T C scaffold12658 Both INDEL 0007.scaffold00024 310533 1 . T scaffold12658 Both SNP 0007.scaffold00024 310558 1 C T scaffold12658 Both SNP 0007.scaffold00024 310577 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 310597 1 G A scaffold12658 Both SNP 0007.scaffold00024 310619 1 A G scaffold12658 Both SNP 0007.scaffold00024 310667 1 T A scaffold12658 Both SNP 0007.scaffold00024 310676 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 310707 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 310716 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 310752 7 ....... TATGCAT scaffold12658 ScafM INDEL 0007.scaffold00024 310754 4 .... GAAA scaffold12658 ScafM INDEL 0007.scaffold00024 310755 1 . T scaffold12658 ScafM INDEL 0007.scaffold00024 310758 7 ....... TTTTACA scaffold12658 ScafM INDEL 0007.scaffold00024 310759 1 . G scaffold12658 ScafM INDEL 0007.scaffold00024 310761 5 ..... GACCA scaffold12658 ScafM INDEL 0007.scaffold00024 310764 1 . G scaffold12658 ScafM INDEL 0007.scaffold00024 310766 11 ........... ACAAAAGAATA scaffold12658 ScafM INDEL 0007.scaffold00024 310767 1 . T scaffold12658 Both SNP 0007.scaffold00024 310855 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 311016 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 311020 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 311031 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 311036 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 311040 1 T A scaffold12658 Both SNP 0007.scaffold00024 311174 1 A G scaffold12658 Both SNP 0007.scaffold00024 311196 1 A C scaffold12658 Both SNP 0007.scaffold00024 311206 1 T G scaffold12658 Both SNP 0007.scaffold00024 311256 1 A G scaffold12658 Both SNP 0007.scaffold00024 311319 1 A G scaffold12658 Both SNP 0007.scaffold00024 311391 1 G T scaffold12658 Both SNP 0007.scaffold00024 311399 1 G A scaffold12658 Both SNP 0007.scaffold00024 311471 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 311769 1 G A scaffold12658 Both SNP 0007.scaffold00024 311835 1 G A scaffold12658 Both SNP 0007.scaffold00024 311896 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 311937 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 311946 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 311960 3 ... TAG scaffold12658 ScafM SNP 0007.scaffold00024 311991 1 G A scaffold12658 Both SNP 0007.scaffold00024 312029 1 G A scaffold12658 Both SNP 0007.scaffold00024 312080 1 T A scaffold12658 Both SNP 0007.scaffold00024 312119 1 T A scaffold12658 Both SNP 0007.scaffold00024 312146 1 A C scaffold12658 Both INDEL 0007.scaffold00024 312195 1 . G scaffold12658 Both SNP 0007.scaffold00024 312213 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 312246 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 312254 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 312262 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 312265 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 312271 4 TAAA .... scaffold12658 ScafM SNP 0007.scaffold00024 312302 1 C G scaffold12658 Both SNP 0007.scaffold00024 312388 1 C T scaffold12658 Both SNP 0007.scaffold00024 312416 1 G C scaffold12658 ScafM INDEL 0007.scaffold00024 312452 3 ... GTG scaffold12658 Both SNP 0007.scaffold00024 312489 1 A G scaffold12658 Both SNP 0007.scaffold00024 312560 1 G A scaffold12658 ReadM INDEL 0007.scaffold00024 312590 1 A . - ReadM SNP 0007.scaffold00024 312650 1 T C - Both SNP 0007.scaffold00024 312867 1 A C scaffold12658 ReadM SNP 0007.scaffold00024 312964 1 G A - ReadM SNP 0007.scaffold00024 312988 1 A T - ReadM SNP 0007.scaffold00024 313019 1 T C - ReadM SNP 0007.scaffold00024 313060 1 C T - ReadM SNP 0007.scaffold00024 313178 1 T C - Both SNP 0007.scaffold00024 313209 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 313266 10 AAAATGTTTA .......... scaffold12658 Both SNP 0007.scaffold00024 313316 1 A G scaffold12658 Both SNP 0007.scaffold00024 313335 1 C T scaffold12658 Both SNP 0007.scaffold00024 313337 1 C T scaffold12658 Both SNP 0007.scaffold00024 313399 1 T C scaffold12658 Both SNP 0007.scaffold00024 313449 1 T C scaffold12658 Both SNP 0007.scaffold00024 313529 1 T C scaffold12658 Both SNP 0007.scaffold00024 314002 1 G T scaffold12658 Both SNP 0007.scaffold00024 314548 1 A C scaffold12658 Both SNP 0007.scaffold00024 314552 1 G C scaffold12658 ReadM INDEL 0007.scaffold00024 314671 1 A . - ReadM SNP 0007.scaffold00024 314677 1 C T - ReadM SNP 0007.scaffold00024 314996 1 G A - Both SNP 0007.scaffold00024 315456 1 G A scaffold12658 Both SNP 0007.scaffold00024 315571 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 315597 1 G A - Both SNP 0007.scaffold00024 315626 1 G A scaffold12658 Both SNP 0007.scaffold00024 315635 1 A G scaffold12658 Both SNP 0007.scaffold00024 315686 1 A G scaffold12658 Both SNP 0007.scaffold00024 315820 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 316222 1 T C - ReadM SNP 0007.scaffold00024 316386 1 C G - ReadM SNP 0007.scaffold00024 316388 1 T G - Both SNP 0007.scaffold00024 316679 1 G A scaffold12658 Both SNP 0007.scaffold00024 316692 1 G A scaffold12658 Both SNP 0007.scaffold00024 316748 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 316958 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 316960 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 317143 1 G A scaffold12658 ReadM SNP 0007.scaffold00024 318125 1 T C - Both SNP 0007.scaffold00024 318650 1 C A scaffold12658 Both SNP 0007.scaffold00024 318707 1 A G scaffold12658 Both SNP 0007.scaffold00024 318717 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 318874 1 T C - ReadM SNP 0007.scaffold00024 318884 1 T C - ReadM SNP 0007.scaffold00024 321451 1 A G - ReadM SNP 0007.scaffold00024 321485 1 G A - ReadM SNP 0007.scaffold00024 321971 1 T C - ReadM SNP 0007.scaffold00024 322405 1 G C - ReadM SNP 0007.scaffold00024 322472 1 C A - ReadM SNP 0007.scaffold00024 322529 1 T G - ReadM SNP 0007.scaffold00024 322840 1 T A - Both SNP 0007.scaffold00024 322982 1 C G scaffold12658 Both SNP 0007.scaffold00024 323033 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 323087 1 C T - ReadM SNP 0007.scaffold00024 323298 1 A T - ReadM SNP 0007.scaffold00024 323435 1 T C - ReadM SNP 0007.scaffold00024 323461 1 G A - ReadM SNP 0007.scaffold00024 323470 1 A G - ReadM SNP 0007.scaffold00024 323617 1 G A - ReadM SNP 0007.scaffold00024 323621 1 C T - ReadM SNP 0007.scaffold00024 323971 1 T C - ScafM SNP 0007.scaffold00024 324149 1 G A scaffold12658 ReadM INDEL 0007.scaffold00024 324374 1 A . - ReadM SNP 0007.scaffold00024 324508 1 C G - ReadM SNP 0007.scaffold00024 324893 1 A G - ReadM SNP 0007.scaffold00024 324962 1 T C - ReadM SNP 0007.scaffold00024 325153 1 G A - ReadM SNP 0007.scaffold00024 325787 1 A T - ReadM SNP 0007.scaffold00024 325807 1 T C - ReadM SNP 0007.scaffold00024 326305 1 T A - ReadM SNP 0007.scaffold00024 326322 1 C T - ReadM SNP 0007.scaffold00024 326451 1 G A - ReadM SNP 0007.scaffold00024 326518 1 G A - ReadM SNP 0007.scaffold00024 326602 1 A C - ReadM SNP 0007.scaffold00024 326753 1 A T - Both SNP 0007.scaffold00024 326963 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 326995 1 G A - ReadM SNP 0007.scaffold00024 327048 1 G T - Both SNP 0007.scaffold00024 327369 1 C A scaffold12658 Both SNP 0007.scaffold00024 327517 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 327663 1 T C - ReadM INDEL 0007.scaffold00024 327791 2 .. TC - ReadM SNP 0007.scaffold00024 327862 1 C A - ReadM SNP 0007.scaffold00024 328159 1 G A - ReadM SNP 0007.scaffold00024 328790 1 A G - ReadM SNP 0007.scaffold00024 329124 1 T C - ReadM SNP 0007.scaffold00024 344754 1 T C - ReadM SNP 0007.scaffold00024 344942 1 T C - ReadM SNP 0007.scaffold00024 345007 1 T A - ReadM SNP 0007.scaffold00024 345019 1 C T - ReadM SNP 0007.scaffold00024 345233 1 G A - ReadM SNP 0007.scaffold00024 345444 1 T A - ReadM SNP 0007.scaffold00024 345470 1 G A - ReadM SNP 0007.scaffold00024 345698 1 A G - ReadM SNP 0007.scaffold00024 345813 1 T C - ReadM SNP 0007.scaffold00024 345869 1 G A - ReadM SNP 0007.scaffold00024 345927 1 T C - ReadM SNP 0007.scaffold00024 346102 1 T C - ReadM SNP 0007.scaffold00024 346374 1 C T - ReadM SNP 0007.scaffold00024 346457 1 G A - ReadM SNP 0007.scaffold00024 346519 1 G C - ReadM SNP 0007.scaffold00024 346606 1 C T - ReadM SNP 0007.scaffold00024 346942 1 C T - ReadM SNP 0007.scaffold00024 346987 1 A G - Both SNP 0007.scaffold00024 347216 1 A G scaffold12658 Both SNP 0007.scaffold00024 347254 1 C T scaffold12658 Both SNP 0007.scaffold00024 348059 1 G A scaffold12658 Both SNP 0007.scaffold00024 348124 1 T A scaffold12658 Both SNP 0007.scaffold00024 349285 1 G C scaffold12658 Both SNP 0007.scaffold00024 349905 1 T C scaffold12658 Both SNP 0007.scaffold00024 350243 1 C T scaffold12658 Both SNP 0007.scaffold00024 350358 1 C A scaffold12658 Both SNP 0007.scaffold00024 350608 1 C T scaffold12658 Both SNP 0007.scaffold00024 350762 1 G A scaffold12658 Both SNP 0007.scaffold00024 351009 1 G A scaffold12658 Both SNP 0007.scaffold00024 351053 1 T C scaffold12658 Both SNP 0007.scaffold00024 351118 1 T G scaffold12658 ReadM INDEL 0007.scaffold00024 351157 1 G . - ReadM INDEL 0007.scaffold00024 351158 1 A . - ReadM SNP 0007.scaffold00024 351400 1 T C - Both SNP 0007.scaffold00024 351589 1 T C scaffold12658 Both SNP 0007.scaffold00024 351605 1 T A scaffold12658 Both SNP 0007.scaffold00024 351843 1 G A scaffold12658 Both SNP 0007.scaffold00024 352019 1 G T scaffold12658 ScafM INDEL 0007.scaffold00024 352055 1 . A scaffold12658 ReadM SNP 0007.scaffold00024 352193 1 T C - Both SNP 0007.scaffold00024 352728 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 352896 1 G A - Both SNP 0007.scaffold00024 353576 1 A G scaffold12658 Both SNP 0007.scaffold00024 353631 1 C A scaffold12658 Both SNP 0007.scaffold00024 353827 1 G T scaffold12658 Both SNP 0007.scaffold00024 354090 1 A G scaffold12658 Both INDEL 0007.scaffold00024 354799 1 . T scaffold12658 Both SNP 0007.scaffold00024 355030 1 C G scaffold12658 Both SNP 0007.scaffold00024 355247 1 A C scaffold12658 Both SNP 0007.scaffold00024 355335 1 T C scaffold12658 Both SNP 0007.scaffold00024 355543 1 T C scaffold12658 Both SNP 0007.scaffold00024 355545 1 G A scaffold12658 Both SNP 0007.scaffold00024 355847 1 G A scaffold12658 Both SNP 0007.scaffold00024 356650 1 T A scaffold12658 Both SNP 0007.scaffold00024 357022 1 A T scaffold12658 Both SNP 0007.scaffold00024 357369 1 C T scaffold12658 Both SNP 0007.scaffold00024 357701 1 A G scaffold12658 Both SNP 0007.scaffold00024 358614 1 G A scaffold12658 Both SNP 0007.scaffold00024 358685 1 T G scaffold12658 ScafM INDEL 0007.scaffold00024 358828 21 ..................... ACAACAACAACAACAACAACA scaffold12658 Both SNP 0007.scaffold00024 359426 1 T A scaffold12658 Both SNP 0007.scaffold00024 359447 1 T A scaffold12658 Both SNP 0007.scaffold00024 359686 1 G A scaffold12658 Both SNP 0007.scaffold00024 359865 1 T C scaffold12658 Both SNP 0007.scaffold00024 360085 1 T A scaffold12658 Both SNP 0007.scaffold00024 360534 1 A G scaffold12658 Both SNP 0007.scaffold00024 360850 1 T C scaffold12658 Both INDEL 0007.scaffold00024 361346 1 . A scaffold12658 ScafM SNP 0007.scaffold00024 361352 1 G A scaffold12658 Both SNP 0007.scaffold00024 361749 1 T C scaffold12658 Both SNP 0007.scaffold00024 361842 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 362390 4 GGCA .... scaffold12658 Both SNP 0007.scaffold00024 362524 1 T C scaffold12658 Both SNP 0007.scaffold00024 362997 1 C G scaffold12658 Both SNP 0007.scaffold00024 363039 1 G T scaffold12658 Both SNP 0007.scaffold00024 363206 1 G T scaffold12658 Both SNP 0007.scaffold00024 363667 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 363680 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 364011 1 A T scaffold12658 Both SNP 0007.scaffold00024 364022 1 A C scaffold12658 Both INDEL 0007.scaffold00024 364125 1 . C scaffold12658 Both SNP 0007.scaffold00024 364767 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 364776 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 364800 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 364804 1 T A scaffold12658 ReadM SNP 0007.scaffold00024 364932 1 A G - ScafM INDEL 0007.scaffold00024 365082 3 ACT ... scaffold12658 ScafM SNP 0007.scaffold00024 365099 1 G T scaffold12658 Both SNP 0007.scaffold00024 365226 1 A C scaffold12658 Both SNP 0007.scaffold00024 365234 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 365568 1 G A - Both SNP 0007.scaffold00024 365691 1 C T scaffold12658 Both INDEL 0007.scaffold00024 365805 2 GA .. scaffold12658 ReadM SNP 0007.scaffold00024 366211 1 A G - ReadM SNP 0007.scaffold00024 366247 1 G A - ReadM SNP 0007.scaffold00024 366354 1 G T - ReadM SNP 0007.scaffold00024 366441 1 C T - ReadM SNP 0007.scaffold00024 366469 1 G T - ScafM SNP 0007.scaffold00024 366604 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 366607 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 366610 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 366662 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 366698 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 366727 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 366731 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 366735 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 366743 1 T G scaffold12658 ScafM INDEL 0007.scaffold00024 366748 1 C . scaffold12658 ScafM SNP 0007.scaffold00024 366763 3 AAG CGA scaffold12658 ScafM INDEL 0007.scaffold00024 366773 1 . T scaffold12658 ScafM INDEL 0007.scaffold00024 366786 1 . A scaffold12658 ScafM SNP 0007.scaffold00024 366789 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 366912 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 366917 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 366928 2 TA CG scaffold12658 ScafM SNP 0007.scaffold00024 366947 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 366956 2 TC CA scaffold12658 ScafM SNP 0007.scaffold00024 366967 1 T C scaffold12658 Both SNP 0007.scaffold00024 367167 1 A T scaffold12658 Both SNP 0007.scaffold00024 367197 1 C T scaffold12658 Both SNP 0007.scaffold00024 367272 1 T C scaffold12658 Both SNP 0007.scaffold00024 367288 1 G C scaffold12658 Both SNP 0007.scaffold00024 367353 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 367483 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 367485 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 367843 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 367849 1 G C scaffold12658 ScafM INDEL 0007.scaffold00024 367851 1 . C scaffold12658 ScafM INDEL 0007.scaffold00024 367856 1 A . scaffold12658 ScafM SNP 0007.scaffold00024 367861 2 AG TT scaffold12658 ScafM INDEL 0007.scaffold00024 367867 2 GT .. scaffold12658 ScafM SNP 0007.scaffold00024 367883 1 G C scaffold12658 ScafM INDEL 0007.scaffold00024 367893 1 A . scaffold12658 ScafM SNP 0007.scaffold00024 367910 2 CG GT scaffold12658 ScafM SNP 0007.scaffold00024 367919 1 T G scaffold12658 Both SNP 0007.scaffold00024 371286 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 371351 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 371368 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 371375 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 371408 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 371421 1 . A scaffold12658 ScafM SNP 0007.scaffold00024 371444 1 T A scaffold12658 ScafM INDEL 0007.scaffold00024 371463 1 G . scaffold12658 ScafM SNP 0007.scaffold00024 371489 1 G A scaffold12658 Both SNP 0007.scaffold00024 373746 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 373780 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 373887 1 C T - ReadM SNP 0007.scaffold00024 373917 1 A G - ScafM SNP 0007.scaffold00024 374251 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 374267 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 374275 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 374330 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 374333 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 374354 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 377389 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 377401 2 CA TG scaffold12658 ScafM SNP 0007.scaffold00024 377460 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 377474 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 377483 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 377503 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 377579 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 377586 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 377601 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 378621 1 G A - ReadM SNP 0007.scaffold00024 378662 1 C T - ReadM SNP 0007.scaffold00024 378686 1 G A - ReadM SNP 0007.scaffold00024 378774 1 G A - ReadM SNP 0007.scaffold00024 378805 1 G T - ReadM SNP 0007.scaffold00024 379002 1 A T - ReadM SNP 0007.scaffold00024 379026 1 T C - ReadM SNP 0007.scaffold00024 379033 1 T C - ReadM SNP 0007.scaffold00024 379085 1 G C - ReadM SNP 0007.scaffold00024 379116 1 G T - ScafM SNP 0007.scaffold00024 379209 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 379220 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 379231 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 379242 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 380191 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 380906 1 A G scaffold2235 ScafM SNP 0007.scaffold00024 381009 1 T G scaffold2235 ScafM INDEL 0007.scaffold00024 381014 2 .. AA scaffold2235 ScafM SNP 0007.scaffold00024 381073 1 G A scaffold2235 ScafM SNP 0007.scaffold00024 381079 1 G C scaffold2235 ScafM SNP 0007.scaffold00024 381094 2 TG CA scaffold2235 ScafM SNP 0007.scaffold00024 381258 1 C T scaffold2235 ScafM SNP 0007.scaffold00024 381344 1 A G scaffold2235 ScafM SNP 0007.scaffold00024 381347 1 C T scaffold2235 ScafM SNP 0007.scaffold00024 381367 1 A G scaffold2235 ScafM SNP 0007.scaffold00024 381408 2 TC CT scaffold2235 ScafM SNP 0007.scaffold00024 381437 1 G T scaffold2235 ScafM SNP 0007.scaffold00024 381567 1 A G scaffold2235 ScafM SNP 0007.scaffold00024 381601 1 G A scaffold2235 ScafM SNP 0007.scaffold00024 381606 1 T C scaffold2235 ScafM SNP 0007.scaffold00024 381662 1 G T scaffold2235 ScafM SNP 0007.scaffold00024 381729 1 C T scaffold2235 ScafM INDEL 0007.scaffold00024 381737 4 .... TTAA scaffold2235 ScafM SNP 0007.scaffold00024 381746 1 A G scaffold2235 ScafM SNP 0007.scaffold00024 381770 1 G T scaffold2235 ScafM SNP 0007.scaffold00024 382040 1 T A scaffold12658 ScafM INDEL 0007.scaffold00024 382081 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 382092 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 382127 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 382160 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 382204 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 382249 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 382252 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 382258 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 382299 1 T G scaffold12658 ReadM SNP 0007.scaffold00024 382498 1 G A - ReadM SNP 0007.scaffold00024 382710 1 T C - ReadM INDEL 0007.scaffold00024 382773 1 . G - ReadM SNP 0007.scaffold00024 382948 1 A G - ReadM SNP 0007.scaffold00024 382958 1 C A - ReadM SNP 0007.scaffold00024 382982 1 T C - ReadM INDEL 0007.scaffold00024 383024 1 A . - Both SNP 0007.scaffold00024 383064 1 C T scaffold12658 Both SNP 0007.scaffold00024 383125 1 A G scaffold12658 Both SNP 0007.scaffold00024 383191 1 G A scaffold12658 Both SNP 0007.scaffold00024 383255 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 383312 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 383330 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 383354 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 383356 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 383377 1 . A scaffold12658 Both SNP 0007.scaffold00024 383390 1 T C scaffold12658 Both SNP 0007.scaffold00024 383404 1 C T scaffold12658 Both INDEL 0007.scaffold00024 383543 2 TG .. scaffold12658 Both SNP 0007.scaffold00024 383579 1 T A scaffold12658 Both SNP 0007.scaffold00024 383744 1 A G scaffold12658 Both SNP 0007.scaffold00024 383781 1 A G scaffold12658 Both SNP 0007.scaffold00024 383858 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 383867 1 A . scaffold12658 Both SNP 0007.scaffold00024 383920 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 383954 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 384032 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 384051 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 384201 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 384249 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 384269 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 384301 1 T . scaffold12658 ScafM SNP 0007.scaffold00024 384316 1 A C scaffold12658 ScafM SNP 0007.scaffold00024 384331 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 384336 1 G A scaffold12658 ScafM INDEL 0007.scaffold00024 385627 2 .A GT scaffold12658 ScafM SNP 0007.scaffold00024 385635 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 385654 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 385660 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 385711 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 385726 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 385731 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 385741 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 385759 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 385768 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 385770 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 385784 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 385790 1 A T scaffold12658 ScafM SNP 0007.scaffold00024 385813 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 385825 1 A C scaffold12658 ScafM INDEL 0007.scaffold00024 385849 8 TATTTATG ........ scaffold12658 ScafM INDEL 0007.scaffold00024 385870 1 . 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T scaffold12658 Both SNP 0007.scaffold00024 392232 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 392243 1 T A scaffold12658 Both SNP 0007.scaffold00024 392248 1 T A scaffold12658 Both SNP 0007.scaffold00024 392374 1 T C scaffold12658 Both SNP 0007.scaffold00024 392408 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 392491 1 A T scaffold12658 Both SNP 0007.scaffold00024 392533 1 T C scaffold12658 Both SNP 0007.scaffold00024 392639 1 C G scaffold12658 Both SNP 0007.scaffold00024 392726 1 T A scaffold12658 Both SNP 0007.scaffold00024 392870 1 A T scaffold12658 Both SNP 0007.scaffold00024 392898 1 C T scaffold12658 Both SNP 0007.scaffold00024 392975 1 G T scaffold12658 Both SNP 0007.scaffold00024 393042 1 T A scaffold12658 ScafM INDEL 0007.scaffold00024 393326 1 . T scaffold12658 ScafM INDEL 0007.scaffold00024 393350 1 T . scaffold12658 Both SNP 0007.scaffold00024 393588 1 G T scaffold12658 Both SNP 0007.scaffold00024 393707 1 T C scaffold12658 Both SNP 0007.scaffold00024 393711 1 C A scaffold12658 Both SNP 0007.scaffold00024 393764 1 C T scaffold12658 Both SNP 0007.scaffold00024 393771 1 G A scaffold12658 ReadM SNP 0007.scaffold00024 393826 1 C T - ReadM SNP 0007.scaffold00024 393865 1 G T - Both SNP 0007.scaffold00024 393965 1 T C scaffold12658 ScafM INDEL 0007.scaffold00024 394139 1 C . scaffold12658 Both SNP 0007.scaffold00024 394187 1 T A scaffold12658 Both SNP 0007.scaffold00024 394299 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 394370 1 G T scaffold12658 ScafM INDEL 0007.scaffold00024 394413 1 . T scaffold12658 ReadM INDEL 0007.scaffold00024 394452 1 . 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AC - Both SNP 0007.scaffold00024 395282 1 T G scaffold12658 ReadM SNP 0007.scaffold00024 395370 1 T A - ReadM SNP 0007.scaffold00024 395403 1 C G - ReadM SNP 0007.scaffold00024 395457 1 T C - ReadM SNP 0007.scaffold00024 395474 1 A T - ReadM SNP 0007.scaffold00024 395487 1 A T - ReadM SNP 0007.scaffold00024 395529 1 T C - ReadM SNP 0007.scaffold00024 395603 1 A G - ReadM SNP 0007.scaffold00024 395648 1 T A - ReadM SNP 0007.scaffold00024 395803 1 G C - ReadM SNP 0007.scaffold00024 395820 1 A G - ReadM INDEL 0007.scaffold00024 395878 2 .. AA - ReadM SNP 0007.scaffold00024 395910 1 A G - ReadM SNP 0007.scaffold00024 395968 1 G C - ReadM SNP 0007.scaffold00024 395979 1 T A - ReadM SNP 0007.scaffold00024 395999 1 A C - ReadM SNP 0007.scaffold00024 396108 1 T C - ReadM SNP 0007.scaffold00024 396200 1 A G - ReadM SNP 0007.scaffold00024 396257 1 T A - ReadM SNP 0007.scaffold00024 396269 1 C T - ReadM SNP 0007.scaffold00024 396326 1 T C - ReadM SNP 0007.scaffold00024 396353 1 T G - ReadM SNP 0007.scaffold00024 396617 1 G A - ReadM SNP 0007.scaffold00024 396649 1 G T - ReadM SNP 0007.scaffold00024 396872 1 T C - ReadM SNP 0007.scaffold00024 396896 1 C T - ReadM SNP 0007.scaffold00024 397062 1 T C - ReadM SNP 0007.scaffold00024 397157 1 G T - ReadM SNP 0007.scaffold00024 397228 1 C T - ReadM SNP 0007.scaffold00024 397513 1 T C - ReadM SNP 0007.scaffold00024 397566 1 A T - ReadM INDEL 0007.scaffold00024 397574 1 T . - Both INDEL 0007.scaffold00024 397765 1 . G scaffold12658 ReadM SNP 0007.scaffold00024 397924 1 C T - Both SNP 0007.scaffold00024 397960 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 398035 1 G A - ReadM SNP 0007.scaffold00024 398083 1 G A - Both SNP 0007.scaffold00024 398172 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 398224 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 398233 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 398239 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 398526 1 T A - ReadM INDEL 0007.scaffold00024 398588 1 . T - ReadM SNP 0007.scaffold00024 398699 1 T C - ReadM SNP 0007.scaffold00024 398715 1 C T - ReadM SNP 0007.scaffold00024 398726 1 C T - ReadM SNP 0007.scaffold00024 398922 1 C A - ReadM SNP 0007.scaffold00024 398994 1 A T - ReadM SNP 0007.scaffold00024 399009 1 T C - ReadM SNP 0007.scaffold00024 399113 1 C T - ReadM SNP 0007.scaffold00024 399185 1 G A - ReadM INDEL 0007.scaffold00024 399236 3 ... TCT - ReadM INDEL 0007.scaffold00024 399239 2 .. TC - ReadM SNP 0007.scaffold00024 399300 1 A G - ReadM INDEL 0007.scaffold00024 399359 2 .. TT - ReadM INDEL 0007.scaffold00024 399542 1 . T - ReadM SNP 0007.scaffold00024 399643 1 T A - ReadM SNP 0007.scaffold00024 399687 1 C T - ReadM SNP 0007.scaffold00024 399765 1 A G - ReadM SNP 0007.scaffold00024 399793 1 C A - ReadM SNP 0007.scaffold00024 399804 1 T G - ReadM SNP 0007.scaffold00024 399928 1 G A - ReadM SNP 0007.scaffold00024 399930 1 G A - ReadM SNP 0007.scaffold00024 399953 1 A G - ReadM SNP 0007.scaffold00024 400000 1 C T - ReadM SNP 0007.scaffold00024 400048 1 C G - Both SNP 0007.scaffold00024 400081 1 T A scaffold12658 ReadM SNP 0007.scaffold00024 400210 1 A C - ReadM SNP 0007.scaffold00024 400316 1 A T - ScafM INDEL 0007.scaffold00024 400475 4 GCTA .... scaffold12658 Both SNP 0007.scaffold00024 400488 1 A G scaffold12658 Both SNP 0007.scaffold00024 400571 1 G A scaffold12658 Both SNP 0007.scaffold00024 400581 1 G A scaffold12658 Both SNP 0007.scaffold00024 400620 1 A G scaffold12658 Both SNP 0007.scaffold00024 400716 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 400781 2 AA TC scaffold12658 Both SNP 0007.scaffold00024 400846 1 T G scaffold12658 Both SNP 0007.scaffold00024 400897 1 C T scaffold12658 Both SNP 0007.scaffold00024 400954 1 C T scaffold12658 Both SNP 0007.scaffold00024 401122 1 T A scaffold12658 Both SNP 0007.scaffold00024 401135 1 T C scaffold12658 Both SNP 0007.scaffold00024 401147 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 401161 1 C T scaffold12658 Both SNP 0007.scaffold00024 401197 1 G A scaffold12658 Both SNP 0007.scaffold00024 401661 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 401748 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 401838 1 T C - ReadM SNP 0007.scaffold00024 402089 1 A G - ReadM SNP 0007.scaffold00024 402211 1 G C - ReadM SNP 0007.scaffold00024 402267 1 C T - ReadM SNP 0007.scaffold00024 402275 1 C T - ReadM SNP 0007.scaffold00024 402373 1 C T - ReadM SNP 0007.scaffold00024 402430 1 G A - ReadM SNP 0007.scaffold00024 402593 1 G A - ReadM SNP 0007.scaffold00024 402778 1 C T - ReadM SNP 0007.scaffold00024 402804 1 T C - Both SNP 0007.scaffold00024 403001 1 C A scaffold12658 Both SNP 0007.scaffold00024 403058 1 C T scaffold12658 Both SNP 0007.scaffold00024 403068 1 G C scaffold12658 Both SNP 0007.scaffold00024 403073 1 A C scaffold12658 Both SNP 0007.scaffold00024 403151 1 G A scaffold12658 Both SNP 0007.scaffold00024 403170 1 C A scaffold12658 ScafM INDEL 0007.scaffold00024 403270 6 ...... GCTGGA scaffold12658 ScafM INDEL 0007.scaffold00024 403272 3 ... GTG scaffold12658 Both SNP 0007.scaffold00024 403352 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 403463 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 403479 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 403491 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 403514 1 G T scaffold12658 Both SNP 0007.scaffold00024 403706 1 G A scaffold12658 Both SNP 0007.scaffold00024 403830 1 T C scaffold12658 Both SNP 0007.scaffold00024 403832 1 G A scaffold12658 Both SNP 0007.scaffold00024 403887 1 A G scaffold12658 ReadM SNP 0007.scaffold00024 403976 1 G T - Both SNP 0007.scaffold00024 404098 1 C A scaffold12658 Both SNP 0007.scaffold00024 404110 1 G A scaffold12658 Both INDEL 0007.scaffold00024 404121 1 . T scaffold12658 Both SNP 0007.scaffold00024 404210 1 C A scaffold12658 Both SNP 0007.scaffold00024 404389 1 G A scaffold12658 Both SNP 0007.scaffold00024 404499 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 404505 8 ........ TCAATGGC scaffold12658 Both SNP 0007.scaffold00024 404675 1 C A scaffold12658 ReadM INDEL 0007.scaffold00024 404768 3 CCT ... - ReadM SNP 0007.scaffold00024 404872 1 C T - ReadM SNP 0007.scaffold00024 404968 1 C T - ReadM SNP 0007.scaffold00024 404979 1 A T - ScafM INDEL 0007.scaffold00024 405124 10 TTAACTATTT .......... scaffold12658 ScafM SNP 0007.scaffold00024 405145 1 A T scaffold12658 Both SNP 0007.scaffold00024 405193 1 G T scaffold12658 Both SNP 0007.scaffold00024 405301 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 405400 1 C A scaffold12658 ScafM INDEL 0007.scaffold00024 405460 3 GAT ... scaffold12658 ScafM INDEL 0007.scaffold00024 405464 1 G . scaffold12658 ScafM INDEL 0007.scaffold00024 405516 7 ....... AGTCCCG scaffold12658 Both SNP 0007.scaffold00024 405560 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 405793 1 G A - ReadM SNP 0007.scaffold00024 405895 1 T C - ReadM SNP 0007.scaffold00024 405927 1 A G - ReadM SNP 0007.scaffold00024 405950 1 C T - ScafM INDEL 0007.scaffold00024 406071 63 ACGTAAAAAATAGTATTTAAAAGCTTGATTCTAAAAAAATTTATACAAACAACCACTTGATAG ............................................................... scaffold12658 ReadM SNP 0007.scaffold00024 406130 1 A T - ScafM INDEL 0007.scaffold00024 406287 2 TT .. scaffold12658 ReadM SNP 0007.scaffold00024 406343 1 G A - ReadM SNP 0007.scaffold00024 406419 1 G A - ReadM SNP 0007.scaffold00024 406457 1 A G - ReadM SNP 0007.scaffold00024 406464 1 A G - ReadM SNP 0007.scaffold00024 406501 1 A T - ReadM SNP 0007.scaffold00024 406503 1 A G - ReadM SNP 0007.scaffold00024 406630 1 C T - ReadM SNP 0007.scaffold00024 406645 1 C T - ReadM SNP 0007.scaffold00024 406692 1 A G - Both SNP 0007.scaffold00024 406808 1 T C scaffold12658 Both SNP 0007.scaffold00024 406817 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 406877 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 406901 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 406906 1 G T scaffold12658 ScafM SNP 0007.scaffold00024 406908 1 G C scaffold12658 ReadM SNP 0007.scaffold00024 407117 1 T G - Both SNP 0007.scaffold00024 407233 1 A T scaffold12658 Both SNP 0007.scaffold00024 407308 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 407333 1 T C scaffold12658 ReadM SNP 0007.scaffold00024 407402 1 C A - ReadM SNP 0007.scaffold00024 407485 1 C T - ReadM SNP 0007.scaffold00024 407507 1 G A - ReadM INDEL 0007.scaffold00024 407591 1 T . - ReadM INDEL 0007.scaffold00024 407661 1 C . - ReadM SNP 0007.scaffold00024 407679 1 A G - ReadM SNP 0007.scaffold00024 407716 1 G A - Both INDEL 0007.scaffold00024 408022 1 T . scaffold12658 ReadM SNP 0007.scaffold00024 408148 1 G C - ReadM SNP 0007.scaffold00024 408203 1 T C - ReadM SNP 0007.scaffold00024 408276 1 C T - Both SNP 0007.scaffold00024 408393 1 C T scaffold12658 Both SNP 0007.scaffold00024 408530 1 G T scaffold12658 Both SNP 0007.scaffold00024 408574 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 408650 1 T G scaffold12658 Both SNP 0007.scaffold00024 408653 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 408698 1 G T scaffold12658 ScafM INDEL 0007.scaffold00024 408702 3 AAG ... scaffold12658 Both SNP 0007.scaffold00024 408883 1 A C scaffold12658 Both SNP 0007.scaffold00024 408914 1 C T scaffold12658 Both SNP 0007.scaffold00024 408972 1 T C scaffold12658 Both SNP 0007.scaffold00024 409079 1 T C scaffold12658 Both SNP 0007.scaffold00024 409154 1 A G scaffold12658 Both SNP 0007.scaffold00024 409290 2 CT GA scaffold12658 Both SNP 0007.scaffold00024 409393 1 G C scaffold12658 Both INDEL 0007.scaffold00024 409398 1 T . scaffold12658 ScafM SNP 0007.scaffold00024 409440 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 409444 1 T C scaffold12658 Both SNP 0007.scaffold00024 409729 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 409775 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 409788 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 409798 2 CT TC scaffold12658 ReadM SNP 0007.scaffold00024 409872 1 G T - ReadM SNP 0007.scaffold00024 409925 1 G C - ReadM SNP 0007.scaffold00024 409949 1 A G - ReadM SNP 0007.scaffold00024 410018 1 C A - ReadM SNP 0007.scaffold00024 410153 1 A G - ReadM SNP 0007.scaffold00024 410187 1 T G - ReadM SNP 0007.scaffold00024 410248 1 A G - ReadM SNP 0007.scaffold00024 410297 1 C G - ReadM SNP 0007.scaffold00024 410328 1 T C - ReadM SNP 0007.scaffold00024 410333 1 A C - ReadM SNP 0007.scaffold00024 410406 1 A G - ReadM SNP 0007.scaffold00024 410445 1 G A - ReadM SNP 0007.scaffold00024 410461 1 A G - ReadM SNP 0007.scaffold00024 410504 1 G A - ReadM SNP 0007.scaffold00024 410588 1 T C - ReadM SNP 0007.scaffold00024 410594 1 C T - ReadM SNP 0007.scaffold00024 410708 1 G A - ReadM SNP 0007.scaffold00024 410757 1 A T - ReadM SNP 0007.scaffold00024 410784 1 C A - ReadM SNP 0007.scaffold00024 410871 1 G A - ReadM SNP 0007.scaffold00024 410966 1 A G - ReadM SNP 0007.scaffold00024 411012 1 C T - ReadM SNP 0007.scaffold00024 411035 1 G A - ReadM SNP 0007.scaffold00024 411066 1 T C - ReadM SNP 0007.scaffold00024 411080 1 C T - ReadM SNP 0007.scaffold00024 411084 1 G A - ReadM SNP 0007.scaffold00024 411150 1 A G - Both SNP 0007.scaffold00024 411249 1 A G scaffold12658 Both SNP 0007.scaffold00024 411270 1 G T scaffold12658 Both SNP 0007.scaffold00024 411310 1 G A scaffold12658 Both SNP 0007.scaffold00024 411390 1 T A scaffold12658 Both SNP 0007.scaffold00024 411449 1 T G scaffold12658 Both SNP 0007.scaffold00024 411490 1 C G scaffold12658 ScafM SNP 0007.scaffold00024 411538 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 411540 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 411562 1 T G scaffold12658 Both SNP 0007.scaffold00024 411579 1 C T scaffold12658 Both SNP 0007.scaffold00024 411627 1 A C scaffold12658 Both SNP 0007.scaffold00024 411656 1 C T scaffold12658 Both SNP 0007.scaffold00024 411698 1 A T scaffold12658 ReadM SNP 0007.scaffold00024 411798 1 T G - ReadM SNP 0007.scaffold00024 411831 1 T A - ReadM SNP 0007.scaffold00024 411834 1 C T - ReadM SNP 0007.scaffold00024 411857 1 C T - 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C scaffold12658 ScafM INDEL 0007.scaffold00024 453137 3 ... TTT scaffold12658 ScafM INDEL 0007.scaffold00024 453189 1 T . scaffold12658 Both SNP 0007.scaffold00024 453320 1 C A scaffold12658 Both INDEL 0007.scaffold00024 453333 1 C . scaffold12658 ScafM SNP 0007.scaffold00024 453349 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 453362 1 C T scaffold12658 ScafM INDEL 0007.scaffold00024 453408 1 G . scaffold12658 ScafM SNP 0007.scaffold00024 453410 1 T A scaffold12658 ReadM INDEL 0007.scaffold00024 453837 1 A . - ReadM SNP 0007.scaffold00024 453853 1 T A - ReadM SNP 0007.scaffold00024 453912 1 A C - Both SNP 0007.scaffold00024 454016 1 T C scaffold12658 Both SNP 0007.scaffold00024 454032 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454085 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 454094 1 C G scaffold12658 ScafM INDEL 0007.scaffold00024 454106 1 . T scaffold12658 ScafM SNP 0007.scaffold00024 454137 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 454287 2 CG .T scaffold12658 ScafM SNP 0007.scaffold00024 454323 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 454358 1 C T scaffold12658 ScafM SNP 0007.scaffold00024 454367 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454372 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 454376 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454403 1 T A scaffold12658 ScafM SNP 0007.scaffold00024 454406 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454422 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454428 1 G C scaffold12658 ScafM SNP 0007.scaffold00024 454445 2 AA GG scaffold12658 ScafM SNP 0007.scaffold00024 454456 1 G A scaffold12658 ScafM SNP 0007.scaffold00024 454463 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 454488 1 T G scaffold12658 ScafM SNP 0007.scaffold00024 454506 2 GG AA scaffold12658 ScafM SNP 0007.scaffold00024 454546 2 TA CG scaffold12658 ScafM SNP 0007.scaffold00024 454559 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 454585 2 GT AG scaffold12658 ReadM SNP 0007.scaffold00024 454815 1 A C - ReadM INDEL 0007.scaffold00024 454824 1 . G - ReadM SNP 0007.scaffold00024 454919 1 T C - ReadM SNP 0007.scaffold00024 454929 1 T A - ReadM SNP 0007.scaffold00024 455026 1 G A - ScafM INDEL 0007.scaffold00024 455234 1 . A scaffold12658 Both SNP 0007.scaffold00024 455271 1 G A scaffold12658 Both SNP 0007.scaffold00024 455293 1 A G scaffold12658 Both SNP 0007.scaffold00024 455308 1 C T scaffold12658 Both SNP 0007.scaffold00024 455406 1 A G scaffold12658 ScafM INDEL 0007.scaffold00024 455446 20 TGAGATGATTGAAACCTCAT .................... scaffold12658 ScafM INDEL 0007.scaffold00024 455467 7 ATTTTTA ....... scaffold12658 ScafM INDEL 0007.scaffold00024 455475 8 ATTCTAAA ........ scaffold12658 ScafM INDEL 0007.scaffold00024 455485 2 AT .. scaffold12658 ScafM INDEL 0007.scaffold00024 455489 8 ACTAATAA ........ scaffold12658 ScafM INDEL 0007.scaffold00024 455502 5 TCATA ..... scaffold12658 ScafM SNP 0007.scaffold00024 455531 1 A G scaffold12658 Both SNP 0007.scaffold00024 455558 1 C T scaffold12658 ReadM SNP 0007.scaffold00024 456216 1 C T - ReadM SNP 0007.scaffold00024 456240 1 A G - ReadM INDEL 0007.scaffold00024 456284 1 A . - ReadM SNP 0007.scaffold00024 456508 1 A G - ReadM SNP 0007.scaffold00024 456568 1 A G - ReadM SNP 0007.scaffold00024 456710 1 A T - ReadM SNP 0007.scaffold00024 456918 1 T G - ScafM SNP 0007.scaffold00024 465341 1 A G scaffold12658 ScafM SNP 0007.scaffold00024 465388 1 T C scaffold12658 ScafM SNP 0007.scaffold00024 466193 1 T C scaffold3949 ScafM SNP 0007.scaffold00024 466224 1 T C scaffold3949 ScafM SNP 0007.scaffold00024 466228 1 C T scaffold3949 ScafM SNP 0007.scaffold00024 466252 1 T G scaffold3949 ScafM SNP 0007.scaffold00024 466284 1 C T scaffold3949 ScafM INDEL 0007.scaffold00024 466302 1 T . scaffold3949 ScafM SNP 0007.scaffold00024 466331 1 G T scaffold3949 ScafM SNP 0007.scaffold00024 466366 1 G A scaffold3949 ScafM SNP 0007.scaffold00024 466375 1 G C scaffold3949 ScafM SNP 0007.scaffold00024 466391 1 T G scaffold3949 ScafM SNP 0007.scaffold00024 466564 1 T A scaffold3949 ScafM SNP 0007.scaffold00024 466667 1 C A scaffold3949 ScafM SNP 0007.scaffold00024 466669 1 T C scaffold3949 ScafM SNP 0007.scaffold00024 466677 1 T C scaffold3949 ScafM SNP 0007.scaffold00024 466696 1 T G scaffold3949 ScafM SNP 0007.scaffold00024 466731 1 G C scaffold3949 Both SNP 0007.scaffold00024 466749 1 C T scaffold3949 Both SNP 0007.scaffold00024 466759 1 C A scaffold3949 ReadM SNP 0007.scaffold00024 468995 1 G C - ReadM SNP 0007.scaffold00024 469004 1 G A - ReadM SNP 0007.scaffold00024 469510 1 G A - ReadM SNP 0007.scaffold00024 469521 1 G A - ReadM SNP 0007.scaffold00024 469890 1 A T - ScafM INDEL 0007.scaffold00024 470778 4 CGTA .... scaffold3949 ScafM SNP 0007.scaffold00024 475555 1 A G scaffold9456 ScafM SNP 0007.scaffold00024 475573 1 T C scaffold9456 ScafM SNP 0007.scaffold00024 475577 1 G C scaffold9456 ScafM INDEL 0007.scaffold00024 475591 1 T . scaffold9456 ScafM SNP 0007.scaffold00024 475603 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 475664 1 C T scaffold9456 ScafM INDEL 0007.scaffold00024 475667 1 T . scaffold9456 ScafM INDEL 0007.scaffold00024 475692 1 . 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A scaffold9456 ScafM SNP 0007.scaffold00024 475881 1 T A scaffold9456 ScafM SNP 0007.scaffold00024 475886 1 T A scaffold9456 ScafM SNP 0007.scaffold00024 475893 1 A C scaffold9456 ScafM SNP 0007.scaffold00024 475911 1 T G scaffold9456 ScafM INDEL 0007.scaffold00024 475912 7 .ACAAAG TTTTCTT scaffold9456 ScafM SNP 0007.scaffold00024 475938 1 C T scaffold9456 ScafM SNP 0007.scaffold00024 475943 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 475964 1 T G scaffold9456 ScafM SNP 0007.scaffold00024 475980 1 C A scaffold9456 ScafM SNP 0007.scaffold00024 475995 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 476010 1 T G scaffold9456 ScafM SNP 0007.scaffold00024 476015 1 G T scaffold9456 ScafM INDEL 0007.scaffold00024 476019 6 ...... TAACAG scaffold9456 ScafM INDEL 0007.scaffold00024 476021 9 ......... GGCCCAGAC scaffold9456 ScafM SNP 0007.scaffold00024 476022 1 T C scaffold9456 ScafM SNP 0007.scaffold00024 476037 1 A G scaffold9456 ScafM SNP 0007.scaffold00024 476043 1 A T scaffold9456 ScafM SNP 0007.scaffold00024 476062 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 476071 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 476152 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 476154 2 CA AT scaffold9456 ScafM SNP 0007.scaffold00024 476157 1 C T scaffold9456 ScafM SNP 0007.scaffold00024 476166 1 G A scaffold9456 ScafM SNP 0007.scaffold00024 476175 1 G C scaffold9456 ScafM SNP 0007.scaffold00024 476180 1 G T scaffold9456 ScafM SNP 0007.scaffold00024 476190 1 T G scaffold9456 ScafM SNP 0007.scaffold00024 476232 1 C A scaffold9456 ScafM SNP 0007.scaffold00024 476234 1 T G scaffold9456 ScafM SNP 0007.scaffold00024 476252 1 A C scaffold9456 ScafM SNP 0007.scaffold00024 476276 1 C T scaffold9456 ScafM SNP 0007.scaffold00024 476289 1 A G scaffold9456 ScafM SNP 0007.scaffold00024 476306 1 T G scaffold9456 ScafM SNP 0007.scaffold00024 476362 2 CA AG scaffold9456 ScafM SNP 0007.scaffold00024 476378 1 G A scaffold9456 ScafM INDEL 0007.scaffold00024 476388 1 A . scaffold9456 ScafM SNP 0007.scaffold00024 476425 1 T A scaffold9456 ScafM SNP 0007.scaffold00024 476455 1 C T scaffold9456 ScafM SNP 0007.scaffold00024 491598 2 TA CT scaffold5837 ScafM SNP 0007.scaffold00024 491612 1 T C scaffold5837 ScafM SNP 0007.scaffold00024 491614 1 C T scaffold5837 ScafM SNP 0007.scaffold00024 491633 1 C A scaffold5837 ScafM SNP 0007.scaffold00024 491683 1 T A scaffold5837 ScafM SNP 0007.scaffold00024 491718 1 G A scaffold5837 ScafM SNP 0007.scaffold00024 491720 1 G T scaffold5837 ScafM SNP 0007.scaffold00024 491747 1 C A scaffold5837 ReadM SNP 0007.scaffold00024 492469 1 G A - ReadM SNP 0007.scaffold00024 494514 1 T C - ReadM SNP 0007.scaffold00024 494620 1 T A - ReadM SNP 0007.scaffold00024 495091 1 G A - ReadM SNP 0007.scaffold00024 497164 1 G A - ReadM SNP 0007.scaffold00024 497554 1 T G - ReadM SNP 0007.scaffold00024 497669 1 C T - ReadM SNP 0007.scaffold00024 498656 1 T C - ReadM SNP 0007.scaffold00024 499311 1 T A - ReadM SNP 0007.scaffold00024 499421 1 T C - ReadM SNP 0007.scaffold00024 499442 1 G A - ReadM SNP 0007.scaffold00024 499561 1 G A - ReadM SNP 0007.scaffold00024 499638 1 C G - ReadM SNP 0007.scaffold00024 499643 1 A C - ReadM SNP 0007.scaffold00024 499856 1 C A - ReadM SNP 0007.scaffold00024 499872 1 C T - ReadM SNP 0007.scaffold00024 499874 1 A G - ReadM SNP 0007.scaffold00024 501368 1 G T - ReadM SNP 0007.scaffold00024 502551 1 T C - ReadM SNP 0007.scaffold00024 505054 1 C T - ReadM SNP 0007.scaffold00024 505107 1 C T - ReadM SNP 0007.scaffold00024 505126 1 C T - ReadM SNP 0007.scaffold00024 505411 1 G A - ReadM SNP 0007.scaffold00024 505465 1 T A - ScafM INDEL 0007.scaffold00024 505501 16 AAGTTAATATAAAAGG ...............C scaffold3102 ScafM SNP 0007.scaffold00024 505518 1 G C scaffold3102 ScafM SNP 0007.scaffold00024 505535 2 AA TC scaffold3102 Both SNP 0007.scaffold00024 505593 1 C T scaffold3102 Both SNP 0007.scaffold00024 505620 1 G T scaffold3102 Both SNP 0007.scaffold00024 505644 1 T C scaffold3102 Both INDEL 0007.scaffold00024 505666 1 . C scaffold3102 ScafM SNP 0007.scaffold00024 505744 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 505746 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 505760 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 505783 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 505806 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 505822 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 505853 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 505863 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 505868 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 505885 1 A C scaffold3102 ScafM SNP 0007.scaffold00024 505921 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 505923 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 505935 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 505951 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 505957 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 505960 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 505962 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 505964 2 GG AA scaffold3102 ReadM INDEL 0007.scaffold00024 506980 1 T . - ReadM SNP 0007.scaffold00024 507530 1 G T - ReadM SNP 0007.scaffold00024 507570 1 C G - ReadM SNP 0007.scaffold00024 507586 1 C A - ReadM SNP 0007.scaffold00024 507614 1 C T - ReadM SNP 0007.scaffold00024 507701 1 G A - ReadM SNP 0007.scaffold00024 507711 1 G A - ReadM SNP 0007.scaffold00024 507765 1 C T - ReadM SNP 0007.scaffold00024 507978 1 A G - ReadM SNP 0007.scaffold00024 507986 1 C T - ReadM SNP 0007.scaffold00024 508009 1 G C - ReadM SNP 0007.scaffold00024 508085 1 C T - ReadM INDEL 0007.scaffold00024 508161 1 A . - ReadM SNP 0007.scaffold00024 508174 1 C G - ReadM SNP 0007.scaffold00024 508185 1 T C - ReadM SNP 0007.scaffold00024 508523 1 A G - ReadM SNP 0007.scaffold00024 508573 1 G T - ReadM SNP 0007.scaffold00024 508667 1 C T - ReadM INDEL 0007.scaffold00024 508676 1 . T - ReadM SNP 0007.scaffold00024 508717 1 G A - ReadM SNP 0007.scaffold00024 508815 1 A G - ReadM SNP 0007.scaffold00024 508853 1 T C - ScafM SNP 0007.scaffold00024 509556 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 509576 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 509587 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 509604 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 509613 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 509630 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 509639 1 A G scaffold3102 ScafM INDEL 0007.scaffold00024 509651 9 ......... TTCGCAAAT scaffold3102 ScafM SNP 0007.scaffold00024 509655 1 A G scaffold3102 Both SNP 0007.scaffold00024 509717 1 G A scaffold3102 Both SNP 0007.scaffold00024 509737 1 T G scaffold3102 Both SNP 0007.scaffold00024 509761 1 C T scaffold3102 Both SNP 0007.scaffold00024 509796 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 509837 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 509868 2 CG TA scaffold3102 ScafM SNP 0007.scaffold00024 509872 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 510404 2 AT CA scaffold3102 ScafM SNP 0007.scaffold00024 510423 1 G C scaffold3102 ReadM SNP 0007.scaffold00024 513816 1 T A - ReadM SNP 0007.scaffold00024 513820 1 T A - ReadM SNP 0007.scaffold00024 513858 1 G C - ReadM SNP 0007.scaffold00024 513909 1 G T - ReadM SNP 0007.scaffold00024 513936 1 A C - ReadM SNP 0007.scaffold00024 513976 1 A G - ReadM SNP 0007.scaffold00024 514076 1 A G - ReadM SNP 0007.scaffold00024 514140 1 C T - ReadM SNP 0007.scaffold00024 514142 1 G A - ReadM SNP 0007.scaffold00024 514150 1 G T - ReadM SNP 0007.scaffold00024 514409 1 G T - ReadM SNP 0007.scaffold00024 514439 1 C T - ReadM SNP 0007.scaffold00024 514552 1 G A - ReadM SNP 0007.scaffold00024 514628 1 A G - ReadM SNP 0007.scaffold00024 515027 1 G A - Both SNP 0007.scaffold00024 515094 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 515106 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 515111 1 A C scaffold3102 ScafM SNP 0007.scaffold00024 515129 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 515137 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 515154 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 515174 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 515182 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 515221 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 515239 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 515244 1 C T scaffold3102 Both SNP 0007.scaffold00024 515281 1 G C scaffold3102 Both SNP 0007.scaffold00024 515306 1 T C scaffold3102 Both SNP 0007.scaffold00024 515328 1 G A scaffold3102 Both SNP 0007.scaffold00024 515391 1 C T scaffold3102 Both SNP 0007.scaffold00024 515393 1 G A scaffold3102 Both SNP 0007.scaffold00024 515437 1 G A scaffold3102 Both SNP 0007.scaffold00024 515458 1 G A scaffold3102 Both SNP 0007.scaffold00024 515485 1 C T scaffold3102 Both SNP 0007.scaffold00024 515511 1 C T scaffold3102 ReadM SNP 0007.scaffold00024 515555 1 A T - ReadM SNP 0007.scaffold00024 515602 1 C T - ReadM SNP 0007.scaffold00024 515625 1 T C - ReadM SNP 0007.scaffold00024 515646 1 A G - ReadM SNP 0007.scaffold00024 515709 1 T G - ReadM SNP 0007.scaffold00024 515810 1 T C - ReadM SNP 0007.scaffold00024 515825 1 A G - ReadM SNP 0007.scaffold00024 515934 1 A G - ScafM INDEL 0007.scaffold00024 516027 3 ... TAG scaffold3102 ScafM INDEL 0007.scaffold00024 516028 1 . T scaffold3102 ScafM INDEL 0007.scaffold00024 516029 1 . T scaffold3102 ScafM INDEL 0007.scaffold00024 516030 1 . G scaffold3102 ScafM SNP 0007.scaffold00024 516037 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 516039 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 516051 2 CT GC scaffold3102 Both SNP 0007.scaffold00024 516151 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 516163 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 516175 1 G T scaffold3102 ScafM SNP 0007.scaffold00024 516189 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 516195 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 516205 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 516223 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 516255 1 G A scaffold3102 ScafM INDEL 0007.scaffold00024 516276 1 T . scaffold3102 ScafM SNP 0007.scaffold00024 516298 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 516304 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 516309 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 516328 1 T C scaffold3102 Both SNP 0007.scaffold00024 516373 1 T C scaffold3102 Both SNP 0007.scaffold00024 516382 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 516458 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 516479 3 GGT ATA scaffold3102 ScafM SNP 0007.scaffold00024 516496 1 T A scaffold3102 ReadM SNP 0007.scaffold00024 516571 1 T C - ReadM SNP 0007.scaffold00024 516591 1 C T - ReadM SNP 0007.scaffold00024 516725 1 C G - ReadM SNP 0007.scaffold00024 516807 1 T C - ReadM SNP 0007.scaffold00024 516813 1 C A - ScafM SNP 0007.scaffold00024 516878 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 516924 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 516927 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 516936 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 516943 1 C A scaffold3102 ScafM SNP 0007.scaffold00024 516968 1 A T scaffold3102 ScafM INDEL 0007.scaffold00024 517017 1 T . scaffold3102 ScafM SNP 0007.scaffold00024 517020 1 C T scaffold3102 ScafM INDEL 0007.scaffold00024 517035 2 GA .. scaffold3102 ScafM SNP 0007.scaffold00024 517049 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 517080 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 517094 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 517126 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 517131 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 517134 1 G C scaffold3102 ScafM SNP 0007.scaffold00024 517167 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 518796 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 518809 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 518827 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 518884 1 T A scaffold3102 ScafM INDEL 0007.scaffold00024 518947 15 TGCTTGAAACTTTCT ............... scaffold3102 ScafM SNP 0007.scaffold00024 518992 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 519000 1 T G scaffold3102 Both SNP 0007.scaffold00024 519185 1 C G scaffold3102 Both SNP 0007.scaffold00024 519205 1 T A scaffold3102 Both SNP 0007.scaffold00024 519279 1 C T scaffold3102 Both INDEL 0007.scaffold00024 519301 1 A . scaffold3102 Both SNP 0007.scaffold00024 519335 1 G A scaffold3102 Both SNP 0007.scaffold00024 519457 1 C T scaffold3102 Both SNP 0007.scaffold00024 519544 1 G A scaffold3102 Both SNP 0007.scaffold00024 519741 1 G T scaffold3102 Both SNP 0007.scaffold00024 519851 1 C T scaffold3102 Both SNP 0007.scaffold00024 520239 1 T C scaffold3102 Both SNP 0007.scaffold00024 520458 1 C T scaffold3102 Both SNP 0007.scaffold00024 520480 1 G C scaffold3102 Both SNP 0007.scaffold00024 520518 1 A T scaffold3102 Both SNP 0007.scaffold00024 520581 1 G C scaffold3102 Both SNP 0007.scaffold00024 520629 1 T C scaffold3102 Both SNP 0007.scaffold00024 520649 1 A G scaffold3102 Both SNP 0007.scaffold00024 520718 1 T C scaffold3102 Both SNP 0007.scaffold00024 520830 1 A T scaffold3102 Both SNP 0007.scaffold00024 520867 1 C T scaffold3102 Both SNP 0007.scaffold00024 520899 1 A C scaffold3102 ScafM SNP 0007.scaffold00024 520933 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 520938 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 520960 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 520970 1 A C scaffold3102 Both SNP 0007.scaffold00024 520992 1 A T scaffold3102 Both SNP 0007.scaffold00024 521004 1 A C scaffold3102 Both SNP 0007.scaffold00024 521073 1 C T scaffold3102 Both SNP 0007.scaffold00024 521142 1 G C scaffold3102 Both SNP 0007.scaffold00024 521223 1 G C scaffold3102 Both SNP 0007.scaffold00024 521316 1 G A scaffold3102 Both SNP 0007.scaffold00024 521362 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 521467 2 GT AG scaffold3102 ScafM INDEL 0007.scaffold00024 521475 3 ATG ... scaffold3102 ScafM SNP 0007.scaffold00024 521492 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 521499 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 521505 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 521522 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 521527 2 CA AG scaffold3102 Both SNP 0007.scaffold00024 521555 1 G A scaffold3102 Both SNP 0007.scaffold00024 521598 1 C T scaffold3102 ScafM INDEL 0007.scaffold00024 521637 1 . T scaffold3102 ScafM SNP 0007.scaffold00024 521643 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 521646 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 521668 1 C T scaffold3102 ScafM INDEL 0007.scaffold00024 521679 1 A . scaffold3102 ScafM SNP 0007.scaffold00024 521695 1 C G scaffold3102 ScafM INDEL 0007.scaffold00024 521697 1 . A scaffold3102 ScafM SNP 0007.scaffold00024 521713 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 521718 1 G T scaffold3102 ScafM SNP 0007.scaffold00024 521736 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 521773 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 521797 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 521800 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 521806 2 GC TA scaffold3102 ScafM SNP 0007.scaffold00024 521811 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 521814 1 G T scaffold3102 Both SNP 0007.scaffold00024 521854 1 T C scaffold3102 Both SNP 0007.scaffold00024 521888 1 A T scaffold3102 Both SNP 0007.scaffold00024 521954 1 A T scaffold3102 ScafM INDEL 0007.scaffold00024 521979 7 ATTTGTG ....... scaffold3102 Both INDEL 0007.scaffold00024 522023 1 . G scaffold3102 ScafM SNP 0007.scaffold00024 522025 1 G A scaffold3102 Both SNP 0007.scaffold00024 522043 1 T A scaffold3102 Both SNP 0007.scaffold00024 522100 1 A G scaffold3102 Both SNP 0007.scaffold00024 522129 1 G T scaffold3102 Both INDEL 0007.scaffold00024 522138 1 C . scaffold3102 ScafM SNP 0007.scaffold00024 522160 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 522187 1 G T scaffold3102 ScafM SNP 0007.scaffold00024 522208 1 A C scaffold3102 ScafM INDEL 0007.scaffold00024 522210 11 ........... AGAGCCACCTA scaffold3102 ScafM SNP 0007.scaffold00024 522238 1 G T scaffold3102 ScafM SNP 0007.scaffold00024 522242 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 522248 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 522267 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 522269 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 522308 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 522319 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 522361 1 C A scaffold3102 ScafM SNP 0007.scaffold00024 522369 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 522408 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 522415 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 522437 1 T A scaffold3102 ScafM SNP 0007.scaffold00024 522441 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 522466 1 T A scaffold3102 Both SNP 0007.scaffold00024 522483 1 C T scaffold3102 Both SNP 0007.scaffold00024 522521 1 C T scaffold3102 Both INDEL 0007.scaffold00024 522552 1 . G scaffold3102 ScafM INDEL 0007.scaffold00024 522643 7 ....... AACTTCT scaffold3102 Both SNP 0007.scaffold00024 522678 1 T A scaffold3102 Both INDEL 0007.scaffold00024 522723 1 . A scaffold3102 ScafM SNP 0007.scaffold00024 522781 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 522784 1 T C scaffold3102 ScafM SNP 0007.scaffold00024 522797 1 C A scaffold3102 ScafM INDEL 0007.scaffold00024 522802 2 CC .T scaffold3102 ScafM SNP 0007.scaffold00024 522811 1 T G scaffold3102 ScafM INDEL 0007.scaffold00024 523345 1 . A scaffold3102 ScafM SNP 0007.scaffold00024 523347 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 523376 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 523404 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 523586 1 C T scaffold3102 ReadM SNP 0007.scaffold00024 523772 1 A G - ReadM SNP 0007.scaffold00024 523782 1 A T - ReadM SNP 0007.scaffold00024 524004 1 C T - ReadM SNP 0007.scaffold00024 524066 1 G T - ReadM SNP 0007.scaffold00024 524266 1 A C - ReadM SNP 0007.scaffold00024 524302 1 G A - ScafM SNP 0007.scaffold00024 530105 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 530122 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 530140 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 530179 1 A T scaffold3102 ScafM SNP 0007.scaffold00024 530184 1 G T scaffold3102 ScafM SNP 0007.scaffold00024 530188 1 C G scaffold3102 ScafM SNP 0007.scaffold00024 531038 1 C T scaffold3102 ScafM INDEL 0007.scaffold00024 531077 8 GTTTTGTT ........ scaffold3102 ScafM INDEL 0007.scaffold00024 531086 1 G . scaffold3102 ScafM INDEL 0007.scaffold00024 531130 1 . C scaffold3102 ScafM SNP 0007.scaffold00024 531147 1 G A scaffold3102 ScafM INDEL 0007.scaffold00024 531166 3 ... ATA scaffold3102 ScafM SNP 0007.scaffold00024 531187 1 A G scaffold3102 ScafM SNP 0007.scaffold00024 531199 1 C T scaffold3102 ScafM SNP 0007.scaffold00024 531614 1 G A scaffold3102 ScafM SNP 0007.scaffold00024 531618 1 T G scaffold3102 ScafM SNP 0007.scaffold00024 531685 1 T A scaffold3102 ScafM INDEL 0007.scaffold00024 531754 1 . T scaffold3102 Both INDEL 0007.scaffold00024 532538 2 .. AG C14232347 Both SNP 0007.scaffold00024 532564 1 C A C14232347 ScafM SNP 0007.scaffold00024 532591 1 A G C14232347 Both SNP 0007.scaffold00024 532616 1 A T C14232347 Both SNP 0007.scaffold00024 532628 1 T C C14232347 Both SNP 0007.scaffold00024 532644 1 G A C14232347 Both SNP 0007.scaffold00024 532718 1 G A C14232347 Both SNP 0007.scaffold00024 532723 1 A C C14232347 Both SNP 0007.scaffold00024 532749 1 C T C14232347 Both SNP 0007.scaffold00024 532753 1 T C C14232347 Both SNP 0007.scaffold00024 532939 1 A G C14232347 Both SNP 0007.scaffold00024 533046 1 G C C14232347 Both SNP 0007.scaffold00024 533237 1 T C C14232347 Both SNP 0007.scaffold00024 533326 1 T C C14232347 Both SNP 0007.scaffold00024 533403 1 T C C14232347 Both SNP 0007.scaffold00024 533407 1 T C C14232347 Both SNP 0007.scaffold00024 533419 1 A C C14232347 Both SNP 0007.scaffold00024 533500 1 T G C14232347 Both SNP 0007.scaffold00024 533629 1 G A C14232347 Both INDEL 0007.scaffold00024 533644 1 A . C14232347 Both SNP 0007.scaffold00024 533659 1 T A C14232347 Both SNP 0007.scaffold00024 533729 1 A G C14232347 Both SNP 0007.scaffold00024 533788 1 G A C14232347 Both SNP 0007.scaffold00024 533797 1 G T C14232347 Both SNP 0007.scaffold00024 534023 1 C G C14232347 Both SNP 0007.scaffold00024 534118 1 G A C14232347 Both SNP 0007.scaffold00024 534143 1 C T C14232347 Both SNP 0007.scaffold00024 534254 1 C T C14232347 ReadM SNP 0007.scaffold00024 534521 1 T C - ReadM SNP 0007.scaffold00024 534557 1 T C - ReadM SNP 0007.scaffold00024 534659 1 C T - ReadM SNP 0007.scaffold00024 534783 1 A C - ReadM SNP 0007.scaffold00024 534787 1 C T - ReadM SNP 0007.scaffold00024 534938 1 A G - ReadM SNP 0007.scaffold00024 535028 1 A T - ReadM SNP 0007.scaffold00024 535142 1 T C - ReadM SNP 0007.scaffold00024 535301 1 G A - ReadM SNP 0007.scaffold00024 535334 1 A T - Both SNP 0007.scaffold00024 535383 1 T C C14232347 Both SNP 0007.scaffold00024 535401 1 C T C14232347 Both SNP 0007.scaffold00024 535466 1 A T C14232347 Both SNP 0007.scaffold00024 535475 1 T C C14232347 Both SNP 0007.scaffold00024 535616 1 C T C14232347 Both SNP 0007.scaffold00024 535674 1 C G C14232347 Both SNP 0007.scaffold00024 535788 1 T C C14232347 Both SNP 0007.scaffold00024 535826 1 A G C14232347 ReadM SNP 0007.scaffold00024 535983 1 A G - ReadM SNP 0007.scaffold00024 536015 1 C T - ReadM SNP 0007.scaffold00024 536039 1 T C - ReadM SNP 0007.scaffold00024 536048 1 A T - ReadM SNP 0007.scaffold00024 536177 1 A C - ReadM SNP 0007.scaffold00024 536196 1 A C - ReadM SNP 0007.scaffold00024 536239 1 T C - ReadM SNP 0007.scaffold00024 536275 1 T C - Both SNP 0007.scaffold00024 536468 1 G A C14232347 Both SNP 0007.scaffold00024 536578 1 A G C14232347 Both SNP 0007.scaffold00024 536698 1 A G C14232347 Both SNP 0007.scaffold00024 536750 1 C A C14232347 Both SNP 0007.scaffold00024 536771 1 T C C14232347 ScafM SNP 0007.scaffold00024 536843 1 A C C14232347 ScafM SNP 0007.scaffold00024 536848 1 A G C14232347 Both SNP 0007.scaffold00024 536852 1 C T C14232347 Both SNP 0007.scaffold00024 536923 1 T C C14232347 Both SNP 0007.scaffold00024 536984 1 A G C14232347 ScafM SNP 0007.scaffold00024 538057 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 538061 1 C G scaffold9253 ScafM SNP 0007.scaffold00024 538076 1 C A scaffold9253 ScafM SNP 0007.scaffold00024 538099 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 538127 1 A T scaffold9253 ScafM SNP 0007.scaffold00024 538149 1 A C scaffold9253 ScafM SNP 0007.scaffold00024 538177 1 A C scaffold9253 ScafM SNP 0007.scaffold00024 538183 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 538241 2 TT AG scaffold9253 ScafM SNP 0007.scaffold00024 538246 1 A T scaffold9253 ScafM SNP 0007.scaffold00024 538276 1 C T scaffold9253 ScafM INDEL 0007.scaffold00024 538295 2 .. AT scaffold9253 ScafM SNP 0007.scaffold00024 538311 1 A C scaffold9253 ScafM SNP 0007.scaffold00024 538330 1 G T scaffold9253 ScafM SNP 0007.scaffold00024 538375 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 538468 1 T A scaffold9253 ScafM INDEL 0007.scaffold00024 538483 3 TGA ... scaffold9253 ScafM INDEL 0007.scaffold00024 538505 18 GCTATACGTTCCTTAGGG .................. scaffold9253 Both SNP 0007.scaffold00024 538577 1 T G scaffold9253 Both SNP 0007.scaffold00024 538585 1 C T scaffold9253 Both SNP 0007.scaffold00024 538693 1 A C scaffold9253 Both SNP 0007.scaffold00024 538704 1 C T scaffold9253 Both SNP 0007.scaffold00024 538714 1 G A scaffold9253 ScafM INDEL 0007.scaffold00024 538743 1 . A scaffold9253 ScafM SNP 0007.scaffold00024 538747 1 A G scaffold9253 ScafM INDEL 0007.scaffold00024 538749 1 A . scaffold9253 Both SNP 0007.scaffold00024 538775 1 C T scaffold9253 Both SNP 0007.scaffold00024 538849 1 C T scaffold9253 Both SNP 0007.scaffold00024 538855 1 T G scaffold9253 Both SNP 0007.scaffold00024 538946 1 T G scaffold9253 Both SNP 0007.scaffold00024 539010 1 A T scaffold9253 Both SNP 0007.scaffold00024 539021 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 539035 1 C A scaffold9253 ReadM SNP 0007.scaffold00024 539257 1 C T - ReadM SNP 0007.scaffold00024 539322 1 A G - ReadM SNP 0007.scaffold00024 539334 1 G A - ReadM SNP 0007.scaffold00024 539387 1 G A - ReadM SNP 0007.scaffold00024 539479 1 T C - ReadM SNP 0007.scaffold00024 539508 1 T C - ReadM INDEL 0007.scaffold00024 539546 1 . A - ReadM SNP 0007.scaffold00024 539574 1 A G - ReadM SNP 0007.scaffold00024 539646 1 G A - ReadM SNP 0007.scaffold00024 539700 1 T G - ReadM SNP 0007.scaffold00024 539727 1 G A - ReadM SNP 0007.scaffold00024 539731 1 C G - ReadM SNP 0007.scaffold00024 539772 1 A G - ReadM SNP 0007.scaffold00024 539887 1 T G - Both INDEL 0007.scaffold00024 539920 1 T . scaffold9253 Both SNP 0007.scaffold00024 540032 1 A T scaffold9253 Both SNP 0007.scaffold00024 540053 1 C T scaffold9253 ReadM SNP 0007.scaffold00024 540149 1 G A - ReadM SNP 0007.scaffold00024 540160 1 T C - ReadM SNP 0007.scaffold00024 540171 1 G T - Both SNP 0007.scaffold00024 540323 1 G C scaffold9253 ScafM SNP 0007.scaffold00024 540354 1 G C scaffold9253 Both SNP 0007.scaffold00024 540755 1 A G scaffold9253 Both SNP 0007.scaffold00024 540789 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 540862 1 C G scaffold9253 ScafM SNP 0007.scaffold00024 540915 1 G A scaffold9253 ScafM INDEL 0007.scaffold00024 540948 1 T . scaffold9253 ScafM INDEL 0007.scaffold00024 540966 1 T . scaffold9253 ReadM SNP 0007.scaffold00024 541363 1 T C - ReadM SNP 0007.scaffold00024 541443 1 A T - ReadM SNP 0007.scaffold00024 541586 1 A G - ReadM INDEL 0007.scaffold00024 541644 1 . A - ReadM SNP 0007.scaffold00024 541724 1 G C - ReadM SNP 0007.scaffold00024 541737 1 T C - ReadM SNP 0007.scaffold00024 541798 1 G A - ScafM SNP 0007.scaffold00024 541847 1 C A scaffold9253 ScafM SNP 0007.scaffold00024 541851 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 541861 1 G T scaffold9253 ReadM SNP 0007.scaffold00024 541923 1 A C - ReadM SNP 0007.scaffold00024 541944 1 A C - ReadM SNP 0007.scaffold00024 541976 1 C T - ReadM SNP 0007.scaffold00024 541992 1 C T - ReadM SNP 0007.scaffold00024 542018 1 G A - ReadM SNP 0007.scaffold00024 542039 1 A C - ReadM SNP 0007.scaffold00024 542154 1 C G - ReadM SNP 0007.scaffold00024 542208 1 T A - ReadM SNP 0007.scaffold00024 542217 1 C T - ReadM SNP 0007.scaffold00024 542294 1 G A - ReadM SNP 0007.scaffold00024 542404 1 G C - ReadM SNP 0007.scaffold00024 542459 1 A C - ReadM SNP 0007.scaffold00024 542536 1 C T - ReadM SNP 0007.scaffold00024 542550 1 G C - ReadM SNP 0007.scaffold00024 542566 1 G A - ReadM SNP 0007.scaffold00024 542613 1 G A - ReadM SNP 0007.scaffold00024 542676 1 G C - ReadM SNP 0007.scaffold00024 542686 1 A T - ReadM SNP 0007.scaffold00024 542712 1 C T - ReadM SNP 0007.scaffold00024 542775 1 A G - ReadM SNP 0007.scaffold00024 542790 1 G A - ReadM INDEL 0007.scaffold00024 542835 1 . A - ReadM SNP 0007.scaffold00024 542855 1 A C - ReadM SNP 0007.scaffold00024 543062 1 G A - ReadM INDEL 0007.scaffold00024 543065 1 A . - ReadM SNP 0007.scaffold00024 543139 1 G T - ReadM SNP 0007.scaffold00024 543147 1 G A - ReadM SNP 0007.scaffold00024 543156 1 A G - ReadM SNP 0007.scaffold00024 543191 1 G A - ReadM SNP 0007.scaffold00024 543249 1 G A - ReadM SNP 0007.scaffold00024 543261 1 T G - ReadM SNP 0007.scaffold00024 543453 1 T C - ReadM SNP 0007.scaffold00024 543505 1 T G - ReadM SNP 0007.scaffold00024 543624 1 A T - Both SNP 0007.scaffold00024 543647 1 G A scaffold9253 Both SNP 0007.scaffold00024 543658 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 543733 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 543738 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 543751 1 T C scaffold9253 Both SNP 0007.scaffold00024 543779 1 T C scaffold9253 Both SNP 0007.scaffold00024 543790 1 G C scaffold9253 Both SNP 0007.scaffold00024 543856 1 T C scaffold9253 Both SNP 0007.scaffold00024 543878 1 A G scaffold9253 Both SNP 0007.scaffold00024 543917 1 C T scaffold9253 ReadM SNP 0007.scaffold00024 544047 1 G C - Both SNP 0007.scaffold00024 544135 1 C T scaffold9253 ReadM SNP 0007.scaffold00024 544179 2 CA TG - ReadM SNP 0007.scaffold00024 544256 1 C T - ScafM INDEL 0007.scaffold00024 545124 5 ..... TTTTT scaffold9253 ScafM SNP 0007.scaffold00024 545163 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 545168 1 A C scaffold9253 ScafM SNP 0007.scaffold00024 545205 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 545223 1 G T scaffold9253 ScafM SNP 0007.scaffold00024 545240 2 GA AG scaffold9253 ScafM SNP 0007.scaffold00024 545259 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 545270 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 545290 1 C T scaffold9253 ScafM INDEL 0007.scaffold00024 545339 2 GG .. scaffold9253 ScafM INDEL 0007.scaffold00024 545345 4 TGCT .... scaffold9253 ScafM INDEL 0007.scaffold00024 545355 12 GCAGAGGTTGCT ............ scaffold9253 ScafM SNP 0007.scaffold00024 545384 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 545399 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 545410 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 545412 2 CC TT scaffold9253 ScafM INDEL 0007.scaffold00024 545421 13 ............. GCGGTCGTTGCTG scaffold9253 ScafM SNP 0007.scaffold00024 545444 1 T G scaffold9253 ScafM INDEL 0007.scaffold00024 545478 1 C . scaffold9253 ScafM SNP 0007.scaffold00024 545483 1 G T scaffold9253 ReadM SNP 0007.scaffold00024 546347 1 G A - ReadM SNP 0007.scaffold00024 546434 1 G A - ReadM SNP 0007.scaffold00024 554076 1 C T - ReadM SNP 0007.scaffold00024 554515 1 C T - ReadM SNP 0007.scaffold00024 554532 1 A G - ReadM SNP 0007.scaffold00024 554573 1 C T - ReadM SNP 0007.scaffold00024 554604 1 C T - ReadM SNP 0007.scaffold00024 554732 1 C A - ReadM SNP 0007.scaffold00024 554761 1 C T - ReadM SNP 0007.scaffold00024 554887 1 G T - ReadM SNP 0007.scaffold00024 554896 1 A G - ReadM SNP 0007.scaffold00024 554906 1 C T - Both SNP 0007.scaffold00024 554965 1 G A scaffold9253 Both SNP 0007.scaffold00024 554982 1 C A scaffold9253 ScafM SNP 0007.scaffold00024 555022 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 555035 1 G A scaffold9253 ScafM INDEL 0007.scaffold00024 555043 15 CACAATTTTAATGAC ............... scaffold9253 ScafM SNP 0007.scaffold00024 555071 1 T C scaffold9253 Both SNP 0007.scaffold00024 555141 1 T C scaffold9253 Both INDEL 0007.scaffold00024 555161 1 . T scaffold9253 Both SNP 0007.scaffold00024 555279 1 A G scaffold9253 Both SNP 0007.scaffold00024 555293 1 A C scaffold9253 Both SNP 0007.scaffold00024 555313 1 T C scaffold9253 Both SNP 0007.scaffold00024 555383 1 A G scaffold9253 Both SNP 0007.scaffold00024 555412 1 T C scaffold9253 Both SNP 0007.scaffold00024 555418 1 A G scaffold9253 Both SNP 0007.scaffold00024 555465 1 A G scaffold9253 ScafM INDEL 0007.scaffold00024 555510 2 CA .G scaffold9253 ScafM INDEL 0007.scaffold00024 555523 1 . G scaffold9253 ScafM SNP 0007.scaffold00024 555574 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 555586 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 555596 1 C G scaffold9253 ScafM SNP 0007.scaffold00024 555611 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 555641 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 555663 1 G T scaffold9253 Both INDEL 0007.scaffold00024 555680 1 . T scaffold9253 Both SNP 0007.scaffold00024 555701 1 G T scaffold9253 Both SNP 0007.scaffold00024 555792 1 T G scaffold9253 ReadM SNP 0007.scaffold00024 555822 1 A G - ReadM SNP 0007.scaffold00024 556011 1 A G - ReadM SNP 0007.scaffold00024 556114 1 T A - ReadM SNP 0007.scaffold00024 556312 1 C T - ReadM SNP 0007.scaffold00024 556342 1 G C - ReadM SNP 0007.scaffold00024 556409 1 A T - ReadM INDEL 0007.scaffold00024 556419 1 . T - ReadM SNP 0007.scaffold00024 556432 1 T A - Both SNP 0007.scaffold00024 556536 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 556597 2 CA TG scaffold9253 ReadM SNP 0007.scaffold00024 556743 1 G T - ReadM SNP 0007.scaffold00024 556758 1 T C - ScafM INDEL 0007.scaffold00024 556849 1 C . scaffold9253 ScafM SNP 0007.scaffold00024 556869 2 AT CC scaffold9253 ScafM SNP 0007.scaffold00024 556884 1 A T scaffold9253 Both INDEL 0007.scaffold00024 556903 1 . C scaffold9253 Both SNP 0007.scaffold00024 556978 1 G T scaffold9253 Both SNP 0007.scaffold00024 557022 1 G T scaffold9253 Both SNP 0007.scaffold00024 557025 1 C A scaffold9253 Both SNP 0007.scaffold00024 557082 1 A T scaffold9253 Both SNP 0007.scaffold00024 557112 1 G A scaffold9253 Both INDEL 0007.scaffold00024 557118 1 T . scaffold9253 Both SNP 0007.scaffold00024 557150 1 G T scaffold9253 Both SNP 0007.scaffold00024 557307 1 C A scaffold9253 ScafM SNP 0007.scaffold00024 557411 2 GT CA scaffold9253 ScafM SNP 0007.scaffold00024 557415 1 C T scaffold9253 ScafM INDEL 0007.scaffold00024 557483 1 . A scaffold9253 ScafM SNP 0007.scaffold00024 557526 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 557545 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 557752 1 A C scaffold9253 ScafM INDEL 0007.scaffold00024 557768 2 CC .G scaffold9253 ScafM SNP 0007.scaffold00024 557778 1 T A scaffold9253 ScafM SNP 0007.scaffold00024 557823 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 557930 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 557937 1 G T scaffold9253 ScafM SNP 0007.scaffold00024 557992 1 G A scaffold9253 ScafM INDEL 0007.scaffold00024 558004 1 . G scaffold9253 ScafM SNP 0007.scaffold00024 558006 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 558036 2 GA CG scaffold9253 ScafM SNP 0007.scaffold00024 558040 1 G T scaffold9253 ScafM SNP 0007.scaffold00024 558052 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 558076 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 558087 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 558101 1 A C scaffold9253 ScafM INDEL 0007.scaffold00024 558108 1 . G scaffold9253 ScafM INDEL 0007.scaffold00024 558168 1 T . scaffold9253 ScafM SNP 0007.scaffold00024 558196 1 G C scaffold9253 ScafM SNP 0007.scaffold00024 558202 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 558318 1 T G scaffold9253 Both SNP 0007.scaffold00024 558326 1 G A scaffold9253 Both SNP 0007.scaffold00024 558340 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 558639 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 558651 1 T G scaffold9253 ScafM SNP 0007.scaffold00024 558682 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 558700 1 A G scaffold9253 Both SNP 0007.scaffold00024 558711 1 G C scaffold9253 Both SNP 0007.scaffold00024 558738 1 G C scaffold9253 ReadM SNP 0007.scaffold00024 558789 1 G A - ReadM SNP 0007.scaffold00024 558812 1 T C - Both SNP 0007.scaffold00024 559056 1 C T scaffold9253 Both SNP 0007.scaffold00024 559137 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559187 1 A C scaffold9253 ScafM SNP 0007.scaffold00024 559190 1 A T scaffold9253 ScafM SNP 0007.scaffold00024 559222 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 559237 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 559247 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559255 1 A G scaffold9253 ScafM INDEL 0007.scaffold00024 559289 1 . C scaffold9253 ScafM INDEL 0007.scaffold00024 559295 1 A . scaffold9253 ScafM INDEL 0007.scaffold00024 559320 1 A . scaffold9253 ScafM SNP 0007.scaffold00024 559340 1 T A scaffold9253 ScafM SNP 0007.scaffold00024 559393 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559411 1 T G scaffold9253 ScafM INDEL 0007.scaffold00024 559419 1 . A scaffold9253 ScafM SNP 0007.scaffold00024 559424 1 T A scaffold9253 ScafM SNP 0007.scaffold00024 559439 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559471 1 C G scaffold9253 ScafM SNP 0007.scaffold00024 559483 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 559542 1 G A scaffold9253 ScafM SNP 0007.scaffold00024 559664 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 559684 2 GC AG scaffold9253 ScafM SNP 0007.scaffold00024 559696 1 T C scaffold9253 ScafM SNP 0007.scaffold00024 559711 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559714 1 A G scaffold9253 Both SNP 0007.scaffold00024 559763 1 A G scaffold9253 ScafM SNP 0007.scaffold00024 559894 1 C T scaffold9253 ScafM SNP 0007.scaffold00024 559920 1 C T scaffold9253 ReadM SNP 0007.scaffold00024 563518 1 C A - ReadM SNP 0007.scaffold00024 563857 1 G A - ReadM SNP 0007.scaffold00024 564039 1 G A - ReadM SNP 0007.scaffold00024 564043 1 C T - ReadM SNP 0007.scaffold00024 564115 1 T C - ReadM SNP 0007.scaffold00024 564164 1 T G - ReadM SNP 0007.scaffold00024 564192 1 G C - ReadM SNP 0007.scaffold00024 564265 1 C T - ReadM SNP 0007.scaffold00024 564298 1 G C - ReadM SNP 0007.scaffold00024 564360 1 G A - ReadM SNP 0007.scaffold00024 564470 1 T C - ReadM SNP 0007.scaffold00024 564582 1 G A - ReadM SNP 0007.scaffold00024 564585 1 G C - ReadM SNP 0007.scaffold00024 564633 1 C T - ReadM SNP 0007.scaffold00024 564636 1 A C - ReadM SNP 0007.scaffold00024 564779 1 A G - ReadM SNP 0007.scaffold00024 565005 1 T G - ReadM SNP 0007.scaffold00024 565097 1 G A - ReadM SNP 0007.scaffold00024 565111 1 A T - ReadM SNP 0007.scaffold00024 565307 1 C G - ReadM SNP 0007.scaffold00024 565490 1 C T - ReadM SNP 0007.scaffold00024 565597 1 C T - ReadM SNP 0007.scaffold00024 566021 1 A G - ReadM SNP 0007.scaffold00024 566486 1 C T - ReadM SNP 0007.scaffold00024 566602 1 A C - ReadM SNP 0007.scaffold00024 566677 1 G A - ReadM SNP 0007.scaffold00024 566706 1 T G - ReadM SNP 0007.scaffold00024 566747 1 T G - ScafM SNP 0007.scaffold00024 578687 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 578697 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 578758 1 G C scaffold13433 ScafM SNP 0007.scaffold00024 578820 1 C T scaffold13433 ReadM SNP 0007.scaffold00024 578884 1 G A - ReadM SNP 0007.scaffold00024 578886 1 C A - ReadM SNP 0007.scaffold00024 579066 1 C T - Both SNP 0007.scaffold00024 579256 1 T C scaffold13433 Both SNP 0007.scaffold00024 579278 1 G A scaffold13433 Both SNP 0007.scaffold00024 579344 1 C A scaffold13433 Both SNP 0007.scaffold00024 579356 1 A C scaffold13433 Both SNP 0007.scaffold00024 579384 1 G C scaffold13433 ScafM INDEL 0007.scaffold00024 579417 2 TA .G scaffold13433 ScafM SNP 0007.scaffold00024 579463 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 579482 1 T C scaffold13433 Both SNP 0007.scaffold00024 579491 1 A T scaffold13433 Both SNP 0007.scaffold00024 579519 1 A C scaffold13433 Both SNP 0007.scaffold00024 579565 1 G A scaffold13433 Both SNP 0007.scaffold00024 579624 1 G A scaffold13433 Both SNP 0007.scaffold00024 579685 1 T A scaffold13433 Both SNP 0007.scaffold00024 579694 1 C T scaffold13433 Both INDEL 0007.scaffold00024 579740 1 C . scaffold13433 Both SNP 0007.scaffold00024 579890 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 580107 1 T C - ReadM SNP 0007.scaffold00024 580115 1 C T - ReadM SNP 0007.scaffold00024 580182 1 A G - ReadM SNP 0007.scaffold00024 580213 1 T A - ReadM SNP 0007.scaffold00024 580252 1 G A - ReadM SNP 0007.scaffold00024 580331 1 A C - ReadM SNP 0007.scaffold00024 580370 1 G T - ReadM SNP 0007.scaffold00024 580372 1 C T - ReadM SNP 0007.scaffold00024 580404 1 T G - ReadM SNP 0007.scaffold00024 580454 1 G C - ReadM SNP 0007.scaffold00024 580472 1 C T - ReadM SNP 0007.scaffold00024 580531 1 G A - ReadM SNP 0007.scaffold00024 580602 1 T C - ReadM SNP 0007.scaffold00024 580744 1 G A - ReadM INDEL 0007.scaffold00024 580762 1 T . - ScafM SNP 0007.scaffold00024 581240 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 581273 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 581300 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 581348 1 G A scaffold13433 ScafM INDEL 0007.scaffold00024 581358 1 A . scaffold13433 ScafM SNP 0007.scaffold00024 581431 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 581443 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 581470 1 T A scaffold13433 ScafM INDEL 0007.scaffold00024 581542 4 AAAA .... scaffold13433 ScafM SNP 0007.scaffold00024 581547 1 G T scaffold13433 Both SNP 0007.scaffold00024 581621 1 A T scaffold13433 Both SNP 0007.scaffold00024 581632 1 T C scaffold13433 Both SNP 0007.scaffold00024 581674 1 A G scaffold13433 Both SNP 0007.scaffold00024 581716 1 C T scaffold13433 Both SNP 0007.scaffold00024 581741 1 G A scaffold13433 Both SNP 0007.scaffold00024 581776 1 G C scaffold13433 Both SNP 0007.scaffold00024 581842 1 G C scaffold13433 Both SNP 0007.scaffold00024 581910 1 G C scaffold13433 ScafM SNP 0007.scaffold00024 581916 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 581927 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 581953 1 A T scaffold13433 ScafM SNP 0007.scaffold00024 581969 1 G T scaffold13433 ScafM SNP 0007.scaffold00024 581997 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 582001 1 A T scaffold13433 ScafM SNP 0007.scaffold00024 582033 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 582037 1 A T scaffold13433 Both SNP 0007.scaffold00024 582051 1 T C scaffold13433 ReadM SNP 0007.scaffold00024 582104 1 C T - ReadM SNP 0007.scaffold00024 582190 1 G A - ReadM SNP 0007.scaffold00024 582238 1 C G - ReadM SNP 0007.scaffold00024 582272 1 T C - ReadM SNP 0007.scaffold00024 582277 1 C A - Both SNP 0007.scaffold00024 582477 1 G A scaffold13433 Both SNP 0007.scaffold00024 582517 1 T A scaffold13433 Both SNP 0007.scaffold00024 582605 1 A T scaffold13433 Both SNP 0007.scaffold00024 582626 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 582651 1 A T scaffold13433 ScafM SNP 0007.scaffold00024 582656 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 582683 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 582687 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 582694 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 582724 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 582747 1 T A scaffold13433 ScafM INDEL 0007.scaffold00024 582750 1 . A scaffold13433 ScafM SNP 0007.scaffold00024 582764 1 C T scaffold13433 ScafM INDEL 0007.scaffold00024 582784 1 . G scaffold13433 ScafM SNP 0007.scaffold00024 582828 2 CG TA scaffold13433 ScafM SNP 0007.scaffold00024 582861 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 582871 2 GC AT scaffold13433 ScafM SNP 0007.scaffold00024 582884 2 AG GT scaffold13433 ScafM SNP 0007.scaffold00024 582892 1 G A scaffold13433 Both SNP 0007.scaffold00024 582983 1 C T scaffold13433 Both SNP 0007.scaffold00024 582993 1 A G scaffold13433 Both SNP 0007.scaffold00024 583024 1 C A scaffold13433 Both SNP 0007.scaffold00024 583044 1 T A scaffold13433 Both SNP 0007.scaffold00024 583196 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 583220 1 G T - ReadM SNP 0007.scaffold00024 583305 1 G A - ReadM SNP 0007.scaffold00024 583332 1 A T - ReadM SNP 0007.scaffold00024 583403 1 C A - ReadM SNP 0007.scaffold00024 583430 1 G A - ReadM SNP 0007.scaffold00024 583490 1 C T - ReadM SNP 0007.scaffold00024 583544 1 A G - ReadM SNP 0007.scaffold00024 583572 1 T C - ReadM SNP 0007.scaffold00024 583700 1 G C - ReadM SNP 0007.scaffold00024 583721 1 G A - ReadM SNP 0007.scaffold00024 583844 1 C T - ReadM SNP 0007.scaffold00024 583863 1 C A - ReadM SNP 0007.scaffold00024 583906 1 C T - ReadM SNP 0007.scaffold00024 583972 1 C T - ReadM SNP 0007.scaffold00024 583977 1 C A - ReadM SNP 0007.scaffold00024 584002 1 A G - ReadM SNP 0007.scaffold00024 584254 1 C T - ReadM SNP 0007.scaffold00024 584304 1 A C - ReadM SNP 0007.scaffold00024 584338 1 C T - ReadM SNP 0007.scaffold00024 584351 1 T A - ReadM SNP 0007.scaffold00024 584398 1 C A - ReadM INDEL 0007.scaffold00024 584463 1 . C - ReadM SNP 0007.scaffold00024 584490 1 G C - ReadM SNP 0007.scaffold00024 584511 1 T A - ReadM SNP 0007.scaffold00024 584522 1 A C - ReadM SNP 0007.scaffold00024 584621 1 C T - ReadM INDEL 0007.scaffold00024 584708 1 . A - ReadM SNP 0007.scaffold00024 584720 1 A G - ReadM SNP 0007.scaffold00024 584745 1 C A - ReadM SNP 0007.scaffold00024 584797 1 C T - ReadM SNP 0007.scaffold00024 584826 1 G A - ReadM SNP 0007.scaffold00024 584857 1 G A - ReadM SNP 0007.scaffold00024 584971 1 G A - ReadM SNP 0007.scaffold00024 584983 1 G A - ReadM SNP 0007.scaffold00024 585080 1 C T - ReadM SNP 0007.scaffold00024 585092 1 A G - ReadM SNP 0007.scaffold00024 585128 1 A T - ReadM SNP 0007.scaffold00024 585185 1 G A - ReadM INDEL 0007.scaffold00024 585213 1 . A - ReadM SNP 0007.scaffold00024 585225 1 G T - ReadM SNP 0007.scaffold00024 585274 1 T C - ReadM SNP 0007.scaffold00024 585422 1 G A - ReadM SNP 0007.scaffold00024 585581 1 T C - ReadM SNP 0007.scaffold00024 585676 1 A C - ReadM SNP 0007.scaffold00024 585708 1 T C - ReadM SNP 0007.scaffold00024 585713 1 G A - ReadM SNP 0007.scaffold00024 585738 1 T C - ReadM SNP 0007.scaffold00024 585830 1 A C - ReadM SNP 0007.scaffold00024 585865 1 C T - ReadM SNP 0007.scaffold00024 585895 1 A G - ReadM INDEL 0007.scaffold00024 585992 1 . T - ReadM SNP 0007.scaffold00024 586035 1 T C - ReadM SNP 0007.scaffold00024 586068 1 A T - ReadM SNP 0007.scaffold00024 586121 1 A G - ReadM SNP 0007.scaffold00024 586125 1 A G - ReadM SNP 0007.scaffold00024 586133 1 C T - ReadM SNP 0007.scaffold00024 586260 1 T A - ReadM SNP 0007.scaffold00024 586320 1 A T - ReadM SNP 0007.scaffold00024 586373 1 G A - ReadM SNP 0007.scaffold00024 586395 1 T C - ReadM SNP 0007.scaffold00024 586418 1 A C - ReadM SNP 0007.scaffold00024 586592 1 T C - ReadM SNP 0007.scaffold00024 586687 1 G T - ReadM SNP 0007.scaffold00024 586727 1 A G - ReadM SNP 0007.scaffold00024 586730 1 G A - ReadM SNP 0007.scaffold00024 586764 1 C T - ReadM SNP 0007.scaffold00024 586834 1 C G - ReadM SNP 0007.scaffold00024 586867 1 C A - ReadM SNP 0007.scaffold00024 586872 1 A T - ReadM SNP 0007.scaffold00024 587171 1 A G - ReadM INDEL 0007.scaffold00024 587187 1 . C - ReadM SNP 0007.scaffold00024 587219 1 G A - ReadM SNP 0007.scaffold00024 587306 1 C T - ReadM SNP 0007.scaffold00024 587348 1 A T - ReadM SNP 0007.scaffold00024 587478 1 G A - Both INDEL 0007.scaffold00024 587599 2 .. CA scaffold13433 ScafM SNP 0007.scaffold00024 587600 1 G A scaffold13433 Both SNP 0007.scaffold00024 587698 1 T C scaffold13433 Both SNP 0007.scaffold00024 587730 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 587765 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 587767 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 587787 1 T G scaffold13433 Both SNP 0007.scaffold00024 587815 1 T C scaffold13433 Both SNP 0007.scaffold00024 587857 1 T G scaffold13433 Both SNP 0007.scaffold00024 587874 1 C T scaffold13433 Both SNP 0007.scaffold00024 587924 1 C T scaffold13433 Both SNP 0007.scaffold00024 587930 1 A G scaffold13433 ScafM INDEL 0007.scaffold00024 588037 22 ...................... CAAGATCAAGCAAGTCCGCGTT scaffold13433 ScafM INDEL 0007.scaffold00024 588039 11 ........... CCAACAAGCAT scaffold13433 ScafM INDEL 0007.scaffold00024 588040 1 . C scaffold13433 ScafM SNP 0007.scaffold00024 588098 1 T A scaffold13433 Both SNP 0007.scaffold00024 588108 1 T G scaffold13433 Both SNP 0007.scaffold00024 588122 1 T A scaffold13433 Both SNP 0007.scaffold00024 588165 1 G A scaffold13433 Both SNP 0007.scaffold00024 588209 1 C A scaffold13433 Both SNP 0007.scaffold00024 588463 1 C A scaffold13433 Both SNP 0007.scaffold00024 588501 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 588551 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 588597 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 588604 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 588611 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 588616 1 A C scaffold13433 ScafM INDEL 0007.scaffold00024 588625 5 ..... AAAAA scaffold13433 ScafM SNP 0007.scaffold00024 588634 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 588667 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 588725 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 588728 1 G A scaffold13433 Both SNP 0007.scaffold00024 588739 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 588797 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 588801 1 T G scaffold13433 Both SNP 0007.scaffold00024 588817 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 588849 1 A C - ReadM SNP 0007.scaffold00024 589026 1 G C - ReadM SNP 0007.scaffold00024 589042 1 C T - ReadM SNP 0007.scaffold00024 589195 1 C T - Both SNP 0007.scaffold00024 589254 1 C T scaffold13433 Both SNP 0007.scaffold00024 589259 1 C T scaffold13433 ReadM SNP 0007.scaffold00024 589567 1 T C - ReadM SNP 0007.scaffold00024 589660 1 A C - ScafM SNP 0007.scaffold00024 589706 1 G A scaffold13433 ScafM INDEL 0007.scaffold00024 589709 1 . C scaffold13433 Both SNP 0007.scaffold00024 589850 1 T C scaffold13433 Both SNP 0007.scaffold00024 589865 1 G A scaffold13433 ScafM INDEL 0007.scaffold00024 589967 16 GAAACGAACCCGACCG ................ scaffold13433 ScafM SNP 0007.scaffold00024 590036 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 590073 1 C A scaffold13433 ScafM INDEL 0007.scaffold00024 590294 4 ATAT .... scaffold13433 ScafM SNP 0007.scaffold00024 590550 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 590594 1 A G scaffold13433 Both SNP 0007.scaffold00024 590803 1 T A scaffold13433 Both SNP 0007.scaffold00024 590808 1 G C scaffold13433 Both SNP 0007.scaffold00024 590914 1 C G scaffold13433 Both SNP 0007.scaffold00024 590931 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 590978 1 C G scaffold13433 ScafM SNP 0007.scaffold00024 590999 1 A T scaffold13433 ScafM SNP 0007.scaffold00024 591008 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 591016 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 591023 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 591041 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 591048 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 591064 1 T C scaffold13433 ScafM INDEL 0007.scaffold00024 591185 22 CATTAATATCTTTGATAAAAGA ...................... scaffold13433 ScafM INDEL 0007.scaffold00024 591210 13 GATATCTTCATAT ............. scaffold13433 ScafM INDEL 0007.scaffold00024 591228 14 GTGTAAGTTGATAG .............. scaffold13433 ScafM INDEL 0007.scaffold00024 591245 11 GAATATGTAAG ........... scaffold13433 ScafM INDEL 0007.scaffold00024 591258 12 AAGTTCAAGAAA ............ scaffold13433 ScafM INDEL 0007.scaffold00024 591273 1 G . scaffold13433 ScafM SNP 0007.scaffold00024 591294 1 T A scaffold13433 Both SNP 0007.scaffold00024 591407 1 A T scaffold13433 Both SNP 0007.scaffold00024 591422 1 T C scaffold13433 Both SNP 0007.scaffold00024 591469 1 A G scaffold13433 Both SNP 0007.scaffold00024 591570 1 T G scaffold13433 Both SNP 0007.scaffold00024 591778 1 C T scaffold13433 Both SNP 0007.scaffold00024 591879 1 C A scaffold13433 Both SNP 0007.scaffold00024 592193 1 G A scaffold13433 Both SNP 0007.scaffold00024 592320 1 G T scaffold13433 ScafM SNP 0007.scaffold00024 592376 2 CG AT scaffold13433 Both SNP 0007.scaffold00024 592564 1 G T scaffold13433 Both INDEL 0007.scaffold00024 592949 1 T . scaffold13433 Both SNP 0007.scaffold00024 593099 1 G T scaffold13433 Both INDEL 0007.scaffold00024 593110 1 A . scaffold13433 Both SNP 0007.scaffold00024 593242 1 C T scaffold13433 ReadM SNP 0007.scaffold00024 593517 1 T C - ReadM SNP 0007.scaffold00024 593543 1 A T - ReadM SNP 0007.scaffold00024 593660 1 T C - ReadM SNP 0007.scaffold00024 593887 1 C G - ReadM SNP 0007.scaffold00024 593997 1 A C - ReadM SNP 0007.scaffold00024 593999 1 A G - ReadM SNP 0007.scaffold00024 594299 1 T G - ReadM SNP 0007.scaffold00024 594330 1 T A - ReadM SNP 0007.scaffold00024 594485 1 C T - ReadM SNP 0007.scaffold00024 594524 1 C A - ReadM SNP 0007.scaffold00024 594760 1 A G - ReadM SNP 0007.scaffold00024 595099 1 G A - Both SNP 0007.scaffold00024 595376 1 A C scaffold13433 ReadM SNP 0007.scaffold00024 595542 1 T C - ReadM SNP 0007.scaffold00024 595686 1 T A - ReadM SNP 0007.scaffold00024 595799 1 A G - ReadM SNP 0007.scaffold00024 595836 1 A G - ReadM SNP 0007.scaffold00024 595924 1 T G - ReadM SNP 0007.scaffold00024 595960 1 C T - ReadM INDEL 0007.scaffold00024 596112 1 . C - ReadM SNP 0007.scaffold00024 596175 1 C A - ReadM SNP 0007.scaffold00024 596224 1 C T - ReadM SNP 0007.scaffold00024 596287 1 C T - ReadM SNP 0007.scaffold00024 596334 1 T C - ScafM SNP 0007.scaffold00024 597480 1 C T scaffold13433 Both SNP 0007.scaffold00024 597580 1 T G scaffold13433 ReadM SNP 0007.scaffold00024 597687 1 A T - ReadM SNP 0007.scaffold00024 597932 1 A G - ReadM INDEL 0007.scaffold00024 598800 1 . A - ReadM SNP 0007.scaffold00024 599102 1 A T - ReadM SNP 0007.scaffold00024 599158 1 T C - ReadM INDEL 0007.scaffold00024 599315 1 T . - ReadM SNP 0007.scaffold00024 599345 1 T C - ReadM SNP 0007.scaffold00024 599636 1 G A - ReadM INDEL 0007.scaffold00024 599658 1 T . - ReadM SNP 0007.scaffold00024 599943 1 T C - ReadM SNP 0007.scaffold00024 599998 1 G T - ReadM SNP 0007.scaffold00024 600114 1 T A - ReadM SNP 0007.scaffold00024 600280 1 T C - ReadM SNP 0007.scaffold00024 600373 1 G C - ReadM SNP 0007.scaffold00024 600642 1 G T - ReadM SNP 0007.scaffold00024 600690 1 C T - ReadM SNP 0007.scaffold00024 601293 1 T C - ReadM SNP 0007.scaffold00024 601336 1 A G - ReadM SNP 0007.scaffold00024 601461 1 C A - ReadM SNP 0007.scaffold00024 601525 1 T C - ReadM SNP 0007.scaffold00024 601674 1 G A - ReadM SNP 0007.scaffold00024 601808 1 A G - Both SNP 0007.scaffold00024 602095 1 C G scaffold13433 Both SNP 0007.scaffold00024 602608 1 C T scaffold13433 ReadM SNP 0007.scaffold00024 603356 1 G A - ReadM SNP 0007.scaffold00024 603633 1 G A - ReadM SNP 0007.scaffold00024 604057 1 C T - ReadM SNP 0007.scaffold00024 604081 1 A C - ReadM INDEL 0007.scaffold00024 604213 1 . A - ReadM SNP 0007.scaffold00024 604445 1 G A - ReadM SNP 0007.scaffold00024 604626 1 G T - ReadM INDEL 0007.scaffold00024 604710 3 CTA ... - ReadM SNP 0007.scaffold00024 605136 1 G T - ReadM SNP 0007.scaffold00024 605202 1 G A - ReadM SNP 0007.scaffold00024 605343 1 C A - ReadM SNP 0007.scaffold00024 605382 1 T G - ReadM SNP 0007.scaffold00024 605413 1 C T - Both SNP 0007.scaffold00024 605654 1 A T scaffold13433 ReadM INDEL 0007.scaffold00024 605838 1 . A - Both SNP 0007.scaffold00024 605986 1 A G scaffold13433 ReadM INDEL 0007.scaffold00024 606400 1 . A - Both SNP 0007.scaffold00024 606431 1 T C scaffold13433 Both SNP 0007.scaffold00024 606597 1 T C scaffold13433 Both SNP 0007.scaffold00024 606715 1 G C scaffold13433 ScafM INDEL 0007.scaffold00024 607467 18 TTGCCTGCTTTACCTACG .................. scaffold13433 Both SNP 0007.scaffold00024 607798 1 C T scaffold13433 ReadM SNP 0007.scaffold00024 607974 1 T C - ReadM SNP 0007.scaffold00024 608007 1 A T - ReadM SNP 0007.scaffold00024 608011 1 T C - ReadM SNP 0007.scaffold00024 608052 1 A G - Both SNP 0007.scaffold00024 608096 1 G A scaffold13433 Both SNP 0007.scaffold00024 608141 1 A C scaffold13433 Both SNP 0007.scaffold00024 608181 1 C T scaffold13433 ScafM INDEL 0007.scaffold00024 608389 1 . A scaffold13433 ScafM SNP 0007.scaffold00024 608766 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 609408 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 609498 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 609544 1 T G scaffold13433 ScafM INDEL 0007.scaffold00024 609650 10 .......... CTGATAAAGG scaffold13433 ScafM SNP 0007.scaffold00024 609689 1 G T scaffold13433 ScafM INDEL 0007.scaffold00024 609701 3 ... TCG scaffold13433 ScafM SNP 0007.scaffold00024 609743 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 609748 1 C G scaffold13433 ScafM SNP 0007.scaffold00024 609763 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 609783 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 609920 1 A C scaffold13433 Both SNP 0007.scaffold00024 609943 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 610102 1 C A scaffold13433 Both SNP 0007.scaffold00024 610208 1 T C scaffold13433 ReadM SNP 0007.scaffold00024 610245 1 T C - ReadM SNP 0007.scaffold00024 610264 1 T C - Both SNP 0007.scaffold00024 610559 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 610644 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 610824 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 610826 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 610864 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 610903 1 A G scaffold13433 ScafM SNP 0007.scaffold00024 612418 1 G A scaffold13433 Both SNP 0007.scaffold00024 612515 1 T G scaffold13433 Both SNP 0007.scaffold00024 612530 1 A G scaffold13433 Both SNP 0007.scaffold00024 612576 1 T A scaffold13433 Both SNP 0007.scaffold00024 612636 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 612986 1 T C - ReadM INDEL 0007.scaffold00024 613065 1 . T - Both SNP 0007.scaffold00024 613125 1 T G scaffold13433 Both SNP 0007.scaffold00024 613317 1 A G scaffold13433 Both SNP 0007.scaffold00024 613489 1 C T scaffold13433 Both SNP 0007.scaffold00024 613522 1 A G scaffold13433 Both SNP 0007.scaffold00024 613834 1 A G scaffold13433 Both INDEL 0007.scaffold00024 613940 2 AT .. scaffold13433 Both SNP 0007.scaffold00024 614151 1 A G scaffold13433 Both SNP 0007.scaffold00024 614685 1 C T scaffold13433 Both SNP 0007.scaffold00024 614797 1 T C scaffold13433 ReadM SNP 0007.scaffold00024 614950 1 A G - ReadM SNP 0007.scaffold00024 614986 1 A G - ReadM SNP 0007.scaffold00024 615245 1 A G - ReadM SNP 0007.scaffold00024 615718 1 T C - ReadM SNP 0007.scaffold00024 615842 1 G A - ReadM SNP 0007.scaffold00024 615951 1 G T - ReadM SNP 0007.scaffold00024 616174 1 T G - ReadM SNP 0007.scaffold00024 616306 1 A C - ReadM SNP 0007.scaffold00024 616362 1 T C - ReadM SNP 0007.scaffold00024 616585 1 C A - ReadM SNP 0007.scaffold00024 616635 1 A T - ReadM SNP 0007.scaffold00024 616769 1 T C - ReadM SNP 0007.scaffold00024 616962 1 T A - ReadM SNP 0007.scaffold00024 617535 1 T C - ReadM SNP 0007.scaffold00024 617687 1 T A - ReadM SNP 0007.scaffold00024 617718 1 C T - ReadM SNP 0007.scaffold00024 617737 1 C T - ReadM SNP 0007.scaffold00024 617911 1 C T - ReadM SNP 0007.scaffold00024 617963 1 G A - ReadM SNP 0007.scaffold00024 618011 1 A C - ReadM SNP 0007.scaffold00024 618194 1 T A - ReadM SNP 0007.scaffold00024 618389 1 A T - ReadM SNP 0007.scaffold00024 618409 1 G A - ReadM SNP 0007.scaffold00024 618423 1 T C - ReadM SNP 0007.scaffold00024 619133 1 T G - ScafM SNP 0007.scaffold00024 619271 1 T G scaffold13433 Both SNP 0007.scaffold00024 619383 1 G A scaffold13433 Both SNP 0007.scaffold00024 619390 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 619452 2 GC CT scaffold13433 Both SNP 0007.scaffold00024 619759 1 C G scaffold13433 Both SNP 0007.scaffold00024 619826 1 C G scaffold13433 ReadM SNP 0007.scaffold00024 619866 1 G T - ReadM SNP 0007.scaffold00024 620034 1 C G - ReadM SNP 0007.scaffold00024 620105 1 G A - ReadM SNP 0007.scaffold00024 620307 1 A T - ReadM SNP 0007.scaffold00024 620460 1 G A - ReadM SNP 0007.scaffold00024 620602 1 G C - ReadM SNP 0007.scaffold00024 620889 1 T C - ReadM SNP 0007.scaffold00024 621225 1 T C - ReadM SNP 0007.scaffold00024 621329 1 T A - ReadM SNP 0007.scaffold00024 621376 1 T C - ReadM SNP 0007.scaffold00024 621443 1 A G - Both SNP 0007.scaffold00024 621488 1 G A scaffold13433 Both INDEL 0007.scaffold00024 621668 1 C . scaffold13433 Both SNP 0007.scaffold00024 621769 1 A G scaffold13433 ReadM SNP 0007.scaffold00024 621981 1 A C - Both SNP 0007.scaffold00024 622189 1 A G scaffold13433 Both SNP 0007.scaffold00024 622417 1 T C scaffold13433 Both INDEL 0007.scaffold00024 622515 1 T . scaffold13433 Both SNP 0007.scaffold00024 622534 1 A G scaffold13433 Both SNP 0007.scaffold00024 622561 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 622686 1 T A scaffold13433 Both INDEL 0007.scaffold00024 622689 2 AA .. scaffold13433 ScafM SNP 0007.scaffold00024 623361 1 G A scaffold13433 Both SNP 0007.scaffold00024 623448 1 C T scaffold13433 Both INDEL 0007.scaffold00024 623639 1 . A scaffold13433 ReadM SNP 0007.scaffold00024 624188 1 G A - ReadM SNP 0007.scaffold00024 624229 1 T C - ReadM SNP 0007.scaffold00024 624307 1 A G - ReadM INDEL 0007.scaffold00024 624932 2 TA .. - ReadM SNP 0007.scaffold00024 625191 1 G A - ReadM SNP 0007.scaffold00024 625474 1 A G - ReadM SNP 0007.scaffold00024 625519 1 A C - ReadM SNP 0007.scaffold00024 625697 1 C T - Both SNP 0007.scaffold00024 629281 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 629355 1 G A - ReadM INDEL 0007.scaffold00024 629416 1 T . - ReadM INDEL 0007.scaffold00024 629417 1 A . - ReadM SNP 0007.scaffold00024 629711 1 A G - ReadM SNP 0007.scaffold00024 629740 1 C G - ReadM SNP 0007.scaffold00024 629887 1 A G - ReadM SNP 0007.scaffold00024 629903 1 G T - ReadM SNP 0007.scaffold00024 629916 1 A G - ReadM SNP 0007.scaffold00024 630236 1 G A - ReadM SNP 0007.scaffold00024 630309 1 C A - ReadM SNP 0007.scaffold00024 630429 1 C A - ReadM SNP 0007.scaffold00024 630440 1 G A - ReadM SNP 0007.scaffold00024 630505 1 C T - ReadM INDEL 0007.scaffold00024 630592 1 . A - ReadM SNP 0007.scaffold00024 630612 1 T C - ReadM SNP 0007.scaffold00024 630670 1 A G - ReadM INDEL 0007.scaffold00024 630712 1 . T - Both SNP 0007.scaffold00024 630772 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 632350 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 632352 1 A T scaffold13433 ScafM SNP 0007.scaffold00024 632354 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 632356 1 T G scaffold13433 ScafM INDEL 0007.scaffold00024 632362 8 ........ TCAAGTAT scaffold13433 ScafM SNP 0007.scaffold00024 632462 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 632480 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 632591 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 632663 1 G A scaffold13433 Both SNP 0007.scaffold00024 632856 1 G C scaffold13433 Both SNP 0007.scaffold00024 632880 1 C T scaffold13433 Both INDEL 0007.scaffold00024 632948 1 . A scaffold13433 ScafM INDEL 0007.scaffold00024 632972 2 GC .. scaffold13433 ScafM SNP 0007.scaffold00024 633051 1 C T scaffold13433 ScafM INDEL 0007.scaffold00024 633058 2 AA .T scaffold13433 ScafM INDEL 0007.scaffold00024 633074 1 A . scaffold13433 Both SNP 0007.scaffold00024 633144 1 G T scaffold13433 ScafM SNP 0007.scaffold00024 633194 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 633199 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 633224 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 633244 1 T G scaffold13433 ReadM SNP 0007.scaffold00024 633549 1 C T - ScafM SNP 0007.scaffold00024 633716 1 G T scaffold13433 ScafM SNP 0007.scaffold00024 633740 1 T C scaffold13433 ScafM INDEL 0007.scaffold00024 633755 1 T . scaffold13433 ScafM SNP 0007.scaffold00024 633888 2 TG CA scaffold13433 ScafM INDEL 0007.scaffold00024 633987 3 ATT ... scaffold13433 ScafM SNP 0007.scaffold00024 634303 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 634319 1 C G scaffold13433 ScafM SNP 0007.scaffold00024 634396 1 A C scaffold13433 ScafM SNP 0007.scaffold00024 634522 1 T A scaffold13433 ScafM SNP 0007.scaffold00024 634574 2 AT GC scaffold13433 ReadM SNP 0007.scaffold00024 634575 1 T C - ScafM INDEL 0007.scaffold00024 634597 6 ...... AAAAAA scaffold13433 ScafM SNP 0007.scaffold00024 634599 1 C A scaffold13433 ScafM SNP 0007.scaffold00024 634632 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 634639 1 G A scaffold13433 ScafM SNP 0007.scaffold00024 634706 1 T A scaffold13433 ScafM INDEL 0007.scaffold00024 634813 2 AA .. scaffold13433 ScafM INDEL 0007.scaffold00024 634828 6 ATTAGT ...... scaffold13433 ScafM SNP 0007.scaffold00024 634852 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 634878 1 A G scaffold13433 ScafM INDEL 0007.scaffold00024 634948 3 ... TTT scaffold13433 ScafM SNP 0007.scaffold00024 634952 1 T G scaffold13433 ScafM SNP 0007.scaffold00024 634954 2 TT GG scaffold13433 Both SNP 0007.scaffold00024 635039 1 C G scaffold13433 Both SNP 0007.scaffold00024 635332 1 A C scaffold13433 Both SNP 0007.scaffold00024 635459 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 635702 1 T C scaffold13433 ReadM SNP 0007.scaffold00024 635993 1 A G - ReadM SNP 0007.scaffold00024 636220 1 A C - ReadM SNP 0007.scaffold00024 636593 1 C T - ReadM SNP 0007.scaffold00024 636735 1 G A - Both SNP 0007.scaffold00024 636820 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 636943 1 G C scaffold13433 ScafM SNP 0007.scaffold00024 637082 1 C T scaffold13433 ScafM SNP 0007.scaffold00024 637100 1 T C scaffold13433 ScafM SNP 0007.scaffold00024 637120 1 A G scaffold13433 ReadM SNP 0007.scaffold00024 637244 1 G T - ReadM SNP 0007.scaffold00024 637293 1 A T - ReadM SNP 0007.scaffold00024 637581 1 T C - ReadM SNP 0007.scaffold00024 637661 1 A G - ReadM SNP 0007.scaffold00024 637776 1 C A - ReadM SNP 0007.scaffold00024 637804 1 C A - ReadM SNP 0007.scaffold00024 637837 1 G A - ReadM SNP 0007.scaffold00024 637873 1 T C - ReadM SNP 0007.scaffold00024 637892 1 G A - ReadM SNP 0007.scaffold00024 637971 1 G A - ReadM SNP 0007.scaffold00024 637981 1 G A - ReadM SNP 0007.scaffold00024 638001 1 T C - ReadM SNP 0007.scaffold00024 638127 1 A C - ReadM SNP 0007.scaffold00024 638130 1 T C - ReadM SNP 0007.scaffold00024 638161 1 G A - ReadM SNP 0007.scaffold00024 638216 1 G A - ReadM SNP 0007.scaffold00024 638220 1 C T - ReadM SNP 0007.scaffold00024 638224 1 C G - ReadM INDEL 0007.scaffold00024 638295 1 . C - ReadM SNP 0007.scaffold00024 638323 1 C T - Both SNP 0007.scaffold00024 638543 1 T G scaffold13433 Both SNP 0007.scaffold00024 638548 1 A G scaffold13433 Both SNP 0007.scaffold00024 638630 1 C G scaffold13433 Both SNP 0007.scaffold00024 638643 1 G C scaffold13433 ReadM SNP 0007.scaffold00024 638836 1 T C - ReadM SNP 0007.scaffold00024 639005 1 G T - ReadM SNP 0007.scaffold00024 639050 1 C G - ReadM SNP 0007.scaffold00024 639280 1 A G - ReadM SNP 0007.scaffold00024 639364 1 G A - ReadM SNP 0007.scaffold00024 639502 1 A G - ReadM SNP 0007.scaffold00024 639699 1 C G - ReadM SNP 0007.scaffold00024 639807 1 A G - ReadM SNP 0007.scaffold00024 639849 1 C A - ReadM SNP 0007.scaffold00024 640242 1 C T - ReadM SNP 0007.scaffold00024 640377 1 C A - ReadM SNP 0007.scaffold00024 640558 1 A G - ReadM SNP 0007.scaffold00024 640643 1 T A - Both SNP 0007.scaffold00024 640888 1 G A scaffold13433 ReadM SNP 0007.scaffold00024 641165 1 A G - ReadM SNP 0007.scaffold00024 641396 1 T C - ScafM SNP 0007.scaffold00024 641928 1 G C scaffold21815 ReadM INDEL 0007.scaffold00024 641968 1 . A - ScafM SNP 0007.scaffold00024 641978 1 G C scaffold21815 ScafM INDEL 0007.scaffold00024 642002 1 . A scaffold21815 ScafM SNP 0007.scaffold00024 642049 1 G A scaffold21815 Both SNP 0007.scaffold00024 642052 1 A C scaffold21815 ScafM SNP 0007.scaffold00024 642101 1 T C scaffold21815 ScafM SNP 0007.scaffold00024 642107 1 T A scaffold21815 ScafM INDEL 0007.scaffold00024 642131 2 TT .. scaffold21815 ScafM SNP 0007.scaffold00024 642134 1 T A scaffold21815 ScafM SNP 0007.scaffold00024 642215 1 C T scaffold21815 ScafM INDEL 0007.scaffold00024 642249 6 ...... AAAAAA scaffold21815 ScafM SNP 0007.scaffold00024 642436 1 G C scaffold21815 ScafM INDEL 0007.scaffold00024 642515 1 T . scaffold21815 ScafM INDEL 0007.scaffold00024 642791 3 TTT ... scaffold21815 ScafM INDEL 0007.scaffold00024 642796 2 CT .A scaffold21815 ScafM INDEL 0007.scaffold00024 642800 1 A . scaffold21815 ScafM INDEL 0007.scaffold00024 642804 6 TAATGG ...... scaffold21815 ScafM SNP 0007.scaffold00024 642909 1 A C scaffold21815 ScafM SNP 0007.scaffold00024 643087 1 C T scaffold21815 ReadM INDEL 0007.scaffold00024 643429 1 A . - ReadM SNP 0007.scaffold00024 643621 1 A G - ReadM SNP 0007.scaffold00024 643841 1 C G - ReadM SNP 0007.scaffold00024 644022 1 T A - Both SNP 0007.scaffold00024 644769 1 A G scaffold10052 Both SNP 0007.scaffold00024 644780 1 A T scaffold10052 Both SNP 0007.scaffold00024 644987 1 T C scaffold10052 Both SNP 0007.scaffold00024 645219 1 A T scaffold10052 ScafM INDEL 0007.scaffold00024 645383 1 . A scaffold10052 Both SNP 0007.scaffold00024 645402 1 A G scaffold10052 Both INDEL 0007.scaffold00024 645499 1 A . scaffold10052 Both SNP 0007.scaffold00024 645558 1 A G scaffold10052 ReadM SNP 0007.scaffold00024 645688 1 A T - Both SNP 0007.scaffold00024 645765 1 C T scaffold10052 Both INDEL 0007.scaffold00024 645801 1 G . scaffold10052 Both SNP 0007.scaffold00024 645835 1 G C scaffold10052 Both INDEL 0007.scaffold00024 645908 1 C . scaffold10052 Both SNP 0007.scaffold00024 645935 1 A G scaffold10052 Both SNP 0007.scaffold00024 645974 1 G T scaffold10052 ScafM SNP 0007.scaffold00024 646719 1 A T scaffold10052 ScafM SNP 0007.scaffold00024 646724 1 A T scaffold10052 ScafM SNP 0007.scaffold00024 646894 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 647093 1 A G scaffold10052 ScafM INDEL 0007.scaffold00024 647166 1 . A scaffold10052 ScafM INDEL 0007.scaffold00024 647168 3 ... AGG scaffold10052 ScafM INDEL 0007.scaffold00024 647169 3 ... GAG scaffold10052 ScafM SNP 0007.scaffold00024 647196 1 G C scaffold10052 ScafM SNP 0007.scaffold00024 647258 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 647286 1 T A scaffold10052 ScafM SNP 0007.scaffold00024 647423 1 T C scaffold10052 Both SNP 0007.scaffold00024 647479 1 A G scaffold10052 ScafM SNP 0007.scaffold00024 647625 1 G C scaffold10052 ReadM SNP 0007.scaffold00024 647847 1 T C - ReadM SNP 0007.scaffold00024 647902 1 G A - ReadM SNP 0007.scaffold00024 648364 1 T C - Both SNP 0007.scaffold00024 648936 1 G A scaffold10052 Both SNP 0007.scaffold00024 649036 1 G A scaffold10052 Both SNP 0007.scaffold00024 649937 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 650308 1 G C scaffold10052 ScafM SNP 0007.scaffold00024 650323 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 650328 1 G A scaffold10052 ScafM INDEL 0007.scaffold00024 650337 23 ....................... ACAATTCAAATAATCTAAAATGC scaffold10052 ScafM SNP 0007.scaffold00024 650365 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 650375 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 650383 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 650568 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 650677 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 650791 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 650890 1 T A scaffold10052 Both SNP 0007.scaffold00024 650936 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 650948 1 G A scaffold10052 Both SNP 0007.scaffold00024 651011 1 C T scaffold10052 ReadM SNP 0007.scaffold00024 651126 1 T G - ReadM SNP 0007.scaffold00024 651136 1 G A - ReadM INDEL 0007.scaffold00024 651435 1 C . - ReadM SNP 0007.scaffold00024 651485 1 C T - ReadM SNP 0007.scaffold00024 651671 1 G C - ScafM SNP 0007.scaffold00024 656412 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 656472 1 C A scaffold10052 ReadM SNP 0007.scaffold00024 657242 1 G A - ReadM SNP 0007.scaffold00024 657414 1 C G - ReadM INDEL 0007.scaffold00024 657418 1 . A - ReadM SNP 0007.scaffold00024 657531 1 T C - ReadM SNP 0007.scaffold00024 657641 1 G A - ReadM SNP 0007.scaffold00024 657750 1 G A - ReadM SNP 0007.scaffold00024 657873 1 G A - ReadM INDEL 0007.scaffold00024 658179 2 AC .. - ReadM SNP 0007.scaffold00024 658271 1 A G - ReadM SNP 0007.scaffold00024 658356 1 G A - ReadM SNP 0007.scaffold00024 658548 1 C T - ReadM SNP 0007.scaffold00024 658606 1 G A - ReadM SNP 0007.scaffold00024 658629 1 C T - ReadM SNP 0007.scaffold00024 658662 1 T C - ReadM SNP 0007.scaffold00024 658669 1 T C - ReadM SNP 0007.scaffold00024 658696 1 C T - ReadM SNP 0007.scaffold00024 658770 1 A G - ReadM SNP 0007.scaffold00024 658799 1 A C - ReadM SNP 0007.scaffold00024 658841 1 C T - ReadM INDEL 0007.scaffold00024 659072 2 .. CT - ReadM SNP 0007.scaffold00024 659126 1 A G - ReadM SNP 0007.scaffold00024 659166 1 G A - ReadM SNP 0007.scaffold00024 659418 1 T C - ReadM SNP 0007.scaffold00024 659555 1 A T - ReadM SNP 0007.scaffold00024 659767 1 T C - Both SNP 0007.scaffold00024 659861 1 A G scaffold10052 Both SNP 0007.scaffold00024 660169 1 A G scaffold10052 Both SNP 0007.scaffold00024 660230 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 660243 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 660282 1 A C scaffold10052 ReadM SNP 0007.scaffold00024 660661 1 G T - ReadM SNP 0007.scaffold00024 660712 1 C A - ReadM SNP 0007.scaffold00024 660753 1 A G - ReadM SNP 0007.scaffold00024 661087 1 A G - ReadM SNP 0007.scaffold00024 661187 1 G A - ReadM SNP 0007.scaffold00024 661229 1 T C - ReadM SNP 0007.scaffold00024 661266 1 C T - ReadM SNP 0007.scaffold00024 661498 1 A C - ReadM SNP 0007.scaffold00024 661507 1 T G - ReadM SNP 0007.scaffold00024 661540 1 T C - ReadM SNP 0007.scaffold00024 663341 1 T C - Both SNP 0007.scaffold00024 663395 1 G A scaffold10052 Both SNP 0007.scaffold00024 663398 1 A G scaffold10052 Both SNP 0007.scaffold00024 663430 1 C T scaffold10052 ReadM SNP 0007.scaffold00024 663944 1 A G - ReadM SNP 0007.scaffold00024 663988 1 C A - ReadM SNP 0007.scaffold00024 664108 1 T G - ReadM SNP 0007.scaffold00024 664181 1 C T - ReadM SNP 0007.scaffold00024 664204 1 G A - ScafM SNP 0007.scaffold00024 664205 1 G A scaffold252 ScafM SNP 0007.scaffold00024 664210 1 A T scaffold252 Both SNP 0007.scaffold00024 664220 1 G C scaffold252 ScafM SNP 0007.scaffold00024 664232 1 C T scaffold252 ScafM SNP 0007.scaffold00024 664254 1 G A scaffold252 ScafM SNP 0007.scaffold00024 664273 1 G A scaffold252 ScafM SNP 0007.scaffold00024 664363 1 A G scaffold252 ScafM SNP 0007.scaffold00024 664381 1 A G scaffold252 ScafM SNP 0007.scaffold00024 664402 1 T C scaffold252 ScafM SNP 0007.scaffold00024 664409 1 A G scaffold252 ScafM SNP 0007.scaffold00024 664417 1 C G scaffold252 ScafM SNP 0007.scaffold00024 664422 1 G T scaffold252 ScafM INDEL 0007.scaffold00024 664430 1 . A scaffold252 ScafM INDEL 0007.scaffold00024 664437 2 .. CT scaffold252 ScafM SNP 0007.scaffold00024 664444 1 A C scaffold252 ScafM SNP 0007.scaffold00024 664471 1 T G scaffold252 ScafM SNP 0007.scaffold00024 664491 1 C G scaffold252 ScafM INDEL 0007.scaffold00024 664497 1 A . scaffold252 ScafM INDEL 0007.scaffold00024 664502 2 CG .. scaffold252 ScafM SNP 0007.scaffold00024 664531 1 G A scaffold252 Both SNP 0007.scaffold00024 664744 1 C T scaffold10052 ReadM SNP 0007.scaffold00024 664813 1 C T - ReadM SNP 0007.scaffold00024 665078 1 T C - ReadM INDEL 0007.scaffold00024 665112 1 . C - ReadM SNP 0007.scaffold00024 665154 1 G A - ReadM SNP 0007.scaffold00024 665426 1 T A - ReadM SNP 0007.scaffold00024 665488 1 A G - ReadM SNP 0007.scaffold00024 665662 1 T C - ReadM SNP 0007.scaffold00024 665840 1 C A - ReadM SNP 0007.scaffold00024 665848 1 C T - ReadM SNP 0007.scaffold00024 666078 1 T C - ReadM SNP 0007.scaffold00024 666951 1 C T - ReadM SNP 0007.scaffold00024 666967 1 A T - ReadM SNP 0007.scaffold00024 667312 1 A G - ReadM SNP 0007.scaffold00024 667640 1 G A - ReadM SNP 0007.scaffold00024 667740 1 G C - ReadM SNP 0007.scaffold00024 668055 1 A G - ReadM SNP 0007.scaffold00024 668260 1 T G - ReadM SNP 0007.scaffold00024 668642 1 G A - ReadM SNP 0007.scaffold00024 668754 1 G T - ReadM SNP 0007.scaffold00024 668758 1 C A - ReadM SNP 0007.scaffold00024 668763 1 G A - Both SNP 0007.scaffold00024 669048 1 T A scaffold10052 Both SNP 0007.scaffold00024 669351 1 C T scaffold10052 Both SNP 0007.scaffold00024 669362 1 A T scaffold10052 Both SNP 0007.scaffold00024 669397 1 T A scaffold10052 Both SNP 0007.scaffold00024 669419 1 T C scaffold10052 Both SNP 0007.scaffold00024 669554 1 T C scaffold10052 Both SNP 0007.scaffold00024 669636 1 C T scaffold10052 Both SNP 0007.scaffold00024 669800 1 G T scaffold10052 Both SNP 0007.scaffold00024 670061 1 T A scaffold10052 ScafM SNP 0007.scaffold00024 670088 1 C G scaffold10052 Both SNP 0007.scaffold00024 670213 1 T C scaffold10052 Both SNP 0007.scaffold00024 670326 1 C G scaffold10052 Both SNP 0007.scaffold00024 670416 1 C T scaffold10052 Both SNP 0007.scaffold00024 670519 1 G T scaffold10052 Both SNP 0007.scaffold00024 670590 1 C A scaffold10052 Both SNP 0007.scaffold00024 670647 1 G T scaffold10052 Both SNP 0007.scaffold00024 670896 1 A T scaffold10052 Both SNP 0007.scaffold00024 671006 1 C T scaffold10052 Both SNP 0007.scaffold00024 671036 1 A T scaffold10052 Both SNP 0007.scaffold00024 671051 1 A C scaffold10052 Both SNP 0007.scaffold00024 671277 1 T A scaffold10052 Both SNP 0007.scaffold00024 671319 1 T G scaffold10052 Both SNP 0007.scaffold00024 671370 1 C G scaffold10052 Both SNP 0007.scaffold00024 671396 1 A G scaffold10052 Both SNP 0007.scaffold00024 671674 1 A G scaffold10052 Both SNP 0007.scaffold00024 671698 1 A T scaffold10052 Both SNP 0007.scaffold00024 671703 1 G A scaffold10052 Both SNP 0007.scaffold00024 671773 1 A T scaffold10052 Both SNP 0007.scaffold00024 671893 1 T A scaffold10052 Both SNP 0007.scaffold00024 671943 1 T C scaffold10052 ScafM INDEL 0007.scaffold00024 671971 2 AA .. scaffold10052 ScafM SNP 0007.scaffold00024 671974 1 T G scaffold10052 Both SNP 0007.scaffold00024 672057 1 A T scaffold10052 Both SNP 0007.scaffold00024 672182 1 G C scaffold10052 Both SNP 0007.scaffold00024 672206 1 C T scaffold10052 Both SNP 0007.scaffold00024 672228 1 C A scaffold10052 Both INDEL 0007.scaffold00024 672231 1 . T scaffold10052 Both SNP 0007.scaffold00024 672317 1 C T scaffold10052 ScafM SNP 0007.scaffold00024 672445 1 T C scaffold10052 Both SNP 0007.scaffold00024 672550 1 A G scaffold10052 ScafM SNP 0007.scaffold00024 672603 1 A G scaffold10052 ScafM SNP 0007.scaffold00024 672709 1 T G scaffold10052 ScafM SNP 0007.scaffold00024 672714 1 A G scaffold10052 ScafM SNP 0007.scaffold00024 672771 2 GC AA scaffold10052 ScafM SNP 0007.scaffold00024 672792 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 673172 1 T G scaffold10052 ScafM SNP 0007.scaffold00024 673176 1 T A scaffold10052 ScafM SNP 0007.scaffold00024 673188 1 A G scaffold10052 ScafM SNP 0007.scaffold00024 673192 1 G C scaffold10052 ScafM SNP 0007.scaffold00024 673221 1 G A scaffold10052 ScafM INDEL 0007.scaffold00024 673233 2 .. GA scaffold10052 ScafM INDEL 0007.scaffold00024 673249 1 . A scaffold10052 ScafM INDEL 0007.scaffold00024 673257 4 .... CCAG scaffold10052 ScafM INDEL 0007.scaffold00024 673258 4 .... AACC scaffold10052 ScafM SNP 0007.scaffold00024 673284 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 673296 1 A T scaffold10052 ScafM SNP 0007.scaffold00024 673302 1 C G scaffold10052 ScafM SNP 0007.scaffold00024 673379 1 C G scaffold10052 ScafM INDEL 0007.scaffold00024 673460 1 T . scaffold10052 ScafM SNP 0007.scaffold00024 673462 1 G A scaffold10052 ScafM SNP 0007.scaffold00024 673479 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 673510 1 T G scaffold10052 ScafM INDEL 0007.scaffold00024 673851 7 ACAGTGA ....... scaffold10052 ScafM SNP 0007.scaffold00024 673862 1 A G scaffold10052 ScafM INDEL 0007.scaffold00024 673886 1 T . scaffold10052 ScafM SNP 0007.scaffold00024 673888 1 T C scaffold10052 ScafM SNP 0007.scaffold00024 675800 1 C A scaffold30941 ScafM SNP 0007.scaffold00024 675813 1 A G scaffold30941 ScafM INDEL 0007.scaffold00024 675868 2 .C TT scaffold30941 ScafM SNP 0007.scaffold00024 675898 1 C T scaffold30941 ScafM SNP 0007.scaffold00024 675906 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 675930 2 AT TA scaffold30941 ScafM SNP 0007.scaffold00024 675973 1 A C scaffold30941 Both SNP 0007.scaffold00024 676057 1 T A scaffold30941 ScafM SNP 0007.scaffold00024 676089 1 A T scaffold30941 ScafM SNP 0007.scaffold00024 676183 1 A G scaffold30941 ReadM SNP 0007.scaffold00024 676581 1 A G - ReadM SNP 0007.scaffold00024 676606 1 G A - ScafM SNP 0007.scaffold00024 676928 1 A C scaffold30941 ScafM SNP 0007.scaffold00024 677050 1 T C scaffold30941 ScafM INDEL 0007.scaffold00024 677061 1 . A scaffold30941 ScafM SNP 0007.scaffold00024 677065 1 G T scaffold30941 Both SNP 0007.scaffold00024 677134 1 A T scaffold30941 Both SNP 0007.scaffold00024 677149 1 C T scaffold30941 Both SNP 0007.scaffold00024 677212 1 G A scaffold30941 Both SNP 0007.scaffold00024 677264 1 C G scaffold30941 ScafM SNP 0007.scaffold00024 677322 1 T C scaffold30941 ScafM SNP 0007.scaffold00024 677338 1 C T scaffold30941 ScafM SNP 0007.scaffold00024 677370 1 C T scaffold30941 Both SNP 0007.scaffold00024 677382 1 C T scaffold30941 Both SNP 0007.scaffold00024 677426 1 A G scaffold30941 Both SNP 0007.scaffold00024 677471 1 T C scaffold30941 Both SNP 0007.scaffold00024 677509 1 G A scaffold30941 Both SNP 0007.scaffold00024 677632 1 T A scaffold30941 ScafM SNP 0007.scaffold00024 677676 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 677682 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 677697 1 T A scaffold30941 Both SNP 0007.scaffold00024 677732 1 C T scaffold30941 Both SNP 0007.scaffold00024 677745 1 A T scaffold30941 Both SNP 0007.scaffold00024 677762 1 T G scaffold30941 ScafM SNP 0007.scaffold00024 677828 1 G C scaffold30941 ScafM SNP 0007.scaffold00024 677832 1 T A scaffold30941 ScafM SNP 0007.scaffold00024 677835 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 677862 1 A G scaffold30941 Both SNP 0007.scaffold00024 677911 1 A G scaffold30941 Both SNP 0007.scaffold00024 677919 1 G C scaffold30941 ScafM SNP 0007.scaffold00024 677996 1 T G scaffold30941 ReadM SNP 0007.scaffold00024 678104 1 C T - ReadM SNP 0007.scaffold00024 678207 1 T A - ReadM INDEL 0007.scaffold00024 678225 1 . T - ReadM SNP 0007.scaffold00024 678291 1 C T - ReadM INDEL 0007.scaffold00024 678411 1 C . - ReadM SNP 0007.scaffold00024 678449 1 C T - ReadM SNP 0007.scaffold00024 678703 1 C T - ReadM INDEL 0007.scaffold00024 678839 2 TT .. - ReadM SNP 0007.scaffold00024 678891 1 C A - ReadM SNP 0007.scaffold00024 678961 1 T C - ReadM SNP 0007.scaffold00024 678975 1 A G - ReadM SNP 0007.scaffold00024 678999 1 G A - ReadM SNP 0007.scaffold00024 679021 1 A G - ReadM SNP 0007.scaffold00024 679072 1 T C - Both SNP 0007.scaffold00024 679077 1 T C scaffold30941 ScafM INDEL 0007.scaffold00024 679207 4 .... TTAC scaffold30941 ScafM SNP 0007.scaffold00024 679258 1 A G scaffold30941 ScafM INDEL 0007.scaffold00024 679267 1 . T scaffold30941 ScafM SNP 0007.scaffold00024 679271 1 C A scaffold30941 ScafM INDEL 0007.scaffold00024 679279 1 . C scaffold30941 ScafM SNP 0007.scaffold00024 679305 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 679310 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 679326 1 G T scaffold30941 ScafM INDEL 0007.scaffold00024 679336 8 TCAATTAG ........ scaffold30941 Both SNP 0007.scaffold00024 679615 1 T A scaffold30941 ScafM INDEL 0007.scaffold00024 679692 5 ..... AGCCC scaffold30941 ScafM SNP 0007.scaffold00024 679756 1 C A scaffold30941 ReadM SNP 0007.scaffold00024 680789 1 G A - ReadM SNP 0007.scaffold00024 680962 1 T A - ReadM SNP 0007.scaffold00024 680999 1 G C - ReadM SNP 0007.scaffold00024 681013 1 T G - ReadM INDEL 0007.scaffold00024 681235 1 . G - ReadM SNP 0007.scaffold00024 681266 1 A T - ReadM SNP 0007.scaffold00024 681296 1 A G - ReadM SNP 0007.scaffold00024 681311 1 T C - ReadM SNP 0007.scaffold00024 681373 1 A G - ReadM SNP 0007.scaffold00024 681405 1 C G - ReadM SNP 0007.scaffold00024 681409 1 A G - ReadM SNP 0007.scaffold00024 682139 1 T C - ReadM SNP 0007.scaffold00024 682393 1 A G - ReadM SNP 0007.scaffold00024 682490 1 G C - ScafM SNP 0007.scaffold00024 690495 1 C T scaffold30941 ScafM SNP 0007.scaffold00024 690522 1 T G scaffold30941 ScafM SNP 0007.scaffold00024 690575 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 690589 1 T C scaffold30941 ScafM INDEL 0007.scaffold00024 690592 7 ATATAAT ....... scaffold30941 ScafM INDEL 0007.scaffold00024 690600 4 ACAT .... scaffold30941 ScafM INDEL 0007.scaffold00024 690605 2 AA .. scaffold30941 ScafM INDEL 0007.scaffold00024 690611 4 GAAT .... scaffold30941 ScafM SNP 0007.scaffold00024 690617 1 A T scaffold30941 ScafM INDEL 0007.scaffold00024 690619 16 CACCCTCAATAACCAA ...............G scaffold30941 ScafM INDEL 0007.scaffold00024 690638 21 ATCTTACCACTTCCTTTCCCC ..................... scaffold30941 ScafM INDEL 0007.scaffold00024 690662 3 TTT ... scaffold30941 ScafM INDEL 0007.scaffold00024 690667 4 CTCG .... scaffold30941 ScafM INDEL 0007.scaffold00024 690672 7 TCTCTTA ......G scaffold30941 ScafM SNP 0007.scaffold00024 690700 1 G A scaffold30941 ScafM INDEL 0007.scaffold00024 690752 1 . T scaffold30941 ScafM SNP 0007.scaffold00024 690754 1 C A scaffold30941 ScafM INDEL 0007.scaffold00024 690757 5 ..... TCTGA scaffold30941 ScafM SNP 0007.scaffold00024 690770 1 T C scaffold30941 ScafM SNP 0007.scaffold00024 690772 1 C A scaffold30941 ScafM SNP 0007.scaffold00024 690778 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 690795 1 C T scaffold30941 ScafM SNP 0007.scaffold00024 690820 1 T A scaffold30941 ScafM INDEL 0007.scaffold00024 691050 8 AAGAGACA .......T scaffold30941 ScafM SNP 0007.scaffold00024 691101 1 C T scaffold30941 ScafM INDEL 0007.scaffold00024 691125 3 TTT ... scaffold30941 ScafM INDEL 0007.scaffold00024 691130 1 T . scaffold30941 ScafM INDEL 0007.scaffold00024 691135 2 TA .. scaffold30941 ScafM INDEL 0007.scaffold00024 691141 3 TTC ... scaffold30941 Both INDEL 0007.scaffold00024 691174 1 T . scaffold30941 Both SNP 0007.scaffold00024 691197 1 T C scaffold30941 ScafM SNP 0007.scaffold00024 691540 2 AT GC scaffold30941 ScafM SNP 0007.scaffold00024 691554 1 C G scaffold30941 ScafM INDEL 0007.scaffold00024 691566 2 .. TG scaffold30941 ScafM SNP 0007.scaffold00024 691587 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 691589 1 T C scaffold30941 ScafM SNP 0007.scaffold00024 691607 1 T C scaffold30941 ScafM SNP 0007.scaffold00024 691613 1 A G scaffold30941 ScafM SNP 0007.scaffold00024 691617 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 691630 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 691633 1 G C scaffold30941 ScafM SNP 0007.scaffold00024 691637 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 691749 1 G A scaffold30941 ScafM SNP 0007.scaffold00024 697354 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697372 1 G C scaffold2606 ScafM SNP 0007.scaffold00024 697377 1 G A scaffold2606 ScafM SNP 0007.scaffold00024 697412 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697461 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697735 1 A G scaffold2606 ScafM SNP 0007.scaffold00024 697758 1 A G scaffold2606 ScafM SNP 0007.scaffold00024 697769 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697772 1 A G scaffold2606 ScafM SNP 0007.scaffold00024 697784 1 A T scaffold2606 ScafM SNP 0007.scaffold00024 697802 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697821 1 C T scaffold2606 ScafM INDEL 0007.scaffold00024 697827 2 .A GT scaffold2606 ScafM SNP 0007.scaffold00024 697838 1 T A scaffold2606 ScafM SNP 0007.scaffold00024 697840 2 AG CT scaffold2606 ScafM SNP 0007.scaffold00024 697849 1 C T scaffold2606 ScafM SNP 0007.scaffold00024 697874 2 TG CA scaffold2606 ScafM SNP 0007.scaffold00024 697896 1 G T scaffold2606 ScafM SNP 0007.scaffold00024 697926 1 T C scaffold2606 ScafM SNP 0007.scaffold00024 697934 1 A G scaffold2606 ScafM INDEL 0007.scaffold00024 697936 1 A . scaffold2606 ScafM SNP 0007.scaffold00024 697942 1 G C scaffold2606 ScafM INDEL 0007.scaffold00024 697947 2 TT .. scaffold2606 ScafM SNP 0007.scaffold00024 697963 1 C A scaffold2606 ScafM INDEL 0007.scaffold00024 697986 1 G . scaffold2606 ScafM SNP 0007.scaffold00024 697988 1 T A scaffold2606 ScafM SNP 0007.scaffold00024 697990 1 T G scaffold2606 ScafM INDEL 0007.scaffold00024 698056 2 .. AG scaffold2606 ScafM INDEL 0007.scaffold00024 698066 1 . A scaffold2606 ScafM SNP 0007.scaffold00024 698076 2 CG AT scaffold2606 ScafM SNP 0007.scaffold00024 698095 1 A G scaffold2606 ScafM SNP 0007.scaffold00024 698100 1 G T scaffold2606 ScafM SNP 0007.scaffold00024 698102 1 T A scaffold2606 ScafM SNP 0007.scaffold00024 698120 1 G C scaffold2606 ScafM SNP 0007.scaffold00024 698137 1 T C scaffold2606 ScafM SNP 0007.scaffold00024 698154 1 A G scaffold2606 ScafM SNP 0007.scaffold00024 698180 1 A G scaffold2606 ScafM INDEL 0007.scaffold00024 698184 1 T . scaffold2606 ScafM SNP 0007.scaffold00024 698211 1 T A scaffold2606 ScafM SNP 0007.scaffold00024 698221 1 C A scaffold2606 ScafM INDEL 0007.scaffold00024 698229 2 .G CA scaffold2606 ScafM SNP 0007.scaffold00024 698299 2 GG CA scaffold2606 ScafM SNP 0007.scaffold00024 698324 1 T G scaffold2606 ScafM SNP 0007.scaffold00024 698360 1 T G scaffold2606 ScafM SNP 0007.scaffold00024 698378 2 CT AC scaffold2606 ScafM SNP 0007.scaffold00024 698381 1 C T scaffold2606 ScafM INDEL 0007.scaffold00024 698414 1 T . scaffold2606 ScafM SNP 0007.scaffold00024 698422 1 G A scaffold2606 ScafM SNP 0007.scaffold00024 698453 1 A G scaffold2606 ScafM INDEL 0007.scaffold00024 698487 5 ATTAA ..... scaffold2606 ScafM SNP 0007.scaffold00024 698512 1 G A scaffold2606 ScafM SNP 0007.scaffold00024 698533 1 C A scaffold2606 ScafM SNP 0007.scaffold00024 698538 1 G C scaffold2606 ScafM SNP 0007.scaffold00024 698562 1 T C scaffold2606 ScafM SNP 0007.scaffold00024 698571 1 A T scaffold2606 ScafM SNP 0007.scaffold00024 699290 1 T A scaffold2606 ScafM SNP 0007.scaffold00024 699316 1 C A scaffold2606 ScafM SNP 0007.scaffold00024 699352 1 T C scaffold2606 ScafM SNP 0007.scaffold00024 699400 1 C T scaffold2606 ScafM INDEL 0007.scaffold00024 699422 3 TTA ... scaffold2606 ScafM SNP 0007.scaffold00024 699465 1 A G scaffold2606 ReadM SNP 0007.scaffold00024 706695 1 G A - ReadM SNP 0007.scaffold00024 706726 1 G A - ReadM INDEL 0007.scaffold00024 706748 1 T . - ReadM SNP 0007.scaffold00024 706803 1 A G - ReadM SNP 0007.scaffold00024 707151 1 C T - ReadM SNP 0007.scaffold00024 707161 1 C T - ReadM SNP 0007.scaffold00024 707218 1 C T - ReadM SNP 0007.scaffold00024 707246 1 A C - ReadM SNP 0007.scaffold00024 707279 1 C T - ReadM SNP 0007.scaffold00024 707605 1 C T - ScafM SNP 0007.scaffold00024 710941 2 GT AA scaffold2606 ScafM SNP 0007.scaffold00024 710975 1 C G scaffold2606 ScafM SNP 0007.scaffold00024 711101 2 TC CT scaffold5364 ScafM SNP 0007.scaffold00024 711117 1 T C scaffold5364 ScafM SNP 0007.scaffold00024 711228 1 T C scaffold5364 ScafM SNP 0007.scaffold00024 711253 1 A G scaffold5364 ScafM INDEL 0007.scaffold00024 711304 10 .......... CTCTCTCCAC scaffold5364 ScafM INDEL 0007.scaffold00024 711305 1 . C scaffold5364 ScafM SNP 0007.scaffold00024 711341 1 A G scaffold5364 ScafM SNP 0007.scaffold00024 711440 1 G T scaffold5364 ScafM SNP 0007.scaffold00024 711451 1 G A scaffold5364 ScafM INDEL 0007.scaffold00024 711483 1 . A scaffold5364 ScafM SNP 0007.scaffold00024 711521 1 C T scaffold5364 ScafM SNP 0007.scaffold00024 711523 1 G A scaffold5364 ScafM SNP 0007.scaffold00024 711553 1 A G scaffold5364 ScafM SNP 0007.scaffold00024 711559 1 C T scaffold5364 ScafM INDEL 0007.scaffold00024 711628 1 T . scaffold5364 ScafM SNP 0007.scaffold00024 711643 1 A G scaffold5364 ScafM SNP 0007.scaffold00024 711646 1 A G scaffold5364 ScafM INDEL 0007.scaffold00024 715133 2 TT .. scaffold707 ScafM SNP 0007.scaffold00024 715360 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 715476 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715497 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 715517 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715530 1 T G scaffold5700 ScafM INDEL 0007.scaffold00024 715544 1 C . scaffold5700 ScafM SNP 0007.scaffold00024 715564 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 715577 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715634 1 A T scaffold5700 ScafM SNP 0007.scaffold00024 715649 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 715675 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 715733 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 715747 2 GG TA scaffold5700 ScafM INDEL 0007.scaffold00024 715761 3 TAT ..G scaffold5700 ScafM INDEL 0007.scaffold00024 715767 3 ACA ... scaffold5700 ScafM SNP 0007.scaffold00024 715773 1 T C scaffold5700 ScafM INDEL 0007.scaffold00024 715779 2 .. AT scaffold5700 ScafM SNP 0007.scaffold00024 715805 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715814 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 715852 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715859 2 CC AT scaffold5700 ScafM SNP 0007.scaffold00024 715881 1 G C scaffold5700 ScafM SNP 0007.scaffold00024 715905 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 715923 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715951 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715955 2 AA GG scaffold5700 ScafM SNP 0007.scaffold00024 715976 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 715983 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715989 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 715991 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 716006 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 716010 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 716017 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 716021 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 716072 1 C A scaffold5700 ScafM SNP 0007.scaffold00024 716080 1 A T scaffold5700 ScafM SNP 0007.scaffold00024 716084 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 716103 1 A C scaffold5700 ScafM SNP 0007.scaffold00024 716116 2 GC AT scaffold5700 ScafM SNP 0007.scaffold00024 716130 1 T C scaffold5700 ScafM INDEL 0007.scaffold00024 716151 1 . G scaffold5700 ScafM SNP 0007.scaffold00024 716165 1 A G scaffold5700 ReadM SNP 0007.scaffold00024 718491 1 T C - ReadM INDEL 0007.scaffold00024 718494 1 . C - ReadM SNP 0007.scaffold00024 718519 1 C T - ReadM SNP 0007.scaffold00024 720059 1 A G - ReadM SNP 0007.scaffold00024 720099 1 A G - ReadM SNP 0007.scaffold00024 720217 1 T G - ReadM SNP 0007.scaffold00024 720755 1 A T - ReadM SNP 0007.scaffold00024 720798 1 A G - ReadM SNP 0007.scaffold00024 720840 1 C G - ReadM SNP 0007.scaffold00024 720885 1 G A - ReadM SNP 0007.scaffold00024 720892 1 G C - ReadM SNP 0007.scaffold00024 720918 1 G T - ReadM SNP 0007.scaffold00024 720991 1 C T - ReadM SNP 0007.scaffold00024 721217 1 G A - ReadM SNP 0007.scaffold00024 721222 1 C T - ReadM INDEL 0007.scaffold00024 721256 1 . T - ReadM SNP 0007.scaffold00024 721291 1 T C - ReadM SNP 0007.scaffold00024 721336 1 C A - ReadM SNP 0007.scaffold00024 721344 1 C T - ReadM SNP 0007.scaffold00024 721381 1 T A - ReadM SNP 0007.scaffold00024 721422 1 C T - ReadM SNP 0007.scaffold00024 721470 1 T G - ReadM SNP 0007.scaffold00024 721485 1 A G - ReadM SNP 0007.scaffold00024 728831 1 C A - ReadM SNP 0007.scaffold00024 728885 1 C T - ReadM SNP 0007.scaffold00024 728992 1 G A - ReadM SNP 0007.scaffold00024 729222 1 A T - ReadM SNP 0007.scaffold00024 729230 1 C T - ReadM SNP 0007.scaffold00024 729319 1 T C - ReadM SNP 0007.scaffold00024 729327 1 C T - ReadM SNP 0007.scaffold00024 729347 1 A G - ReadM SNP 0007.scaffold00024 729414 1 A G - ReadM SNP 0007.scaffold00024 729441 1 G A - ReadM SNP 0007.scaffold00024 729463 1 A G - ReadM SNP 0007.scaffold00024 729645 1 T C - ReadM SNP 0007.scaffold00024 729653 1 G C - ReadM SNP 0007.scaffold00024 729686 1 A G - ReadM SNP 0007.scaffold00024 729743 1 G T - ReadM SNP 0007.scaffold00024 729784 1 C A - ReadM SNP 0007.scaffold00024 729788 1 C T - ReadM SNP 0007.scaffold00024 729872 1 A T - ReadM SNP 0007.scaffold00024 729884 1 C G - ReadM SNP 0007.scaffold00024 730162 1 T C - ReadM SNP 0007.scaffold00024 730179 1 C T - ReadM SNP 0007.scaffold00024 730207 1 A G - ReadM SNP 0007.scaffold00024 730296 1 C G - ReadM SNP 0007.scaffold00024 730339 1 C T - ReadM INDEL 0007.scaffold00024 730357 1 C . - ReadM SNP 0007.scaffold00024 730382 1 C A - ReadM SNP 0007.scaffold00024 730786 1 T A - ReadM SNP 0007.scaffold00024 730869 1 C T - ReadM SNP 0007.scaffold00024 730908 1 C T - ReadM SNP 0007.scaffold00024 731200 1 C T - ReadM SNP 0007.scaffold00024 731227 1 T C - ReadM SNP 0007.scaffold00024 731295 1 A T - ReadM SNP 0007.scaffold00024 731721 1 A G - ReadM SNP 0007.scaffold00024 731751 1 A G - ReadM SNP 0007.scaffold00024 731842 1 G A - ScafM SNP 0007.scaffold00024 732194 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 732200 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 732210 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 732216 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 732228 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 732235 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 732304 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 732316 1 A T scaffold5700 ScafM INDEL 0007.scaffold00024 732339 9 ......... ACATATTCA scaffold5700 ScafM SNP 0007.scaffold00024 732381 2 AT GC scaffold5700 Both SNP 0007.scaffold00024 732399 1 C A scaffold5700 Both SNP 0007.scaffold00024 732470 1 A G scaffold5700 Both SNP 0007.scaffold00024 732543 1 C T scaffold5700 ReadM SNP 0007.scaffold00024 732709 1 C G - ReadM SNP 0007.scaffold00024 732865 1 G A - ReadM SNP 0007.scaffold00024 732968 1 C A - ReadM SNP 0007.scaffold00024 732970 1 T G - ReadM SNP 0007.scaffold00024 734167 1 T C - ReadM SNP 0007.scaffold00024 734243 1 T C - ReadM SNP 0007.scaffold00024 734309 1 T C - ReadM SNP 0007.scaffold00024 734316 1 T C - ReadM SNP 0007.scaffold00024 734355 1 G A - ReadM SNP 0007.scaffold00024 734377 1 A C - ReadM SNP 0007.scaffold00024 734410 1 G A - ReadM SNP 0007.scaffold00024 734548 1 A G - ReadM SNP 0007.scaffold00024 734612 1 A C - ReadM SNP 0007.scaffold00024 734626 1 C G - ScafM SNP 0007.scaffold00024 736672 1 A G scaffold3645 ReadM SNP 0007.scaffold00024 736858 1 T A - ReadM SNP 0007.scaffold00024 736862 1 G A - ScafM SNP 0007.scaffold00024 744569 1 C T scaffold13737 ScafM SNP 0007.scaffold00024 744579 1 G A scaffold13737 ScafM SNP 0007.scaffold00024 744609 1 A C scaffold13737 ScafM SNP 0007.scaffold00024 744648 1 C A scaffold13737 ScafM SNP 0007.scaffold00024 744661 1 A T scaffold13737 ScafM SNP 0007.scaffold00024 744674 1 G A scaffold13737 ScafM SNP 0007.scaffold00024 744706 1 C A scaffold13737 ScafM SNP 0007.scaffold00024 744759 1 C A scaffold13737 ScafM SNP 0007.scaffold00024 744934 1 G T scaffold6541 ScafM SNP 0007.scaffold00024 744941 1 A T scaffold6541 ScafM SNP 0007.scaffold00024 744946 1 A G scaffold6541 ScafM SNP 0007.scaffold00024 744955 1 T G scaffold6541 ScafM INDEL 0007.scaffold00024 744961 1 . T scaffold6541 ScafM SNP 0007.scaffold00024 744996 1 C T scaffold6541 ScafM SNP 0007.scaffold00024 744998 1 G A scaffold6541 ScafM INDEL 0007.scaffold00024 744999 1 . A scaffold6541 ScafM SNP 0007.scaffold00024 745005 1 C T scaffold6541 ScafM SNP 0007.scaffold00024 745016 1 A T scaffold6541 ScafM SNP 0007.scaffold00024 745022 1 G A scaffold6541 ReadM SNP 0007.scaffold00024 759659 1 A C - ReadM SNP 0007.scaffold00024 759665 1 C A - ReadM SNP 0007.scaffold00024 759751 1 A G - ReadM SNP 0007.scaffold00024 759753 1 A C - ReadM SNP 0007.scaffold00024 760146 1 C T - ReadM SNP 0007.scaffold00024 760151 1 A T - ReadM SNP 0007.scaffold00024 760176 1 T C - ReadM SNP 0007.scaffold00024 760334 1 T G - ReadM SNP 0007.scaffold00024 760409 1 A T - ReadM SNP 0007.scaffold00024 760629 1 G C - ReadM SNP 0007.scaffold00024 760649 1 G T - ReadM SNP 0007.scaffold00024 760660 1 C T - ReadM SNP 0007.scaffold00024 760700 1 C T - ReadM SNP 0007.scaffold00024 760721 1 A T - ReadM SNP 0007.scaffold00024 760860 1 A T - ReadM SNP 0007.scaffold00024 760876 1 G T - ReadM SNP 0007.scaffold00024 760950 1 C T - ReadM SNP 0007.scaffold00024 760995 1 A T - ReadM INDEL 0007.scaffold00024 761032 1 . T - ReadM SNP 0007.scaffold00024 761046 1 T C - ReadM SNP 0007.scaffold00024 761090 1 C T - ReadM SNP 0007.scaffold00024 761385 1 T C - ReadM SNP 0007.scaffold00024 761403 1 C T - ReadM SNP 0007.scaffold00024 761414 1 A G - ScafM SNP 0007.scaffold00024 761714 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 761752 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 761756 1 A C scaffold5700 ScafM SNP 0007.scaffold00024 761766 1 C A scaffold5700 ScafM SNP 0007.scaffold00024 761944 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 761984 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 762017 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 762041 1 G C scaffold5700 ScafM INDEL 0007.scaffold00024 774271 2 TT .. scaffold5700 ScafM SNP 0007.scaffold00024 774295 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 774332 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 774338 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 774382 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 774389 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 774400 1 C A scaffold5700 ScafM SNP 0007.scaffold00024 774406 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 774412 1 T C scaffold5700 ScafM INDEL 0007.scaffold00024 774441 3 ... AGC scaffold5700 ScafM SNP 0007.scaffold00024 774489 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 774809 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 774813 1 T C scaffold5700 Both SNP 0007.scaffold00024 774935 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 775279 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 775284 1 C A scaffold5700 ScafM SNP 0007.scaffold00024 775299 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 775304 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 775321 1 A T scaffold5700 ScafM SNP 0007.scaffold00024 775335 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 775346 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 775362 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 775412 1 G T scaffold5700 ScafM INDEL 0007.scaffold00024 775428 1 A . scaffold5700 ScafM SNP 0007.scaffold00024 775501 1 C G scaffold5700 ScafM INDEL 0007.scaffold00024 775549 2 .. TT scaffold5700 ScafM SNP 0007.scaffold00024 775551 1 A T scaffold5700 ScafM SNP 0007.scaffold00024 775569 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 775589 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 775622 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 775853 1 A C scaffold5700 ScafM INDEL 0007.scaffold00024 775862 1 . T scaffold5700 ScafM SNP 0007.scaffold00024 775883 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 775973 1 T A scaffold5700 ScafM INDEL 0007.scaffold00024 775995 1 T . scaffold5700 ScafM INDEL 0007.scaffold00024 776001 1 A . scaffold5700 ScafM INDEL 0007.scaffold00024 776010 1 A . scaffold5700 ScafM SNP 0007.scaffold00024 776062 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 776071 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 776074 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 776110 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 776165 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 776175 1 G C scaffold5700 ScafM SNP 0007.scaffold00024 776212 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 776219 2 CG TA scaffold5700 ScafM SNP 0007.scaffold00024 776228 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 776248 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 776287 1 G T scaffold5700 ScafM SNP 0007.scaffold00024 776297 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 776320 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 776323 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 776358 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 776692 1 A T scaffold5700 ScafM INDEL 0007.scaffold00024 776710 1 . G scaffold5700 ScafM SNP 0007.scaffold00024 776748 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 776750 1 A G scaffold5700 Both SNP 0007.scaffold00024 777001 1 T G scaffold5700 Both SNP 0007.scaffold00024 777015 1 A G scaffold5700 Both SNP 0007.scaffold00024 777060 1 T C scaffold5700 ScafM INDEL 0007.scaffold00024 777111 1 . T scaffold5700 ScafM SNP 0007.scaffold00024 777206 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 777233 1 C G scaffold5700 ScafM SNP 0007.scaffold00024 777236 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 777240 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 777253 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 777257 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 777319 1 T G scaffold5700 ScafM SNP 0007.scaffold00024 777334 1 A G scaffold5700 Both INDEL 0007.scaffold00024 777358 2 TA .. scaffold5700 Both SNP 0007.scaffold00024 777403 1 C T scaffold5700 Both SNP 0007.scaffold00024 777483 1 G T scaffold5700 ScafM SNP 0007.scaffold00024 777526 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 777528 1 T A scaffold5700 ScafM SNP 0007.scaffold00024 777574 1 G T scaffold5700 Both SNP 0007.scaffold00024 777588 1 C T scaffold5700 Both SNP 0007.scaffold00024 777627 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 777640 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 777658 1 T G scaffold5700 ScafM INDEL 0007.scaffold00024 777705 1 . A scaffold5700 ScafM SNP 0007.scaffold00024 777711 1 T A scaffold5700 ScafM INDEL 0007.scaffold00024 777739 3 CGT ... scaffold5700 ScafM INDEL 0007.scaffold00024 777745 6 TGTTTC ...... scaffold5700 ScafM SNP 0007.scaffold00024 777755 2 GT AA scaffold5700 ScafM SNP 0007.scaffold00024 777760 1 T A scaffold5700 ScafM SNP 0007.scaffold00024 777766 1 G T scaffold5700 ScafM SNP 0007.scaffold00024 777775 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 777777 1 G A scaffold5700 ScafM SNP 0007.scaffold00024 777789 1 C T scaffold5700 ScafM SNP 0007.scaffold00024 777809 1 T A scaffold5700 ReadM SNP 0007.scaffold00024 777847 1 T C - Both SNP 0007.scaffold00024 777886 1 A G scaffold5700 Both SNP 0007.scaffold00024 777914 1 C T scaffold5700 ReadM SNP 0007.scaffold00024 777962 1 A C - ReadM SNP 0007.scaffold00024 778040 1 C T - ReadM SNP 0007.scaffold00024 778045 1 C A - ReadM SNP 0007.scaffold00024 778238 1 T A - ScafM INDEL 0007.scaffold00024 778635 1 . A scaffold5700 ReadM SNP 0007.scaffold00024 778705 1 T C - ScafM SNP 0007.scaffold00024 778979 1 A G scaffold5700 ScafM SNP 0007.scaffold00024 778989 1 A G scaffold5700 ReadM SNP 0007.scaffold00024 779202 1 G A - ReadM SNP 0007.scaffold00024 779260 1 C A - Both SNP 0007.scaffold00024 779440 1 A T scaffold5700 Both SNP 0007.scaffold00024 779499 1 A G scaffold5700 Both SNP 0007.scaffold00024 779570 1 T A scaffold5700 ReadM SNP 0007.scaffold00024 779575 1 G A - ScafM SNP 0007.scaffold00024 779682 1 C A scaffold5700 ScafM SNP 0007.scaffold00024 779716 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 779727 1 T C scaffold5700 ScafM SNP 0007.scaffold00024 779734 1 G C scaffold5700 ScafM SNP 0007.scaffold00024 779785 1 A C scaffold5700 ScafM SNP 0007.scaffold00024 779788 1 G T scaffold5700 ScafM SNP 0007.scaffold00024 779807 1 A G scaffold5700 ReadM SNP 0007.scaffold00024 779980 1 T A - ReadM SNP 0007.scaffold00024 779995 1 G T - Both INDEL 0007.scaffold00024 780105 2 .. AC scaffold5700 ScafM INDEL 0007.scaffold00024 780172 2 .. 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ReadM SNP 0007.scaffold00024 793202 1 C A - ReadM SNP 0007.scaffold00024 793272 1 A G - ReadM SNP 0007.scaffold00024 793306 1 T A - ReadM SNP 0007.scaffold00024 793324 1 T C - ReadM SNP 0007.scaffold00024 793408 1 G A - ReadM SNP 0007.scaffold00024 793421 1 C T - ReadM SNP 0007.scaffold00024 793497 1 A G - ReadM SNP 0007.scaffold00024 793502 1 C A - ReadM SNP 0007.scaffold00024 793593 1 T A - ReadM SNP 0007.scaffold00024 793807 1 C T - ReadM SNP 0007.scaffold00024 793823 1 T A - ReadM SNP 0007.scaffold00024 793866 1 A G - ReadM SNP 0007.scaffold00024 793955 1 C A - ReadM SNP 0007.scaffold00024 794042 1 A T - ReadM SNP 0007.scaffold00024 794064 1 T A - ReadM SNP 0007.scaffold00024 794133 1 T G - ReadM SNP 0007.scaffold00024 794175 1 A C - ReadM SNP 0007.scaffold00024 794193 1 G T - ReadM SNP 0007.scaffold00024 794237 1 C T - ReadM SNP 0007.scaffold00024 794260 1 G A - ReadM SNP 0007.scaffold00024 794282 1 C T - ReadM SNP 0007.scaffold00024 794336 1 G A - ReadM SNP 0007.scaffold00024 794455 1 A G - ReadM SNP 0007.scaffold00024 794522 1 G A - ReadM SNP 0007.scaffold00024 794671 1 C G - ReadM SNP 0007.scaffold00024 794674 1 A G - ReadM SNP 0007.scaffold00024 794758 1 T C - ReadM SNP 0007.scaffold00024 794867 1 A G - ReadM SNP 0007.scaffold00024 794897 1 G C - ScafM SNP 0007.scaffold00024 795357 1 C T scaffold7082 ScafM SNP 0007.scaffold00024 795362 1 A C scaffold7082 ScafM SNP 0007.scaffold00024 807039 2 TT GC scaffold4314 ScafM SNP 0007.scaffold00024 807059 1 G T scaffold4314 ScafM SNP 0007.scaffold00024 807065 1 A G scaffold4314 ScafM SNP 0007.scaffold00024 807142 1 A C scaffold4314 ReadM SNP 0007.scaffold00024 810160 1 A G - ReadM SNP 0007.scaffold00024 810299 1 T G - ReadM SNP 0007.scaffold00024 810370 1 C T - ReadM SNP 0007.scaffold00024 810493 1 G A - ReadM SNP 0007.scaffold00024 810506 1 C T - ReadM SNP 0007.scaffold00024 810642 1 T A - ReadM SNP 0007.scaffold00024 835027 1 C T - ReadM SNP 0007.scaffold00024 835056 1 T C - ReadM SNP 0007.scaffold00024 835113 1 C T - ReadM SNP 0007.scaffold00024 835144 1 C G - ReadM SNP 0007.scaffold00024 835265 1 G C - ReadM SNP 0007.scaffold00024 835366 1 C T - ScafM SNP 0007.scaffold00024 835416 1 C T scaffold223 Both INDEL 0007.scaffold00024 835464 1 . 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TT scaffold2979 ScafM SNP 0007.scaffold00024 842557 2 TG AT scaffold2979 ScafM SNP 0007.scaffold00024 842654 1 G T scaffold2979 ScafM SNP 0007.scaffold00024 842693 1 T G scaffold2979 ScafM SNP 0007.scaffold00024 842757 1 G A scaffold2979 ScafM SNP 0007.scaffold00024 842775 1 G C scaffold2979 ScafM SNP 0007.scaffold00024 842779 1 G C scaffold2979 ScafM SNP 0007.scaffold00024 842793 1 G A scaffold2979 ReadM SNP 0007.scaffold00024 843548 1 T C - ReadM SNP 0007.scaffold00024 843615 1 A G - ReadM SNP 0007.scaffold00024 843649 1 A G - ReadM SNP 0007.scaffold00024 843666 1 G A - ReadM SNP 0007.scaffold00024 844086 1 A C - ReadM SNP 0007.scaffold00024 844114 1 T C - ReadM SNP 0007.scaffold00024 844540 1 T C - Both SNP 0007.scaffold00024 844766 1 A T scaffold223 ScafM SNP 0007.scaffold00024 844778 1 T A scaffold223 ScafM SNP 0007.scaffold00024 844783 1 G C scaffold223 ScafM SNP 0007.scaffold00024 844785 1 A G scaffold223 ScafM SNP 0007.scaffold00024 844806 1 C G scaffold223 ScafM SNP 0007.scaffold00024 844815 1 A G scaffold223 ScafM SNP 0007.scaffold00024 844832 1 A G scaffold223 ScafM SNP 0007.scaffold00024 844848 1 C T scaffold223 ScafM SNP 0007.scaffold00024 844876 1 G A scaffold223 ScafM SNP 0007.scaffold00024 844893 1 G T scaffold223 ScafM SNP 0007.scaffold00024 844912 1 G C scaffold223 ScafM SNP 0007.scaffold00024 844999 1 T C scaffold223 ScafM SNP 0007.scaffold00024 845008 1 G A scaffold223 ScafM SNP 0007.scaffold00024 845105 1 C A scaffold223 ScafM SNP 0007.scaffold00024 845115 1 G C scaffold223 ReadM SNP 0007.scaffold00024 845493 1 C T - ReadM SNP 0007.scaffold00024 845687 1 C T - Both SNP 0007.scaffold00024 846418 1 C T scaffold223 ScafM SNP 0007.scaffold00024 846445 1 T C scaffold223 ScafM SNP 0007.scaffold00024 846489 1 C G scaffold223 ScafM INDEL 0007.scaffold00024 846705 32 ACATGCTAAATACAATATCTTCTACATGCTAA ................................ scaffold223 Both INDEL 0007.scaffold00024 846845 1 . T scaffold223 Both SNP 0007.scaffold00024 846866 1 T A scaffold223 ScafM SNP 0007.scaffold00024 846938 1 C T scaffold223 ScafM SNP 0007.scaffold00024 846958 1 A G scaffold223 Both SNP 0007.scaffold00024 846966 1 C T scaffold223 ScafM SNP 0007.scaffold00024 846986 1 A C scaffold223 ScafM SNP 0007.scaffold00024 847000 1 G A scaffold223 Both SNP 0007.scaffold00024 847204 1 T C scaffold223 Both SNP 0007.scaffold00024 847220 1 C T scaffold223 ScafM SNP 0007.scaffold00024 847236 1 A C scaffold223 ScafM SNP 0007.scaffold00024 847243 1 T G scaffold223 ScafM SNP 0007.scaffold00024 847253 1 A G scaffold223 ScafM SNP 0007.scaffold00024 847378 1 C T scaffold223 ScafM SNP 0007.scaffold00024 847389 1 A G scaffold223 ScafM SNP 0007.scaffold00024 847394 1 G A scaffold223 Both SNP 0007.scaffold00024 847417 1 T C scaffold223 Both SNP 0007.scaffold00024 847439 1 C T scaffold223 Both SNP 0007.scaffold00024 847458 1 C T scaffold223 ScafM SNP 0007.scaffold00024 847569 1 T C scaffold223 ScafM SNP 0007.scaffold00024 847599 1 G T scaffold223 ReadM INDEL 0007.scaffold00024 847709 1 A . - Both INDEL 0007.scaffold00024 847713 1 T . scaffold223 ScafM SNP 0007.scaffold00024 847803 1 A T scaffold223 ScafM SNP 0007.scaffold00024 847855 1 T C scaffold223 ScafM SNP 0007.scaffold00024 847871 1 T C scaffold223 ScafM SNP 0007.scaffold00024 847912 1 G T scaffold223 ScafM SNP 0007.scaffold00024 847972 1 G A scaffold223 ScafM SNP 0007.scaffold00024 847997 1 A C scaffold223 ScafM SNP 0007.scaffold00024 848027 1 T C scaffold223 ScafM SNP 0007.scaffold00024 848044 1 T C scaffold223 ScafM SNP 0007.scaffold00024 848063 1 A G scaffold223 ScafM SNP 0007.scaffold00024 848067 1 A C scaffold223 ScafM SNP 0007.scaffold00024 848153 1 A C scaffold223 ScafM SNP 0007.scaffold00024 848157 1 C T scaffold223 ScafM SNP 0007.scaffold00024 848176 1 G A scaffold223 ReadM SNP 0007.scaffold00024 849713 1 G T - ReadM SNP 0007.scaffold00024 849759 1 A G - ReadM SNP 0007.scaffold00024 849765 1 T C - ReadM SNP 0007.scaffold00024 849924 1 C T - ReadM SNP 0007.scaffold00024 849932 1 C T - ReadM SNP 0007.scaffold00024 850249 1 G A - ReadM SNP 0007.scaffold00024 850492 1 A G - ReadM SNP 0007.scaffold00024 850516 1 G A - ReadM SNP 0007.scaffold00024 850528 1 G A - ReadM SNP 0007.scaffold00024 850700 1 C T - ReadM INDEL 0007.scaffold00024 850730 1 . A - ReadM SNP 0007.scaffold00024 850931 1 T C - ReadM SNP 0007.scaffold00024 851011 1 T C - ReadM INDEL 0007.scaffold00024 851176 1 G . - ReadM SNP 0007.scaffold00024 851249 1 A C - ReadM SNP 0007.scaffold00024 851442 1 C T - ReadM SNP 0007.scaffold00024 851453 1 T C - ReadM SNP 0007.scaffold00024 851509 1 C T - ReadM SNP 0007.scaffold00024 851561 1 G A - ReadM SNP 0007.scaffold00024 851570 1 A G - ReadM SNP 0007.scaffold00024 851613 1 T G - ReadM SNP 0007.scaffold00024 851654 1 G T - ReadM SNP 0007.scaffold00024 851682 1 A G - ReadM SNP 0007.scaffold00024 851810 1 T C - ReadM SNP 0007.scaffold00024 851951 1 C T - ReadM SNP 0007.scaffold00024 852021 1 T C - ReadM INDEL 0007.scaffold00024 852070 1 . T - ReadM SNP 0007.scaffold00024 852212 1 C T - ReadM SNP 0007.scaffold00024 852222 1 C T - ReadM SNP 0007.scaffold00024 852455 1 A G - ReadM SNP 0007.scaffold00024 852465 1 T G - ReadM SNP 0007.scaffold00024 852656 1 G A - ReadM SNP 0007.scaffold00024 852698 1 G A - ReadM SNP 0007.scaffold00024 852728 1 A T - ReadM SNP 0007.scaffold00024 852902 1 A C - ReadM SNP 0007.scaffold00024 852911 1 G A - ReadM SNP 0007.scaffold00024 852940 1 A G - ReadM SNP 0007.scaffold00024 853094 1 G A - ReadM SNP 0007.scaffold00024 853137 1 G A - ReadM SNP 0007.scaffold00024 853228 1 A T - ReadM SNP 0007.scaffold00024 853252 1 T C - ReadM SNP 0007.scaffold00024 853361 1 T C - ReadM SNP 0007.scaffold00024 853604 1 C A - ReadM SNP 0007.scaffold00024 853613 1 G T - ReadM SNP 0007.scaffold00024 853637 1 C A - ReadM SNP 0007.scaffold00024 854110 1 T C - ReadM SNP 0007.scaffold00024 854155 1 A G - ReadM SNP 0007.scaffold00024 855035 1 C T - ReadM SNP 0007.scaffold00024 855070 1 A G - ReadM SNP 0007.scaffold00024 855127 1 A G - ReadM SNP 0007.scaffold00024 855133 1 G T - ReadM INDEL 0007.scaffold00024 855206 1 . G - ReadM SNP 0007.scaffold00024 855217 1 G A - ReadM SNP 0007.scaffold00024 855254 1 T G - ReadM SNP 0007.scaffold00024 855282 1 T C - ReadM SNP 0007.scaffold00024 855350 1 G A - ReadM SNP 0007.scaffold00024 855378 1 G C - ReadM SNP 0007.scaffold00024 855460 1 C T - ReadM SNP 0007.scaffold00024 855650 1 A C - ReadM SNP 0007.scaffold00024 855785 1 A G - ReadM SNP 0007.scaffold00024 855851 1 G T - ReadM SNP 0007.scaffold00024 855868 1 C G - ReadM SNP 0007.scaffold00024 855881 1 C T - ReadM INDEL 0007.scaffold00024 856106 1 . G - ReadM SNP 0007.scaffold00024 856161 1 C T - ReadM SNP 0007.scaffold00024 856268 1 C T - ReadM SNP 0007.scaffold00024 856301 1 C G - ReadM SNP 0007.scaffold00024 856330 1 G T - ReadM SNP 0007.scaffold00024 856380 1 C T - ReadM SNP 0007.scaffold00024 856577 1 T A - ReadM SNP 0007.scaffold00024 856602 1 T C - ReadM INDEL 0007.scaffold00024 856611 1 . G - ReadM SNP 0007.scaffold00024 856714 1 C A - ReadM SNP 0007.scaffold00024 856751 1 G A - ReadM SNP 0007.scaffold00024 856760 1 T C - ReadM SNP 0007.scaffold00024 856803 1 T C - ReadM SNP 0007.scaffold00024 856873 1 C A - ReadM SNP 0007.scaffold00024 856933 1 C G - ReadM SNP 0007.scaffold00024 856945 1 C T - ReadM SNP 0007.scaffold00024 857035 1 A C - ReadM SNP 0007.scaffold00024 857056 1 C T - ReadM SNP 0007.scaffold00024 857089 1 A C - ReadM SNP 0007.scaffold00024 857206 1 G T - ReadM SNP 0007.scaffold00024 857228 1 C T - ReadM SNP 0007.scaffold00024 857239 1 G A - ReadM SNP 0007.scaffold00024 857339 1 C T - ReadM SNP 0007.scaffold00024 857356 1 T G - ReadM SNP 0007.scaffold00024 857463 1 T C - ReadM SNP 0007.scaffold00024 857475 1 T C - ReadM SNP 0007.scaffold00024 857553 1 A T - ReadM SNP 0007.scaffold00024 857571 1 C T - ReadM SNP 0007.scaffold00024 857727 1 C A - ReadM SNP 0007.scaffold00024 857735 1 G A - ScafM SNP 0007.scaffold00024 857825 1 A T scaffold223 Both INDEL 0007.scaffold00024 858090 1 . T scaffold223 Both SNP 0007.scaffold00024 858165 1 T C scaffold223 ScafM INDEL 0007.scaffold00024 858179 2 .. TA scaffold223 Both SNP 0007.scaffold00024 858347 1 A C scaffold223 Both SNP 0007.scaffold00024 858469 1 G A scaffold223 Both SNP 0007.scaffold00024 858499 1 C T scaffold223 Both SNP 0007.scaffold00024 858519 1 C T scaffold223 Both SNP 0007.scaffold00024 858550 1 T A scaffold223 Both SNP 0007.scaffold00024 858577 1 T C scaffold223 Both INDEL 0007.scaffold00024 858584 1 . C scaffold223 Both SNP 0007.scaffold00024 858646 1 T C scaffold223 Both SNP 0007.scaffold00024 858735 1 C T scaffold223 ReadM SNP 0007.scaffold00024 858751 1 T A - Both SNP 0007.scaffold00024 858922 1 A G scaffold223 Both SNP 0007.scaffold00024 858925 1 G A scaffold223 Both INDEL 0007.scaffold00024 858957 1 . C scaffold223 ScafM INDEL 0007.scaffold00024 858985 1 . T scaffold223 ReadM SNP 0007.scaffold00024 859230 1 A G - Both SNP 0007.scaffold00024 859410 1 T A scaffold223 Both SNP 0007.scaffold00024 859422 1 C T scaffold223 Both SNP 0007.scaffold00024 859447 1 C T scaffold223 ScafM SNP 0007.scaffold00024 859508 2 AT CC scaffold223 Both SNP 0007.scaffold00024 859537 1 G T scaffold223 ScafM SNP 0007.scaffold00024 859560 1 C T scaffold223 ReadM SNP 0007.scaffold00024 859657 1 G C - ReadM SNP 0007.scaffold00024 859773 1 C A - ReadM SNP 0007.scaffold00024 859895 1 G T - ReadM SNP 0007.scaffold00024 859981 1 G A - ReadM SNP 0007.scaffold00024 860033 1 C T - ReadM SNP 0007.scaffold00024 860125 1 T C - ReadM SNP 0007.scaffold00024 860233 1 A G - ReadM SNP 0007.scaffold00024 860255 1 G A - ReadM SNP 0007.scaffold00024 860258 1 C T - ReadM SNP 0007.scaffold00024 860355 1 C G - ReadM SNP 0007.scaffold00024 860410 1 T A - ReadM SNP 0007.scaffold00024 860718 1 A G - ReadM SNP 0007.scaffold00024 860721 1 C T - Both INDEL 0007.scaffold00024 860795 1 . T scaffold223 ScafM INDEL 0007.scaffold00024 860824 2 .. AA scaffold223 ReadM SNP 0007.scaffold00024 860841 1 A T - ScafM SNP 0007.scaffold00024 860974 1 C T scaffold223 ScafM SNP 0007.scaffold00024 861302 1 A C scaffold223 ScafM INDEL 0007.scaffold00024 861322 1 A . scaffold223 ScafM INDEL 0007.scaffold00024 861330 2 .C TT scaffold223 ScafM INDEL 0007.scaffold00024 861336 1 . T scaffold223 Both SNP 0007.scaffold00024 861562 1 C T scaffold223 Both SNP 0007.scaffold00024 861589 1 A G scaffold223 Both SNP 0007.scaffold00024 861613 1 A G scaffold223 Both SNP 0007.scaffold00024 861638 1 G A scaffold223 Both SNP 0007.scaffold00024 861847 1 T C scaffold223 Both SNP 0007.scaffold00024 861914 1 A G scaffold223 Both INDEL 0007.scaffold00024 861938 1 G . scaffold223 ScafM SNP 0007.scaffold00024 861942 1 G T scaffold223 Both SNP 0007.scaffold00024 862122 1 C T scaffold223 Both SNP 0007.scaffold00024 862129 1 T C scaffold223 ScafM SNP 0007.scaffold00024 862133 1 T A scaffold223 Both SNP 0007.scaffold00024 862533 1 T A scaffold223 Both SNP 0007.scaffold00024 862541 1 A C scaffold223 Both SNP 0007.scaffold00024 862673 1 T G scaffold223 Both SNP 0007.scaffold00024 862797 1 G A scaffold223 Both SNP 0007.scaffold00024 862853 1 C T scaffold223 Both SNP 0007.scaffold00024 863876 1 T A scaffold223 Both SNP 0007.scaffold00024 864061 1 C A scaffold223 Both SNP 0007.scaffold00024 864533 1 A G scaffold223 Both SNP 0007.scaffold00024 864814 1 G A scaffold223 Both SNP 0007.scaffold00024 865157 1 G A scaffold223 Both SNP 0007.scaffold00024 865495 1 G T scaffold223 Both SNP 0007.scaffold00024 865515 1 G T scaffold223 Both SNP 0007.scaffold00024 865927 1 G T scaffold223 Both SNP 0007.scaffold00024 866009 1 C G scaffold223 ScafM SNP 0007.scaffold00024 866320 1 G T scaffold223 ScafM SNP 0007.scaffold00024 866877 1 G A scaffold223 ScafM INDEL 0007.scaffold00024 867540 7 GCCTGTA ....... scaffold223 ScafM INDEL 0007.scaffold00024 867750 3 ... TAA scaffold223 ScafM SNP 0007.scaffold00024 867771 1 G A scaffold223 Both SNP 0007.scaffold00024 868017 1 A G scaffold223 Both SNP 0007.scaffold00024 868577 1 G C scaffold223 Both SNP 0007.scaffold00024 869041 1 G C scaffold223 ReadM INDEL 0007.scaffold00024 869092 3 AAG ... - Both SNP 0007.scaffold00024 869272 1 T A scaffold223 Both SNP 0007.scaffold00024 869346 1 A T scaffold223 Both SNP 0007.scaffold00024 869432 1 T C scaffold223 Both INDEL 0007.scaffold00024 869440 1 A . scaffold223 Both SNP 0007.scaffold00024 870186 1 A G scaffold223 Both SNP 0007.scaffold00024 870627 1 C T scaffold223 Both SNP 0007.scaffold00024 871240 1 A G scaffold223 Both SNP 0007.scaffold00024 871248 1 T A scaffold223 Both SNP 0007.scaffold00024 871264 1 A T scaffold223 Both SNP 0007.scaffold00024 871282 1 G A scaffold223 ReadM INDEL 0007.scaffold00024 871341 1 A . - ReadM SNP 0007.scaffold00024 871419 1 G A - ReadM SNP 0007.scaffold00024 871522 1 C T - ReadM INDEL 0007.scaffold00024 871555 1 A . - ReadM SNP 0007.scaffold00024 871564 1 C G - ReadM SNP 0007.scaffold00024 871802 1 T C - ReadM SNP 0007.scaffold00024 871997 1 C T - ReadM SNP 0007.scaffold00024 872081 1 A T - ReadM SNP 0007.scaffold00024 872092 1 A G - ReadM SNP 0007.scaffold00024 872116 1 A G - ReadM SNP 0007.scaffold00024 872334 1 C T - ReadM SNP 0007.scaffold00024 872601 1 G A - ReadM SNP 0007.scaffold00024 872662 1 C A - ReadM SNP 0007.scaffold00024 872736 1 C T - ReadM SNP 0007.scaffold00024 872809 1 G A - ReadM SNP 0007.scaffold00024 873237 1 C T - ReadM SNP 0007.scaffold00024 873338 1 A G - ReadM SNP 0007.scaffold00024 873437 1 C T - ReadM SNP 0007.scaffold00024 873587 1 T G - ReadM SNP 0007.scaffold00024 873590 1 T C - ReadM SNP 0007.scaffold00024 873655 1 G T - ReadM SNP 0007.scaffold00024 875750 1 T G - ReadM SNP 0007.scaffold00024 875800 1 T C - ReadM SNP 0007.scaffold00024 876013 1 A G - ScafM SNP 0007.scaffold00024 876267 1 A G scaffold5966 ScafM SNP 0007.scaffold00024 876322 1 C T scaffold5966 ScafM SNP 0007.scaffold00024 876422 1 A T scaffold5966 ScafM SNP 0007.scaffold00024 876540 1 A G scaffold5966 ScafM SNP 0007.scaffold00024 876702 1 G A scaffold5966 ScafM SNP 0007.scaffold00024 876867 1 A T scaffold5966 ScafM INDEL 0007.scaffold00024 877115 1 . A scaffold5966 ScafM SNP 0007.scaffold00024 877119 1 T G scaffold5966 ScafM SNP 0007.scaffold00024 877154 1 A T scaffold5966 ScafM INDEL 0007.scaffold00024 877161 1 . T scaffold5966 ScafM SNP 0007.scaffold00024 877178 1 C T scaffold5966 Both SNP 0007.scaffold00024 877385 1 A G scaffold3991 Both SNP 0007.scaffold00024 877410 1 C G scaffold3991 ReadM SNP 0007.scaffold00024 877477 1 G A - ReadM SNP 0007.scaffold00024 877563 1 A G - Both SNP 0007.scaffold00024 877852 1 G T scaffold3991 Both SNP 0007.scaffold00024 877962 1 A T scaffold3991 Both SNP 0007.scaffold00024 878145 1 T C scaffold3991 ReadM SNP 0007.scaffold00024 878757 1 C T - ReadM SNP 0007.scaffold00024 879246 1 G A - ReadM SNP 0007.scaffold00024 879259 1 A C - ReadM SNP 0007.scaffold00024 879327 1 G A - ReadM SNP 0007.scaffold00024 879491 1 T C - ReadM SNP 0007.scaffold00024 879499 1 T C - ScafM SNP 0007.scaffold00024 880345 1 G A scaffold3991 Both SNP 0007.scaffold00024 880370 1 T G scaffold3991 ReadM SNP 0007.scaffold00024 880464 1 T G - Both SNP 0007.scaffold00024 880532 1 A G scaffold15940 ScafM SNP 0007.scaffold00024 880563 1 T C scaffold15940 ReadM SNP 0007.scaffold00024 880763 1 A G - ReadM SNP 0007.scaffold00024 880822 1 C T - ReadM SNP 0007.scaffold00024 880838 1 T C - ReadM SNP 0007.scaffold00024 881078 1 T G - ReadM SNP 0007.scaffold00024 881129 1 G T - ReadM SNP 0007.scaffold00024 881169 1 G A - Both SNP 0007.scaffold00024 881219 1 T C scaffold3991 Both SNP 0007.scaffold00024 881287 1 C A scaffold3991 Both SNP 0007.scaffold00024 881362 1 A T scaffold3991 ReadM SNP 0007.scaffold00024 881501 1 A G - ReadM SNP 0007.scaffold00024 881554 1 T C - ReadM SNP 0007.scaffold00024 881588 1 C G - ReadM SNP 0007.scaffold00024 882100 1 C T - ReadM SNP 0007.scaffold00024 882596 1 A T - ReadM INDEL 0007.scaffold00024 882667 1 T . - ReadM INDEL 0007.scaffold00024 882779 1 . T - ReadM SNP 0007.scaffold00024 882804 1 G A - ReadM SNP 0007.scaffold00024 883008 1 C T - ReadM SNP 0007.scaffold00024 883049 1 A G - ReadM SNP 0007.scaffold00024 883088 1 T A - ReadM SNP 0007.scaffold00024 883222 1 A G - ReadM INDEL 0007.scaffold00024 883407 1 A . - ScafM INDEL 0007.scaffold00024 884165 2 TT .. scaffold3991 Both INDEL 0007.scaffold00024 884202 2 AT .. scaffold3991 Both SNP 0007.scaffold00024 884236 1 C G scaffold3991 Both INDEL 0007.scaffold00024 884419 1 T . scaffold3991 Both SNP 0007.scaffold00024 884466 1 T G scaffold3991 ScafM SNP 0007.scaffold00024 884613 1 C A scaffold3991 ScafM SNP 0007.scaffold00024 884646 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 884654 1 T G scaffold3991 ScafM INDEL 0007.scaffold00024 884670 9 TGGCCTAGT ......... scaffold3991 ScafM SNP 0007.scaffold00024 884724 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 885279 1 T C scaffold3991 ScafM SNP 0007.scaffold00024 885402 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 885406 1 C T scaffold3991 Both INDEL 0007.scaffold00024 885467 1 . T scaffold3991 ScafM SNP 0007.scaffold00024 885544 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 885549 1 T A scaffold3991 ScafM SNP 0007.scaffold00024 885575 1 G T scaffold3991 ScafM SNP 0007.scaffold00024 885581 1 T G scaffold3991 Both SNP 0007.scaffold00024 885599 1 G A scaffold3991 ScafM INDEL 0007.scaffold00024 885765 5 ATATC ..... scaffold3991 ScafM INDEL 0007.scaffold00024 885831 6 TTTTTT .....C scaffold3991 ScafM SNP 0007.scaffold00024 885860 1 G T scaffold3991 ScafM INDEL 0007.scaffold00024 885863 1 . A scaffold3991 ScafM SNP 0007.scaffold00024 885866 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 885918 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 885922 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 885926 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 885940 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 885952 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 885971 1 C A scaffold3991 ScafM SNP 0007.scaffold00024 885973 1 T C scaffold3991 ScafM SNP 0007.scaffold00024 885979 1 T C scaffold3991 ScafM INDEL 0007.scaffold00024 886020 5 ..... TCAAT scaffold3991 ScafM SNP 0007.scaffold00024 886023 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 886086 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 886089 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 886091 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 886094 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 886158 1 C A scaffold3991 ScafM SNP 0007.scaffold00024 886165 1 T A scaffold3991 ScafM SNP 0007.scaffold00024 886169 1 G C scaffold3991 ScafM SNP 0007.scaffold00024 886204 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 886207 1 C T scaffold3991 ScafM INDEL 0007.scaffold00024 886208 2 .. GC scaffold3991 ScafM INDEL 0007.scaffold00024 886209 1 . T scaffold3991 ScafM INDEL 0007.scaffold00024 886210 4 .... TTGT scaffold3991 ScafM SNP 0007.scaffold00024 886230 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 886235 1 C G scaffold3991 ScafM SNP 0007.scaffold00024 886251 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 886261 2 TG CA scaffold3991 ScafM SNP 0007.scaffold00024 886273 1 C A scaffold3991 ScafM INDEL 0007.scaffold00024 886289 1 C . scaffold3991 ScafM SNP 0007.scaffold00024 886297 1 C A scaffold3991 ScafM SNP 0007.scaffold00024 886299 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 886304 1 A G scaffold3991 Both INDEL 0007.scaffold00024 886372 1 T . scaffold3991 Both SNP 0007.scaffold00024 886383 1 T G scaffold3991 Both SNP 0007.scaffold00024 886386 1 A T scaffold3991 Both SNP 0007.scaffold00024 886481 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 886493 1 C G scaffold3991 ScafM SNP 0007.scaffold00024 886501 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 886528 2 TT CA scaffold3991 ScafM SNP 0007.scaffold00024 886533 1 T G scaffold3991 ScafM SNP 0007.scaffold00024 886557 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 886603 1 G T scaffold3991 ScafM INDEL 0007.scaffold00024 886626 1 . C scaffold3991 ScafM INDEL 0007.scaffold00024 886629 4 .... GTGC scaffold3991 Both SNP 0007.scaffold00024 886683 1 A G scaffold3991 Both SNP 0007.scaffold00024 886785 1 T G scaffold3991 Both SNP 0007.scaffold00024 886791 1 T C scaffold3991 Both SNP 0007.scaffold00024 886948 1 C A scaffold3991 Both SNP 0007.scaffold00024 886995 1 T A scaffold3991 Both SNP 0007.scaffold00024 887005 1 G C scaffold3991 Both SNP 0007.scaffold00024 887260 1 T A scaffold3991 Both SNP 0007.scaffold00024 887321 1 T C scaffold3991 ScafM SNP 0007.scaffold00024 887331 1 C A scaffold3991 Both SNP 0007.scaffold00024 887607 1 G A scaffold3991 Both SNP 0007.scaffold00024 887704 1 G C scaffold3991 Both SNP 0007.scaffold00024 887789 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 887801 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 887811 2 GG CT scaffold3991 Both SNP 0007.scaffold00024 887842 1 T G scaffold3991 ScafM INDEL 0007.scaffold00024 887909 1 . A scaffold3991 Both INDEL 0007.scaffold00024 887930 2 CT .. scaffold3991 Both INDEL 0007.scaffold00024 888066 1 . T scaffold3991 ScafM SNP 0007.scaffold00024 888070 1 C T scaffold3991 Both SNP 0007.scaffold00024 888143 1 A C scaffold3991 Both SNP 0007.scaffold00024 888147 1 T A scaffold3991 Both SNP 0007.scaffold00024 888170 1 A G scaffold3991 Both SNP 0007.scaffold00024 888201 1 C G scaffold3991 Both SNP 0007.scaffold00024 888219 1 T C scaffold3991 ScafM SNP 0007.scaffold00024 888280 1 T C scaffold3991 ScafM SNP 0007.scaffold00024 888302 1 T A scaffold3991 ScafM SNP 0007.scaffold00024 888306 1 A G scaffold3991 ScafM SNP 0007.scaffold00024 888312 1 C T scaffold3991 ScafM INDEL 0007.scaffold00024 888350 5 ..... AAAAA scaffold3991 ScafM SNP 0007.scaffold00024 888352 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 888355 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 888368 1 C T scaffold3991 ScafM SNP 0007.scaffold00024 888379 1 A C scaffold3991 ScafM SNP 0007.scaffold00024 888390 2 TA GT scaffold3991 ScafM SNP 0007.scaffold00024 888397 1 C T scaffold3991 Both SNP 0007.scaffold00024 888427 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 888446 1 T G scaffold3991 Both SNP 0007.scaffold00024 888451 1 A G scaffold3991 Both SNP 0007.scaffold00024 888537 1 C G scaffold3991 Both SNP 0007.scaffold00024 888583 1 G T scaffold3991 Both INDEL 0007.scaffold00024 888611 1 . A scaffold3991 Both SNP 0007.scaffold00024 888636 1 C T scaffold3991 Both SNP 0007.scaffold00024 888707 1 C A scaffold3991 Both SNP 0007.scaffold00024 888727 1 G A scaffold3991 Both SNP 0007.scaffold00024 888756 1 T C scaffold3991 Both INDEL 0007.scaffold00024 888757 1 . A scaffold3991 Both SNP 0007.scaffold00024 888819 1 C T scaffold3991 Both SNP 0007.scaffold00024 889007 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 889151 3 GGA AAG scaffold3991 Both SNP 0007.scaffold00024 889301 1 T C scaffold3991 Both SNP 0007.scaffold00024 889330 1 G A scaffold3991 Both SNP 0007.scaffold00024 889450 1 T A scaffold3991 Both SNP 0007.scaffold00024 889553 1 A T scaffold3991 Both SNP 0007.scaffold00024 889638 1 T G scaffold3991 Both SNP 0007.scaffold00024 890020 1 C T scaffold3991 Both SNP 0007.scaffold00024 890151 1 A G scaffold3991 Both SNP 0007.scaffold00024 891073 1 G C scaffold3991 ScafM INDEL 0007.scaffold00024 892034 27 ........................... AAAAAAAAAAAAAAAAAAAAAAAAAAA scaffold3991 Both INDEL 0007.scaffold00024 892145 1 T . scaffold3991 Both INDEL 0007.scaffold00024 892230 1 G . scaffold3991 Both SNP 0007.scaffold00024 892340 1 T C scaffold3991 Both INDEL 0007.scaffold00024 892421 1 . C scaffold3991 ScafM INDEL 0007.scaffold00024 893014 3 TTT ... scaffold3991 Both SNP 0007.scaffold00024 893025 1 G T scaffold3991 Both SNP 0007.scaffold00024 893043 1 G A scaffold3991 ScafM SNP 0007.scaffold00024 893150 1 A C scaffold3991 ScafM INDEL 0007.scaffold00024 893181 3 ... GCC scaffold3991 ScafM INDEL 0007.scaffold00024 893466 2 .. CT scaffold3991 ReadM INDEL 0007.scaffold00024 893474 2 .. CT - Both SNP 0007.scaffold00024 893537 1 T C scaffold3991 Both SNP 0007.scaffold00024 893583 1 G A scaffold3991 ReadM INDEL 0007.scaffold00024 893623 1 A . - ReadM SNP 0007.scaffold00024 893685 1 C T - ScafM INDEL 0007.scaffold00024 894070 1 A . scaffold3991 ScafM INDEL 0007.scaffold00024 894109 1 . A scaffold3991 Both SNP 0007.scaffold00024 895843 1 C G scaffold3991 ScafM INDEL 0007.scaffold00024 895967 1 . A scaffold3991 ScafM INDEL 0007.scaffold00024 895985 4 .ATT TGCA scaffold3991 ScafM SNP 0007.scaffold00024 895991 2 TT AC scaffold3991 ScafM SNP 0007.scaffold00024 895995 5 TTTTT AAAAG scaffold3991 ScafM SNP 0007.scaffold00024 896002 1 C A scaffold3991 Both SNP 0007.scaffold00024 896125 1 A G scaffold3991 Both SNP 0007.scaffold00024 896131 1 A G scaffold3991 Both SNP 0007.scaffold00024 896142 1 C A scaffold3991 ReadM SNP 0007.scaffold00024 896332 1 C T - ReadM SNP 0007.scaffold00024 896538 1 C T - Both INDEL 0007.scaffold00024 897220 1 C . scaffold3991 Both SNP 0007.scaffold00024 897262 1 A T scaffold3991 Both SNP 0007.scaffold00024 897306 1 C T scaffold3991 Both INDEL 0007.scaffold00024 897624 1 . C scaffold3991 ScafM SNP 0007.scaffold00024 897881 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 897884 1 A G scaffold3991 Both SNP 0007.scaffold00024 898284 1 C T scaffold3991 ReadM INDEL 0007.scaffold00024 898960 1 A . - ScafM INDEL 0007.scaffold00024 899055 6 ...... AACAAC scaffold3991 ReadM SNP 0007.scaffold00024 900796 1 T A - ReadM SNP 0007.scaffold00024 901068 1 C T - ReadM SNP 0007.scaffold00024 901843 1 C A - ReadM SNP 0007.scaffold00024 902766 1 A T - ReadM SNP 0007.scaffold00024 904548 2 CA TG - ReadM SNP 0007.scaffold00024 905765 1 C T - ReadM SNP 0007.scaffold00024 906996 1 C T - ReadM INDEL 0007.scaffold00024 918912 1 . G - ReadM SNP 0007.scaffold00024 919031 1 G A - ReadM SNP 0007.scaffold00024 919585 1 T A - ReadM SNP 0007.scaffold00024 920623 2 AA GG - ReadM SNP 0007.scaffold00024 920695 1 T C - ReadM SNP 0007.scaffold00024 920739 1 A G - ReadM SNP 0007.scaffold00024 920786 1 A T - ReadM SNP 0007.scaffold00024 920990 1 A G - Both INDEL 0007.scaffold00024 921066 1 . A scaffold3991 Both SNP 0007.scaffold00024 921082 1 T C scaffold3991 Both SNP 0007.scaffold00024 921122 1 T A scaffold3991 Both SNP 0007.scaffold00024 921334 1 C T scaffold3991 Both SNP 0007.scaffold00024 921638 1 A T scaffold3991 Both SNP 0007.scaffold00024 921904 1 C G scaffold3991 ReadM SNP 0007.scaffold00024 922404 1 T C - ReadM SNP 0007.scaffold00024 922647 1 A G - Both SNP 0007.scaffold00024 922849 1 G T scaffold3991 Both SNP 0007.scaffold00024 922938 1 G A scaffold3991 Both SNP 0007.scaffold00024 923017 1 G T scaffold3991 Both SNP 0007.scaffold00024 923509 1 A C scaffold3991 ReadM SNP 0007.scaffold00024 923619 1 T C - ReadM SNP 0007.scaffold00024 924099 1 T C - ReadM INDEL 0007.scaffold00024 924365 3 ... TTG - Both SNP 0007.scaffold00024 924631 1 G A scaffold3991 Both SNP 0007.scaffold00024 925002 1 C A scaffold3991 ReadM SNP 0007.scaffold00024 925507 1 G T - ReadM SNP 0007.scaffold00024 925779 1 A G - ReadM SNP 0007.scaffold00024 926016 1 C T - ReadM SNP 0007.scaffold00024 926056 1 T C - ReadM SNP 0007.scaffold00024 926268 1 G A - ReadM SNP 0007.scaffold00024 926948 1 A G - Both SNP 0007.scaffold00024 927707 1 G A scaffold3991 ReadM SNP 0007.scaffold00024 928111 1 G A - ReadM SNP 0007.scaffold00024 928197 1 C T - ReadM SNP 0007.scaffold00024 928226 1 C G - ReadM SNP 0007.scaffold00024 928365 1 G A - ReadM SNP 0007.scaffold00024 928430 1 T C - Both SNP 0007.scaffold00024 928628 1 G A scaffold3991 Both SNP 0007.scaffold00024 928645 1 T A scaffold3991 Both SNP 0007.scaffold00024 928650 1 C G scaffold3991 ReadM SNP 0007.scaffold00024 928985 1 A G - ReadM SNP 0007.scaffold00024 928994 1 A G - Both SNP 0007.scaffold00024 930518 1 C T scaffold3991 Both SNP 0007.scaffold00024 930790 1 A T scaffold3991 Both SNP 0007.scaffold00024 931198 1 C T scaffold3991 Both SNP 0007.scaffold00024 931351 1 T C scaffold3991 Both INDEL 0007.scaffold00024 931440 1 . C scaffold3991 Both SNP 0007.scaffold00024 931510 1 G C scaffold3991 Both INDEL 0007.scaffold00024 931525 2 .. CA scaffold3991 Both SNP 0007.scaffold00024 931642 1 A C scaffold3991 Both SNP 0007.scaffold00024 931768 1 G T scaffold3991 ScafM INDEL 0007.scaffold00024 932192 1 . T scaffold3991 ScafM SNP 0007.scaffold00024 932194 1 A T scaffold3991 ScafM SNP 0007.scaffold00024 932196 1 T G scaffold3991 ScafM INDEL 0007.scaffold00024 932198 2 .C TA scaffold3991 Both SNP 0007.scaffold00024 932842 1 T C scaffold3991 Both SNP 0007.scaffold00024 933019 1 T G scaffold3991 Both SNP 0007.scaffold00024 933110 1 A T scaffold3991 Both SNP 0007.scaffold00024 933136 1 T G scaffold3991 Both SNP 0007.scaffold00024 933493 1 G T scaffold3991 Both SNP 0007.scaffold00024 934076 1 A G scaffold3991 Both INDEL 0007.scaffold00024 936876 1 . T scaffold3991 Both INDEL 0007.scaffold00024 937374 2 .. CT scaffold3991 Both SNP 0007.scaffold00024 937599 1 A G scaffold3991 Both SNP 0007.scaffold00024 937770 1 T A scaffold3991 Both SNP 0007.scaffold00024 937772 1 T C scaffold3991 ReadM SNP 0007.scaffold00024 937827 1 G T - Both SNP 0007.scaffold00024 940028 1 C G scaffold3991 Both SNP 0007.scaffold00024 940284 1 A G scaffold3991 Both SNP 0007.scaffold00024 940425 1 G T scaffold3991 Both SNP 0007.scaffold00024 940523 1 T C scaffold3991 Both SNP 0007.scaffold00024 941208 1 T G scaffold3991 ScafM INDEL 0007.scaffold00024 941916 15 ............... GGGGGGGGGGGGGGG scaffold3991 ScafM INDEL 0007.scaffold00024 943502 1 . A scaffold3991 Both SNP 0007.scaffold00024 944250 1 C T scaffold3991 Both SNP 0007.scaffold00024 944595 1 T A scaffold3991 ReadM SNP 0007.scaffold00024 947191 1 C T - ReadM SNP 0007.scaffold00024 947300 1 C T - ReadM SNP 0007.scaffold00024 947697 1 C T - ReadM SNP 0007.scaffold00024 947767 1 C T - ScafM SNP 0007.scaffold00024 948439 1 T C scaffold3991 ReadM SNP 0007.scaffold00024 949278 1 G T - Both INDEL 0007.scaffold00024 949999 1 . A scaffold3991 Both SNP 0007.scaffold00024 950325 2 TT CC scaffold3991 Both SNP 0007.scaffold00024 950471 1 A C scaffold3991 Both SNP 0007.scaffold00024 950576 1 A G scaffold3991 ReadM SNP 0007.scaffold00024 950785 1 C T - ReadM SNP 0007.scaffold00024 952056 1 A G - ScafM SNP 0007.scaffold00024 953194 1 G A scaffold695 Both SNP 0007.scaffold00024 955378 1 G A scaffold3991 ReadM INDEL 0007.scaffold00024 955529 1 . G - ReadM SNP 0007.scaffold00024 955602 1 C A - ReadM SNP 0007.scaffold00024 955795 1 C T - ReadM SNP 0007.scaffold00024 958989 1 A G - ReadM SNP 0007.scaffold00024 959275 1 C A - ReadM SNP 0007.scaffold00024 959309 1 T G - ReadM SNP 0007.scaffold00024 959318 1 G A - ReadM SNP 0007.scaffold00024 959734 1 T A - ReadM SNP 0007.scaffold00024 959740 1 G A - ReadM SNP 0007.scaffold00024 959996 1 C A - ReadM SNP 0007.scaffold00024 960155 1 T C - ReadM SNP 0007.scaffold00024 960398 1 A G - ReadM SNP 0007.scaffold00024 960503 1 C A - ReadM SNP 0007.scaffold00024 960719 1 C T - ReadM INDEL 0007.scaffold00024 960830 1 T . - ReadM SNP 0007.scaffold00024 960941 1 G C - ReadM INDEL 0007.scaffold00024 961034 1 . T - ReadM SNP 0007.scaffold00024 961403 1 G A - ReadM SNP 0007.scaffold00024 962733 1 T C - ReadM SNP 0007.scaffold00024 963026 1 T C - ReadM SNP 0007.scaffold00024 963423 1 A G - ReadM SNP 0007.scaffold00024 963537 1 A T - ReadM SNP 0007.scaffold00024 964316 1 G A - ReadM SNP 0007.scaffold00024 964471 1 G A - ReadM SNP 0007.scaffold00024 965013 1 A T - ReadM SNP 0007.scaffold00024 965784 1 C T - ReadM SNP 0007.scaffold00024 965845 1 T C - ReadM SNP 0007.scaffold00024 966328 1 T C - ReadM SNP 0007.scaffold00024 966384 1 A T - ReadM SNP 0007.scaffold00024 966387 1 C T - ReadM SNP 0007.scaffold00024 966765 1 A G - ReadM SNP 0007.scaffold00024 966786 1 C T - ReadM SNP 0007.scaffold00024 966907 1 C G - ReadM SNP 0007.scaffold00024 966920 1 G A - ReadM SNP 0007.scaffold00024 967056 1 G A - ReadM SNP 0007.scaffold00024 967480 1 T C - ReadM SNP 0007.scaffold00024 967659 1 T C - ReadM SNP 0007.scaffold00024 967741 1 T A - ReadM SNP 0007.scaffold00024 968183 1 G A - ReadM SNP 0007.scaffold00024 968806 1 G A - ReadM INDEL 0007.scaffold00024 969115 2 AA .. - ReadM SNP 0007.scaffold00024 969527 1 A T - ReadM SNP 0007.scaffold00024 970062 1 C A - ReadM INDEL 0007.scaffold00024 970514 1 A . - ReadM SNP 0007.scaffold00024 970853 1 C A - ReadM SNP 0007.scaffold00024 971187 1 A G - Both SNP 0007.scaffold00024 971426 1 G C scaffold695 ReadM SNP 0007.scaffold00024 971745 1 T A - ReadM SNP 0007.scaffold00024 972326 1 G A - ReadM SNP 0007.scaffold00024 972791 1 A G - ReadM SNP 0007.scaffold00024 972834 1 T G - ScafM INDEL 0007.scaffold00024 972941 14 AAAGAAATTCAGCT .............. scaffold695 ReadM INDEL 0007.scaffold00024 975264 1 A . - ReadM SNP 0007.scaffold00024 976117 1 C T - ReadM SNP 0007.scaffold00024 976316 1 T G - ReadM SNP 0007.scaffold00024 976564 1 C G - ReadM SNP 0007.scaffold00024 977028 1 C A - ReadM SNP 0007.scaffold00024 977157 2 CC TT - ReadM SNP 0007.scaffold00024 977425 1 A T - ReadM SNP 0007.scaffold00024 977490 1 G A - ReadM SNP 0007.scaffold00024 977737 1 G C - ReadM SNP 0007.scaffold00024 977863 1 A G - ReadM SNP 0007.scaffold00024 978098 1 A C - ReadM SNP 0007.scaffold00024 978227 1 G C - ReadM SNP 0007.scaffold00024 978254 1 T G - ReadM SNP 0007.scaffold00024 978462 1 A G - ReadM SNP 0007.scaffold00024 980403 1 A G - ScafM INDEL 0007.scaffold00024 981063 1 . A scaffold695 ScafM SNP 0007.scaffold00024 981285 1 G C scaffold695 Both SNP 0007.scaffold00024 981431 1 C T scaffold695 ReadM INDEL 0007.scaffold00024 982098 1 T . - ScafM INDEL 0007.scaffold00024 982098 2 TT .C scaffold695 ReadM SNP 0007.scaffold00024 982227 1 C T - Both SNP 0007.scaffold00024 982728 1 G A scaffold695 Both SNP 0007.scaffold00024 982795 1 T A scaffold695 ScafM SNP 0007.scaffold00024 984241 1 C A scaffold695 ScafM INDEL 0007.scaffold00024 984371 1 A . scaffold695 ReadM SNP 0007.scaffold00024 985702 1 G A - ReadM SNP 0007.scaffold00024 985778 1 T G - ReadM SNP 0007.scaffold00024 985952 1 G A - ReadM SNP 0007.scaffold00024 987554 1 A G - ReadM SNP 0007.scaffold00024 987836 1 G A - ReadM SNP 0007.scaffold00024 987983 1 A G - ReadM SNP 0007.scaffold00024 988409 1 C G - ReadM SNP 0007.scaffold00024 988501 1 C T - ReadM SNP 0007.scaffold00024 988540 1 T G - ReadM SNP 0007.scaffold00024 989522 1 C T - ReadM SNP 0007.scaffold00024 989534 1 T G - ReadM SNP 0007.scaffold00024 990040 1 G A - ReadM INDEL 0007.scaffold00024 990330 2 .. AA - ReadM SNP 0007.scaffold00024 990356 1 C T - ReadM SNP 0007.scaffold00024 990492 1 G T - ReadM SNP 0007.scaffold00024 990738 1 C T - ReadM SNP 0007.scaffold00024 990807 1 T C - ReadM SNP 0007.scaffold00024 990884 1 G A - ReadM SNP 0007.scaffold00024 991088 1 A G - ReadM SNP 0007.scaffold00024 991201 1 A G - ReadM SNP 0007.scaffold00024 991257 1 G A - ReadM SNP 0007.scaffold00024 992286 1 A G - ReadM INDEL 0007.scaffold00024 992398 1 . T - ReadM SNP 0007.scaffold00024 992572 1 G A - ReadM INDEL 0007.scaffold00024 993412 1 T . - ReadM SNP 0007.scaffold00024 993611 1 A G - ReadM SNP 0007.scaffold00024 993957 1 A G - ReadM SNP 0007.scaffold00024 993961 1 T C - ReadM SNP 0007.scaffold00024 994279 1 A G - ReadM SNP 0007.scaffold00024 994384 1 G C - ReadM SNP 0007.scaffold00024 994468 1 A G - ReadM SNP 0007.scaffold00024 994963 1 T C - ReadM SNP 0007.scaffold00024 995190 1 A T - ReadM SNP 0007.scaffold00024 995312 1 G A - ReadM SNP 0007.scaffold00024 995329 1 C T - ReadM SNP 0007.scaffold00024 995440 1 A T - ReadM INDEL 0007.scaffold00024 995939 1 G . - ReadM SNP 0007.scaffold00024 996244 1 G T - Both SNP 0007.scaffold00024 996335 1 A G scaffold695 ReadM SNP 0007.scaffold00024 996543 1 A G - ReadM SNP 0007.scaffold00024 996637 1 A G - ReadM SNP 0007.scaffold00024 997531 1 C T - ReadM SNP 0007.scaffold00024 997622 1 A C - ReadM SNP 0007.scaffold00024 998345 1 A G - ReadM SNP 0007.scaffold00024 998672 1 T A - ReadM SNP 0007.scaffold00024 998868 1 G T - ReadM SNP 0007.scaffold00024 999842 1 A G - ReadM INDEL 0007.scaffold00024 999923 1 G . - ReadM SNP 0007.scaffold00024 1000115 1 G A - ReadM SNP 0007.scaffold00024 1000455 1 A G - ReadM SNP 0007.scaffold00024 1000527 1 A G - ReadM SNP 0007.scaffold00024 1000784 1 C T - ReadM SNP 0007.scaffold00024 1000817 1 C A - ReadM SNP 0007.scaffold00024 1001062 1 G A - ReadM SNP 0007.scaffold00024 1001119 1 A G - ReadM SNP 0007.scaffold00024 1001189 1 G A - ReadM SNP 0007.scaffold00024 1001394 1 T G - ReadM SNP 0007.scaffold00024 1001630 1 G A - ReadM SNP 0007.scaffold00024 1002178 1 A G - ReadM SNP 0007.scaffold00024 1002437 1 C T - ReadM SNP 0007.scaffold00024 1002676 1 T A - ReadM SNP 0007.scaffold00024 1002883 1 T C - ReadM SNP 0007.scaffold00024 1002968 1 C G - ReadM SNP 0007.scaffold00024 1003529 1 G T - ReadM SNP 0007.scaffold00024 1003902 1 C T - ReadM SNP 0007.scaffold00024 1004280 1 G T - ReadM INDEL 0007.scaffold00024 1004893 1 T . - ReadM SNP 0007.scaffold00024 1005079 1 T C - ReadM SNP 0007.scaffold00024 1005205 1 T C - ReadM SNP 0007.scaffold00024 1005497 1 T C - ReadM SNP 0007.scaffold00024 1005734 1 T C - ReadM SNP 0007.scaffold00024 1006399 1 A T - ReadM SNP 0007.scaffold00024 1006614 1 A G - ReadM SNP 0007.scaffold00024 1006639 1 G A - ReadM SNP 0007.scaffold00024 1006725 1 T A - ReadM SNP 0007.scaffold00024 1007077 1 C T - Both SNP 0007.scaffold00024 1007464 1 C A scaffold695 ReadM SNP 0007.scaffold00024 1007823 1 A T - ReadM SNP 0007.scaffold00024 1008012 1 A G - ReadM SNP 0007.scaffold00024 1008082 1 C T - Both INDEL 0007.scaffold00024 1008655 2 TA .. scaffold695 ReadM SNP 0007.scaffold00024 1009187 1 T G - ReadM SNP 0007.scaffold00024 1009691 1 G C - Both SNP 0007.scaffold00024 1010773 1 C A scaffold695 Both SNP 0007.scaffold00024 1010862 1 T C scaffold695 ScafM INDEL 0007.scaffold00024 1011136 1 . T scaffold695 Both INDEL 0007.scaffold00024 1011173 1 T . scaffold695 ScafM SNP 0007.scaffold00024 1011727 1 A T scaffold695 ScafM SNP 0007.scaffold00024 1011737 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1012755 1 T C - Both SNP 0007.scaffold00024 1013099 1 C G scaffold695 Both SNP 0007.scaffold00024 1013108 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1013211 1 A G - ReadM SNP 0007.scaffold00024 1013289 1 C T - ScafM INDEL 0007.scaffold00024 1013741 16 ................ CTCACACACACACACA scaffold695 Both SNP 0007.scaffold00024 1014052 1 C T scaffold695 Both SNP 0007.scaffold00024 1014278 1 C A scaffold695 ReadM SNP 0007.scaffold00024 1014645 1 T A - ReadM SNP 0007.scaffold00024 1014675 1 G T - Both SNP 0007.scaffold00024 1014913 1 T C scaffold695 Both SNP 0007.scaffold00024 1015033 1 G A scaffold695 Both SNP 0007.scaffold00024 1015341 1 A G scaffold695 ScafM INDEL 0007.scaffold00024 1016539 2 .. TT scaffold695 Both SNP 0007.scaffold00024 1017408 1 A C scaffold695 Both SNP 0007.scaffold00024 1017619 1 T A scaffold695 Both SNP 0007.scaffold00024 1020051 1 C T scaffold695 Both SNP 0007.scaffold00024 1020064 1 G A scaffold695 Both SNP 0007.scaffold00024 1020131 1 T A scaffold695 ScafM SNP 0007.scaffold00024 1020726 1 A T scaffold695 ScafM INDEL 0007.scaffold00024 1020730 4 .... TTAT scaffold695 Both INDEL 0007.scaffold00024 1021110 1 A . scaffold695 ReadM SNP 0007.scaffold00024 1021550 1 A G - ReadM INDEL 0007.scaffold00024 1021711 1 . G - ScafM SNP 0007.scaffold00024 1023182 1 T G scaffold695 Both SNP 0007.scaffold00024 1023315 1 A C scaffold695 Both SNP 0007.scaffold00024 1023502 1 C T scaffold695 ScafM INDEL 0007.scaffold00024 1024299 2 .. TT scaffold695 Both SNP 0007.scaffold00024 1024813 1 C A scaffold695 Both SNP 0007.scaffold00024 1025126 1 T A scaffold695 Both SNP 0007.scaffold00024 1025304 1 T C scaffold695 Both SNP 0007.scaffold00024 1025839 1 G T scaffold695 Both SNP 0007.scaffold00024 1026251 1 A T scaffold695 Both SNP 0007.scaffold00024 1026317 1 C T scaffold695 Both SNP 0007.scaffold00024 1026869 1 A G scaffold695 Both SNP 0007.scaffold00024 1026947 1 A C scaffold695 ScafM SNP 0007.scaffold00024 1028378 1 G T scaffold695 Both SNP 0007.scaffold00024 1028650 1 G A scaffold695 Both SNP 0007.scaffold00024 1029472 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1030237 1 C A - ReadM INDEL 0007.scaffold00024 1030378 2 .. GA - Both SNP 0007.scaffold00024 1030413 1 T G scaffold695 Both SNP 0007.scaffold00024 1030837 1 T C scaffold695 Both SNP 0007.scaffold00024 1031555 1 A G scaffold695 Both SNP 0007.scaffold00024 1031838 1 C G scaffold695 Both SNP 0007.scaffold00024 1032811 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1033390 1 T A - ReadM INDEL 0007.scaffold00024 1033748 2 .. AA - Both SNP 0007.scaffold00024 1034710 1 C T scaffold695 Both SNP 0007.scaffold00024 1034995 1 T C scaffold695 Both INDEL 0007.scaffold00024 1035095 1 . T scaffold695 ReadM SNP 0007.scaffold00024 1035401 1 G C - ScafM SNP 0007.scaffold00024 1035475 1 A G scaffold14316 ScafM SNP 0007.scaffold00024 1035481 1 G A scaffold14316 ScafM SNP 0007.scaffold00024 1035485 1 A T scaffold14316 ScafM SNP 0007.scaffold00024 1035493 1 C T scaffold14316 ScafM SNP 0007.scaffold00024 1035518 1 A C scaffold14316 ScafM INDEL 0007.scaffold00024 1035525 4 CTTA .... scaffold14316 ScafM SNP 0007.scaffold00024 1035545 1 T C scaffold14316 ScafM SNP 0007.scaffold00024 1035577 1 C G scaffold14316 ScafM SNP 0007.scaffold00024 1035597 2 AC TT scaffold14316 ScafM SNP 0007.scaffold00024 1035603 1 G A scaffold14316 ScafM SNP 0007.scaffold00024 1035649 1 A T scaffold14316 ScafM SNP 0007.scaffold00024 1035655 1 C G scaffold14316 ReadM INDEL 0007.scaffold00024 1035656 1 A . - ScafM SNP 0007.scaffold00024 1035680 1 T A scaffold14316 ScafM SNP 0007.scaffold00024 1035695 1 T C scaffold14316 ScafM SNP 0007.scaffold00024 1035764 1 G A scaffold14316 ScafM SNP 0007.scaffold00024 1035767 1 G A scaffold14316 ScafM SNP 0007.scaffold00024 1035782 1 G A scaffold14316 ScafM SNP 0007.scaffold00024 1035785 1 A G scaffold14316 ScafM SNP 0007.scaffold00024 1035787 1 C T scaffold14316 ScafM SNP 0007.scaffold00024 1035797 1 C A scaffold14316 ScafM SNP 0007.scaffold00024 1035840 1 A C scaffold14316 ScafM SNP 0007.scaffold00024 1035854 1 G T scaffold14316 ScafM SNP 0007.scaffold00024 1035866 1 T C scaffold14316 ScafM SNP 0007.scaffold00024 1035893 1 T C scaffold14316 ScafM SNP 0007.scaffold00024 1035935 1 C T scaffold14316 ScafM SNP 0007.scaffold00024 1035939 1 A G scaffold14316 ScafM SNP 0007.scaffold00024 1035949 1 T A scaffold14316 ScafM SNP 0007.scaffold00024 1035963 1 T C scaffold14316 ScafM SNP 0007.scaffold00024 1035984 1 G T scaffold14316 ScafM SNP 0007.scaffold00024 1035998 1 C T scaffold14316 Both SNP 0007.scaffold00024 1036828 1 C T scaffold695 Both SNP 0007.scaffold00024 1036936 1 G A scaffold695 Both SNP 0007.scaffold00024 1036959 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1037079 1 A C - Both SNP 0007.scaffold00024 1037855 1 T A scaffold695 ReadM SNP 0007.scaffold00024 1038054 1 A T - Both SNP 0007.scaffold00024 1038558 1 A C scaffold695 Both SNP 0007.scaffold00024 1040054 1 T A scaffold695 Both INDEL 0007.scaffold00024 1040209 1 C . scaffold695 Both SNP 0007.scaffold00024 1040236 1 A C scaffold695 Both SNP 0007.scaffold00024 1040254 1 G A scaffold695 Both SNP 0007.scaffold00024 1040587 1 T A scaffold695 ReadM SNP 0007.scaffold00024 1040927 1 T C - ReadM SNP 0007.scaffold00024 1040934 1 G A - ReadM SNP 0007.scaffold00024 1040993 1 A G - ReadM SNP 0007.scaffold00024 1041144 1 T C - ReadM SNP 0007.scaffold00024 1041764 1 C A - ReadM SNP 0007.scaffold00024 1041787 1 T A - ReadM SNP 0007.scaffold00024 1041974 1 T C - ReadM SNP 0007.scaffold00024 1042051 1 T C - ReadM SNP 0007.scaffold00024 1042507 1 G A - ReadM SNP 0007.scaffold00024 1042683 1 A C - ReadM SNP 0007.scaffold00024 1043177 1 G C - ScafM INDEL 0007.scaffold00024 1043398 11 ........... TTGGGTGTTGG scaffold695 ScafM SNP 0007.scaffold00024 1043431 1 C T scaffold695 ScafM INDEL 0007.scaffold00024 1043440 3 ... TTT scaffold695 Both SNP 0007.scaffold00024 1043476 1 A T scaffold695 Both SNP 0007.scaffold00024 1043496 1 A G scaffold695 Both SNP 0007.scaffold00024 1043565 1 A G scaffold695 Both SNP 0007.scaffold00024 1043885 1 C A scaffold695 Both INDEL 0007.scaffold00024 1043895 1 . T scaffold695 ScafM SNP 0007.scaffold00024 1044035 1 G A scaffold695 ScafM SNP 0007.scaffold00024 1044358 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1044520 1 A T - ReadM SNP 0007.scaffold00024 1044654 1 G A - ReadM SNP 0007.scaffold00024 1044956 1 A C - ReadM SNP 0007.scaffold00024 1045090 1 G A - ReadM INDEL 0007.scaffold00024 1045415 3 GGG ... - ReadM SNP 0007.scaffold00024 1045565 1 C T - ReadM INDEL 0007.scaffold00024 1045575 1 . T - ReadM SNP 0007.scaffold00024 1045706 1 C G - ReadM SNP 0007.scaffold00024 1045804 1 T C - ReadM SNP 0007.scaffold00024 1046127 1 T C - ReadM SNP 0007.scaffold00024 1046149 1 T C - ReadM SNP 0007.scaffold00024 1046394 1 T C - ReadM SNP 0007.scaffold00024 1046425 1 C A - ReadM SNP 0007.scaffold00024 1046475 1 A G - Both INDEL 0007.scaffold00024 1046839 1 . A scaffold695 ScafM INDEL 0007.scaffold00024 1047108 1 . T scaffold695 Both SNP 0007.scaffold00024 1047359 1 C A scaffold695 ScafM SNP 0007.scaffold00024 1048034 1 A T scaffold695 Both SNP 0007.scaffold00024 1049086 1 C T scaffold695 ReadM SNP 0007.scaffold00024 1049491 1 A C - ReadM SNP 0007.scaffold00024 1050426 1 C A - ReadM SNP 0007.scaffold00024 1050808 1 A G - ReadM SNP 0007.scaffold00024 1051030 1 G A - ReadM SNP 0007.scaffold00024 1051095 1 A G - ReadM SNP 0007.scaffold00024 1051463 1 G A - ReadM SNP 0007.scaffold00024 1051514 1 A G - ReadM SNP 0007.scaffold00024 1051631 1 T C - ReadM SNP 0007.scaffold00024 1051832 1 A T - ReadM SNP 0007.scaffold00024 1051984 1 T G - ReadM INDEL 0007.scaffold00024 1052412 1 . C - ReadM SNP 0007.scaffold00024 1052421 1 A G - ReadM SNP 0007.scaffold00024 1052437 1 G C - ReadM SNP 0007.scaffold00024 1052518 1 T C - ReadM SNP 0007.scaffold00024 1052746 1 C T - ReadM SNP 0007.scaffold00024 1053540 1 C T - ReadM SNP 0007.scaffold00024 1053704 1 T G - ReadM SNP 0007.scaffold00024 1054423 1 A C - Both SNP 0007.scaffold00024 1055141 1 C T scaffold695 Both SNP 0007.scaffold00024 1055421 1 A G scaffold695 Both INDEL 0007.scaffold00024 1055958 2 .. AG scaffold695 ReadM INDEL 0007.scaffold00024 1055960 2 .. 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AATT scaffold6108 ScafM INDEL 0007.scaffold00024 1129560 26 .......................... 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T scaffold7547 ScafM INDEL 0007.scaffold00024 1183148 1 . T scaffold7547 ScafM SNP 0007.scaffold00024 1183200 1 A G scaffold7547 Both SNP 0007.scaffold00024 1189862 1 G A scaffold7547 ScafM INDEL 0007.scaffold00024 1190363 21 ..................... AAAATTCTAATGGTGGACAAG scaffold7547 ScafM INDEL 0007.scaffold00024 1190364 1 . T scaffold7547 Both SNP 0007.scaffold00024 1190818 1 G T scaffold7547 ReadM SNP 0007.scaffold00024 1192347 1 A C - ReadM SNP 0007.scaffold00024 1192355 1 A G - ReadM SNP 0007.scaffold00024 1192463 1 A G - ReadM SNP 0007.scaffold00024 1192507 1 G A - ReadM SNP 0007.scaffold00024 1192548 1 G T - ReadM SNP 0007.scaffold00024 1193293 1 A G - ReadM SNP 0007.scaffold00024 1193493 1 G A - ReadM SNP 0007.scaffold00024 1193530 1 A G - ReadM SNP 0007.scaffold00024 1193589 1 C T - ReadM SNP 0007.scaffold00024 1193810 1 A G - ReadM SNP 0007.scaffold00024 1193880 1 C T - ReadM INDEL 0007.scaffold00024 1194032 1 A . - ReadM SNP 0007.scaffold00024 1194169 1 A G - ReadM SNP 0007.scaffold00024 1194484 1 G T - ReadM SNP 0007.scaffold00024 1194592 1 T A - ReadM SNP 0007.scaffold00024 1194907 1 A G - ReadM SNP 0007.scaffold00024 1195156 1 T C - ReadM SNP 0007.scaffold00024 1195541 1 G A - ReadM SNP 0007.scaffold00024 1195576 1 G A - ReadM SNP 0007.scaffold00024 1195622 1 T A - ReadM SNP 0007.scaffold00024 1195988 1 A G - ReadM SNP 0007.scaffold00024 1196059 1 A G - Both SNP 0007.scaffold00024 1196567 1 T G scaffold7547 ScafM SNP 0007.scaffold00024 1197026 2 AC TT scaffold7547 ScafM SNP 0007.scaffold00024 1197047 1 G A scaffold7547 ScafM SNP 0007.scaffold00024 1197050 1 T C scaffold7547 Both SNP 0007.scaffold00024 1197096 1 G A scaffold7547 Both SNP 0007.scaffold00024 1197287 1 A G scaffold7547 Both SNP 0007.scaffold00024 1197478 1 T C scaffold7547 Both SNP 0007.scaffold00024 1197674 1 G A scaffold7547 ScafM SNP 0007.scaffold00024 1197688 1 T C scaffold7547 ScafM SNP 0007.scaffold00024 1198070 1 C T scaffold7547 ScafM SNP 0007.scaffold00024 1198329 1 A G scaffold7547 ScafM SNP 0007.scaffold00024 1198428 1 T G scaffold7547 ScafM SNP 0007.scaffold00024 1198496 1 A G scaffold7547 ScafM SNP 0007.scaffold00024 1198508 1 A G scaffold7547 ScafM SNP 0007.scaffold00024 1198514 1 C T scaffold7547 ScafM SNP 0007.scaffold00024 1198575 1 C A scaffold7547 ScafM INDEL 0007.scaffold00024 1198628 2 .. AT scaffold7547 Both SNP 0007.scaffold00024 1199023 1 T C scaffold7547 Both SNP 0007.scaffold00024 1199208 1 C T scaffold7547 Both SNP 0007.scaffold00024 1199279 1 C A scaffold7547 Both SNP 0007.scaffold00024 1199342 1 A T scaffold7547 ReadM SNP 0007.scaffold00024 1199620 1 G A - ReadM SNP 0007.scaffold00024 1199872 1 C T - ReadM SNP 0007.scaffold00024 1200083 1 A T - ReadM SNP 0007.scaffold00024 1200104 1 C T - ReadM SNP 0007.scaffold00024 1200310 1 T C - Both SNP 0007.scaffold00024 1200431 1 C T scaffold7547 ReadM SNP 0007.scaffold00024 1200484 1 C T - ReadM SNP 0007.scaffold00024 1200767 1 G A - ReadM SNP 0007.scaffold00024 1200930 1 G C - ReadM SNP 0007.scaffold00024 1200962 1 A G - ReadM SNP 0007.scaffold00024 1201323 1 C T - ReadM SNP 0007.scaffold00024 1201380 1 T C - ReadM SNP 0007.scaffold00024 1201739 1 C T - ReadM SNP 0007.scaffold00024 1202112 1 A G - ReadM SNP 0007.scaffold00024 1202220 1 T C - ReadM SNP 0007.scaffold00024 1202353 1 A G - ReadM SNP 0007.scaffold00024 1202460 1 A T - 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ReadM SNP 0007.scaffold00024 1210233 1 G C - Both SNP 0007.scaffold00024 1210301 1 G C scaffold7547 ReadM SNP 0007.scaffold00024 1210351 1 C A - ReadM SNP 0007.scaffold00024 1210383 1 C T - ReadM SNP 0007.scaffold00024 1210483 1 T C - ReadM SNP 0007.scaffold00024 1210556 1 G A - ReadM SNP 0007.scaffold00024 1210673 1 A G - ReadM SNP 0007.scaffold00024 1210833 1 G T - ReadM SNP 0007.scaffold00024 1210885 1 G A - ReadM INDEL 0007.scaffold00024 1211257 1 A . - ReadM SNP 0007.scaffold00024 1211375 1 C T - ReadM SNP 0007.scaffold00024 1211407 1 G A - ReadM SNP 0007.scaffold00024 1211700 1 G T - ReadM INDEL 0007.scaffold00024 1211759 3 TAT ... - ReadM SNP 0007.scaffold00024 1211906 1 A T - ReadM SNP 0007.scaffold00024 1212082 1 G A - ReadM SNP 0007.scaffold00024 1212248 1 C T - ReadM SNP 0007.scaffold00024 1212281 1 T C - ReadM SNP 0007.scaffold00024 1212459 1 G T - ReadM SNP 0007.scaffold00024 1212505 1 G T - ReadM SNP 0007.scaffold00024 1212664 1 T C - ReadM SNP 0007.scaffold00024 1212833 1 A C - 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Both SNP 0007.scaffold00024 1215871 1 A G scaffold7547 ReadM SNP 0007.scaffold00024 1216406 1 T C - ReadM SNP 0007.scaffold00024 1216459 1 C G - ReadM SNP 0007.scaffold00024 1218527 1 T A - ReadM SNP 0007.scaffold00024 1218939 1 C T - ReadM SNP 0007.scaffold00024 1219411 1 C T - ReadM SNP 0007.scaffold00024 1219723 1 T C - ReadM SNP 0007.scaffold00024 1220037 1 T G - ReadM SNP 0007.scaffold00024 1220307 1 T C - ReadM SNP 0007.scaffold00024 1220706 1 G A - ReadM SNP 0007.scaffold00024 1220714 1 G C - ReadM SNP 0007.scaffold00024 1221181 1 A T - ReadM SNP 0007.scaffold00024 1221501 1 G A - ReadM INDEL 0007.scaffold00024 1221512 1 A . - ReadM SNP 0007.scaffold00024 1221834 1 A G - ReadM SNP 0007.scaffold00024 1221885 1 T C - ReadM SNP 0007.scaffold00024 1221902 1 G A - ReadM SNP 0007.scaffold00024 1221962 1 T G - ReadM SNP 0007.scaffold00024 1222027 1 G C - ReadM SNP 0007.scaffold00024 1222266 1 T A - ReadM SNP 0007.scaffold00024 1222421 1 G A - ReadM SNP 0007.scaffold00024 1222749 1 A G - 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A - ReadM INDEL 0007.scaffold00024 1235445 1 . G - ScafM SNP 0007.scaffold00024 1235614 1 T A scaffold13294 ScafM INDEL 0007.scaffold00024 1235618 1 . T scaffold13294 ScafM INDEL 0007.scaffold00024 1235620 1 . T scaffold13294 ScafM SNP 0007.scaffold00024 1235645 1 G C scaffold13294 ScafM SNP 0007.scaffold00024 1235653 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1235667 1 G T scaffold13294 ScafM SNP 0007.scaffold00024 1235686 1 T C scaffold13294 ScafM SNP 0007.scaffold00024 1235691 1 C G scaffold13294 ScafM SNP 0007.scaffold00024 1235694 1 C A scaffold13294 ScafM SNP 0007.scaffold00024 1235697 1 A T scaffold13294 ScafM SNP 0007.scaffold00024 1235719 1 G C scaffold13294 ScafM SNP 0007.scaffold00024 1235722 1 C G scaffold13294 ScafM SNP 0007.scaffold00024 1235724 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1235726 1 G A scaffold13294 ScafM SNP 0007.scaffold00024 1235734 1 T C scaffold13294 ScafM SNP 0007.scaffold00024 1235744 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1235803 1 G A scaffold13294 ScafM SNP 0007.scaffold00024 1235822 1 T G scaffold13294 ScafM SNP 0007.scaffold00024 1235852 1 G T scaffold13294 ScafM SNP 0007.scaffold00024 1235856 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1235867 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1235893 1 A G scaffold13294 ScafM SNP 0007.scaffold00024 1235924 1 G A scaffold13294 ScafM INDEL 0007.scaffold00024 1235946 1 . A scaffold13294 ScafM SNP 0007.scaffold00024 1235996 1 G T scaffold13294 ScafM INDEL 0007.scaffold00024 1236021 1 C . scaffold13294 ScafM SNP 0007.scaffold00024 1236033 1 G A scaffold13294 ScafM SNP 0007.scaffold00024 1236037 1 A T scaffold13294 ScafM SNP 0007.scaffold00024 1236052 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1236082 1 C A scaffold13294 ScafM SNP 0007.scaffold00024 1236133 1 T C scaffold13294 ScafM SNP 0007.scaffold00024 1236140 1 G A scaffold13294 ScafM SNP 0007.scaffold00024 1236177 1 G A scaffold13294 ScafM INDEL 0007.scaffold00024 1236217 1 T . scaffold13294 ScafM SNP 0007.scaffold00024 1236219 2 CC AT scaffold13294 ScafM INDEL 0007.scaffold00024 1236222 1 G . scaffold13294 ScafM SNP 0007.scaffold00024 1236224 1 G A scaffold13294 ScafM INDEL 0007.scaffold00024 1236226 1 A . scaffold13294 ScafM SNP 0007.scaffold00024 1236237 1 C T scaffold13294 ScafM SNP 0007.scaffold00024 1236254 1 G T scaffold13294 ScafM SNP 0007.scaffold00024 1236256 1 C A scaffold13294 ScafM SNP 0007.scaffold00024 1236261 1 A T scaffold13294 ScafM SNP 0007.scaffold00024 1236277 1 T C scaffold13294 ScafM SNP 0007.scaffold00024 1236281 1 A G scaffold13294 ScafM SNP 0007.scaffold00024 1236284 1 G A scaffold13294 ScafM SNP 0007.scaffold00024 1237645 2 CG AA scaffold21212 ScafM SNP 0007.scaffold00024 1237839 1 T C scaffold21212 ScafM SNP 0007.scaffold00024 1237877 1 C A scaffold21212 ReadM SNP 0007.scaffold00024 1238589 1 G A - ReadM SNP 0007.scaffold00024 1238646 1 T G - ReadM SNP 0007.scaffold00024 1238700 1 T C - ReadM SNP 0007.scaffold00024 1239680 1 C A - ScafM SNP 0007.scaffold00024 1239894 1 C T scaffold31559 Both SNP 0007.scaffold00024 1239943 1 A C scaffold31559 ScafM SNP 0007.scaffold00024 1240347 1 A G scaffold31559 ScafM SNP 0007.scaffold00024 1240556 1 G A scaffold31559 ScafM SNP 0007.scaffold00024 1240991 1 A T scaffold30207 ScafM SNP 0007.scaffold00024 1241152 1 A G scaffold30207 ScafM SNP 0007.scaffold00024 1241166 1 A C scaffold30207 ScafM SNP 0007.scaffold00024 1241198 1 A G scaffold30207 ScafM SNP 0007.scaffold00024 1241384 1 T A scaffold30207 ScafM SNP 0007.scaffold00024 1241413 1 G T scaffold30207 ScafM SNP 0007.scaffold00024 1241430 1 C T scaffold30207 ScafM SNP 0007.scaffold00024 1241461 1 C G scaffold30207 ScafM SNP 0007.scaffold00024 1241506 1 T C scaffold30207 ScafM SNP 0007.scaffold00024 1241510 1 T C scaffold30207 Both SNP 0007.scaffold00024 1241540 1 A G scaffold30207 ScafM SNP 0007.scaffold00024 1241542 1 C T scaffold30207 ScafM SNP 0007.scaffold00024 1241562 1 A G scaffold30207 ScafM SNP 0007.scaffold00024 1241638 1 A T scaffold30207 ScafM SNP 0007.scaffold00024 1241865 1 G A scaffold30207 ScafM SNP 0007.scaffold00024 1241912 1 G T scaffold30207 ScafM SNP 0007.scaffold00024 1241941 1 C T scaffold30207 ScafM SNP 0007.scaffold00024 1241977 1 C A scaffold30207 ReadM SNP 0007.scaffold00024 1242224 1 G A - ReadM SNP 0007.scaffold00024 1242478 1 C T - ReadM SNP 0007.scaffold00024 1242502 1 A G - ReadM SNP 0007.scaffold00024 1242550 1 G A - ReadM SNP 0007.scaffold00024 1242603 1 A T - ReadM SNP 0007.scaffold00024 1242812 1 T C - ReadM SNP 0007.scaffold00024 1243068 1 C A - ReadM SNP 0007.scaffold00024 1243256 1 T C - ScafM SNP 0007.scaffold00024 1243867 1 A C scaffold2819 ReadM SNP 0007.scaffold00024 1244184 1 A G - ReadM SNP 0007.scaffold00024 1244202 1 G A - Both SNP 0007.scaffold00024 1246105 1 A G scaffold2819 Both SNP 0007.scaffold00024 1246134 1 C T scaffold2819 ScafM INDEL 0007.scaffold00024 1246508 1 . A scaffold2819 Both SNP 0007.scaffold00024 1246697 1 G A scaffold2819 ReadM SNP 0007.scaffold00024 1246785 1 G A - Both SNP 0007.scaffold00024 1247047 1 G A scaffold2819 Both SNP 0007.scaffold00024 1247324 1 A G scaffold2819 Both INDEL 0007.scaffold00024 1247460 1 . A scaffold2819 Both SNP 0007.scaffold00024 1247484 1 A G scaffold2819 Both INDEL 0007.scaffold00024 1247823 2 AA .. scaffold2819 Both SNP 0007.scaffold00024 1248062 1 A T scaffold2819 Both SNP 0007.scaffold00024 1248267 1 G A scaffold2819 Both SNP 0007.scaffold00024 1248652 1 T G scaffold2819 Both SNP 0007.scaffold00024 1249228 1 C A scaffold2819 Both SNP 0007.scaffold00024 1249478 1 C T scaffold2819 Both SNP 0007.scaffold00024 1249496 1 G A scaffold2819 Both SNP 0007.scaffold00024 1249747 1 G A scaffold2819 Both SNP 0007.scaffold00024 1250503 1 T C scaffold2819 Both SNP 0007.scaffold00024 1250558 1 G A scaffold2819 Both SNP 0007.scaffold00024 1251137 1 C T scaffold2819 Both SNP 0007.scaffold00024 1251233 1 G A scaffold2819 Both SNP 0007.scaffold00024 1251418 1 T C scaffold2819 Both SNP 0007.scaffold00024 1251782 1 C T scaffold2819 Both SNP 0007.scaffold00024 1252227 1 C G scaffold2819 Both SNP 0007.scaffold00024 1252436 1 A G scaffold2819 Both SNP 0007.scaffold00024 1252473 1 A C scaffold2819 Both SNP 0007.scaffold00024 1252697 1 G T scaffold2819 Both SNP 0007.scaffold00024 1252766 1 T C scaffold2819 Both SNP 0007.scaffold00024 1252887 1 C T scaffold2819 ReadM SNP 0007.scaffold00024 1253199 1 A C - Both SNP 0007.scaffold00024 1253290 1 C T scaffold2819 Both SNP 0007.scaffold00024 1253684 1 G C scaffold2819 ReadM SNP 0007.scaffold00024 1255032 1 T C - ReadM SNP 0007.scaffold00024 1255259 1 T C - ReadM INDEL 0007.scaffold00024 1255735 2 AG .. - ReadM SNP 0007.scaffold00024 1255846 1 G T - ReadM SNP 0007.scaffold00024 1256021 1 T C - ReadM SNP 0007.scaffold00024 1256628 1 T C - ReadM SNP 0007.scaffold00024 1256668 1 T C - ScafM INDEL 0007.scaffold00024 1256778 4 TTCA .... scaffold2819 ReadM SNP 0007.scaffold00024 1256888 1 T C - ReadM SNP 0007.scaffold00024 1260068 1 A T - ReadM SNP 0007.scaffold00024 1260148 1 C T - Both INDEL 0007.scaffold00024 1260208 1 T . scaffold2819 Both SNP 0007.scaffold00024 1260245 1 A T scaffold2819 Both SNP 0007.scaffold00024 1260259 1 G T scaffold2819 Both SNP 0007.scaffold00024 1260398 1 C T scaffold2819 Both SNP 0007.scaffold00024 1260476 1 A T scaffold2819 ReadM INDEL 0007.scaffold00024 1260490 1 . T - ReadM SNP 0007.scaffold00024 1260618 1 T A - ReadM SNP 0007.scaffold00024 1260629 1 C T - ReadM SNP 0007.scaffold00024 1261011 1 C A - ReadM SNP 0007.scaffold00024 1261040 1 T C - ReadM SNP 0007.scaffold00024 1261505 1 A C - ReadM SNP 0007.scaffold00024 1261718 1 G A - ReadM SNP 0007.scaffold00024 1261723 1 A T - ReadM INDEL 0007.scaffold00024 1261941 1 . T - ReadM SNP 0007.scaffold00024 1262150 1 G A - ReadM SNP 0007.scaffold00024 1262186 1 A G - ReadM SNP 0007.scaffold00024 1262229 1 C G - ReadM SNP 0007.scaffold00024 1262492 1 C T - ReadM SNP 0007.scaffold00024 1262746 1 C T - ReadM SNP 0007.scaffold00024 1262905 1 C A - ReadM SNP 0007.scaffold00024 1263726 1 T C - Both SNP 0007.scaffold00024 1263996 1 G A scaffold2819 ReadM SNP 0007.scaffold00024 1264210 1 G A - ReadM SNP 0007.scaffold00024 1264240 1 T C - ReadM SNP 0007.scaffold00024 1264439 1 T A - ReadM SNP 0007.scaffold00024 1264524 1 A G - ReadM SNP 0007.scaffold00024 1264559 1 A G - ReadM SNP 0007.scaffold00024 1264565 1 A C - ReadM SNP 0007.scaffold00024 1265636 1 A C - ReadM SNP 0007.scaffold00024 1265823 1 G A - ReadM SNP 0007.scaffold00024 1266118 1 T C - ReadM SNP 0007.scaffold00024 1266191 1 A G - ReadM SNP 0007.scaffold00024 1266918 1 G T - ReadM INDEL 0007.scaffold00024 1266969 2 .. AG - ReadM SNP 0007.scaffold00024 1267076 1 G T - ReadM SNP 0007.scaffold00024 1267134 1 C T - Both SNP 0007.scaffold00024 1267584 1 C T scaffold2819 ReadM SNP 0007.scaffold00024 1267707 1 C G - ReadM SNP 0007.scaffold00024 1267776 1 A T - ReadM SNP 0007.scaffold00024 1268008 1 A G - ReadM SNP 0007.scaffold00024 1268046 1 G T - ReadM SNP 0007.scaffold00024 1268504 1 G A - ScafM SNP 0007.scaffold00024 1269564 1 T A scaffold2819 ScafM SNP 0007.scaffold00024 1269614 1 A G scaffold2819 ScafM SNP 0007.scaffold00024 1269636 1 A C scaffold2819 ScafM SNP 0007.scaffold00024 1269655 1 A C scaffold2819 Both SNP 0007.scaffold00024 1271366 1 A T scaffold2819 Both SNP 0007.scaffold00024 1271509 1 G T scaffold2819 Both SNP 0007.scaffold00024 1271619 1 C G scaffold2819 ReadM INDEL 0007.scaffold00024 1271749 1 A . - ReadM SNP 0007.scaffold00024 1271823 1 T C - Both SNP 0007.scaffold00024 1272030 1 G T scaffold2819 ReadM SNP 0007.scaffold00024 1272435 1 A C - ReadM SNP 0007.scaffold00024 1272590 1 T C - Both SNP 0007.scaffold00024 1272798 1 T A scaffold2819 ReadM INDEL 0007.scaffold00024 1273287 1 . C - ReadM SNP 0007.scaffold00024 1273921 1 C T - ReadM SNP 0007.scaffold00024 1275705 1 C T - ReadM SNP 0007.scaffold00024 1275908 1 T C - ReadM SNP 0007.scaffold00024 1276022 1 C T - Both SNP 0007.scaffold00024 1276299 1 T C scaffold2819 ScafM SNP 0007.scaffold00024 1276804 1 A G scaffold2819 ScafM SNP 0007.scaffold00024 1276885 1 G C scaffold2819 ScafM SNP 0007.scaffold00024 1276990 1 A T scaffold2819 ScafM INDEL 0007.scaffold00024 1277403 2 TA .. scaffold2819 ScafM INDEL 0007.scaffold00024 1277463 1 C . scaffold2819 ReadM INDEL 0007.scaffold00024 1277856 1 . A - ScafM SNP 0007.scaffold00024 1278231 1 G T scaffold2819 ReadM SNP 0007.scaffold00024 1278268 1 C T - Both SNP 0007.scaffold00024 1279035 1 A G scaffold2819 ReadM SNP 0007.scaffold00024 1279577 1 A G - ReadM SNP 0007.scaffold00024 1279713 1 A C - ReadM SNP 0007.scaffold00024 1280171 1 A T - ReadM SNP 0007.scaffold00024 1280233 1 G A - ReadM SNP 0007.scaffold00024 1280327 1 T A - Both SNP 0007.scaffold00024 1281666 1 G A scaffold2819 Both SNP 0007.scaffold00024 1282113 1 T C scaffold2819 Both SNP 0007.scaffold00024 1282212 1 A T scaffold2819 ScafM SNP 0007.scaffold00024 1282277 1 T C scaffold2819 ScafM INDEL 0007.scaffold00024 1282481 2 AT .. scaffold2819 ScafM SNP 0007.scaffold00024 1282635 1 G A scaffold2819 ReadM SNP 0007.scaffold00024 1289259 1 C T - ReadM SNP 0007.scaffold00024 1292715 1 A G - ReadM SNP 0007.scaffold00024 1292817 1 A C - ReadM SNP 0007.scaffold00024 1292944 1 C A - ReadM SNP 0007.scaffold00024 1293046 1 G A - ReadM SNP 0007.scaffold00024 1293140 1 T C - ScafM INDEL 0007.scaffold00024 1298418 1 . A scaffold1636 ScafM SNP 0007.scaffold00024 1298474 1 A T scaffold1636 Both SNP 0007.scaffold00024 1298537 1 T G scaffold1636 Both SNP 0007.scaffold00024 1299730 1 A G scaffold1636 ReadM INDEL 0007.scaffold00024 1300179 3 ... TTT - ReadM SNP 0007.scaffold00024 1300202 1 A G - ReadM SNP 0007.scaffold00024 1300343 1 C T - ReadM SNP 0007.scaffold00024 1300499 1 A T - ReadM SNP 0007.scaffold00024 1300543 1 T C - ReadM SNP 0007.scaffold00024 1300691 1 A G - ReadM SNP 0007.scaffold00024 1300763 1 G A - ReadM INDEL 0007.scaffold00024 1301032 1 . C - ReadM SNP 0007.scaffold00024 1301037 1 C T - ReadM SNP 0007.scaffold00024 1301187 1 T A - ReadM SNP 0007.scaffold00024 1301219 1 A G - ReadM SNP 0007.scaffold00024 1301517 1 C T - ReadM SNP 0007.scaffold00024 1301738 1 T C - ScafM SNP 0007.scaffold00024 1302772 1 T C scaffold1636 ScafM INDEL 0007.scaffold00024 1302799 9 AAATTCAAC ......... scaffold1636 Both SNP 0007.scaffold00024 1302927 1 C G scaffold1636 Both SNP 0007.scaffold00024 1303774 1 A T scaffold1636 ScafM SNP 0007.scaffold00024 1304179 1 T C scaffold1636 ScafM SNP 0007.scaffold00024 1304188 1 A G scaffold1636 ScafM SNP 0007.scaffold00024 1304313 1 G A scaffold1636 ScafM SNP 0007.scaffold00024 1304368 1 G T scaffold1636 ScafM SNP 0007.scaffold00024 1304517 1 A G scaffold1636 ScafM INDEL 0007.scaffold00024 1304578 1 A . scaffold1636 ScafM SNP 0007.scaffold00024 1304843 1 A G scaffold1636 ReadM SNP 0007.scaffold00024 1305105 1 C T - ReadM SNP 0007.scaffold00024 1305111 1 T A - Both SNP 0007.scaffold00024 1305412 1 T C scaffold1636 ScafM INDEL 0007.scaffold00024 1305520 5 TAATA ..... scaffold1636 Both SNP 0007.scaffold00024 1305579 1 G A scaffold1636 Both SNP 0007.scaffold00024 1305585 1 A G scaffold1636 ReadM SNP 0007.scaffold00024 1306080 1 G A - ReadM SNP 0007.scaffold00024 1306167 1 T C - Both SNP 0007.scaffold00024 1306460 1 T C scaffold1636 Both SNP 0007.scaffold00024 1306592 1 C T scaffold1636 ReadM SNP 0007.scaffold00024 1306975 1 T C - ReadM INDEL 0007.scaffold00024 1306994 1 T . - ReadM SNP 0007.scaffold00024 1307619 1 A T - Both SNP 0007.scaffold00024 1308038 1 G T scaffold1636 Both SNP 0007.scaffold00024 1308057 1 C T scaffold1636 Both SNP 0007.scaffold00024 1308750 1 A C scaffold1636 Both SNP 0007.scaffold00024 1308789 1 T G scaffold1636 ScafM SNP 0007.scaffold00024 1308889 1 A C scaffold1636 Both SNP 0007.scaffold00024 1309011 1 G A scaffold1636 Both SNP 0007.scaffold00024 1309167 1 G A scaffold1636 ReadM SNP 0007.scaffold00024 1309447 1 G A - Both SNP 0007.scaffold00024 1309722 1 G A scaffold1636 Both SNP 0007.scaffold00024 1309730 1 T C scaffold1636 Both SNP 0007.scaffold00024 1309863 1 A G scaffold1636 ReadM SNP 0007.scaffold00024 1310151 1 G A - ReadM SNP 0007.scaffold00024 1310227 1 A T - ReadM SNP 0007.scaffold00024 1310248 1 T A - ReadM SNP 0007.scaffold00024 1310301 1 A G - ReadM SNP 0007.scaffold00024 1310362 1 G A - ReadM SNP 0007.scaffold00024 1310380 1 G A - ReadM SNP 0007.scaffold00024 1310633 1 G C - ReadM SNP 0007.scaffold00024 1310897 1 T A - ReadM SNP 0007.scaffold00024 1311094 1 T C - ReadM SNP 0007.scaffold00024 1311193 1 G T - ReadM SNP 0007.scaffold00024 1311719 1 A C - ReadM SNP 0007.scaffold00024 1311925 1 C T - ReadM SNP 0007.scaffold00024 1312470 1 G A - ReadM SNP 0007.scaffold00024 1313142 1 C A - ReadM SNP 0007.scaffold00024 1313367 1 G A - ReadM SNP 0007.scaffold00024 1313676 1 A G - ReadM SNP 0007.scaffold00024 1313720 1 G A - ReadM SNP 0007.scaffold00024 1313736 1 A T - ReadM SNP 0007.scaffold00024 1314027 1 G A - ReadM SNP 0007.scaffold00024 1315042 1 A T - ReadM SNP 0007.scaffold00024 1317705 1 G C - ReadM SNP 0007.scaffold00024 1317731 1 T G - ReadM SNP 0007.scaffold00024 1317904 1 C T - ReadM SNP 0007.scaffold00024 1318105 1 T A - ReadM SNP 0007.scaffold00024 1318323 1 T C - ReadM SNP 0007.scaffold00024 1319616 1 G A - ReadM SNP 0007.scaffold00024 1319762 1 A G - ReadM SNP 0007.scaffold00024 1320108 1 G A - ReadM SNP 0007.scaffold00024 1320783 1 T G - ReadM SNP 0007.scaffold00024 1320856 1 A C - ScafM INDEL 0007.scaffold00024 1321179 1 T . scaffold13942 ScafM SNP 0007.scaffold00024 1321239 1 G A scaffold13942 ReadM SNP 0007.scaffold00024 1321609 1 C T - ReadM SNP 0007.scaffold00024 1322947 1 G C - ScafM SNP 0007.scaffold00024 1323133 1 T C scaffold13942 ScafM SNP 0007.scaffold00024 1323247 1 A C scaffold13942 ScafM SNP 0007.scaffold00024 1323452 1 T A scaffold13942 ScafM SNP 0007.scaffold00024 1323484 1 T A scaffold13942 ReadM INDEL 0007.scaffold00024 1323591 1 . G - ScafM INDEL 0007.scaffold00024 1324102 1 C . scaffold13942 Both SNP 0007.scaffold00024 1324171 1 A T scaffold13942 ReadM SNP 0007.scaffold00024 1324619 1 C T - ReadM SNP 0007.scaffold00024 1325460 1 A G - ReadM SNP 0007.scaffold00024 1325584 1 A G - ReadM SNP 0007.scaffold00024 1325718 1 C T - ReadM SNP 0007.scaffold00024 1325872 1 A T - ReadM SNP 0007.scaffold00024 1325947 1 G T - ReadM SNP 0007.scaffold00024 1326195 1 T C - ReadM INDEL 0007.scaffold00024 1326247 1 A . - ReadM INDEL 0007.scaffold00024 1326856 1 . A - ReadM SNP 0007.scaffold00024 1327593 1 T A - ReadM SNP 0007.scaffold00024 1327765 1 T C - ReadM SNP 0007.scaffold00024 1328575 1 T A - ReadM SNP 0007.scaffold00024 1328779 1 G T - ReadM SNP 0007.scaffold00024 1329004 1 A G - ReadM SNP 0007.scaffold00024 1329487 1 T G - ReadM SNP 0007.scaffold00024 1329491 1 A G - ReadM SNP 0007.scaffold00024 1329862 1 A C - ReadM SNP 0007.scaffold00024 1329904 1 T C - ReadM SNP 0007.scaffold00024 1331453 1 A G - ScafM SNP 0007.scaffold00024 1331461 1 C T scaffold31444 ScafM SNP 0007.scaffold00024 1333638 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1333710 1 A G scaffold3709 ScafM INDEL 0007.scaffold00024 1333880 55 ....................................................... AAACTATAAGAATTCATGTGTAATTTATTTAATAGAAAAACAATATCCAAAAATC scaffold3709 ReadM SNP 0007.scaffold00024 1334079 1 C G - ScafM SNP 0007.scaffold00024 1334346 1 A C scaffold3709 ScafM SNP 0007.scaffold00024 1334440 1 A T scaffold3709 ScafM SNP 0007.scaffold00024 1334479 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1334709 1 G C scaffold3709 ScafM SNP 0007.scaffold00024 1334736 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1334841 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1335537 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1335952 1 C A scaffold3709 Both SNP 0007.scaffold00024 1336107 1 T G scaffold3709 Both SNP 0007.scaffold00024 1336475 1 C T scaffold3709 Both SNP 0007.scaffold00024 1336477 1 G T scaffold3709 ScafM INDEL 0007.scaffold00024 1336534 69 ..................................................................... ACGAGTTTTGATGGTGTCCGTTCCTTCGTTTTCTCAAGTCTTGAAGAATGAACTTTGACTATAATAAAG scaffold3709 ScafM SNP 0007.scaffold00024 1336623 1 A T scaffold3709 ScafM INDEL 0007.scaffold00024 1337512 3 ... ATA scaffold3709 ScafM SNP 0007.scaffold00024 1337560 1 G T scaffold3709 Both SNP 0007.scaffold00024 1337566 1 C T scaffold3709 Both SNP 0007.scaffold00024 1337617 1 A C scaffold3709 ScafM SNP 0007.scaffold00024 1337623 1 A G scaffold3709 Both SNP 0007.scaffold00024 1337792 1 T G scaffold3709 ScafM SNP 0007.scaffold00024 1337896 1 A G scaffold3709 Both SNP 0007.scaffold00024 1338067 1 G C scaffold3709 Both SNP 0007.scaffold00024 1338303 1 C T scaffold3709 ScafM INDEL 0007.scaffold00024 1338336 3 CCA ... scaffold3709 Both SNP 0007.scaffold00024 1338511 1 G C scaffold3709 Both SNP 0007.scaffold00024 1338551 1 G A scaffold3709 Both SNP 0007.scaffold00024 1338572 1 G T scaffold3709 Both SNP 0007.scaffold00024 1338582 1 C A scaffold3709 Both SNP 0007.scaffold00024 1338720 1 T G scaffold3709 Both SNP 0007.scaffold00024 1339013 1 A T scaffold3709 Both SNP 0007.scaffold00024 1339031 1 T A scaffold3709 Both SNP 0007.scaffold00024 1339176 1 A G scaffold3709 Both SNP 0007.scaffold00024 1339307 1 G T scaffold3709 Both SNP 0007.scaffold00024 1339365 1 T G scaffold3709 Both SNP 0007.scaffold00024 1339424 1 C A scaffold3709 Both SNP 0007.scaffold00024 1339433 1 G A scaffold3709 Both SNP 0007.scaffold00024 1339469 1 C T scaffold3709 Both SNP 0007.scaffold00024 1339523 1 C G scaffold3709 Both SNP 0007.scaffold00024 1339706 1 C T scaffold3709 Both SNP 0007.scaffold00024 1339725 1 A T scaffold3709 Both SNP 0007.scaffold00024 1339850 1 A G scaffold3709 Both SNP 0007.scaffold00024 1340006 1 T C scaffold3709 Both SNP 0007.scaffold00024 1340110 1 T G scaffold3709 ScafM INDEL 0007.scaffold00024 1340178 10 .......... TCTTTTCTTT scaffold3709 ScafM INDEL 0007.scaffold00024 1340192 2 GT .. scaffold3709 Both SNP 0007.scaffold00024 1340273 1 A T scaffold3709 ScafM SNP 0007.scaffold00024 1340339 1 C A scaffold3709 ScafM SNP 0007.scaffold00024 1340348 1 C G scaffold3709 ScafM SNP 0007.scaffold00024 1340412 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1340452 1 A C scaffold3709 ScafM SNP 0007.scaffold00024 1340478 1 G A scaffold3709 ScafM INDEL 0007.scaffold00024 1340505 1 T . scaffold3709 ScafM INDEL 0007.scaffold00024 1340507 2 CT .. scaffold3709 ScafM INDEL 0007.scaffold00024 1340510 6 CCAAAC ...... scaffold3709 ScafM INDEL 0007.scaffold00024 1340578 3 ... TCA scaffold3709 ScafM SNP 0007.scaffold00024 1340599 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1340614 1 A G scaffold3709 ScafM INDEL 0007.scaffold00024 1340706 4 .... ATTA scaffold3709 ScafM SNP 0007.scaffold00024 1340726 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1340738 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1340760 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1340917 1 G A scaffold3709 ScafM INDEL 0007.scaffold00024 1341130 13 ............. TAAACTTTTTTTT scaffold3709 Both INDEL 0007.scaffold00024 1341279 1 . A scaffold3709 Both SNP 0007.scaffold00024 1341419 1 C T scaffold3709 Both SNP 0007.scaffold00024 1341428 1 T C scaffold3709 ScafM INDEL 0007.scaffold00024 1341488 4 AAAG .... scaffold3709 ScafM SNP 0007.scaffold00024 1341513 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1341536 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1341552 1 T G scaffold3709 ScafM SNP 0007.scaffold00024 1341567 1 C T scaffold3709 Both SNP 0007.scaffold00024 1341584 1 T A scaffold3709 Both SNP 0007.scaffold00024 1341630 1 T A scaffold3709 Both SNP 0007.scaffold00024 1341656 1 C T scaffold3709 Both SNP 0007.scaffold00024 1341679 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1341713 2 GA AG scaffold3709 ScafM SNP 0007.scaffold00024 1341733 1 A G scaffold3709 ScafM INDEL 0007.scaffold00024 1341762 4 TTAG .... scaffold3709 ScafM SNP 0007.scaffold00024 1341773 2 TG CT scaffold3709 ScafM SNP 0007.scaffold00024 1341783 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1341791 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1341794 2 CC TT scaffold3709 ScafM SNP 0007.scaffold00024 1341799 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1341806 1 G A scaffold3709 ScafM INDEL 0007.scaffold00024 1341813 3 ATA ... scaffold3709 Both SNP 0007.scaffold00024 1341843 1 A G scaffold3709 Both SNP 0007.scaffold00024 1341847 1 G A scaffold3709 Both SNP 0007.scaffold00024 1341992 1 C T scaffold3709 Both SNP 0007.scaffold00024 1342013 1 A G scaffold3709 Both SNP 0007.scaffold00024 1342038 1 A G scaffold3709 Both SNP 0007.scaffold00024 1342100 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1342206 1 C T scaffold3709 ReadM SNP 0007.scaffold00024 1342421 1 T C - ReadM SNP 0007.scaffold00024 1342514 1 C G - ReadM SNP 0007.scaffold00024 1342538 1 T A - ScafM INDEL 0007.scaffold00024 1342776 1 G . scaffold3709 ScafM SNP 0007.scaffold00024 1342802 1 A C scaffold3709 ScafM SNP 0007.scaffold00024 1342857 2 AA TT scaffold3709 Both SNP 0007.scaffold00024 1342893 1 G C scaffold3709 ScafM INDEL 0007.scaffold00024 1343277 1 C . scaffold1119 ScafM SNP 0007.scaffold00024 1343300 1 G A scaffold1119 ScafM SNP 0007.scaffold00024 1343309 1 A G scaffold1119 ScafM SNP 0007.scaffold00024 1343326 1 A G scaffold1119 ScafM SNP 0007.scaffold00024 1343339 1 G A scaffold1119 ScafM SNP 0007.scaffold00024 1343466 1 G C scaffold1119 ScafM INDEL 0007.scaffold00024 1343528 1 . T scaffold1119 ScafM SNP 0007.scaffold00024 1343812 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1343838 2 CA GG scaffold3709 ScafM SNP 0007.scaffold00024 1343976 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1343984 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1343993 2 AT TC scaffold3709 ScafM SNP 0007.scaffold00024 1344012 2 CC AT scaffold3709 ScafM SNP 0007.scaffold00024 1344047 1 A C scaffold3709 ScafM SNP 0007.scaffold00024 1344073 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1344081 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1344086 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1344094 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1344105 2 GT AC scaffold3709 ScafM SNP 0007.scaffold00024 1344116 1 A G scaffold3709 ReadM SNP 0007.scaffold00024 1344275 1 C A - ReadM SNP 0007.scaffold00024 1344302 1 T C - ReadM SNP 0007.scaffold00024 1344407 1 G A - ReadM SNP 0007.scaffold00024 1344551 1 A T - ReadM SNP 0007.scaffold00024 1344575 1 A C - ReadM SNP 0007.scaffold00024 1344611 1 C A - Both SNP 0007.scaffold00024 1344672 1 G C scaffold3709 Both SNP 0007.scaffold00024 1344688 1 A G scaffold3709 Both SNP 0007.scaffold00024 1344752 1 C A scaffold3709 ReadM SNP 0007.scaffold00024 1344822 1 A C - ReadM SNP 0007.scaffold00024 1344873 1 A G - ReadM SNP 0007.scaffold00024 1344981 1 A G - ReadM SNP 0007.scaffold00024 1345028 1 T C - ReadM SNP 0007.scaffold00024 1345040 1 G C - ReadM SNP 0007.scaffold00024 1345063 1 G C - ReadM SNP 0007.scaffold00024 1345312 1 C T - ReadM SNP 0007.scaffold00024 1345324 1 C A - ReadM SNP 0007.scaffold00024 1345413 1 T C - ReadM SNP 0007.scaffold00024 1345469 1 A T - ReadM SNP 0007.scaffold00024 1345503 1 C T - ReadM SNP 0007.scaffold00024 1345530 1 T C - ReadM SNP 0007.scaffold00024 1345656 1 G A - ReadM SNP 0007.scaffold00024 1345661 1 C A - ReadM SNP 0007.scaffold00024 1345698 1 G T - ReadM SNP 0007.scaffold00024 1345775 1 C A - ReadM SNP 0007.scaffold00024 1345839 1 T A - ReadM SNP 0007.scaffold00024 1345898 1 G T - ReadM INDEL 0007.scaffold00024 1345966 1 T . - ReadM SNP 0007.scaffold00024 1345996 1 T G - ReadM SNP 0007.scaffold00024 1346065 1 A G - ReadM SNP 0007.scaffold00024 1346093 1 G A - ReadM SNP 0007.scaffold00024 1346141 1 T C - ReadM SNP 0007.scaffold00024 1346184 1 A G - ReadM SNP 0007.scaffold00024 1346276 1 C G - ReadM SNP 0007.scaffold00024 1346324 1 C T - ReadM SNP 0007.scaffold00024 1346327 1 C T - ReadM SNP 0007.scaffold00024 1346345 1 A T - ReadM SNP 0007.scaffold00024 1346378 1 G C - ReadM SNP 0007.scaffold00024 1346433 1 A G - ReadM SNP 0007.scaffold00024 1346444 1 A G - ReadM SNP 0007.scaffold00024 1346468 1 G A - ReadM SNP 0007.scaffold00024 1346542 1 T C - ReadM SNP 0007.scaffold00024 1346603 1 C A - ReadM SNP 0007.scaffold00024 1346663 1 G A - ReadM SNP 0007.scaffold00024 1346758 1 G A - ReadM SNP 0007.scaffold00024 1346798 1 G A - ReadM SNP 0007.scaffold00024 1346825 1 G T - ReadM SNP 0007.scaffold00024 1346908 1 G C - ReadM SNP 0007.scaffold00024 1347077 1 A T - ReadM SNP 0007.scaffold00024 1347211 1 T G - ReadM SNP 0007.scaffold00024 1347242 1 G C - ReadM SNP 0007.scaffold00024 1347269 1 C T - ReadM SNP 0007.scaffold00024 1347477 1 C G - ReadM SNP 0007.scaffold00024 1347500 1 T C - ReadM SNP 0007.scaffold00024 1347575 1 C T - ReadM SNP 0007.scaffold00024 1347595 1 C G - ReadM SNP 0007.scaffold00024 1347611 1 G A - ReadM SNP 0007.scaffold00024 1347783 1 G A - ReadM SNP 0007.scaffold00024 1347809 1 T C - ReadM SNP 0007.scaffold00024 1347966 1 A G - ReadM SNP 0007.scaffold00024 1348003 1 C T - ReadM SNP 0007.scaffold00024 1348055 1 C G - ReadM SNP 0007.scaffold00024 1348095 1 A C - ReadM SNP 0007.scaffold00024 1348518 1 T C - ReadM SNP 0007.scaffold00024 1348558 1 G A - ReadM SNP 0007.scaffold00024 1348711 1 G A - ReadM SNP 0007.scaffold00024 1348835 1 T C - ReadM SNP 0007.scaffold00024 1348933 1 A T - ReadM SNP 0007.scaffold00024 1348958 1 C T - ReadM SNP 0007.scaffold00024 1349003 1 T G - ReadM SNP 0007.scaffold00024 1349009 1 T A - ReadM SNP 0007.scaffold00024 1349086 1 T C - ReadM SNP 0007.scaffold00024 1349202 1 C A - ReadM SNP 0007.scaffold00024 1349254 1 G A - ReadM INDEL 0007.scaffold00024 1349347 1 . C - ReadM SNP 0007.scaffold00024 1349472 1 A G - ReadM SNP 0007.scaffold00024 1349558 1 A T - ReadM SNP 0007.scaffold00024 1349586 1 T C - ReadM SNP 0007.scaffold00024 1349610 1 T A - ReadM SNP 0007.scaffold00024 1349615 1 C T - ReadM SNP 0007.scaffold00024 1349678 1 C T - ReadM INDEL 0007.scaffold00024 1349758 1 A . - ReadM SNP 0007.scaffold00024 1349944 1 G T - ReadM SNP 0007.scaffold00024 1349987 1 T C - ReadM SNP 0007.scaffold00024 1350034 1 A G - ReadM SNP 0007.scaffold00024 1350271 1 A G - ReadM SNP 0007.scaffold00024 1350291 1 T C - Both SNP 0007.scaffold00024 1350515 1 A T scaffold3709 Both SNP 0007.scaffold00024 1350596 1 T C scaffold3709 ReadM INDEL 0007.scaffold00024 1350688 1 T . - ReadM SNP 0007.scaffold00024 1350732 1 G T - Both SNP 0007.scaffold00024 1350772 1 T C scaffold3709 Both SNP 0007.scaffold00024 1350779 1 G T scaffold3709 ScafM SNP 0007.scaffold00024 1350892 2 AC GT scaffold3709 ScafM SNP 0007.scaffold00024 1350908 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1350915 1 T C scaffold3709 Both SNP 0007.scaffold00024 1350927 1 A G scaffold3709 ReadM SNP 0007.scaffold00024 1351137 1 G A - ReadM SNP 0007.scaffold00024 1351152 1 A G - ReadM SNP 0007.scaffold00024 1351333 1 G A - Both SNP 0007.scaffold00024 1351416 1 A G scaffold3709 Both SNP 0007.scaffold00024 1351430 1 T A scaffold3709 Both SNP 0007.scaffold00024 1351456 1 G T scaffold3709 Both SNP 0007.scaffold00024 1351613 1 T C scaffold3709 ReadM SNP 0007.scaffold00024 1351635 1 G A - ReadM SNP 0007.scaffold00024 1351678 1 A G - ReadM SNP 0007.scaffold00024 1351697 1 C T - ReadM SNP 0007.scaffold00024 1351732 1 C G - ReadM SNP 0007.scaffold00024 1351775 1 A T - ReadM SNP 0007.scaffold00024 1351809 1 C A - ReadM SNP 0007.scaffold00024 1351854 1 T G - ScafM SNP 0007.scaffold00024 1352523 1 T A scaffold3709 ScafM INDEL 0007.scaffold00024 1352713 1 T . scaffold3709 ScafM SNP 0007.scaffold00024 1352737 1 T A scaffold3709 ScafM SNP 0007.scaffold00024 1352753 1 C T scaffold3709 ScafM SNP 0007.scaffold00024 1352774 1 T C scaffold3709 Both SNP 0007.scaffold00024 1352836 1 A T scaffold3709 Both SNP 0007.scaffold00024 1352925 1 C A scaffold3709 Both SNP 0007.scaffold00024 1352988 1 A C scaffold3709 Both SNP 0007.scaffold00024 1353001 1 A C scaffold3709 Both SNP 0007.scaffold00024 1353249 1 T C scaffold3709 Both SNP 0007.scaffold00024 1353308 1 T A scaffold3709 ScafM SNP 0007.scaffold00024 1353371 1 C T scaffold3709 ScafM INDEL 0007.scaffold00024 1353372 2 .. AC scaffold3709 ScafM SNP 0007.scaffold00024 1353381 1 T G scaffold3709 Both INDEL 0007.scaffold00024 1353422 2 TC .. scaffold3709 Both SNP 0007.scaffold00024 1353437 1 A G scaffold3709 Both SNP 0007.scaffold00024 1353891 1 G A scaffold3709 Both SNP 0007.scaffold00024 1354107 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1354191 1 G A scaffold3709 ScafM SNP 0007.scaffold00024 1354220 1 T C scaffold3709 ScafM INDEL 0007.scaffold00024 1354243 7 ....... ACTTGAA scaffold3709 ScafM SNP 0007.scaffold00024 1354478 1 C A scaffold3709 ReadM SNP 0007.scaffold00024 1354815 1 A T - ReadM SNP 0007.scaffold00024 1354895 1 A G - ScafM SNP 0007.scaffold00024 1354959 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1354963 1 G C scaffold3709 ScafM INDEL 0007.scaffold00024 1354987 3 ... TAC scaffold3709 Both INDEL 0007.scaffold00024 1355153 1 . T scaffold3709 Both SNP 0007.scaffold00024 1355262 1 C T scaffold3709 Both SNP 0007.scaffold00024 1355363 1 A T scaffold3709 Both SNP 0007.scaffold00024 1355449 1 A G scaffold3709 ReadM SNP 0007.scaffold00024 1355611 1 A G - ReadM INDEL 0007.scaffold00024 1355753 2 .. CT - ReadM SNP 0007.scaffold00024 1355860 1 A G - ReadM SNP 0007.scaffold00024 1355946 1 C T - ReadM SNP 0007.scaffold00024 1355950 1 A G - ReadM SNP 0007.scaffold00024 1356036 1 T A - ReadM SNP 0007.scaffold00024 1356226 1 T G - ReadM SNP 0007.scaffold00024 1356311 1 A G - ReadM SNP 0007.scaffold00024 1356382 1 A G - ReadM SNP 0007.scaffold00024 1356450 1 A G - ReadM SNP 0007.scaffold00024 1356455 1 T G - ReadM SNP 0007.scaffold00024 1356820 1 T G - ReadM SNP 0007.scaffold00024 1356911 1 T G - ReadM SNP 0007.scaffold00024 1357146 1 G T - ReadM INDEL 0007.scaffold00024 1357154 1 T . - ReadM SNP 0007.scaffold00024 1357174 1 G T - ReadM SNP 0007.scaffold00024 1357433 1 G A - ScafM INDEL 0007.scaffold00024 1357676 6 TATGTA ...... scaffold3709 Both SNP 0007.scaffold00024 1357705 1 G T scaffold3709 Both INDEL 0007.scaffold00024 1357829 1 A . scaffold3709 Both SNP 0007.scaffold00024 1357866 1 C T scaffold3709 ReadM SNP 0007.scaffold00024 1358189 1 T C - ReadM SNP 0007.scaffold00024 1358206 1 G A - ReadM SNP 0007.scaffold00024 1358251 1 G C - Both INDEL 0007.scaffold00024 1358314 1 . A scaffold3709 ScafM SNP 0007.scaffold00024 1358490 1 G A scaffold3709 Both SNP 0007.scaffold00024 1358525 1 G C scaffold3709 Both SNP 0007.scaffold00024 1358573 1 T C scaffold3709 Both SNP 0007.scaffold00024 1358599 1 A G scaffold3709 Both SNP 0007.scaffold00024 1358615 1 A T scaffold3709 Both SNP 0007.scaffold00024 1358727 1 A T scaffold3709 Both INDEL 0007.scaffold00024 1358747 1 A . scaffold3709 ScafM SNP 0007.scaffold00024 1358766 2 AT TA scaffold3709 ScafM SNP 0007.scaffold00024 1358780 1 A G scaffold3709 Both SNP 0007.scaffold00024 1358919 1 C T scaffold3709 Both SNP 0007.scaffold00024 1358924 1 A C scaffold3709 Both SNP 0007.scaffold00024 1358950 1 C A scaffold3709 Both SNP 0007.scaffold00024 1358954 1 G A scaffold3709 Both SNP 0007.scaffold00024 1359211 1 T C scaffold3709 ReadM SNP 0007.scaffold00024 1359372 1 G A - ReadM SNP 0007.scaffold00024 1359385 1 C T - ReadM SNP 0007.scaffold00024 1359581 1 C T - ReadM SNP 0007.scaffold00024 1359661 1 T G - ReadM SNP 0007.scaffold00024 1359949 1 G A - ReadM SNP 0007.scaffold00024 1360158 1 C A - ReadM SNP 0007.scaffold00024 1360277 1 A G - ReadM SNP 0007.scaffold00024 1360325 1 T C - Both SNP 0007.scaffold00024 1360402 1 G A scaffold3709 Both SNP 0007.scaffold00024 1360424 1 G A scaffold3709 Both SNP 0007.scaffold00024 1360459 1 G T scaffold3709 Both SNP 0007.scaffold00024 1360471 1 T C scaffold3709 Both SNP 0007.scaffold00024 1360598 1 T C scaffold3709 Both SNP 0007.scaffold00024 1360690 1 C T scaffold3709 Both SNP 0007.scaffold00024 1360743 1 A G scaffold3709 ScafM INDEL 0007.scaffold00024 1360795 12 ............ ATTGAAGACGAA scaffold3709 Both SNP 0007.scaffold00024 1360835 1 C T scaffold3709 Both SNP 0007.scaffold00024 1360848 1 T G scaffold3709 Both SNP 0007.scaffold00024 1360991 1 A G scaffold3709 ScafM SNP 0007.scaffold00024 1361044 1 A T scaffold3709 Both SNP 0007.scaffold00024 1361083 1 G A scaffold3709 Both SNP 0007.scaffold00024 1361106 1 A T scaffold3709 ReadM INDEL 0007.scaffold00024 1361144 1 A . - ReadM SNP 0007.scaffold00024 1361251 1 G A - ReadM SNP 0007.scaffold00024 1361320 1 G A - ReadM SNP 0007.scaffold00024 1361537 1 C T - ReadM SNP 0007.scaffold00024 1361555 1 A G - ScafM INDEL 0007.scaffold00024 1361656 1 G . scaffold3709 ScafM INDEL 0007.scaffold00024 1361658 1 C . scaffold3709 ScafM SNP 0007.scaffold00024 1361660 1 A G scaffold3709 Both SNP 0007.scaffold00024 1361749 1 G T scaffold3709 Both SNP 0007.scaffold00024 1361978 1 A G scaffold3709 Both SNP 0007.scaffold00024 1362190 1 G C scaffold3709 ReadM SNP 0007.scaffold00024 1362234 1 C T - ReadM SNP 0007.scaffold00024 1362254 1 T C - ReadM SNP 0007.scaffold00024 1362256 1 T C - ReadM SNP 0007.scaffold00024 1362321 1 C T - ReadM SNP 0007.scaffold00024 1362462 1 A C - ReadM SNP 0007.scaffold00024 1362517 1 G T - ReadM SNP 0007.scaffold00024 1362531 1 C A - ReadM SNP 0007.scaffold00024 1362602 1 A C - ReadM SNP 0007.scaffold00024 1362607 1 T A - ReadM SNP 0007.scaffold00024 1362670 1 T C - ReadM SNP 0007.scaffold00024 1362697 1 C T - ReadM SNP 0007.scaffold00024 1362821 1 G A - ReadM SNP 0007.scaffold00024 1362882 1 T C - ReadM SNP 0007.scaffold00024 1362958 1 A G - ReadM SNP 0007.scaffold00024 1363031 1 G T - ReadM SNP 0007.scaffold00024 1363062 1 C G - ReadM SNP 0007.scaffold00024 1363092 1 A G - Both SNP 0007.scaffold00024 1363530 1 A G scaffold3709 Both SNP 0007.scaffold00024 1363574 1 G C scaffold3709 ScafM SNP 0007.scaffold00024 1363649 1 T C scaffold3709 ReadM INDEL 0007.scaffold00024 1363669 1 . T - ScafM INDEL 0007.scaffold00024 1363669 8 ........ TAAAGCAT scaffold3709 ReadM SNP 0007.scaffold00024 1363721 1 A G - ReadM SNP 0007.scaffold00024 1363784 1 C T - ReadM INDEL 0007.scaffold00024 1363836 1 T . - ReadM SNP 0007.scaffold00024 1363920 1 T C - ReadM SNP 0007.scaffold00024 1363949 1 G A - Both INDEL 0007.scaffold00024 1364119 1 . G scaffold3709 ReadM SNP 0007.scaffold00024 1364230 1 T A - ReadM SNP 0007.scaffold00024 1364322 1 G A - ReadM SNP 0007.scaffold00024 1364335 1 G A - ReadM INDEL 0007.scaffold00024 1364360 1 A . - ReadM SNP 0007.scaffold00024 1364416 1 T G - ReadM SNP 0007.scaffold00024 1364468 1 T G - ReadM INDEL 0007.scaffold00024 1364579 3 ... 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A - ReadM SNP 0007.scaffold00024 1371576 1 A T - ReadM SNP 0007.scaffold00024 1371657 1 G A - ScafM INDEL 0007.scaffold00024 1371813 10 .......... GACCGTTGAC scaffold3709 ScafM INDEL 0007.scaffold00024 1371814 6 ...... TTTTTG scaffold3709 ScafM SNP 0007.scaffold00024 1371830 1 T C scaffold3709 ScafM SNP 0007.scaffold00024 1371835 1 A G scaffold3709 ScafM INDEL 0007.scaffold00024 1371847 1 . 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ReadM SNP 0007.scaffold00024 1425136 1 C T - ReadM SNP 0007.scaffold00024 1425191 1 A G - ReadM SNP 0007.scaffold00024 1425287 1 C T - ReadM SNP 0007.scaffold00024 1425329 1 G A - ReadM SNP 0007.scaffold00024 1425360 1 G A - ReadM SNP 0007.scaffold00024 1425394 1 G A - ReadM SNP 0007.scaffold00024 1425457 1 A C - ReadM SNP 0007.scaffold00024 1425463 1 C T - ReadM SNP 0007.scaffold00024 1425577 1 A G - ReadM SNP 0007.scaffold00024 1425634 1 G A - ReadM SNP 0007.scaffold00024 1425640 1 G A - ReadM SNP 0007.scaffold00024 1425796 1 A C - ReadM SNP 0007.scaffold00024 1426039 1 G A - ReadM INDEL 0007.scaffold00024 1426187 1 T . - ReadM SNP 0007.scaffold00024 1426208 1 T A - ReadM SNP 0007.scaffold00024 1426689 1 C A - ReadM SNP 0007.scaffold00024 1426797 1 G A - ReadM INDEL 0007.scaffold00024 1427140 1 A . - ReadM SNP 0007.scaffold00024 1427188 1 T C - ReadM SNP 0007.scaffold00024 1427455 1 G C - ReadM SNP 0007.scaffold00024 1427656 1 C T - ReadM SNP 0007.scaffold00024 1427722 1 G A - ReadM SNP 0007.scaffold00024 1427786 1 C T - ReadM SNP 0007.scaffold00024 1427796 1 G A - ReadM SNP 0007.scaffold00024 1428181 1 G C - ReadM SNP 0007.scaffold00024 1428224 1 T A - ReadM SNP 0007.scaffold00024 1428453 1 A G - ReadM SNP 0007.scaffold00024 1428508 1 G A - ReadM SNP 0007.scaffold00024 1428628 1 C T - ReadM SNP 0007.scaffold00024 1428682 1 T G - ReadM SNP 0007.scaffold00024 1428906 1 C T - ReadM INDEL 0007.scaffold00024 1429260 1 A . - ReadM INDEL 0007.scaffold00024 1429322 1 A . - ReadM SNP 0007.scaffold00024 1429345 1 G C - ReadM SNP 0007.scaffold00024 1429390 1 A G - ReadM SNP 0007.scaffold00024 1429812 1 T C - ReadM SNP 0007.scaffold00024 1429875 1 T C - ReadM SNP 0007.scaffold00024 1429987 1 A G - ReadM SNP 0007.scaffold00024 1430116 1 G A - ReadM SNP 0007.scaffold00024 1430202 1 G A - ReadM SNP 0007.scaffold00024 1430229 1 T C - ReadM SNP 0007.scaffold00024 1430236 1 T C - ReadM SNP 0007.scaffold00024 1430305 1 T C - ReadM SNP 0007.scaffold00024 1430325 1 G A - ReadM SNP 0007.scaffold00024 1430363 1 C T - ReadM SNP 0007.scaffold00024 1430471 1 G C - ReadM SNP 0007.scaffold00024 1430661 1 T G - ReadM SNP 0007.scaffold00024 1430689 1 G C - ReadM SNP 0007.scaffold00024 1430780 1 C T - ReadM SNP 0007.scaffold00024 1430792 1 T C - ReadM SNP 0007.scaffold00024 1430839 1 T G - ReadM SNP 0007.scaffold00024 1430859 1 A T - ReadM SNP 0007.scaffold00024 1430937 1 T C - ReadM SNP 0007.scaffold00024 1431122 1 G C - ReadM SNP 0007.scaffold00024 1431236 1 G C - ReadM SNP 0007.scaffold00024 1431284 1 A G - ReadM SNP 0007.scaffold00024 1431421 1 C T - ReadM SNP 0007.scaffold00024 1431431 1 A T - ReadM SNP 0007.scaffold00024 1431464 1 C T - Both SNP 0007.scaffold00024 1431670 1 C T scaffold35387 Both SNP 0007.scaffold00024 1431691 1 G C scaffold35387 Both SNP 0007.scaffold00024 1431708 1 C A scaffold35387 ScafM SNP 0007.scaffold00024 1431735 1 C G scaffold35387 ReadM SNP 0007.scaffold00024 1431794 1 G A - ReadM SNP 0007.scaffold00024 1431863 1 T A - ReadM SNP 0007.scaffold00024 1431958 1 A G - ReadM SNP 0007.scaffold00024 1431969 1 T C - ReadM SNP 0007.scaffold00024 1434494 1 T C - ReadM SNP 0007.scaffold00024 1434516 1 T A - ReadM SNP 0007.scaffold00024 1434532 1 C G - ReadM SNP 0007.scaffold00024 1434928 1 A T - ReadM SNP 0007.scaffold00024 1435781 1 C A - ReadM SNP 0007.scaffold00024 1435963 1 G A - ReadM INDEL 0007.scaffold00024 1436153 1 G . - ReadM SNP 0007.scaffold00024 1436208 1 C T - ReadM SNP 0007.scaffold00024 1436229 1 C T - ReadM SNP 0007.scaffold00024 1436367 1 G C - ReadM SNP 0007.scaffold00024 1436397 1 A G - ReadM SNP 0007.scaffold00024 1436443 1 C T - ReadM SNP 0007.scaffold00024 1439206 1 T C - ReadM SNP 0007.scaffold00024 1439210 1 G A - ReadM SNP 0007.scaffold00024 1439459 1 C A - ReadM SNP 0007.scaffold00024 1439735 1 C G - ReadM SNP 0007.scaffold00024 1439821 1 G A - ReadM SNP 0007.scaffold00024 1439826 1 A T - ReadM SNP 0007.scaffold00024 1439861 1 C T - ReadM SNP 0007.scaffold00024 1440146 1 G A - ReadM SNP 0007.scaffold00024 1440148 1 C A - ReadM SNP 0007.scaffold00024 1440303 1 C T - ReadM SNP 0007.scaffold00024 1440335 1 C T - ReadM SNP 0007.scaffold00024 1440371 1 A T - ReadM SNP 0007.scaffold00024 1440460 1 G C - ReadM SNP 0007.scaffold00024 1442795 1 G A - ReadM SNP 0007.scaffold00024 1442824 1 C T - ReadM SNP 0007.scaffold00024 1442901 1 G T - ReadM SNP 0007.scaffold00024 1442904 1 A G - ReadM SNP 0007.scaffold00024 1442981 1 C T - ReadM SNP 0007.scaffold00024 1443092 1 A T - ReadM SNP 0007.scaffold00024 1443146 1 T G - ReadM SNP 0007.scaffold00024 1443167 1 G T - ReadM SNP 0007.scaffold00024 1443248 1 A G - ReadM SNP 0007.scaffold00024 1443342 1 G A - ReadM SNP 0007.scaffold00024 1443409 1 A T - ReadM SNP 0007.scaffold00024 1443497 1 C T - ReadM SNP 0007.scaffold00024 1443836 1 A T - ReadM SNP 0007.scaffold00024 1443858 1 T C - ReadM SNP 0007.scaffold00024 1444071 1 T C - Both SNP 0007.scaffold00024 1444275 1 C T scaffold12053 Both SNP 0007.scaffold00024 1444280 1 C T scaffold12053 Both SNP 0007.scaffold00024 1444321 1 G A scaffold12053 ScafM SNP 0007.scaffold00024 1444349 1 G T scaffold12053 ScafM SNP 0007.scaffold00024 1444361 1 G A scaffold12053 ScafM INDEL 0007.scaffold00024 1444366 2 .. AC scaffold12053 Both SNP 0007.scaffold00024 1444532 1 T G scaffold12053 Both SNP 0007.scaffold00024 1444686 1 T C scaffold12053 Both INDEL 0007.scaffold00024 1444705 2 .. CT scaffold12053 Both SNP 0007.scaffold00024 1444747 1 G A scaffold12053 Both SNP 0007.scaffold00024 1444758 1 T C scaffold12053 ScafM INDEL 0007.scaffold00024 1444889 26 CAAAAGAAACCAAACTTGGATGTAAT .......................... scaffold12053 ScafM SNP 0007.scaffold00024 1444927 1 T G scaffold12053 Both SNP 0007.scaffold00024 1445063 1 A G scaffold12053 Both INDEL 0007.scaffold00024 1445098 2 .. TT scaffold12053 Both SNP 0007.scaffold00024 1445143 1 T G scaffold12053 Both SNP 0007.scaffold00024 1445188 1 C A scaffold12053 Both INDEL 0007.scaffold00024 1445379 1 . T scaffold12053 Both SNP 0007.scaffold00024 1445589 1 G A scaffold12053 Both SNP 0007.scaffold00024 1445612 1 C A scaffold12053 Both SNP 0007.scaffold00024 1445621 1 T C scaffold12053 ScafM INDEL 0007.scaffold00024 1445643 1 . G scaffold12053 ScafM SNP 0007.scaffold00024 1445652 1 C G scaffold12053 Both INDEL 0007.scaffold00024 1445688 1 C . scaffold12053 Both SNP 0007.scaffold00024 1445692 1 A G scaffold12053 Both SNP 0007.scaffold00024 1445756 1 T A scaffold12053 Both SNP 0007.scaffold00024 1445769 1 A C scaffold12053 Both SNP 0007.scaffold00024 1445904 1 C T scaffold12053 ReadM INDEL 0007.scaffold00024 1446067 1 . 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T scaffold12053 ScafM SNP 0007.scaffold00024 1447512 1 A G scaffold12053 ReadM SNP 0007.scaffold00024 1453366 1 C G - ReadM SNP 0007.scaffold00024 1453375 1 A G - ReadM SNP 0007.scaffold00024 1453384 1 T C - ReadM SNP 0007.scaffold00024 1453412 1 A T - ReadM SNP 0007.scaffold00024 1453459 1 C T - ReadM SNP 0007.scaffold00024 1453491 1 C T - ReadM INDEL 0007.scaffold00024 1453541 1 A . - ReadM SNP 0007.scaffold00024 1453589 1 G C - ReadM SNP 0007.scaffold00024 1453699 1 C A - ReadM SNP 0007.scaffold00024 1453808 1 G A - ReadM SNP 0007.scaffold00024 1453846 1 A G - ReadM SNP 0007.scaffold00024 1453953 1 C T - ReadM SNP 0007.scaffold00024 1454083 1 A T - ReadM SNP 0007.scaffold00024 1454092 1 A G - ReadM SNP 0007.scaffold00024 1454138 1 G T - ReadM SNP 0007.scaffold00024 1454214 1 C G - ReadM SNP 0007.scaffold00024 1454268 1 T G - ReadM SNP 0007.scaffold00024 1454287 1 T C - ReadM INDEL 0007.scaffold00024 1454294 1 . A - ReadM SNP 0007.scaffold00024 1454337 1 C G - ReadM SNP 0007.scaffold00024 1454494 1 A C - ReadM SNP 0007.scaffold00024 1454538 1 T C - ReadM SNP 0007.scaffold00024 1454613 1 G T - ReadM SNP 0007.scaffold00024 1454705 1 G A - ReadM SNP 0007.scaffold00024 1454726 1 A T - ReadM SNP 0007.scaffold00024 1454809 1 G A - ReadM SNP 0007.scaffold00024 1454827 1 T G - ReadM SNP 0007.scaffold00024 1454913 1 T C - ReadM SNP 0007.scaffold00024 1454950 1 A G - ReadM INDEL 0007.scaffold00024 1454997 1 . G - ReadM SNP 0007.scaffold00024 1455073 1 G T - ReadM SNP 0007.scaffold00024 1455077 1 C A - ReadM SNP 0007.scaffold00024 1455086 1 G T - ReadM SNP 0007.scaffold00024 1455170 1 T C - ReadM SNP 0007.scaffold00024 1455180 1 G A - ReadM SNP 0007.scaffold00024 1455264 1 G C - ReadM SNP 0007.scaffold00024 1455268 1 C G - ReadM INDEL 0007.scaffold00024 1455349 2 .. GA - ReadM SNP 0007.scaffold00024 1455425 1 A G - ReadM SNP 0007.scaffold00024 1455517 1 G T - ReadM SNP 0007.scaffold00024 1455571 1 T G - ReadM SNP 0007.scaffold00024 1455602 1 G T - ReadM SNP 0007.scaffold00024 1455660 1 T A - ReadM SNP 0007.scaffold00024 1455701 1 T C - ReadM SNP 0007.scaffold00024 1455707 1 A G - ReadM SNP 0007.scaffold00024 1455730 1 G T - ReadM SNP 0007.scaffold00024 1455758 1 T C - ReadM SNP 0007.scaffold00024 1455837 1 T C - ReadM SNP 0007.scaffold00024 1455946 1 G A - ReadM SNP 0007.scaffold00024 1455960 1 C T - ReadM SNP 0007.scaffold00024 1456009 1 T C - ReadM SNP 0007.scaffold00024 1456025 1 T A - ReadM SNP 0007.scaffold00024 1456101 1 G C - ReadM SNP 0007.scaffold00024 1456118 1 C A - ReadM SNP 0007.scaffold00024 1456206 1 C T - ReadM SNP 0007.scaffold00024 1456213 1 G C - ReadM SNP 0007.scaffold00024 1456283 1 T G - ReadM SNP 0007.scaffold00024 1456381 1 G A - ReadM SNP 0007.scaffold00024 1456515 1 T C - ReadM SNP 0007.scaffold00024 1456540 1 T A - Both SNP 0007.scaffold00024 1456600 1 C T scaffold12053 ReadM SNP 0007.scaffold00024 1456612 1 G A - ReadM SNP 0007.scaffold00024 1456758 1 A G - ReadM SNP 0007.scaffold00024 1456900 1 A T - ReadM SNP 0007.scaffold00024 1456919 2 CC GA - ReadM SNP 0007.scaffold00024 1456963 1 C T - ReadM SNP 0007.scaffold00024 1456992 1 T C - ReadM SNP 0007.scaffold00024 1457072 1 T C - ReadM SNP 0007.scaffold00024 1457079 1 T A - ReadM SNP 0007.scaffold00024 1457198 1 G C - ReadM SNP 0007.scaffold00024 1457323 1 C G - ReadM SNP 0007.scaffold00024 1457429 1 G A - ReadM SNP 0007.scaffold00024 1457433 1 G C - ReadM SNP 0007.scaffold00024 1457617 1 A C - ReadM SNP 0007.scaffold00024 1457639 1 A G - ReadM SNP 0007.scaffold00024 1457678 1 G A - ReadM SNP 0007.scaffold00024 1457873 1 G A - Both SNP 0007.scaffold00024 1458532 1 A T scaffold12053 ReadM SNP 0007.scaffold00024 1458745 1 T C - ReadM SNP 0007.scaffold00024 1458773 1 G A - ReadM SNP 0007.scaffold00024 1459012 1 G A - ReadM SNP 0007.scaffold00024 1459049 1 G A - ReadM SNP 0007.scaffold00024 1459082 1 G T - ReadM SNP 0007.scaffold00024 1459089 1 T A - ReadM SNP 0007.scaffold00024 1459139 1 T A - ReadM SNP 0007.scaffold00024 1459405 1 A G - ReadM SNP 0007.scaffold00024 1459649 1 G A - ReadM SNP 0007.scaffold00024 1459703 1 T C - ReadM SNP 0007.scaffold00024 1459843 1 C G - ReadM SNP 0007.scaffold00024 1459893 1 G A - ReadM SNP 0007.scaffold00024 1459943 1 A G - ScafM SNP 0007.scaffold00024 1460007 1 T A scaffold377 ScafM SNP 0007.scaffold00024 1460023 1 C A scaffold377 ScafM SNP 0007.scaffold00024 1460037 1 G A scaffold377 ScafM SNP 0007.scaffold00024 1460039 1 C T scaffold377 ScafM SNP 0007.scaffold00024 1460175 1 T G scaffold377 ScafM SNP 0007.scaffold00024 1460193 1 A G scaffold377 ReadM SNP 0007.scaffold00024 1460861 1 A G - ReadM SNP 0007.scaffold00024 1460873 1 C T - ReadM SNP 0007.scaffold00024 1460937 1 T A - ReadM SNP 0007.scaffold00024 1460987 1 G A - ReadM SNP 0007.scaffold00024 1461150 1 C T - ReadM SNP 0007.scaffold00024 1461573 1 T C - ReadM SNP 0007.scaffold00024 1461590 1 T C - ReadM SNP 0007.scaffold00024 1461624 1 T C - ReadM SNP 0007.scaffold00024 1461736 1 C T - ReadM SNP 0007.scaffold00024 1461784 1 A G - ReadM SNP 0007.scaffold00024 1461801 1 G T - ReadM SNP 0007.scaffold00024 1461821 1 A G - ReadM SNP 0007.scaffold00024 1461930 1 A G - ReadM SNP 0007.scaffold00024 1461957 1 A G - ReadM SNP 0007.scaffold00024 1461993 1 T C - ReadM SNP 0007.scaffold00024 1462075 1 T A - ReadM SNP 0007.scaffold00024 1462421 1 A G - ReadM SNP 0007.scaffold00024 1462520 1 A C - ReadM SNP 0007.scaffold00024 1462634 1 C T - ReadM SNP 0007.scaffold00024 1462675 1 A G - ReadM SNP 0007.scaffold00024 1462748 1 G T - ReadM SNP 0007.scaffold00024 1462778 1 T C - ReadM SNP 0007.scaffold00024 1462873 1 G A - ReadM SNP 0007.scaffold00024 1462971 1 T C - ReadM SNP 0007.scaffold00024 1463035 1 T G - ReadM SNP 0007.scaffold00024 1463199 1 T C - ReadM SNP 0007.scaffold00024 1463329 1 A T - ReadM SNP 0007.scaffold00024 1463351 1 T C - ReadM SNP 0007.scaffold00024 1463434 1 G T - ReadM SNP 0007.scaffold00024 1463514 1 A G - ReadM SNP 0007.scaffold00024 1463527 1 A T - ReadM SNP 0007.scaffold00024 1463534 1 G A - ReadM SNP 0007.scaffold00024 1463670 1 C T - ReadM SNP 0007.scaffold00024 1463675 1 C T - ReadM SNP 0007.scaffold00024 1463713 1 A G - ReadM SNP 0007.scaffold00024 1463787 1 T G - ReadM SNP 0007.scaffold00024 1463808 1 T C - ReadM SNP 0007.scaffold00024 1463869 1 A G - ReadM SNP 0007.scaffold00024 1463876 1 C T - ReadM SNP 0007.scaffold00024 1463904 1 A C - ReadM SNP 0007.scaffold00024 1464020 1 A C - ReadM SNP 0007.scaffold00024 1464097 1 G A - ReadM SNP 0007.scaffold00024 1464224 1 C A - ReadM SNP 0007.scaffold00024 1464238 1 A G - ReadM SNP 0007.scaffold00024 1464309 1 G A - ReadM SNP 0007.scaffold00024 1464331 1 T G - ReadM SNP 0007.scaffold00024 1464362 1 C A - ReadM SNP 0007.scaffold00024 1464468 1 T C - ReadM SNP 0007.scaffold00024 1464637 1 G A - ReadM SNP 0007.scaffold00024 1464646 1 A G - ReadM SNP 0007.scaffold00024 1464679 1 A G - ReadM SNP 0007.scaffold00024 1464717 1 A G - ReadM SNP 0007.scaffold00024 1464782 1 G C - ReadM SNP 0007.scaffold00024 1464798 1 C T - ReadM SNP 0007.scaffold00024 1464910 1 C G - ReadM SNP 0007.scaffold00024 1464932 1 T C - ReadM SNP 0007.scaffold00024 1464998 1 T C - ScafM INDEL 0007.scaffold00024 1465052 1 T . scaffold1975 ScafM SNP 0007.scaffold00024 1465059 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1465062 1 G A scaffold1975 Both SNP 0007.scaffold00024 1465082 1 T A scaffold1975 Both SNP 0007.scaffold00024 1465123 1 A G scaffold1975 ReadM SNP 0007.scaffold00024 1465155 1 T C - ReadM SNP 0007.scaffold00024 1465176 1 T G - ReadM SNP 0007.scaffold00024 1465179 1 C A - ReadM SNP 0007.scaffold00024 1465209 1 T C - ReadM SNP 0007.scaffold00024 1465270 1 G A - Both SNP 0007.scaffold00024 1465290 1 A G scaffold1975 Both SNP 0007.scaffold00024 1465356 1 C T scaffold1975 ReadM INDEL 0007.scaffold00024 1465513 1 T . - ReadM SNP 0007.scaffold00024 1465529 1 A T - ScafM SNP 0007.scaffold00024 1465638 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1465686 1 C T scaffold1975 Both SNP 0007.scaffold00024 1465713 1 T A scaffold1975 Both SNP 0007.scaffold00024 1465755 1 G T scaffold1975 Both INDEL 0007.scaffold00024 1465768 1 . A scaffold1975 ScafM INDEL 0007.scaffold00024 1465801 1 T . scaffold1975 ScafM SNP 0007.scaffold00024 1465813 1 A G scaffold1975 ScafM INDEL 0007.scaffold00024 1465868 1 . C scaffold1975 ScafM SNP 0007.scaffold00024 1465872 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1465905 1 A G scaffold1975 Both SNP 0007.scaffold00024 1465923 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1466010 2 CG GA scaffold1975 ScafM SNP 0007.scaffold00024 1466052 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1466066 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1466111 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1466157 1 G T scaffold1975 ScafM SNP 0007.scaffold00024 1466234 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1466241 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1466248 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1466259 1 C A scaffold1975 ScafM SNP 0007.scaffold00024 1466283 1 T C scaffold1975 ScafM INDEL 0007.scaffold00024 1466413 1 C . scaffold1975 Both SNP 0007.scaffold00024 1466458 1 G A scaffold1975 Both INDEL 0007.scaffold00024 1466499 1 . A scaffold1975 Both SNP 0007.scaffold00024 1466548 1 G T scaffold1975 ScafM SNP 0007.scaffold00024 1466619 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1466639 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1466663 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1466667 1 T G scaffold1975 Both SNP 0007.scaffold00024 1466705 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1466713 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1466757 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1466864 1 G A scaffold1975 Both SNP 0007.scaffold00024 1466929 1 T C scaffold1975 Both SNP 0007.scaffold00024 1467007 1 C T scaffold1975 ReadM SNP 0007.scaffold00024 1467090 1 C T - ReadM SNP 0007.scaffold00024 1467153 1 A C - ReadM SNP 0007.scaffold00024 1467198 1 C T - ReadM SNP 0007.scaffold00024 1467260 1 G A - ReadM INDEL 0007.scaffold00024 1467291 1 . T - ReadM SNP 0007.scaffold00024 1467395 1 A G - ReadM SNP 0007.scaffold00024 1467398 1 C G - ReadM SNP 0007.scaffold00024 1467464 1 C A - ReadM SNP 0007.scaffold00024 1467600 1 A G - ReadM SNP 0007.scaffold00024 1467633 1 C T - ReadM SNP 0007.scaffold00024 1467703 1 C T - ReadM SNP 0007.scaffold00024 1467717 1 G A - ReadM SNP 0007.scaffold00024 1467720 1 G T - ReadM SNP 0007.scaffold00024 1467774 1 C T - ReadM SNP 0007.scaffold00024 1467819 1 C G - ReadM SNP 0007.scaffold00024 1467870 1 A G - ReadM SNP 0007.scaffold00024 1467960 1 T C - ReadM SNP 0007.scaffold00024 1467963 1 T C - ReadM SNP 0007.scaffold00024 1467967 1 T C - ReadM SNP 0007.scaffold00024 1468066 1 C A - ReadM SNP 0007.scaffold00024 1468173 1 A G - ReadM SNP 0007.scaffold00024 1468225 1 C T - ReadM SNP 0007.scaffold00024 1468252 1 A T - ReadM SNP 0007.scaffold00024 1468285 1 T C - ReadM SNP 0007.scaffold00024 1468296 1 G A - ReadM SNP 0007.scaffold00024 1468334 1 A G - ReadM SNP 0007.scaffold00024 1468391 1 G T - ReadM SNP 0007.scaffold00024 1468445 1 G T - ReadM SNP 0007.scaffold00024 1468641 1 A C - ReadM SNP 0007.scaffold00024 1468863 1 A G - ReadM SNP 0007.scaffold00024 1468910 1 T C - ReadM SNP 0007.scaffold00024 1468937 1 T A - ReadM SNP 0007.scaffold00024 1468960 1 A G - ScafM SNP 0007.scaffold00024 1469906 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1469915 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1469923 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1469948 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1469964 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1469968 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1469971 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1469975 1 T A scaffold1975 Both SNP 0007.scaffold00024 1469996 1 G A scaffold1975 Both SNP 0007.scaffold00024 1470086 1 G A scaffold1975 Both SNP 0007.scaffold00024 1470189 1 C T scaffold1975 Both SNP 0007.scaffold00024 1470194 1 T C scaffold1975 Both SNP 0007.scaffold00024 1470267 1 T C scaffold1975 Both SNP 0007.scaffold00024 1470321 1 A C scaffold1975 Both SNP 0007.scaffold00024 1470372 1 G A scaffold1975 Both SNP 0007.scaffold00024 1470395 1 C T scaffold1975 Both SNP 0007.scaffold00024 1470403 1 C T scaffold1975 Both SNP 0007.scaffold00024 1470439 1 C T scaffold1975 Both SNP 0007.scaffold00024 1470454 1 G A scaffold1975 Both SNP 0007.scaffold00024 1470532 1 A T scaffold1975 Both SNP 0007.scaffold00024 1470539 1 A G scaffold1975 Both SNP 0007.scaffold00024 1470563 1 G C scaffold1975 Both SNP 0007.scaffold00024 1470583 1 A T scaffold1975 ReadM SNP 0007.scaffold00024 1470637 1 G A - ReadM SNP 0007.scaffold00024 1470766 1 G C - ReadM SNP 0007.scaffold00024 1470828 1 T C - ReadM SNP 0007.scaffold00024 1470875 1 T C - ReadM SNP 0007.scaffold00024 1470943 1 C T - ReadM INDEL 0007.scaffold00024 1470958 1 . C - ReadM SNP 0007.scaffold00024 1471060 1 C T - ReadM SNP 0007.scaffold00024 1471102 1 A T - ReadM SNP 0007.scaffold00024 1471223 1 C T - ReadM SNP 0007.scaffold00024 1471286 1 A G - ReadM SNP 0007.scaffold00024 1471354 1 C G - ReadM SNP 0007.scaffold00024 1471414 1 C T - ReadM SNP 0007.scaffold00024 1471452 1 A G - ReadM SNP 0007.scaffold00024 1471532 1 G A - ReadM SNP 0007.scaffold00024 1471536 1 C G - ReadM SNP 0007.scaffold00024 1471546 1 G A - ReadM SNP 0007.scaffold00024 1471631 1 G T - ReadM SNP 0007.scaffold00024 1471672 1 G A - ReadM SNP 0007.scaffold00024 1471815 1 A G - ReadM SNP 0007.scaffold00024 1472451 1 G T - ReadM SNP 0007.scaffold00024 1472505 1 G A - ReadM SNP 0007.scaffold00024 1473844 1 C T - ReadM SNP 0007.scaffold00024 1473934 1 C T - ReadM SNP 0007.scaffold00024 1474294 1 T C - ReadM SNP 0007.scaffold00024 1474393 1 G T - ReadM SNP 0007.scaffold00024 1474402 1 T A - ReadM SNP 0007.scaffold00024 1474416 1 A T - ReadM SNP 0007.scaffold00024 1474509 1 G C - ReadM SNP 0007.scaffold00024 1474651 1 G A - ReadM SNP 0007.scaffold00024 1474679 1 T C - ReadM SNP 0007.scaffold00024 1474717 1 A G - ReadM SNP 0007.scaffold00024 1474811 1 T C - ReadM SNP 0007.scaffold00024 1474893 1 G A - ReadM SNP 0007.scaffold00024 1474956 1 T G - ReadM SNP 0007.scaffold00024 1475008 1 A C - ReadM SNP 0007.scaffold00024 1475091 1 T G - ReadM SNP 0007.scaffold00024 1475142 1 G C - ReadM SNP 0007.scaffold00024 1475245 1 G T - ReadM SNP 0007.scaffold00024 1475256 1 A C - ReadM SNP 0007.scaffold00024 1475308 1 C A - ReadM SNP 0007.scaffold00024 1475384 1 G A - ReadM SNP 0007.scaffold00024 1475420 1 T C - ReadM SNP 0007.scaffold00024 1475492 1 G A - ReadM SNP 0007.scaffold00024 1475514 1 A G - ReadM SNP 0007.scaffold00024 1475576 1 A G - ReadM SNP 0007.scaffold00024 1475628 1 G A - ReadM SNP 0007.scaffold00024 1475637 1 G A - ReadM SNP 0007.scaffold00024 1475697 1 G A - ReadM SNP 0007.scaffold00024 1475708 1 G A - ReadM SNP 0007.scaffold00024 1475795 1 A C - ReadM SNP 0007.scaffold00024 1475810 1 G A - ReadM SNP 0007.scaffold00024 1476011 1 G T - ReadM SNP 0007.scaffold00024 1476027 1 C T - ReadM SNP 0007.scaffold00024 1476059 1 C G - ReadM SNP 0007.scaffold00024 1476096 1 T G - ReadM SNP 0007.scaffold00024 1476215 1 G A - ReadM SNP 0007.scaffold00024 1476242 1 T C - ReadM SNP 0007.scaffold00024 1476270 1 G A - ReadM INDEL 0007.scaffold00024 1476356 1 . G - ReadM SNP 0007.scaffold00024 1476411 1 T C - ReadM SNP 0007.scaffold00024 1476421 1 G A - ReadM INDEL 0007.scaffold00024 1476621 1 . G - ReadM SNP 0007.scaffold00024 1476661 1 G A - ReadM SNP 0007.scaffold00024 1476668 1 A T - ReadM SNP 0007.scaffold00024 1476737 1 C T - ReadM SNP 0007.scaffold00024 1476844 1 A T - ReadM SNP 0007.scaffold00024 1476901 1 A C - ReadM SNP 0007.scaffold00024 1476935 1 C T - ReadM SNP 0007.scaffold00024 1476974 1 A T - ReadM SNP 0007.scaffold00024 1477013 1 C T - ReadM SNP 0007.scaffold00024 1477157 1 A T - ReadM SNP 0007.scaffold00024 1477206 1 A T - ReadM SNP 0007.scaffold00024 1477252 1 T C - ReadM SNP 0007.scaffold00024 1477270 1 A G - ReadM SNP 0007.scaffold00024 1477276 1 T C - ReadM SNP 0007.scaffold00024 1477327 2 GG CA - ReadM SNP 0007.scaffold00024 1477379 1 T C - ReadM SNP 0007.scaffold00024 1477407 1 C T - ReadM SNP 0007.scaffold00024 1477450 1 C G - ReadM SNP 0007.scaffold00024 1477474 1 C G - ReadM SNP 0007.scaffold00024 1477501 1 A G - ReadM SNP 0007.scaffold00024 1477588 1 A G - ReadM SNP 0007.scaffold00024 1477628 1 G A - ReadM SNP 0007.scaffold00024 1477763 1 C A - ReadM SNP 0007.scaffold00024 1477772 1 G A - ReadM SNP 0007.scaffold00024 1477815 1 G A - ReadM SNP 0007.scaffold00024 1477825 1 C T - ReadM SNP 0007.scaffold00024 1477845 1 G A - ReadM SNP 0007.scaffold00024 1477874 1 A G - ReadM SNP 0007.scaffold00024 1477933 1 T C - ReadM SNP 0007.scaffold00024 1477987 1 C T - ReadM SNP 0007.scaffold00024 1478056 1 C T - ReadM SNP 0007.scaffold00024 1478201 1 G A - ReadM SNP 0007.scaffold00024 1478256 1 C T - ReadM SNP 0007.scaffold00024 1478444 1 T G - ReadM SNP 0007.scaffold00024 1478485 1 G A - ReadM SNP 0007.scaffold00024 1478520 1 C G - ReadM SNP 0007.scaffold00024 1478595 1 A G - ReadM SNP 0007.scaffold00024 1478624 1 G T - ReadM SNP 0007.scaffold00024 1478711 1 G T - ReadM SNP 0007.scaffold00024 1478746 1 A G - ReadM SNP 0007.scaffold00024 1478831 1 A C - ReadM SNP 0007.scaffold00024 1478841 1 G A - ReadM SNP 0007.scaffold00024 1478894 1 T C - ReadM SNP 0007.scaffold00024 1478910 1 C G - ReadM SNP 0007.scaffold00024 1478929 1 A G - ReadM SNP 0007.scaffold00024 1478961 1 C A - ReadM SNP 0007.scaffold00024 1479029 2 GG AT - ReadM SNP 0007.scaffold00024 1479106 1 T C - ReadM SNP 0007.scaffold00024 1479165 1 G A - ReadM SNP 0007.scaffold00024 1479305 1 A G - ReadM SNP 0007.scaffold00024 1479381 1 A C - ReadM SNP 0007.scaffold00024 1479388 1 G A - ReadM SNP 0007.scaffold00024 1479520 1 A C - ReadM SNP 0007.scaffold00024 1479527 1 C T - ReadM SNP 0007.scaffold00024 1479536 1 G C - ReadM SNP 0007.scaffold00024 1479575 1 T C - ReadM SNP 0007.scaffold00024 1479654 1 C T - ReadM SNP 0007.scaffold00024 1479721 1 G A - ReadM SNP 0007.scaffold00024 1479741 1 G A - ReadM SNP 0007.scaffold00024 1479879 1 A T - ReadM SNP 0007.scaffold00024 1479899 1 C T - ReadM SNP 0007.scaffold00024 1479903 1 C G - ReadM SNP 0007.scaffold00024 1480059 1 G A - ReadM SNP 0007.scaffold00024 1480089 2 GA CC - ReadM SNP 0007.scaffold00024 1480144 1 A T - ReadM SNP 0007.scaffold00024 1480177 1 A G - ReadM SNP 0007.scaffold00024 1480438 1 C A - ReadM SNP 0007.scaffold00024 1480453 1 C A - ReadM SNP 0007.scaffold00024 1480493 1 G C - ReadM SNP 0007.scaffold00024 1480584 1 T C - ReadM SNP 0007.scaffold00024 1480613 1 C T - ReadM SNP 0007.scaffold00024 1480635 1 G A - ReadM SNP 0007.scaffold00024 1480839 1 G A - ReadM SNP 0007.scaffold00024 1480937 1 C T - ReadM SNP 0007.scaffold00024 1481015 1 T C - ReadM SNP 0007.scaffold00024 1481051 1 G C - ReadM INDEL 0007.scaffold00024 1481058 1 . T - ReadM SNP 0007.scaffold00024 1481089 1 G A - ReadM SNP 0007.scaffold00024 1481117 1 T C - ReadM SNP 0007.scaffold00024 1481121 1 A G - ReadM SNP 0007.scaffold00024 1481159 1 C A - ReadM SNP 0007.scaffold00024 1481169 1 T C - ScafM INDEL 0007.scaffold00024 1481333 7 ....... AATTAGA scaffold1975 ScafM SNP 0007.scaffold00024 1481338 1 C A scaffold1975 Both SNP 0007.scaffold00024 1481470 1 G A scaffold1975 Both SNP 0007.scaffold00024 1481664 1 C T scaffold1975 Both SNP 0007.scaffold00024 1482119 1 A C scaffold1975 Both SNP 0007.scaffold00024 1482164 1 T C scaffold1975 Both SNP 0007.scaffold00024 1482178 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1482220 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1482421 1 T C - Both SNP 0007.scaffold00024 1482684 1 C A scaffold1975 ReadM SNP 0007.scaffold00024 1482826 1 A C - ReadM SNP 0007.scaffold00024 1482952 1 G A - ScafM INDEL 0007.scaffold00024 1482987 51 TTTGTTGACTTGAAAATTGATGTTGAAAATAATCCAACAACATTTCTATTT ................................................... scaffold1975 ScafM INDEL 0007.scaffold00024 1483161 19 TTTACGTATCATATCTTTC ................... scaffold1975 Both SNP 0007.scaffold00024 1483225 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1483258 1 T C - ReadM INDEL 0007.scaffold00024 1483321 1 . G - ReadM SNP 0007.scaffold00024 1483333 1 G A - Both SNP 0007.scaffold00024 1483474 1 A G scaffold1975 Both SNP 0007.scaffold00024 1483508 1 C G scaffold1975 Both SNP 0007.scaffold00024 1483526 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1483657 1 T C - ReadM SNP 0007.scaffold00024 1483744 1 G A - ReadM SNP 0007.scaffold00024 1483746 1 T C - ReadM SNP 0007.scaffold00024 1483792 1 T C - ReadM SNP 0007.scaffold00024 1484182 1 G A - ReadM SNP 0007.scaffold00024 1484227 1 G A - ReadM SNP 0007.scaffold00024 1484249 1 A T - ReadM SNP 0007.scaffold00024 1484608 1 A G - ReadM SNP 0007.scaffold00024 1484670 1 A T - ReadM INDEL 0007.scaffold00024 1484720 1 A . - ReadM SNP 0007.scaffold00024 1484839 1 A T - ReadM SNP 0007.scaffold00024 1484849 1 G A - ScafM SNP 0007.scaffold00024 1485025 1 A T scaffold1975 ReadM SNP 0007.scaffold00024 1485124 1 T G - ReadM SNP 0007.scaffold00024 1485182 1 T A - Both SNP 0007.scaffold00024 1485271 1 G T scaffold1975 Both SNP 0007.scaffold00024 1485293 1 G A scaffold1975 Both SNP 0007.scaffold00024 1485362 1 C T scaffold1975 Both SNP 0007.scaffold00024 1485369 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1485399 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1485403 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1485431 1 C T scaffold1975 Both SNP 0007.scaffold00024 1485448 1 C T scaffold1975 ReadM INDEL 0007.scaffold00024 1485466 1 T . - Both SNP 0007.scaffold00024 1485604 1 T C scaffold1975 Both SNP 0007.scaffold00024 1485636 1 C T scaffold1975 Both SNP 0007.scaffold00024 1485671 1 G T scaffold1975 ReadM SNP 0007.scaffold00024 1485756 1 T C - ReadM SNP 0007.scaffold00024 1485765 1 A T - Both SNP 0007.scaffold00024 1485846 1 T C scaffold1975 Both SNP 0007.scaffold00024 1485866 1 G A scaffold1975 Both SNP 0007.scaffold00024 1485886 1 G T scaffold1975 Both SNP 0007.scaffold00024 1485934 1 G A scaffold1975 Both SNP 0007.scaffold00024 1485996 1 C T scaffold1975 Both SNP 0007.scaffold00024 1486014 1 G T scaffold1975 ScafM SNP 0007.scaffold00024 1486035 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1486042 1 G T scaffold1975 ScafM SNP 0007.scaffold00024 1486064 1 G C scaffold1975 ScafM SNP 0007.scaffold00024 1486072 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1486079 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1486239 1 A C scaffold1975 ScafM SNP 0007.scaffold00024 1486245 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1486275 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1486342 1 A C scaffold1975 ReadM SNP 0007.scaffold00024 1487173 1 A T - ReadM SNP 0007.scaffold00024 1487363 1 A T - ReadM SNP 0007.scaffold00024 1487372 1 A G - ReadM SNP 0007.scaffold00024 1487389 1 T A - Both SNP 0007.scaffold00024 1487425 1 A C scaffold1975 Both SNP 0007.scaffold00024 1487466 1 C A scaffold1975 Both INDEL 0007.scaffold00024 1487565 3 CTT ... scaffold1975 ScafM INDEL 0007.scaffold00024 1487633 4 GTAC .... scaffold1975 ReadM SNP 0007.scaffold00024 1487689 1 A G - ReadM INDEL 0007.scaffold00024 1487706 1 . A - ReadM SNP 0007.scaffold00024 1487801 1 C A - ReadM SNP 0007.scaffold00024 1488022 1 G A - ReadM SNP 0007.scaffold00024 1488034 1 T A - Both SNP 0007.scaffold00024 1488104 1 C A scaffold1975 Both SNP 0007.scaffold00024 1488113 1 C T scaffold1975 ReadM SNP 0007.scaffold00024 1488174 1 G C - ReadM SNP 0007.scaffold00024 1488245 1 C T - ReadM SNP 0007.scaffold00024 1488495 1 G A - ScafM SNP 0007.scaffold00024 1492830 1 C A scaffold1975 ScafM SNP 0007.scaffold00024 1492832 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1492865 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1492874 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1492890 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1493180 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1493201 1 T A scaffold1975 ReadM SNP 0007.scaffold00024 1493266 1 C G - ReadM SNP 0007.scaffold00024 1493391 1 T G - ReadM INDEL 0007.scaffold00024 1493395 1 G . - ReadM SNP 0007.scaffold00024 1493478 1 A C - ReadM SNP 0007.scaffold00024 1493481 1 C T - ReadM SNP 0007.scaffold00024 1493602 1 T C - ReadM SNP 0007.scaffold00024 1493606 1 C T - ReadM SNP 0007.scaffold00024 1493651 1 C T - Both SNP 0007.scaffold00024 1493835 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1493886 1 T A - ReadM SNP 0007.scaffold00024 1494298 1 G A - ReadM SNP 0007.scaffold00024 1494315 1 G A - ReadM SNP 0007.scaffold00024 1494336 1 T C - ReadM SNP 0007.scaffold00024 1494817 1 T A - ReadM SNP 0007.scaffold00024 1494841 1 A G - ReadM SNP 0007.scaffold00024 1494855 1 A G - ReadM SNP 0007.scaffold00024 1494886 1 G T - ReadM SNP 0007.scaffold00024 1494917 1 C T - ReadM SNP 0007.scaffold00024 1495014 1 C A - ReadM SNP 0007.scaffold00024 1495100 1 G T - ReadM SNP 0007.scaffold00024 1495152 1 A G - ReadM SNP 0007.scaffold00024 1495154 1 C T - ReadM SNP 0007.scaffold00024 1495283 1 T G - ReadM SNP 0007.scaffold00024 1495306 1 C A - ReadM SNP 0007.scaffold00024 1495311 1 G T - ReadM SNP 0007.scaffold00024 1495380 1 A G - ReadM SNP 0007.scaffold00024 1495402 1 G A - ReadM SNP 0007.scaffold00024 1495441 1 T C - ReadM SNP 0007.scaffold00024 1495473 1 T G - ReadM SNP 0007.scaffold00024 1495534 1 C A - ReadM SNP 0007.scaffold00024 1495568 1 A T - ReadM SNP 0007.scaffold00024 1495614 1 A G - ReadM SNP 0007.scaffold00024 1495652 1 A G - ReadM SNP 0007.scaffold00024 1495753 1 A G - ReadM SNP 0007.scaffold00024 1495831 1 T C - ReadM SNP 0007.scaffold00024 1495902 1 G A - ReadM SNP 0007.scaffold00024 1495984 1 G A - ReadM SNP 0007.scaffold00024 1496058 1 C A - ReadM SNP 0007.scaffold00024 1496340 1 C T - ReadM SNP 0007.scaffold00024 1496402 1 A G - ReadM SNP 0007.scaffold00024 1496430 1 A C - ReadM SNP 0007.scaffold00024 1496497 1 A G - ReadM SNP 0007.scaffold00024 1496510 1 C G - ReadM SNP 0007.scaffold00024 1496586 1 G A - ReadM SNP 0007.scaffold00024 1496773 1 G A - ReadM SNP 0007.scaffold00024 1496781 1 G A - ReadM SNP 0007.scaffold00024 1496794 1 T G - ReadM SNP 0007.scaffold00024 1496834 1 A C - ReadM SNP 0007.scaffold00024 1496907 1 T G - ReadM SNP 0007.scaffold00024 1496984 1 T C - ReadM SNP 0007.scaffold00024 1497090 1 C T - ReadM SNP 0007.scaffold00024 1497137 1 C A - ReadM INDEL 0007.scaffold00024 1497186 1 T . - ReadM SNP 0007.scaffold00024 1497244 1 T C - ReadM SNP 0007.scaffold00024 1497419 1 T C - ReadM SNP 0007.scaffold00024 1497465 1 T C - ReadM SNP 0007.scaffold00024 1497485 1 T C - ReadM SNP 0007.scaffold00024 1497529 1 A T - ReadM SNP 0007.scaffold00024 1497706 1 G A - ReadM SNP 0007.scaffold00024 1497844 1 A T - Both SNP 0007.scaffold00024 1497849 1 C G scaffold1975 Both SNP 0007.scaffold00024 1497876 1 T C scaffold1975 Both SNP 0007.scaffold00024 1497958 1 G T scaffold1975 ReadM SNP 0007.scaffold00024 1498008 1 C T - ReadM SNP 0007.scaffold00024 1498247 1 G A - ReadM SNP 0007.scaffold00024 1498263 1 C T - ScafM SNP 0007.scaffold00024 1498441 1 C A scaffold1975 ScafM SNP 0007.scaffold00024 1498451 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1498455 1 A C scaffold1975 Both SNP 0007.scaffold00024 1498469 1 G C scaffold1975 Both SNP 0007.scaffold00024 1498567 1 T C scaffold1975 Both SNP 0007.scaffold00024 1498577 1 C G scaffold1975 Both SNP 0007.scaffold00024 1498740 1 C T scaffold1975 Both SNP 0007.scaffold00024 1498828 1 C T scaffold1975 Both SNP 0007.scaffold00024 1498881 1 T A scaffold1975 Both SNP 0007.scaffold00024 1498970 1 T A scaffold1975 Both SNP 0007.scaffold00024 1498977 1 T C scaffold1975 Both SNP 0007.scaffold00024 1499004 1 A G scaffold1975 Both SNP 0007.scaffold00024 1499046 1 T G scaffold1975 Both INDEL 0007.scaffold00024 1499065 1 T . scaffold1975 Both SNP 0007.scaffold00024 1499076 1 A C scaffold1975 Both SNP 0007.scaffold00024 1499135 1 A G scaffold1975 ReadM INDEL 0007.scaffold00024 1499162 2 AT .. - ScafM SNP 0007.scaffold00024 1499162 1 A T scaffold1975 ReadM SNP 0007.scaffold00024 1499200 1 T C - ReadM SNP 0007.scaffold00024 1499418 1 C G - ReadM SNP 0007.scaffold00024 1499432 1 G A - ReadM INDEL 0007.scaffold00024 1499469 1 . A - ReadM SNP 0007.scaffold00024 1499574 1 G T - ReadM SNP 0007.scaffold00024 1499601 1 A T - ScafM SNP 0007.scaffold00024 1499645 2 GG AT scaffold1975 ReadM INDEL 0007.scaffold00024 1499765 1 A . - ReadM SNP 0007.scaffold00024 1499775 1 A G - ReadM SNP 0007.scaffold00024 1499811 1 C T - ReadM SNP 0007.scaffold00024 1499813 1 A G - ReadM SNP 0007.scaffold00024 1499867 1 T C - Both SNP 0007.scaffold00024 1499929 1 G C scaffold1975 Both SNP 0007.scaffold00024 1499967 1 C T scaffold1975 Both SNP 0007.scaffold00024 1499983 1 T C scaffold1975 ScafM INDEL 0007.scaffold00024 1500041 4 .... TTTC scaffold1975 Both SNP 0007.scaffold00024 1500118 1 A T scaffold1975 Both SNP 0007.scaffold00024 1500132 1 G A scaffold1975 Both SNP 0007.scaffold00024 1500212 1 T C scaffold1975 Both SNP 0007.scaffold00024 1500236 1 G A scaffold1975 ScafM INDEL 0007.scaffold00024 1500299 1 G . scaffold1975 ScafM INDEL 0007.scaffold00024 1500304 1 . C scaffold1975 ReadM INDEL 0007.scaffold00024 1500420 1 . G - Both INDEL 0007.scaffold00024 1500477 2 .. TT scaffold1975 ScafM INDEL 0007.scaffold00024 1500534 4 .... TTTT scaffold1975 ScafM SNP 0007.scaffold00024 1500541 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1500545 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1500549 1 G C scaffold1975 ScafM SNP 0007.scaffold00024 1500609 1 G A scaffold1975 ScafM INDEL 0007.scaffold00024 1500616 2 TT .. scaffold1975 ScafM SNP 0007.scaffold00024 1500638 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1500668 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1500675 1 A G scaffold1975 ReadM SNP 0007.scaffold00024 1500853 1 T C - ReadM INDEL 0007.scaffold00024 1500909 1 A . - Both SNP 0007.scaffold00024 1500949 1 C A scaffold1975 ScafM SNP 0007.scaffold00024 1500980 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1500987 2 GT TC scaffold1975 Both SNP 0007.scaffold00024 1501036 1 T C scaffold1975 Both SNP 0007.scaffold00024 1501052 1 C A scaffold1975 Both SNP 0007.scaffold00024 1501078 1 G C scaffold1975 ScafM INDEL 0007.scaffold00024 1501670 1 . A scaffold1975 ScafM SNP 0007.scaffold00024 1502285 1 G A scaffold1975 ScafM INDEL 0007.scaffold00024 1502375 1 . G scaffold1975 ReadM INDEL 0007.scaffold00024 1502490 2 AT .. - ReadM SNP 0007.scaffold00024 1502534 1 C G - ReadM SNP 0007.scaffold00024 1502572 1 A C - Both SNP 0007.scaffold00024 1502737 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1502799 1 T C - ReadM SNP 0007.scaffold00024 1502827 1 A G - ReadM SNP 0007.scaffold00024 1502869 1 G A - Both SNP 0007.scaffold00024 1503100 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1503147 1 A G scaffold1975 ScafM INDEL 0007.scaffold00024 1503175 8 ........ AGTCAGAG scaffold1975 Both SNP 0007.scaffold00024 1503191 1 G A scaffold1975 Both SNP 0007.scaffold00024 1503215 1 A G scaffold1975 Both SNP 0007.scaffold00024 1503267 1 T C scaffold1975 ReadM INDEL 0007.scaffold00024 1503347 1 T . - Both SNP 0007.scaffold00024 1503409 1 T G scaffold1975 Both SNP 0007.scaffold00024 1503542 1 T C scaffold1975 Both SNP 0007.scaffold00024 1503611 1 A T scaffold1975 Both INDEL 0007.scaffold00024 1503676 1 T . scaffold1975 Both SNP 0007.scaffold00024 1503758 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1503870 1 T C - Both SNP 0007.scaffold00024 1503908 1 T A scaffold1975 ReadM SNP 0007.scaffold00024 1504030 1 A T - ReadM SNP 0007.scaffold00024 1504047 1 G C - ReadM SNP 0007.scaffold00024 1504232 1 C T - ReadM SNP 0007.scaffold00024 1504260 1 C T - ReadM SNP 0007.scaffold00024 1504263 1 C G - ReadM SNP 0007.scaffold00024 1504396 1 G C - ReadM SNP 0007.scaffold00024 1504420 1 T C - ReadM SNP 0007.scaffold00024 1504522 1 G A - ReadM SNP 0007.scaffold00024 1504525 1 A G - ReadM INDEL 0007.scaffold00024 1504618 1 . C - ReadM SNP 0007.scaffold00024 1504626 1 G A - ReadM SNP 0007.scaffold00024 1504675 1 C G - ReadM SNP 0007.scaffold00024 1504677 1 C A - ReadM SNP 0007.scaffold00024 1504750 1 G C - ReadM INDEL 0007.scaffold00024 1504757 1 T . - ReadM SNP 0007.scaffold00024 1504770 1 A C - ReadM SNP 0007.scaffold00024 1504794 1 C T - ReadM SNP 0007.scaffold00024 1504841 1 G A - ScafM SNP 0007.scaffold00024 1504924 1 A G scaffold1975 ScafM INDEL 0007.scaffold00024 1504933 2 .. AG scaffold1975 ScafM INDEL 0007.scaffold00024 1504935 1 . G scaffold1975 Both SNP 0007.scaffold00024 1504989 1 T G scaffold1975 ReadM SNP 0007.scaffold00024 1505076 1 T G - ReadM SNP 0007.scaffold00024 1505121 1 A G - ReadM SNP 0007.scaffold00024 1505570 1 A G - ReadM SNP 0007.scaffold00024 1505622 1 G A - ReadM SNP 0007.scaffold00024 1505682 1 C A - ReadM SNP 0007.scaffold00024 1505693 1 A G - ReadM SNP 0007.scaffold00024 1505702 1 T G - ReadM SNP 0007.scaffold00024 1505836 1 T C - ReadM SNP 0007.scaffold00024 1505956 2 CA TG - ReadM SNP 0007.scaffold00024 1506199 1 G C - ReadM SNP 0007.scaffold00024 1506236 1 C T - ReadM SNP 0007.scaffold00024 1506316 1 C A - ReadM SNP 0007.scaffold00024 1506392 1 T C - ReadM SNP 0007.scaffold00024 1506521 1 A G - ReadM SNP 0007.scaffold00024 1506562 1 T C - ReadM SNP 0007.scaffold00024 1506590 1 A C - ReadM SNP 0007.scaffold00024 1506674 1 C A - ReadM SNP 0007.scaffold00024 1506721 1 G A - ReadM SNP 0007.scaffold00024 1506783 1 T C - ReadM SNP 0007.scaffold00024 1506799 1 G T - ReadM SNP 0007.scaffold00024 1506835 1 C T - ReadM SNP 0007.scaffold00024 1506850 1 T C - ReadM SNP 0007.scaffold00024 1506933 1 T C - ReadM SNP 0007.scaffold00024 1507050 1 G C - ReadM SNP 0007.scaffold00024 1507094 1 A G - ReadM SNP 0007.scaffold00024 1507169 1 G A - ReadM SNP 0007.scaffold00024 1507183 1 T C - ReadM SNP 0007.scaffold00024 1507316 1 C T - ReadM SNP 0007.scaffold00024 1507386 1 A G - ReadM SNP 0007.scaffold00024 1507420 1 T C - ReadM SNP 0007.scaffold00024 1507438 1 G T - ReadM SNP 0007.scaffold00024 1507516 1 C T - ReadM SNP 0007.scaffold00024 1507533 1 C T - ReadM SNP 0007.scaffold00024 1507535 1 C T - ReadM SNP 0007.scaffold00024 1507660 1 G T - ReadM SNP 0007.scaffold00024 1507674 1 G T - ReadM SNP 0007.scaffold00024 1507735 1 T C - ReadM SNP 0007.scaffold00024 1507757 1 A C - ReadM SNP 0007.scaffold00024 1507784 1 G A - ReadM INDEL 0007.scaffold00024 1507811 1 . A - ReadM SNP 0007.scaffold00024 1507854 1 G C - ReadM SNP 0007.scaffold00024 1507910 1 T C - ReadM SNP 0007.scaffold00024 1508125 1 T A - ReadM SNP 0007.scaffold00024 1508152 1 T C - ReadM SNP 0007.scaffold00024 1508282 1 G C - ReadM SNP 0007.scaffold00024 1508321 1 G A - ReadM SNP 0007.scaffold00024 1508345 1 T C - ReadM SNP 0007.scaffold00024 1508414 1 G C - ReadM SNP 0007.scaffold00024 1508421 1 C T - ReadM SNP 0007.scaffold00024 1508631 1 G C - ReadM SNP 0007.scaffold00024 1508697 1 A G - ReadM SNP 0007.scaffold00024 1508752 1 T C - ReadM SNP 0007.scaffold00024 1508788 1 G T - ReadM SNP 0007.scaffold00024 1508790 1 C A - ReadM SNP 0007.scaffold00024 1508957 1 A G - ReadM SNP 0007.scaffold00024 1509099 1 T A - ReadM SNP 0007.scaffold00024 1509106 1 A G - ReadM SNP 0007.scaffold00024 1509144 1 G A - ReadM SNP 0007.scaffold00024 1509396 1 A T - ReadM SNP 0007.scaffold00024 1509403 1 A G - ReadM SNP 0007.scaffold00024 1509446 1 A C - ReadM SNP 0007.scaffold00024 1509499 1 C T - ReadM SNP 0007.scaffold00024 1509525 1 G A - ReadM SNP 0007.scaffold00024 1509565 1 C T - ReadM SNP 0007.scaffold00024 1509627 1 G T - ReadM SNP 0007.scaffold00024 1509976 1 A G - ReadM SNP 0007.scaffold00024 1510024 1 A G - ReadM SNP 0007.scaffold00024 1510035 1 C T - ReadM SNP 0007.scaffold00024 1510059 1 A G - ReadM SNP 0007.scaffold00024 1510109 1 G A - ReadM SNP 0007.scaffold00024 1510217 1 C T - ReadM SNP 0007.scaffold00024 1510333 1 C A - ReadM SNP 0007.scaffold00024 1510345 1 A G - ReadM SNP 0007.scaffold00024 1510390 1 T C - ReadM SNP 0007.scaffold00024 1510418 1 A T - ReadM SNP 0007.scaffold00024 1510476 1 C T - ReadM SNP 0007.scaffold00024 1510564 1 A G - ReadM SNP 0007.scaffold00024 1510566 1 A G - ReadM SNP 0007.scaffold00024 1510657 1 C T - ReadM SNP 0007.scaffold00024 1510709 1 T G - ReadM SNP 0007.scaffold00024 1510715 1 T A - ReadM SNP 0007.scaffold00024 1510767 1 A G - ReadM SNP 0007.scaffold00024 1510831 1 A G - ReadM SNP 0007.scaffold00024 1510835 1 T C - ReadM SNP 0007.scaffold00024 1510850 1 C T - ReadM SNP 0007.scaffold00024 1510926 1 A C - ReadM SNP 0007.scaffold00024 1511166 1 T C - ReadM SNP 0007.scaffold00024 1511191 1 T C - ReadM SNP 0007.scaffold00024 1511266 1 C T - ReadM SNP 0007.scaffold00024 1511305 1 C T - ReadM SNP 0007.scaffold00024 1511361 1 A C - ReadM SNP 0007.scaffold00024 1511374 1 A T - ReadM SNP 0007.scaffold00024 1511380 1 A G - ReadM SNP 0007.scaffold00024 1511431 1 G A - ReadM SNP 0007.scaffold00024 1511437 1 C T - ReadM SNP 0007.scaffold00024 1511446 1 T C - ReadM SNP 0007.scaffold00024 1511511 1 C T - ReadM SNP 0007.scaffold00024 1511637 1 A G - ReadM SNP 0007.scaffold00024 1511682 1 G A - ReadM SNP 0007.scaffold00024 1511735 1 T C - ReadM SNP 0007.scaffold00024 1511764 1 G T - ReadM SNP 0007.scaffold00024 1511823 1 A T - ReadM SNP 0007.scaffold00024 1511869 1 G A - ReadM SNP 0007.scaffold00024 1511881 1 T G - ReadM SNP 0007.scaffold00024 1511942 1 T G - ReadM SNP 0007.scaffold00024 1512040 1 A G - ReadM SNP 0007.scaffold00024 1512066 1 G T - ReadM SNP 0007.scaffold00024 1512185 1 C T - ReadM SNP 0007.scaffold00024 1512428 1 A G - ReadM SNP 0007.scaffold00024 1512451 1 T C - ReadM SNP 0007.scaffold00024 1512457 1 C T - ReadM SNP 0007.scaffold00024 1512498 1 C T - ReadM SNP 0007.scaffold00024 1512569 1 G T - ReadM SNP 0007.scaffold00024 1512844 1 T C - ReadM SNP 0007.scaffold00024 1512859 1 T C - ReadM SNP 0007.scaffold00024 1512902 1 A C - ReadM SNP 0007.scaffold00024 1512962 1 A G - ReadM SNP 0007.scaffold00024 1513119 1 C T - ReadM SNP 0007.scaffold00024 1513230 1 T C - ReadM SNP 0007.scaffold00024 1513234 1 T C - ReadM SNP 0007.scaffold00024 1513320 1 A G - ReadM SNP 0007.scaffold00024 1513322 1 T A - ReadM SNP 0007.scaffold00024 1513427 1 G A - ReadM SNP 0007.scaffold00024 1513510 1 C T - ReadM INDEL 0007.scaffold00024 1513554 1 T . - ReadM SNP 0007.scaffold00024 1513713 1 G A - ReadM SNP 0007.scaffold00024 1513830 1 G A - ReadM SNP 0007.scaffold00024 1514008 1 T C - ReadM SNP 0007.scaffold00024 1514043 1 G A - ReadM SNP 0007.scaffold00024 1514060 1 T C - ReadM SNP 0007.scaffold00024 1514149 1 T C - ReadM SNP 0007.scaffold00024 1514217 1 T G - ReadM SNP 0007.scaffold00024 1514381 1 A C - ReadM SNP 0007.scaffold00024 1514417 1 C T - ReadM SNP 0007.scaffold00024 1514428 1 T C - Both SNP 0007.scaffold00024 1514569 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1514698 1 T A - ReadM SNP 0007.scaffold00024 1514738 1 T G - ReadM SNP 0007.scaffold00024 1514741 1 C T - ReadM SNP 0007.scaffold00024 1514775 1 T C - ReadM SNP 0007.scaffold00024 1514829 1 C T - ReadM SNP 0007.scaffold00024 1514880 1 A G - ReadM SNP 0007.scaffold00024 1514936 1 T G - ReadM SNP 0007.scaffold00024 1515017 1 A C - ReadM SNP 0007.scaffold00024 1515050 1 T C - ReadM SNP 0007.scaffold00024 1515109 1 A G - ReadM SNP 0007.scaffold00024 1515196 1 G A - ReadM SNP 0007.scaffold00024 1515207 1 T C - ReadM SNP 0007.scaffold00024 1515235 1 T C - ReadM SNP 0007.scaffold00024 1515269 1 A G - ReadM SNP 0007.scaffold00024 1515408 1 G A - ReadM SNP 0007.scaffold00024 1515488 1 T C - Both SNP 0007.scaffold00024 1515714 1 T C scaffold1975 Both INDEL 0007.scaffold00024 1515717 1 . T scaffold1975 ScafM SNP 0007.scaffold00024 1515722 1 A T scaffold1975 ReadM SNP 0007.scaffold00024 1515763 1 T C - ReadM SNP 0007.scaffold00024 1515795 1 A G - ReadM SNP 0007.scaffold00024 1515822 1 G A - ReadM INDEL 0007.scaffold00024 1515857 2 .. AC - ScafM INDEL 0007.scaffold00024 1515933 2 AA .. scaffold1975 Both SNP 0007.scaffold00024 1515964 1 G C scaffold1975 ScafM SNP 0007.scaffold00024 1515982 1 A T scaffold1975 Both SNP 0007.scaffold00024 1516019 1 G A scaffold1975 Both SNP 0007.scaffold00024 1516050 1 A T scaffold1975 ReadM SNP 0007.scaffold00024 1516112 1 A T - ReadM SNP 0007.scaffold00024 1516283 1 G A - ReadM SNP 0007.scaffold00024 1516297 1 T C - ReadM SNP 0007.scaffold00024 1516318 1 C A - ReadM SNP 0007.scaffold00024 1516411 1 A T - ReadM SNP 0007.scaffold00024 1516793 1 C T - ReadM SNP 0007.scaffold00024 1516808 1 T C - ReadM SNP 0007.scaffold00024 1516932 1 T C - ReadM SNP 0007.scaffold00024 1516951 1 T C - ReadM SNP 0007.scaffold00024 1516983 1 G A - ReadM SNP 0007.scaffold00024 1517882 1 C A - ReadM SNP 0007.scaffold00024 1519851 1 G A - ReadM SNP 0007.scaffold00024 1519858 1 C A - ReadM SNP 0007.scaffold00024 1519894 1 C T - ReadM SNP 0007.scaffold00024 1520125 1 G A - ReadM SNP 0007.scaffold00024 1520169 1 G C - ReadM SNP 0007.scaffold00024 1520175 1 C G - ReadM SNP 0007.scaffold00024 1520239 1 A C - ReadM SNP 0007.scaffold00024 1522355 1 A G - ReadM SNP 0007.scaffold00024 1522392 1 C T - ReadM SNP 0007.scaffold00024 1522402 1 C T - ReadM SNP 0007.scaffold00024 1522589 1 A C - ReadM INDEL 0007.scaffold00024 1522635 1 A . - ReadM SNP 0007.scaffold00024 1522787 1 A G - ReadM SNP 0007.scaffold00024 1522826 1 T C - ReadM SNP 0007.scaffold00024 1522879 1 T G - ReadM SNP 0007.scaffold00024 1522894 1 A G - ReadM SNP 0007.scaffold00024 1522935 1 G T - ReadM SNP 0007.scaffold00024 1523004 1 T C - ReadM SNP 0007.scaffold00024 1523006 1 T C - ReadM SNP 0007.scaffold00024 1523063 1 A G - ReadM SNP 0007.scaffold00024 1523098 1 A G - ReadM SNP 0007.scaffold00024 1523131 1 A G - ReadM SNP 0007.scaffold00024 1523292 1 A T - ReadM SNP 0007.scaffold00024 1523324 1 T C - ReadM SNP 0007.scaffold00024 1523511 1 T G - ScafM SNP 0007.scaffold00024 1525559 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1525609 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1525745 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1525776 1 G C scaffold1975 ScafM SNP 0007.scaffold00024 1525786 1 A G scaffold1975 ReadM SNP 0007.scaffold00024 1527319 1 T A - ReadM SNP 0007.scaffold00024 1527379 1 T G - ReadM SNP 0007.scaffold00024 1527439 1 C G - ReadM SNP 0007.scaffold00024 1527465 1 G A - ReadM SNP 0007.scaffold00024 1527492 1 A G - ReadM SNP 0007.scaffold00024 1527562 1 C T - ReadM SNP 0007.scaffold00024 1527565 1 C T - ReadM SNP 0007.scaffold00024 1527666 1 C T - ReadM SNP 0007.scaffold00024 1527842 1 G A - ReadM SNP 0007.scaffold00024 1527897 1 A G - ReadM SNP 0007.scaffold00024 1527963 1 G A - Both SNP 0007.scaffold00024 1528058 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1528465 1 A T - ReadM SNP 0007.scaffold00024 1528603 1 C T - ReadM SNP 0007.scaffold00024 1528804 1 A G - ReadM SNP 0007.scaffold00024 1528814 1 A T - ReadM SNP 0007.scaffold00024 1528954 1 T G - ReadM SNP 0007.scaffold00024 1529081 1 T G - ReadM SNP 0007.scaffold00024 1529280 1 C T - ReadM SNP 0007.scaffold00024 1529286 1 A G - ReadM SNP 0007.scaffold00024 1529689 1 A G - ReadM SNP 0007.scaffold00024 1529875 1 A T - ReadM SNP 0007.scaffold00024 1529889 1 T A - ReadM SNP 0007.scaffold00024 1529955 1 G C - ReadM SNP 0007.scaffold00024 1530020 1 T C - ReadM SNP 0007.scaffold00024 1530031 1 T G - ReadM SNP 0007.scaffold00024 1530128 1 C T - ReadM SNP 0007.scaffold00024 1530183 1 G A - ReadM SNP 0007.scaffold00024 1530196 1 A T - ReadM SNP 0007.scaffold00024 1530233 1 A G - ReadM SNP 0007.scaffold00024 1530247 1 G A - ReadM SNP 0007.scaffold00024 1530287 1 A G - ReadM SNP 0007.scaffold00024 1530401 1 C T - ReadM SNP 0007.scaffold00024 1530403 1 A G - ReadM SNP 0007.scaffold00024 1530579 1 A G - ReadM SNP 0007.scaffold00024 1530602 1 T A - ReadM SNP 0007.scaffold00024 1530630 1 C A - ReadM SNP 0007.scaffold00024 1530697 1 G A - ReadM SNP 0007.scaffold00024 1530727 1 C T - ReadM SNP 0007.scaffold00024 1530785 1 A T - ReadM SNP 0007.scaffold00024 1530794 1 T C - ReadM SNP 0007.scaffold00024 1530916 1 T C - ReadM SNP 0007.scaffold00024 1530976 1 A T - ReadM SNP 0007.scaffold00024 1530986 1 A G - ReadM SNP 0007.scaffold00024 1531056 1 C A - ReadM SNP 0007.scaffold00024 1531108 1 G T - ReadM SNP 0007.scaffold00024 1531154 1 T G - ReadM SNP 0007.scaffold00024 1531179 1 A G - Both SNP 0007.scaffold00024 1531190 1 G T scaffold1975 ReadM SNP 0007.scaffold00024 1531286 1 G A - ReadM SNP 0007.scaffold00024 1531306 1 C G - ReadM SNP 0007.scaffold00024 1531348 1 T C - ReadM SNP 0007.scaffold00024 1531599 1 C A - ReadM SNP 0007.scaffold00024 1531813 1 T A - ReadM SNP 0007.scaffold00024 1531822 1 T G - ReadM SNP 0007.scaffold00024 1531994 1 C T - ReadM SNP 0007.scaffold00024 1532008 1 C T - ReadM SNP 0007.scaffold00024 1532097 1 C T - ReadM SNP 0007.scaffold00024 1532257 1 C T - ReadM SNP 0007.scaffold00024 1532365 1 A G - ReadM SNP 0007.scaffold00024 1532435 1 C T - ReadM SNP 0007.scaffold00024 1532574 1 T G - ReadM SNP 0007.scaffold00024 1532616 1 T A - ReadM SNP 0007.scaffold00024 1532671 1 G C - ReadM SNP 0007.scaffold00024 1532698 1 A T - ReadM SNP 0007.scaffold00024 1532706 1 T C - ReadM INDEL 0007.scaffold00024 1532721 1 . A - ReadM SNP 0007.scaffold00024 1532945 1 T C - ReadM SNP 0007.scaffold00024 1532975 1 A G - ReadM SNP 0007.scaffold00024 1533003 1 A C - ReadM SNP 0007.scaffold00024 1533077 1 T G - ReadM SNP 0007.scaffold00024 1533114 1 A G - ReadM SNP 0007.scaffold00024 1533364 1 G A - ReadM SNP 0007.scaffold00024 1533527 1 A G - ReadM SNP 0007.scaffold00024 1533532 1 G A - ReadM SNP 0007.scaffold00024 1533558 1 T C - ReadM SNP 0007.scaffold00024 1533686 1 T C - ReadM INDEL 0007.scaffold00024 1533705 1 . G - ReadM SNP 0007.scaffold00024 1533730 1 A G - ReadM SNP 0007.scaffold00024 1533781 1 A G - ReadM SNP 0007.scaffold00024 1533788 1 A G - ReadM SNP 0007.scaffold00024 1533818 1 C A - ReadM SNP 0007.scaffold00024 1533838 1 G A - ReadM SNP 0007.scaffold00024 1533867 1 A G - ReadM SNP 0007.scaffold00024 1533979 1 A C - ReadM SNP 0007.scaffold00024 1533988 1 G A - ReadM INDEL 0007.scaffold00024 1534021 1 A . - ReadM SNP 0007.scaffold00024 1534068 1 T A - ReadM SNP 0007.scaffold00024 1534118 1 A C - ReadM SNP 0007.scaffold00024 1534155 1 G A - ReadM SNP 0007.scaffold00024 1534168 1 A G - ReadM SNP 0007.scaffold00024 1534407 1 C T - ReadM SNP 0007.scaffold00024 1534445 1 G A - ReadM INDEL 0007.scaffold00024 1534506 1 C . - ReadM SNP 0007.scaffold00024 1534554 1 C A - ReadM SNP 0007.scaffold00024 1534594 1 C T - ReadM SNP 0007.scaffold00024 1534658 1 G A - ReadM SNP 0007.scaffold00024 1534674 1 G C - ReadM SNP 0007.scaffold00024 1534685 1 T C - ReadM SNP 0007.scaffold00024 1534862 1 G T - ReadM SNP 0007.scaffold00024 1534962 1 T A - ReadM SNP 0007.scaffold00024 1535059 1 C T - ReadM SNP 0007.scaffold00024 1535280 1 T C - ReadM SNP 0007.scaffold00024 1535325 1 A C - ReadM SNP 0007.scaffold00024 1535428 1 G C - ReadM SNP 0007.scaffold00024 1535441 1 C A - ReadM SNP 0007.scaffold00024 1535448 1 T C - ReadM SNP 0007.scaffold00024 1535513 1 C T - ReadM SNP 0007.scaffold00024 1535529 1 G A - ReadM INDEL 0007.scaffold00024 1535643 1 . A - ReadM SNP 0007.scaffold00024 1535698 1 G T - ReadM SNP 0007.scaffold00024 1535798 1 T C - ReadM SNP 0007.scaffold00024 1535889 1 T C - ReadM SNP 0007.scaffold00024 1535955 1 A G - ReadM SNP 0007.scaffold00024 1535973 1 C A - ReadM SNP 0007.scaffold00024 1536056 1 A G - ReadM SNP 0007.scaffold00024 1536071 1 T A - ReadM SNP 0007.scaffold00024 1536126 1 A G - ReadM INDEL 0007.scaffold00024 1536145 1 . T - ReadM SNP 0007.scaffold00024 1536288 1 G C - ReadM SNP 0007.scaffold00024 1536373 1 G A - ReadM SNP 0007.scaffold00024 1536402 1 A C - ReadM SNP 0007.scaffold00024 1536416 1 G A - ReadM SNP 0007.scaffold00024 1536442 1 T C - ReadM SNP 0007.scaffold00024 1536774 1 C T - ReadM SNP 0007.scaffold00024 1536815 1 A G - ReadM SNP 0007.scaffold00024 1537153 1 T C - ReadM SNP 0007.scaffold00024 1537206 1 A G - ReadM SNP 0007.scaffold00024 1537429 1 C T - ReadM SNP 0007.scaffold00024 1537436 1 C A - ReadM SNP 0007.scaffold00024 1537451 1 G A - ReadM SNP 0007.scaffold00024 1537590 1 G A - ReadM SNP 0007.scaffold00024 1537629 1 C A - ReadM SNP 0007.scaffold00024 1537655 1 A G - ReadM INDEL 0007.scaffold00024 1537723 1 A . - ReadM SNP 0007.scaffold00024 1537784 1 A T - ReadM SNP 0007.scaffold00024 1537806 1 A T - ReadM INDEL 0007.scaffold00024 1537811 1 T . - ReadM SNP 0007.scaffold00024 1537854 1 T A - ReadM SNP 0007.scaffold00024 1537912 1 T C - Both SNP 0007.scaffold00024 1537958 1 A G scaffold1975 Both SNP 0007.scaffold00024 1538145 1 T C scaffold1975 Both SNP 0007.scaffold00024 1538160 1 A G scaffold1975 Both SNP 0007.scaffold00024 1538177 1 G A scaffold1975 Both SNP 0007.scaffold00024 1538243 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1538351 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1538357 1 A C scaffold1975 ScafM SNP 0007.scaffold00024 1538386 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1538396 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1538405 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1538467 1 A C scaffold1975 ScafM SNP 0007.scaffold00024 1538475 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1550519 1 T A scaffold1975 ScafM SNP 0007.scaffold00024 1550572 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1550603 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1550629 1 C T scaffold1975 ReadM SNP 0007.scaffold00024 1550875 1 T C - Both SNP 0007.scaffold00024 1550958 1 T A scaffold1975 ReadM SNP 0007.scaffold00024 1551078 1 C A - ReadM SNP 0007.scaffold00024 1551089 1 G C - ReadM SNP 0007.scaffold00024 1551205 1 A G - ReadM SNP 0007.scaffold00024 1551279 1 G T - ScafM SNP 0007.scaffold00024 1551381 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1551389 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1551406 1 C G - ReadM SNP 0007.scaffold00024 1551572 1 C A - ReadM SNP 0007.scaffold00024 1551599 1 C T - ReadM SNP 0007.scaffold00024 1551628 1 A T - ReadM SNP 0007.scaffold00024 1551847 1 G A - ReadM SNP 0007.scaffold00024 1551970 1 T C - Both SNP 0007.scaffold00024 1552063 1 C A scaffold1975 ReadM SNP 0007.scaffold00024 1552165 1 G C - ReadM SNP 0007.scaffold00024 1552198 1 T C - Both SNP 0007.scaffold00024 1552358 1 G A scaffold1975 Both SNP 0007.scaffold00024 1552364 1 T C scaffold1975 Both SNP 0007.scaffold00024 1552509 1 A C scaffold1975 Both INDEL 0007.scaffold00024 1552612 1 A . scaffold1975 Both SNP 0007.scaffold00024 1552826 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1552866 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1552877 1 C A scaffold1975 ScafM INDEL 0007.scaffold00024 1552881 1 T . scaffold1975 ScafM SNP 0007.scaffold00024 1552885 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1553004 1 G A - ReadM SNP 0007.scaffold00024 1553056 1 T A - ReadM SNP 0007.scaffold00024 1553084 1 G A - ReadM SNP 0007.scaffold00024 1553175 1 A T - Both SNP 0007.scaffold00024 1553247 1 G A scaffold1975 Both SNP 0007.scaffold00024 1553268 1 C T scaffold1975 Both SNP 0007.scaffold00024 1553286 1 G C scaffold1975 Both SNP 0007.scaffold00024 1553366 1 C A scaffold1975 Both SNP 0007.scaffold00024 1553373 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1553423 1 T C - ReadM SNP 0007.scaffold00024 1553441 1 T A - ReadM SNP 0007.scaffold00024 1553497 1 G A - ReadM SNP 0007.scaffold00024 1553601 1 C A - ReadM SNP 0007.scaffold00024 1554656 1 A G - ReadM SNP 0007.scaffold00024 1554858 1 A G - ReadM SNP 0007.scaffold00024 1554916 1 G C - ReadM SNP 0007.scaffold00024 1554941 1 C G - Both INDEL 0007.scaffold00024 1555056 1 A . scaffold1975 ReadM SNP 0007.scaffold00024 1555105 1 C T - ReadM SNP 0007.scaffold00024 1555187 1 G T - ReadM SNP 0007.scaffold00024 1555240 1 G A - ReadM SNP 0007.scaffold00024 1555261 1 G A - ReadM SNP 0007.scaffold00024 1555289 1 G A - ReadM SNP 0007.scaffold00024 1555333 1 G T - ReadM SNP 0007.scaffold00024 1555337 1 G T - ReadM SNP 0007.scaffold00024 1555393 1 T C - ReadM SNP 0007.scaffold00024 1555402 1 A G - ReadM SNP 0007.scaffold00024 1555498 1 C T - ReadM SNP 0007.scaffold00024 1555697 1 C T - ReadM SNP 0007.scaffold00024 1555725 1 A T - ReadM SNP 0007.scaffold00024 1555806 1 A C - ReadM SNP 0007.scaffold00024 1555909 1 G A - ReadM SNP 0007.scaffold00024 1555943 1 C T - ReadM SNP 0007.scaffold00024 1555958 1 T G - ReadM SNP 0007.scaffold00024 1556000 1 G A - ReadM SNP 0007.scaffold00024 1556038 1 G T - ReadM SNP 0007.scaffold00024 1556096 1 C T - ReadM SNP 0007.scaffold00024 1556126 1 A G - ReadM SNP 0007.scaffold00024 1556305 1 T C - ReadM SNP 0007.scaffold00024 1556341 1 T C - ReadM SNP 0007.scaffold00024 1556412 1 A G - ReadM SNP 0007.scaffold00024 1556446 1 A G - ReadM SNP 0007.scaffold00024 1556471 1 T C - ReadM SNP 0007.scaffold00024 1556581 1 G T - ReadM SNP 0007.scaffold00024 1556585 1 C T - ReadM SNP 0007.scaffold00024 1556659 1 G T - ReadM SNP 0007.scaffold00024 1556758 1 G A - ReadM SNP 0007.scaffold00024 1556830 1 T A - ReadM SNP 0007.scaffold00024 1556878 1 G A - ReadM SNP 0007.scaffold00024 1556962 1 T C - ReadM SNP 0007.scaffold00024 1557038 1 G A - ReadM SNP 0007.scaffold00024 1557087 1 A T - ReadM SNP 0007.scaffold00024 1557152 1 G A - ReadM SNP 0007.scaffold00024 1557176 1 C T - ReadM SNP 0007.scaffold00024 1557195 1 T A - Both SNP 0007.scaffold00024 1557367 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1557396 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1557411 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1557414 1 C A scaffold1975 Both SNP 0007.scaffold00024 1557431 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1557523 1 T G - ReadM SNP 0007.scaffold00024 1557533 1 A G - ReadM SNP 0007.scaffold00024 1557549 1 T G - ReadM SNP 0007.scaffold00024 1557579 1 G C - ReadM SNP 0007.scaffold00024 1557586 1 C T - ReadM SNP 0007.scaffold00024 1557594 1 T C - ScafM SNP 0007.scaffold00024 1557745 2 CA AG scaffold1975 Both SNP 0007.scaffold00024 1557896 1 G C scaffold1975 Both SNP 0007.scaffold00024 1557947 1 G T scaffold1975 ReadM SNP 0007.scaffold00024 1557997 1 C T - ReadM INDEL 0007.scaffold00024 1558024 1 G . - ReadM SNP 0007.scaffold00024 1558057 1 T C - Both SNP 0007.scaffold00024 1558098 1 C T scaffold1975 Both SNP 0007.scaffold00024 1558148 1 T C scaffold1975 Both INDEL 0007.scaffold00024 1558159 1 . C scaffold1975 ReadM SNP 0007.scaffold00024 1558282 1 T G - ReadM SNP 0007.scaffold00024 1558304 1 C T - ScafM SNP 0007.scaffold00024 1558355 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1558407 1 G T scaffold1975 Both SNP 0007.scaffold00024 1558489 1 T C scaffold1975 Both SNP 0007.scaffold00024 1558574 1 A C scaffold1975 ReadM SNP 0007.scaffold00024 1558595 1 G T - ReadM SNP 0007.scaffold00024 1558605 1 C T - ReadM SNP 0007.scaffold00024 1558680 1 C T - ReadM SNP 0007.scaffold00024 1558756 1 T A - ScafM SNP 0007.scaffold00024 1559085 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1559089 1 G T scaffold1975 ScafM SNP 0007.scaffold00024 1559117 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1559548 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1559553 1 G C scaffold1975 ReadM SNP 0007.scaffold00024 1559855 1 A G - ReadM SNP 0007.scaffold00024 1559888 1 G A - ReadM SNP 0007.scaffold00024 1559924 1 T G - ReadM SNP 0007.scaffold00024 1560069 1 C T - ReadM SNP 0007.scaffold00024 1560075 1 A G - ReadM SNP 0007.scaffold00024 1560175 1 G A - ReadM SNP 0007.scaffold00024 1560210 1 A G - ReadM SNP 0007.scaffold00024 1560806 1 A G - ReadM SNP 0007.scaffold00024 1561037 1 C T - ReadM SNP 0007.scaffold00024 1561059 1 T C - ReadM SNP 0007.scaffold00024 1561121 1 T A - ReadM SNP 0007.scaffold00024 1561127 1 A G - ReadM SNP 0007.scaffold00024 1561228 1 A G - ReadM SNP 0007.scaffold00024 1561452 1 A C - ReadM SNP 0007.scaffold00024 1561680 1 G A - ReadM SNP 0007.scaffold00024 1561782 1 A T - ReadM SNP 0007.scaffold00024 1561811 1 C T - ReadM SNP 0007.scaffold00024 1561856 1 A G - ReadM SNP 0007.scaffold00024 1561967 1 T A - ReadM SNP 0007.scaffold00024 1562077 1 G A - ReadM SNP 0007.scaffold00024 1562205 1 G T - ReadM SNP 0007.scaffold00024 1562251 1 A C - ReadM SNP 0007.scaffold00024 1562257 1 A C - ReadM SNP 0007.scaffold00024 1562294 1 A T - ReadM SNP 0007.scaffold00024 1562298 1 A C - ReadM SNP 0007.scaffold00024 1562319 1 T C - ReadM SNP 0007.scaffold00024 1562511 1 A G - ReadM SNP 0007.scaffold00024 1562554 1 G T - ReadM SNP 0007.scaffold00024 1562667 1 A G - ReadM SNP 0007.scaffold00024 1562707 1 A G - ReadM SNP 0007.scaffold00024 1562768 1 A T - ReadM SNP 0007.scaffold00024 1562852 1 G C - ReadM SNP 0007.scaffold00024 1562869 1 C T - ReadM SNP 0007.scaffold00024 1562915 1 G C - ReadM SNP 0007.scaffold00024 1562938 1 G A - ReadM SNP 0007.scaffold00024 1563091 1 A T - ReadM SNP 0007.scaffold00024 1563208 1 T A - ScafM SNP 0007.scaffold00024 1563677 1 C T scaffold1975 ScafM INDEL 0007.scaffold00024 1563686 3 ... GAC scaffold1975 ScafM SNP 0007.scaffold00024 1563844 1 A C scaffold1975 ReadM SNP 0007.scaffold00024 1563881 1 T C - ReadM SNP 0007.scaffold00024 1563972 1 C G - ReadM SNP 0007.scaffold00024 1563995 1 C A - ReadM SNP 0007.scaffold00024 1564045 1 G C - ReadM SNP 0007.scaffold00024 1564106 1 C T - ReadM SNP 0007.scaffold00024 1564176 1 C T - ReadM INDEL 0007.scaffold00024 1564195 1 A . - ReadM SNP 0007.scaffold00024 1564220 1 T C - ReadM INDEL 0007.scaffold00024 1564283 1 A . - ReadM SNP 0007.scaffold00024 1564453 1 G A - ReadM SNP 0007.scaffold00024 1564461 1 C T - ReadM SNP 0007.scaffold00024 1564484 1 T C - Both SNP 0007.scaffold00024 1564590 1 G A scaffold1975 Both SNP 0007.scaffold00024 1564601 1 G A scaffold1975 ScafM INDEL 0007.scaffold00024 1564787 8 ATGTGACA ........ scaffold1975 ScafM SNP 0007.scaffold00024 1564979 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1564982 2 GT CA scaffold1975 ScafM SNP 0007.scaffold00024 1565002 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1565010 1 C T scaffold1975 Both SNP 0007.scaffold00024 1565086 1 T C scaffold1975 Both SNP 0007.scaffold00024 1565131 1 A G scaffold1975 Both SNP 0007.scaffold00024 1565212 1 G A scaffold1975 Both SNP 0007.scaffold00024 1565216 1 T C scaffold1975 Both SNP 0007.scaffold00024 1565287 1 C G scaffold1975 Both SNP 0007.scaffold00024 1565297 1 C A scaffold1975 Both SNP 0007.scaffold00024 1565426 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1565577 1 C T - ReadM SNP 0007.scaffold00024 1565840 1 C A - ReadM SNP 0007.scaffold00024 1565857 1 A G - ReadM SNP 0007.scaffold00024 1565878 1 A C - ReadM SNP 0007.scaffold00024 1565971 1 T C - ReadM SNP 0007.scaffold00024 1566111 1 G A - ReadM SNP 0007.scaffold00024 1566148 1 G A - ReadM SNP 0007.scaffold00024 1566258 1 G T - ReadM SNP 0007.scaffold00024 1566267 1 T C - ReadM SNP 0007.scaffold00024 1566484 1 A C - ReadM SNP 0007.scaffold00024 1566506 1 T G - ReadM SNP 0007.scaffold00024 1566509 1 A C - ReadM SNP 0007.scaffold00024 1566571 1 C T - ReadM SNP 0007.scaffold00024 1566657 1 T C - ReadM SNP 0007.scaffold00024 1566819 1 T G - ReadM SNP 0007.scaffold00024 1567211 1 C T - ReadM SNP 0007.scaffold00024 1567236 1 A G - ReadM SNP 0007.scaffold00024 1567266 1 C G - ReadM SNP 0007.scaffold00024 1567309 1 A G - ReadM SNP 0007.scaffold00024 1567634 1 G A - ReadM SNP 0007.scaffold00024 1567665 1 T A - ReadM SNP 0007.scaffold00024 1567698 1 C T - ReadM SNP 0007.scaffold00024 1568155 1 T C - ReadM SNP 0007.scaffold00024 1568380 1 C G - ReadM SNP 0007.scaffold00024 1568400 1 G A - ReadM SNP 0007.scaffold00024 1568413 1 T C - ReadM SNP 0007.scaffold00024 1568455 1 C A - ReadM SNP 0007.scaffold00024 1568556 1 A G - ReadM SNP 0007.scaffold00024 1568582 1 T C - ReadM SNP 0007.scaffold00024 1568660 1 A C - ReadM SNP 0007.scaffold00024 1568688 1 A G - ReadM SNP 0007.scaffold00024 1568718 1 G A - ReadM SNP 0007.scaffold00024 1568790 1 C T - ReadM SNP 0007.scaffold00024 1568932 1 T C - ReadM SNP 0007.scaffold00024 1568981 1 G A - ReadM SNP 0007.scaffold00024 1569094 1 A C - ReadM SNP 0007.scaffold00024 1569169 1 C T - ReadM SNP 0007.scaffold00024 1569344 1 G T - ReadM SNP 0007.scaffold00024 1569385 1 C T - ReadM SNP 0007.scaffold00024 1569444 1 A G - ReadM SNP 0007.scaffold00024 1569470 1 T C - ReadM INDEL 0007.scaffold00024 1569633 3 CAT ... - ReadM SNP 0007.scaffold00024 1569750 1 C G - ReadM SNP 0007.scaffold00024 1569863 1 A G - ReadM SNP 0007.scaffold00024 1569880 1 G A - ReadM SNP 0007.scaffold00024 1569989 1 C T - ReadM SNP 0007.scaffold00024 1570094 1 C T - ReadM INDEL 0007.scaffold00024 1570139 3 TTT ... - ReadM SNP 0007.scaffold00024 1570233 1 G A - ReadM SNP 0007.scaffold00024 1570262 1 A T - ReadM SNP 0007.scaffold00024 1570436 1 G A - ReadM SNP 0007.scaffold00024 1570462 1 G A - Both SNP 0007.scaffold00024 1570581 1 A C scaffold1975 Both SNP 0007.scaffold00024 1570618 1 T C scaffold1975 ReadM SNP 0007.scaffold00024 1570667 1 G A - ReadM SNP 0007.scaffold00024 1570700 1 T C - ReadM SNP 0007.scaffold00024 1571028 1 C T - ReadM SNP 0007.scaffold00024 1571070 1 G T - ReadM SNP 0007.scaffold00024 1571235 1 G A - ReadM SNP 0007.scaffold00024 1571259 1 A C - ReadM INDEL 0007.scaffold00024 1571393 1 . A - Both SNP 0007.scaffold00024 1571513 1 A G scaffold1975 ReadM SNP 0007.scaffold00024 1571683 1 G A - ReadM SNP 0007.scaffold00024 1571706 1 C T - ReadM SNP 0007.scaffold00024 1571823 1 A T - ReadM SNP 0007.scaffold00024 1572046 1 T C - ReadM SNP 0007.scaffold00024 1572068 1 A C - ReadM SNP 0007.scaffold00024 1572179 1 T C - ReadM SNP 0007.scaffold00024 1572402 1 A T - ReadM SNP 0007.scaffold00024 1572422 1 G A - ReadM SNP 0007.scaffold00024 1572429 1 T G - ReadM SNP 0007.scaffold00024 1572536 1 C T - ReadM SNP 0007.scaffold00024 1572568 1 A G - ReadM SNP 0007.scaffold00024 1572638 1 G A - ReadM SNP 0007.scaffold00024 1572672 1 C T - ReadM SNP 0007.scaffold00024 1572895 1 G A - ReadM SNP 0007.scaffold00024 1573070 1 A T - ReadM SNP 0007.scaffold00024 1573109 1 C T - ReadM SNP 0007.scaffold00024 1573301 1 A C - ReadM SNP 0007.scaffold00024 1573357 1 T C - ReadM SNP 0007.scaffold00024 1573398 1 A C - ReadM SNP 0007.scaffold00024 1573590 1 A G - ReadM SNP 0007.scaffold00024 1573627 1 G C - ReadM SNP 0007.scaffold00024 1573859 1 T G - ReadM SNP 0007.scaffold00024 1573954 1 T C - ReadM SNP 0007.scaffold00024 1574009 1 C G - ReadM SNP 0007.scaffold00024 1574028 1 A T - ReadM SNP 0007.scaffold00024 1574070 1 G T - Both SNP 0007.scaffold00024 1574236 1 G A scaffold1975 Both SNP 0007.scaffold00024 1574286 1 T A scaffold1975 Both SNP 0007.scaffold00024 1574447 1 T G scaffold1975 Both SNP 0007.scaffold00024 1574453 1 T G scaffold1975 Both SNP 0007.scaffold00024 1574524 1 G T scaffold1975 Both SNP 0007.scaffold00024 1574568 1 A T scaffold1975 Both SNP 0007.scaffold00024 1574571 1 T G scaffold1975 Both SNP 0007.scaffold00024 1574637 1 G T scaffold1975 Both SNP 0007.scaffold00024 1574675 1 A T scaffold1975 Both SNP 0007.scaffold00024 1574692 1 G A scaffold1975 Both SNP 0007.scaffold00024 1574758 1 T G scaffold1975 Both SNP 0007.scaffold00024 1574767 1 C T scaffold1975 Both SNP 0007.scaffold00024 1574901 1 A G scaffold1975 ScafM SNP 0007.scaffold00024 1574944 1 T C scaffold1975 ScafM SNP 0007.scaffold00024 1574946 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1575053 2 AC TT scaffold1975 Both SNP 0007.scaffold00024 1575150 1 A G scaffold1975 Both SNP 0007.scaffold00024 1575165 1 G A scaffold1975 Both SNP 0007.scaffold00024 1575188 1 A T scaffold1975 Both SNP 0007.scaffold00024 1575192 1 G A scaffold1975 Both SNP 0007.scaffold00024 1575468 1 C T scaffold1975 Both SNP 0007.scaffold00024 1575472 1 C T scaffold1975 Both SNP 0007.scaffold00024 1575580 1 A G scaffold1975 Both SNP 0007.scaffold00024 1575721 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1575830 1 A G - ReadM SNP 0007.scaffold00024 1576003 1 C T - ReadM SNP 0007.scaffold00024 1576087 1 C T - ReadM SNP 0007.scaffold00024 1576189 1 C A - ReadM SNP 0007.scaffold00024 1576254 1 G A - ReadM SNP 0007.scaffold00024 1576692 1 T C - ReadM SNP 0007.scaffold00024 1576720 1 A G - ReadM SNP 0007.scaffold00024 1576741 1 C T - ReadM SNP 0007.scaffold00024 1576792 1 A G - Both SNP 0007.scaffold00024 1576910 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1577002 1 T G - ReadM SNP 0007.scaffold00024 1577314 1 T C - ReadM SNP 0007.scaffold00024 1577348 1 C T - ReadM INDEL 0007.scaffold00024 1577490 1 . A - ReadM SNP 0007.scaffold00024 1577647 1 G A - ReadM SNP 0007.scaffold00024 1577702 1 G A - ReadM SNP 0007.scaffold00024 1577731 1 A G - ReadM INDEL 0007.scaffold00024 1577790 2 .. CT - ReadM INDEL 0007.scaffold00024 1577791 1 . T - ReadM SNP 0007.scaffold00024 1577884 1 A G - ReadM SNP 0007.scaffold00024 1577959 1 C A - ReadM SNP 0007.scaffold00024 1577980 1 G A - ReadM SNP 0007.scaffold00024 1578078 1 G A - Both SNP 0007.scaffold00024 1578224 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1578250 1 A C scaffold1975 ScafM INDEL 0007.scaffold00024 1578251 6 ...... GGTCGA scaffold1975 ScafM SNP 0007.scaffold00024 1578352 1 T A scaffold1975 Both SNP 0007.scaffold00024 1578400 1 C G scaffold1975 ScafM SNP 0007.scaffold00024 1578438 1 T A scaffold1975 Both SNP 0007.scaffold00024 1578522 1 G C scaffold1975 Both SNP 0007.scaffold00024 1578551 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1578639 1 G A scaffold1975 ScafM INDEL 0007.scaffold00024 1578693 1 T . scaffold1975 ScafM SNP 0007.scaffold00024 1578701 1 A T scaffold1975 Both SNP 0007.scaffold00024 1578727 1 T G scaffold1975 Both SNP 0007.scaffold00024 1578738 1 C T scaffold1975 Both SNP 0007.scaffold00024 1578771 1 T C scaffold1975 Both SNP 0007.scaffold00024 1578866 1 T G scaffold1975 Both SNP 0007.scaffold00024 1578958 1 T G scaffold1975 Both SNP 0007.scaffold00024 1579034 1 G T scaffold1975 Both INDEL 0007.scaffold00024 1579059 1 . T scaffold1975 Both SNP 0007.scaffold00024 1579158 1 C T scaffold1975 Both SNP 0007.scaffold00024 1579242 1 C T scaffold1975 Both SNP 0007.scaffold00024 1579296 1 C T scaffold1975 Both INDEL 0007.scaffold00024 1579336 1 A . scaffold1975 Both SNP 0007.scaffold00024 1579349 1 T A scaffold1975 ReadM SNP 0007.scaffold00024 1579439 1 C G - ScafM SNP 0007.scaffold00024 1579532 1 C T scaffold1975 ScafM SNP 0007.scaffold00024 1579541 1 G A scaffold1975 ScafM SNP 0007.scaffold00024 1579564 2 CA AC scaffold1975 ScafM INDEL 0007.scaffold00024 1579622 13 ............. GGTTTGAAGAAGA scaffold1975 ScafM INDEL 0007.scaffold00024 1579643 2 .. AA scaffold1975 ScafM SNP 0007.scaffold00024 1579957 1 A C scaffold1975 ScafM SNP 0007.scaffold00024 1580068 1 T G scaffold1975 ScafM SNP 0007.scaffold00024 1580129 1 C A scaffold1975 ScafM SNP 0007.scaffold00024 1580169 1 G A scaffold1975 ReadM SNP 0007.scaffold00024 1583740 1 A G - ReadM SNP 0007.scaffold00024 1583748 1 A G - ReadM SNP 0007.scaffold00024 1584348 1 T A - ScafM SNP 0007.scaffold00024 1587633 1 A G scaffold9309 ScafM SNP 0007.scaffold00024 1587704 1 C T scaffold9309 ScafM SNP 0007.scaffold00024 1587742 1 C T scaffold9309 ReadM INDEL 0007.scaffold00024 1587926 1 A . - ReadM SNP 0007.scaffold00024 1587932 1 G A - ReadM SNP 0007.scaffold00024 1588034 1 A C - ReadM SNP 0007.scaffold00024 1588038 1 G A - ReadM SNP 0007.scaffold00024 1588055 1 C A - Both SNP 0007.scaffold00024 1588145 1 T G scaffold9309 Both SNP 0007.scaffold00024 1588183 1 C A scaffold9309 Both SNP 0007.scaffold00024 1588391 1 C T scaffold9309 Both SNP 0007.scaffold00024 1588463 1 A G scaffold9309 Both SNP 0007.scaffold00024 1588468 1 A G scaffold9309 Both SNP 0007.scaffold00024 1588495 1 T G scaffold9309 Both SNP 0007.scaffold00024 1588546 1 G A scaffold9309 Both SNP 0007.scaffold00024 1588569 1 G T scaffold9309 Both SNP 0007.scaffold00024 1588807 1 G A scaffold9309 Both SNP 0007.scaffold00024 1588833 1 A G scaffold9309 Both SNP 0007.scaffold00024 1589007 1 G T scaffold9309 Both SNP 0007.scaffold00024 1589062 1 G A scaffold9309 Both SNP 0007.scaffold00024 1589131 1 G A scaffold9309 Both SNP 0007.scaffold00024 1589199 1 C A scaffold9309 Both SNP 0007.scaffold00024 1589412 1 G A scaffold9309 ScafM INDEL 0007.scaffold00024 1589508 4 .... ATAC scaffold9309 Both SNP 0007.scaffold00024 1589559 1 T A scaffold9309 ReadM SNP 0007.scaffold00024 1589621 1 T C - ReadM SNP 0007.scaffold00024 1589645 1 C T - Both SNP 0007.scaffold00024 1589711 1 A C scaffold9309 Both SNP 0007.scaffold00024 1589872 1 C T scaffold9309 Both SNP 0007.scaffold00024 1589937 1 A G scaffold9309 Both SNP 0007.scaffold00024 1590052 1 G T scaffold9309 Both SNP 0007.scaffold00024 1590229 1 A C scaffold9309 Both SNP 0007.scaffold00024 1590264 1 C T scaffold9309 Both INDEL 0007.scaffold00024 1590297 1 C . scaffold9309 ReadM SNP 0007.scaffold00024 1590370 1 T C - ReadM SNP 0007.scaffold00024 1590404 1 C T - ReadM SNP 0007.scaffold00024 1590664 1 G A - ReadM SNP 0007.scaffold00024 1591139 1 T G - ScafM SNP 0007.scaffold00024 1591572 1 A G scaffold9309 ReadM SNP 0007.scaffold00024 1591669 1 G A - ReadM SNP 0007.scaffold00024 1591692 1 A C - ReadM SNP 0007.scaffold00024 1591781 1 C A - ReadM SNP 0007.scaffold00024 1592060 1 T G - ReadM SNP 0007.scaffold00024 1592137 1 T C - ReadM SNP 0007.scaffold00024 1592139 1 G A - ReadM SNP 0007.scaffold00024 1592207 1 G A - ReadM SNP 0007.scaffold00024 1592246 1 C G - ReadM SNP 0007.scaffold00024 1592296 1 G T - ReadM INDEL 0007.scaffold00024 1592361 2 TT .. - ReadM SNP 0007.scaffold00024 1592418 1 G A - ReadM SNP 0007.scaffold00024 1592472 1 C A - ReadM SNP 0007.scaffold00024 1592550 1 T C - ReadM INDEL 0007.scaffold00024 1592565 1 A . - ReadM SNP 0007.scaffold00024 1592572 1 C T - ReadM SNP 0007.scaffold00024 1592603 1 T C - ReadM SNP 0007.scaffold00024 1592785 1 G T - ReadM SNP 0007.scaffold00024 1592818 1 A T - ReadM SNP 0007.scaffold00024 1592834 1 A G - Both SNP 0007.scaffold00024 1593114 1 C T scaffold9309 Both SNP 0007.scaffold00024 1593209 1 T C scaffold9309 Both SNP 0007.scaffold00024 1593309 1 A C scaffold9309 Both SNP 0007.scaffold00024 1593342 1 T G scaffold9309 Both INDEL 0007.scaffold00024 1593384 2 TA .. scaffold9309 Both SNP 0007.scaffold00024 1593415 1 C T scaffold9309 Both SNP 0007.scaffold00024 1593478 1 A G scaffold9309 Both SNP 0007.scaffold00024 1593613 1 C A scaffold9309 Both SNP 0007.scaffold00024 1593800 1 A G scaffold9309 ReadM SNP 0007.scaffold00024 1594032 1 T G - ReadM SNP 0007.scaffold00024 1594206 1 G C - ReadM SNP 0007.scaffold00024 1594226 1 A G - ReadM SNP 0007.scaffold00024 1594349 1 G A - ReadM SNP 0007.scaffold00024 1594363 1 C G - ReadM SNP 0007.scaffold00024 1594645 1 G C - ReadM SNP 0007.scaffold00024 1594844 1 T C - ReadM SNP 0007.scaffold00024 1594931 1 G A - ReadM SNP 0007.scaffold00024 1595091 1 G C - ReadM SNP 0007.scaffold00024 1595176 1 T C - ReadM SNP 0007.scaffold00024 1595206 1 C T - ReadM SNP 0007.scaffold00024 1595218 1 G T - ReadM SNP 0007.scaffold00024 1595270 1 T A - ReadM SNP 0007.scaffold00024 1595362 1 A G - ReadM SNP 0007.scaffold00024 1595366 1 G A - ReadM SNP 0007.scaffold00024 1595424 1 G C - ReadM SNP 0007.scaffold00024 1595501 1 C T - ReadM SNP 0007.scaffold00024 1595584 1 C T - ReadM SNP 0007.scaffold00024 1595617 1 A G - ReadM SNP 0007.scaffold00024 1595622 1 G T - ReadM SNP 0007.scaffold00024 1595689 1 C T - ReadM SNP 0007.scaffold00024 1595718 1 G C - ReadM SNP 0007.scaffold00024 1595912 1 T G - ReadM SNP 0007.scaffold00024 1596108 1 G A - ReadM SNP 0007.scaffold00024 1596163 1 G A - ReadM SNP 0007.scaffold00024 1596275 1 C A - ReadM SNP 0007.scaffold00024 1596345 1 T A - ReadM SNP 0007.scaffold00024 1596379 1 G A - ReadM SNP 0007.scaffold00024 1596405 1 G T - ReadM SNP 0007.scaffold00024 1596656 1 A G - ReadM SNP 0007.scaffold00024 1596756 1 C T - ReadM SNP 0007.scaffold00024 1596824 1 T A - ReadM SNP 0007.scaffold00024 1596867 1 T C - ReadM INDEL 0007.scaffold00024 1596877 1 A . - ScafM SNP 0007.scaffold00024 1597002 2 TG CA scaffold9309 Both SNP 0007.scaffold00024 1597101 1 A C scaffold9309 Both SNP 0007.scaffold00024 1597232 1 C T scaffold9309 ScafM INDEL 0007.scaffold00024 1597326 4 .... ATAT scaffold9309 ScafM SNP 0007.scaffold00024 1597417 1 A G scaffold9309 ScafM INDEL 0007.scaffold00024 1597452 3 GAC ... scaffold9309 Both SNP 0007.scaffold00024 1597623 1 T C scaffold9309 Both SNP 0007.scaffold00024 1597843 1 T C scaffold9309 Both SNP 0007.scaffold00024 1597959 1 C A scaffold9309 Both SNP 0007.scaffold00024 1597974 1 G A scaffold9309 Both SNP 0007.scaffold00024 1598020 1 A C scaffold9309 Both SNP 0007.scaffold00024 1598205 1 A T scaffold9309 ReadM SNP 0007.scaffold00024 1598289 1 C G - ReadM SNP 0007.scaffold00024 1598379 1 C T - ReadM SNP 0007.scaffold00024 1598430 1 G A - ReadM SNP 0007.scaffold00024 1598537 1 A G - ReadM SNP 0007.scaffold00024 1598605 1 G T - ReadM INDEL 0007.scaffold00024 1598640 1 C . - ReadM SNP 0007.scaffold00024 1598679 1 T C - ReadM SNP 0007.scaffold00024 1598712 1 T C - ReadM SNP 0007.scaffold00024 1598782 1 A T - ReadM SNP 0007.scaffold00024 1598924 1 G A - ReadM SNP 0007.scaffold00024 1599017 1 T C - Both SNP 0007.scaffold00024 1599173 1 G A scaffold9309 ReadM SNP 0007.scaffold00024 1599218 1 C G - Both SNP 0007.scaffold00024 1599452 1 T C scaffold9309 Both SNP 0007.scaffold00024 1599544 1 C T scaffold9309 ScafM SNP 0007.scaffold00024 1599637 1 C G scaffold9309 ScafM SNP 0007.scaffold00024 1599640 1 A G scaffold9309 Both SNP 0007.scaffold00024 1599657 1 G A scaffold9309 Both SNP 0007.scaffold00024 1599671 1 C T scaffold9309 ScafM INDEL 0007.scaffold00024 1600018 4 .... ATCG scaffold9309 Both SNP 0007.scaffold00024 1600058 1 A G scaffold9309 ReadM SNP 0007.scaffold00024 1600156 1 T A - ReadM SNP 0007.scaffold00024 1600326 1 T C - ReadM SNP 0007.scaffold00024 1600381 1 G A - ReadM SNP 0007.scaffold00024 1600493 1 A G - ReadM SNP 0007.scaffold00024 1600571 1 A T - ReadM SNP 0007.scaffold00024 1600770 1 G C - ReadM SNP 0007.scaffold00024 1601187 1 A G - ReadM SNP 0007.scaffold00024 1601316 1 G A - ReadM SNP 0007.scaffold00024 1601544 1 T A - Both SNP 0007.scaffold00024 1601711 1 G A scaffold9309 Both SNP 0007.scaffold00024 1601820 1 G A scaffold9309 Both SNP 0007.scaffold00024 1601919 1 A T scaffold9309 Both SNP 0007.scaffold00024 1601924 1 A C scaffold9309 Both SNP 0007.scaffold00024 1601936 1 A G scaffold9309 Both SNP 0007.scaffold00024 1601973 1 C A scaffold9309 Both SNP 0007.scaffold00024 1601979 1 G C scaffold9309 Both SNP 0007.scaffold00024 1602877 1 A G scaffold9309 Both SNP 0007.scaffold00024 1603215 1 C A scaffold9309 Both SNP 0007.scaffold00024 1603602 1 T A scaffold9309 Both SNP 0007.scaffold00024 1603925 1 T A scaffold9309 ReadM SNP 0007.scaffold00024 1604409 1 A G - ReadM SNP 0007.scaffold00024 1604573 1 A G - ReadM SNP 0007.scaffold00024 1604598 1 G A - ReadM SNP 0007.scaffold00024 1604733 1 A G - ReadM SNP 0007.scaffold00024 1604786 1 T C - ReadM SNP 0007.scaffold00024 1605074 1 A T - Both SNP 0007.scaffold00024 1605337 1 G A scaffold9309 Both SNP 0007.scaffold00024 1605496 1 T G scaffold9309 Both SNP 0007.scaffold00024 1605598 1 A G scaffold9309 Both SNP 0007.scaffold00024 1605748 1 G A scaffold9309 Both INDEL 0007.scaffold00024 1605995 1 A . scaffold9309 Both SNP 0007.scaffold00024 1606113 1 G A scaffold9309 ReadM SNP 0007.scaffold00024 1606475 1 G A - Both SNP 0007.scaffold00024 1606791 1 T G scaffold9309 Both SNP 0007.scaffold00024 1607375 1 C A scaffold9309 Both SNP 0007.scaffold00024 1607446 1 C T scaffold9309 Both SNP 0007.scaffold00024 1607472 1 G A scaffold9309 ReadM SNP 0007.scaffold00024 1607602 1 T C - ReadM SNP 0007.scaffold00024 1607622 1 A C - Both SNP 0007.scaffold00024 1607812 1 A G scaffold9309 Both SNP 0007.scaffold00024 1607979 1 C G scaffold9309 Both INDEL 0007.scaffold00024 1608020 2 AA .. scaffold9309 Both SNP 0007.scaffold00024 1608101 1 T A scaffold9309 ReadM SNP 0007.scaffold00024 1608194 1 T A - Both SNP 0007.scaffold00024 1608653 1 G T scaffold9309 ScafM SNP 0007.scaffold00024 1608699 1 C T scaffold9309 ScafM INDEL 0007.scaffold00024 1608727 7 AGTCTAG ....... scaffold9309 Both SNP 0007.scaffold00024 1608868 1 C T scaffold9309 ScafM SNP 0007.scaffold00024 1608891 1 T C scaffold9309 ScafM INDEL 0007.scaffold00024 1608895 5 TAAAA ..... scaffold9309 ScafM SNP 0007.scaffold00024 1608908 1 G C scaffold9309 ScafM SNP 0007.scaffold00024 1608911 1 G A scaffold9309 ScafM SNP 0007.scaffold00024 1608917 1 T A scaffold9309 ScafM SNP 0007.scaffold00024 1608934 1 T G scaffold9309 ScafM SNP 0007.scaffold00024 1608994 1 A C scaffold9309 Both SNP 0007.scaffold00024 1609010 1 T G scaffold9309 Both SNP 0007.scaffold00024 1609024 1 A C scaffold9309 ReadM SNP 0007.scaffold00024 1609046 1 T C - ReadM SNP 0007.scaffold00024 1609165 1 T C - Both SNP 0007.scaffold00024 1609291 1 T C scaffold9309 ReadM SNP 0007.scaffold00024 1609546 1 A G - Both SNP 0007.scaffold00024 1609604 1 G A scaffold9309 ReadM SNP 0007.scaffold00024 1609989 1 C T - ReadM SNP 0007.scaffold00024 1610190 1 T C - ReadM SNP 0007.scaffold00024 1610290 1 G A - Both SNP 0007.scaffold00024 1610567 1 T C scaffold9309 ScafM SNP 0007.scaffold00024 1610702 1 T A scaffold9309 Both INDEL 0007.scaffold00024 1610955 1 . T scaffold9309 Both SNP 0007.scaffold00024 1611154 1 T C scaffold9309 ReadM INDEL 0007.scaffold00024 1611325 1 A . - ScafM SNP 0007.scaffold00024 1611367 2 TT AA scaffold9309 Both SNP 0007.scaffold00024 1611603 1 A C scaffold9309 ReadM SNP 0007.scaffold00024 1611788 1 G A - ReadM SNP 0007.scaffold00024 1611868 1 T C - Both SNP 0007.scaffold00024 1611943 1 A C scaffold9309 Both INDEL 0007.scaffold00024 1612017 2 AC .. scaffold9309 Both SNP 0007.scaffold00024 1612805 1 A C scaffold9309 ReadM SNP 0007.scaffold00024 1612835 1 G A - ReadM SNP 0007.scaffold00024 1612987 1 A G - Both SNP 0007.scaffold00024 1613112 1 C G scaffold9309 Both SNP 0007.scaffold00024 1613283 1 A G scaffold9309 Both SNP 0007.scaffold00024 1613397 1 C T scaffold9309 ReadM SNP 0007.scaffold00024 1613946 1 A G - Both SNP 0007.scaffold00024 1614130 1 G A scaffold9309 Both SNP 0007.scaffold00024 1614163 1 G A scaffold9309 Both SNP 0007.scaffold00024 1614189 1 T C scaffold9309 ScafM INDEL 0007.scaffold00024 1614247 58 .......................................................... ATGATGATAGATAAACTACCTCCTATCACACAGGCTTACAGACTTTTGCTTCAAGAGC scaffold9309 Both SNP 0007.scaffold00024 1614492 1 C T scaffold9309 ReadM SNP 0007.scaffold00024 1615204 1 A G - Both SNP 0007.scaffold00024 1615411 1 T C scaffold9309 Both SNP 0007.scaffold00024 1615441 1 T A scaffold9309 Both SNP 0007.scaffold00024 1615532 1 A C scaffold9309 Both INDEL 0007.scaffold00024 1615673 1 C . scaffold9309 Both SNP 0007.scaffold00024 1616002 1 T C scaffold9309 ReadM SNP 0007.scaffold00024 1616561 1 T A - ScafM INDEL 0007.scaffold00024 1617669 13 GCTCTAGCTCACT ............. scaffold9309 ScafM INDEL 0007.scaffold00024 1617684 7 GTCAGTC ....... scaffold9309 Both SNP 0007.scaffold00024 1617717 1 A G scaffold9309 ScafM SNP 0007.scaffold00024 1618267 1 G C scaffold9309 ReadM SNP 0007.scaffold00024 1618695 1 C T - Both INDEL 0007.scaffold00024 1618876 1 . T scaffold9309 ReadM SNP 0007.scaffold00024 1619307 1 C A - ReadM SNP 0007.scaffold00024 1619441 1 A G - ScafM SNP 0007.scaffold00024 1621475 1 G T scaffold9467 Both SNP 0007.scaffold00024 1621798 1 C G scaffold2303 Both SNP 0007.scaffold00024 1621918 1 A G scaffold2303 ScafM SNP 0007.scaffold00024 1622212 1 A G scaffold7366 ReadM SNP 0007.scaffold00024 1622245 1 A C - ReadM SNP 0007.scaffold00024 1622504 1 A G - ReadM SNP 0007.scaffold00024 1622636 1 C T - ReadM SNP 0007.scaffold00024 1622648 1 G C - ReadM SNP 0007.scaffold00024 1623336 1 A G - ReadM SNP 0007.scaffold00024 1623367 1 G A - ReadM SNP 0007.scaffold00024 1623459 1 T G - Both SNP 0007.scaffold00024 1623546 1 G A scaffold2303 Both SNP 0007.scaffold00024 1623743 1 A T scaffold2303 ReadM SNP 0007.scaffold00024 1624443 1 G A - ReadM SNP 0007.scaffold00024 1624601 1 T C - ReadM SNP 0007.scaffold00024 1624982 1 T G - ReadM SNP 0007.scaffold00024 1625311 1 C G - ReadM SNP 0007.scaffold00024 1625330 1 C T - Both SNP 0007.scaffold00024 1625479 1 G A scaffold2303 Both SNP 0007.scaffold00024 1625514 1 A G scaffold2303 ScafM SNP 0007.scaffold00024 1625869 1 T C scaffold2303 ReadM SNP 0007.scaffold00024 1626280 1 A C - Both INDEL 0007.scaffold00024 1626648 1 T . scaffold2303 Both INDEL 0007.scaffold00024 1626792 1 A . scaffold2303 Both SNP 0007.scaffold00024 1626869 1 T C scaffold2303 ReadM SNP 0007.scaffold00024 1626962 1 A G - ReadM SNP 0007.scaffold00024 1627057 1 G A - Both INDEL 0007.scaffold00024 1627118 1 C . scaffold2303 Both SNP 0007.scaffold00024 1627130 1 G A scaffold2303 Both SNP 0007.scaffold00024 1627234 1 G A scaffold2303 Both INDEL 0007.scaffold00024 1627396 2 TT .. scaffold2303 ReadM SNP 0007.scaffold00024 1627460 1 A T - ReadM SNP 0007.scaffold00024 1627485 1 C A - Both SNP 0007.scaffold00024 1629341 1 T A scaffold2303 Both SNP 0007.scaffold00024 1629704 1 G A scaffold2303 ScafM INDEL 0007.scaffold00024 1629965 1 G . scaffold2303 ScafM INDEL 0007.scaffold00024 1629979 4 CCCG .... scaffold2303 Both SNP 0007.scaffold00024 1630041 1 C A scaffold2303 Both SNP 0007.scaffold00024 1630412 1 G A scaffold2303 Both SNP 0007.scaffold00024 1630568 1 C A scaffold2303 Both SNP 0007.scaffold00024 1630766 1 A G scaffold2303 Both SNP 0007.scaffold00024 1631277 1 G A scaffold2303 Both SNP 0007.scaffold00024 1631879 1 G C scaffold2303 Both INDEL 0007.scaffold00024 1632071 2 CT .. scaffold2303 Both SNP 0007.scaffold00024 1632309 1 A G scaffold2303 Both SNP 0007.scaffold00024 1632365 1 C T scaffold2303 ReadM SNP 0007.scaffold00024 1632379 1 T C - Both SNP 0007.scaffold00024 1632729 1 A T scaffold2303 Both SNP 0007.scaffold00024 1633226 1 T C scaffold2303 Both SNP 0007.scaffold00024 1634299 1 C A scaffold2303 Both INDEL 0007.scaffold00024 1634547 1 . G scaffold2303 ScafM SNP 0007.scaffold00024 1634549 1 A C scaffold2303 ScafM SNP 0007.scaffold00024 1634926 1 T A scaffold2303 ReadM SNP 0007.scaffold00024 1635032 1 C T - ReadM SNP 0007.scaffold00024 1635166 1 C T - ReadM SNP 0007.scaffold00024 1635752 1 T C - ReadM SNP 0007.scaffold00024 1636013 1 A G - Both SNP 0007.scaffold00024 1636473 1 A G scaffold2303 Both SNP 0007.scaffold00024 1636539 1 C A scaffold2303 Both SNP 0007.scaffold00024 1636765 1 C T scaffold2303 Both SNP 0007.scaffold00024 1636832 1 T C scaffold2303 ReadM INDEL 0007.scaffold00024 1636938 3 ... TAT - Both SNP 0007.scaffold00024 1639183 1 G C scaffold2303 Both SNP 0007.scaffold00024 1639329 1 T A scaffold2303 Both SNP 0007.scaffold00024 1639334 1 A G scaffold2303 Both SNP 0007.scaffold00024 1639419 1 C T scaffold2303 Both SNP 0007.scaffold00024 1639434 1 C T scaffold2303 ScafM SNP 0007.scaffold00024 1640170 1 T G scaffold2303 ScafM SNP 0007.scaffold00024 1640187 1 T C scaffold2303 ReadM SNP 0007.scaffold00024 1641905 1 G T - ReadM SNP 0007.scaffold00024 1642361 1 A G - Both SNP 0007.scaffold00024 1642466 1 C T scaffold2303 ScafM INDEL 0007.scaffold00024 1642493 3 ... AAA scaffold2303 Both SNP 0007.scaffold00024 1642825 1 C T scaffold2303 Both SNP 0007.scaffold00024 1642929 1 C T scaffold2303 Both SNP 0007.scaffold00024 1642994 1 A G scaffold2303 ReadM SNP 0007.scaffold00024 1643100 1 T C - ReadM SNP 0007.scaffold00024 1643465 1 T G - ReadM INDEL 0007.scaffold00024 1643740 2 AA .. - ReadM SNP 0007.scaffold00024 1644068 1 C T - ReadM SNP 0007.scaffold00024 1644495 1 T A - ReadM SNP 0007.scaffold00024 1644665 1 A G - ReadM SNP 0007.scaffold00024 1644765 1 C T - Both SNP 0007.scaffold00024 1645516 1 A G scaffold2303 Both SNP 0007.scaffold00024 1645714 1 G A scaffold2303 Both SNP 0007.scaffold00024 1645761 1 G A scaffold2303 ReadM SNP 0007.scaffold00024 1645972 1 A C - ReadM SNP 0007.scaffold00024 1646180 1 G A - ReadM SNP 0007.scaffold00024 1646264 1 G T - ReadM SNP 0007.scaffold00024 1646362 1 T G - ReadM SNP 0007.scaffold00024 1646732 1 T A - ReadM SNP 0007.scaffold00024 1646786 1 T C - Both INDEL 0007.scaffold00024 1646871 1 T . scaffold2303 Both SNP 0007.scaffold00024 1646994 1 G A scaffold2303 ReadM SNP 0007.scaffold00024 1647017 1 A G - ReadM SNP 0007.scaffold00024 1647251 1 G C - ReadM SNP 0007.scaffold00024 1647259 1 T C - ReadM SNP 0007.scaffold00024 1649668 1 C A - ReadM SNP 0007.scaffold00024 1649691 1 T A - ReadM SNP 0007.scaffold00024 1649766 1 A G - ReadM INDEL 0007.scaffold00024 1650216 1 A . - ReadM SNP 0007.scaffold00024 1650263 1 T C - ReadM SNP 0007.scaffold00024 1650517 1 T C - ReadM SNP 0007.scaffold00024 1650525 1 T C - ReadM INDEL 0007.scaffold00024 1650610 1 A . - ReadM SNP 0007.scaffold00024 1650800 1 C T - ReadM SNP 0007.scaffold00024 1651185 1 T G - ReadM INDEL 0007.scaffold00024 1655481 1 . A - ScafM INDEL 0007.scaffold00024 1655770 1 T . scaffold2303 ScafM SNP 0007.scaffold00024 1655788 1 A G scaffold2303 Both INDEL 0007.scaffold00024 1655817 1 T . scaffold2303 Both SNP 0007.scaffold00024 1655847 1 C A scaffold2303 Both SNP 0007.scaffold00024 1655865 1 A C scaffold2303 Both SNP 0007.scaffold00024 1656207 1 A G scaffold2303 ReadM SNP 0007.scaffold00024 1656378 1 T A - ReadM SNP 0007.scaffold00024 1656750 1 T C - ReadM SNP 0007.scaffold00024 1656892 1 G A - ReadM SNP 0007.scaffold00024 1656931 1 G A - ReadM SNP 0007.scaffold00024 1656949 1 A G - ReadM SNP 0007.scaffold00024 1657009 1 T G - ReadM SNP 0007.scaffold00024 1657087 1 A C - ReadM SNP 0007.scaffold00024 1657307 1 A G - ReadM SNP 0007.scaffold00024 1657382 1 T C - ReadM SNP 0007.scaffold00024 1657543 1 A G - ReadM SNP 0007.scaffold00024 1657656 1 C T - ReadM SNP 0007.scaffold00024 1657813 1 C T - ReadM SNP 0007.scaffold00024 1657845 1 C T - ReadM SNP 0007.scaffold00024 1658167 1 C T - ReadM SNP 0007.scaffold00024 1659629 1 A T - ReadM SNP 0007.scaffold00024 1659729 1 C T - ReadM SNP 0007.scaffold00024 1659759 1 C T - ReadM SNP 0007.scaffold00024 1659978 1 A G - ReadM SNP 0007.scaffold00024 1659999 1 T G - ReadM SNP 0007.scaffold00024 1660328 1 T C - ReadM SNP 0007.scaffold00024 1660461 1 A G - ReadM SNP 0007.scaffold00024 1660576 1 G A - ReadM SNP 0007.scaffold00024 1660604 1 C T - ReadM SNP 0007.scaffold00024 1660842 1 T C - ReadM SNP 0007.scaffold00024 1660881 1 T C - ReadM SNP 0007.scaffold00024 1661107 1 C T - ReadM SNP 0007.scaffold00024 1661345 1 T G - ReadM SNP 0007.scaffold00024 1661399 1 C A - ReadM SNP 0007.scaffold00024 1661526 1 T C - ReadM SNP 0007.scaffold00024 1661694 1 G A - ReadM SNP 0007.scaffold00024 1661897 1 C T - ReadM SNP 0007.scaffold00024 1662105 1 C G - ReadM SNP 0007.scaffold00024 1662409 1 C A - ReadM SNP 0007.scaffold00024 1662554 1 G A - ReadM SNP 0007.scaffold00024 1662731 1 G A - ReadM SNP 0007.scaffold00024 1662817 1 C T - ReadM SNP 0007.scaffold00024 1662874 1 G A - ReadM SNP 0007.scaffold00024 1662978 1 C T - ReadM SNP 0007.scaffold00024 1663171 1 T C - ReadM SNP 0007.scaffold00024 1663297 1 G C - ReadM SNP 0007.scaffold00024 1663350 1 T G - ReadM SNP 0007.scaffold00024 1663385 1 G A - ReadM SNP 0007.scaffold00024 1663411 1 A G - ReadM SNP 0007.scaffold00024 1663617 1 A G - ReadM SNP 0007.scaffold00024 1663660 1 T G - ReadM SNP 0007.scaffold00024 1663726 1 C A - ReadM SNP 0007.scaffold00024 1663743 1 G A - ReadM INDEL 0007.scaffold00024 1663767 1 A . - ReadM INDEL 0007.scaffold00024 1663859 2 .. TC - ReadM SNP 0007.scaffold00024 1663982 1 C T - ReadM SNP 0007.scaffold00024 1664125 1 C G - ReadM SNP 0007.scaffold00024 1664134 1 G T - ReadM SNP 0007.scaffold00024 1664305 1 G A - ReadM SNP 0007.scaffold00024 1664322 1 C G - ReadM SNP 0007.scaffold00024 1664515 1 G C - ReadM SNP 0007.scaffold00024 1664543 1 G T - ReadM SNP 0007.scaffold00024 1664676 1 A C - ReadM SNP 0007.scaffold00024 1664770 1 G A - ReadM SNP 0007.scaffold00024 1664849 1 T C - ReadM SNP 0007.scaffold00024 1664863 1 T C - ReadM SNP 0007.scaffold00024 1665009 1 C T - ReadM SNP 0007.scaffold00024 1665012 1 A G - ReadM SNP 0007.scaffold00024 1665102 1 C T - ReadM SNP 0007.scaffold00024 1665158 1 C G - ReadM SNP 0007.scaffold00024 1665190 1 G A - ReadM INDEL 0007.scaffold00024 1665280 3 TAT ... - ReadM INDEL 0007.scaffold00024 1665481 1 . A - Both SNP 0007.scaffold00024 1665578 1 C T scaffold2303 Both SNP 0007.scaffold00024 1665796 1 T G scaffold2303 Both SNP 0007.scaffold00024 1666107 1 G A scaffold2303 Both SNP 0007.scaffold00024 1666124 1 G A scaffold2303 Both SNP 0007.scaffold00024 1666172 1 A G scaffold2303 Both SNP 0007.scaffold00024 1666652 1 T A scaffold2303 Both SNP 0007.scaffold00024 1666706 1 G A scaffold2303 Both SNP 0007.scaffold00024 1666717 1 C T scaffold2303 ReadM SNP 0007.scaffold00024 1666808 1 C T - ReadM SNP 0007.scaffold00024 1666840 1 T C - ReadM SNP 0007.scaffold00024 1666974 1 C T - ReadM SNP 0007.scaffold00024 1667008 1 T C - ScafM INDEL 0007.scaffold00024 1667391 6 ...... AAACCA scaffold2303 Both SNP 0007.scaffold00024 1668005 1 C T scaffold2303 ReadM SNP 0007.scaffold00024 1668376 1 T C - ReadM SNP 0007.scaffold00024 1668392 2 GC AA - Both SNP 0007.scaffold00024 1668613 1 C T scaffold2303 Both SNP 0007.scaffold00024 1668687 1 C T scaffold2303 Both SNP 0007.scaffold00024 1668750 1 C T scaffold2303 Both SNP 0007.scaffold00024 1669112 1 T G scaffold2303 Both SNP 0007.scaffold00024 1669410 1 C G scaffold2303 Both SNP 0007.scaffold00024 1669603 1 A T scaffold2303 Both SNP 0007.scaffold00024 1669655 1 T G scaffold2303 Both SNP 0007.scaffold00024 1670018 1 A T scaffold2303 Both SNP 0007.scaffold00024 1670109 1 T G scaffold2303 Both SNP 0007.scaffold00024 1670321 1 C T scaffold2303 ReadM SNP 0007.scaffold00024 1671308 1 T A - ReadM SNP 0007.scaffold00024 1671329 1 A G - ReadM SNP 0007.scaffold00024 1671349 1 G A - ReadM SNP 0007.scaffold00024 1671626 1 C T - Both SNP 0007.scaffold00024 1671795 1 A G scaffold2303 Both SNP 0007.scaffold00024 1672660 1 C A scaffold2303 Both INDEL 0007.scaffold00024 1672931 1 A . scaffold2303 Both SNP 0007.scaffold00024 1673118 1 T A scaffold2303 Both SNP 0007.scaffold00024 1674431 1 G A scaffold2303 Both SNP 0007.scaffold00024 1674611 1 T C scaffold2303 Both SNP 0007.scaffold00024 1674981 1 T A scaffold2303 ReadM SNP 0007.scaffold00024 1675265 1 T C - Both SNP 0007.scaffold00024 1675563 1 A G scaffold2303 Both SNP 0007.scaffold00024 1675967 1 A T scaffold2303 Both SNP 0007.scaffold00024 1676049 1 A T scaffold2303 Both INDEL 0007.scaffold00024 1676072 2 .. AC scaffold2303 Both SNP 0007.scaffold00024 1677126 1 C T scaffold2303 Both SNP 0007.scaffold00024 1677195 1 A G scaffold2303 Both SNP 0007.scaffold00024 1677935 1 T A scaffold2303 ScafM SNP 0007.scaffold00024 1678043 1 C T scaffold2303 ScafM SNP 0007.scaffold00024 1678222 1 T G scaffold2303 ScafM INDEL 0007.scaffold00024 1679014 4 .... TATA scaffold2303 ScafM INDEL 0007.scaffold00024 1679073 1 T . scaffold2303 Both SNP 0007.scaffold00024 1679543 1 A C scaffold2303 Both INDEL 0007.scaffold00024 1679593 2 TC .. scaffold2303 Both SNP 0007.scaffold00024 1679871 1 C T scaffold2303 Both SNP 0007.scaffold00024 1680287 1 T C scaffold2303 ScafM SNP 0007.scaffold00024 1680331 1 G A scaffold2303 ScafM SNP 0007.scaffold00024 1680350 1 G T scaffold2303 ScafM SNP 0007.scaffold00024 1680355 2 TT CC scaffold2303 ScafM SNP 0007.scaffold00024 1680658 2 GC AT scaffold2303 Both SNP 0007.scaffold00024 1680673 1 A C scaffold2303 ReadM INDEL 0007.scaffold00024 1681795 1 . C - ScafM INDEL 0007.scaffold00024 1681795 2 .T CA scaffold2303 Both SNP 0007.scaffold00024 1682425 1 C T scaffold2303 ReadM SNP 0007.scaffold00024 1682511 1 C T - ReadM SNP 0007.scaffold00024 1682596 1 G T - ReadM SNP 0007.scaffold00024 1682744 1 T A - ReadM SNP 0007.scaffold00024 1683167 1 C T - ReadM SNP 0007.scaffold00024 1683405 1 A G - ReadM SNP 0007.scaffold00024 1683533 1 A T - ReadM SNP 0007.scaffold00024 1684015 1 A G - Both SNP 0007.scaffold00024 1684396 1 T C scaffold2303 Both SNP 0007.scaffold00024 1684399 1 G C scaffold2303 Both SNP 0007.scaffold00024 1684547 1 A G scaffold2303 ScafM INDEL 0007.scaffold00024 1684616 1 A . scaffold2303 ReadM SNP 0007.scaffold00024 1684794 1 A G - ReadM SNP 0007.scaffold00024 1684932 1 G T - Both SNP 0007.scaffold00024 1685319 1 C T scaffold2303 Both SNP 0007.scaffold00024 1685411 1 G T scaffold2303 Both SNP 0007.scaffold00024 1685550 1 A C scaffold2303 ScafM SNP 0007.scaffold00024 1685954 3 AAA TGC scaffold2303 ScafM INDEL 0007.scaffold00024 1695539 1 A . scaffold3898 ScafM INDEL 0007.scaffold00024 1695549 1 A . scaffold3898 ScafM SNP 0007.scaffold00024 1695564 1 A C scaffold3898 ScafM INDEL 0007.scaffold00024 1695610 1 A . scaffold3898 ScafM SNP 0007.scaffold00024 1695645 1 A G scaffold3898 ScafM SNP 0007.scaffold00024 1695790 1 A G scaffold3898 ScafM SNP 0007.scaffold00024 1695869 1 A G scaffold3898 Both INDEL 0007.scaffold00024 1696301 1 . C scaffold3898 Both SNP 0007.scaffold00024 1696350 1 A C scaffold3898 Both SNP 0007.scaffold00024 1696424 1 C T scaffold3898 ScafM INDEL 0007.scaffold00024 1696508 2 .. TT scaffold3898 ReadM SNP 0007.scaffold00024 1696536 1 A G - Both SNP 0007.scaffold00024 1696644 1 G C scaffold3898 ReadM SNP 0007.scaffold00024 1696805 1 A G - ReadM SNP 0007.scaffold00024 1696813 1 T C - ReadM SNP 0007.scaffold00024 1696955 1 T C - ReadM SNP 0007.scaffold00024 1697050 1 C A - ReadM SNP 0007.scaffold00024 1697082 1 T A - ReadM SNP 0007.scaffold00024 1697106 1 C G - ScafM SNP 0007.scaffold00024 1700009 1 T A scaffold3898 ReadM SNP 0007.scaffold00024 1700797 1 A G - Both SNP 0007.scaffold00024 1700834 1 T C scaffold3898 Both SNP 0007.scaffold00024 1700855 1 T C scaffold3898 Both SNP 0007.scaffold00024 1700938 1 A C scaffold3898 ReadM INDEL 0007.scaffold00024 1701092 3 TAT ... - ReadM SNP 0007.scaffold00024 1701248 1 A T - ReadM SNP 0007.scaffold00024 1701342 1 T A - ReadM SNP 0007.scaffold00024 1701432 1 C G - ReadM SNP 0007.scaffold00024 1701555 1 C A - ReadM SNP 0007.scaffold00024 1701595 1 T G - ReadM SNP 0007.scaffold00024 1701652 1 G A - Both SNP 0007.scaffold00024 1701917 1 A T scaffold3898 Both INDEL 0007.scaffold00024 1702077 1 A . scaffold3898 ReadM SNP 0007.scaffold00024 1702285 1 A C - ReadM SNP 0007.scaffold00024 1702337 1 C T - ReadM SNP 0007.scaffold00024 1702697 1 T C - ReadM SNP 0007.scaffold00024 1702800 1 C G - ReadM SNP 0007.scaffold00024 1702831 1 T C - ReadM SNP 0007.scaffold00024 1702981 1 A G - ReadM SNP 0007.scaffold00024 1703162 1 T C - ReadM SNP 0007.scaffold00024 1703174 1 T C - ReadM SNP 0007.scaffold00024 1703347 1 A G - ReadM SNP 0007.scaffold00024 1704040 1 C T - ReadM SNP 0007.scaffold00024 1704130 1 C T - ReadM SNP 0007.scaffold00024 1704274 1 C G - ReadM SNP 0007.scaffold00024 1704461 1 A G - Both SNP 0007.scaffold00024 1704643 1 A G scaffold3898 Both SNP 0007.scaffold00024 1704742 1 A G scaffold3898 Both SNP 0007.scaffold00024 1704771 1 A G scaffold3898 Both SNP 0007.scaffold00024 1704852 1 G A scaffold3898 Both SNP 0007.scaffold00024 1704885 1 A C scaffold3898 Both SNP 0007.scaffold00024 1704920 1 T C scaffold3898 Both SNP 0007.scaffold00024 1705097 1 C T scaffold3898 Both INDEL 0007.scaffold00024 1705172 1 T . scaffold3898 Both SNP 0007.scaffold00024 1705217 1 T A scaffold3898 Both SNP 0007.scaffold00024 1705258 1 T C scaffold3898 Both SNP 0007.scaffold00024 1705355 1 A G scaffold3898 Both SNP 0007.scaffold00024 1705385 1 T C scaffold3898 Both INDEL 0007.scaffold00024 1705697 1 T . scaffold3898 Both SNP 0007.scaffold00024 1705797 1 T C scaffold3898 Both SNP 0007.scaffold00024 1705917 1 G A scaffold3898 Both SNP 0007.scaffold00024 1705933 1 T G scaffold3898 Both SNP 0007.scaffold00024 1706313 1 C A scaffold3898 Both SNP 0007.scaffold00024 1706382 1 C T scaffold3898 Both SNP 0007.scaffold00024 1706519 1 G A scaffold3898 Both SNP 0007.scaffold00024 1707025 1 T C scaffold3898 Both SNP 0007.scaffold00024 1707295 1 C G scaffold3898 Both SNP 0007.scaffold00024 1707324 1 A G scaffold3898 Both INDEL 0007.scaffold00024 1707535 1 T . scaffold3898 ScafM SNP 0007.scaffold00024 1707629 1 T G scaffold3898 Both SNP 0007.scaffold00024 1707633 1 T C scaffold3898 ScafM SNP 0007.scaffold00024 1707765 1 C T scaffold3898 ScafM INDEL 0007.scaffold00024 1707766 1 . T scaffold3898 ScafM INDEL 0007.scaffold00024 1707768 15 ............... CTTTCTTTTCCTTCT scaffold3898 ScafM SNP 0007.scaffold00024 1707787 1 T C scaffold3898 ScafM SNP 0007.scaffold00024 1708149 1 C T scaffold3898 ScafM SNP 0007.scaffold00024 1708214 1 A T scaffold3898 ScafM INDEL 0007.scaffold00024 1708399 2 .. AT scaffold3898 ScafM SNP 0007.scaffold00024 1708466 1 A T scaffold3898 ScafM INDEL 0007.scaffold00024 1708493 27 ........................... TATATAATCAATAATAATATTTTATGT scaffold3898 ScafM INDEL 0007.scaffold00024 1708525 1 A . scaffold3898 ScafM SNP 0007.scaffold00024 1708634 1 A T scaffold3898 Both SNP 0007.scaffold00024 1708680 1 T A scaffold3898 ScafM INDEL 0007.scaffold00024 1708950 1 . A scaffold3898 ReadM SNP 0007.scaffold00024 1709031 1 T C - ReadM SNP 0007.scaffold00024 1709300 1 G T - Both SNP 0007.scaffold00024 1709392 1 C T scaffold3898 ReadM INDEL 0007.scaffold00024 1709560 2 AT .. - ReadM INDEL 0007.scaffold00024 1709561 2 TT .. - ReadM SNP 0007.scaffold00024 1709586 1 A G - Both SNP 0007.scaffold00024 1709756 1 C G scaffold3898 ScafM SNP 0007.scaffold00024 1709877 2 TA GT scaffold3898 Both SNP 0007.scaffold00024 1709960 1 T G scaffold3898 Both SNP 0007.scaffold00024 1710106 1 T C scaffold3898 Both INDEL 0007.scaffold00024 1710128 1 . A scaffold3898 Both SNP 0007.scaffold00024 1710232 1 T C scaffold3898 ScafM SNP 0007.scaffold00024 1710250 1 C A scaffold3898 Both SNP 0007.scaffold00024 1710334 1 A G scaffold3898 Both SNP 0007.scaffold00024 1710454 1 T C scaffold3898 Both SNP 0007.scaffold00024 1710700 1 C T scaffold3898 Both SNP 0007.scaffold00024 1710716 1 C T scaffold3898 Both SNP 0007.scaffold00024 1710743 1 G A scaffold3898 ReadM SNP 0007.scaffold00024 1711028 1 A G - Both SNP 0007.scaffold00024 1711341 1 C T scaffold3898 ReadM SNP 0007.scaffold00024 1711435 1 T C - ReadM SNP 0007.scaffold00024 1711614 1 C T - ReadM SNP 0007.scaffold00024 1711740 1 T C - ReadM SNP 0007.scaffold00024 1711781 1 T C - ReadM SNP 0007.scaffold00024 1711807 1 T C - ReadM SNP 0007.scaffold00024 1711957 1 G A - Both SNP 0007.scaffold00024 1712127 1 A G scaffold3898 Both SNP 0007.scaffold00024 1712522 1 A G scaffold3898 Both SNP 0007.scaffold00024 1712545 1 T G scaffold3898 Both SNP 0007.scaffold00024 1712589 1 C T scaffold3898 ScafM INDEL 0007.scaffold00024 1712641 34 GATTCCATAGAAAAATGTACGGAAGAAGCTACAC .................................. scaffold3898 Both SNP 0007.scaffold00024 1712734 1 C T scaffold3898 Both SNP 0007.scaffold00024 1712800 1 T A scaffold3898 Both SNP 0007.scaffold00024 1713059 1 C T scaffold3898 ReadM INDEL 0007.scaffold00024 1713102 1 C . - ReadM SNP 0007.scaffold00024 1713160 1 C T - ReadM SNP 0007.scaffold00024 1713372 1 G T - ReadM SNP 0007.scaffold00024 1713457 1 G A - ReadM SNP 0007.scaffold00024 1713727 1 C T - ReadM SNP 0007.scaffold00024 1713906 1 T C - ReadM SNP 0007.scaffold00024 1713947 1 T A - ReadM SNP 0007.scaffold00024 1714037 1 C T - ReadM SNP 0007.scaffold00024 1714142 1 A G - ReadM SNP 0007.scaffold00024 1714201 1 A T - Both SNP 0007.scaffold00024 1714746 1 C T scaffold3898 Both SNP 0007.scaffold00024 1714748 1 A G scaffold3898 ReadM SNP 0007.scaffold00024 1715411 1 T C - ReadM SNP 0007.scaffold00024 1715641 1 C A - ReadM SNP 0007.scaffold00024 1715975 1 A C - Both SNP 0007.scaffold00024 1716107 1 T C scaffold3898 ReadM INDEL 0007.scaffold00024 1716494 3 AAC ... - ReadM SNP 0007.scaffold00024 1716572 1 C T - ReadM SNP 0007.scaffold00024 1716681 1 T C - ReadM SNP 0007.scaffold00024 1716737 1 A C - Both SNP 0007.scaffold00024 1716832 1 G C scaffold3898 ReadM SNP 0007.scaffold00024 1717586 1 A T - ReadM SNP 0007.scaffold00024 1718134 1 T A - ReadM SNP 0007.scaffold00024 1718274 1 G A - ReadM SNP 0007.scaffold00024 1718357 1 C T - ReadM SNP 0007.scaffold00024 1719652 1 C T - ScafM SNP 0007.scaffold00024 1719705 1 T C scaffold3571 ScafM SNP 0007.scaffold00024 1719709 1 C T scaffold3571 ScafM SNP 0007.scaffold00024 1719727 1 A G scaffold3571 ScafM SNP 0007.scaffold00024 1719861 1 G A scaffold3571 ScafM SNP 0007.scaffold00024 1719975 1 C A scaffold3571 ScafM SNP 0007.scaffold00024 1719985 1 C T scaffold3571 ScafM SNP 0007.scaffold00024 1720016 1 G C scaffold3571 ScafM SNP 0007.scaffold00024 1720040 1 C T scaffold3571 ScafM SNP 0007.scaffold00024 1720059 1 G A scaffold3571 ScafM SNP 0007.scaffold00024 1720062 1 C A scaffold3571 ScafM SNP 0007.scaffold00024 1720071 1 G A scaffold3571 ScafM SNP 0007.scaffold00024 1720075 1 G C scaffold3571 ScafM SNP 0007.scaffold00024 1720154 1 G A scaffold5439 ScafM SNP 0007.scaffold00024 1720195 1 A C scaffold5439 ScafM SNP 0007.scaffold00024 1720217 1 C T scaffold5439 ScafM SNP 0007.scaffold00024 1720253 1 G C scaffold5439 ScafM SNP 0007.scaffold00024 1720266 1 G A scaffold5439 ScafM SNP 0007.scaffold00024 1720349 1 T C scaffold5439 ScafM SNP 0007.scaffold00024 1720355 1 G C scaffold5439 ScafM SNP 0007.scaffold00024 1720358 1 T C scaffold5439 ScafM INDEL 0007.scaffold00024 1720484 1 . C scaffold5439 ScafM SNP 0007.scaffold00024 1720490 1 A G scaffold5439 ScafM SNP 0007.scaffold00024 1720559 1 C G scaffold5439 ScafM INDEL 0007.scaffold00024 1720571 3 ... CTT scaffold5439 ScafM INDEL 0007.scaffold00024 1720595 11 GTTTTTTTTTT ........... scaffold5439 ScafM SNP 0007.scaffold00024 1720643 1 C T scaffold5439 ScafM SNP 0007.scaffold00024 1720736 1 C T scaffold5439 ReadM INDEL 0007.scaffold00024 1720852 2 .. AT - ScafM SNP 0007.scaffold00024 1720999 1 C T scaffold2813 ScafM INDEL 0007.scaffold00024 1721040 24 ........................ ATGATGTTGTCTCATATTATTATG scaffold2813 ScafM INDEL 0007.scaffold00024 1721044 42 .......................................... GTGCACCCTTGGGCTTAAAGATGTAGGTTCAAGTTCTTGACG scaffold2813 ReadM SNP 0007.scaffold00024 1721045 1 A C - ScafM INDEL 0007.scaffold00024 1721045 1 . C scaffold2813 Both SNP 0007.scaffold00024 1721296 1 C G scaffold4808 ScafM SNP 0007.scaffold00024 1721589 1 G C scaffold4808 ScafM INDEL 0007.scaffold00024 1721627 6 ACCATC ...... scaffold4808 ScafM INDEL 0007.scaffold00024 1721652 18 TAGGATTGTGGTTAATGA .................. scaffold4808 ScafM SNP 0007.scaffold00024 1721687 1 T A scaffold4808 ScafM SNP 0007.scaffold00024 1721721 1 T A scaffold4808 ScafM INDEL 0007.scaffold00024 1721868 1 T . scaffold4808 ScafM SNP 0007.scaffold00024 1722319 1 C A scaffold3898 ReadM SNP 0007.scaffold00024 1722808 1 G T - ReadM SNP 0007.scaffold00024 1722884 1 A G - ReadM SNP 0007.scaffold00024 1722972 1 C T - ReadM SNP 0007.scaffold00024 1722975 1 A G - Both SNP 0007.scaffold00024 1723247 1 C G scaffold3898 ReadM SNP 0007.scaffold00024 1723395 1 C T - ReadM SNP 0007.scaffold00024 1723515 1 T G - ReadM SNP 0007.scaffold00024 1723944 1 G A - ReadM SNP 0007.scaffold00024 1723997 1 T G - ReadM SNP 0007.scaffold00024 1724242 1 C T - ReadM SNP 0007.scaffold00024 1724633 1 G C - ReadM SNP 0007.scaffold00024 1724682 1 T A - ScafM SNP 0007.scaffold00024 1724977 1 C T scaffold3898 ScafM SNP 0007.scaffold00024 1725084 1 C T scaffold3898 ScafM SNP 0007.scaffold00024 1725101 1 G A scaffold3898 ScafM SNP 0007.scaffold00024 1725233 2 CG AT scaffold3898 Both SNP 0007.scaffold00024 1725523 1 C T scaffold3898 Both SNP 0007.scaffold00024 1725553 1 T A scaffold3898 ReadM SNP 0007.scaffold00024 1725630 1 T G - ReadM SNP 0007.scaffold00024 1725665 1 G A - ReadM SNP 0007.scaffold00024 1725700 1 T A - ReadM SNP 0007.scaffold00024 1725775 1 G A - ReadM SNP 0007.scaffold00024 1725912 1 T G - ReadM SNP 0007.scaffold00024 1725966 1 C T - ReadM SNP 0007.scaffold00024 1726011 1 A T - ReadM SNP 0007.scaffold00024 1726404 1 T C - ReadM SNP 0007.scaffold00024 1726566 1 C A - ReadM SNP 0007.scaffold00024 1726922 1 T C - ReadM SNP 0007.scaffold00024 1726971 1 C T - ReadM SNP 0007.scaffold00024 1727166 1 G A - ReadM SNP 0007.scaffold00024 1727169 1 A T - ReadM SNP 0007.scaffold00024 1727180 1 A G - ReadM SNP 0007.scaffold00024 1727432 1 A G - ReadM SNP 0007.scaffold00024 1727460 1 G T - ReadM SNP 0007.scaffold00024 1727516 1 T G - ReadM SNP 0007.scaffold00024 1727547 1 C A - ReadM SNP 0007.scaffold00024 1727586 1 C T - ReadM INDEL 0007.scaffold00024 1727913 2 GT .. - ReadM INDEL 0007.scaffold00024 1728743 1 G . - ReadM SNP 0007.scaffold00024 1731196 1 G T - ReadM SNP 0007.scaffold00024 1731247 1 A G - ReadM SNP 0007.scaffold00024 1731366 1 G A - ReadM SNP 0007.scaffold00024 1731485 1 C A - ReadM INDEL 0007.scaffold00024 1731556 1 T . - ReadM SNP 0007.scaffold00024 1731611 1 C T - ReadM SNP 0007.scaffold00024 1731614 1 G C - ReadM SNP 0007.scaffold00024 1731991 1 T C - ReadM INDEL 0007.scaffold00024 1732198 1 . A - ReadM SNP 0007.scaffold00024 1732283 1 G A - ReadM SNP 0007.scaffold00024 1732383 1 C T - ReadM SNP 0007.scaffold00024 1732448 1 G A - ReadM SNP 0007.scaffold00024 1732470 1 T G - ReadM SNP 0007.scaffold00024 1732616 1 G C - ReadM SNP 0007.scaffold00024 1732781 1 G T - ReadM SNP 0007.scaffold00024 1732962 1 C A - ReadM SNP 0007.scaffold00024 1733038 1 T C - ReadM SNP 0007.scaffold00024 1733083 2 AA GT - ScafM INDEL 0007.scaffold00024 1733335 1 . T scaffold10185 ReadM SNP 0007.scaffold00024 1734031 1 G T - ReadM SNP 0007.scaffold00024 1734479 1 T C - ReadM SNP 0007.scaffold00024 1734483 1 C T - ReadM SNP 0007.scaffold00024 1735264 1 A G - ReadM SNP 0007.scaffold00024 1735301 1 C T - ReadM SNP 0007.scaffold00024 1735437 1 T A - ReadM SNP 0007.scaffold00024 1735507 1 A T - ReadM SNP 0007.scaffold00024 1735641 1 C A - ReadM SNP 0007.scaffold00024 1735831 1 T A - ReadM SNP 0007.scaffold00024 1735899 1 G C - ReadM INDEL 0007.scaffold00024 1736011 1 . T - ReadM SNP 0007.scaffold00024 1736098 1 T C - ReadM SNP 0007.scaffold00024 1736276 1 G A - ReadM SNP 0007.scaffold00024 1736407 1 G A - ReadM SNP 0007.scaffold00024 1736490 1 A G - ReadM SNP 0007.scaffold00024 1736495 1 C T - ReadM SNP 0007.scaffold00024 1736661 1 T G - ReadM SNP 0007.scaffold00024 1736696 1 T C - ReadM SNP 0007.scaffold00024 1736857 1 G C - ReadM SNP 0007.scaffold00024 1738843 1 A C - ReadM SNP 0007.scaffold00024 1738948 1 C T - ReadM SNP 0007.scaffold00024 1738997 1 T C - ReadM SNP 0007.scaffold00024 1739071 1 C T - ReadM SNP 0007.scaffold00024 1739181 1 T A - ReadM SNP 0007.scaffold00024 1739567 1 A G - ReadM SNP 0007.scaffold00024 1739673 1 T C - ReadM SNP 0007.scaffold00024 1739750 1 T A - ReadM SNP 0007.scaffold00024 1739817 1 G A - ReadM SNP 0007.scaffold00024 1739902 1 A G - ReadM SNP 0007.scaffold00024 1739928 1 A G - ReadM SNP 0007.scaffold00024 1739930 1 T G - ReadM SNP 0007.scaffold00024 1739965 1 T A - ReadM SNP 0007.scaffold00024 1740053 1 C A - ReadM SNP 0007.scaffold00024 1740443 1 G C - ReadM SNP 0007.scaffold00024 1740523 1 T C - ReadM INDEL 0007.scaffold00024 1740857 1 . T - ReadM SNP 0007.scaffold00024 1742485 1 A G - ReadM SNP 0007.scaffold00024 1742791 1 A C - ReadM SNP 0007.scaffold00024 1742881 1 T C - ReadM SNP 0007.scaffold00024 1742900 1 G A - ReadM SNP 0007.scaffold00024 1745263 1 C T - ReadM INDEL 0007.scaffold00024 1745266 1 . G - ReadM SNP 0007.scaffold00024 1745359 1 T C - ReadM SNP 0007.scaffold00024 1745370 1 G A - ReadM SNP 0007.scaffold00024 1745492 1 A G - ReadM SNP 0007.scaffold00024 1745656 1 T C - ReadM SNP 0007.scaffold00024 1745751 1 A C - ReadM INDEL 0007.scaffold00024 1746362 1 G . - ReadM SNP 0007.scaffold00024 1746507 1 T C - ReadM INDEL 0007.scaffold00024 1746541 1 . A - ReadM INDEL 0007.scaffold00024 1746549 2 .. AT - ReadM SNP 0007.scaffold00024 1746582 1 A G - ReadM SNP 0007.scaffold00024 1746625 1 C T - ReadM SNP 0007.scaffold00024 1746740 1 T C - ReadM SNP 0007.scaffold00024 1747241 1 G T - ScafM SNP 0007.scaffold00024 1747662 1 A G scaffold10185 ScafM SNP 0007.scaffold00024 1747671 1 A C scaffold10185 ReadM SNP 0007.scaffold00024 1748698 1 T G - ReadM SNP 0007.scaffold00024 1748756 1 C T - ReadM SNP 0007.scaffold00024 1748798 1 C T - ReadM SNP 0007.scaffold00024 1748949 1 T C - ReadM SNP 0007.scaffold00024 1748960 1 A C - ReadM SNP 0007.scaffold00024 1749248 1 C G - ReadM SNP 0007.scaffold00024 1749419 1 A C - ReadM SNP 0007.scaffold00024 1750045 1 G A - ReadM SNP 0007.scaffold00024 1750268 1 G T - ReadM SNP 0007.scaffold00024 1750275 1 C T - Both SNP 0007.scaffold00024 1750375 1 T C scaffold10185 Both SNP 0007.scaffold00024 1750804 1 C T scaffold10185 ScafM INDEL 0007.scaffold00024 1750833 1 . T scaffold10185 ReadM SNP 0007.scaffold00024 1751083 1 G A - ScafM SNP 0007.scaffold00024 1751368 1 C T scaffold10185 Both SNP 0007.scaffold00024 1751371 1 C T scaffold10185 ReadM SNP 0007.scaffold00024 1751587 1 G C - ReadM SNP 0007.scaffold00024 1751659 1 C T - ReadM SNP 0007.scaffold00024 1751744 1 T C - ReadM SNP 0007.scaffold00024 1751764 1 C T - ReadM SNP 0007.scaffold00024 1752009 1 C T - ReadM SNP 0007.scaffold00024 1752358 1 A C - ReadM SNP 0007.scaffold00024 1752378 1 C T - ScafM INDEL 0007.scaffold00024 1752482 1 . T scaffold21518 ScafM INDEL 0007.scaffold00024 1752485 1 . T scaffold21518 ScafM SNP 0007.scaffold00024 1752523 1 T A scaffold21518 ScafM SNP 0007.scaffold00024 1752536 1 C A scaffold21518 ReadM SNP 0007.scaffold00024 1752567 1 C A - ReadM SNP 0007.scaffold00024 1752569 1 G A - ReadM SNP 0007.scaffold00024 1752791 1 G A - ReadM SNP 0007.scaffold00024 1752814 1 T C - Both SNP 0007.scaffold00024 1752851 1 G A scaffold21518 Both SNP 0007.scaffold00024 1753627 1 T A scaffold21518 ScafM SNP 0007.scaffold00024 1753757 1 T A scaffold21518 ScafM SNP 0007.scaffold00024 1754089 1 C T scaffold21518 ScafM SNP 0007.scaffold00024 1754112 1 T C scaffold21518 ScafM SNP 0007.scaffold00024 1754183 1 T C scaffold21518 ScafM SNP 0007.scaffold00024 1754347 1 G C scaffold21518 ReadM INDEL 0007.scaffold00024 1755353 1 C . - ReadM SNP 0007.scaffold00024 1755486 1 G A - ReadM SNP 0007.scaffold00024 1756555 1 T A - ReadM SNP 0007.scaffold00024 1756609 1 G T - ReadM SNP 0007.scaffold00024 1756781 1 C T - ReadM SNP 0007.scaffold00024 1756883 1 T C - ReadM SNP 0007.scaffold00024 1756938 1 G A - ReadM SNP 0007.scaffold00024 1756993 1 T A - ReadM SNP 0007.scaffold00024 1757148 1 G A - ReadM SNP 0007.scaffold00024 1757221 1 C G - ReadM SNP 0007.scaffold00024 1757333 1 A G - ReadM SNP 0007.scaffold00024 1757412 1 C T - ReadM SNP 0007.scaffold00024 1757823 1 G T - ReadM SNP 0007.scaffold00024 1758419 1 C T - ReadM SNP 0007.scaffold00024 1758562 1 A G - ReadM SNP 0007.scaffold00024 1758568 1 A G - ReadM SNP 0007.scaffold00024 1758572 1 C G - ReadM SNP 0007.scaffold00024 1758765 1 T G - ReadM SNP 0007.scaffold00024 1758878 1 T A - ReadM SNP 0007.scaffold00024 1759206 1 C T - ReadM SNP 0007.scaffold00024 1759241 1 T C - ReadM SNP 0007.scaffold00024 1759352 1 A T - ReadM SNP 0007.scaffold00024 1759441 1 G T - ReadM SNP 0007.scaffold00024 1759498 1 A C - ReadM SNP 0007.scaffold00024 1759532 1 C T - ReadM SNP 0007.scaffold00024 1759666 1 T C - ReadM SNP 0007.scaffold00024 1759954 1 C T - ReadM SNP 0007.scaffold00024 1760178 1 A T - ReadM SNP 0007.scaffold00024 1760219 1 C A - ReadM INDEL 0007.scaffold00024 1760786 1 A . - ReadM SNP 0007.scaffold00024 1760949 1 T C - ReadM SNP 0007.scaffold00024 1761479 1 T A - ReadM SNP 0007.scaffold00024 1761642 1 T G - ReadM INDEL 0007.scaffold00024 1761998 1 A . - ReadM SNP 0007.scaffold00024 1762190 1 C A - ReadM SNP 0007.scaffold00024 1762316 1 C T - ReadM SNP 0007.scaffold00024 1762362 1 C T - ReadM INDEL 0007.scaffold00024 1762494 1 A . - ReadM SNP 0007.scaffold00024 1762641 1 G C - ReadM SNP 0007.scaffold00024 1762750 1 T C - ReadM SNP 0007.scaffold00024 1763008 1 C G - ReadM SNP 0007.scaffold00024 1763254 1 T C - ReadM INDEL 0007.scaffold00024 1763322 1 . A - ReadM SNP 0007.scaffold00024 1763552 1 C G - ReadM INDEL 0007.scaffold00024 1765475 1 . T - ReadM SNP 0007.scaffold00024 1765556 1 A G - ReadM SNP 0007.scaffold00024 1765583 1 A G - ReadM SNP 0007.scaffold00024 1765762 1 A T - ReadM SNP 0007.scaffold00024 1765807 1 G A - ReadM SNP 0007.scaffold00024 1765928 1 A C - ReadM SNP 0007.scaffold00024 1765970 1 A G - ReadM SNP 0007.scaffold00024 1765984 1 T C - ReadM SNP 0007.scaffold00024 1766072 1 T G - ReadM SNP 0007.scaffold00024 1766273 1 C T - ScafM SNP 0007.scaffold00024 1767491 1 T C scaffold10725 ReadM SNP 0007.scaffold00024 1769206 1 C A - ReadM SNP 0007.scaffold00024 1769240 1 A G - ReadM SNP 0007.scaffold00024 1769426 1 A G - ReadM SNP 0007.scaffold00024 1769776 1 T C - ReadM SNP 0007.scaffold00024 1770417 1 G A - ReadM SNP 0007.scaffold00024 1772288 1 A G - ReadM SNP 0007.scaffold00024 1772499 1 A G - ReadM SNP 0007.scaffold00024 1772582 1 A G - ReadM SNP 0007.scaffold00024 1772641 1 G A - ReadM SNP 0007.scaffold00024 1772812 1 T G - ReadM SNP 0007.scaffold00024 1772847 1 G A - ReadM SNP 0007.scaffold00024 1772989 1 C A - ReadM SNP 0007.scaffold00024 1773203 1 C G - ReadM SNP 0007.scaffold00024 1773277 1 A T - ScafM SNP 0007.scaffold00024 1773435 1 A G scaffold3867 ScafM SNP 0007.scaffold00024 1773486 1 C T scaffold3867 Both SNP 0007.scaffold00024 1773490 1 T C scaffold3867 ReadM SNP 0007.scaffold00024 1773899 1 G A - ReadM SNP 0007.scaffold00024 1774638 1 A C - ReadM SNP 0007.scaffold00024 1774658 1 C T - ReadM SNP 0007.scaffold00024 1775084 1 C T - ReadM SNP 0007.scaffold00024 1775526 1 A G - ReadM SNP 0007.scaffold00024 1775838 1 A G - ReadM SNP 0007.scaffold00024 1775859 1 G T - ReadM SNP 0007.scaffold00024 1777138 1 A G - ReadM SNP 0007.scaffold00024 1777326 1 C A - ReadM SNP 0007.scaffold00024 1777432 1 G A - ReadM SNP 0007.scaffold00024 1777464 1 T C - ReadM SNP 0007.scaffold00024 1779275 1 G C - ReadM SNP 0007.scaffold00024 1779284 1 G A - ReadM SNP 0007.scaffold00024 1779287 1 C T - ReadM SNP 0007.scaffold00024 1780042 1 G C - Both SNP 0007.scaffold00024 1781048 1 C T scaffold3867 Both SNP 0007.scaffold00024 1781212 1 T C scaffold3867 ReadM INDEL 0007.scaffold00024 1781396 1 T . - ReadM SNP 0007.scaffold00024 1781627 1 A G - ReadM SNP 0007.scaffold00024 1781660 1 A G - ReadM SNP 0007.scaffold00024 1781696 1 G A - ReadM SNP 0007.scaffold00024 1782132 1 A T - ReadM SNP 0007.scaffold00024 1782145 1 C T - ReadM INDEL 0007.scaffold00024 1782193 1 T . - ReadM SNP 0007.scaffold00024 1782392 1 A C - ReadM SNP 0007.scaffold00024 1782409 1 T C - ReadM SNP 0007.scaffold00024 1782534 1 A T - ReadM SNP 0007.scaffold00024 1782756 1 C G - ReadM SNP 0007.scaffold00024 1782804 1 G A - ReadM SNP 0007.scaffold00024 1783101 1 A G - ReadM SNP 0007.scaffold00024 1783470 1 G T - ReadM SNP 0007.scaffold00024 1783523 1 T C - ReadM SNP 0007.scaffold00024 1783530 1 T A - ReadM SNP 0007.scaffold00024 1783639 1 A T - ReadM SNP 0007.scaffold00024 1783838 1 C G - ReadM SNP 0007.scaffold00024 1783874 1 A T - ReadM SNP 0007.scaffold00024 1784106 1 A G - ReadM INDEL 0007.scaffold00024 1784291 2 TT .. - ReadM SNP 0007.scaffold00024 1784493 1 T G - ReadM SNP 0007.scaffold00024 1784524 1 A G - ReadM SNP 0007.scaffold00024 1784555 1 G C - ReadM SNP 0007.scaffold00024 1784957 1 C T - ReadM SNP 0007.scaffold00024 1785143 1 G A - Both SNP 0007.scaffold00024 1785517 1 G A scaffold3867 Both SNP 0007.scaffold00024 1785564 1 C A scaffold3867 ReadM SNP 0007.scaffold00024 1785854 1 C A - ReadM SNP 0007.scaffold00024 1786110 1 A G - ReadM SNP 0007.scaffold00024 1786318 1 T C - ReadM SNP 0007.scaffold00024 1786360 1 G A - ReadM SNP 0007.scaffold00024 1786461 1 T G - ReadM SNP 0007.scaffold00024 1786565 1 T A - ReadM SNP 0007.scaffold00024 1786623 1 A G - ReadM SNP 0007.scaffold00024 1786820 1 G T - ReadM SNP 0007.scaffold00024 1786854 1 G T - ReadM SNP 0007.scaffold00024 1787222 1 G A - ReadM SNP 0007.scaffold00024 1787378 1 C A - ReadM SNP 0007.scaffold00024 1787520 1 G A - ReadM SNP 0007.scaffold00024 1787550 1 G A - ReadM SNP 0007.scaffold00024 1787655 1 G A - ReadM SNP 0007.scaffold00024 1787675 1 G A - ReadM SNP 0007.scaffold00024 1787782 1 T A - ReadM SNP 0007.scaffold00024 1787833 1 G A - ReadM SNP 0007.scaffold00024 1787915 1 C A - ReadM SNP 0007.scaffold00024 1787959 1 G A - ReadM SNP 0007.scaffold00024 1788110 1 G T - ReadM SNP 0007.scaffold00024 1788118 1 T C - ReadM SNP 0007.scaffold00024 1788281 1 G C - ReadM SNP 0007.scaffold00024 1788310 1 A G - ReadM SNP 0007.scaffold00024 1788393 1 C T - ReadM SNP 0007.scaffold00024 1788428 1 C G - ReadM SNP 0007.scaffold00024 1788848 1 T C - ReadM SNP 0007.scaffold00024 1788902 1 C T - ReadM SNP 0007.scaffold00024 1789193 1 G A - ReadM SNP 0007.scaffold00024 1789214 1 A G - ScafM SNP 0007.scaffold00024 1789610 1 T G scaffold3867 ScafM SNP 0007.scaffold00024 1790132 1 T C scaffold3867 ScafM SNP 0007.scaffold00024 1790180 1 G C scaffold3867 Both SNP 0007.scaffold00024 1790589 1 T C scaffold3867 ScafM INDEL 0007.scaffold00024 1790633 4 TCGC .... scaffold3867 ScafM SNP 0007.scaffold00024 1790650 1 G T scaffold3867 ReadM SNP 0007.scaffold00024 1791115 1 A G - ReadM SNP 0007.scaffold00024 1791156 1 T C - ReadM SNP 0007.scaffold00024 1791177 1 G A - ReadM INDEL 0007.scaffold00024 1791565 2 AT .. - ReadM SNP 0007.scaffold00024 1791790 1 C A - Both SNP 0007.scaffold00024 1792434 1 T A scaffold3867 Both SNP 0007.scaffold00024 1792464 1 T A scaffold3867 ScafM SNP 0007.scaffold00024 1792618 1 T G scaffold3867 ScafM SNP 0007.scaffold00024 1792650 1 A T scaffold3867 ScafM SNP 0007.scaffold00024 1792674 1 G A scaffold3867 Both SNP 0007.scaffold00024 1792691 1 A G scaffold3867 Both SNP 0007.scaffold00024 1792816 1 A G scaffold3867 ScafM SNP 0007.scaffold00024 1792965 1 C A scaffold3867 Both SNP 0007.scaffold00024 1793185 1 C T scaffold3867 Both INDEL 0007.scaffold00024 1793189 1 G . scaffold3867 Both SNP 0007.scaffold00024 1793198 1 G A scaffold3867 Both SNP 0007.scaffold00024 1793264 1 A G scaffold3867 Both SNP 0007.scaffold00024 1793299 1 T C scaffold3867 ScafM SNP 0007.scaffold00024 1793384 1 A G scaffold3867 Both SNP 0007.scaffold00024 1793460 1 T A scaffold3867 Both SNP 0007.scaffold00024 1793462 1 G A scaffold3867 Both SNP 0007.scaffold00024 1793635 1 C T scaffold3867 Both SNP 0007.scaffold00024 1793661 1 A G scaffold3867 Both SNP 0007.scaffold00024 1793671 1 A T scaffold3867 Both SNP 0007.scaffold00024 1793712 1 C T scaffold3867 Both SNP 0007.scaffold00024 1793946 1 C G scaffold3867 Both SNP 0007.scaffold00024 1794280 1 A C scaffold3867 Both SNP 0007.scaffold00024 1794294 1 A T scaffold3867 ScafM SNP 0007.scaffold00024 1794495 1 A G scaffold3867 Both SNP 0007.scaffold00024 1794776 1 C A scaffold3867 ReadM INDEL 0007.scaffold00024 1795129 1 A . - Both INDEL 0007.scaffold00024 1795131 1 T . scaffold3867 ScafM SNP 0007.scaffold00024 1795545 2 TG CT scaffold3867 ReadM SNP 0007.scaffold00024 1795546 1 G T - Both INDEL 0007.scaffold00024 1795581 1 A . scaffold3867 Both SNP 0007.scaffold00024 1795639 1 A G scaffold3867 ScafM SNP 0007.scaffold00024 1795834 2 TT AA scaffold3867 ScafM SNP 0007.scaffold00024 1795974 1 T C scaffold3867 ScafM INDEL 0007.scaffold00024 1796022 2 .. TT scaffold3867 Both SNP 0007.scaffold00024 1796086 1 A G scaffold3867 Both SNP 0007.scaffold00024 1796228 1 G T scaffold3867 Both SNP 0007.scaffold00024 1796342 1 C T scaffold3867 Both SNP 0007.scaffold00024 1796391 1 G T scaffold3867 ScafM SNP 0007.scaffold00024 1796446 1 T C scaffold3867 Both SNP 0007.scaffold00024 1796479 1 G T scaffold3867 ScafM SNP 0007.scaffold00024 1796497 1 T C scaffold3867 Both SNP 0007.scaffold00024 1796503 1 A G scaffold3867 Both SNP 0007.scaffold00024 1796538 1 C T scaffold3867 ScafM INDEL 0007.scaffold00024 1796597 19 TCTAGAATTCTTAGCTAGC ................... scaffold3867 ScafM SNP 0007.scaffold00024 1796624 1 T C scaffold3867 Both SNP 0007.scaffold00024 1796662 1 C T scaffold3867 ScafM INDEL 0007.scaffold00024 1797045 23 ....................... CACGCAAACTTTTGCTTGGTTTC scaffold3867 Both SNP 0007.scaffold00024 1797490 1 A T scaffold3867 Both SNP 0007.scaffold00024 1797548 1 A C scaffold3867 Both SNP 0007.scaffold00024 1797603 1 G A scaffold3867 Both SNP 0007.scaffold00024 1797760 1 A G scaffold3867 Both INDEL 0007.scaffold00024 1797771 1 T . scaffold3867 ReadM SNP 0007.scaffold00024 1798183 1 C G - ReadM SNP 0007.scaffold00024 1798353 1 G A - ReadM SNP 0007.scaffold00024 1798544 1 A G - ReadM SNP 0007.scaffold00024 1798751 1 G C - ReadM SNP 0007.scaffold00024 1798754 1 T C - ReadM SNP 0007.scaffold00024 1799014 1 A T - ReadM SNP 0007.scaffold00024 1799084 1 G A - ReadM SNP 0007.scaffold00024 1799112 1 T C - ScafM INDEL 0007.scaffold00024 1799514 1 . A scaffold3867 ReadM INDEL 0007.scaffold00024 1799534 1 . A - Both SNP 0007.scaffold00024 1799677 1 G C scaffold3867 Both INDEL 0007.scaffold00024 1799747 1 . T scaffold3867 Both SNP 0007.scaffold00024 1799777 1 C T scaffold3867 ScafM INDEL 0007.scaffold00024 1799920 1 . T scaffold3867 ScafM SNP 0007.scaffold00024 1800123 1 C G scaffold3867 ScafM SNP 0007.scaffold00024 1800286 1 A C scaffold3867 ScafM SNP 0007.scaffold00024 1800341 1 T G scaffold3867 ScafM SNP 0007.scaffold00024 1800603 1 A G scaffold3867 Both SNP 0007.scaffold00024 1801201 1 G A scaffold3867 Both SNP 0007.scaffold00024 1801244 1 C T scaffold3867 Both SNP 0007.scaffold00024 1801275 1 C A scaffold3867 Both SNP 0007.scaffold00024 1801308 1 T G scaffold3867 Both SNP 0007.scaffold00024 1801317 1 C A scaffold3867 Both SNP 0007.scaffold00024 1801357 1 G A scaffold3867 Both SNP 0007.scaffold00024 1801486 1 A T scaffold3867 Both SNP 0007.scaffold00024 1801586 1 G T scaffold3867 Both INDEL 0007.scaffold00024 1801664 1 . T scaffold3867 Both SNP 0007.scaffold00024 1801678 1 G A scaffold3867 Both SNP 0007.scaffold00024 1801721 1 T C scaffold3867 Both SNP 0007.scaffold00024 1801809 1 C G scaffold3867 Both SNP 0007.scaffold00024 1801943 1 C G scaffold3867 Both SNP 0007.scaffold00024 1802001 1 C A scaffold3867 Both SNP 0007.scaffold00024 1802628 1 A C scaffold3867 Both SNP 0007.scaffold00024 1802671 1 G T scaffold3867 Both SNP 0007.scaffold00024 1802705 1 C T scaffold3867 ScafM SNP 0007.scaffold00024 1802781 1 A T scaffold3867 Both SNP 0007.scaffold00024 1802879 1 G T scaffold3867 Both SNP 0007.scaffold00024 1802892 1 A T scaffold3867 Both SNP 0007.scaffold00024 1803136 1 A C scaffold3867 Both SNP 0007.scaffold00024 1803170 1 A C scaffold3867 Both SNP 0007.scaffold00024 1803383 1 A G scaffold3867 Both SNP 0007.scaffold00024 1803564 1 A C scaffold3867 Both SNP 0007.scaffold00024 1803721 1 C T scaffold3867 Both SNP 0007.scaffold00024 1803820 1 C T scaffold3867 Both INDEL 0007.scaffold00024 1803884 1 T . scaffold3867 ScafM SNP 0007.scaffold00024 1803888 1 A T scaffold3867 ScafM SNP 0007.scaffold00024 1804620 1 C T scaffold3867 ScafM INDEL 0007.scaffold00024 1804717 1 C . scaffold3867 ScafM SNP 0007.scaffold00024 1804795 1 G C scaffold3867 ScafM INDEL 0007.scaffold00024 1804828 8 ........ ATTTTGTG scaffold3867 ScafM SNP 0007.scaffold00024 1804835 1 T C scaffold3867 ReadM SNP 0007.scaffold00024 1805744 1 G A - ReadM INDEL 0007.scaffold00024 1805847 1 G . - ReadM SNP 0007.scaffold00024 1806414 1 A G - ReadM SNP 0007.scaffold00024 1806425 1 C T - ReadM SNP 0007.scaffold00024 1810100 1 C T - ReadM SNP 0007.scaffold00024 1810143 1 G A - ReadM SNP 0007.scaffold00024 1810434 1 T G - ReadM SNP 0007.scaffold00024 1810460 1 C T - ReadM SNP 0007.scaffold00024 1810707 1 C A - ReadM INDEL 0007.scaffold00024 1815362 1 . T - ReadM SNP 0007.scaffold00024 1815382 1 G A - ReadM SNP 0007.scaffold00024 1815389 1 C A - ReadM SNP 0007.scaffold00024 1815957 1 A T - ReadM SNP 0007.scaffold00024 1816124 1 C A - ReadM SNP 0007.scaffold00024 1816136 1 A C - ReadM SNP 0007.scaffold00024 1816185 1 T A - ReadM SNP 0007.scaffold00024 1816190 1 C A - ReadM SNP 0007.scaffold00024 1816683 1 A G - ReadM SNP 0007.scaffold00024 1816688 1 C A - ReadM SNP 0007.scaffold00024 1816761 1 C G - ReadM SNP 0007.scaffold00024 1816800 1 A G - ReadM SNP 0007.scaffold00024 1817451 1 C A - ReadM SNP 0007.scaffold00024 1817492 1 A G - ReadM SNP 0007.scaffold00024 1819632 1 C T - ReadM SNP 0007.scaffold00024 1819650 1 G T - ReadM SNP 0007.scaffold00024 1819701 1 A T - ScafM SNP 0007.scaffold00024 1819947 1 A G scaffold5947 ScafM SNP 0007.scaffold00024 1819961 1 A G scaffold5947 Both SNP 0007.scaffold00024 1820028 1 A G scaffold5947 ScafM SNP 0007.scaffold00024 1820054 1 A G scaffold5947 Both SNP 0007.scaffold00024 1820078 1 A C scaffold5947 Both SNP 0007.scaffold00024 1820129 1 G C scaffold5947 ScafM INDEL 0007.scaffold00024 1820158 1 A . scaffold5947 ScafM SNP 0007.scaffold00024 1820616 1 G A scaffold2793 Both SNP 0007.scaffold00024 1820619 1 A G scaffold2793 ScafM SNP 0007.scaffold00024 1820634 1 G A scaffold2793 Both SNP 0007.scaffold00024 1820640 1 C A scaffold2793 ScafM SNP 0007.scaffold00024 1820837 1 A G scaffold2793 ReadM SNP 0007.scaffold00024 1821215 1 T G - ReadM SNP 0007.scaffold00024 1821218 1 T C - ReadM SNP 0007.scaffold00024 1821905 1 T C - ReadM SNP 0007.scaffold00024 1824975 1 G T - ReadM SNP 0007.scaffold00024 1825112 1 A G - ReadM SNP 0007.scaffold00024 1826726 1 G A - ReadM SNP 0007.scaffold00024 1827108 1 C A - ReadM SNP 0007.scaffold00024 1827222 1 C A - ReadM SNP 0007.scaffold00024 1827256 1 G A - ReadM SNP 0007.scaffold00024 1827413 1 T C - ReadM SNP 0007.scaffold00024 1827765 1 T C - ReadM SNP 0007.scaffold00024 1828086 1 T A - ReadM SNP 0007.scaffold00024 1828093 1 T C - ReadM SNP 0007.scaffold00024 1828238 1 A G - ReadM SNP 0007.scaffold00024 1828248 1 G C - ReadM SNP 0007.scaffold00024 1828906 1 G A - ReadM SNP 0007.scaffold00024 1829101 1 T C - ReadM SNP 0007.scaffold00024 1829124 1 G T - ReadM SNP 0007.scaffold00024 1829142 1 G A - ReadM SNP 0007.scaffold00024 1829686 1 A G - ReadM SNP 0007.scaffold00024 1829733 1 T C - ReadM SNP 0007.scaffold00024 1829943 1 G A - ReadM SNP 0007.scaffold00024 1830118 1 C T - ReadM SNP 0007.scaffold00024 1830311 1 A G - ReadM SNP 0007.scaffold00024 1830587 1 G A - ReadM SNP 0007.scaffold00024 1830680 1 T C - ReadM SNP 0007.scaffold00024 1830879 1 C A - ReadM SNP 0007.scaffold00024 1831061 1 C T - ReadM SNP 0007.scaffold00024 1831174 1 T A - ReadM SNP 0007.scaffold00024 1831601 1 T A - ReadM SNP 0007.scaffold00024 1831634 1 G C - ReadM INDEL 0007.scaffold00024 1831654 1 . C - ReadM SNP 0007.scaffold00024 1831665 1 G A - ReadM SNP 0007.scaffold00024 1831776 1 G A - ReadM SNP 0007.scaffold00024 1831937 1 T G - ReadM SNP 0007.scaffold00024 1831998 1 A G - ReadM SNP 0007.scaffold00024 1832129 1 A G - ReadM SNP 0007.scaffold00024 1832231 1 C T - ReadM SNP 0007.scaffold00024 1832298 1 C G - ReadM SNP 0007.scaffold00024 1832318 1 C A - ReadM SNP 0007.scaffold00024 1832384 1 G T - ReadM SNP 0007.scaffold00024 1832464 1 C G - ReadM SNP 0007.scaffold00024 1832512 1 A T - ReadM SNP 0007.scaffold00024 1832531 1 C T - ReadM SNP 0007.scaffold00024 1832597 1 A T - ReadM INDEL 0007.scaffold00024 1832618 1 . A - ReadM SNP 0007.scaffold00024 1832632 1 G A - ReadM SNP 0007.scaffold00024 1832662 1 A G - ReadM SNP 0007.scaffold00024 1832718 1 G A - ReadM INDEL 0007.scaffold00024 1832769 1 C . - ReadM SNP 0007.scaffold00024 1832996 1 T C - ReadM SNP 0007.scaffold00024 1833109 1 A G - ReadM SNP 0007.scaffold00024 1833219 1 G A - ReadM SNP 0007.scaffold00024 1833413 2 CG TA - ReadM SNP 0007.scaffold00024 1833461 1 C T - ReadM SNP 0007.scaffold00024 1833505 1 G C - ReadM SNP 0007.scaffold00024 1833584 1 G A - ReadM SNP 0007.scaffold00024 1833756 1 A G - ReadM SNP 0007.scaffold00024 1833886 1 C T - ReadM SNP 0007.scaffold00024 1834055 1 T C - ReadM SNP 0007.scaffold00024 1834109 1 A G - ReadM SNP 0007.scaffold00024 1834159 1 C A - ReadM SNP 0007.scaffold00024 1834198 1 C A - ReadM SNP 0007.scaffold00024 1834641 1 T C - ReadM SNP 0007.scaffold00024 1834789 1 C G - ReadM SNP 0007.scaffold00024 1836338 1 T C - ReadM SNP 0007.scaffold00024 1837178 1 C A - ReadM INDEL 0007.scaffold00024 1837309 1 T . - ReadM SNP 0007.scaffold00024 1837444 1 C A - ReadM SNP 0007.scaffold00024 1837628 1 G A - ReadM SNP 0007.scaffold00024 1837636 1 A G - ReadM SNP 0007.scaffold00024 1837717 1 G A - ReadM SNP 0007.scaffold00024 1837832 1 C G - ReadM SNP 0007.scaffold00024 1838007 1 G T - ReadM SNP 0007.scaffold00024 1838318 1 G A - ReadM SNP 0007.scaffold00024 1838366 1 G A - ReadM SNP 0007.scaffold00024 1838895 1 T C - ReadM SNP 0007.scaffold00024 1839032 1 T C - ReadM SNP 0007.scaffold00024 1839226 1 C T - ReadM SNP 0007.scaffold00024 1839635 1 T A - ReadM SNP 0007.scaffold00024 1839654 1 A G - Both SNP 0007.scaffold00024 1839883 1 T C scaffold5947 ReadM INDEL 0007.scaffold00024 1839990 1 A . - ScafM SNP 0007.scaffold00024 1840132 1 T C scaffold5947 ScafM SNP 0007.scaffold00024 1840136 1 G T scaffold5947 ScafM SNP 0007.scaffold00024 1840154 1 A T scaffold5947 ScafM SNP 0007.scaffold00024 1840190 1 A G scaffold5947 Both SNP 0007.scaffold00024 1840329 1 T A scaffold5947 ScafM INDEL 0007.scaffold00024 1840360 4 .... TATA scaffold5947 Both SNP 0007.scaffold00024 1840486 1 C A scaffold5947 ScafM SNP 0007.scaffold00024 1840495 2 AC GT scaffold5947 ReadM SNP 0007.scaffold00024 1840567 1 T A - ScafM SNP 0007.scaffold00024 1840737 1 A T scaffold5947 Both INDEL 0007.scaffold00024 1840781 1 . G scaffold5947 Both SNP 0007.scaffold00024 1840794 1 C T scaffold5947 Both SNP 0007.scaffold00024 1840874 1 G A scaffold5947 Both SNP 0007.scaffold00024 1840883 1 G C scaffold5947 Both SNP 0007.scaffold00024 1840946 1 A C scaffold5947 Both SNP 0007.scaffold00024 1841349 1 G A scaffold5947 Both SNP 0007.scaffold00024 1841370 1 C T scaffold5947 Both SNP 0007.scaffold00024 1841456 1 G A scaffold5947 ScafM SNP 0007.scaffold00024 1841479 1 A T scaffold5947 ScafM SNP 0007.scaffold00024 1841482 1 G A scaffold5947 Both INDEL 0007.scaffold00024 1841868 1 . A scaffold5947 Both SNP 0007.scaffold00024 1841924 1 G A scaffold5947 Both SNP 0007.scaffold00024 1842185 1 C T scaffold5947 Both SNP 0007.scaffold00024 1842296 1 T G scaffold5947 Both SNP 0007.scaffold00024 1842483 1 C T scaffold5947 Both SNP 0007.scaffold00024 1842495 1 A G scaffold5947 Both SNP 0007.scaffold00024 1842723 1 T C scaffold5947 Both SNP 0007.scaffold00024 1843176 1 A G scaffold5947 Both SNP 0007.scaffold00024 1843318 1 C T scaffold5947 Both SNP 0007.scaffold00024 1843557 1 A G scaffold5947 ScafM INDEL 0007.scaffold00024 1843653 2 .. CA scaffold5947 ScafM INDEL 0007.scaffold00024 1843654 1 . T scaffold5947 ScafM SNP 0007.scaffold00024 1844161 1 A T scaffold5947 Both SNP 0007.scaffold00024 1844416 1 G C scaffold5947 ScafM SNP 0007.scaffold00024 1844648 2 CC TT scaffold5947 ReadM SNP 0007.scaffold00024 1844996 1 T C - ReadM INDEL 0007.scaffold00024 1845250 1 A . - Both SNP 0007.scaffold00024 1845328 1 T A scaffold5947 Both SNP 0007.scaffold00024 1845491 1 T C scaffold5947 Both SNP 0007.scaffold00024 1845541 1 T C scaffold5947 Both SNP 0007.scaffold00024 1845662 1 C A scaffold5947 Both SNP 0007.scaffold00024 1845672 1 T C scaffold5947 Both SNP 0007.scaffold00024 1845730 1 C T scaffold5947 ReadM SNP 0007.scaffold00024 1845752 1 T C - ReadM SNP 0007.scaffold00024 1845812 1 T C - ReadM SNP 0007.scaffold00024 1845827 1 T G - ReadM INDEL 0007.scaffold00024 1846110 2 .. GC - ReadM SNP 0007.scaffold00024 1846116 1 C T - Both SNP 0007.scaffold00024 1856216 1 G C scaffold18635 Both SNP 0007.scaffold00024 1856278 1 G A scaffold18635 ReadM SNP 0007.scaffold00024 1856584 1 A G - ReadM SNP 0007.scaffold00024 1857074 1 C T - Both SNP 0007.scaffold00024 1857390 1 G A scaffold18635 Both SNP 0007.scaffold00024 1857523 1 G T scaffold18635 ReadM SNP 0007.scaffold00024 1857929 1 G A - Both SNP 0007.scaffold00024 1858010 1 A G scaffold18635 ReadM SNP 0007.scaffold00024 1858268 1 C A - ReadM SNP 0007.scaffold00024 1858270 1 C T - ReadM SNP 0007.scaffold00024 1859025 1 A G - ReadM SNP 0007.scaffold00024 1859070 1 T A - ReadM SNP 0007.scaffold00024 1859840 1 C T - ReadM SNP 0007.scaffold00024 1860000 1 A G - ReadM SNP 0007.scaffold00024 1860140 1 A G - ReadM SNP 0007.scaffold00024 1860200 1 T A - ReadM SNP 0007.scaffold00024 1860222 1 T C - ReadM SNP 0007.scaffold00024 1860287 1 T C - ReadM SNP 0007.scaffold00024 1860347 1 G A - ReadM SNP 0007.scaffold00024 1860548 1 G T - ReadM SNP 0007.scaffold00024 1860557 1 A G - ReadM SNP 0007.scaffold00024 1860599 1 A T - ReadM SNP 0007.scaffold00024 1860701 1 A G - ReadM SNP 0007.scaffold00024 1860755 1 G A - ReadM INDEL 0007.scaffold00024 1860760 1 . T - ReadM SNP 0007.scaffold00024 1860792 1 C A - ReadM SNP 0007.scaffold00024 1860962 1 T C - ReadM SNP 0007.scaffold00024 1861153 1 T C - ReadM SNP 0007.scaffold00024 1861188 1 G A - ReadM SNP 0007.scaffold00024 1861274 1 C T - ReadM SNP 0007.scaffold00024 1861433 1 A T - ReadM SNP 0007.scaffold00024 1861450 1 T C - ReadM SNP 0007.scaffold00024 1861498 1 T G - ReadM SNP 0007.scaffold00024 1861601 1 A T - ReadM SNP 0007.scaffold00024 1861932 1 A C - ReadM SNP 0007.scaffold00024 1861974 1 T C - ReadM SNP 0007.scaffold00024 1862071 1 T A - ReadM SNP 0007.scaffold00024 1864116 1 T C - ReadM SNP 0007.scaffold00024 1864227 1 G T - ReadM SNP 0007.scaffold00024 1864301 1 G A - ReadM SNP 0007.scaffold00024 1864456 1 G A - ReadM SNP 0007.scaffold00024 1864487 1 T C - ReadM SNP 0007.scaffold00024 1864569 1 A G - ReadM SNP 0007.scaffold00024 1864645 1 C T - ReadM SNP 0007.scaffold00024 1864979 1 C T - ReadM SNP 0007.scaffold00024 1865223 1 C T - ReadM SNP 0007.scaffold00024 1865259 1 G A - ReadM SNP 0007.scaffold00024 1865304 1 T C - ReadM SNP 0007.scaffold00024 1865838 1 C T - ReadM SNP 0007.scaffold00024 1866130 1 C T - ReadM SNP 0007.scaffold00024 1866182 1 T C - ReadM SNP 0007.scaffold00024 1866277 1 T A - ReadM SNP 0007.scaffold00024 1866348 1 A G - ReadM SNP 0007.scaffold00024 1866557 1 C G - ReadM SNP 0007.scaffold00024 1866796 1 G A - ReadM SNP 0007.scaffold00024 1868848 1 G C - ReadM SNP 0007.scaffold00024 1868883 1 T C - ReadM SNP 0007.scaffold00024 1868949 1 C T - ReadM SNP 0007.scaffold00024 1869212 1 G A - Both SNP 0007.scaffold00024 1870058 1 A G scaffold8101 Both SNP 0007.scaffold00024 1870074 1 G A scaffold8101 ReadM SNP 0007.scaffold00024 1870229 1 A T - ReadM SNP 0007.scaffold00024 1870373 1 A G - ReadM INDEL 0007.scaffold00024 1870671 1 . A - ReadM SNP 0007.scaffold00024 1871019 1 A C - Both SNP 0007.scaffold00024 1871156 1 T C scaffold8101 Both SNP 0007.scaffold00024 1871287 1 T C scaffold8101 ScafM SNP 0007.scaffold00024 1871332 1 A T scaffold8101 ScafM SNP 0007.scaffold00024 1871704 1 A T scaffold8101 Both SNP 0007.scaffold00024 1872056 1 T C scaffold8101 ReadM SNP 0007.scaffold00024 1872367 1 A G - ReadM SNP 0007.scaffold00024 1872517 1 C A - Both SNP 0007.scaffold00024 1872870 1 C T scaffold8101 Both SNP 0007.scaffold00024 1873435 1 C T scaffold8101 Both SNP 0007.scaffold00024 1873746 1 A G scaffold8101 Both SNP 0007.scaffold00024 1873836 1 T G scaffold8101 Both SNP 0007.scaffold00024 1873956 1 T A scaffold8101 Both SNP 0007.scaffold00024 1874047 1 G A scaffold8101 ReadM SNP 0007.scaffold00024 1874071 1 G A - ReadM SNP 0007.scaffold00024 1874124 1 T C - ReadM SNP 0007.scaffold00024 1874199 1 T A - ReadM SNP 0007.scaffold00024 1874488 1 C T - ReadM SNP 0007.scaffold00024 1874737 1 T C - ReadM SNP 0007.scaffold00024 1874780 1 C T - ReadM SNP 0007.scaffold00024 1874986 1 C T - ReadM SNP 0007.scaffold00024 1875010 1 C T - ReadM SNP 0007.scaffold00024 1875032 1 A T - ReadM INDEL 0007.scaffold00024 1875610 2 .. AC - ReadM SNP 0007.scaffold00024 1875782 1 G T - ReadM SNP 0007.scaffold00024 1875915 1 G A - ReadM SNP 0007.scaffold00024 1876238 1 T A - ReadM SNP 0007.scaffold00024 1877069 1 C T - ReadM SNP 0007.scaffold00024 1877127 1 G A - ReadM SNP 0007.scaffold00024 1877332 1 A G - ReadM SNP 0007.scaffold00024 1877464 1 G T - ReadM SNP 0007.scaffold00024 1877547 1 T C - ReadM SNP 0007.scaffold00024 1877684 1 A G - ReadM SNP 0007.scaffold00024 1877772 1 A G - ReadM SNP 0007.scaffold00024 1877895 1 G A - ReadM INDEL 0007.scaffold00024 1878173 1 A . - ReadM SNP 0007.scaffold00024 1878198 1 A C - ReadM SNP 0007.scaffold00024 1878389 1 T C - ReadM SNP 0007.scaffold00024 1878547 1 G T - ReadM SNP 0007.scaffold00024 1878591 1 G A - ReadM SNP 0007.scaffold00024 1878817 1 C T - Both SNP 0007.scaffold00024 1878939 1 A G scaffold8101 Both SNP 0007.scaffold00024 1879068 1 A G scaffold8101 Both INDEL 0007.scaffold00024 1879136 1 . A scaffold8101 Both SNP 0007.scaffold00024 1879234 1 T G scaffold8101 Both SNP 0007.scaffold00024 1879923 1 T C scaffold8101 Both INDEL 0007.scaffold00024 1880268 1 A . scaffold8101 ScafM INDEL 0007.scaffold00024 1880414 1 . A scaffold8101 ScafM INDEL 0007.scaffold00024 1880431 1 A . scaffold8101 ScafM INDEL 0007.scaffold00024 1880441 1 A . scaffold8101 Both SNP 0007.scaffold00024 1880859 1 A G scaffold8101 Both SNP 0007.scaffold00024 1881157 1 G C scaffold8101 ReadM SNP 0007.scaffold00024 1881471 1 C T - Both SNP 0007.scaffold00024 1881874 1 A G scaffold8101 Both SNP 0007.scaffold00024 1882169 1 T A scaffold8101 Both SNP 0007.scaffold00024 1882233 1 C A scaffold8101 ScafM SNP 0007.scaffold00024 1882689 2 TG CA scaffold8101 Both SNP 0007.scaffold00024 1882842 1 A G scaffold8101 Both SNP 0007.scaffold00024 1882949 1 C T scaffold8101 Both INDEL 0007.scaffold00024 1883049 1 . A scaffold8101 Both SNP 0007.scaffold00024 1883111 1 T A scaffold8101 ScafM INDEL 0007.scaffold00024 1883270 2 .. AT scaffold8101 ReadM INDEL 0007.scaffold00024 1883274 2 .. TT - Both SNP 0007.scaffold00024 1883353 1 T A scaffold8101 ScafM SNP 0007.scaffold00024 1883424 1 G C scaffold8101 ReadM SNP 0007.scaffold00024 1883700 1 G A - ReadM SNP 0007.scaffold00024 1883803 1 A G - ReadM SNP 0007.scaffold00024 1884227 1 C T - ReadM SNP 0007.scaffold00024 1884264 1 G A - ReadM SNP 0007.scaffold00024 1884307 1 A C - ReadM SNP 0007.scaffold00024 1885254 1 G A - ReadM SNP 0007.scaffold00024 1885447 1 A T - ReadM SNP 0007.scaffold00024 1885456 1 A T - ScafM INDEL 0007.scaffold00024 1885628 19 ................... AGTACTCCCTCCGTCCCAT scaffold22013 ScafM SNP 0007.scaffold00024 1885703 1 C T scaffold22013 ScafM INDEL 0007.scaffold00024 1886451 1 . G scaffold5338 ScafM INDEL 0007.scaffold00024 1886645 1 . T scaffold5338 ScafM SNP 0007.scaffold00024 1886675 1 T C scaffold5338 ScafM INDEL 0007.scaffold00024 1886695 1 . T scaffold5338 ScafM INDEL 0007.scaffold00024 1886714 8 TGACTGGC ........ scaffold5338 ScafM INDEL 0007.scaffold00024 1886749 1 T . scaffold5338 ScafM SNP 0007.scaffold00024 1886805 1 A T scaffold5338 ScafM SNP 0007.scaffold00024 1886879 1 G T scaffold5338 ScafM INDEL 0007.scaffold00024 1886930 7 ....... AGGAGTG scaffold5338 ScafM INDEL 0007.scaffold00024 1886935 1 . C scaffold5338 Both SNP 0007.scaffold00024 1887045 1 C G scaffold5338 Both SNP 0007.scaffold00024 1887077 1 C T scaffold5338 Both SNP 0007.scaffold00024 1887095 1 T C scaffold5338 Both SNP 0007.scaffold00024 1887215 1 G C scaffold5338 Both SNP 0007.scaffold00024 1887234 1 A T scaffold5338 ScafM SNP 0007.scaffold00024 1887262 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1887430 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1887441 1 C T scaffold5338 ScafM INDEL 0007.scaffold00024 1887613 1 G . scaffold5338 ScafM SNP 0007.scaffold00024 1887616 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1888487 1 A T scaffold5338 ScafM SNP 0007.scaffold00024 1888577 1 T G scaffold5338 ScafM SNP 0007.scaffold00024 1888729 1 G A scaffold5338 ScafM INDEL 0007.scaffold00024 1888754 4 .... TTTC scaffold5338 ScafM SNP 0007.scaffold00024 1888756 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1888781 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1889069 1 T A scaffold5338 Both SNP 0007.scaffold00024 1889096 1 G A scaffold5338 Both SNP 0007.scaffold00024 1889105 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1889164 1 A G scaffold5338 Both SNP 0007.scaffold00024 1889181 1 A T scaffold5338 Both SNP 0007.scaffold00024 1889264 1 A T scaffold5338 Both SNP 0007.scaffold00024 1889438 1 A G scaffold5338 Both SNP 0007.scaffold00024 1889525 1 G A scaffold5338 Both SNP 0007.scaffold00024 1889549 1 T C scaffold5338 Both SNP 0007.scaffold00024 1889562 1 G A scaffold5338 Both SNP 0007.scaffold00024 1889590 1 T C scaffold5338 Both SNP 0007.scaffold00024 1889709 1 A G scaffold5338 ReadM SNP 0007.scaffold00024 1889746 1 C T - ScafM SNP 0007.scaffold00024 1889890 1 C G scaffold5338 ScafM SNP 0007.scaffold00024 1889926 1 A T scaffold5338 ScafM INDEL 0007.scaffold00024 1889959 1 . T scaffold5338 Both INDEL 0007.scaffold00024 1889981 1 A . scaffold5338 ScafM SNP 0007.scaffold00024 1890054 1 T A scaffold5338 Both INDEL 0007.scaffold00024 1890216 1 . A scaffold5338 ScafM SNP 0007.scaffold00024 1890225 1 G A scaffold5338 Both SNP 0007.scaffold00024 1890356 1 G A scaffold5338 Both SNP 0007.scaffold00024 1890371 1 T C scaffold5338 Both SNP 0007.scaffold00024 1890374 1 T G scaffold5338 Both SNP 0007.scaffold00024 1890893 1 A T scaffold5338 Both SNP 0007.scaffold00024 1890955 1 G C scaffold5338 Both SNP 0007.scaffold00024 1891048 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1891121 1 A C scaffold5338 ScafM SNP 0007.scaffold00024 1891123 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1891135 2 CT TC scaffold5338 ScafM INDEL 0007.scaffold00024 1891218 6 ...... CGGACA scaffold5338 Both SNP 0007.scaffold00024 1891332 1 G T scaffold5338 ReadM INDEL 0007.scaffold00024 1891373 1 . T - ReadM SNP 0007.scaffold00024 1891402 1 T A - Both SNP 0007.scaffold00024 1891523 1 A G scaffold5338 ReadM INDEL 0007.scaffold00024 1891597 1 T . - ReadM SNP 0007.scaffold00024 1891607 1 C T - ReadM SNP 0007.scaffold00024 1891680 1 T A - ReadM SNP 0007.scaffold00024 1891704 1 C T - ReadM SNP 0007.scaffold00024 1891712 1 A T - ReadM SNP 0007.scaffold00024 1891738 1 A G - Both SNP 0007.scaffold00024 1891881 1 T C scaffold5338 Both SNP 0007.scaffold00024 1891916 1 G A scaffold5338 Both INDEL 0007.scaffold00024 1891932 1 T . scaffold5338 ScafM SNP 0007.scaffold00024 1891975 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1892073 1 A T scaffold5338 Both SNP 0007.scaffold00024 1892297 1 G A scaffold5338 Both SNP 0007.scaffold00024 1892316 1 G A scaffold5338 Both SNP 0007.scaffold00024 1892328 1 C T scaffold5338 Both SNP 0007.scaffold00024 1892469 1 G C scaffold5338 Both SNP 0007.scaffold00024 1892505 1 G A scaffold5338 Both SNP 0007.scaffold00024 1892733 1 C G scaffold5338 Both SNP 0007.scaffold00024 1892789 1 G A scaffold5338 Both SNP 0007.scaffold00024 1892830 1 G A scaffold5338 Both INDEL 0007.scaffold00024 1892974 1 T . scaffold5338 Both SNP 0007.scaffold00024 1893158 1 A G scaffold5338 Both INDEL 0007.scaffold00024 1893226 1 . A scaffold5338 ScafM INDEL 0007.scaffold00024 1893296 1 A . scaffold5338 ScafM INDEL 0007.scaffold00024 1893301 24 TAGTGCTTAAAAGAAATACCTTCT ........................ scaffold5338 ScafM INDEL 0007.scaffold00024 1893327 4 CTTC .... scaffold5338 ScafM SNP 0007.scaffold00024 1893345 1 C A scaffold5338 Both SNP 0007.scaffold00024 1893366 1 A G scaffold5338 Both SNP 0007.scaffold00024 1893398 1 T C scaffold5338 Both SNP 0007.scaffold00024 1893450 1 C A scaffold5338 Both SNP 0007.scaffold00024 1893455 1 C G scaffold5338 Both SNP 0007.scaffold00024 1893739 1 A T scaffold5338 Both SNP 0007.scaffold00024 1893748 1 T C scaffold5338 Both INDEL 0007.scaffold00024 1893895 1 T . scaffold5338 Both SNP 0007.scaffold00024 1893974 1 T C scaffold5338 Both SNP 0007.scaffold00024 1893993 1 C G scaffold5338 ScafM INDEL 0007.scaffold00024 1894061 5 ..... CAGCG scaffold5338 ScafM INDEL 0007.scaffold00024 1894063 3 ... ACA scaffold5338 Both SNP 0007.scaffold00024 1894125 1 A G scaffold5338 Both SNP 0007.scaffold00024 1894202 1 C T scaffold5338 Both SNP 0007.scaffold00024 1894272 1 A C scaffold5338 Both SNP 0007.scaffold00024 1894278 1 G A scaffold5338 ScafM INDEL 0007.scaffold00024 1894307 1 T . scaffold5338 ScafM SNP 0007.scaffold00024 1894309 2 AT CC scaffold5338 Both SNP 0007.scaffold00024 1894340 1 C G scaffold5338 Both SNP 0007.scaffold00024 1894350 1 T C scaffold5338 Both SNP 0007.scaffold00024 1894368 1 C A scaffold5338 Both SNP 0007.scaffold00024 1894448 1 A G scaffold5338 Both SNP 0007.scaffold00024 1894501 1 A G scaffold5338 Both SNP 0007.scaffold00024 1894510 1 C T scaffold5338 Both SNP 0007.scaffold00024 1894578 1 T C scaffold5338 Both SNP 0007.scaffold00024 1894621 1 C T scaffold5338 Both SNP 0007.scaffold00024 1894663 1 A T scaffold5338 Both INDEL 0007.scaffold00024 1894714 1 C . scaffold5338 Both SNP 0007.scaffold00024 1894720 1 A G scaffold5338 Both SNP 0007.scaffold00024 1894739 1 A T scaffold5338 Both SNP 0007.scaffold00024 1894811 1 G A scaffold5338 ScafM SNP 0007.scaffold00024 1894829 2 GT AC scaffold5338 ScafM SNP 0007.scaffold00024 1894871 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1894881 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1894883 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1894904 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1894911 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1894923 1 G A scaffold5338 Both SNP 0007.scaffold00024 1894955 1 C G scaffold5338 Both SNP 0007.scaffold00024 1894962 1 A T scaffold5338 Both SNP 0007.scaffold00024 1895010 1 T G scaffold5338 ScafM SNP 0007.scaffold00024 1895169 1 G A scaffold5338 ScafM SNP 0007.scaffold00024 1895171 1 A G scaffold5338 Both SNP 0007.scaffold00024 1895190 1 T C scaffold5338 Both SNP 0007.scaffold00024 1895224 1 A C scaffold5338 Both SNP 0007.scaffold00024 1895299 1 G A scaffold5338 Both SNP 0007.scaffold00024 1895374 1 T G scaffold5338 Both SNP 0007.scaffold00024 1895481 1 A G scaffold5338 Both SNP 0007.scaffold00024 1895541 1 T G scaffold5338 Both INDEL 0007.scaffold00024 1895571 1 T . scaffold5338 Both SNP 0007.scaffold00024 1895595 1 C G scaffold5338 Both SNP 0007.scaffold00024 1895604 1 C T scaffold5338 Both SNP 0007.scaffold00024 1895809 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1895949 1 T G scaffold5338 ScafM SNP 0007.scaffold00024 1896069 1 T A scaffold5338 ScafM SNP 0007.scaffold00024 1896071 1 C A scaffold5338 ScafM INDEL 0007.scaffold00024 1896073 11 ........... ATTTATTTTTT scaffold5338 ScafM SNP 0007.scaffold00024 1896121 1 C A scaffold5338 ScafM SNP 0007.scaffold00024 1896182 1 C A scaffold5338 ScafM SNP 0007.scaffold00024 1896240 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1896263 1 A T scaffold5338 ScafM INDEL 0007.scaffold00024 1896294 15 ............... GGTGTGGTTTCGTTT scaffold5338 ScafM SNP 0007.scaffold00024 1897299 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1897310 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1897318 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1897463 1 G A scaffold5338 ScafM SNP 0007.scaffold00024 1897503 1 T G scaffold5338 ScafM SNP 0007.scaffold00024 1897599 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1897631 1 G T scaffold5338 ScafM SNP 0007.scaffold00024 1897636 1 G A scaffold5338 ScafM SNP 0007.scaffold00024 1897663 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1897693 1 T C scaffold5338 Both SNP 0007.scaffold00024 1897722 1 C T scaffold5338 Both SNP 0007.scaffold00024 1897915 1 C T scaffold5338 Both SNP 0007.scaffold00024 1897923 1 T C scaffold5338 Both SNP 0007.scaffold00024 1897971 1 T C scaffold5338 ReadM SNP 0007.scaffold00024 1898070 1 G A - ReadM SNP 0007.scaffold00024 1898075 1 T G - ReadM SNP 0007.scaffold00024 1898181 1 C T - ReadM SNP 0007.scaffold00024 1898186 1 G C - ReadM SNP 0007.scaffold00024 1898348 1 C A - ReadM SNP 0007.scaffold00024 1898367 1 T C - ScafM SNP 0007.scaffold00024 1898823 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1899597 1 C G scaffold5338 ScafM INDEL 0007.scaffold00024 1899626 1 A . scaffold5338 ScafM INDEL 0007.scaffold00024 1899657 2 AA .. scaffold5338 ScafM INDEL 0007.scaffold00024 1899774 13 ............. AATTTTTTCAACC scaffold5338 ScafM SNP 0007.scaffold00024 1899776 1 G T scaffold5338 ScafM INDEL 0007.scaffold00024 1899808 1 . T scaffold5338 ScafM SNP 0007.scaffold00024 1899838 1 A G scaffold5338 ScafM SNP 0007.scaffold00024 1899920 1 T C scaffold5338 ScafM SNP 0007.scaffold00024 1899975 1 G A scaffold5338 ScafM SNP 0007.scaffold00024 1899992 1 G T scaffold5338 Both SNP 0007.scaffold00024 1900080 1 T C scaffold5338 Both INDEL 0007.scaffold00024 1900251 1 A . scaffold5338 Both SNP 0007.scaffold00024 1900301 1 T A scaffold5338 Both SNP 0007.scaffold00024 1900371 1 G A scaffold5338 Both SNP 0007.scaffold00024 1900394 1 A G scaffold5338 Both INDEL 0007.scaffold00024 1900443 1 G . scaffold5338 Both SNP 0007.scaffold00024 1900557 1 G T scaffold5338 Both INDEL 0007.scaffold00024 1900705 2 TA .. scaffold5338 Both SNP 0007.scaffold00024 1900818 1 C T scaffold5338 Both SNP 0007.scaffold00024 1900838 1 T G scaffold5338 Both SNP 0007.scaffold00024 1900848 1 C T scaffold5338 ReadM SNP 0007.scaffold00024 1900921 1 G A - ReadM SNP 0007.scaffold00024 1900931 1 C T - ReadM SNP 0007.scaffold00024 1900936 1 C T - ReadM SNP 0007.scaffold00024 1901036 1 T C - ReadM SNP 0007.scaffold00024 1901070 1 C T - Both SNP 0007.scaffold00024 1901272 1 C T scaffold5338 Both SNP 0007.scaffold00024 1901539 1 T A scaffold5338 Both SNP 0007.scaffold00024 1901657 1 T C scaffold5338 Both SNP 0007.scaffold00024 1901721 1 A T scaffold5338 Both SNP 0007.scaffold00024 1901739 1 A T scaffold5338 Both SNP 0007.scaffold00024 1901775 1 A G scaffold5338 ReadM SNP 0007.scaffold00024 1901807 1 T C - ReadM SNP 0007.scaffold00024 1901822 1 T G - ReadM SNP 0007.scaffold00024 1901888 1 C T - Both SNP 0007.scaffold00024 1902009 1 A G scaffold5338 Both SNP 0007.scaffold00024 1902191 1 G A scaffold5338 Both INDEL 0007.scaffold00024 1902247 1 C . scaffold5338 Both SNP 0007.scaffold00024 1903150 1 G A scaffold5338 Both SNP 0007.scaffold00024 1903523 1 T C scaffold5338 Both SNP 0007.scaffold00024 1903904 1 T A scaffold5338 Both SNP 0007.scaffold00024 1904363 1 A G scaffold5338 Both SNP 0007.scaffold00024 1904454 1 A G scaffold5338 Both INDEL 0007.scaffold00024 1904583 1 . T scaffold5338 Both SNP 0007.scaffold00024 1904682 1 C T scaffold5338 Both SNP 0007.scaffold00024 1905308 1 G A scaffold5338 Both SNP 0007.scaffold00024 1905425 1 T C scaffold5338 Both SNP 0007.scaffold00024 1905475 1 A T scaffold5338 ScafM INDEL 0007.scaffold00024 1905558 4 .... ATCT scaffold5338 ScafM SNP 0007.scaffold00024 1905564 1 A G scaffold5338 Both SNP 0007.scaffold00024 1905584 1 A T scaffold5338 Both SNP 0007.scaffold00024 1905630 1 T C scaffold5338 Both SNP 0007.scaffold00024 1905799 1 T G scaffold5338 ScafM SNP 0007.scaffold00024 1905830 2 CT AG scaffold5338 ScafM INDEL 0007.scaffold00024 1905917 69 ..................................................................... CCTGCTGGTCTTTTTTTCTAGATGTATATATTAAAATCTGATTTTTCATTAATCTTTTGATTGCTTAAT scaffold5338 Both SNP 0007.scaffold00024 1905922 1 T A scaffold5338 Both INDEL 0007.scaffold00024 1905946 1 G . scaffold5338 Both SNP 0007.scaffold00024 1905954 1 C T scaffold5338 Both INDEL 0007.scaffold00024 1905985 1 . A scaffold5338 Both SNP 0007.scaffold00024 1906110 1 C G scaffold5338 ScafM SNP 0007.scaffold00024 1906378 1 C T scaffold5338 ScafM SNP 0007.scaffold00024 1907049 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1907067 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1907072 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1907081 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1907085 2 .. CT scaffold2012 ScafM INDEL 0007.scaffold00024 1907096 1 A . scaffold2012 ScafM SNP 0007.scaffold00024 1907108 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1907111 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1907121 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1907126 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1907154 1 A T scaffold2012 Both SNP 0007.scaffold00024 1907199 1 G A scaffold2012 Both SNP 0007.scaffold00024 1907230 1 A C scaffold2012 ScafM INDEL 0007.scaffold00024 1907337 15 AGTTGTAATTCCAAG ............... scaffold2012 ScafM INDEL 0007.scaffold00024 1907353 5 TACAA ..... scaffold2012 ScafM SNP 0007.scaffold00024 1907377 1 T C scaffold2012 ReadM SNP 0007.scaffold00024 1907703 1 T A - ScafM SNP 0007.scaffold00024 1908128 2 TT AC scaffold2012 ScafM SNP 0007.scaffold00024 1908154 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1908163 2 AT TA scaffold2012 ScafM SNP 0007.scaffold00024 1908196 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1908220 2 TG CA scaffold2012 ScafM SNP 0007.scaffold00024 1908225 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1908239 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1908261 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1908263 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1908271 1 G A scaffold2012 ReadM SNP 0007.scaffold00024 1908485 1 A G - ReadM SNP 0007.scaffold00024 1908503 1 G T - ReadM SNP 0007.scaffold00024 1908523 1 C T - ReadM SNP 0007.scaffold00024 1908583 1 G A - ReadM SNP 0007.scaffold00024 1908697 1 G A - ReadM SNP 0007.scaffold00024 1908742 1 A G - ReadM SNP 0007.scaffold00024 1908760 1 C T - Both SNP 0007.scaffold00024 1908962 1 C T scaffold2012 Both INDEL 0007.scaffold00024 1909006 1 . A scaffold2012 ScafM SNP 0007.scaffold00024 1909046 1 A T scaffold2012 Both SNP 0007.scaffold00024 1909058 1 A T scaffold2012 Both SNP 0007.scaffold00024 1909062 1 T G scaffold2012 Both SNP 0007.scaffold00024 1909115 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1909344 1 G A scaffold2012 ScafM INDEL 0007.scaffold00024 1909439 6 GATTAT .....C scaffold2012 ScafM SNP 0007.scaffold00024 1909446 1 C G scaffold2012 ScafM INDEL 0007.scaffold00024 1909448 2 TG .A scaffold2012 ScafM SNP 0007.scaffold00024 1909488 1 C T scaffold2012 ScafM INDEL 0007.scaffold00024 1909491 4 .... TAAT scaffold2012 ScafM SNP 0007.scaffold00024 1914960 1 G A scaffold11179 ScafM SNP 0007.scaffold00024 1914985 1 G C scaffold11179 ScafM SNP 0007.scaffold00024 1915032 1 T G scaffold11179 ScafM SNP 0007.scaffold00024 1915063 2 AC GT scaffold11179 ScafM SNP 0007.scaffold00024 1915090 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1915149 1 T C scaffold11179 ScafM SNP 0007.scaffold00024 1915204 1 C G scaffold11179 ScafM SNP 0007.scaffold00024 1915317 1 A T scaffold11179 ScafM SNP 0007.scaffold00024 1915426 1 G C scaffold11179 ScafM SNP 0007.scaffold00024 1915499 1 A G scaffold11179 ScafM SNP 0007.scaffold00024 1915676 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1915678 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1915684 1 A G scaffold11179 ScafM INDEL 0007.scaffold00024 1915687 1 . G scaffold11179 ScafM INDEL 0007.scaffold00024 1915843 1 A . scaffold11179 ScafM SNP 0007.scaffold00024 1915856 1 G C scaffold11179 ScafM SNP 0007.scaffold00024 1915947 1 G C scaffold11179 ScafM SNP 0007.scaffold00024 1916034 1 T C scaffold11179 ScafM SNP 0007.scaffold00024 1916069 1 T C scaffold11179 ScafM SNP 0007.scaffold00024 1916154 1 A C scaffold11179 ScafM SNP 0007.scaffold00024 1916196 1 T C scaffold11179 ScafM SNP 0007.scaffold00024 1916203 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1916231 1 C G scaffold11179 ScafM SNP 0007.scaffold00024 1916236 1 A G scaffold11179 ScafM SNP 0007.scaffold00024 1916490 1 A G scaffold11179 ScafM SNP 0007.scaffold00024 1916498 1 G A scaffold11179 ScafM SNP 0007.scaffold00024 1916607 1 G T scaffold11179 ScafM SNP 0007.scaffold00024 1916618 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1916632 1 C G scaffold11179 ScafM SNP 0007.scaffold00024 1916643 1 C A scaffold11179 ScafM SNP 0007.scaffold00024 1916660 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1916710 1 T A scaffold11179 ScafM SNP 0007.scaffold00024 1916723 1 T C scaffold11179 ScafM SNP 0007.scaffold00024 1916786 1 A C scaffold11179 ScafM SNP 0007.scaffold00024 1916789 1 C T scaffold11179 ScafM SNP 0007.scaffold00024 1916850 1 C G scaffold11179 ScafM SNP 0007.scaffold00024 1916984 1 G A scaffold11179 ScafM SNP 0007.scaffold00024 1917102 1 A G scaffold11179 ScafM SNP 0007.scaffold00024 1917126 1 T C scaffold11179 ScafM INDEL 0007.scaffold00024 1917768 1 . A scaffold9680 ScafM SNP 0007.scaffold00024 1917774 1 G T scaffold9680 ScafM SNP 0007.scaffold00024 1917777 1 C T scaffold9680 ScafM SNP 0007.scaffold00024 1917779 1 T A scaffold9680 ScafM SNP 0007.scaffold00024 1917796 1 G A scaffold9680 ScafM SNP 0007.scaffold00024 1917804 1 C G scaffold9680 ScafM SNP 0007.scaffold00024 1917860 1 G T scaffold9680 ScafM SNP 0007.scaffold00024 1917867 1 T C scaffold9680 ScafM SNP 0007.scaffold00024 1917886 1 G A scaffold9680 ScafM SNP 0007.scaffold00024 1917911 1 C T scaffold9680 ScafM SNP 0007.scaffold00024 1917931 1 A G scaffold9680 ScafM SNP 0007.scaffold00024 1917988 1 T G scaffold9680 ScafM SNP 0007.scaffold00024 1917994 2 AC TT scaffold9680 ScafM SNP 0007.scaffold00024 1922546 1 A T scaffold170 ScafM SNP 0007.scaffold00024 1922550 1 G A scaffold170 ScafM SNP 0007.scaffold00024 1922555 1 A G scaffold170 ScafM SNP 0007.scaffold00024 1922571 2 CC TT scaffold170 ScafM SNP 0007.scaffold00024 1922593 1 C T scaffold170 ScafM SNP 0007.scaffold00024 1922598 1 A G scaffold170 ScafM SNP 0007.scaffold00024 1926245 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926256 1 G T scaffold1344 ScafM SNP 0007.scaffold00024 1926267 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926271 2 CT TG scaffold1344 ScafM SNP 0007.scaffold00024 1926295 1 T A scaffold1344 ScafM SNP 0007.scaffold00024 1926310 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926317 1 C T scaffold1344 ScafM SNP 0007.scaffold00024 1926369 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926378 1 G T scaffold1344 ScafM SNP 0007.scaffold00024 1926411 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926431 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926439 1 C A scaffold1344 ScafM SNP 0007.scaffold00024 1926445 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926459 1 C A scaffold1344 ScafM INDEL 0007.scaffold00024 1926462 1 A . scaffold1344 ScafM SNP 0007.scaffold00024 1926489 1 C G scaffold1344 ScafM SNP 0007.scaffold00024 1926503 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926531 1 T G scaffold1344 ScafM SNP 0007.scaffold00024 1926551 1 C T scaffold1344 ScafM SNP 0007.scaffold00024 1926558 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926563 1 T G scaffold1344 ScafM SNP 0007.scaffold00024 1926565 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926633 1 T G scaffold1344 ScafM SNP 0007.scaffold00024 1926673 1 C T scaffold1344 ScafM SNP 0007.scaffold00024 1926696 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926718 1 T C scaffold1344 ScafM SNP 0007.scaffold00024 1926801 1 C T scaffold1344 ScafM SNP 0007.scaffold00024 1926849 1 T C scaffold1344 ScafM SNP 0007.scaffold00024 1926857 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926947 1 A G scaffold1344 ScafM SNP 0007.scaffold00024 1926974 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1926993 1 A T scaffold1344 ScafM SNP 0007.scaffold00024 1927025 1 C T scaffold1344 ScafM SNP 0007.scaffold00024 1927039 1 G A scaffold1344 ScafM SNP 0007.scaffold00024 1927968 1 C A scaffold871 ScafM SNP 0007.scaffold00024 1927977 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1927980 1 T G scaffold871 ScafM SNP 0007.scaffold00024 1927983 1 A G scaffold871 ScafM SNP 0007.scaffold00024 1928001 1 G T scaffold871 ScafM SNP 0007.scaffold00024 1928014 1 A G scaffold871 ScafM SNP 0007.scaffold00024 1928023 1 A G scaffold871 ScafM SNP 0007.scaffold00024 1928034 1 C T scaffold871 ScafM SNP 0007.scaffold00024 1928038 1 T A scaffold871 ScafM INDEL 0007.scaffold00024 1928044 5 TGGTA ..... scaffold871 ScafM SNP 0007.scaffold00024 1928122 1 C A scaffold871 ScafM SNP 0007.scaffold00024 1928184 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928188 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928232 1 A C scaffold871 ScafM SNP 0007.scaffold00024 1928238 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928265 1 G C scaffold871 ScafM SNP 0007.scaffold00024 1928271 1 C G scaffold871 ScafM SNP 0007.scaffold00024 1928273 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928293 1 C T scaffold871 ScafM SNP 0007.scaffold00024 1928300 1 G C scaffold871 ScafM SNP 0007.scaffold00024 1928332 2 CC TA scaffold871 ScafM INDEL 0007.scaffold00024 1928354 1 . T scaffold871 ScafM SNP 0007.scaffold00024 1928366 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928396 1 T A scaffold871 ScafM SNP 0007.scaffold00024 1928400 1 A G scaffold871 ScafM SNP 0007.scaffold00024 1928408 1 T C scaffold871 ScafM SNP 0007.scaffold00024 1928412 1 G A scaffold871 ScafM SNP 0007.scaffold00024 1928429 2 AA CG scaffold871 ScafM SNP 0007.scaffold00024 1928461 1 G C scaffold871 ScafM SNP 0007.scaffold00024 1928465 1 T C scaffold871 ScafM SNP 0007.scaffold00024 1929510 1 T A scaffold4659 ScafM SNP 0007.scaffold00024 1929541 1 A C scaffold4659 ScafM SNP 0007.scaffold00024 1929585 1 C T scaffold4659 ScafM INDEL 0007.scaffold00024 1929620 4 AAAA .... scaffold4659 ScafM SNP 0007.scaffold00024 1929725 1 G A scaffold4659 ScafM SNP 0007.scaffold00024 1929797 1 T A scaffold4659 ScafM SNP 0007.scaffold00024 1929814 1 C T scaffold4659 ScafM INDEL 0007.scaffold00024 1929827 2 .A GT scaffold4659 ScafM SNP 0007.scaffold00024 1929911 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1929944 1 G C scaffold4659 ScafM SNP 0007.scaffold00024 1929973 1 C G scaffold4659 ScafM SNP 0007.scaffold00024 1930015 1 C A scaffold4659 ScafM SNP 0007.scaffold00024 1930035 2 TC CT scaffold4659 ScafM SNP 0007.scaffold00024 1930057 1 A T scaffold4659 ScafM SNP 0007.scaffold00024 1930165 1 A G scaffold4659 ScafM SNP 0007.scaffold00024 1930169 1 C T scaffold4659 ScafM SNP 0007.scaffold00024 1930414 1 A G scaffold4659 ScafM SNP 0007.scaffold00024 1930457 1 C T scaffold4659 ScafM SNP 0007.scaffold00024 1930504 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1930566 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1930575 1 G T scaffold4659 ScafM SNP 0007.scaffold00024 1930588 1 G A scaffold4659 ScafM SNP 0007.scaffold00024 1930601 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1930705 1 T G scaffold4659 ScafM INDEL 0007.scaffold00024 1930707 1 . G scaffold4659 ScafM SNP 0007.scaffold00024 1930792 1 A G scaffold4659 ScafM SNP 0007.scaffold00024 1930819 1 C T scaffold4659 ScafM SNP 0007.scaffold00024 1930830 1 C T scaffold4659 ScafM SNP 0007.scaffold00024 1930848 1 A G scaffold4659 ScafM SNP 0007.scaffold00024 1930962 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1931010 1 C A scaffold4659 ScafM SNP 0007.scaffold00024 1931012 1 C G scaffold4659 ScafM SNP 0007.scaffold00024 1931044 1 A G scaffold4659 ScafM SNP 0007.scaffold00024 1931047 1 T C scaffold4659 ScafM SNP 0007.scaffold00024 1931068 1 C G scaffold4659 ScafM SNP 0007.scaffold00024 1931180 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1931261 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1931523 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1931532 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1931637 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1931652 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1931680 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1931690 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1931694 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1931698 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1931737 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1931739 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1931741 1 C T scaffold2012 Both SNP 0007.scaffold00024 1931802 1 C G scaffold2012 Both SNP 0007.scaffold00024 1931831 1 C G scaffold2012 Both SNP 0007.scaffold00024 1931852 1 G A scaffold2012 Both SNP 0007.scaffold00024 1931880 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1931946 1 T A scaffold2012 Both SNP 0007.scaffold00024 1931957 1 A T scaffold2012 ScafM INDEL 0007.scaffold00024 1931987 4 .... AATA scaffold2012 ScafM INDEL 0007.scaffold00024 1932015 3 ... CTT scaffold2012 ScafM INDEL 0007.scaffold00024 1932018 1 . T scaffold2012 ScafM SNP 0007.scaffold00024 1932028 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1932086 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1932104 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1932113 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1932115 1 G T scaffold2012 Both SNP 0007.scaffold00024 1932169 1 C T scaffold2012 Both SNP 0007.scaffold00024 1932219 1 A G scaffold2012 Both SNP 0007.scaffold00024 1932226 1 T C scaffold2012 Both SNP 0007.scaffold00024 1932291 1 C T scaffold2012 Both SNP 0007.scaffold00024 1932314 1 C A scaffold2012 Both SNP 0007.scaffold00024 1932349 1 A G scaffold2012 Both SNP 0007.scaffold00024 1932406 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1932426 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1932430 1 A T scaffold2012 ReadM SNP 0007.scaffold00024 1932570 1 G A - Both SNP 0007.scaffold00024 1932666 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1932747 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1932749 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1932751 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1932758 6 CCCCCC ...... scaffold2012 ScafM INDEL 0007.scaffold00024 1932820 2 .. CC scaffold2012 ScafM SNP 0007.scaffold00024 1932825 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1932830 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1932832 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1932888 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1932897 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1932902 2 .. TC scaffold2012 ScafM SNP 0007.scaffold00024 1932928 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1932950 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1932963 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1932979 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1932994 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1932998 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933018 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1933025 1 T . scaffold2012 ScafM SNP 0007.scaffold00024 1933027 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1933052 1 . A scaffold2012 ScafM SNP 0007.scaffold00024 1933054 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933073 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1933099 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933117 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933127 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1933129 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933131 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1933133 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1933152 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1933160 4 ATGC .... scaffold2012 ScafM SNP 0007.scaffold00024 1933203 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1933207 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1933209 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1933225 1 G A scaffold2012 Both SNP 0007.scaffold00024 1933251 1 A C scaffold2012 Both SNP 0007.scaffold00024 1933302 1 G T scaffold2012 Both SNP 0007.scaffold00024 1933356 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1933371 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1933385 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1933387 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1933426 1 A . scaffold2012 ScafM SNP 0007.scaffold00024 1933442 1 G A scaffold2012 ScafM INDEL 0007.scaffold00024 1933475 5 ..... GCTCC scaffold2012 ScafM INDEL 0007.scaffold00024 1933477 1 . C scaffold2012 ScafM SNP 0007.scaffold00024 1933482 1 A T scaffold2012 ScafM INDEL 0007.scaffold00024 1933520 5 ..... AAGAA scaffold2012 ScafM INDEL 0007.scaffold00024 1933522 1 . A scaffold2012 ScafM SNP 0007.scaffold00024 1933538 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1933561 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1933579 1 A G scaffold2012 Both SNP 0007.scaffold00024 1933603 1 G A scaffold2012 Both SNP 0007.scaffold00024 1933615 1 C T scaffold2012 Both SNP 0007.scaffold00024 1933692 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1933722 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1933739 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1933749 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1933754 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1933762 2 GC AT scaffold2012 ScafM SNP 0007.scaffold00024 1933773 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1933828 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1933832 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1933901 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1933904 1 C A scaffold2012 ScafM INDEL 0007.scaffold00024 1933910 29 ............................. TTATTTGTTTGTTGTGGATTGGATATATT scaffold2012 ScafM SNP 0007.scaffold00024 1933929 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1933961 1 . A scaffold2012 ScafM INDEL 0007.scaffold00024 1933963 1 . A scaffold2012 ScafM SNP 0007.scaffold00024 1933978 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1933987 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1933989 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1933994 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934013 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1934035 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1934047 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1934051 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1934064 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1934091 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1934094 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1934132 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1934135 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1934160 1 T . scaffold2012 ScafM SNP 0007.scaffold00024 1934192 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1934194 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1934196 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1934202 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1934227 2 AG GA scaffold2012 ScafM INDEL 0007.scaffold00024 1934246 1 . T scaffold2012 ScafM INDEL 0007.scaffold00024 1934247 5 ..... TTGTT scaffold2012 ScafM INDEL 0007.scaffold00024 1934250 18 .................. TTGCCTACTGTTTTAAAA scaffold2012 ScafM INDEL 0007.scaffold00024 1934253 3 ... ATA scaffold2012 ScafM INDEL 0007.scaffold00024 1934322 4 GCCC .... scaffold2012 ScafM SNP 0007.scaffold00024 1934339 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934349 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1934361 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934398 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1934407 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934450 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1934469 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1934528 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934641 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1934693 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1934703 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1934748 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1934759 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1934795 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1934818 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1934861 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1934871 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1934888 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1934974 1 T C scaffold2012 ReadM SNP 0007.scaffold00024 1935077 1 T C - ReadM INDEL 0007.scaffold00024 1935146 1 A . - ScafM SNP 0007.scaffold00024 1936335 1 C A scaffold12658 ScafM SNP 0007.scaffold00024 1937511 2 CC TA scaffold2012 ScafM INDEL 0007.scaffold00024 1937568 2 .. TT scaffold2012 ScafM SNP 0007.scaffold00024 1937645 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1937696 1 T A scaffold2012 ReadM SNP 0007.scaffold00024 1938146 1 C T - ReadM SNP 0007.scaffold00024 1938165 1 G C - ReadM SNP 0007.scaffold00024 1938190 1 T A - ReadM SNP 0007.scaffold00024 1938238 1 G A - ReadM SNP 0007.scaffold00024 1940169 1 A G - ReadM SNP 0007.scaffold00024 1940184 1 T A - ReadM INDEL 0007.scaffold00024 1940185 1 . C - ReadM SNP 0007.scaffold00024 1940270 1 C T - ReadM INDEL 0007.scaffold00024 1940275 1 . G - ReadM SNP 0007.scaffold00024 1940310 1 C G - ReadM SNP 0007.scaffold00024 1940377 1 C A - ReadM SNP 0007.scaffold00024 1940381 1 C T - ReadM INDEL 0007.scaffold00024 1940492 1 . T - ReadM SNP 0007.scaffold00024 1940560 1 G A - ReadM SNP 0007.scaffold00024 1940647 1 G T - ReadM SNP 0007.scaffold00024 1940653 1 G A - ReadM SNP 0007.scaffold00024 1940717 1 T C - ReadM SNP 0007.scaffold00024 1940855 1 C T - ReadM SNP 0007.scaffold00024 1940897 1 T C - ReadM SNP 0007.scaffold00024 1941277 1 T C - ReadM SNP 0007.scaffold00024 1941317 1 T C - ReadM SNP 0007.scaffold00024 1941483 1 G A - ReadM SNP 0007.scaffold00024 1941486 1 A G - ReadM SNP 0007.scaffold00024 1941563 1 A G - ReadM SNP 0007.scaffold00024 1942058 1 C A - ReadM INDEL 0007.scaffold00024 1942079 1 . G - ReadM SNP 0007.scaffold00024 1942142 1 A G - ReadM SNP 0007.scaffold00024 1942269 1 A G - ReadM SNP 0007.scaffold00024 1942433 1 T C - ReadM SNP 0007.scaffold00024 1942452 1 A G - ReadM SNP 0007.scaffold00024 1942464 1 G A - ReadM SNP 0007.scaffold00024 1942588 1 T G - ReadM SNP 0007.scaffold00024 1942628 1 T C - ReadM SNP 0007.scaffold00024 1942631 1 T C - ReadM INDEL 0007.scaffold00024 1942768 1 G . - ReadM SNP 0007.scaffold00024 1942857 1 T C - ReadM SNP 0007.scaffold00024 1942920 1 A C - ReadM SNP 0007.scaffold00024 1942943 1 C T - ReadM SNP 0007.scaffold00024 1942954 1 C T - ReadM SNP 0007.scaffold00024 1943343 1 T C - ReadM SNP 0007.scaffold00024 1943356 1 T C - ReadM SNP 0007.scaffold00024 1943461 1 G A - ReadM SNP 0007.scaffold00024 1943479 1 T A - ReadM SNP 0007.scaffold00024 1943762 1 T A - ReadM SNP 0007.scaffold00024 1943784 1 T C - ReadM SNP 0007.scaffold00024 1943858 1 A G - ReadM SNP 0007.scaffold00024 1943878 1 C T - ReadM SNP 0007.scaffold00024 1943933 1 A T - ReadM SNP 0007.scaffold00024 1943966 1 T C - ReadM SNP 0007.scaffold00024 1943982 1 G T - ReadM INDEL 0007.scaffold00024 1944825 1 G . - ScafM SNP 0007.scaffold00024 1953055 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1953089 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1953097 1 . T scaffold2012 ScafM SNP 0007.scaffold00024 1953172 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1953185 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1953195 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1953259 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1953263 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1953267 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1953271 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1953278 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1953287 2 CG TA scaffold2012 ScafM SNP 0007.scaffold00024 1953299 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1953301 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1953303 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1953326 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1953341 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1953361 1 A C scaffold2012 ScafM INDEL 0007.scaffold00024 1953365 11 TTTTTTTTGCC ........... scaffold2012 ScafM SNP 0007.scaffold00024 1953387 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1953399 1 T G scaffold2012 ScafM INDEL 0007.scaffold00024 1953443 1 T . scaffold2012 ScafM INDEL 0007.scaffold00024 1953465 6 ...... AAAAAA scaffold2012 ScafM SNP 0007.scaffold00024 1953467 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1953495 2 TC CA scaffold2012 ScafM SNP 0007.scaffold00024 1953505 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1953542 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1953555 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1955260 1 C A scaffold2012 ScafM SNP 0007.scaffold00024 1955268 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1955278 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955280 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955294 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1955298 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955318 1 G T scaffold2012 ScafM SNP 0007.scaffold00024 1955362 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1955366 1 T G scaffold2012 ScafM SNP 0007.scaffold00024 1955374 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1955387 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1955391 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955393 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955418 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955448 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955456 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955460 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955542 1 G T scaffold2012 ScafM SNP 0007.scaffold00024 1955544 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955559 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955571 1 T A scaffold2012 ScafM INDEL 0007.scaffold00024 1955585 5 ..... ACCCA scaffold2012 ScafM SNP 0007.scaffold00024 1955588 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1955596 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1955604 7 ....... ATTGACC scaffold2012 ScafM INDEL 0007.scaffold00024 1955606 6 ...... ATTATA scaffold2012 ScafM SNP 0007.scaffold00024 1955631 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1955633 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955651 1 G C scaffold2012 ScafM SNP 0007.scaffold00024 1955670 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1955673 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1955694 1 G C scaffold2012 Both SNP 0007.scaffold00024 1955757 1 C T scaffold2012 Both SNP 0007.scaffold00024 1955794 1 G T scaffold2012 Both INDEL 0007.scaffold00024 1955865 1 . A scaffold2012 Both SNP 0007.scaffold00024 1955880 1 G T scaffold2012 Both SNP 0007.scaffold00024 1955906 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1955967 1 G A scaffold2012 Both SNP 0007.scaffold00024 1955970 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1955986 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1956041 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1956055 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1956065 1 A T scaffold2012 ScafM INDEL 0007.scaffold00024 1956075 1 T . scaffold2012 ScafM SNP 0007.scaffold00024 1956101 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1956152 1 T C scaffold2012 Both SNP 0007.scaffold00024 1956354 1 T C scaffold2012 Both SNP 0007.scaffold00024 1956374 1 T C scaffold2012 Both SNP 0007.scaffold00024 1956419 1 A T scaffold2012 ScafM INDEL 0007.scaffold00024 1956477 5 TTAAT ..... scaffold2012 ReadM SNP 0007.scaffold00024 1956605 1 C A - ReadM SNP 0007.scaffold00024 1956678 1 C A - ScafM SNP 0007.scaffold00024 1957072 1 T C scaffold2012 ScafM SNP 0007.scaffold00024 1957076 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1957097 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1957105 1 A G scaffold2012 Both SNP 0007.scaffold00024 1957140 1 T A scaffold2012 Both SNP 0007.scaffold00024 1957183 1 C T scaffold2012 Both SNP 0007.scaffold00024 1957495 1 C G scaffold2012 ScafM INDEL 0007.scaffold00024 1957524 1 G . scaffold2012 ScafM SNP 0007.scaffold00024 1957539 1 T C scaffold2012 ScafM INDEL 0007.scaffold00024 1957548 2 CT .. scaffold2012 Both SNP 0007.scaffold00024 1957707 1 T C scaffold2012 Both SNP 0007.scaffold00024 1957817 1 A G scaffold2012 Both SNP 0007.scaffold00024 1957829 1 T C scaffold2012 Both SNP 0007.scaffold00024 1957880 1 A G scaffold2012 Both SNP 0007.scaffold00024 1957886 1 G T scaffold2012 Both SNP 0007.scaffold00024 1957954 1 C T scaffold2012 Both SNP 0007.scaffold00024 1957972 1 C T scaffold2012 Both SNP 0007.scaffold00024 1957975 1 C T scaffold2012 Both SNP 0007.scaffold00024 1958012 1 T A scaffold2012 Both SNP 0007.scaffold00024 1958087 1 C G scaffold2012 Both SNP 0007.scaffold00024 1958096 1 G A scaffold2012 Both SNP 0007.scaffold00024 1958109 1 A G scaffold2012 Both SNP 0007.scaffold00024 1958814 1 A T scaffold2012 Both SNP 0007.scaffold00024 1959009 1 T C scaffold2012 Both SNP 0007.scaffold00024 1959075 1 T A scaffold2012 Both SNP 0007.scaffold00024 1959171 1 A G scaffold2012 Both SNP 0007.scaffold00024 1959637 1 A G scaffold2012 Both SNP 0007.scaffold00024 1959698 1 C T scaffold2012 Both SNP 0007.scaffold00024 1959733 1 T C scaffold2012 Both SNP 0007.scaffold00024 1959812 1 T C scaffold2012 Both SNP 0007.scaffold00024 1959878 1 G A scaffold2012 Both SNP 0007.scaffold00024 1959898 1 G A scaffold2012 Both SNP 0007.scaffold00024 1959992 1 A G scaffold2012 Both SNP 0007.scaffold00024 1960043 1 G A scaffold2012 Both SNP 0007.scaffold00024 1960050 1 G A scaffold2012 Both SNP 0007.scaffold00024 1960058 1 G T scaffold2012 Both SNP 0007.scaffold00024 1960186 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1960204 15 ............... CTTCAGATAATAAGC scaffold2012 Both SNP 0007.scaffold00024 1960222 1 A G scaffold2012 Both SNP 0007.scaffold00024 1960430 1 A T scaffold2012 ScafM SNP 0007.scaffold00024 1960470 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1960474 6 ...... CGACAA scaffold2012 ScafM SNP 0007.scaffold00024 1960502 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1960543 1 A G scaffold2012 ScafM INDEL 0007.scaffold00024 1960576 39 ATTATGAAATGGTGATGTTGTGATTCTGATTGGAGATTC ....................................... scaffold2012 ScafM SNP 0007.scaffold00024 1960632 2 TC CT scaffold2012 Both SNP 0007.scaffold00024 1960665 1 C T scaffold2012 Both SNP 0007.scaffold00024 1960705 1 T G scaffold2012 Both SNP 0007.scaffold00024 1960768 1 C A scaffold2012 ReadM SNP 0007.scaffold00024 1960836 1 C T - ReadM SNP 0007.scaffold00024 1960883 1 A G - ReadM SNP 0007.scaffold00024 1960958 1 C T - ReadM SNP 0007.scaffold00024 1960976 1 T C - ReadM SNP 0007.scaffold00024 1960991 1 C T - Both SNP 0007.scaffold00024 1961102 1 T C scaffold2012 ReadM SNP 0007.scaffold00024 1961208 1 C T - ReadM SNP 0007.scaffold00024 1961249 1 C T - ReadM SNP 0007.scaffold00024 1961295 1 C T - ReadM INDEL 0007.scaffold00024 1961507 1 A . - ScafM INDEL 0007.scaffold00024 1961678 2 AT .. scaffold2012 ScafM SNP 0007.scaffold00024 1961690 1 G A scaffold2012 ScafM INDEL 0007.scaffold00024 1961696 1 G . scaffold2012 ScafM SNP 0007.scaffold00024 1961698 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1961700 1 G C scaffold2012 ScafM INDEL 0007.scaffold00024 1961744 2 .. TT scaffold2012 ScafM SNP 0007.scaffold00024 1961746 1 G T scaffold2012 ScafM SNP 0007.scaffold00024 1961755 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1961773 1 T A scaffold2012 ScafM SNP 0007.scaffold00024 1961777 1 T A scaffold2012 ScafM INDEL 0007.scaffold00024 1961817 1 . G scaffold2012 ScafM SNP 0007.scaffold00024 1961821 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1961862 2 AA TT scaffold2012 ScafM SNP 0007.scaffold00024 1961875 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1961919 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1961927 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1961941 1 G A scaffold2012 ScafM SNP 0007.scaffold00024 1961945 1 A C scaffold2012 ScafM SNP 0007.scaffold00024 1961949 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1961972 1 C G scaffold2012 ScafM SNP 0007.scaffold00024 1962016 1 A G scaffold2012 ScafM SNP 0007.scaffold00024 1962036 1 C T scaffold2012 ScafM SNP 0007.scaffold00024 1962075 1 A G scaffold2012 ReadM SNP 0007.scaffold00024 1963234 1 C T - ReadM SNP 0007.scaffold00024 1963256 1 T C - ReadM SNP 0007.scaffold00024 1963414 1 G T - ReadM SNP 0007.scaffold00024 1963491 1 G A - ReadM SNP 0007.scaffold00024 1963499 1 A G - ReadM INDEL 0007.scaffold00024 1963527 1 . T - ScafM SNP 0007.scaffold00024 1965274 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1965328 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 1965366 1 G A scaffold23915 ScafM INDEL 0007.scaffold00024 1965369 1 T . scaffold23915 ScafM SNP 0007.scaffold00024 1965389 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 1965407 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 1965417 1 T A scaffold23915 ScafM SNP 0007.scaffold00024 1965450 1 A G scaffold23915 ScafM INDEL 0007.scaffold00024 1965470 1 . A scaffold23915 ScafM SNP 0007.scaffold00024 1965502 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1965542 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 1965552 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1965554 2 TG CA scaffold23915 ScafM INDEL 0007.scaffold00024 1965560 1 C . scaffold23915 ScafM SNP 0007.scaffold00024 1965565 1 T G scaffold23915 Both SNP 0007.scaffold00024 1965629 1 G C scaffold23915 Both SNP 0007.scaffold00024 1965676 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 1965724 1 T . scaffold23915 ScafM SNP 0007.scaffold00024 1965751 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1965884 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1965921 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1965923 1 C T scaffold23915 Both INDEL 0007.scaffold00024 1965967 1 . A scaffold23915 Both SNP 0007.scaffold00024 1965991 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1966020 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1966030 2 TA AT scaffold23915 ScafM SNP 0007.scaffold00024 1966047 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1966082 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 1966084 1 C G scaffold23915 ScafM SNP 0007.scaffold00024 1966086 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1966093 2 GG AT scaffold23915 ScafM SNP 0007.scaffold00024 1966106 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1966108 1 G C scaffold23915 ScafM SNP 0007.scaffold00024 1966121 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 1966154 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 1966161 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 1966170 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1966178 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1966184 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 1966195 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1966222 2 TG CA scaffold23915 ScafM SNP 0007.scaffold00024 1966231 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1966251 1 T C scaffold23915 ScafM INDEL 0007.scaffold00024 1966268 5 GGCCC ..... scaffold23915 ScafM SNP 0007.scaffold00024 1966277 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1966302 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 1966306 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1966315 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1966327 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1966364 2 AA TT scaffold23915 ScafM SNP 0007.scaffold00024 1966385 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 1966408 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1966410 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1966413 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1966434 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1966724 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1966747 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1966769 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1979785 1 T C scaffold17921 ScafM SNP 0007.scaffold00024 1979796 2 TA GG scaffold17921 ScafM SNP 0007.scaffold00024 1979809 1 T C scaffold17921 ScafM SNP 0007.scaffold00024 1979820 1 C T scaffold17921 ScafM SNP 0007.scaffold00024 1979822 1 T C scaffold17921 ScafM SNP 0007.scaffold00024 1979827 1 C T scaffold17921 ScafM SNP 0007.scaffold00024 1979834 1 A C scaffold17921 ScafM SNP 0007.scaffold00024 1979859 1 C T scaffold17921 ScafM SNP 0007.scaffold00024 1979868 1 A C scaffold17921 ScafM SNP 0007.scaffold00024 1979871 1 C T scaffold17921 ScafM SNP 0007.scaffold00024 1979892 2 AG GA scaffold17921 ScafM SNP 0007.scaffold00024 1979904 1 A G scaffold17921 ScafM SNP 0007.scaffold00024 1979916 1 T A scaffold17921 ScafM SNP 0007.scaffold00024 1979918 2 TT CG scaffold17921 ScafM SNP 0007.scaffold00024 1979922 1 C T scaffold17921 ScafM SNP 0007.scaffold00024 1979929 1 A C scaffold17921 ScafM SNP 0007.scaffold00024 1979934 1 A G scaffold17921 ScafM SNP 0007.scaffold00024 1979942 1 G C scaffold17921 ScafM SNP 0007.scaffold00024 1979944 1 G T scaffold17921 ScafM INDEL 0007.scaffold00024 1989124 5 TCTCT ..... scaffold23915 ScafM SNP 0007.scaffold00024 1989130 1 T G scaffold23915 ScafM INDEL 0007.scaffold00024 1989167 8 ATTTTACC ........ scaffold23915 ScafM SNP 0007.scaffold00024 1989230 1 T A scaffold23915 ScafM INDEL 0007.scaffold00024 1989414 3 ... TGC scaffold23915 ScafM INDEL 0007.scaffold00024 1989435 3 CAT ... scaffold23915 ScafM SNP 0007.scaffold00024 1989445 1 C T scaffold23915 Both SNP 0007.scaffold00024 1989790 1 G T scaffold23915 Both SNP 0007.scaffold00024 1989800 1 A T scaffold23915 Both SNP 0007.scaffold00024 1990068 1 G C scaffold23915 Both SNP 0007.scaffold00024 1990103 1 G T scaffold23915 Both SNP 0007.scaffold00024 1990121 1 G C scaffold23915 Both SNP 0007.scaffold00024 1990133 1 A G scaffold23915 Both SNP 0007.scaffold00024 1990193 1 T A scaffold23915 ScafM SNP 0007.scaffold00024 1990210 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1990232 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1990243 1 C T scaffold23915 ReadM SNP 0007.scaffold00024 1990858 1 C T - ReadM SNP 0007.scaffold00024 1990909 1 C A - ReadM SNP 0007.scaffold00024 1990920 1 C G - ReadM SNP 0007.scaffold00024 1991170 1 T C - ReadM SNP 0007.scaffold00024 1991361 1 C T - ReadM SNP 0007.scaffold00024 1991379 1 A C - ReadM SNP 0007.scaffold00024 1991420 1 A C - ReadM SNP 0007.scaffold00024 1991460 1 T C - ReadM SNP 0007.scaffold00024 1991501 1 A C - ReadM SNP 0007.scaffold00024 1991654 1 T C - ReadM SNP 0007.scaffold00024 1991662 1 T G - ReadM SNP 0007.scaffold00024 1991704 1 T A - ScafM SNP 0007.scaffold00024 1991814 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1991816 1 G A scaffold23915 ScafM INDEL 0007.scaffold00024 1991820 1 . G scaffold23915 ScafM SNP 0007.scaffold00024 1991827 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1991829 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1991839 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 1991845 1 . A scaffold23915 ScafM SNP 0007.scaffold00024 1991848 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 1991850 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 1991852 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 1991861 2 TA CT scaffold23915 ScafM SNP 0007.scaffold00024 1991864 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1991867 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 1991868 1 . G scaffold23915 ScafM SNP 0007.scaffold00024 1991871 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1991893 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 1991906 2 .. AC scaffold23915 ScafM INDEL 0007.scaffold00024 1991907 1 . C scaffold23915 ScafM SNP 0007.scaffold00024 1991909 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 1991915 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1991924 1 G C scaffold23915 ScafM SNP 0007.scaffold00024 1991933 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1991936 1 T C scaffold23915 Both SNP 0007.scaffold00024 1991942 1 A G scaffold23915 ReadM SNP 0007.scaffold00024 1991977 1 G A - ReadM SNP 0007.scaffold00024 1992058 1 G A - ReadM SNP 0007.scaffold00024 1992064 1 A T - Both SNP 0007.scaffold00024 1992104 1 G A scaffold23915 Both SNP 0007.scaffold00024 1992119 1 G C scaffold23915 ScafM SNP 0007.scaffold00024 1992195 1 C T scaffold23915 ScafM INDEL 0007.scaffold00024 1992205 1 . A scaffold23915 ScafM SNP 0007.scaffold00024 1992230 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1992242 1 T G scaffold23915 Both SNP 0007.scaffold00024 1992272 1 T C scaffold23915 Both SNP 0007.scaffold00024 1992295 1 T C scaffold23915 Both SNP 0007.scaffold00024 1992319 1 A C scaffold23915 Both SNP 0007.scaffold00024 1992451 1 T G scaffold23915 Both SNP 0007.scaffold00024 1992483 1 A G scaffold23915 Both SNP 0007.scaffold00024 1992496 1 G A scaffold23915 Both SNP 0007.scaffold00024 1992532 1 T C scaffold23915 Both SNP 0007.scaffold00024 1992542 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1992596 1 G C scaffold23915 ScafM INDEL 0007.scaffold00024 1992614 1 . G scaffold23915 ScafM SNP 0007.scaffold00024 1992623 2 CA AT scaffold23915 ScafM INDEL 0007.scaffold00024 1992646 1 A . scaffold23915 ScafM SNP 0007.scaffold00024 1992651 1 A G scaffold23915 Both INDEL 0007.scaffold00024 1992749 1 . C scaffold23915 Both SNP 0007.scaffold00024 1992775 1 G A scaffold23915 Both SNP 0007.scaffold00024 1992807 1 G C scaffold23915 ReadM SNP 0007.scaffold00024 1993180 1 G A - ReadM SNP 0007.scaffold00024 1993206 1 C T - ReadM SNP 0007.scaffold00024 1993212 1 C T - ReadM SNP 0007.scaffold00024 1993243 1 T C - Both SNP 0007.scaffold00024 1993313 1 A G scaffold23915 Both SNP 0007.scaffold00024 1993375 1 T G scaffold23915 Both SNP 0007.scaffold00024 1993427 1 G T scaffold23915 Both SNP 0007.scaffold00024 1993486 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1993509 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1993518 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1993525 1 T C scaffold23915 Both SNP 0007.scaffold00024 1993551 1 C A scaffold23915 ReadM SNP 0007.scaffold00024 1993678 1 T C - ReadM SNP 0007.scaffold00024 1993744 1 G T - ReadM INDEL 0007.scaffold00024 1993817 1 C . - ReadM SNP 0007.scaffold00024 1993868 1 A C - ScafM SNP 0007.scaffold00024 1993942 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1993945 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1993952 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1993954 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1993960 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1993989 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 1993996 2 CT TC scaffold23915 ReadM SNP 0007.scaffold00024 1994082 1 C T - ReadM SNP 0007.scaffold00024 1994159 1 T C - ReadM SNP 0007.scaffold00024 1994184 1 G C - ScafM SNP 0007.scaffold00024 1994263 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 1994292 3 TTT CCC scaffold23915 ScafM SNP 0007.scaffold00024 1994304 1 G A scaffold23915 ScafM INDEL 0007.scaffold00024 1994318 2 TT .. scaffold23915 ScafM SNP 0007.scaffold00024 1994343 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1994346 1 T G scaffold23915 Both SNP 0007.scaffold00024 1994412 1 G T scaffold23915 Both SNP 0007.scaffold00024 1994447 1 T C scaffold23915 Both SNP 0007.scaffold00024 1994462 1 A G scaffold23915 ReadM SNP 0007.scaffold00024 1994527 1 C T - ReadM SNP 0007.scaffold00024 1994531 1 T G - ReadM SNP 0007.scaffold00024 1994535 1 T A - ScafM SNP 0007.scaffold00024 1994640 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 1994677 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 1994698 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1994703 2 CC AT scaffold23915 ScafM SNP 0007.scaffold00024 1994710 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1994744 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 1994754 1 C G scaffold23915 ScafM SNP 0007.scaffold00024 1994760 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 1994766 1 C T scaffold23915 Both SNP 0007.scaffold00024 1994792 1 A G scaffold23915 Both SNP 0007.scaffold00024 1994830 1 C T scaffold23915 Both INDEL 0007.scaffold00024 1994916 1 T . scaffold23915 Both SNP 0007.scaffold00024 1995057 1 G A scaffold23915 Both SNP 0007.scaffold00024 1995064 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1995076 1 T C scaffold23915 Both SNP 0007.scaffold00024 1995111 1 C T scaffold23915 Both SNP 0007.scaffold00024 1995129 1 G T scaffold23915 Both SNP 0007.scaffold00024 1995144 1 C T scaffold23915 Both SNP 0007.scaffold00024 1995198 1 A T scaffold23915 Both INDEL 0007.scaffold00024 1995250 2 .. CA scaffold23915 ScafM SNP 0007.scaffold00024 1995269 1 T C scaffold23915 Both SNP 0007.scaffold00024 1995417 1 T C scaffold23915 Both SNP 0007.scaffold00024 1995436 1 A T scaffold23915 Both SNP 0007.scaffold00024 1995481 1 A G scaffold23915 Both SNP 0007.scaffold00024 1995532 1 C A scaffold23915 Both SNP 0007.scaffold00024 1995680 1 T A scaffold23915 Both INDEL 0007.scaffold00024 1995688 1 . A scaffold23915 Both SNP 0007.scaffold00024 1995697 1 A T scaffold23915 Both SNP 0007.scaffold00024 1995786 1 G T scaffold23915 Both SNP 0007.scaffold00024 1995813 1 C T scaffold23915 Both SNP 0007.scaffold00024 1995840 1 T C scaffold23915 Both SNP 0007.scaffold00024 1995864 2 AT GC scaffold23915 Both SNP 0007.scaffold00024 1996017 1 C T scaffold23915 Both SNP 0007.scaffold00024 1996042 1 A T scaffold23915 ReadM SNP 0007.scaffold00024 1996151 1 T C - ReadM SNP 0007.scaffold00024 1996153 1 C A - Both SNP 0007.scaffold00024 1996194 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1996263 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 1996269 1 C G scaffold23915 ScafM SNP 0007.scaffold00024 1996274 1 G C scaffold23915 ScafM SNP 0007.scaffold00024 1996278 2 AT TC scaffold23915 Both SNP 0007.scaffold00024 1996332 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 1996349 1 A T scaffold23915 Both INDEL 0007.scaffold00024 1996552 2 .. TA scaffold23915 Both SNP 0007.scaffold00024 1997350 1 G A scaffold23915 Both INDEL 0007.scaffold00024 1997363 1 . C scaffold23915 Both INDEL 0007.scaffold00024 1997620 2 TT .. scaffold23915 Both SNP 0007.scaffold00024 1997709 1 G A scaffold23915 Both SNP 0007.scaffold00024 1997823 1 C T scaffold23915 Both SNP 0007.scaffold00024 1997961 1 C G scaffold23915 Both SNP 0007.scaffold00024 1998013 1 C G scaffold23915 Both SNP 0007.scaffold00024 1998141 1 T G scaffold23915 Both SNP 0007.scaffold00024 1998180 1 T C scaffold23915 Both SNP 0007.scaffold00024 1998249 1 G C scaffold23915 Both SNP 0007.scaffold00024 1998278 1 A G scaffold23915 ScafM INDEL 0007.scaffold00024 1998391 2 TG .. scaffold23915 Both SNP 0007.scaffold00024 1998403 1 A G scaffold23915 Both SNP 0007.scaffold00024 1998421 1 A C scaffold23915 ScafM INDEL 0007.scaffold00024 1998496 2 .. AT scaffold23915 Both SNP 0007.scaffold00024 1998567 1 G T scaffold23915 ReadM SNP 0007.scaffold00024 1998592 1 C T - ReadM SNP 0007.scaffold00024 1998615 1 T C - ReadM SNP 0007.scaffold00024 1998628 1 A G - ReadM SNP 0007.scaffold00024 1998746 1 T G - ReadM SNP 0007.scaffold00024 1998763 1 A C - ScafM SNP 0007.scaffold00024 2000057 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2000070 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2000084 1 T C scaffold23915 ScafM SNP 0007.scaffold00024 2000195 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 2000197 1 C A scaffold23915 Both SNP 0007.scaffold00024 2000259 1 A T scaffold23915 Both SNP 0007.scaffold00024 2000312 1 T C scaffold23915 Both SNP 0007.scaffold00024 2000494 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2000500 1 C T scaffold23915 Both SNP 0007.scaffold00024 2000574 1 C A scaffold23915 Both INDEL 0007.scaffold00024 2000596 1 A . scaffold23915 Both SNP 0007.scaffold00024 2000601 1 A C scaffold23915 Both SNP 0007.scaffold00024 2000623 1 A T scaffold23915 Both SNP 0007.scaffold00024 2000637 1 T C scaffold23915 Both SNP 0007.scaffold00024 2000681 1 C T scaffold23915 Both SNP 0007.scaffold00024 2000727 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2000742 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2000749 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 2000761 1 T C scaffold23915 Both SNP 0007.scaffold00024 2000792 1 C G scaffold23915 Both SNP 0007.scaffold00024 2000911 1 A G scaffold23915 Both SNP 0007.scaffold00024 2000990 1 G T scaffold23915 Both SNP 0007.scaffold00024 2001000 1 G A scaffold23915 Both SNP 0007.scaffold00024 2001012 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 2001044 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 2001046 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2001077 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2001091 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2001114 1 C A scaffold23915 Both SNP 0007.scaffold00024 2001136 1 T A scaffold23915 Both SNP 0007.scaffold00024 2001141 1 C T scaffold23915 Both SNP 0007.scaffold00024 2001177 1 G A scaffold23915 ReadM SNP 0007.scaffold00024 2001260 1 T A - ReadM SNP 0007.scaffold00024 2001346 1 A C - ReadM SNP 0007.scaffold00024 2001357 1 A G - ReadM SNP 0007.scaffold00024 2001382 1 C T - ReadM SNP 0007.scaffold00024 2001441 1 A T - ReadM SNP 0007.scaffold00024 2001473 1 C T - ReadM SNP 0007.scaffold00024 2001561 1 A G - ReadM SNP 0007.scaffold00024 2001660 1 T G - ReadM SNP 0007.scaffold00024 2001705 1 A G - Both SNP 0007.scaffold00024 2001795 1 G A scaffold23915 Both SNP 0007.scaffold00024 2001822 1 C G scaffold23915 Both SNP 0007.scaffold00024 2001829 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2001866 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2001898 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2001934 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 2001936 1 G T scaffold23915 Both SNP 0007.scaffold00024 2001970 1 G A scaffold23915 Both SNP 0007.scaffold00024 2002001 1 A T scaffold23915 Both SNP 0007.scaffold00024 2002044 1 C A scaffold23915 Both INDEL 0007.scaffold00024 2002121 1 . T scaffold23915 ReadM SNP 0007.scaffold00024 2002191 1 T A - ReadM SNP 0007.scaffold00024 2002209 2 TA CG - ReadM SNP 0007.scaffold00024 2002361 1 G A - ScafM SNP 0007.scaffold00024 2002426 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2002442 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 2002483 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 2002489 1 C T scaffold23915 Both SNP 0007.scaffold00024 2002526 1 G A scaffold23915 Both SNP 0007.scaffold00024 2002529 1 C G scaffold23915 Both SNP 0007.scaffold00024 2002573 1 C T scaffold23915 Both SNP 0007.scaffold00024 2002609 1 C T scaffold23915 Both SNP 0007.scaffold00024 2002646 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2002712 1 A G scaffold23915 ScafM INDEL 0007.scaffold00024 2002724 3 ... GAT scaffold23915 ScafM INDEL 0007.scaffold00024 2002729 2 CA .G scaffold23915 ScafM INDEL 0007.scaffold00024 2002734 1 . C scaffold23915 ScafM INDEL 0007.scaffold00024 2002737 5 ..... TCCGC scaffold23915 ScafM SNP 0007.scaffold00024 2002739 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 2002742 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 2002746 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2002748 7 GGGGGGG CCTTCAT scaffold23915 ScafM SNP 0007.scaffold00024 2002756 1 G C scaffold23915 ScafM INDEL 0007.scaffold00024 2002759 1 . G scaffold23915 ScafM INDEL 0007.scaffold00024 2002762 2 .G AA scaffold23915 ScafM INDEL 0007.scaffold00024 2002766 14 .........TCCTT AGAAGGGGGGGGGG scaffold23915 ScafM SNP 0007.scaffold00024 2002774 1 C G scaffold23915 ScafM SNP 0007.scaffold00024 2002786 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 2002790 1 G A scaffold23915 ScafM SNP 0007.scaffold00024 2002793 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2002807 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 2002831 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 2002848 1 C A scaffold23915 ScafM SNP 0007.scaffold00024 2002875 1 C T scaffold23915 Both SNP 0007.scaffold00024 2002888 1 T G scaffold23915 Both SNP 0007.scaffold00024 2002930 1 T C scaffold23915 Both SNP 0007.scaffold00024 2002948 1 G C scaffold23915 Both SNP 0007.scaffold00024 2002976 1 T A scaffold23915 Both SNP 0007.scaffold00024 2003117 1 G T scaffold23915 Both SNP 0007.scaffold00024 2003147 1 T C scaffold23915 Both SNP 0007.scaffold00024 2003265 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2003326 1 A C scaffold23915 ScafM SNP 0007.scaffold00024 2003339 1 A G scaffold23915 Both SNP 0007.scaffold00024 2003356 1 A T scaffold23915 Both SNP 0007.scaffold00024 2003367 1 C A scaffold23915 Both SNP 0007.scaffold00024 2003429 1 G A scaffold23915 Both SNP 0007.scaffold00024 2003452 1 G A scaffold23915 ReadM SNP 0007.scaffold00024 2003568 1 T C - ScafM SNP 0007.scaffold00024 2003644 1 T G scaffold23915 ScafM SNP 0007.scaffold00024 2003684 1 A G scaffold23915 ScafM INDEL 0007.scaffold00024 2003703 3 ATG ... scaffold23915 ScafM SNP 0007.scaffold00024 2003719 2 AC TA scaffold23915 ScafM INDEL 0007.scaffold00024 2003792 9 ......... TCTTTTTAT scaffold23915 ScafM SNP 0007.scaffold00024 2003873 1 G T scaffold23915 ScafM INDEL 0007.scaffold00024 2003895 5 ....C GTTTT scaffold23915 ScafM SNP 0007.scaffold00024 2003908 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 2003917 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2003926 1 C A scaffold23915 ScafM INDEL 0007.scaffold00024 2003952 3 ... GTC scaffold23915 ScafM INDEL 0007.scaffold00024 2003953 1 . T scaffold23915 ScafM SNP 0007.scaffold00024 2003955 1 G A scaffold23915 ScafM INDEL 0007.scaffold00024 2003957 2 .. AG scaffold23915 ScafM SNP 0007.scaffold00024 2003993 1 G C scaffold23915 ReadM SNP 0007.scaffold00024 2005694 1 A C - ReadM SNP 0007.scaffold00024 2005803 2 CC AG - ReadM SNP 0007.scaffold00024 2005829 1 A C - ReadM SNP 0007.scaffold00024 2005851 1 G A - ReadM SNP 0007.scaffold00024 2005859 1 G A - Both SNP 0007.scaffold00024 2006083 1 G A scaffold23915 ReadM SNP 0007.scaffold00024 2006228 1 G A - ScafM SNP 0007.scaffold00024 2006510 2 TG CC scaffold23915 Both SNP 0007.scaffold00024 2006594 1 C A scaffold23915 Both SNP 0007.scaffold00024 2006602 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2006637 1 C G scaffold23915 ScafM SNP 0007.scaffold00024 2006648 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2006660 1 A T scaffold23915 ScafM SNP 0007.scaffold00024 2006693 1 A G scaffold23915 ScafM SNP 0007.scaffold00024 2006719 1 C T scaffold23915 ScafM SNP 0007.scaffold00024 2006829 1 T A scaffold23915 ScafM SNP 0007.scaffold00024 2006855 2 GT TG scaffold23915 ScafM SNP 0007.scaffold00024 2006884 1 G T scaffold23915 ScafM SNP 0007.scaffold00024 2007160 1 A G scaffold14474 ScafM SNP 0007.scaffold00024 2007181 1 A G scaffold14474 ScafM SNP 0007.scaffold00024 2007186 2 AG GA scaffold14474 ScafM SNP 0007.scaffold00024 2007190 1 C T scaffold14474 ScafM SNP 0007.scaffold00024 2007193 1 C A scaffold14474 ScafM SNP 0008.scaffold00029 8 1 T C scaffold1459 ScafM SNP 0008.scaffold00029 59 1 G A scaffold1459 ScafM SNP 0008.scaffold00029 105 1 A G scaffold1459 ScafM SNP 0008.scaffold00029 111 1 G C scaffold1459 ScafM SNP 0008.scaffold00029 124 1 T G scaffold1459 ScafM SNP 0008.scaffold00029 263 1 T C scaffold1459 ScafM SNP 0008.scaffold00029 275 1 G A scaffold1459 ScafM SNP 0008.scaffold00029 282 1 G T scaffold1459 ScafM SNP 0008.scaffold00029 296 1 T C scaffold1459 ScafM SNP 0008.scaffold00029 330 1 C T scaffold1459 ScafM SNP 0008.scaffold00029 365 1 C T scaffold1459 ScafM SNP 0008.scaffold00029 383 1 A C scaffold1459 ScafM SNP 0008.scaffold00029 394 2 GC TA scaffold1459 ScafM SNP 0008.scaffold00029 414 1 T G scaffold1459 ScafM SNP 0008.scaffold00029 419 1 G C scaffold1459 ScafM SNP 0008.scaffold00029 422 1 A T scaffold1459 ScafM SNP 0008.scaffold00029 437 1 G T scaffold1459 ScafM SNP 0008.scaffold00029 444 1 A T scaffold1459 ScafM SNP 0008.scaffold00029 460 1 G A scaffold1459 ScafM SNP 0008.scaffold00029 470 2 TA AT scaffold1459 ScafM SNP 0008.scaffold00029 498 1 C T scaffold1459 ScafM SNP 0008.scaffold00029 566 1 A T scaffold1459 ScafM INDEL 0008.scaffold00029 2872 2 .. TA scaffold6012 ScafM SNP 0008.scaffold00029 2880 1 G C scaffold6012 ScafM SNP 0008.scaffold00029 2887 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 2979 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 2981 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 3007 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 3035 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 3088 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 3092 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 3128 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 3151 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 3169 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 3203 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 3205 1 G C scaffold6012 ReadM SNP 0008.scaffold00029 3276 1 G T - ReadM SNP 0008.scaffold00029 3302 1 T G - ReadM SNP 0008.scaffold00029 3347 1 T C - ReadM INDEL 0008.scaffold00029 3415 1 A . - ReadM SNP 0008.scaffold00029 3441 1 G C - ReadM SNP 0008.scaffold00029 3496 1 C A - ReadM SNP 0008.scaffold00029 3912 1 A C - ReadM SNP 0008.scaffold00029 4488 1 C T - ReadM SNP 0008.scaffold00029 4508 1 C A - ScafM SNP 0008.scaffold00029 4612 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 4617 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 4635 2 GT AC scaffold6012 ReadM SNP 0008.scaffold00029 4794 1 C A - ScafM SNP 0008.scaffold00029 4892 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 4914 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 4936 1 G C scaffold6012 Both SNP 0008.scaffold00029 4975 1 C T scaffold6012 Both SNP 0008.scaffold00029 4987 1 A G scaffold6012 Both SNP 0008.scaffold00029 5049 1 T G scaffold6012 ReadM INDEL 0008.scaffold00029 5093 1 G . - Both INDEL 0008.scaffold00029 5432 1 T . scaffold6012 ScafM SNP 0008.scaffold00029 5477 1 G A scaffold6012 ReadM SNP 0008.scaffold00029 5491 1 T C - ReadM SNP 0008.scaffold00029 5567 1 A T - ReadM SNP 0008.scaffold00029 5592 1 G C - ReadM SNP 0008.scaffold00029 5625 1 A G - ReadM INDEL 0008.scaffold00029 5641 1 A . - ReadM SNP 0008.scaffold00029 5720 1 G T - ReadM SNP 0008.scaffold00029 5743 1 G A - ReadM SNP 0008.scaffold00029 5789 1 T C - ReadM SNP 0008.scaffold00029 5864 1 A C - ReadM SNP 0008.scaffold00029 5946 1 G A - ReadM SNP 0008.scaffold00029 5955 1 A G - ReadM SNP 0008.scaffold00029 5960 1 G T - ReadM SNP 0008.scaffold00029 6146 1 T C - ReadM INDEL 0008.scaffold00029 6277 1 . A - ReadM SNP 0008.scaffold00029 6344 1 T C - ReadM SNP 0008.scaffold00029 6354 1 A G - ReadM SNP 0008.scaffold00029 6475 1 G A - ReadM SNP 0008.scaffold00029 6504 1 T C - ReadM SNP 0008.scaffold00029 6514 1 C A - ReadM SNP 0008.scaffold00029 6566 1 T C - ReadM SNP 0008.scaffold00029 6578 1 T C - ReadM SNP 0008.scaffold00029 6602 1 C T - ReadM SNP 0008.scaffold00029 6654 1 C T - ReadM SNP 0008.scaffold00029 6669 1 G A - ReadM SNP 0008.scaffold00029 6695 1 T C - ReadM INDEL 0008.scaffold00029 6719 1 A . - ReadM SNP 0008.scaffold00029 6734 1 C T - ReadM SNP 0008.scaffold00029 6859 1 C G - ReadM SNP 0008.scaffold00029 6888 1 A G - ReadM SNP 0008.scaffold00029 6901 1 G A - ReadM SNP 0008.scaffold00029 6992 1 C T - ReadM SNP 0008.scaffold00029 7276 1 C T - ReadM SNP 0008.scaffold00029 7351 1 A G - ReadM SNP 0008.scaffold00029 7375 1 A G - ReadM SNP 0008.scaffold00029 7391 1 C T - ReadM SNP 0008.scaffold00029 7404 1 G T - ReadM SNP 0008.scaffold00029 7493 1 G A - ReadM SNP 0008.scaffold00029 7529 1 T A - ReadM SNP 0008.scaffold00029 7539 1 G A - ReadM SNP 0008.scaffold00029 7647 1 T C - ReadM SNP 0008.scaffold00029 7688 1 C T - ReadM SNP 0008.scaffold00029 7722 1 G A - ReadM SNP 0008.scaffold00029 7732 1 A C - ReadM SNP 0008.scaffold00029 7828 1 T G - ReadM SNP 0008.scaffold00029 7859 1 C G - ReadM SNP 0008.scaffold00029 7864 1 A G - ReadM SNP 0008.scaffold00029 8007 2 AA CG - ReadM SNP 0008.scaffold00029 8051 1 G A - ReadM SNP 0008.scaffold00029 8071 1 T G - ReadM SNP 0008.scaffold00029 8076 1 G C - ReadM SNP 0008.scaffold00029 8285 1 T C - ReadM INDEL 0008.scaffold00029 8413 2 TA .. - ReadM SNP 0008.scaffold00029 8424 1 C A - ReadM SNP 0008.scaffold00029 8480 1 T G - ReadM SNP 0008.scaffold00029 8530 1 G A - ReadM SNP 0008.scaffold00029 8650 1 T G - ReadM SNP 0008.scaffold00029 8704 1 T C - ReadM SNP 0008.scaffold00029 8781 1 A G - ReadM SNP 0008.scaffold00029 8938 1 G A - ReadM SNP 0008.scaffold00029 9010 1 A G - ReadM SNP 0008.scaffold00029 9014 1 C A - ReadM SNP 0008.scaffold00029 9019 1 T G - ReadM SNP 0008.scaffold00029 9086 1 G C - ReadM SNP 0008.scaffold00029 9137 1 T A - ReadM INDEL 0008.scaffold00029 9310 1 G . - Both SNP 0008.scaffold00029 9330 1 T C scaffold6012 Both SNP 0008.scaffold00029 9341 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 9379 2 TG AT scaffold6012 ScafM SNP 0008.scaffold00029 9404 2 AT CA scaffold6012 ScafM SNP 0008.scaffold00029 9431 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 9470 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 9536 2 AA CG scaffold6012 ScafM INDEL 0008.scaffold00029 9544 2 GA .T scaffold6012 ScafM SNP 0008.scaffold00029 9550 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 9565 1 G A scaffold6012 ReadM SNP 0008.scaffold00029 9777 1 T A - ReadM INDEL 0008.scaffold00029 9830 1 . T - ScafM SNP 0008.scaffold00029 10089 1 A G scaffold6012 Both SNP 0008.scaffold00029 10098 1 C A scaffold6012 Both SNP 0008.scaffold00029 10248 1 T C scaffold6012 Both SNP 0008.scaffold00029 10258 1 T C scaffold6012 ReadM SNP 0008.scaffold00029 10302 1 A T - ReadM SNP 0008.scaffold00029 10468 1 A G - ReadM SNP 0008.scaffold00029 10473 1 G T - ReadM INDEL 0008.scaffold00029 10479 1 A . - Both SNP 0008.scaffold00029 10743 1 T G scaffold6012 Both SNP 0008.scaffold00029 10795 1 T G scaffold6012 Both SNP 0008.scaffold00029 10892 1 T A scaffold6012 Both SNP 0008.scaffold00029 10905 1 A C scaffold6012 ScafM INDEL 0008.scaffold00029 10926 7 ACTCGTA ....... scaffold6012 ScafM SNP 0008.scaffold00029 11031 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 11041 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 11043 1 C T scaffold6012 ScafM INDEL 0008.scaffold00029 11086 2 GA .T scaffold6012 ScafM SNP 0008.scaffold00029 11111 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 11125 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 11166 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 11217 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 11240 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 11256 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 11272 1 T C scaffold6012 ScafM INDEL 0008.scaffold00029 11274 1 . G scaffold6012 ScafM SNP 0008.scaffold00029 11288 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 11295 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 11359 1 G C scaffold6012 ScafM SNP 0008.scaffold00029 11380 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 11399 1 T C scaffold6012 ScafM INDEL 0008.scaffold00029 11414 1 . T scaffold6012 ScafM SNP 0008.scaffold00029 13576 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 13582 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 13629 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 13632 1 A T scaffold6012 ScafM SNP 0008.scaffold00029 13634 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 13643 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 13680 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 13696 1 A C scaffold6012 ScafM INDEL 0008.scaffold00029 13758 1 . G scaffold6012 ScafM SNP 0008.scaffold00029 13780 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 13797 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 13805 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 13822 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 13861 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 13864 1 C G scaffold6012 ScafM SNP 0008.scaffold00029 13870 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 13887 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 13890 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 13897 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 13905 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 13926 1 T C scaffold6012 ScafM INDEL 0008.scaffold00029 13943 2 TT .. scaffold6012 ScafM SNP 0008.scaffold00029 13946 1 T G scaffold6012 ScafM SNP 0008.scaffold00029 13957 1 A T scaffold6012 ScafM SNP 0008.scaffold00029 14008 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 14287 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 14290 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 14320 2 AT GC scaffold6012 ScafM SNP 0008.scaffold00029 14867 1 A T scaffold6012 ScafM SNP 0008.scaffold00029 14898 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 14923 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 14937 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 14941 1 T A scaffold6012 ScafM INDEL 0008.scaffold00029 14965 1 . A scaffold6012 ScafM INDEL 0008.scaffold00029 14972 3 ... AAC scaffold6012 ScafM SNP 0008.scaffold00029 14997 1 C A scaffold6012 ScafM SNP 0008.scaffold00029 15033 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15039 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 15048 1 G C scaffold6012 ScafM INDEL 0008.scaffold00029 15067 1 . T scaffold6012 ScafM SNP 0008.scaffold00029 15069 2 GT AC scaffold6012 ScafM SNP 0008.scaffold00029 15099 1 C G scaffold6012 ScafM SNP 0008.scaffold00029 15116 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 15128 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15173 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 15569 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 15582 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15594 1 A C scaffold6012 ScafM SNP 0008.scaffold00029 15604 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15610 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 15623 1 A C scaffold6012 ScafM INDEL 0008.scaffold00029 15679 3 TTT ..A scaffold6012 ScafM SNP 0008.scaffold00029 15707 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 15723 1 G A scaffold6012 ScafM INDEL 0008.scaffold00029 15726 6 TAACTA ...... scaffold6012 ScafM SNP 0008.scaffold00029 15746 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 15767 1 T A scaffold6012 ScafM SNP 0008.scaffold00029 15774 1 A G scaffold6012 ScafM INDEL 0008.scaffold00029 15780 1 T . scaffold6012 ScafM SNP 0008.scaffold00029 15842 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 15844 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 15848 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 15867 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15869 1 G A scaffold6012 ScafM SNP 0008.scaffold00029 15871 1 A T scaffold6012 ScafM INDEL 0008.scaffold00029 15878 3 TAA ... scaffold6012 ScafM SNP 0008.scaffold00029 15903 1 C T scaffold6012 ScafM SNP 0008.scaffold00029 15941 1 G T scaffold6012 ScafM SNP 0008.scaffold00029 15948 2 AT TC scaffold6012 ScafM INDEL 0008.scaffold00029 15960 1 . G scaffold6012 ScafM SNP 0008.scaffold00029 16165 1 A T scaffold6012 ScafM SNP 0008.scaffold00029 16194 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 16199 1 T C scaffold6012 ScafM SNP 0008.scaffold00029 16206 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 16217 1 A G scaffold6012 ScafM INDEL 0008.scaffold00029 16229 7 CGATGAA ....... scaffold6012 ScafM INDEL 0008.scaffold00029 16238 7 CCGGCGG ....... scaffold6012 ScafM INDEL 0008.scaffold00029 16246 1 A . scaffold6012 ScafM INDEL 0008.scaffold00029 16248 4 GAGC .... scaffold6012 Both SNP 0008.scaffold00029 16286 1 C T scaffold6012 Both SNP 0008.scaffold00029 16304 1 A G scaffold6012 ScafM SNP 0008.scaffold00029 17609 1 C T scaffold22727 ReadM SNP 0008.scaffold00029 18181 1 C T - ReadM INDEL 0008.scaffold00029 18197 1 C . - Both SNP 0008.scaffold00029 18240 1 C T scaffold22727 Both SNP 0008.scaffold00029 18298 1 G C scaffold22727 ScafM SNP 0008.scaffold00029 18343 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 18373 1 T A scaffold22727 ScafM INDEL 0008.scaffold00029 18418 5 ..... ATAAC scaffold22727 ScafM SNP 0008.scaffold00029 18422 1 C T scaffold22727 ScafM INDEL 0008.scaffold00029 18498 7 CAAAAAA ....... scaffold22727 ScafM INDEL 0008.scaffold00029 18582 3 ACA ... scaffold22727 ScafM SNP 0008.scaffold00029 18589 1 G A scaffold22727 ScafM SNP 0008.scaffold00029 18595 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 18600 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 18606 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 18625 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 18629 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 18686 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 18991 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 19007 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 19047 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 19054 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 19056 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 19091 1 G C scaffold22727 ScafM SNP 0008.scaffold00029 25183 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 25312 1 C A scaffold22727 ScafM SNP 0008.scaffold00029 25322 1 G T scaffold22727 Both SNP 0008.scaffold00029 25454 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 26013 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 26243 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 26262 1 A G scaffold22727 ScafM INDEL 0008.scaffold00029 26285 1 . C scaffold22727 ScafM INDEL 0008.scaffold00029 26294 9 AACAAGAGC ......... scaffold22727 ScafM INDEL 0008.scaffold00029 26304 1 T . scaffold22727 ScafM SNP 0008.scaffold00029 26310 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 26344 1 C A scaffold22727 ScafM SNP 0008.scaffold00029 26360 2 GG AA scaffold22727 ScafM SNP 0008.scaffold00029 26363 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 26384 1 G A scaffold22727 ScafM SNP 0008.scaffold00029 26967 1 G A scaffold22727 ScafM SNP 0008.scaffold00029 26989 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 27018 1 C G scaffold22727 ScafM SNP 0008.scaffold00029 27203 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 27208 1 C A scaffold22727 ScafM SNP 0008.scaffold00029 27221 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 27230 1 G A scaffold22727 ScafM SNP 0008.scaffold00029 27236 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 27243 1 A T scaffold22727 ScafM SNP 0008.scaffold00029 27247 1 A T scaffold22727 ScafM SNP 0008.scaffold00029 27249 1 T G scaffold22727 ScafM SNP 0008.scaffold00029 27292 1 A C scaffold22727 ScafM SNP 0008.scaffold00029 27298 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 27334 1 C A scaffold22727 ScafM SNP 0008.scaffold00029 27355 1 C T scaffold22727 ScafM SNP 0008.scaffold00029 27384 1 A T scaffold22727 ScafM INDEL 0008.scaffold00029 27397 1 . A scaffold22727 ScafM SNP 0008.scaffold00029 27410 1 G C scaffold22727 ScafM SNP 0008.scaffold00029 27419 1 T C scaffold22727 Both INDEL 0008.scaffold00029 27448 1 . A scaffold22727 ScafM INDEL 0008.scaffold00029 28135 1 G . scaffold22727 ScafM SNP 0008.scaffold00029 28181 1 A C scaffold22727 ScafM SNP 0008.scaffold00029 28185 1 G C scaffold22727 ScafM SNP 0008.scaffold00029 28210 1 T G scaffold22727 ScafM SNP 0008.scaffold00029 28452 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 29062 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 29068 1 G T scaffold22727 Both SNP 0008.scaffold00029 29101 1 C A scaffold22727 Both INDEL 0008.scaffold00029 29119 1 . T scaffold22727 ReadM INDEL 0008.scaffold00029 29410 2 .. TT - ReadM SNP 0008.scaffold00029 29437 1 G A - Both SNP 0008.scaffold00029 29541 1 T C scaffold22727 Both SNP 0008.scaffold00029 29691 1 C G scaffold22727 ScafM INDEL 0008.scaffold00029 29735 6 ...... TACTAA scaffold22727 ScafM INDEL 0008.scaffold00029 29737 2 .. AA scaffold22727 ScafM INDEL 0008.scaffold00029 29769 1 T . scaffold22727 Both SNP 0008.scaffold00029 29809 1 G C scaffold22727 Both SNP 0008.scaffold00029 29822 1 C T scaffold22727 Both SNP 0008.scaffold00029 29849 1 C T scaffold22727 Both SNP 0008.scaffold00029 29942 1 C A scaffold22727 Both SNP 0008.scaffold00029 29977 1 C T scaffold22727 Both SNP 0008.scaffold00029 29999 1 T C scaffold22727 ReadM SNP 0008.scaffold00029 30070 1 C T - ScafM SNP 0008.scaffold00029 30132 1 T A scaffold22727 ScafM SNP 0008.scaffold00029 30135 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 30139 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 30152 1 T C scaffold22727 ScafM SNP 0008.scaffold00029 30176 1 A G scaffold22727 ScafM SNP 0008.scaffold00029 31505 1 A G scaffold16325 ReadM SNP 0008.scaffold00029 36396 1 T C - ReadM SNP 0008.scaffold00029 36423 1 T C - ReadM SNP 0008.scaffold00029 36458 1 T C - ReadM SNP 0008.scaffold00029 36884 1 T A - ReadM SNP 0008.scaffold00029 36904 1 A C - ReadM SNP 0008.scaffold00029 36949 1 G A - ScafM INDEL 0008.scaffold00029 37018 1 . C scaffold16325 ScafM SNP 0008.scaffold00029 37024 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 37046 1 G C scaffold16325 ScafM SNP 0008.scaffold00029 37083 1 C T scaffold16325 ReadM SNP 0008.scaffold00029 38307 1 G C - ReadM SNP 0008.scaffold00029 38313 1 T A - ReadM SNP 0008.scaffold00029 38466 1 C T - ReadM SNP 0008.scaffold00029 38483 1 A C - Both SNP 0008.scaffold00029 38600 1 T G scaffold16325 Both SNP 0008.scaffold00029 38649 1 T C scaffold16325 Both SNP 0008.scaffold00029 38706 1 A G scaffold16325 Both SNP 0008.scaffold00029 38799 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 38823 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 38826 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 54976 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 55021 1 T C scaffold16325 Both SNP 0008.scaffold00029 55249 1 T C scaffold16325 Both SNP 0008.scaffold00029 55306 1 T A scaffold16325 Both SNP 0008.scaffold00029 55444 1 G T scaffold16325 Both SNP 0008.scaffold00029 55463 1 C A scaffold16325 ReadM INDEL 0008.scaffold00029 55655 1 . A - ScafM INDEL 0008.scaffold00029 55655 2 .T AC scaffold16325 ScafM SNP 0008.scaffold00029 55853 1 A C scaffold16325 Both INDEL 0008.scaffold00029 55858 2 AT .. scaffold16325 Both SNP 0008.scaffold00029 56066 1 T C scaffold16325 Both SNP 0008.scaffold00029 56076 1 C T scaffold16325 Both SNP 0008.scaffold00029 56682 1 A C scaffold16325 ScafM INDEL 0008.scaffold00029 56833 1 . T scaffold16325 ScafM SNP 0008.scaffold00029 56846 1 C T scaffold16325 ScafM INDEL 0008.scaffold00029 56853 5 TCTGA ..... scaffold16325 ScafM SNP 0008.scaffold00029 57936 1 T C scaffold16325 ScafM INDEL 0008.scaffold00029 57947 1 A . scaffold16325 ScafM SNP 0008.scaffold00029 57956 1 T C scaffold16325 ScafM INDEL 0008.scaffold00029 57964 1 C . scaffold16325 ScafM SNP 0008.scaffold00029 57983 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 57985 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 57988 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 57999 1 C A scaffold16325 ScafM SNP 0008.scaffold00029 58006 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 58036 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 58038 2 CA TG scaffold16325 ScafM INDEL 0008.scaffold00029 58045 18 .................. CTTATATATTGTCCTCGC scaffold16325 ScafM INDEL 0008.scaffold00029 58048 6 ...... TGTTGA scaffold16325 ScafM INDEL 0008.scaffold00029 58052 3 ... TAA scaffold16325 ScafM INDEL 0008.scaffold00029 58053 1 . C scaffold16325 ScafM SNP 0008.scaffold00029 58055 1 T C scaffold16325 ScafM INDEL 0008.scaffold00029 58076 1 A . scaffold16325 ScafM SNP 0008.scaffold00029 58097 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 58102 1 G A scaffold16325 ScafM INDEL 0008.scaffold00029 58123 1 . A scaffold16325 ScafM SNP 0008.scaffold00029 58139 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 58142 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 58159 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 58163 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 58170 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 58557 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 58585 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 58594 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 58636 1 A G scaffold16325 ScafM INDEL 0008.scaffold00029 58681 1 . T scaffold16325 ScafM SNP 0008.scaffold00029 58713 1 G A scaffold16325 Both SNP 0008.scaffold00029 58827 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 58869 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 58876 1 A C scaffold16325 ScafM INDEL 0008.scaffold00029 58896 1 T . scaffold16325 ScafM SNP 0008.scaffold00029 58902 1 A C scaffold16325 Both SNP 0008.scaffold00029 58936 1 A G scaffold16325 Both SNP 0008.scaffold00029 58966 1 T C scaffold16325 Both SNP 0008.scaffold00029 59029 1 C T scaffold16325 Both SNP 0008.scaffold00029 59052 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 59144 1 A G scaffold16325 ScafM INDEL 0008.scaffold00029 59146 1 T . scaffold16325 ScafM SNP 0008.scaffold00029 59149 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 59179 2 AT TC scaffold16325 Both SNP 0008.scaffold00029 59199 1 A G scaffold16325 Both SNP 0008.scaffold00029 59244 1 C T scaffold16325 Both SNP 0008.scaffold00029 59273 1 G A scaffold16325 Both SNP 0008.scaffold00029 59316 1 A G scaffold16325 Both SNP 0008.scaffold00029 59377 1 A T scaffold16325 Both SNP 0008.scaffold00029 59514 1 A G scaffold16325 Both SNP 0008.scaffold00029 59602 1 T C scaffold16325 Both SNP 0008.scaffold00029 59885 1 T A scaffold16325 Both SNP 0008.scaffold00029 60339 1 C A scaffold16325 Both SNP 0008.scaffold00029 60436 1 G A scaffold16325 Both INDEL 0008.scaffold00029 60453 1 A . scaffold16325 Both SNP 0008.scaffold00029 60503 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 60773 2 TA GT scaffold16325 ScafM SNP 0008.scaffold00029 60776 1 A T scaffold16325 Both SNP 0008.scaffold00029 60856 1 G T scaffold16325 Both SNP 0008.scaffold00029 60988 1 T C scaffold16325 Both SNP 0008.scaffold00029 61139 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 61453 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 61460 1 G T scaffold16325 Both SNP 0008.scaffold00029 62099 1 T A scaffold16325 ReadM SNP 0008.scaffold00029 62344 1 A G - ReadM SNP 0008.scaffold00029 62357 1 A G - ReadM SNP 0008.scaffold00029 62386 1 T C - ReadM SNP 0008.scaffold00029 62472 1 A G - ReadM SNP 0008.scaffold00029 62479 1 C T - ReadM INDEL 0008.scaffold00029 62495 1 T . - ReadM INDEL 0008.scaffold00029 62547 2 CT .. - Both SNP 0008.scaffold00029 62764 1 C T scaffold16325 ReadM SNP 0008.scaffold00029 62966 1 G T - ReadM SNP 0008.scaffold00029 62970 1 T A - Both SNP 0008.scaffold00029 63031 1 A C scaffold16325 Both SNP 0008.scaffold00029 63045 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 63072 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 63090 1 T C scaffold16325 Both SNP 0008.scaffold00029 63258 1 C T scaffold16325 Both SNP 0008.scaffold00029 63264 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 63286 1 G A scaffold16325 Both SNP 0008.scaffold00029 63650 1 A G scaffold16325 Both SNP 0008.scaffold00029 63669 1 G C scaffold16325 Both SNP 0008.scaffold00029 63985 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 64111 1 A G scaffold16325 Both SNP 0008.scaffold00029 64214 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 64216 1 C A scaffold16325 Both SNP 0008.scaffold00029 64415 1 T C scaffold16325 Both SNP 0008.scaffold00029 64453 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 64549 1 T G scaffold16325 Both SNP 0008.scaffold00029 64825 1 A T scaffold16325 Both SNP 0008.scaffold00029 64855 1 C T scaffold16325 Both SNP 0008.scaffold00029 64871 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 64951 1 G T scaffold16325 ScafM INDEL 0008.scaffold00029 64952 4 .... ACCA scaffold16325 ScafM SNP 0008.scaffold00029 64975 1 T C scaffold16325 Both SNP 0008.scaffold00029 65070 1 A G scaffold16325 Both SNP 0008.scaffold00029 65157 1 C T scaffold16325 Both SNP 0008.scaffold00029 65238 1 C A scaffold16325 Both SNP 0008.scaffold00029 65260 1 C T scaffold16325 Both INDEL 0008.scaffold00029 65389 1 . T scaffold16325 ScafM SNP 0008.scaffold00029 65398 1 G T scaffold16325 Both SNP 0008.scaffold00029 65651 1 C T scaffold16325 Both SNP 0008.scaffold00029 65784 2 AA TT scaffold16325 Both SNP 0008.scaffold00029 65927 1 C T scaffold16325 ReadM INDEL 0008.scaffold00029 66028 1 . T - Both INDEL 0008.scaffold00029 66184 1 G . scaffold16325 Both SNP 0008.scaffold00029 66249 1 T A scaffold16325 ScafM INDEL 0008.scaffold00029 66306 2 .. TG scaffold16325 ReadM INDEL 0008.scaffold00029 66311 2 .. GA - ScafM SNP 0008.scaffold00029 66423 2 AT GC scaffold16325 Both SNP 0008.scaffold00029 66736 1 A C scaffold16325 Both SNP 0008.scaffold00029 66870 1 T C scaffold16325 Both SNP 0008.scaffold00029 67034 1 C T scaffold16325 Both SNP 0008.scaffold00029 67075 1 A T scaffold16325 Both INDEL 0008.scaffold00029 67226 1 A . scaffold16325 ScafM INDEL 0008.scaffold00029 67330 7 CAGCTAT ....... scaffold16325 Both SNP 0008.scaffold00029 67465 1 T C scaffold16325 ReadM SNP 0008.scaffold00029 67656 1 C G - ReadM SNP 0008.scaffold00029 67675 1 C T - ReadM SNP 0008.scaffold00029 67771 1 A T - ReadM SNP 0008.scaffold00029 67780 1 A C - Both SNP 0008.scaffold00029 67890 1 T C scaffold16325 Both SNP 0008.scaffold00029 67902 1 T C scaffold16325 Both SNP 0008.scaffold00029 67962 1 A G scaffold16325 ReadM SNP 0008.scaffold00029 67996 1 C T - ReadM SNP 0008.scaffold00029 68234 1 C T - ReadM SNP 0008.scaffold00029 68339 1 G A - ReadM SNP 0008.scaffold00029 68552 1 A T - ScafM SNP 0008.scaffold00029 69628 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 69630 1 C T scaffold16325 ScafM INDEL 0008.scaffold00029 69658 11 ACAAAGAAGCA ........... scaffold16325 ScafM SNP 0008.scaffold00029 69685 1 G T scaffold16325 ScafM SNP 0008.scaffold00029 69713 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 69751 1 C G scaffold16325 ScafM SNP 0008.scaffold00029 69763 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 69796 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 69931 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 70027 1 C T scaffold16325 ScafM INDEL 0008.scaffold00029 70478 7 ....... AGTGAGT scaffold16325 Both SNP 0008.scaffold00029 70519 1 T G scaffold16325 ReadM SNP 0008.scaffold00029 70651 1 T G - ReadM SNP 0008.scaffold00029 70742 1 T C - ReadM SNP 0008.scaffold00029 70782 1 A G - ReadM INDEL 0008.scaffold00029 71178 1 A . - Both SNP 0008.scaffold00029 71500 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 71564 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 71595 1 G C scaffold16325 ScafM SNP 0008.scaffold00029 71625 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 71645 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 71718 1 G C scaffold16325 ScafM SNP 0008.scaffold00029 71735 1 A G scaffold16325 ReadM SNP 0008.scaffold00029 74881 1 C A - ReadM SNP 0008.scaffold00029 74895 1 G A - ReadM SNP 0008.scaffold00029 74963 1 G A - ReadM SNP 0008.scaffold00029 75114 1 A G - ReadM SNP 0008.scaffold00029 75139 1 T C - Both SNP 0008.scaffold00029 75302 1 C A scaffold16325 Both SNP 0008.scaffold00029 75612 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 75680 1 C G scaffold16325 ScafM INDEL 0008.scaffold00029 75687 2 .. GG scaffold16325 ScafM SNP 0008.scaffold00029 75709 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 75718 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 75737 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 75746 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 75755 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 75778 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 75780 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 75788 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 75815 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 75826 1 G A scaffold16325 Both SNP 0008.scaffold00029 75861 1 T G scaffold16325 Both SNP 0008.scaffold00029 75876 1 T C scaffold16325 Both SNP 0008.scaffold00029 75924 1 T C scaffold16325 Both SNP 0008.scaffold00029 75969 1 G T scaffold16325 Both SNP 0008.scaffold00029 75992 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 76014 1 T C scaffold16325 Both SNP 0008.scaffold00029 76019 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 76065 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 76083 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 76091 1 C A scaffold16325 ScafM INDEL 0008.scaffold00029 76102 6 ...... CACAGA scaffold16325 ScafM SNP 0008.scaffold00029 76113 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 76202 2 TC GA scaffold16325 ScafM SNP 0008.scaffold00029 76207 1 T G scaffold16325 ScafM INDEL 0008.scaffold00029 76211 2 .. TA scaffold16325 ScafM SNP 0008.scaffold00029 76223 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 76262 1 G T scaffold16325 ScafM SNP 0008.scaffold00029 76272 1 C A scaffold16325 ScafM SNP 0008.scaffold00029 76275 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 76293 2 TT CC scaffold16325 ScafM SNP 0008.scaffold00029 76306 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 76316 1 C G scaffold16325 ScafM SNP 0008.scaffold00029 76321 1 C T scaffold16325 ScafM INDEL 0008.scaffold00029 76337 1 G . scaffold16325 ScafM INDEL 0008.scaffold00029 76340 3 TCG ... scaffold16325 ScafM SNP 0008.scaffold00029 76349 1 G C scaffold16325 ScafM INDEL 0008.scaffold00029 76351 3 ... CTG scaffold16325 ScafM SNP 0008.scaffold00029 76355 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 76374 1 G C scaffold16325 ScafM INDEL 0008.scaffold00029 76404 1 A . scaffold16325 ScafM SNP 0008.scaffold00029 76410 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 76413 1 C A scaffold16325 ScafM SNP 0008.scaffold00029 76418 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 76473 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 76475 1 G T scaffold16325 Both SNP 0008.scaffold00029 76483 1 T A scaffold16325 Both SNP 0008.scaffold00029 76544 1 A G scaffold16325 Both SNP 0008.scaffold00029 76586 1 T C scaffold16325 Both SNP 0008.scaffold00029 76593 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 76649 2 AG GA scaffold16325 ScafM INDEL 0008.scaffold00029 76655 2 AT .. scaffold16325 ScafM SNP 0008.scaffold00029 76679 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 76682 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 76685 1 C T scaffold16325 Both SNP 0008.scaffold00029 76738 1 T A scaffold16325 Both SNP 0008.scaffold00029 76784 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 76823 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 76828 1 T A scaffold16325 ScafM INDEL 0008.scaffold00029 76846 2 TT .. scaffold16325 Both SNP 0008.scaffold00029 76861 1 A G scaffold16325 Both SNP 0008.scaffold00029 76937 1 G A scaffold16325 Both SNP 0008.scaffold00029 76984 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 77056 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 77058 1 C A scaffold16325 ScafM SNP 0008.scaffold00029 77060 1 A G scaffold16325 ScafM INDEL 0008.scaffold00029 77121 1 A . scaffold16325 ScafM INDEL 0008.scaffold00029 77125 2 AA .C scaffold16325 ScafM SNP 0008.scaffold00029 77130 4 AACA TCTT scaffold16325 ScafM INDEL 0008.scaffold00029 77181 1 A . scaffold16325 ScafM SNP 0008.scaffold00029 77196 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 77209 1 A C scaffold16325 ScafM INDEL 0008.scaffold00029 77217 1 . G scaffold16325 ScafM SNP 0008.scaffold00029 77240 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 77272 1 G T scaffold16325 ScafM SNP 0008.scaffold00029 77318 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 77368 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 77384 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 77391 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 77442 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 77454 1 G T scaffold16325 ScafM SNP 0008.scaffold00029 77464 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 79027 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 79030 1 C A scaffold16325 ScafM SNP 0008.scaffold00029 79040 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 79048 1 A C scaffold16325 ScafM SNP 0008.scaffold00029 79052 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 79057 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 79073 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 79086 1 G A scaffold16325 ScafM INDEL 0008.scaffold00029 79096 1 . C scaffold16325 ScafM SNP 0008.scaffold00029 79124 1 C T scaffold16325 ScafM SNP 0008.scaffold00029 79126 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 79191 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 79198 1 T A scaffold16325 ScafM SNP 0008.scaffold00029 79203 1 A T scaffold16325 ScafM SNP 0008.scaffold00029 79220 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 79235 1 T G scaffold16325 ScafM SNP 0008.scaffold00029 79240 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 79266 2 CA AG scaffold16325 ScafM SNP 0008.scaffold00029 79282 1 G C scaffold16325 ScafM SNP 0008.scaffold00029 79300 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 79334 2 GA AG scaffold16325 ScafM INDEL 0008.scaffold00029 79339 2 GA .. scaffold16325 ScafM SNP 0008.scaffold00029 79342 1 A G scaffold16325 ScafM SNP 0008.scaffold00029 79354 1 G A scaffold16325 ScafM SNP 0008.scaffold00029 79363 1 A C scaffold16325 ScafM INDEL 0008.scaffold00029 79364 4 .... TTTG scaffold16325 Both SNP 0008.scaffold00029 79474 1 G T scaffold16325 Both INDEL 0008.scaffold00029 79517 1 . T scaffold16325 Both SNP 0008.scaffold00029 79522 1 T A scaffold16325 Both SNP 0008.scaffold00029 79545 1 G A scaffold16325 Both SNP 0008.scaffold00029 79605 1 A G scaffold16325 Both SNP 0008.scaffold00029 79648 1 C T scaffold16325 Both INDEL 0008.scaffold00029 79664 1 . C scaffold16325 Both SNP 0008.scaffold00029 79744 1 G A scaffold16325 Both SNP 0008.scaffold00029 79753 1 C T scaffold16325 ScafM INDEL 0008.scaffold00029 79777 25 GTAAGGGATCAACTTTTTGGGTTTC ......................... scaffold16325 ScafM SNP 0008.scaffold00029 79821 1 T C scaffold16325 ScafM SNP 0008.scaffold00029 80172 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 80182 4 GTGC .... scaffold5504 ScafM SNP 0008.scaffold00029 80212 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 80238 7 ACTGACC ....... scaffold5504 ScafM SNP 0008.scaffold00029 80263 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 80314 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 80323 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 80333 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 80371 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 80373 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 80407 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 80417 6 CCTAGA ...... scaffold5504 ScafM INDEL 0008.scaffold00029 80425 2 CC .. scaffold5504 ScafM INDEL 0008.scaffold00029 80430 3 GGG ... scaffold5504 ScafM INDEL 0008.scaffold00029 80434 1 G . scaffold5504 ScafM SNP 0008.scaffold00029 80456 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 80468 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 80482 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 80492 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 80506 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 80509 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 80565 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80570 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 80572 1 T . scaffold5504 ScafM SNP 0008.scaffold00029 80575 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 80583 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80591 1 C A scaffold5504 ScafM INDEL 0008.scaffold00029 80607 1 T . scaffold5504 ScafM INDEL 0008.scaffold00029 80609 1 G . scaffold5504 ScafM SNP 0008.scaffold00029 80636 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 80640 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 80652 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 80666 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 80672 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80713 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 80716 2 TT AC scaffold5504 ScafM SNP 0008.scaffold00029 80725 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 80739 1 T A scaffold5504 ScafM INDEL 0008.scaffold00029 80742 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 80752 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 80781 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 80801 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 80803 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 80817 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 80870 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80897 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 80899 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80907 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 80911 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 80923 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 80939 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 80991 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 80993 2 AG GA scaffold5504 ScafM SNP 0008.scaffold00029 81001 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 81010 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 81012 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 81037 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81060 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 81075 1 G T scaffold5504 ScafM INDEL 0008.scaffold00029 81080 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 81105 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81116 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 81138 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 81165 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 81173 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 81206 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 81212 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81232 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 81242 1 . T scaffold5504 ScafM INDEL 0008.scaffold00029 81252 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 81260 2 .. TT scaffold5504 ScafM SNP 0008.scaffold00029 81266 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81274 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 81279 3 AAG GGA scaffold5504 ScafM SNP 0008.scaffold00029 81295 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 81308 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81314 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 81316 2 AT GC scaffold5504 ScafM SNP 0008.scaffold00029 81329 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 81337 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81365 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 81378 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 81390 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 81444 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81453 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 81458 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 81468 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 81478 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81482 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 81488 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 81491 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 81493 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 81497 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 81543 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 81552 2 TC CT scaffold5504 ScafM SNP 0008.scaffold00029 81565 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 81571 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 81589 1 C T scaffold5504 ReadM SNP 0008.scaffold00029 81837 1 A C - ReadM SNP 0008.scaffold00029 81917 1 A G - ScafM SNP 0008.scaffold00029 81973 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 82003 2 .T GA scaffold5504 ScafM SNP 0008.scaffold00029 82016 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82018 2 TA CG scaffold5504 ScafM SNP 0008.scaffold00029 82026 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82029 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82041 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82048 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 82074 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 82096 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 82100 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 82106 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 82113 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82119 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82133 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 82143 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82177 2 CC TT scaffold5504 ScafM SNP 0008.scaffold00029 82188 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 82202 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82207 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82217 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 82237 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 82246 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82281 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82287 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82297 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 82302 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82310 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82344 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 82369 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 82374 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 82386 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82394 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 82401 1 G . scaffold5504 ScafM SNP 0008.scaffold00029 82407 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82409 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82418 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 82421 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 82425 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 82432 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 82437 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82447 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82451 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 82651 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82676 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 82681 1 T . scaffold5504 ScafM SNP 0008.scaffold00029 82741 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 82761 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 82773 6 ...... TACTAC scaffold5504 ScafM SNP 0008.scaffold00029 82792 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 82801 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 82824 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82834 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 82843 3 ... GGG scaffold5504 ScafM SNP 0008.scaffold00029 82870 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82925 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 82941 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 82961 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 82965 2 CG TA scaffold5504 ScafM SNP 0008.scaffold00029 82983 1 T A scaffold5504 ScafM INDEL 0008.scaffold00029 82998 6 AAAAAG ...... scaffold5504 ScafM SNP 0008.scaffold00029 83011 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 83037 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 83056 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 83058 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 83066 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 83092 2 TT AG scaffold5504 ScafM INDEL 0008.scaffold00029 83120 3 AAA ... scaffold5504 ScafM SNP 0008.scaffold00029 83150 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 83177 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 83187 2 GG AA scaffold5504 ScafM INDEL 0008.scaffold00029 83195 1 . A scaffold5504 ScafM INDEL 0008.scaffold00029 83196 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 83205 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 83248 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 83271 1 T C scaffold5504 Both SNP 0008.scaffold00029 83287 1 T C scaffold5504 Both SNP 0008.scaffold00029 83307 1 G T scaffold5504 Both SNP 0008.scaffold00029 83323 1 A C scaffold5504 Both INDEL 0008.scaffold00029 83435 1 . T scaffold5504 Both SNP 0008.scaffold00029 83452 1 G A scaffold5504 Both SNP 0008.scaffold00029 83602 1 C A scaffold5504 Both SNP 0008.scaffold00029 83665 1 T A scaffold5504 Both SNP 0008.scaffold00029 83825 1 G T scaffold5504 Both SNP 0008.scaffold00029 83834 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 83963 2 AC GT scaffold5504 Both SNP 0008.scaffold00029 83999 1 T A scaffold5504 Both SNP 0008.scaffold00029 84239 1 G A scaffold5504 Both SNP 0008.scaffold00029 84355 1 G T scaffold5504 Both INDEL 0008.scaffold00029 84357 1 A . scaffold5504 Both SNP 0008.scaffold00029 84404 1 T G scaffold5504 Both SNP 0008.scaffold00029 84427 1 G A scaffold5504 Both SNP 0008.scaffold00029 84465 1 A G scaffold5504 Both SNP 0008.scaffold00029 84542 1 G T scaffold5504 Both SNP 0008.scaffold00029 84582 1 A C scaffold5504 Both INDEL 0008.scaffold00029 84625 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 84663 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 84679 3 CTA TGG scaffold5504 Both SNP 0008.scaffold00029 84768 1 C A scaffold5504 Both SNP 0008.scaffold00029 84868 1 C A scaffold5504 Both SNP 0008.scaffold00029 84920 1 A G scaffold5504 Both SNP 0008.scaffold00029 84928 1 T G scaffold5504 Both SNP 0008.scaffold00029 84950 1 T G scaffold5504 Both SNP 0008.scaffold00029 85002 1 G T scaffold5504 Both SNP 0008.scaffold00029 85011 1 G T scaffold5504 Both SNP 0008.scaffold00029 85074 1 T G scaffold5504 Both SNP 0008.scaffold00029 85108 1 G C scaffold5504 Both SNP 0008.scaffold00029 85132 1 A G scaffold5504 Both SNP 0008.scaffold00029 85140 1 G A scaffold5504 Both SNP 0008.scaffold00029 85200 1 C A scaffold5504 Both SNP 0008.scaffold00029 85269 1 A T scaffold5504 Both SNP 0008.scaffold00029 85495 1 T C scaffold5504 Both SNP 0008.scaffold00029 85561 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 85615 8 AGGCTTTA ........ scaffold5504 Both SNP 0008.scaffold00029 85641 1 G A scaffold5504 Both SNP 0008.scaffold00029 85680 1 G C scaffold5504 Both SNP 0008.scaffold00029 85743 1 C T scaffold5504 Both SNP 0008.scaffold00029 85767 1 A T scaffold5504 Both SNP 0008.scaffold00029 86289 1 A T scaffold5504 Both SNP 0008.scaffold00029 86301 1 T G scaffold5504 Both SNP 0008.scaffold00029 86318 1 C G scaffold5504 Both SNP 0008.scaffold00029 86340 1 A G scaffold5504 Both SNP 0008.scaffold00029 86357 1 T C scaffold5504 Both SNP 0008.scaffold00029 86392 1 T C scaffold5504 Both SNP 0008.scaffold00029 86446 2 GG AA scaffold5504 Both SNP 0008.scaffold00029 86451 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 86512 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 86518 1 T C scaffold5504 Both SNP 0008.scaffold00029 86544 1 T C scaffold5504 Both SNP 0008.scaffold00029 86549 1 C A scaffold5504 Both SNP 0008.scaffold00029 86615 1 T C scaffold5504 Both SNP 0008.scaffold00029 86698 1 G T scaffold5504 Both INDEL 0008.scaffold00029 86714 1 . A scaffold5504 ScafM INDEL 0008.scaffold00029 86738 3 ACA ... scaffold5504 Both INDEL 0008.scaffold00029 86766 1 A . scaffold5504 Both SNP 0008.scaffold00029 86821 1 C T scaffold5504 Both SNP 0008.scaffold00029 86844 1 C T scaffold5504 Both SNP 0008.scaffold00029 86856 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 86875 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 86908 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 86912 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 86926 2 AC GT scaffold5504 Both SNP 0008.scaffold00029 87013 1 A G scaffold5504 Both SNP 0008.scaffold00029 87117 1 T G scaffold5504 ReadM INDEL 0008.scaffold00029 87226 1 A . - ScafM INDEL 0008.scaffold00029 87226 2 AA .C scaffold5504 ScafM SNP 0008.scaffold00029 87254 1 C A scaffold5504 ScafM INDEL 0008.scaffold00029 87256 4 CCCC ...A scaffold5504 ScafM SNP 0008.scaffold00029 87261 2 GG AA scaffold5504 ScafM SNP 0008.scaffold00029 87268 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 87278 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 87286 1 A . scaffold5504 Both SNP 0008.scaffold00029 87369 1 A G scaffold5504 Both INDEL 0008.scaffold00029 87425 2 .. TG scaffold5504 Both SNP 0008.scaffold00029 87610 1 G A scaffold5504 Both SNP 0008.scaffold00029 87870 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 87903 8 ........ AGTCATAG scaffold5504 ScafM SNP 0008.scaffold00029 87913 1 T A scaffold5504 ScafM INDEL 0008.scaffold00029 87924 2 .A GT scaffold5504 ScafM SNP 0008.scaffold00029 87928 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 87937 7 GTACTAT ....... scaffold5504 ScafM SNP 0008.scaffold00029 87970 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 87981 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 87983 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 87995 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 87996 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 88006 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 88025 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88028 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88044 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88052 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 88085 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88112 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88123 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88127 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88131 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88134 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88140 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 88144 2 AG GA scaffold5504 ScafM SNP 0008.scaffold00029 88179 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 88198 8 ........ TTTACAAG scaffold5504 ScafM SNP 0008.scaffold00029 88215 2 AG GA scaffold5504 Both SNP 0008.scaffold00029 88248 1 A G scaffold5504 Both SNP 0008.scaffold00029 88256 1 C T scaffold5504 Both SNP 0008.scaffold00029 88320 1 A C scaffold5504 Both INDEL 0008.scaffold00029 88345 1 G . scaffold5504 ScafM SNP 0008.scaffold00029 88359 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88377 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88379 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88405 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88436 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88439 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88459 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 88461 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 88466 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88517 1 G C scaffold5504 ScafM INDEL 0008.scaffold00029 88539 4 AATG .... scaffold5504 ScafM SNP 0008.scaffold00029 88549 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 88564 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 88582 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 88596 2 GC AA scaffold5504 ScafM SNP 0008.scaffold00029 88621 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 88629 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 88694 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 88698 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 88708 1 G A scaffold5504 Both SNP 0008.scaffold00029 88789 1 G A scaffold5504 Both SNP 0008.scaffold00029 88801 1 T C scaffold5504 Both SNP 0008.scaffold00029 88841 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 88866 1 A G scaffold5504 ReadM SNP 0008.scaffold00029 89326 1 T C - ReadM SNP 0008.scaffold00029 89364 1 C T - ReadM SNP 0008.scaffold00029 89369 1 G A - ReadM SNP 0008.scaffold00029 89579 1 C T - ReadM SNP 0008.scaffold00029 89587 1 A G - ScafM SNP 0008.scaffold00029 89662 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 89665 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 89668 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 89670 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 89677 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 89691 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 89703 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 89709 2 AA .T scaffold5504 ScafM SNP 0008.scaffold00029 89721 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 89745 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 89757 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 89761 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 89821 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 89849 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 89865 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 89881 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 89887 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 89889 1 T C scaffold5504 ReadM SNP 0008.scaffold00029 90070 1 T C - ReadM INDEL 0008.scaffold00029 90077 1 G . - ScafM SNP 0008.scaffold00029 90349 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 90356 4 CCCT TTGA scaffold5504 ScafM SNP 0008.scaffold00029 90399 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 90412 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 90432 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 90435 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 90447 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 90484 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 90513 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 90522 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 111867 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 111873 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 111886 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 111905 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 111924 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 111938 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 111941 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 111955 2 AC TT scaffold5504 ScafM SNP 0008.scaffold00029 111981 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112015 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 112042 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112044 2 CT TC scaffold5504 ScafM SNP 0008.scaffold00029 112057 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 112059 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112086 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 112097 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112099 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 112125 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 112148 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 112150 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 112187 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 112205 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112211 2 AT CC scaffold5504 ScafM SNP 0008.scaffold00029 112219 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112221 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 112250 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 112533 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 112536 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 112539 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112583 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112588 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 112624 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112663 2 TA AT scaffold5504 Both SNP 0008.scaffold00029 112702 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 112722 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 112727 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 112752 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112761 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 112778 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112790 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 112792 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 112826 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 112829 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 112858 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 112877 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112884 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 112899 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 112903 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 112914 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 112924 2 GC AA scaffold5504 ScafM SNP 0008.scaffold00029 112977 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 112984 2 TA CT scaffold5504 ScafM SNP 0008.scaffold00029 112989 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 112996 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113006 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 113013 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113016 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 113023 1 G A scaffold5504 ReadM SNP 0008.scaffold00029 113165 1 A G - Both SNP 0008.scaffold00029 113188 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 113242 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 113263 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 113266 3 AAC ... scaffold5504 ScafM SNP 0008.scaffold00029 113271 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 113273 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 113277 1 C . scaffold5504 ScafM INDEL 0008.scaffold00029 113279 1 C . scaffold5504 ScafM SNP 0008.scaffold00029 113282 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 113285 5 TTTTT ..... scaffold5504 ScafM SNP 0008.scaffold00029 113292 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 113296 4 TTCA ...G scaffold5504 ScafM INDEL 0008.scaffold00029 113304 4 ACAA .... scaffold5504 ScafM SNP 0008.scaffold00029 113310 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 113313 2 CA .. scaffold5504 ScafM SNP 0008.scaffold00029 113355 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 113381 2 .. TT scaffold5504 ScafM SNP 0008.scaffold00029 113388 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 113422 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 113439 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 113456 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113465 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113499 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 113529 2 GA TG scaffold5504 ScafM SNP 0008.scaffold00029 113536 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 113548 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 113558 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 113563 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 113579 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 113588 1 . T scaffold5504 Both INDEL 0008.scaffold00029 113685 2 .. AG scaffold5504 Both SNP 0008.scaffold00029 113715 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113777 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113792 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 113799 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 113803 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 113858 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 113861 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 113867 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 113876 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113879 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 113976 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 113983 1 G . scaffold5504 ScafM SNP 0008.scaffold00029 114000 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 114031 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 114034 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 114081 3 TTT ... scaffold5504 ScafM INDEL 0008.scaffold00029 114107 2 TT .. scaffold5504 ScafM SNP 0008.scaffold00029 114117 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 114146 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 114172 3 ATA ... scaffold5504 ScafM INDEL 0008.scaffold00029 114176 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 114208 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 114210 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 114227 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 114237 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 114463 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 114479 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 114493 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 114507 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 114510 1 T . scaffold5504 ScafM SNP 0008.scaffold00029 114545 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 114553 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 114574 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 114638 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 114641 4 GATG .... scaffold5504 ScafM SNP 0008.scaffold00029 114657 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 114693 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 114695 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 114762 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 114767 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 114793 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 114802 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 116155 3 ..C AAA scaffold3745 ScafM SNP 0008.scaffold00029 116163 1 G C scaffold3745 ScafM SNP 0008.scaffold00029 116176 1 C A scaffold3745 ScafM SNP 0008.scaffold00029 116186 1 T C scaffold3745 ScafM INDEL 0008.scaffold00029 116191 3 TTT ... scaffold3745 ScafM SNP 0008.scaffold00029 116203 2 AC GT scaffold3745 ScafM SNP 0008.scaffold00029 116235 1 T G scaffold3745 ScafM SNP 0008.scaffold00029 116240 1 A C scaffold3745 ScafM SNP 0008.scaffold00029 116252 1 G A scaffold3745 ScafM SNP 0008.scaffold00029 116334 1 C G scaffold3745 ScafM SNP 0008.scaffold00029 116342 1 A T scaffold3745 ScafM SNP 0008.scaffold00029 116344 1 G A scaffold3745 ScafM SNP 0008.scaffold00029 116352 1 T A scaffold3745 ScafM INDEL 0008.scaffold00029 122879 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 122882 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 122887 4 AATT .... scaffold5504 ScafM SNP 0008.scaffold00029 122904 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 122928 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 122947 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 122990 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 123009 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 123013 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 123042 2 .. AC scaffold5504 ScafM SNP 0008.scaffold00029 123164 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 123178 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 123191 2 TA AC scaffold5504 ScafM SNP 0008.scaffold00029 123222 1 T A scaffold5504 ScafM INDEL 0008.scaffold00029 123246 1 . T scaffold5504 ScafM INDEL 0008.scaffold00029 123266 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 123274 1 T A scaffold5504 Both SNP 0008.scaffold00029 123303 1 A T scaffold5504 Both SNP 0008.scaffold00029 123335 1 G C scaffold5504 Both SNP 0008.scaffold00029 123374 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 123394 2 AA .. scaffold5504 ScafM INDEL 0008.scaffold00029 123400 9 CCGCATTTT ......... scaffold5504 ScafM INDEL 0008.scaffold00029 123410 3 AAG ... scaffold5504 ScafM INDEL 0008.scaffold00029 123415 5 ATTAA ..... scaffold5504 ScafM INDEL 0008.scaffold00029 123422 1 T . scaffold5504 ScafM INDEL 0008.scaffold00029 123425 1 G . scaffold5504 ScafM INDEL 0008.scaffold00029 123427 2 CT .. scaffold5504 ScafM INDEL 0008.scaffold00029 123430 6 AGAAAA ...... scaffold5504 ScafM SNP 0008.scaffold00029 123443 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 123476 2 .. TG scaffold5504 ScafM INDEL 0008.scaffold00029 123478 1 . G scaffold5504 ScafM SNP 0008.scaffold00029 123499 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 123506 1 G A scaffold5504 Both SNP 0008.scaffold00029 123523 1 G A scaffold5504 Both SNP 0008.scaffold00029 123535 1 T A scaffold5504 Both SNP 0008.scaffold00029 123664 1 T C scaffold5504 Both SNP 0008.scaffold00029 123802 1 T G scaffold5504 Both SNP 0008.scaffold00029 124042 1 T C scaffold5504 Both SNP 0008.scaffold00029 124553 1 T A scaffold5504 Both SNP 0008.scaffold00029 124663 1 A T scaffold5504 Both SNP 0008.scaffold00029 124691 1 A T scaffold5504 Both SNP 0008.scaffold00029 124735 1 A T scaffold5504 Both SNP 0008.scaffold00029 125058 1 G A scaffold5504 Both SNP 0008.scaffold00029 125087 1 A T scaffold5504 Both SNP 0008.scaffold00029 125128 1 C T scaffold5504 ReadM SNP 0008.scaffold00029 125512 1 C T - ScafM INDEL 0008.scaffold00029 125731 7 ....... TCTGTGG scaffold5504 ScafM INDEL 0008.scaffold00029 125758 32 ................................ TATCTTAAGGGTGTGGGTTTTAAAAAGGAGTA scaffold5504 ReadM INDEL 0008.scaffold00029 125882 1 T . - ScafM INDEL 0008.scaffold00029 125882 2 TA .G scaffold5504 Both INDEL 0008.scaffold00029 126092 1 . T scaffold5504 ScafM INDEL 0008.scaffold00029 126127 1 G . scaffold5504 Both SNP 0008.scaffold00029 126439 1 C T scaffold5504 Both SNP 0008.scaffold00029 126441 1 A G scaffold5504 ReadM SNP 0008.scaffold00029 126640 1 C A - ReadM SNP 0008.scaffold00029 126987 1 A C - ReadM SNP 0008.scaffold00029 127045 1 G A - Both SNP 0008.scaffold00029 127093 1 T C scaffold5504 Both SNP 0008.scaffold00029 127196 1 C A scaffold5504 Both SNP 0008.scaffold00029 127733 1 A G scaffold5504 Both SNP 0008.scaffold00029 127963 1 C T scaffold5504 Both SNP 0008.scaffold00029 128418 1 C G scaffold5504 Both SNP 0008.scaffold00029 128812 1 T A scaffold5504 Both SNP 0008.scaffold00029 129078 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 129217 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 129223 3 AGT ... scaffold5504 ScafM INDEL 0008.scaffold00029 129326 27 ........................... TATCTGGGCATTAATGGATGGTTGGTG scaffold5504 Both SNP 0008.scaffold00029 129392 1 T C scaffold5504 Both SNP 0008.scaffold00029 129835 1 G T scaffold5504 Both SNP 0008.scaffold00029 129872 1 G T scaffold5504 Both SNP 0008.scaffold00029 129881 1 A C scaffold5504 Both SNP 0008.scaffold00029 129890 1 T G scaffold5504 Both SNP 0008.scaffold00029 129956 1 T C scaffold5504 Both SNP 0008.scaffold00029 130067 1 G T scaffold5504 Both SNP 0008.scaffold00029 130352 1 A T scaffold5504 Both SNP 0008.scaffold00029 130518 1 A C scaffold5504 Both SNP 0008.scaffold00029 130605 1 A G scaffold5504 Both SNP 0008.scaffold00029 130634 1 A G scaffold5504 Both SNP 0008.scaffold00029 130732 1 A G scaffold5504 Both SNP 0008.scaffold00029 131219 1 A G scaffold5504 Both SNP 0008.scaffold00029 131306 1 T C scaffold5504 Both SNP 0008.scaffold00029 131634 1 T C scaffold5504 Both SNP 0008.scaffold00029 131676 1 T G scaffold5504 Both SNP 0008.scaffold00029 131696 1 A G scaffold5504 Both SNP 0008.scaffold00029 131894 1 G A scaffold5504 Both SNP 0008.scaffold00029 131907 1 G T scaffold5504 ScafM INDEL 0008.scaffold00029 131951 15 ............... ATTATTATTATTAGG scaffold5504 ScafM INDEL 0008.scaffold00029 132001 3 TCT ... scaffold5504 ScafM SNP 0008.scaffold00029 132005 1 C A scaffold5504 Both SNP 0008.scaffold00029 132066 1 T C scaffold5504 Both SNP 0008.scaffold00029 132089 1 A G scaffold5504 Both INDEL 0008.scaffold00029 132104 1 T . scaffold5504 ScafM INDEL 0008.scaffold00029 132156 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 132159 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 132171 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 132175 2 AG .. scaffold5504 Both SNP 0008.scaffold00029 132243 1 T A scaffold5504 Both SNP 0008.scaffold00029 132408 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 132460 1 C T scaffold5504 Both SNP 0008.scaffold00029 132591 1 C T scaffold5504 Both SNP 0008.scaffold00029 132674 1 T C scaffold5504 Both SNP 0008.scaffold00029 133247 1 G A scaffold5504 Both SNP 0008.scaffold00029 133296 1 G C scaffold5504 Both INDEL 0008.scaffold00029 133332 1 . T scaffold5504 ReadM SNP 0008.scaffold00029 133506 1 G T - ReadM SNP 0008.scaffold00029 133511 1 A T - Both SNP 0008.scaffold00029 133719 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 133899 2 GG AA scaffold5504 Both SNP 0008.scaffold00029 133984 1 T G scaffold5504 Both SNP 0008.scaffold00029 134003 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 134041 9 ......... TTGAGGTGG scaffold5504 Both SNP 0008.scaffold00029 134090 1 A G scaffold5504 Both SNP 0008.scaffold00029 134102 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 134191 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 134227 2 CC TT scaffold5504 Both SNP 0008.scaffold00029 134496 1 T C scaffold5504 Both SNP 0008.scaffold00029 134794 1 G T scaffold5504 Both SNP 0008.scaffold00029 135039 1 G A scaffold5504 Both SNP 0008.scaffold00029 135423 1 A G scaffold5504 Both SNP 0008.scaffold00029 135931 1 A T scaffold5504 Both SNP 0008.scaffold00029 136020 1 C G scaffold5504 Both INDEL 0008.scaffold00029 136722 1 G . scaffold5504 Both SNP 0008.scaffold00029 136756 1 T C scaffold5504 Both SNP 0008.scaffold00029 136789 1 G A scaffold5504 Both SNP 0008.scaffold00029 136836 1 C T scaffold5504 Both SNP 0008.scaffold00029 136902 1 A G scaffold5504 Both INDEL 0008.scaffold00029 136977 1 . C scaffold5504 Both SNP 0008.scaffold00029 137145 1 C T scaffold5504 Both SNP 0008.scaffold00029 137270 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 137334 8 ........ AGTCTGAG scaffold5504 ScafM SNP 0008.scaffold00029 137353 1 G A scaffold5504 Both SNP 0008.scaffold00029 137388 1 C G scaffold5504 Both SNP 0008.scaffold00029 137643 1 C T scaffold5504 Both SNP 0008.scaffold00029 137701 1 T A scaffold5504 Both SNP 0008.scaffold00029 138078 1 C T scaffold5504 Both INDEL 0008.scaffold00029 138149 3 ... AAG scaffold5504 ReadM INDEL 0008.scaffold00029 138152 3 ... AAT - ReadM INDEL 0008.scaffold00029 138153 3 ... AGT - ScafM SNP 0008.scaffold00029 138873 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 138877 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 139336 1 A G scaffold5504 Both SNP 0008.scaffold00029 139410 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 139501 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 139502 11 ........... GGGGGGGGGGG scaffold5504 ScafM SNP 0008.scaffold00029 139504 1 T G scaffold5504 Both SNP 0008.scaffold00029 139853 1 C T scaffold5504 Both SNP 0008.scaffold00029 140184 1 G C scaffold5504 Both SNP 0008.scaffold00029 140305 1 T A scaffold5504 Both SNP 0008.scaffold00029 140570 1 A G scaffold5504 Both SNP 0008.scaffold00029 140666 1 G A scaffold5504 Both INDEL 0008.scaffold00029 140670 1 . A scaffold5504 Both SNP 0008.scaffold00029 140762 1 C T scaffold5504 Both SNP 0008.scaffold00029 140913 1 A G scaffold5504 ReadM SNP 0008.scaffold00029 141010 1 T C - ReadM SNP 0008.scaffold00029 141071 1 T C - Both SNP 0008.scaffold00029 141205 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 141260 20 .................... TTTCTTTTTCTTTTCTTTTT scaffold5504 ScafM INDEL 0008.scaffold00029 141341 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 141344 2 AC CT scaffold5504 Both INDEL 0008.scaffold00029 141377 1 . A scaffold5504 ScafM SNP 0008.scaffold00029 141384 1 A T scaffold5504 ReadM SNP 0008.scaffold00029 141494 1 C T - Both SNP 0008.scaffold00029 141586 1 T C scaffold5504 ReadM SNP 0008.scaffold00029 141920 1 C T - ReadM SNP 0008.scaffold00029 141940 1 G C - Both SNP 0008.scaffold00029 142063 1 C T scaffold5504 Both SNP 0008.scaffold00029 142392 1 A C scaffold5504 Both SNP 0008.scaffold00029 142721 1 G C scaffold5504 Both SNP 0008.scaffold00029 142805 1 T C scaffold5504 Both SNP 0008.scaffold00029 142840 1 T C scaffold5504 Both SNP 0008.scaffold00029 142911 1 A G scaffold5504 ReadM SNP 0008.scaffold00029 143233 1 A G - ReadM SNP 0008.scaffold00029 143342 1 G T - ReadM SNP 0008.scaffold00029 143873 1 G A - ReadM SNP 0008.scaffold00029 143945 1 A G - ReadM SNP 0008.scaffold00029 143983 1 T C - ReadM SNP 0008.scaffold00029 143986 1 C G - Both SNP 0008.scaffold00029 144292 1 A G scaffold5504 Both INDEL 0008.scaffold00029 144380 2 CT .. scaffold5504 Both SNP 0008.scaffold00029 144563 1 C T scaffold5504 Both INDEL 0008.scaffold00029 144642 1 T . scaffold5504 Both INDEL 0008.scaffold00029 145589 1 . A scaffold5504 Both SNP 0008.scaffold00029 145610 1 C T scaffold5504 Both SNP 0008.scaffold00029 145723 1 T C scaffold5504 Both SNP 0008.scaffold00029 145823 1 G A scaffold5504 Both INDEL 0008.scaffold00029 145967 1 . C scaffold5504 ReadM SNP 0008.scaffold00029 146141 1 G C - Both SNP 0008.scaffold00029 146704 1 A G scaffold5504 Both SNP 0008.scaffold00029 146870 1 C T scaffold5504 Both SNP 0008.scaffold00029 146933 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 147095 1 . T scaffold5504 Both SNP 0008.scaffold00029 147232 1 A T scaffold5504 Both SNP 0008.scaffold00029 147265 1 G T scaffold5504 Both SNP 0008.scaffold00029 147623 1 C A scaffold5504 ReadM SNP 0008.scaffold00029 148098 1 A G - ReadM INDEL 0008.scaffold00029 148132 1 . C - Both SNP 0008.scaffold00029 148318 1 A C scaffold5504 Both SNP 0008.scaffold00029 148484 1 T C scaffold5504 Both SNP 0008.scaffold00029 148626 1 G A scaffold5504 Both SNP 0008.scaffold00029 148659 1 A T scaffold5504 Both SNP 0008.scaffold00029 148756 1 C T scaffold5504 Both SNP 0008.scaffold00029 148888 1 A C scaffold5504 Both SNP 0008.scaffold00029 149103 1 A T scaffold5504 Both SNP 0008.scaffold00029 149134 1 G A scaffold5504 Both SNP 0008.scaffold00029 149490 1 G T scaffold5504 Both SNP 0008.scaffold00029 149527 1 A G scaffold5504 Both SNP 0008.scaffold00029 149815 1 G T scaffold5504 Both SNP 0008.scaffold00029 149954 1 T C scaffold5504 Both SNP 0008.scaffold00029 150089 1 C T scaffold5504 Both SNP 0008.scaffold00029 150203 1 T C scaffold5504 Both SNP 0008.scaffold00029 150358 1 G A scaffold5504 ReadM SNP 0008.scaffold00029 150438 1 C T - Both SNP 0008.scaffold00029 150606 1 A C scaffold5504 Both SNP 0008.scaffold00029 150726 1 C G scaffold5504 Both SNP 0008.scaffold00029 150992 1 A T scaffold5504 Both SNP 0008.scaffold00029 151017 1 C T scaffold5504 ReadM SNP 0008.scaffold00029 151230 1 T C - ReadM SNP 0008.scaffold00029 151317 1 A G - ReadM INDEL 0008.scaffold00029 151355 2 AG .. - ScafM INDEL 0008.scaffold00029 152281 5 ..... ACTTT scaffold5504 Both SNP 0008.scaffold00029 152443 1 C A scaffold5504 ReadM SNP 0008.scaffold00029 152471 1 G A - ReadM SNP 0008.scaffold00029 152579 1 T C - ReadM SNP 0008.scaffold00029 152733 1 T C - ReadM SNP 0008.scaffold00029 152792 1 T C - ReadM SNP 0008.scaffold00029 152834 1 G A - ScafM SNP 0008.scaffold00029 152980 1 C T scaffold5504 Both SNP 0008.scaffold00029 153075 1 C T scaffold5504 Both SNP 0008.scaffold00029 153106 1 T C scaffold5504 ReadM SNP 0008.scaffold00029 153137 1 T C - ReadM SNP 0008.scaffold00029 153145 1 C T - ReadM SNP 0008.scaffold00029 153266 1 T C - ReadM SNP 0008.scaffold00029 153919 1 G C - ReadM SNP 0008.scaffold00029 153941 1 T G - ScafM SNP 0008.scaffold00029 154223 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 154269 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 155373 1 A G scaffold5504 Both SNP 0008.scaffold00029 155599 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 155617 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 155619 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 155756 2 .. TA scaffold5504 Both SNP 0008.scaffold00029 155782 1 G A scaffold5504 Both INDEL 0008.scaffold00029 155843 1 A . scaffold5504 ReadM SNP 0008.scaffold00029 155934 1 A G - Both SNP 0008.scaffold00029 156253 1 T C scaffold5504 Both SNP 0008.scaffold00029 156317 1 T C scaffold5504 Both SNP 0008.scaffold00029 156454 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 156551 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 156586 1 T G scaffold5504 Both SNP 0008.scaffold00029 156621 1 C T scaffold5504 Both SNP 0008.scaffold00029 156813 1 A G scaffold5504 Both SNP 0008.scaffold00029 156854 1 A G scaffold5504 Both SNP 0008.scaffold00029 157086 1 A G scaffold5504 Both SNP 0008.scaffold00029 157125 2 AT CC scaffold5504 Both SNP 0008.scaffold00029 157227 1 T C scaffold5504 Both SNP 0008.scaffold00029 157461 1 C G scaffold5504 Both SNP 0008.scaffold00029 157715 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 157737 6 CATCTT ...... scaffold5504 Both SNP 0008.scaffold00029 157790 1 C T scaffold5504 Both SNP 0008.scaffold00029 157878 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 157912 1 T C scaffold5504 Both SNP 0008.scaffold00029 157991 1 G T scaffold5504 Both SNP 0008.scaffold00029 158155 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 158250 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 158254 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 158258 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 158260 1 T C scaffold5504 Both SNP 0008.scaffold00029 158306 1 A G scaffold5504 Both SNP 0008.scaffold00029 158403 1 T A scaffold5504 Both INDEL 0008.scaffold00029 158677 1 T . scaffold5504 ReadM SNP 0008.scaffold00029 158836 2 GC AT - ReadM SNP 0008.scaffold00029 158859 1 T C - ReadM SNP 0008.scaffold00029 158931 1 A G - ReadM SNP 0008.scaffold00029 158976 1 G T - ScafM SNP 0008.scaffold00029 159297 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 159315 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 159342 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 159347 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 159373 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 160632 1 T G scaffold1252 ScafM SNP 0008.scaffold00029 160640 1 C T scaffold1252 ScafM SNP 0008.scaffold00029 160661 1 G T scaffold1252 ScafM SNP 0008.scaffold00029 160750 1 C T scaffold1252 ScafM SNP 0008.scaffold00029 168830 1 C G scaffold5504 ReadM SNP 0008.scaffold00029 169141 1 A G - ReadM SNP 0008.scaffold00029 169248 1 C T - ReadM SNP 0008.scaffold00029 169271 1 C T - ReadM SNP 0008.scaffold00029 169599 1 G A - ReadM SNP 0008.scaffold00029 169621 1 G A - ReadM SNP 0008.scaffold00029 169631 1 T G - ReadM SNP 0008.scaffold00029 169643 1 C A - ReadM SNP 0008.scaffold00029 169712 1 C T - Both SNP 0008.scaffold00029 170090 1 T C scaffold5504 Both SNP 0008.scaffold00029 170098 1 A C scaffold5504 Both SNP 0008.scaffold00029 170215 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 170228 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 170237 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 170242 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 170244 1 A G scaffold5504 Both SNP 0008.scaffold00029 170305 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 170478 1 T A scaffold5504 ReadM SNP 0008.scaffold00029 170697 1 T C - ReadM SNP 0008.scaffold00029 170816 1 T G - ReadM SNP 0008.scaffold00029 170820 1 C G - ReadM SNP 0008.scaffold00029 171154 1 G A - ReadM SNP 0008.scaffold00029 171307 1 A G - ReadM SNP 0008.scaffold00029 171376 1 G T - ReadM SNP 0008.scaffold00029 171414 1 G A - ReadM SNP 0008.scaffold00029 171434 1 C A - ReadM SNP 0008.scaffold00029 171488 1 T C - ReadM SNP 0008.scaffold00029 171568 1 G T - ReadM SNP 0008.scaffold00029 171774 1 C T - ReadM SNP 0008.scaffold00029 171802 1 C T - Both SNP 0008.scaffold00029 171890 1 A T scaffold5504 Both SNP 0008.scaffold00029 171931 1 T G scaffold5504 ReadM SNP 0008.scaffold00029 172408 1 T C - ReadM SNP 0008.scaffold00029 172439 1 T A - ReadM SNP 0008.scaffold00029 172719 1 T C - ReadM SNP 0008.scaffold00029 172739 1 C A - ReadM SNP 0008.scaffold00029 172839 1 G C - ReadM SNP 0008.scaffold00029 172991 1 T G - ReadM SNP 0008.scaffold00029 173091 1 C T - ReadM SNP 0008.scaffold00029 173100 1 C T - ReadM SNP 0008.scaffold00029 173239 1 G A - ReadM SNP 0008.scaffold00029 173312 1 C T - ReadM SNP 0008.scaffold00029 173358 1 G A - ReadM SNP 0008.scaffold00029 173384 1 G A - ReadM INDEL 0008.scaffold00029 173405 2 TA .. - ReadM SNP 0008.scaffold00029 173580 1 C T - ReadM SNP 0008.scaffold00029 173611 1 T C - ReadM SNP 0008.scaffold00029 173654 1 A G - ReadM SNP 0008.scaffold00029 173815 1 T G - ReadM SNP 0008.scaffold00029 173820 1 A G - ReadM SNP 0008.scaffold00029 173851 1 G A - ReadM SNP 0008.scaffold00029 174251 1 C T - ReadM SNP 0008.scaffold00029 174269 1 T C - ReadM SNP 0008.scaffold00029 174659 1 C G - ReadM SNP 0008.scaffold00029 174663 1 C G - ReadM SNP 0008.scaffold00029 174827 1 A T - ReadM SNP 0008.scaffold00029 175560 1 T C - ReadM SNP 0008.scaffold00029 175723 1 G A - ReadM SNP 0008.scaffold00029 175879 1 G A - ReadM SNP 0008.scaffold00029 175890 1 A G - ReadM SNP 0008.scaffold00029 175942 1 A T - ReadM SNP 0008.scaffold00029 175982 1 A G - ReadM SNP 0008.scaffold00029 176038 1 T C - ReadM SNP 0008.scaffold00029 176060 1 C T - ReadM SNP 0008.scaffold00029 176261 1 G A - ReadM SNP 0008.scaffold00029 176313 1 G A - ReadM SNP 0008.scaffold00029 176529 1 T A - ReadM SNP 0008.scaffold00029 176578 1 G A - ReadM SNP 0008.scaffold00029 176636 1 C T - ReadM SNP 0008.scaffold00029 176655 1 A G - ReadM SNP 0008.scaffold00029 176802 1 G A - ReadM SNP 0008.scaffold00029 176815 1 T C - ReadM SNP 0008.scaffold00029 176823 1 A C - ReadM SNP 0008.scaffold00029 176849 1 A G - ReadM SNP 0008.scaffold00029 176853 1 T G - ReadM SNP 0008.scaffold00029 176936 2 AG CT - ReadM SNP 0008.scaffold00029 177001 1 T C - ReadM SNP 0008.scaffold00029 177154 1 C T - ReadM SNP 0008.scaffold00029 177200 1 G A - ScafM SNP 0008.scaffold00029 177289 1 T C scaffold5504 Both SNP 0008.scaffold00029 177323 1 C T scaffold5504 Both SNP 0008.scaffold00029 177820 1 A C scaffold5504 Both SNP 0008.scaffold00029 177869 1 T C scaffold5504 Both INDEL 0008.scaffold00029 177967 1 . C scaffold5504 Both SNP 0008.scaffold00029 177978 1 G A scaffold5504 Both SNP 0008.scaffold00029 178002 1 G A scaffold5504 Both SNP 0008.scaffold00029 178093 1 A T scaffold5504 Both SNP 0008.scaffold00029 178205 1 A G scaffold5504 Both SNP 0008.scaffold00029 178316 1 C G scaffold5504 Both SNP 0008.scaffold00029 178332 1 G A scaffold5504 Both INDEL 0008.scaffold00029 178389 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 178513 2 GT AA scaffold5504 ScafM SNP 0008.scaffold00029 178541 2 GT AG scaffold5504 ScafM INDEL 0008.scaffold00029 178630 8 ........ CAATTCTA scaffold5504 Both SNP 0008.scaffold00029 178730 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 178887 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 178899 11 TTTGTCTTTTC ........... scaffold5504 ScafM INDEL 0008.scaffold00029 178946 7 TGATTGT ....... scaffold5504 Both INDEL 0008.scaffold00029 178995 2 TT .. scaffold5504 Both SNP 0008.scaffold00029 179121 1 T C scaffold5504 Both SNP 0008.scaffold00029 179124 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 179161 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 179175 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 179198 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 179217 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 179242 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 179306 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 179317 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 179322 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 179354 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 179369 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 179372 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 179381 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 179398 3 ATT GAA scaffold5504 ScafM INDEL 0008.scaffold00029 179443 2 AA .T scaffold5504 ScafM SNP 0008.scaffold00029 179451 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 179455 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 179468 2 .. CA scaffold5504 ScafM INDEL 0008.scaffold00029 179537 1 C . scaffold5504 ScafM SNP 0008.scaffold00029 179549 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 179566 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 179583 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 179610 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 179642 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 179644 1 T C scaffold5504 Both SNP 0008.scaffold00029 179661 1 C A scaffold5504 Both SNP 0008.scaffold00029 179746 1 C A scaffold5504 Both SNP 0008.scaffold00029 179844 1 T A scaffold5504 Both SNP 0008.scaffold00029 179850 1 T A scaffold5504 Both INDEL 0008.scaffold00029 179863 1 T . scaffold5504 Both INDEL 0008.scaffold00029 180037 1 . G scaffold5504 Both SNP 0008.scaffold00029 180148 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 180256 2 .. TC scaffold5504 Both SNP 0008.scaffold00029 180286 1 T C scaffold5504 Both SNP 0008.scaffold00029 180331 1 G C scaffold5504 Both INDEL 0008.scaffold00029 180396 2 TA .. scaffold5504 Both SNP 0008.scaffold00029 180478 1 G C scaffold5504 Both SNP 0008.scaffold00029 180487 1 T C scaffold5504 Both SNP 0008.scaffold00029 180536 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 180576 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 180582 2 TC .A scaffold5504 ScafM INDEL 0008.scaffold00029 180593 1 A . scaffold5504 ScafM SNP 0008.scaffold00029 180615 1 G C scaffold5504 ScafM SNP 0008.scaffold00029 180621 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 180626 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 180632 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 180639 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 180648 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 180659 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 180660 4 .... CCTC scaffold5504 ScafM INDEL 0008.scaffold00029 180661 1 . A scaffold5504 ScafM INDEL 0008.scaffold00029 180662 3 ... TTT scaffold5504 ScafM INDEL 0008.scaffold00029 180665 12 ............ ATATTATGGGAT scaffold5504 Both SNP 0008.scaffold00029 180712 1 G T scaffold5504 Both SNP 0008.scaffold00029 180754 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 180785 1 T A scaffold5504 ScafM INDEL 0008.scaffold00029 180798 10 GTGAAAATTG .......... scaffold5504 ScafM SNP 0008.scaffold00029 180814 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 180832 1 G C scaffold5504 Both SNP 0008.scaffold00029 180850 1 G A scaffold5504 Both SNP 0008.scaffold00029 180911 1 A T scaffold5504 Both SNP 0008.scaffold00029 180925 1 G A scaffold5504 Both SNP 0008.scaffold00029 180955 1 A T scaffold5504 Both SNP 0008.scaffold00029 180980 1 T C scaffold5504 Both SNP 0008.scaffold00029 181189 1 C T scaffold5504 Both SNP 0008.scaffold00029 181195 1 G A scaffold5504 Both SNP 0008.scaffold00029 181294 1 T A scaffold5504 Both SNP 0008.scaffold00029 181317 1 T C scaffold5504 Both SNP 0008.scaffold00029 181561 1 A G scaffold5504 Both SNP 0008.scaffold00029 181568 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 181607 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 181626 1 . T scaffold5504 ScafM SNP 0008.scaffold00029 181628 1 A T scaffold5504 ScafM SNP 0008.scaffold00029 181636 1 A C scaffold5504 ScafM SNP 0008.scaffold00029 181648 1 T A scaffold5504 Both SNP 0008.scaffold00029 181669 1 A G scaffold5504 Both SNP 0008.scaffold00029 181691 1 G A scaffold5504 Both SNP 0008.scaffold00029 181768 1 C T scaffold5504 Both SNP 0008.scaffold00029 181998 1 A C scaffold5504 Both SNP 0008.scaffold00029 182187 1 G C scaffold5504 Both SNP 0008.scaffold00029 182244 1 C G scaffold5504 Both SNP 0008.scaffold00029 182252 1 C A scaffold5504 Both SNP 0008.scaffold00029 182309 1 C T scaffold5504 Both SNP 0008.scaffold00029 182320 1 C T scaffold5504 Both SNP 0008.scaffold00029 182363 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 182390 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 182407 1 T G scaffold5504 ScafM INDEL 0008.scaffold00029 182409 2 TC .. scaffold5504 ScafM SNP 0008.scaffold00029 182412 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 182418 5 AGATC ..... scaffold5504 ScafM SNP 0008.scaffold00029 182466 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 182511 8 TGGGGGGG ........ scaffold5504 ScafM INDEL 0008.scaffold00029 182525 7 GGTGGGG ....... scaffold5504 ScafM INDEL 0008.scaffold00029 182533 1 G . scaffold5504 ScafM INDEL 0008.scaffold00029 182618 2 .. CT scaffold5504 ScafM SNP 0008.scaffold00029 182639 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 182642 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 182648 1 T C scaffold5504 ScafM INDEL 0008.scaffold00029 182669 2 .. TA scaffold5504 ScafM SNP 0008.scaffold00029 182705 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 182711 1 C T scaffold5504 Both SNP 0008.scaffold00029 182908 1 G A scaffold5504 Both INDEL 0008.scaffold00029 182913 2 .. AA scaffold5504 ScafM INDEL 0008.scaffold00029 182982 2 AT .. scaffold5504 ScafM INDEL 0008.scaffold00029 182990 3 ... CCC scaffold5504 Both SNP 0008.scaffold00029 183066 1 T A scaffold5504 Both SNP 0008.scaffold00029 183090 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 183105 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 183111 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 183120 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 183137 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 183158 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 183163 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 183171 1 T C scaffold5504 ScafM SNP 0008.scaffold00029 183182 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 183211 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 183214 1 C G scaffold5504 ScafM SNP 0008.scaffold00029 183222 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 183226 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 183228 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 183230 1 G A scaffold5504 Both SNP 0008.scaffold00029 183334 1 C T scaffold5504 Both SNP 0008.scaffold00029 183618 1 T A scaffold5504 Both SNP 0008.scaffold00029 183652 1 G T scaffold5504 Both SNP 0008.scaffold00029 183665 1 T C scaffold5504 Both SNP 0008.scaffold00029 183722 1 T G scaffold5504 Both SNP 0008.scaffold00029 183746 1 T A scaffold5504 Both SNP 0008.scaffold00029 183784 1 C T scaffold5504 ScafM INDEL 0008.scaffold00029 183901 8 TATTTGAT ........ scaffold5504 ScafM SNP 0008.scaffold00029 184925 1 C T scaffold558 ScafM SNP 0008.scaffold00029 184960 1 T C scaffold558 ScafM SNP 0008.scaffold00029 185904 1 C T scaffold5504 Both SNP 0008.scaffold00029 186153 1 G A scaffold5504 Both SNP 0008.scaffold00029 186326 1 C G scaffold5504 Both SNP 0008.scaffold00029 186342 1 C T scaffold5504 Both SNP 0008.scaffold00029 186410 1 A G scaffold5504 ReadM SNP 0008.scaffold00029 186651 1 G A - ReadM SNP 0008.scaffold00029 186715 1 C A - ReadM SNP 0008.scaffold00029 186738 1 G C - ReadM SNP 0008.scaffold00029 186787 1 C T - ReadM SNP 0008.scaffold00029 186806 1 A G - ReadM SNP 0008.scaffold00029 186918 1 G A - ReadM SNP 0008.scaffold00029 187226 1 C G - ReadM SNP 0008.scaffold00029 187233 1 G A - ReadM SNP 0008.scaffold00029 187353 1 A C - ReadM SNP 0008.scaffold00029 187396 1 A G - ReadM SNP 0008.scaffold00029 187500 1 T C - ReadM INDEL 0008.scaffold00029 187715 1 C . - ReadM SNP 0008.scaffold00029 187743 1 G A - ReadM SNP 0008.scaffold00029 187854 1 G T - ReadM SNP 0008.scaffold00029 188035 1 G C - ReadM SNP 0008.scaffold00029 188243 1 G A - ReadM SNP 0008.scaffold00029 188632 1 C T - ReadM SNP 0008.scaffold00029 188688 1 A G - ReadM SNP 0008.scaffold00029 188923 1 A C - ReadM INDEL 0008.scaffold00029 189723 1 A . - ReadM SNP 0008.scaffold00029 190010 1 C T - ReadM SNP 0008.scaffold00029 190035 1 C A - Both SNP 0008.scaffold00029 190177 1 T A scaffold5504 ScafM SNP 0008.scaffold00029 190224 1 T G scaffold5504 ScafM SNP 0008.scaffold00029 190226 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 190486 5 CAATT ..... scaffold5504 ScafM SNP 0008.scaffold00029 190492 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 190494 3 TAG ..C scaffold5504 ScafM INDEL 0008.scaffold00029 190499 1 A . scaffold5504 ScafM INDEL 0008.scaffold00029 190501 6 GGAGGC ...... scaffold5504 ScafM INDEL 0008.scaffold00029 190509 5 TTTTC .AAAA scaffold5504 Both SNP 0008.scaffold00029 190569 1 G T scaffold5504 ScafM INDEL 0008.scaffold00029 191052 3 ... AAA scaffold5504 ScafM SNP 0008.scaffold00029 191057 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 191067 1 . G scaffold5504 ScafM SNP 0008.scaffold00029 191162 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 191204 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 191286 8 GCCATATG ........ scaffold5504 ScafM SNP 0008.scaffold00029 191538 1 C T scaffold5504 ReadM SNP 0008.scaffold00029 193233 1 C T - ReadM SNP 0008.scaffold00029 193241 1 C T - ReadM SNP 0008.scaffold00029 193329 1 A G - ReadM SNP 0008.scaffold00029 193459 1 T A - Both SNP 0008.scaffold00029 193709 1 A T scaffold5504 ScafM INDEL 0008.scaffold00029 193723 1 . T scaffold5504 Both SNP 0008.scaffold00029 193905 1 C T scaffold5504 Both SNP 0008.scaffold00029 193936 1 C A scaffold5504 ReadM INDEL 0008.scaffold00029 194064 1 T . - ReadM SNP 0008.scaffold00029 194169 1 A C - ReadM INDEL 0008.scaffold00029 194209 1 . A - ReadM SNP 0008.scaffold00029 194220 1 A G - ReadM SNP 0008.scaffold00029 194265 1 T C - ReadM SNP 0008.scaffold00029 194384 1 C T - ReadM SNP 0008.scaffold00029 194414 1 A C - ReadM SNP 0008.scaffold00029 194427 1 G A - ReadM SNP 0008.scaffold00029 194473 1 A C - ReadM SNP 0008.scaffold00029 194714 1 T C - ReadM SNP 0008.scaffold00029 194725 1 G A - ReadM SNP 0008.scaffold00029 194780 1 A T - ReadM SNP 0008.scaffold00029 194798 1 A C - ReadM SNP 0008.scaffold00029 195086 1 T C - ReadM SNP 0008.scaffold00029 195169 1 G A - ReadM SNP 0008.scaffold00029 195303 1 G T - ReadM SNP 0008.scaffold00029 195369 1 T A - ScafM SNP 0008.scaffold00029 195620 1 C T scaffold5504 ScafM SNP 0008.scaffold00029 195645 1 C A scaffold5504 ScafM SNP 0008.scaffold00029 195651 1 C T scaffold5504 Both SNP 0008.scaffold00029 195721 1 C T scaffold5504 Both SNP 0008.scaffold00029 195723 1 A G scaffold5504 ScafM SNP 0008.scaffold00029 195776 1 C T scaffold5504 Both SNP 0008.scaffold00029 195925 1 T A scaffold5504 Both SNP 0008.scaffold00029 196027 1 T C scaffold5504 Both SNP 0008.scaffold00029 196070 1 A G scaffold5504 Both SNP 0008.scaffold00029 196097 1 A T scaffold5504 Both SNP 0008.scaffold00029 196099 1 C T scaffold5504 Both SNP 0008.scaffold00029 196250 1 G A scaffold5504 ReadM INDEL 0008.scaffold00029 196719 1 . T - ReadM SNP 0008.scaffold00029 197185 1 T C - ReadM SNP 0008.scaffold00029 197234 1 C T - ReadM SNP 0008.scaffold00029 197469 1 C T - ReadM SNP 0008.scaffold00029 197657 1 A T - ReadM SNP 0008.scaffold00029 197667 1 C A - ReadM SNP 0008.scaffold00029 198314 1 G A - ReadM SNP 0008.scaffold00029 198459 1 C T - ReadM SNP 0008.scaffold00029 198503 1 A G - ReadM SNP 0008.scaffold00029 198722 1 C T - ReadM SNP 0008.scaffold00029 198795 1 A T - ReadM SNP 0008.scaffold00029 199156 1 A G - ReadM SNP 0008.scaffold00029 199189 1 A G - ScafM INDEL 0008.scaffold00029 199437 6 ...... ATTATC scaffold5504 ReadM SNP 0008.scaffold00029 199769 1 A G - ReadM SNP 0008.scaffold00029 199824 1 T C - Both SNP 0008.scaffold00029 199951 1 A T scaffold5504 ReadM SNP 0008.scaffold00029 200228 1 C G - Both SNP 0008.scaffold00029 200344 1 T A scaffold5504 Both SNP 0008.scaffold00029 200468 1 A G scaffold5504 Both SNP 0008.scaffold00029 200514 1 C T scaffold5504 Both SNP 0008.scaffold00029 200546 1 C G scaffold5504 ScafM INDEL 0008.scaffold00029 200582 3 AGT ... scaffold5504 ScafM INDEL 0008.scaffold00029 200656 3 ... ATA scaffold5504 ReadM INDEL 0008.scaffold00029 200710 1 T . - Both INDEL 0008.scaffold00029 200711 1 A . scaffold5504 Both INDEL 0008.scaffold00029 200813 3 ... CAT scaffold5504 Both SNP 0008.scaffold00029 200877 1 G C scaffold5504 Both SNP 0008.scaffold00029 200905 1 A G scaffold5504 Both SNP 0008.scaffold00029 200971 1 G A scaffold5504 ScafM SNP 0008.scaffold00029 201229 1 G A scaffold5504 ScafM INDEL 0008.scaffold00029 201238 3 ... TAT scaffold5504 Both SNP 0008.scaffold00029 201393 1 G T scaffold5504 Both SNP 0008.scaffold00029 201417 1 G T scaffold5504 Both SNP 0008.scaffold00029 201420 1 A G scaffold5504 ScafM INDEL 0008.scaffold00029 210284 2 .. AA scaffold5504 ScafM INDEL 0008.scaffold00029 210655 1 . C scaffold5504 ScafM SNP 0008.scaffold00029 219523 1 G T scaffold5504 ScafM SNP 0008.scaffold00029 219559 1 G A scaffold5504 Both SNP 0008.scaffold00029 241516 1 A C scaffold5504 ScafM INDEL 0008.scaffold00029 261098 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 278455 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 302752 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 302821 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 302842 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 302885 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 302903 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 302928 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 302939 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 302945 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 302947 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 302957 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 303865 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 303897 1 C A scaffold4197 Both INDEL 0008.scaffold00029 303925 1 A . scaffold4197 ScafM SNP 0008.scaffold00029 303955 1 C G scaffold4197 Both SNP 0008.scaffold00029 303964 1 G A scaffold4197 Both INDEL 0008.scaffold00029 304002 1 . T scaffold4197 ScafM INDEL 0008.scaffold00029 304082 4 ATTT .... scaffold4197 ScafM SNP 0008.scaffold00029 304091 1 G A scaffold4197 Both SNP 0008.scaffold00029 304136 1 G A scaffold4197 Both SNP 0008.scaffold00029 304217 1 G T scaffold4197 Both SNP 0008.scaffold00029 304277 1 T A scaffold4197 Both SNP 0008.scaffold00029 304380 1 C T scaffold4197 Both SNP 0008.scaffold00029 304604 1 C A scaffold4197 Both INDEL 0008.scaffold00029 304663 3 TTT ... scaffold4197 ScafM SNP 0008.scaffold00029 304784 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 304788 2 GT TG scaffold4197 Both SNP 0008.scaffold00029 305024 1 G A scaffold4197 Both SNP 0008.scaffold00029 305220 1 C T scaffold4197 Both SNP 0008.scaffold00029 305452 1 C T scaffold4197 Both SNP 0008.scaffold00029 305504 1 G A scaffold4197 Both SNP 0008.scaffold00029 305662 1 T A scaffold4197 ReadM INDEL 0008.scaffold00029 305900 1 G . - ReadM SNP 0008.scaffold00029 305950 1 G T - ReadM SNP 0008.scaffold00029 305979 1 C T - ReadM SNP 0008.scaffold00029 306044 1 C T - ReadM SNP 0008.scaffold00029 306061 1 A G - ReadM INDEL 0008.scaffold00029 306093 1 . A - ReadM SNP 0008.scaffold00029 306132 1 A T - ReadM SNP 0008.scaffold00029 306184 1 T C - ReadM SNP 0008.scaffold00029 306200 1 G A - ReadM SNP 0008.scaffold00029 306206 1 T G - ReadM SNP 0008.scaffold00029 306240 1 C G - ReadM SNP 0008.scaffold00029 306342 1 C T - ReadM SNP 0008.scaffold00029 306418 1 T C - ReadM SNP 0008.scaffold00029 306485 1 T C - ReadM SNP 0008.scaffold00029 306496 1 G C - ReadM SNP 0008.scaffold00029 306506 1 T C - ReadM SNP 0008.scaffold00029 306616 1 C T - ReadM SNP 0008.scaffold00029 306706 1 G T - ReadM SNP 0008.scaffold00029 306750 1 A G - ReadM SNP 0008.scaffold00029 306822 1 C A - ReadM SNP 0008.scaffold00029 307083 1 A G - ReadM SNP 0008.scaffold00029 307152 1 C T - ReadM SNP 0008.scaffold00029 307292 1 C T - ReadM INDEL 0008.scaffold00029 307327 1 . T - ReadM SNP 0008.scaffold00029 307337 1 C G - ReadM SNP 0008.scaffold00029 307387 1 C T - ReadM SNP 0008.scaffold00029 307451 1 G A - ReadM SNP 0008.scaffold00029 307494 1 C T - ReadM SNP 0008.scaffold00029 307549 1 G A - ReadM SNP 0008.scaffold00029 307578 1 T C - ReadM SNP 0008.scaffold00029 307709 1 G A - ReadM SNP 0008.scaffold00029 307720 1 G A - ReadM SNP 0008.scaffold00029 307760 1 A G - ReadM SNP 0008.scaffold00029 307836 1 A C - ReadM SNP 0008.scaffold00029 307847 1 A C - ReadM SNP 0008.scaffold00029 307852 1 T A - Both SNP 0008.scaffold00029 307900 1 T C scaffold4197 Both SNP 0008.scaffold00029 307926 1 G A scaffold4197 Both SNP 0008.scaffold00029 307932 1 G T scaffold4197 Both SNP 0008.scaffold00029 307978 1 G C scaffold4197 Both SNP 0008.scaffold00029 308056 1 C T scaffold4197 Both SNP 0008.scaffold00029 308061 1 C A scaffold4197 Both SNP 0008.scaffold00029 308105 1 G A scaffold4197 Both INDEL 0008.scaffold00029 308153 1 A . scaffold4197 ScafM INDEL 0008.scaffold00029 308231 1 . T scaffold4197 ScafM INDEL 0008.scaffold00029 308265 2 .. TC scaffold4197 Both SNP 0008.scaffold00029 308303 1 G A scaffold4197 Both SNP 0008.scaffold00029 308307 1 G C scaffold4197 Both SNP 0008.scaffold00029 308416 1 C A scaffold4197 Both SNP 0008.scaffold00029 308454 1 C T scaffold4197 Both SNP 0008.scaffold00029 308469 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 308604 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 308606 1 C T scaffold4197 Both SNP 0008.scaffold00029 308619 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 308756 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 308887 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 308890 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 308901 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 308918 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 310412 1 G T - ReadM SNP 0008.scaffold00029 310437 1 A T - ReadM SNP 0008.scaffold00029 310507 1 T G - ReadM SNP 0008.scaffold00029 310623 1 C T - ReadM INDEL 0008.scaffold00029 310627 1 . T - ReadM SNP 0008.scaffold00029 310749 1 G A - ReadM SNP 0008.scaffold00029 310754 1 G C - ReadM SNP 0008.scaffold00029 310810 1 C T - ReadM SNP 0008.scaffold00029 310834 1 C T - ReadM SNP 0008.scaffold00029 310861 1 T C - ReadM SNP 0008.scaffold00029 311035 1 G A - ReadM SNP 0008.scaffold00029 311116 1 C T - ReadM INDEL 0008.scaffold00029 311158 1 . C - ReadM SNP 0008.scaffold00029 311220 1 T C - ReadM SNP 0008.scaffold00029 311226 1 A T - ReadM SNP 0008.scaffold00029 311230 1 G A - ReadM SNP 0008.scaffold00029 311374 1 G A - ReadM SNP 0008.scaffold00029 311428 1 T C - ReadM SNP 0008.scaffold00029 311461 1 G A - ReadM SNP 0008.scaffold00029 311562 1 G C - ReadM SNP 0008.scaffold00029 311587 1 C T - ReadM SNP 0008.scaffold00029 311643 1 T C - ReadM SNP 0008.scaffold00029 311795 1 G A - ReadM SNP 0008.scaffold00029 311800 1 G A - ReadM SNP 0008.scaffold00029 311803 1 T C - Both SNP 0008.scaffold00029 311835 1 A T scaffold4197 Both SNP 0008.scaffold00029 311845 1 T C scaffold4197 Both SNP 0008.scaffold00029 311924 1 A C scaffold4197 Both SNP 0008.scaffold00029 311952 1 T G scaffold4197 Both SNP 0008.scaffold00029 311954 1 T C scaffold4197 Both SNP 0008.scaffold00029 311988 1 C A scaffold4197 Both SNP 0008.scaffold00029 312008 1 T C scaffold4197 Both SNP 0008.scaffold00029 312018 1 C T scaffold4197 Both SNP 0008.scaffold00029 312131 1 G A scaffold4197 Both INDEL 0008.scaffold00029 312173 1 T . scaffold4197 Both SNP 0008.scaffold00029 312185 1 T C scaffold4197 ScafM INDEL 0008.scaffold00029 312211 3 ... GCG scaffold4197 Both SNP 0008.scaffold00029 312326 1 T C scaffold4197 Both SNP 0008.scaffold00029 312367 2 CG AT scaffold4197 Both SNP 0008.scaffold00029 312381 1 G T scaffold4197 Both SNP 0008.scaffold00029 312430 1 C T scaffold4197 Both SNP 0008.scaffold00029 312448 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 312483 1 A G scaffold4197 Both SNP 0008.scaffold00029 312501 1 G A scaffold4197 Both SNP 0008.scaffold00029 312530 1 C A scaffold4197 Both SNP 0008.scaffold00029 312571 1 G C scaffold4197 Both SNP 0008.scaffold00029 312625 1 T C scaffold4197 Both SNP 0008.scaffold00029 312633 1 A G scaffold4197 Both SNP 0008.scaffold00029 312648 1 A T scaffold4197 Both SNP 0008.scaffold00029 312685 1 A G scaffold4197 Both SNP 0008.scaffold00029 312741 1 A G scaffold4197 Both SNP 0008.scaffold00029 312771 1 G C scaffold4197 Both SNP 0008.scaffold00029 313025 1 G A scaffold4197 Both SNP 0008.scaffold00029 313034 1 T A scaffold4197 Both SNP 0008.scaffold00029 313048 1 G A scaffold4197 Both SNP 0008.scaffold00029 313097 1 A G scaffold4197 Both SNP 0008.scaffold00029 313113 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 313126 1 A T scaffold4197 ReadM INDEL 0008.scaffold00029 313214 1 C . - ScafM INDEL 0008.scaffold00029 313214 2 CC .G scaffold4197 Both SNP 0008.scaffold00029 313326 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 313799 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 313810 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 313816 1 T C scaffold4197 ScafM INDEL 0008.scaffold00029 313818 2 TT .. scaffold4197 ScafM INDEL 0008.scaffold00029 313842 1 . T scaffold4197 ScafM INDEL 0008.scaffold00029 313876 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 313891 1 G A scaffold4197 Both SNP 0008.scaffold00029 314169 1 T C scaffold4197 Both SNP 0008.scaffold00029 314256 1 G C scaffold4197 Both SNP 0008.scaffold00029 314418 2 AT GG scaffold4197 Both SNP 0008.scaffold00029 314478 1 C T scaffold4197 Both SNP 0008.scaffold00029 314532 1 G T scaffold4197 Both SNP 0008.scaffold00029 314594 1 T C scaffold4197 Both INDEL 0008.scaffold00029 314647 3 ... TTG scaffold4197 Both SNP 0008.scaffold00029 314711 1 G A scaffold4197 Both SNP 0008.scaffold00029 314774 1 G A scaffold4197 Both INDEL 0008.scaffold00029 314864 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 314945 1 G A scaffold4197 ScafM INDEL 0008.scaffold00029 314956 3 ... TAT scaffold4197 ScafM SNP 0008.scaffold00029 314976 1 C T scaffold4197 Both SNP 0008.scaffold00029 314982 1 A G scaffold4197 Both SNP 0008.scaffold00029 315029 1 G A scaffold4197 Both SNP 0008.scaffold00029 315061 1 A C scaffold4197 ReadM SNP 0008.scaffold00029 315247 1 T G - ScafM SNP 0008.scaffold00029 315453 1 A T scaffold4197 Both SNP 0008.scaffold00029 315555 1 C T scaffold4197 Both SNP 0008.scaffold00029 315576 1 G C scaffold4197 Both SNP 0008.scaffold00029 315589 1 C T scaffold4197 Both SNP 0008.scaffold00029 315634 1 G C scaffold4197 Both SNP 0008.scaffold00029 315657 1 A G scaffold4197 Both INDEL 0008.scaffold00029 315815 1 A . scaffold4197 Both SNP 0008.scaffold00029 315864 1 G A scaffold4197 Both SNP 0008.scaffold00029 316035 1 G A scaffold4197 Both SNP 0008.scaffold00029 316053 1 T C scaffold4197 Both SNP 0008.scaffold00029 316115 1 T G scaffold4197 ReadM SNP 0008.scaffold00029 316318 1 C T - ReadM SNP 0008.scaffold00029 316439 1 C T - ReadM SNP 0008.scaffold00029 316699 1 C T - ReadM INDEL 0008.scaffold00029 316750 1 . C - ReadM SNP 0008.scaffold00029 316758 1 T C - ReadM SNP 0008.scaffold00029 316859 1 A G - ReadM SNP 0008.scaffold00029 316865 1 G A - Both SNP 0008.scaffold00029 316971 1 T A scaffold4197 Both SNP 0008.scaffold00029 317064 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 317106 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 317133 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 317145 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 317148 1 T C scaffold4197 ScafM INDEL 0008.scaffold00029 317244 4 .... GCAT scaffold4197 ReadM SNP 0008.scaffold00029 317327 1 C T - ReadM SNP 0008.scaffold00029 317335 1 C T - Both INDEL 0008.scaffold00029 317348 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 317388 1 G A scaffold4197 Both SNP 0008.scaffold00029 317412 1 A G scaffold4197 Both INDEL 0008.scaffold00029 317420 1 A . scaffold4197 Both SNP 0008.scaffold00029 317454 1 C A scaffold4197 ReadM SNP 0008.scaffold00029 317545 1 T C - ReadM SNP 0008.scaffold00029 317651 1 C A - ReadM SNP 0008.scaffold00029 317703 1 T C - ReadM SNP 0008.scaffold00029 317705 1 G A - ReadM SNP 0008.scaffold00029 317744 1 T C - ReadM SNP 0008.scaffold00029 317837 1 A G - ReadM SNP 0008.scaffold00029 317960 1 G A - ReadM SNP 0008.scaffold00029 317993 1 C G - ReadM SNP 0008.scaffold00029 318019 1 T G - ReadM SNP 0008.scaffold00029 318072 1 C A - ReadM SNP 0008.scaffold00029 318151 1 C T - ReadM SNP 0008.scaffold00029 318167 1 G T - ReadM SNP 0008.scaffold00029 318170 1 C T - ReadM SNP 0008.scaffold00029 318314 1 C T - ReadM SNP 0008.scaffold00029 318406 1 T C - ReadM SNP 0008.scaffold00029 318515 1 T C - ReadM SNP 0008.scaffold00029 318595 1 A C - ReadM SNP 0008.scaffold00029 318613 1 C T - ReadM SNP 0008.scaffold00029 318671 1 T A - ReadM SNP 0008.scaffold00029 318785 1 C T - ReadM SNP 0008.scaffold00029 318869 1 C T - ReadM SNP 0008.scaffold00029 318889 1 T C - ReadM SNP 0008.scaffold00029 318900 1 T C - ReadM INDEL 0008.scaffold00029 318940 1 . C - ReadM SNP 0008.scaffold00029 319012 1 A C - ReadM SNP 0008.scaffold00029 319071 1 C T - ReadM SNP 0008.scaffold00029 319228 1 G A - ReadM SNP 0008.scaffold00029 319301 1 A G - ReadM SNP 0008.scaffold00029 319316 1 G A - ReadM SNP 0008.scaffold00029 319329 1 T C - ReadM SNP 0008.scaffold00029 319408 1 T G - ReadM SNP 0008.scaffold00029 319480 1 A G - ReadM SNP 0008.scaffold00029 319605 1 T C - ReadM SNP 0008.scaffold00029 319675 1 T G - ReadM SNP 0008.scaffold00029 319696 1 C G - ReadM SNP 0008.scaffold00029 319790 1 C T - ReadM SNP 0008.scaffold00029 319801 1 T G - ReadM SNP 0008.scaffold00029 319862 1 G T - Both SNP 0008.scaffold00029 319886 1 T C scaffold4197 Both SNP 0008.scaffold00029 319960 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 320019 1 C G - ReadM SNP 0008.scaffold00029 320047 1 A G - ReadM SNP 0008.scaffold00029 320072 1 A T - ReadM SNP 0008.scaffold00029 320127 1 G C - ReadM SNP 0008.scaffold00029 320172 1 T C - ReadM SNP 0008.scaffold00029 320299 1 A C - ReadM SNP 0008.scaffold00029 320333 1 C A - ReadM SNP 0008.scaffold00029 320398 1 T C - ReadM SNP 0008.scaffold00029 320438 1 A C - ReadM SNP 0008.scaffold00029 320460 1 T C - ReadM SNP 0008.scaffold00029 320519 1 C T - ReadM SNP 0008.scaffold00029 320572 1 A G - ReadM SNP 0008.scaffold00029 320579 1 G A - ReadM SNP 0008.scaffold00029 320612 1 T C - ReadM SNP 0008.scaffold00029 320637 1 G T - ReadM SNP 0008.scaffold00029 320696 1 C A - ReadM SNP 0008.scaffold00029 320779 1 T G - ReadM SNP 0008.scaffold00029 320807 1 G A - ReadM SNP 0008.scaffold00029 320943 1 A G - ReadM SNP 0008.scaffold00029 320950 1 C T - ReadM SNP 0008.scaffold00029 321029 1 C T - ReadM SNP 0008.scaffold00029 321115 1 A G - ReadM SNP 0008.scaffold00029 321140 1 A C - ReadM SNP 0008.scaffold00029 321243 1 C T - ReadM SNP 0008.scaffold00029 321518 1 G A - ReadM SNP 0008.scaffold00029 321544 1 G A - ReadM SNP 0008.scaffold00029 321697 1 A G - ReadM SNP 0008.scaffold00029 321734 1 A G - ReadM SNP 0008.scaffold00029 321793 1 G A - ReadM SNP 0008.scaffold00029 321980 1 A G - ReadM SNP 0008.scaffold00029 322142 1 G C - ReadM SNP 0008.scaffold00029 322187 1 A G - ReadM SNP 0008.scaffold00029 322283 1 G A - ReadM SNP 0008.scaffold00029 322291 1 G A - ReadM SNP 0008.scaffold00029 322493 1 G A - ReadM SNP 0008.scaffold00029 322519 1 A G - ReadM SNP 0008.scaffold00029 322560 1 T A - ReadM SNP 0008.scaffold00029 322565 1 A T - ReadM SNP 0008.scaffold00029 322586 1 G C - ReadM INDEL 0008.scaffold00029 322610 1 . G - ReadM SNP 0008.scaffold00029 322681 1 A T - ReadM SNP 0008.scaffold00029 322691 1 A G - ReadM SNP 0008.scaffold00029 322771 1 C G - ReadM SNP 0008.scaffold00029 322783 1 T G - Both SNP 0008.scaffold00029 322922 1 C T scaffold4197 Both SNP 0008.scaffold00029 322930 1 A G scaffold4197 Both SNP 0008.scaffold00029 322967 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 323054 1 A G - ReadM SNP 0008.scaffold00029 323059 1 T C - ReadM SNP 0008.scaffold00029 323075 1 A C - ScafM SNP 0008.scaffold00029 324352 1 A T scaffold4197 ScafM INDEL 0008.scaffold00029 324359 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 324374 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 324391 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 324396 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 324414 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 324426 1 C T scaffold4197 ScafM INDEL 0008.scaffold00029 324512 18 CAGCCACGACCTCCTTCA .................. scaffold4197 ScafM INDEL 0008.scaffold00029 324600 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 324620 1 G A scaffold4197 ReadM SNP 0008.scaffold00029 325181 1 A G - ReadM SNP 0008.scaffold00029 325192 1 G T - ReadM SNP 0008.scaffold00029 325202 1 A C - ReadM SNP 0008.scaffold00029 325262 1 C T - ReadM SNP 0008.scaffold00029 325266 1 C G - ReadM SNP 0008.scaffold00029 325356 1 G A - ReadM SNP 0008.scaffold00029 325450 1 C T - ReadM SNP 0008.scaffold00029 325640 1 A G - ReadM SNP 0008.scaffold00029 325710 1 G A - ReadM SNP 0008.scaffold00029 325718 1 C T - ReadM SNP 0008.scaffold00029 325819 1 T A - ReadM SNP 0008.scaffold00029 325837 1 T C - ReadM SNP 0008.scaffold00029 325922 1 C T - ReadM SNP 0008.scaffold00029 325951 1 A T - ScafM SNP 0008.scaffold00029 325999 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 326208 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 326216 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 326236 2 GA AG scaffold4197 ScafM SNP 0008.scaffold00029 326246 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 326582 1 C T - ReadM SNP 0008.scaffold00029 326584 1 G A - ReadM SNP 0008.scaffold00029 326612 1 T C - ReadM SNP 0008.scaffold00029 326721 1 A T - ReadM SNP 0008.scaffold00029 326804 1 C T - ReadM SNP 0008.scaffold00029 326853 1 C T - ReadM SNP 0008.scaffold00029 326968 1 A G - ReadM SNP 0008.scaffold00029 326973 1 G A - Both SNP 0008.scaffold00029 327168 1 C G scaffold4197 ScafM INDEL 0008.scaffold00029 327290 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 327468 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 327547 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 327554 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 327597 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 328074 1 A G - ReadM SNP 0008.scaffold00029 328086 1 C T - ReadM SNP 0008.scaffold00029 328262 1 G T - ReadM SNP 0008.scaffold00029 328309 1 A G - ReadM SNP 0008.scaffold00029 328320 1 T A - ReadM SNP 0008.scaffold00029 328359 1 G A - ReadM SNP 0008.scaffold00029 328475 1 C T - ReadM SNP 0008.scaffold00029 328485 1 G A - ReadM SNP 0008.scaffold00029 328508 1 C T - ReadM SNP 0008.scaffold00029 328575 1 T A - ReadM SNP 0008.scaffold00029 328611 1 G A - ReadM SNP 0008.scaffold00029 328622 1 T A - Both SNP 0008.scaffold00029 328653 1 C T scaffold4197 Both SNP 0008.scaffold00029 328656 1 A G scaffold4197 Both SNP 0008.scaffold00029 328756 1 T G scaffold4197 Both SNP 0008.scaffold00029 328796 1 T G scaffold4197 Both SNP 0008.scaffold00029 328824 1 A G scaffold4197 Both SNP 0008.scaffold00029 328903 1 A G scaffold4197 Both SNP 0008.scaffold00029 328932 1 A T scaffold4197 Both SNP 0008.scaffold00029 329025 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 329224 1 C T - ReadM SNP 0008.scaffold00029 329230 1 C T - ScafM SNP 0008.scaffold00029 329320 1 G T scaffold4197 ReadM INDEL 0008.scaffold00029 329350 1 . C - ReadM SNP 0008.scaffold00029 329383 1 C T - ReadM SNP 0008.scaffold00029 329426 1 A G - ReadM SNP 0008.scaffold00029 329452 1 G T - ReadM SNP 0008.scaffold00029 329582 1 G T - ReadM SNP 0008.scaffold00029 329645 1 C T - ReadM SNP 0008.scaffold00029 329815 1 A G - ReadM SNP 0008.scaffold00029 329858 1 T A - ReadM SNP 0008.scaffold00029 329922 1 A G - Both INDEL 0008.scaffold00029 330029 1 . A scaffold4197 Both SNP 0008.scaffold00029 330053 1 T C scaffold4197 Both SNP 0008.scaffold00029 330075 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 330102 1 G A scaffold4197 Both INDEL 0008.scaffold00029 330116 1 . G scaffold4197 ScafM SNP 0008.scaffold00029 330140 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 330182 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 330185 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 330192 1 A G scaffold4197 Both SNP 0008.scaffold00029 330218 1 A T scaffold4197 Both SNP 0008.scaffold00029 330232 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 330287 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 330298 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 330308 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 330315 1 C T scaffold4197 Both SNP 0008.scaffold00029 330354 1 A G scaffold4197 Both SNP 0008.scaffold00029 330416 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 330467 1 G A - ReadM SNP 0008.scaffold00029 330518 1 C T - ReadM SNP 0008.scaffold00029 330547 1 G A - ReadM SNP 0008.scaffold00029 330736 1 G A - ReadM SNP 0008.scaffold00029 330765 1 T C - ReadM SNP 0008.scaffold00029 330795 1 G A - ReadM SNP 0008.scaffold00029 330928 1 G A - ReadM SNP 0008.scaffold00029 331024 1 G A - ReadM INDEL 0008.scaffold00029 331162 1 . A - ReadM SNP 0008.scaffold00029 331262 1 G C - ReadM INDEL 0008.scaffold00029 331288 2 .. AA - Both SNP 0008.scaffold00029 331361 1 A C scaffold4197 Both SNP 0008.scaffold00029 331376 1 C A scaffold4197 Both SNP 0008.scaffold00029 331419 1 A G scaffold4197 Both SNP 0008.scaffold00029 331601 1 G T scaffold4197 Both SNP 0008.scaffold00029 331635 1 G T scaffold4197 Both SNP 0008.scaffold00029 331651 1 T A scaffold4197 Both SNP 0008.scaffold00029 331758 1 T A scaffold4197 Both SNP 0008.scaffold00029 331779 1 C T scaffold4197 Both SNP 0008.scaffold00029 331800 1 A T scaffold4197 Both SNP 0008.scaffold00029 331917 1 A G scaffold4197 Both INDEL 0008.scaffold00029 331950 1 . A scaffold4197 ScafM INDEL 0008.scaffold00029 332080 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 332171 1 A G scaffold4197 Both SNP 0008.scaffold00029 332187 1 C T scaffold4197 Both SNP 0008.scaffold00029 332206 1 C T scaffold4197 Both SNP 0008.scaffold00029 332289 1 A G scaffold4197 Both SNP 0008.scaffold00029 332300 1 C T scaffold4197 ReadM INDEL 0008.scaffold00029 332318 1 . A - ReadM SNP 0008.scaffold00029 332346 1 A T - ReadM SNP 0008.scaffold00029 332435 1 G C - ReadM SNP 0008.scaffold00029 332440 1 A C - ReadM SNP 0008.scaffold00029 332452 1 C A - ReadM SNP 0008.scaffold00029 332586 1 A G - ReadM SNP 0008.scaffold00029 333638 1 T C - ReadM SNP 0008.scaffold00029 333752 1 G T - ReadM SNP 0008.scaffold00029 333797 1 A G - ReadM SNP 0008.scaffold00029 333812 1 A C - ReadM SNP 0008.scaffold00029 333821 1 A G - ReadM SNP 0008.scaffold00029 333887 1 C T - ReadM SNP 0008.scaffold00029 333899 1 C A - ReadM SNP 0008.scaffold00029 334161 1 A G - ReadM SNP 0008.scaffold00029 334176 1 T G - ReadM SNP 0008.scaffold00029 334331 1 C G - ReadM SNP 0008.scaffold00029 334353 1 T C - ReadM SNP 0008.scaffold00029 334423 1 C A - ReadM SNP 0008.scaffold00029 334544 1 A G - ReadM SNP 0008.scaffold00029 334570 1 T C - ReadM SNP 0008.scaffold00029 335055 1 T A - ReadM SNP 0008.scaffold00029 335066 1 A G - ReadM SNP 0008.scaffold00029 335202 1 A C - ScafM SNP 0008.scaffold00029 358827 1 A G scaffold5523 ScafM SNP 0008.scaffold00029 358843 2 CC TT scaffold5523 ScafM SNP 0008.scaffold00029 358862 2 AT TC scaffold5523 ScafM SNP 0008.scaffold00029 358879 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 358894 1 C G scaffold5523 ScafM SNP 0008.scaffold00029 358950 1 T A scaffold5523 ScafM SNP 0008.scaffold00029 358958 1 A G scaffold5523 ScafM SNP 0008.scaffold00029 358977 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 358993 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359011 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 359024 1 A G scaffold5523 ScafM SNP 0008.scaffold00029 359131 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359163 1 A T scaffold5523 ScafM SNP 0008.scaffold00029 359172 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 359198 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359203 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359227 1 A G scaffold5523 ScafM SNP 0008.scaffold00029 359229 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359242 1 T A scaffold5523 ScafM SNP 0008.scaffold00029 359264 1 A G scaffold5523 ScafM SNP 0008.scaffold00029 359287 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359300 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359305 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359310 1 C G scaffold5523 ScafM SNP 0008.scaffold00029 359374 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359393 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359426 1 A C scaffold5523 ScafM SNP 0008.scaffold00029 359448 1 G T scaffold5523 ScafM SNP 0008.scaffold00029 359462 1 G T scaffold5523 ScafM SNP 0008.scaffold00029 359478 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359482 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359487 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359489 1 G T scaffold5523 ScafM SNP 0008.scaffold00029 359499 1 T G scaffold5523 ScafM SNP 0008.scaffold00029 359507 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359509 1 A T scaffold5523 ScafM SNP 0008.scaffold00029 359513 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 359531 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 359541 1 C T scaffold5523 ScafM SNP 0008.scaffold00029 359544 1 T C scaffold5523 ScafM SNP 0008.scaffold00029 359572 1 G A scaffold5523 ScafM SNP 0008.scaffold00029 368238 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 368240 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 368256 2 TT AC scaffold4197 ScafM INDEL 0008.scaffold00029 368266 2 .. GG scaffold4197 ScafM SNP 0008.scaffold00029 368488 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 368510 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 368512 3 TTC ... scaffold4197 ScafM INDEL 0008.scaffold00029 368516 2 CG .. scaffold4197 ScafM SNP 0008.scaffold00029 368526 1 G A scaffold4197 ScafM INDEL 0008.scaffold00029 368539 5 TTGAA ..... scaffold4197 ScafM SNP 0008.scaffold00029 368550 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368555 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 368565 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 368591 2 TA AT scaffold4197 ScafM SNP 0008.scaffold00029 368594 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 368622 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368633 2 AA TG scaffold4197 ScafM SNP 0008.scaffold00029 368640 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 368649 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 368668 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 368684 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 368711 2 CC TA scaffold4197 ScafM SNP 0008.scaffold00029 368715 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 368722 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368729 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368749 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368753 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 368771 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 368778 2 TC AA scaffold4197 ScafM SNP 0008.scaffold00029 368784 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 368787 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 368803 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 368808 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 368824 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 368830 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 368852 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 368854 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 368899 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 368928 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 368939 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 368951 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 368957 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 369041 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 369071 2 CA TG scaffold4197 ScafM SNP 0008.scaffold00029 369074 2 AA TT scaffold4197 ScafM SNP 0008.scaffold00029 369081 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 369083 2 GT AC scaffold4197 ScafM SNP 0008.scaffold00029 369086 1 C A scaffold4197 ScafM INDEL 0008.scaffold00029 369090 1 C . scaffold4197 ScafM SNP 0008.scaffold00029 369093 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 369096 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369109 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 369116 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 369122 1 A T scaffold4197 ScafM INDEL 0008.scaffold00029 369124 1 A . scaffold4197 ScafM SNP 0008.scaffold00029 369128 2 GA AG scaffold4197 ScafM INDEL 0008.scaffold00029 369163 1 A . scaffold4197 ScafM SNP 0008.scaffold00029 369184 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 369194 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 369601 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 369607 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369619 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369629 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369631 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 369638 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 369724 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 369730 1 T G scaffold4197 ScafM INDEL 0008.scaffold00029 369756 1 . C scaffold4197 ScafM SNP 0008.scaffold00029 369779 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 369790 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 369792 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 369807 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 369812 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 369816 1 A T scaffold4197 ScafM INDEL 0008.scaffold00029 369860 4 .... TTTA scaffold4197 ScafM SNP 0008.scaffold00029 369863 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 369868 1 T G scaffold4197 ScafM INDEL 0008.scaffold00029 369871 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 369886 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 369889 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 369891 1 G T scaffold4197 ScafM INDEL 0008.scaffold00029 369899 4 ...G TTCT scaffold4197 ScafM SNP 0008.scaffold00029 369913 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369936 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 369945 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 369952 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 369955 1 A G scaffold4197 ScafM INDEL 0008.scaffold00029 369995 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 370013 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 370016 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 370019 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 370025 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 370032 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 370036 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 370049 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 370074 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 370088 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 370095 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 370104 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 370118 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 370358 1 G A scaffold19909 ScafM SNP 0008.scaffold00029 370368 2 AT GC scaffold19909 ScafM SNP 0008.scaffold00029 370371 2 TA CT scaffold19909 ScafM INDEL 0008.scaffold00029 370422 2 .. CT scaffold19909 ScafM SNP 0008.scaffold00029 370426 1 G A scaffold19909 ScafM SNP 0008.scaffold00029 370458 1 C T scaffold19909 ScafM SNP 0008.scaffold00029 370466 1 C T scaffold19909 ScafM SNP 0008.scaffold00029 370494 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370498 1 T A scaffold19909 ScafM SNP 0008.scaffold00029 370521 1 A C scaffold19909 ScafM SNP 0008.scaffold00029 370529 1 C T scaffold19909 ScafM SNP 0008.scaffold00029 370536 1 G A scaffold19909 ScafM SNP 0008.scaffold00029 370542 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370578 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370645 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370741 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370760 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370773 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370776 1 C T scaffold19909 ScafM SNP 0008.scaffold00029 370780 1 A C scaffold19909 ScafM SNP 0008.scaffold00029 370783 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370789 1 G C scaffold19909 ScafM SNP 0008.scaffold00029 370807 1 C T scaffold19909 ScafM SNP 0008.scaffold00029 370809 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370847 2 CA TT scaffold19909 ScafM SNP 0008.scaffold00029 370885 1 T A scaffold19909 ScafM SNP 0008.scaffold00029 370889 1 A G scaffold19909 ScafM SNP 0008.scaffold00029 370907 2 AA GT scaffold19909 ScafM SNP 0008.scaffold00029 370938 1 A T scaffold19909 ScafM INDEL 0008.scaffold00029 370964 7 AATTTCA ....... scaffold19909 ScafM SNP 0008.scaffold00029 370976 1 C G scaffold19909 ScafM SNP 0008.scaffold00029 370987 1 T G scaffold19909 ScafM INDEL 0008.scaffold00029 371100 2 AT .G scaffold4197 ScafM SNP 0008.scaffold00029 371106 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 371112 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 371155 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 371167 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 371241 24 AAAAGAAGAGAGGTTTTAAGGTAA ........................ scaffold4197 ScafM INDEL 0008.scaffold00029 371267 2 AA .. scaffold4197 ScafM SNP 0008.scaffold00029 371328 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 371354 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 371356 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 371386 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 371391 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 371404 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 371420 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 371432 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 371615 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 371708 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 371807 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 371918 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 371995 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 372004 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 372059 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 372125 1 C G scaffold4197 Both SNP 0008.scaffold00029 372188 1 G A scaffold4197 Both INDEL 0008.scaffold00029 372269 1 T . scaffold4197 Both SNP 0008.scaffold00029 372318 1 C G scaffold4197 ScafM INDEL 0008.scaffold00029 372328 1 . C scaffold4197 ScafM SNP 0008.scaffold00029 372392 2 TT AG scaffold4197 ScafM SNP 0008.scaffold00029 372400 1 A C scaffold4197 ScafM INDEL 0008.scaffold00029 372404 1 G . scaffold4197 ScafM INDEL 0008.scaffold00029 372477 3 TAA ... scaffold4197 ScafM SNP 0008.scaffold00029 372488 1 T G scaffold4197 ScafM INDEL 0008.scaffold00029 372716 18 TTAATGTAGCACCCAATT .................. scaffold4197 ScafM INDEL 0008.scaffold00029 372737 9 AACTACAGC ......... scaffold4197 ScafM INDEL 0008.scaffold00029 372748 4 CCAG .... scaffold4197 ScafM INDEL 0008.scaffold00029 372753 2 CT .. scaffold4197 ScafM SNP 0008.scaffold00029 372756 1 G T scaffold4197 ScafM INDEL 0008.scaffold00029 372760 3 AGG ... scaffold4197 ScafM SNP 0008.scaffold00029 372839 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 372855 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 373799 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 373801 1 A T scaffold4197 ScafM INDEL 0008.scaffold00029 373802 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 373806 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 373816 1 A T scaffold4197 ScafM INDEL 0008.scaffold00029 373826 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 373834 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 373837 2 TT AA scaffold4197 ScafM SNP 0008.scaffold00029 373951 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 374023 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 374040 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 374046 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 374263 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 374277 1 T C scaffold4197 ScafM INDEL 0008.scaffold00029 374292 5 AACTG ..... scaffold4197 ScafM INDEL 0008.scaffold00029 374299 3 TGT ..A scaffold4197 Both SNP 0008.scaffold00029 374321 1 A G scaffold4197 Both SNP 0008.scaffold00029 374359 1 C A scaffold4197 Both SNP 0008.scaffold00029 374369 1 G C scaffold4197 Both INDEL 0008.scaffold00029 374496 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 374499 1 A G scaffold4197 Both INDEL 0008.scaffold00029 374562 1 T . scaffold4197 Both SNP 0008.scaffold00029 374666 1 G C scaffold4197 ScafM SNP 0008.scaffold00029 374693 1 T A scaffold4197 Both SNP 0008.scaffold00029 374740 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 374768 1 A C scaffold4197 ReadM SNP 0008.scaffold00029 374837 1 G A - ReadM SNP 0008.scaffold00029 374931 1 A G - ReadM SNP 0008.scaffold00029 374957 1 T C - ScafM SNP 0008.scaffold00029 375001 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 375013 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 375018 1 G A scaffold4197 ScafM INDEL 0008.scaffold00029 375022 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 375041 1 G A scaffold4197 Both SNP 0008.scaffold00029 375073 1 A T scaffold4197 Both SNP 0008.scaffold00029 375109 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 375204 1 G A scaffold4197 Both SNP 0008.scaffold00029 375226 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 375285 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 375298 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 375300 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 375319 1 A G scaffold4197 Both SNP 0008.scaffold00029 375361 1 T C scaffold4197 Both SNP 0008.scaffold00029 375402 1 A G scaffold4197 Both SNP 0008.scaffold00029 375433 1 A C scaffold4197 Both INDEL 0008.scaffold00029 375462 1 . A scaffold4197 Both INDEL 0008.scaffold00029 375561 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 375563 1 G C scaffold4197 Both SNP 0008.scaffold00029 375582 1 T C scaffold4197 Both SNP 0008.scaffold00029 375629 1 A G scaffold4197 Both SNP 0008.scaffold00029 375777 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 375796 3 TAA ... scaffold4197 ReadM SNP 0008.scaffold00029 375918 1 G A - ReadM SNP 0008.scaffold00029 376055 1 C G - ReadM SNP 0008.scaffold00029 376170 1 A G - ReadM SNP 0008.scaffold00029 376193 1 C T - ReadM SNP 0008.scaffold00029 376237 1 C T - ReadM SNP 0008.scaffold00029 376272 1 T C - ReadM SNP 0008.scaffold00029 376401 1 G A - ReadM SNP 0008.scaffold00029 376516 1 C T - ReadM SNP 0008.scaffold00029 376871 1 T C - ReadM SNP 0008.scaffold00029 376878 1 G A - ReadM SNP 0008.scaffold00029 376883 1 C T - ReadM SNP 0008.scaffold00029 377086 1 T C - ReadM SNP 0008.scaffold00029 377150 1 T C - ReadM SNP 0008.scaffold00029 377275 1 C T - ReadM SNP 0008.scaffold00029 377293 1 T A - ReadM SNP 0008.scaffold00029 377302 1 T C - ReadM SNP 0008.scaffold00029 377557 1 A G - ReadM SNP 0008.scaffold00029 377599 2 GG AA - ReadM SNP 0008.scaffold00029 377684 1 C T - ReadM SNP 0008.scaffold00029 377769 1 G T - ReadM SNP 0008.scaffold00029 377956 1 A G - ReadM SNP 0008.scaffold00029 377970 1 T C - ScafM INDEL 0008.scaffold00029 378391 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 378393 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 378402 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 378417 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 378421 1 A G scaffold4197 ScafM INDEL 0008.scaffold00029 378423 6 TCTTAG ...... scaffold4197 ScafM SNP 0008.scaffold00029 378436 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 378440 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 378442 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 378496 1 A . scaffold4197 ScafM SNP 0008.scaffold00029 378503 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 378533 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 378542 2 GG .. scaffold4197 ScafM INDEL 0008.scaffold00029 378546 1 T . scaffold4197 ScafM INDEL 0008.scaffold00029 378548 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 378555 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 378564 1 C G scaffold4197 ReadM INDEL 0008.scaffold00029 378672 1 A . - ScafM SNP 0008.scaffold00029 378957 3 GGC TAT scaffold4197 ScafM INDEL 0008.scaffold00029 378963 3 GTT .AG scaffold4197 ScafM SNP 0008.scaffold00029 379001 1 T C scaffold4197 Both SNP 0008.scaffold00029 379014 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 379020 1 G A scaffold4197 Both SNP 0008.scaffold00029 379078 1 C A scaffold4197 Both SNP 0008.scaffold00029 379110 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 379137 1 G A scaffold4197 Both SNP 0008.scaffold00029 379190 1 T G scaffold4197 ScafM SNP 0008.scaffold00029 379247 1 A G scaffold4197 Both SNP 0008.scaffold00029 379283 1 T C scaffold4197 Both SNP 0008.scaffold00029 379336 1 A T scaffold4197 Both SNP 0008.scaffold00029 379389 1 A G scaffold4197 Both SNP 0008.scaffold00029 379425 1 G A scaffold4197 Both SNP 0008.scaffold00029 379457 1 T G scaffold4197 Both SNP 0008.scaffold00029 379525 1 A C scaffold4197 Both SNP 0008.scaffold00029 379536 1 G T scaffold4197 Both SNP 0008.scaffold00029 379564 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 379606 1 G C scaffold4197 Both SNP 0008.scaffold00029 379657 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 379730 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 379732 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 379738 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 379753 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 379759 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 379804 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 379813 1 C T scaffold4197 Both SNP 0008.scaffold00029 379849 1 C T scaffold4197 Both SNP 0008.scaffold00029 379900 1 A G scaffold4197 Both SNP 0008.scaffold00029 379958 1 A T scaffold4197 Both SNP 0008.scaffold00029 380102 1 A G scaffold4197 ReadM INDEL 0008.scaffold00029 380137 1 . G - ReadM SNP 0008.scaffold00029 380245 1 G A - ReadM SNP 0008.scaffold00029 380264 1 A C - ReadM SNP 0008.scaffold00029 380285 1 C T - ScafM SNP 0008.scaffold00029 381188 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 381258 1 A G scaffold4197 Both SNP 0008.scaffold00029 381352 1 G C scaffold4197 Both SNP 0008.scaffold00029 381528 1 G C scaffold4197 Both SNP 0008.scaffold00029 381599 1 A G scaffold4197 Both SNP 0008.scaffold00029 381670 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 381822 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 381827 2 GC AG scaffold4197 ScafM SNP 0008.scaffold00029 381833 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 381838 1 C T scaffold4197 Both SNP 0008.scaffold00029 381863 1 T C scaffold4197 Both SNP 0008.scaffold00029 382051 1 C G scaffold4197 Both SNP 0008.scaffold00029 382137 1 T A scaffold4197 ScafM INDEL 0008.scaffold00029 382569 3 ... TTT scaffold4197 Both SNP 0008.scaffold00029 382997 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 383015 1 T C scaffold4197 ScafM SNP 0008.scaffold00029 383017 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 383023 2 GT AA scaffold4197 Both INDEL 0008.scaffold00029 383038 1 . A scaffold4197 Both SNP 0008.scaffold00029 383465 1 T G scaffold4197 Both SNP 0008.scaffold00029 383599 1 T C scaffold4197 Both SNP 0008.scaffold00029 383616 1 T A scaffold4197 Both SNP 0008.scaffold00029 383678 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 383808 1 A G - ReadM SNP 0008.scaffold00029 383958 1 T C - ScafM SNP 0008.scaffold00029 401877 1 A C scaffold4197 ScafM SNP 0008.scaffold00029 401999 1 G T scaffold4197 ScafM INDEL 0008.scaffold00029 402328 15 GAATTAAGATTTTTA ............... scaffold4197 ReadM SNP 0008.scaffold00029 402717 1 A C - Both SNP 0008.scaffold00029 402924 1 T C scaffold4197 ReadM INDEL 0008.scaffold00029 403217 1 T . - Both SNP 0008.scaffold00029 403451 1 G C scaffold4197 ReadM INDEL 0008.scaffold00029 403866 1 . T - ReadM SNP 0008.scaffold00029 404315 1 T C - ReadM INDEL 0008.scaffold00029 404502 1 . T - ReadM SNP 0008.scaffold00029 404569 1 G A - ReadM SNP 0008.scaffold00029 404650 1 G A - ReadM SNP 0008.scaffold00029 404683 1 A T - ReadM SNP 0008.scaffold00029 404832 1 G T - ReadM SNP 0008.scaffold00029 404966 1 A G - Both INDEL 0008.scaffold00029 405289 1 . T scaffold4197 ReadM INDEL 0008.scaffold00029 405541 1 T . - ReadM SNP 0008.scaffold00029 405720 1 G A - ReadM SNP 0008.scaffold00029 405833 1 A G - ReadM SNP 0008.scaffold00029 405901 1 C T - ReadM SNP 0008.scaffold00029 406006 1 T A - Both SNP 0008.scaffold00029 406348 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 406368 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 406451 1 A G scaffold4197 Both SNP 0008.scaffold00029 406508 1 A T scaffold4197 Both SNP 0008.scaffold00029 406571 1 G T scaffold4197 ScafM INDEL 0008.scaffold00029 406621 2 .. TA scaffold4197 ScafM INDEL 0008.scaffold00029 406627 1 . A scaffold4197 ReadM SNP 0008.scaffold00029 406725 1 T C - ReadM SNP 0008.scaffold00029 406747 1 C G - ReadM SNP 0008.scaffold00029 406868 1 T A - ReadM SNP 0008.scaffold00029 406999 1 C G - ReadM SNP 0008.scaffold00029 407009 1 G A - ScafM SNP 0008.scaffold00029 407924 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 408124 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 408170 1 C T scaffold4197 ScafM INDEL 0008.scaffold00029 408178 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 408265 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 408287 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 408354 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 408533 1 G T scaffold4197 ReadM SNP 0008.scaffold00029 408986 1 A G - ReadM SNP 0008.scaffold00029 409157 1 A G - ReadM SNP 0008.scaffold00029 409203 1 C A - ReadM SNP 0008.scaffold00029 409216 1 A G - Both SNP 0008.scaffold00029 409343 1 G T scaffold4197 Both SNP 0008.scaffold00029 409396 1 A G scaffold4197 Both SNP 0008.scaffold00029 409619 1 C G scaffold4197 Both INDEL 0008.scaffold00029 409696 3 TTA ... scaffold4197 ReadM INDEL 0008.scaffold00029 409769 1 T . - ReadM INDEL 0008.scaffold00029 409854 1 . T - Both SNP 0008.scaffold00029 409876 1 C G scaffold4197 ReadM SNP 0008.scaffold00029 410074 1 A C - Both SNP 0008.scaffold00029 410430 1 A G scaffold4197 Both SNP 0008.scaffold00029 410486 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 410643 1 G A - ReadM SNP 0008.scaffold00029 410685 1 G T - ReadM SNP 0008.scaffold00029 410699 1 T G - ReadM SNP 0008.scaffold00029 410811 1 T C - ReadM SNP 0008.scaffold00029 410840 1 T C - ReadM SNP 0008.scaffold00029 410950 1 T C - ReadM SNP 0008.scaffold00029 411059 1 G A - ReadM SNP 0008.scaffold00029 411077 1 A G - ReadM SNP 0008.scaffold00029 411286 1 C T - ReadM SNP 0008.scaffold00029 411627 1 T C - ReadM SNP 0008.scaffold00029 411732 1 C T - ReadM SNP 0008.scaffold00029 411818 1 G A - Both SNP 0008.scaffold00029 412002 1 C T scaffold4197 ScafM INDEL 0008.scaffold00029 412104 78 .............................................................................. GGAATCGACACACTTTTTAAAAAAGTCATGTATGTGGAGATAGAAACATATTTCATATCCTTCACTCGTTTACCTTAA scaffold4197 ReadM SNP 0008.scaffold00029 412106 1 T G - ScafM INDEL 0008.scaffold00029 412106 3 ... AGG scaffold4197 Both SNP 0008.scaffold00029 412274 1 G A scaffold4197 ReadM SNP 0008.scaffold00029 412374 1 C G - ReadM SNP 0008.scaffold00029 412408 1 G T - ReadM SNP 0008.scaffold00029 412889 1 G C - ReadM SNP 0008.scaffold00029 413129 1 A G - ReadM SNP 0008.scaffold00029 413163 1 C G - Both SNP 0008.scaffold00029 413534 1 C T scaffold4197 Both SNP 0008.scaffold00029 413550 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 413859 1 A C - Both SNP 0008.scaffold00029 413907 1 G T scaffold4197 ReadM SNP 0008.scaffold00029 413953 1 C T - ScafM SNP 0008.scaffold00029 414194 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 414226 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 414317 1 A C - ReadM SNP 0008.scaffold00029 415065 1 A T - ReadM SNP 0008.scaffold00029 415096 1 T C - ReadM SNP 0008.scaffold00029 415168 1 A G - ReadM SNP 0008.scaffold00029 415251 1 G T - ReadM SNP 0008.scaffold00029 415585 1 G C - ReadM SNP 0008.scaffold00029 415793 1 T A - ReadM SNP 0008.scaffold00029 415941 1 G A - ReadM SNP 0008.scaffold00029 416223 1 A G - ReadM SNP 0008.scaffold00029 416469 1 T C - Both SNP 0008.scaffold00029 416766 1 T C scaffold4197 Both SNP 0008.scaffold00029 416908 1 G A scaffold4197 Both SNP 0008.scaffold00029 417262 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 417344 1 T C scaffold4197 Both SNP 0008.scaffold00029 418024 1 T G scaffold4197 ScafM INDEL 0008.scaffold00029 418153 3 ... AAA scaffold4197 ScafM SNP 0008.scaffold00029 418281 1 T A scaffold4197 ScafM INDEL 0008.scaffold00029 418283 1 . T scaffold4197 ScafM SNP 0008.scaffold00029 418285 1 A T scaffold4197 ScafM SNP 0008.scaffold00029 418287 1 T G scaffold4197 ScafM INDEL 0008.scaffold00029 418289 1 A . scaffold4197 ScafM INDEL 0008.scaffold00029 418316 1 . A scaffold4197 Both SNP 0008.scaffold00029 418446 1 G C scaffold4197 Both INDEL 0008.scaffold00029 418522 1 . A scaffold4197 ScafM SNP 0008.scaffold00029 418753 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 418880 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 419162 1 T C - Both SNP 0008.scaffold00029 419200 1 G A scaffold4197 Both SNP 0008.scaffold00029 419263 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 419390 1 G T - ReadM SNP 0008.scaffold00029 421600 1 G A - ReadM SNP 0008.scaffold00029 421644 1 G A - ReadM SNP 0008.scaffold00029 421818 1 C A - ReadM SNP 0008.scaffold00029 422004 1 C A - ReadM SNP 0008.scaffold00029 422012 1 C T - Both SNP 0008.scaffold00029 422554 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 423014 1 G T - ScafM SNP 0008.scaffold00029 423180 1 T G scaffold4197 ReadM SNP 0008.scaffold00029 423305 1 T G - ReadM SNP 0008.scaffold00029 423432 1 T A - ReadM SNP 0008.scaffold00029 423466 1 T C - ReadM SNP 0008.scaffold00029 423691 1 T C - ReadM SNP 0008.scaffold00029 423696 1 A G - ScafM INDEL 0008.scaffold00029 423733 1 . C scaffold4197 ReadM INDEL 0008.scaffold00029 423759 1 . T - ReadM SNP 0008.scaffold00029 423984 1 T G - ReadM SNP 0008.scaffold00029 424043 1 C T - ReadM SNP 0008.scaffold00029 424174 1 T C - ReadM SNP 0008.scaffold00029 424457 1 A G - ScafM INDEL 0008.scaffold00029 424592 2 .. TT scaffold4197 ScafM SNP 0008.scaffold00029 424594 1 G T scaffold4197 ScafM SNP 0008.scaffold00029 424599 1 G A scaffold4197 ReadM SNP 0008.scaffold00029 424669 1 C A - ReadM SNP 0008.scaffold00029 424840 1 T A - ReadM SNP 0008.scaffold00029 424856 1 A C - ReadM SNP 0008.scaffold00029 425379 1 C T - ReadM SNP 0008.scaffold00029 426952 1 T A - ReadM SNP 0008.scaffold00029 427236 1 C T - ReadM SNP 0008.scaffold00029 427350 1 A G - ReadM SNP 0008.scaffold00029 427507 1 G T - ReadM SNP 0008.scaffold00029 427570 1 A G - ReadM SNP 0008.scaffold00029 427575 1 T C - ReadM SNP 0008.scaffold00029 427670 1 A G - ReadM SNP 0008.scaffold00029 427758 1 A G - ReadM SNP 0008.scaffold00029 427832 1 C G - ReadM SNP 0008.scaffold00029 427875 1 G A - ReadM SNP 0008.scaffold00029 427929 1 G C - ReadM SNP 0008.scaffold00029 428411 1 A G - ReadM SNP 0008.scaffold00029 428419 1 A G - ReadM SNP 0008.scaffold00029 428538 1 G A - ReadM SNP 0008.scaffold00029 428549 1 T G - ReadM SNP 0008.scaffold00029 428718 1 G A - ReadM SNP 0008.scaffold00029 428848 1 A C - ReadM SNP 0008.scaffold00029 428868 1 T C - ReadM SNP 0008.scaffold00029 428897 1 G A - ReadM INDEL 0008.scaffold00029 428974 2 CG .. - ReadM SNP 0008.scaffold00029 429065 1 C A - ReadM SNP 0008.scaffold00029 429217 1 A G - ReadM SNP 0008.scaffold00029 429486 1 A G - ReadM SNP 0008.scaffold00029 429599 1 A C - ReadM SNP 0008.scaffold00029 429757 1 G A - ReadM SNP 0008.scaffold00029 429883 1 G A - ReadM INDEL 0008.scaffold00029 429900 1 . C - ScafM SNP 0008.scaffold00029 433595 1 T G scaffold21228 ScafM SNP 0008.scaffold00029 433600 1 A G scaffold21228 ScafM SNP 0008.scaffold00029 433606 1 G A scaffold21228 ScafM SNP 0008.scaffold00029 433612 1 T C scaffold21228 ScafM SNP 0008.scaffold00029 433676 1 A G scaffold21228 ScafM SNP 0008.scaffold00029 433691 1 C T scaffold21228 ScafM SNP 0008.scaffold00029 433747 2 GA AG scaffold21228 ScafM SNP 0008.scaffold00029 433780 1 A T scaffold21228 ReadM SNP 0008.scaffold00029 438128 1 A C - ReadM SNP 0008.scaffold00029 438165 1 T C - ReadM SNP 0008.scaffold00029 438213 1 A G - ReadM SNP 0008.scaffold00029 438217 1 A T - ReadM SNP 0008.scaffold00029 438341 1 A G - ReadM SNP 0008.scaffold00029 438363 1 C T - Both SNP 0008.scaffold00029 438704 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 438764 1 C T - ReadM SNP 0008.scaffold00029 438791 1 G T - ScafM INDEL 0008.scaffold00029 439180 1 T . scaffold4197 ScafM INDEL 0008.scaffold00029 439191 1 A . scaffold4197 Both SNP 0008.scaffold00029 439241 1 A T scaffold4197 Both SNP 0008.scaffold00029 439415 1 C A scaffold4197 ScafM SNP 0008.scaffold00029 439432 1 T A scaffold4197 ScafM SNP 0008.scaffold00029 439438 1 G A scaffold4197 ScafM SNP 0008.scaffold00029 439444 1 A T scaffold4197 Both INDEL 0008.scaffold00029 439998 1 T . scaffold4197 Both SNP 0008.scaffold00029 440013 1 T C scaffold4197 Both INDEL 0008.scaffold00029 440161 1 . A scaffold4197 ReadM SNP 0008.scaffold00029 440295 1 G A - ReadM SNP 0008.scaffold00029 440316 1 T G - ReadM SNP 0008.scaffold00029 440429 1 T A - ReadM SNP 0008.scaffold00029 441234 1 G T - ReadM SNP 0008.scaffold00029 441306 1 G T - ReadM SNP 0008.scaffold00029 441319 1 A C - ReadM INDEL 0008.scaffold00029 441351 1 T . - ReadM SNP 0008.scaffold00029 441403 1 T C - ReadM SNP 0008.scaffold00029 441524 1 C T - Both SNP 0008.scaffold00029 441561 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 441668 1 A T - ReadM SNP 0008.scaffold00029 441751 1 G A - ReadM SNP 0008.scaffold00029 441758 1 A T - ReadM SNP 0008.scaffold00029 442204 1 A G - Both SNP 0008.scaffold00029 442277 1 C T scaffold4197 Both SNP 0008.scaffold00029 442502 1 G A scaffold4197 ScafM INDEL 0008.scaffold00029 442628 1 . C scaffold4197 ReadM SNP 0008.scaffold00029 442638 1 G T - ReadM INDEL 0008.scaffold00029 442677 1 . A - Both SNP 0008.scaffold00029 442699 1 A T scaffold4197 Both SNP 0008.scaffold00029 442711 1 C T scaffold4197 Both SNP 0008.scaffold00029 442824 1 C T scaffold4197 Both SNP 0008.scaffold00029 442851 1 G C scaffold4197 Both INDEL 0008.scaffold00029 442878 1 C . scaffold4197 Both SNP 0008.scaffold00029 442933 1 C G scaffold4197 ReadM SNP 0008.scaffold00029 443066 1 A T - ReadM SNP 0008.scaffold00029 443084 1 T G - ReadM SNP 0008.scaffold00029 443134 1 G A - ScafM SNP 0008.scaffold00029 444563 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 444774 1 G A - ReadM SNP 0008.scaffold00029 444794 1 A T - ReadM SNP 0008.scaffold00029 445017 1 C T - ReadM SNP 0008.scaffold00029 445036 1 C T - ReadM SNP 0008.scaffold00029 445392 1 C A - ReadM SNP 0008.scaffold00029 445689 1 A T - ReadM SNP 0008.scaffold00029 445717 1 T A - ReadM SNP 0008.scaffold00029 446254 1 G A - ReadM SNP 0008.scaffold00029 446327 1 A G - ReadM SNP 0008.scaffold00029 446351 1 C G - ReadM SNP 0008.scaffold00029 446469 1 C A - Both SNP 0008.scaffold00029 446554 1 T A scaffold4197 Both INDEL 0008.scaffold00029 446562 1 . T scaffold4197 Both SNP 0008.scaffold00029 446613 1 A G scaffold4197 Both SNP 0008.scaffold00029 446728 1 T C scaffold4197 Both SNP 0008.scaffold00029 446908 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 447088 1 T C scaffold4197 ScafM INDEL 0008.scaffold00029 448819 5 GTTAA ..... scaffold4197 ScafM INDEL 0008.scaffold00029 448825 1 T . scaffold4197 ScafM SNP 0008.scaffold00029 448900 1 C T scaffold4197 ScafM SNP 0008.scaffold00029 448903 1 C A scaffold4197 Both SNP 0008.scaffold00029 448963 1 A G scaffold4197 Both SNP 0008.scaffold00029 449022 1 G C scaffold4197 Both SNP 0008.scaffold00029 449124 1 C T scaffold4197 Both SNP 0008.scaffold00029 449213 1 A T scaffold4197 Both INDEL 0008.scaffold00029 449255 2 AA .. scaffold4197 ReadM SNP 0008.scaffold00029 449360 1 T A - ReadM SNP 0008.scaffold00029 449374 1 G C - ReadM SNP 0008.scaffold00029 449512 1 T A - ReadM SNP 0008.scaffold00029 449550 1 T G - ReadM SNP 0008.scaffold00029 449586 1 T G - ReadM SNP 0008.scaffold00029 449626 1 T C - ReadM SNP 0008.scaffold00029 449722 1 C T - ReadM SNP 0008.scaffold00029 449830 1 G T - ReadM SNP 0008.scaffold00029 449914 1 G A - ReadM SNP 0008.scaffold00029 450085 1 C T - ReadM SNP 0008.scaffold00029 450244 1 T C - Both SNP 0008.scaffold00029 450293 1 C A scaffold4197 Both SNP 0008.scaffold00029 450310 1 G A scaffold4197 Both SNP 0008.scaffold00029 450396 1 G A scaffold4197 ScafM INDEL 0008.scaffold00029 450553 10 GAAGCGCACG .......... scaffold4197 ScafM INDEL 0008.scaffold00029 450565 1 C . scaffold4197 Both SNP 0008.scaffold00029 450605 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 450688 2 CT AG - ReadM SNP 0008.scaffold00029 450723 1 A G - Both SNP 0008.scaffold00029 450814 1 T C scaffold4197 Both SNP 0008.scaffold00029 450820 1 A G scaffold4197 ReadM SNP 0008.scaffold00029 450863 1 G A - ReadM INDEL 0008.scaffold00029 450894 1 T . - Both SNP 0008.scaffold00029 451192 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 451433 1 A G - ReadM SNP 0008.scaffold00029 451662 1 G A - ReadM SNP 0008.scaffold00029 451756 1 A G - ReadM SNP 0008.scaffold00029 451814 1 C T - ReadM SNP 0008.scaffold00029 451842 1 G A - ReadM SNP 0008.scaffold00029 451854 1 G A - ReadM SNP 0008.scaffold00029 451999 1 T C - Both SNP 0008.scaffold00029 452027 1 A G scaffold4197 Both SNP 0008.scaffold00029 452146 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 452287 1 A G - ReadM SNP 0008.scaffold00029 452463 1 C T - ReadM SNP 0008.scaffold00029 452476 1 G A - Both SNP 0008.scaffold00029 452612 1 T C scaffold4197 ReadM SNP 0008.scaffold00029 452870 1 A G - ReadM SNP 0008.scaffold00029 453182 1 G A - ReadM SNP 0008.scaffold00029 453312 1 C T - ReadM SNP 0008.scaffold00029 453573 1 A T - ReadM SNP 0008.scaffold00029 453617 1 A C - ReadM SNP 0008.scaffold00029 453809 1 T C - ReadM SNP 0008.scaffold00029 454230 1 A G - ReadM SNP 0008.scaffold00029 454329 1 A T - ReadM SNP 0008.scaffold00029 454420 1 C T - ReadM SNP 0008.scaffold00029 454467 1 A G - ReadM SNP 0008.scaffold00029 454491 1 C A - ReadM SNP 0008.scaffold00029 454532 1 A T - ReadM SNP 0008.scaffold00029 454546 1 T C - ReadM SNP 0008.scaffold00029 454562 1 A T - Both SNP 0008.scaffold00029 455208 1 C A scaffold4197 Both SNP 0008.scaffold00029 455359 1 T G scaffold4197 ReadM SNP 0008.scaffold00029 456568 1 C T - ReadM SNP 0008.scaffold00029 456713 1 G A - ReadM SNP 0008.scaffold00029 457169 1 T G - ReadM SNP 0008.scaffold00029 457225 1 T C - ReadM SNP 0008.scaffold00029 457398 1 C T - ReadM SNP 0008.scaffold00029 457778 1 A G - ReadM SNP 0008.scaffold00029 458087 1 A G - ReadM INDEL 0008.scaffold00029 458162 2 .. AG - ReadM SNP 0008.scaffold00029 458775 1 G C - Both SNP 0008.scaffold00029 459400 1 A G scaffold4197 ScafM SNP 0008.scaffold00029 459441 1 G T scaffold4197 Both SNP 0008.scaffold00029 459579 1 A T scaffold4197 Both SNP 0008.scaffold00029 459740 1 G A scaffold4197 Both SNP 0008.scaffold00029 459751 1 G A scaffold4197 Both SNP 0008.scaffold00029 459797 1 A G scaffold4197 Both SNP 0008.scaffold00029 460329 1 C T scaffold4197 ReadM SNP 0008.scaffold00029 460792 1 A G - ScafM SNP 0008.scaffold00029 462571 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 462582 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 462606 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 462608 1 A G scaffold6151 ReadM SNP 0008.scaffold00029 462612 1 T C - ScafM SNP 0008.scaffold00029 462614 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 462625 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 462633 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 462648 1 G C scaffold6151 ScafM INDEL 0008.scaffold00029 462683 8 ........ TTCATGGG scaffold6151 ScafM INDEL 0008.scaffold00029 462700 9 ......... AAGGTTGTT scaffold6151 ScafM SNP 0008.scaffold00029 462747 1 T G scaffold6151 ScafM SNP 0008.scaffold00029 462761 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 462794 1 T G scaffold6151 ScafM SNP 0008.scaffold00029 462798 1 A C scaffold6151 ScafM SNP 0008.scaffold00029 462845 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 462848 1 C A scaffold6151 ScafM SNP 0008.scaffold00029 462865 1 C G scaffold6151 ScafM SNP 0008.scaffold00029 462894 3 TCA ATG scaffold6151 ScafM SNP 0008.scaffold00029 462907 1 A T scaffold6151 ScafM SNP 0008.scaffold00029 462916 1 C T scaffold6151 ReadM SNP 0008.scaffold00029 462936 1 G T - ScafM INDEL 0008.scaffold00029 462947 1 T . scaffold6151 ScafM SNP 0008.scaffold00029 462958 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463034 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463040 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 463071 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 463169 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463173 1 C T scaffold6151 ScafM INDEL 0008.scaffold00029 463269 1 . G scaffold6151 ScafM SNP 0008.scaffold00029 463301 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 463308 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463337 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 463371 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 463386 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463393 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 463403 2 AT TC scaffold6151 ScafM SNP 0008.scaffold00029 463406 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 463417 1 A G scaffold6151 ReadM SNP 0008.scaffold00029 463438 1 G A - Both SNP 0008.scaffold00029 463444 1 T C scaffold6151 ReadM SNP 0008.scaffold00029 463451 1 C T - ScafM SNP 0008.scaffold00029 463466 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463472 1 C G scaffold6151 ScafM SNP 0008.scaffold00029 463478 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463525 1 G C scaffold6151 ScafM SNP 0008.scaffold00029 463527 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 463540 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 463549 1 C G scaffold6151 ScafM SNP 0008.scaffold00029 463560 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463565 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463567 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463580 1 T A scaffold6151 ScafM INDEL 0008.scaffold00029 463582 1 . A scaffold6151 ScafM SNP 0008.scaffold00029 463589 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 463599 1 T A scaffold6151 ScafM INDEL 0008.scaffold00029 463628 1 T . scaffold6151 ScafM INDEL 0008.scaffold00029 463630 9 AGAGAAGAA ......... scaffold6151 ScafM INDEL 0008.scaffold00029 463645 5 AAAGA ..... scaffold6151 ScafM SNP 0008.scaffold00029 463653 1 C T scaffold6151 Both SNP 0008.scaffold00029 463678 1 A G scaffold6151 Both SNP 0008.scaffold00029 463686 1 C A scaffold6151 ScafM SNP 0008.scaffold00029 463705 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463710 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 463723 1 G T scaffold6151 ScafM INDEL 0008.scaffold00029 463748 8 ........ TTTAAATT scaffold6151 ScafM SNP 0008.scaffold00029 463751 1 C A scaffold6151 ScafM INDEL 0008.scaffold00029 463822 1 . A scaffold6151 ScafM INDEL 0008.scaffold00029 463824 2 .. AA scaffold6151 ScafM SNP 0008.scaffold00029 463865 1 C G scaffold6151 ScafM INDEL 0008.scaffold00029 463882 11 ATGTGGTGTTT ........... scaffold6151 ScafM SNP 0008.scaffold00029 463894 1 T A scaffold6151 ScafM INDEL 0008.scaffold00029 463897 3 ATA ... scaffold6151 ScafM SNP 0008.scaffold00029 463913 1 A T scaffold6151 ScafM SNP 0008.scaffold00029 463943 1 T A scaffold6151 ScafM INDEL 0008.scaffold00029 463946 2 AA .. scaffold6151 ScafM SNP 0008.scaffold00029 463950 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 463952 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 463955 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 463998 1 T C scaffold6151 ScafM INDEL 0008.scaffold00029 464003 6 GGAGGC ...... scaffold6151 Both SNP 0008.scaffold00029 464036 1 A C scaffold6151 ScafM SNP 0008.scaffold00029 464041 1 T A scaffold6151 ReadM SNP 0008.scaffold00029 464048 1 A G - ScafM SNP 0008.scaffold00029 464062 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 464075 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 464097 1 G A scaffold6151 ScafM SNP 0008.scaffold00029 464102 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 464107 1 A C scaffold6151 ScafM SNP 0008.scaffold00029 464119 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 464121 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 464131 1 T G scaffold6151 ScafM INDEL 0008.scaffold00029 464142 12 ACTGGTTATTGT ............ scaffold6151 ScafM INDEL 0008.scaffold00029 464159 5 ATGTT ..... scaffold6151 ScafM INDEL 0008.scaffold00029 464165 4 TGAT .... scaffold6151 ScafM INDEL 0008.scaffold00029 464171 2 AC .. scaffold6151 ScafM INDEL 0008.scaffold00029 464174 1 G . scaffold6151 ScafM INDEL 0008.scaffold00029 464192 5 GAGGA ..... scaffold6151 ScafM SNP 0008.scaffold00029 464209 1 T A scaffold6151 ScafM SNP 0008.scaffold00029 464218 1 C A scaffold6151 Both SNP 0008.scaffold00029 464220 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 464227 1 G C scaffold6151 ReadM INDEL 0008.scaffold00029 464291 2 .. GT - ReadM SNP 0008.scaffold00029 464438 1 T A - ScafM SNP 0008.scaffold00029 464563 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 464571 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 464610 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 464622 1 A T scaffold6151 ScafM SNP 0008.scaffold00029 464640 1 T C scaffold6151 ScafM SNP 0008.scaffold00029 464657 1 A T scaffold6151 ScafM SNP 0008.scaffold00029 464662 1 T A scaffold6151 ScafM INDEL 0008.scaffold00029 464668 2 .. CC scaffold6151 ScafM SNP 0008.scaffold00029 464670 2 CC AT scaffold6151 ScafM SNP 0008.scaffold00029 464674 1 T C scaffold6151 ScafM INDEL 0008.scaffold00029 464689 4 CAAC .... scaffold6151 ScafM INDEL 0008.scaffold00029 464699 6 GAAATC ...... scaffold6151 ScafM INDEL 0008.scaffold00029 464707 3 TTT ... scaffold6151 ScafM SNP 0008.scaffold00029 464721 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 464773 1 A G scaffold6151 ScafM SNP 0008.scaffold00029 464801 1 A T scaffold6151 ScafM SNP 0008.scaffold00029 464809 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 464856 1 C A scaffold6151 ScafM SNP 0008.scaffold00029 464858 1 T C scaffold6151 ReadM SNP 0008.scaffold00029 464877 1 G T - ScafM SNP 0008.scaffold00029 464892 1 G T scaffold6151 ScafM SNP 0008.scaffold00029 464901 2 CG AA scaffold6151 ScafM INDEL 0008.scaffold00029 464922 1 C . scaffold6151 ScafM SNP 0008.scaffold00029 464928 1 C T scaffold6151 ScafM SNP 0008.scaffold00029 464954 1 A T scaffold6151 ReadM SNP 0008.scaffold00029 465123 1 T A - ReadM SNP 0008.scaffold00029 465442 1 A G - ReadM SNP 0008.scaffold00029 465530 1 T C - ReadM SNP 0008.scaffold00029 465592 1 C A - Both SNP 0008.scaffold00029 465745 1 C G scaffold4197 ScafM SNP 0008.scaffold00029 465790 1 G C scaffold4197 ScafM INDEL 0008.scaffold00029 465829 43 ATGGCGATTTCATTTGGGGATGTAATATTTGTCGTGCCCAACC ........................................... scaffold4197 ScafM INDEL 0008.scaffold00029 465875 11 GACCAAATGAG ........... scaffold4197 ScafM INDEL 0008.scaffold00029 465889 6 CTTCAC ...... scaffold4197 ScafM INDEL 0008.scaffold00029 465899 10 TATTACTAAT .......... scaffold4197 ScafM INDEL 0008.scaffold00029 465912 16 TTCTTACTTATTGTGT ................ scaffold4197 ScafM SNP 0008.scaffold00029 465950 1 T A scaffold4197 ReadM SNP 0008.scaffold00029 466776 1 T G - ReadM INDEL 0008.scaffold00029 466982 1 A . - ReadM SNP 0008.scaffold00029 467010 1 G C - ReadM INDEL 0008.scaffold00029 467125 1 . A - ReadM SNP 0008.scaffold00029 467612 1 C T - ReadM SNP 0008.scaffold00029 467780 1 C T - ReadM SNP 0008.scaffold00029 468358 1 C T - ReadM SNP 0008.scaffold00029 468632 1 G A - ReadM SNP 0008.scaffold00029 468872 1 C T - ReadM SNP 0008.scaffold00029 469535 1 A G - ReadM SNP 0008.scaffold00029 469617 1 T C - ReadM SNP 0008.scaffold00029 469755 1 T C - ReadM SNP 0008.scaffold00029 470066 1 A T - ReadM SNP 0008.scaffold00029 470228 1 C G - ReadM SNP 0008.scaffold00029 470745 1 T C - ReadM SNP 0008.scaffold00029 470751 1 A G - ReadM SNP 0008.scaffold00029 470825 1 C T - ReadM SNP 0008.scaffold00029 470936 1 C T - ReadM SNP 0008.scaffold00029 471077 1 C T - ReadM SNP 0008.scaffold00029 471241 1 G C - ReadM SNP 0008.scaffold00029 471791 1 A T - ReadM INDEL 0008.scaffold00029 472094 1 A . - ReadM SNP 0008.scaffold00029 472213 1 T C - ReadM SNP 0008.scaffold00029 472668 1 C T - ReadM SNP 0008.scaffold00029 472859 1 A G - ReadM INDEL 0008.scaffold00029 473636 1 . T - ReadM SNP 0008.scaffold00029 473767 1 C A - ReadM SNP 0008.scaffold00029 473814 1 T C - Both SNP 0008.scaffold00029 474180 1 A T scaffold13842 Both SNP 0008.scaffold00029 474251 1 T C scaffold13842 Both SNP 0008.scaffold00029 474475 1 A G scaffold13842 ScafM SNP 0008.scaffold00029 475061 1 C T scaffold13842 Both SNP 0008.scaffold00029 476131 1 T C scaffold13842 Both SNP 0008.scaffold00029 476231 1 A C scaffold13842 Both SNP 0008.scaffold00029 476456 1 A G scaffold13842 ReadM SNP 0008.scaffold00029 476892 1 C T - ReadM SNP 0008.scaffold00029 477103 1 A C - Both INDEL 0008.scaffold00029 477610 1 . A scaffold13842 ScafM SNP 0008.scaffold00029 480235 1 T C scaffold9300 ScafM SNP 0008.scaffold00029 480239 1 G A scaffold9300 ScafM SNP 0008.scaffold00029 480250 1 T A scaffold9300 ReadM SNP 0008.scaffold00029 480420 1 T C - ReadM SNP 0008.scaffold00029 481881 1 C T - ReadM SNP 0008.scaffold00029 483191 1 T C - ReadM SNP 0008.scaffold00029 483216 1 C A - ReadM SNP 0008.scaffold00029 483954 1 C A - ReadM SNP 0008.scaffold00029 483997 1 G A - ReadM SNP 0008.scaffold00029 484658 1 G A - ScafM SNP 0008.scaffold00029 487927 1 T C scaffold33 Both SNP 0008.scaffold00029 488443 1 G A scaffold33 Both SNP 0008.scaffold00029 488448 1 C T scaffold33 Both SNP 0008.scaffold00029 488560 1 A G scaffold33 ScafM SNP 0008.scaffold00029 488779 1 A T scaffold33 Both SNP 0008.scaffold00029 488984 1 T A scaffold33 Both SNP 0008.scaffold00029 489035 1 T C scaffold33 Both SNP 0008.scaffold00029 489418 1 C T scaffold33 Both SNP 0008.scaffold00029 489467 1 T G scaffold33 Both SNP 0008.scaffold00029 489623 1 T C scaffold33 ScafM SNP 0008.scaffold00029 490052 1 G A scaffold33 ScafM SNP 0008.scaffold00029 490327 1 G A scaffold33 Both SNP 0008.scaffold00029 491221 1 T C scaffold33 Both SNP 0008.scaffold00029 491339 1 C T scaffold33 Both INDEL 0008.scaffold00029 491417 2 .. TC scaffold33 Both SNP 0008.scaffold00029 491431 1 C T scaffold33 Both SNP 0008.scaffold00029 491612 1 T C scaffold33 Both INDEL 0008.scaffold00029 491654 2 .. CT scaffold33 ScafM SNP 0008.scaffold00029 491913 1 A C scaffold33 ScafM SNP 0008.scaffold00029 491916 1 A G scaffold33 Both SNP 0008.scaffold00029 491923 1 A C scaffold33 Both SNP 0008.scaffold00029 491949 1 A G scaffold33 Both SNP 0008.scaffold00029 491994 1 A C scaffold33 ScafM SNP 0008.scaffold00029 492082 1 T G scaffold33 ScafM SNP 0008.scaffold00029 492084 1 G A scaffold33 Both SNP 0008.scaffold00029 492166 1 A T scaffold33 ScafM SNP 0008.scaffold00029 492192 1 A T scaffold33 Both SNP 0008.scaffold00029 492196 1 T G scaffold33 Both SNP 0008.scaffold00029 492422 1 T C scaffold33 Both SNP 0008.scaffold00029 492426 1 G T scaffold33 Both INDEL 0008.scaffold00029 492472 1 T . scaffold33 Both SNP 0008.scaffold00029 492509 1 A G scaffold33 ScafM INDEL 0008.scaffold00029 492612 1 . A scaffold33 Both SNP 0008.scaffold00029 492710 1 A T scaffold33 ScafM SNP 0008.scaffold00029 492721 1 G C scaffold33 ScafM SNP 0008.scaffold00029 492733 1 A G scaffold33 Both SNP 0008.scaffold00029 492841 1 T C scaffold33 Both SNP 0008.scaffold00029 492961 1 A G scaffold33 ScafM SNP 0008.scaffold00029 493081 1 T A scaffold33 ScafM INDEL 0008.scaffold00029 493089 3 ... CAA scaffold33 ScafM INDEL 0008.scaffold00029 493345 4 .... TTTT scaffold33 Both SNP 0008.scaffold00029 493901 1 T G scaffold33 ScafM SNP 0008.scaffold00029 493912 1 C A scaffold33 ScafM SNP 0008.scaffold00029 493919 1 A C scaffold33 ScafM SNP 0008.scaffold00029 493963 1 A T scaffold33 ScafM SNP 0008.scaffold00029 493966 1 T C scaffold33 Both SNP 0008.scaffold00029 494038 1 A G scaffold33 Both SNP 0008.scaffold00029 494361 1 A G scaffold33 Both SNP 0008.scaffold00029 494454 1 G C scaffold33 Both SNP 0008.scaffold00029 494460 1 T G scaffold33 Both SNP 0008.scaffold00029 495308 1 A C scaffold33 Both SNP 0008.scaffold00029 495665 1 A G scaffold33 ReadM INDEL 0008.scaffold00029 496308 1 A . - ReadM SNP 0008.scaffold00029 496331 1 G A - ReadM INDEL 0008.scaffold00029 496392 2 TT .. - ReadM SNP 0008.scaffold00029 496494 1 C T - ReadM SNP 0008.scaffold00029 496603 1 C T - ReadM SNP 0008.scaffold00029 496645 1 T G - ReadM INDEL 0008.scaffold00029 496748 1 A . - Both SNP 0008.scaffold00029 496833 1 G C scaffold33 Both SNP 0008.scaffold00029 496861 1 G A scaffold33 Both SNP 0008.scaffold00029 496950 1 C T scaffold33 Both SNP 0008.scaffold00029 496977 1 T C scaffold33 Both SNP 0008.scaffold00029 497014 1 A G scaffold33 Both SNP 0008.scaffold00029 497066 1 G C scaffold33 Both SNP 0008.scaffold00029 497070 1 G A scaffold33 Both SNP 0008.scaffold00029 497139 1 A C scaffold33 Both SNP 0008.scaffold00029 497189 1 A G scaffold33 ScafM INDEL 0008.scaffold00029 497222 3 TTT ... scaffold33 ScafM SNP 0008.scaffold00029 497236 1 T C scaffold33 ScafM INDEL 0008.scaffold00029 497256 2 AT .. scaffold33 ScafM INDEL 0008.scaffold00029 497266 1 . A scaffold33 ScafM INDEL 0008.scaffold00029 497272 1 . T scaffold33 Both INDEL 0008.scaffold00029 497286 1 . A scaffold33 Both SNP 0008.scaffold00029 497458 1 A G scaffold33 Both SNP 0008.scaffold00029 497572 1 T C scaffold33 ScafM SNP 0008.scaffold00029 497646 1 C T scaffold33 Both SNP 0008.scaffold00029 497719 1 C G scaffold33 Both SNP 0008.scaffold00029 497880 1 T C scaffold33 Both SNP 0008.scaffold00029 497915 1 G A scaffold33 Both INDEL 0008.scaffold00029 497967 3 ... CTT scaffold33 ReadM INDEL 0008.scaffold00029 497968 3 ... TTT - Both SNP 0008.scaffold00029 498053 1 C T scaffold33 Both SNP 0008.scaffold00029 498222 1 G A scaffold33 Both SNP 0008.scaffold00029 498449 1 T G scaffold33 Both SNP 0008.scaffold00029 498525 1 A G scaffold33 Both SNP 0008.scaffold00029 498527 1 A G scaffold33 Both SNP 0008.scaffold00029 498561 1 G T scaffold33 Both SNP 0008.scaffold00029 498581 1 C T scaffold33 Both SNP 0008.scaffold00029 498605 1 T C scaffold33 ScafM SNP 0008.scaffold00029 498683 1 A T scaffold33 ScafM SNP 0008.scaffold00029 498738 2 AA TG scaffold33 Both SNP 0008.scaffold00029 499045 1 C G scaffold33 Both SNP 0008.scaffold00029 499091 1 T A scaffold33 Both SNP 0008.scaffold00029 499111 1 C G scaffold33 ScafM SNP 0008.scaffold00029 499146 1 C T scaffold33 ScafM SNP 0008.scaffold00029 499204 1 A C scaffold33 ScafM SNP 0008.scaffold00029 499216 1 T C scaffold33 ScafM SNP 0008.scaffold00029 499219 1 G T scaffold33 ScafM INDEL 0008.scaffold00029 499264 10 GCGAAGAAGA .......... scaffold33 ScafM SNP 0008.scaffold00029 499320 1 T G scaffold33 ScafM INDEL 0008.scaffold00029 499355 30 ATTTTTTTTAGAATCAGAAAAAGGAAGGAG .............................. scaffold33 ScafM SNP 0008.scaffold00029 499396 1 C T scaffold33 ScafM INDEL 0008.scaffold00029 499419 2 .. GG scaffold33 ScafM INDEL 0008.scaffold00029 499430 1 G . scaffold33 ScafM SNP 0008.scaffold00029 499457 1 C G scaffold33 ScafM SNP 0008.scaffold00029 499462 1 A G scaffold33 ScafM SNP 0008.scaffold00029 499487 1 T C scaffold33 ScafM SNP 0008.scaffold00029 499489 1 C G scaffold33 ScafM SNP 0008.scaffold00029 499499 1 G A scaffold33 ScafM INDEL 0008.scaffold00029 499540 1 G . scaffold33 ScafM SNP 0008.scaffold00029 499568 1 G T scaffold33 ScafM SNP 0008.scaffold00029 499892 2 CG AA scaffold1158 ScafM SNP 0008.scaffold00029 499900 1 A C scaffold1158 ScafM SNP 0008.scaffold00029 499931 1 C T scaffold1158 ScafM SNP 0008.scaffold00029 499935 1 C T scaffold1158 ScafM SNP 0008.scaffold00029 499958 1 T A scaffold1158 ScafM SNP 0008.scaffold00029 499961 1 G C scaffold1158 ScafM SNP 0008.scaffold00029 499999 1 G T scaffold1158 ScafM SNP 0008.scaffold00029 500002 1 G A scaffold1158 ScafM SNP 0008.scaffold00029 500011 1 T A scaffold1158 ScafM INDEL 0008.scaffold00029 500015 1 . T scaffold1158 ScafM SNP 0008.scaffold00029 500020 1 G A scaffold1158 ScafM SNP 0008.scaffold00029 500023 1 C T scaffold1158 ScafM SNP 0008.scaffold00029 500030 1 T G scaffold1158 ScafM SNP 0008.scaffold00029 500041 1 G A scaffold1158 ScafM SNP 0008.scaffold00029 500048 1 C T scaffold1158 ScafM SNP 0008.scaffold00029 500075 1 A G scaffold1158 ScafM SNP 0008.scaffold00029 500105 1 C G scaffold1158 ScafM SNP 0008.scaffold00029 500107 1 T G scaffold1158 ScafM SNP 0008.scaffold00029 500115 1 A G scaffold1158 ScafM SNP 0008.scaffold00029 500127 1 A C scaffold1158 ScafM SNP 0008.scaffold00029 500751 1 T G scaffold33 ScafM SNP 0008.scaffold00029 500762 1 G T scaffold33 ScafM SNP 0008.scaffold00029 500862 1 C T scaffold33 ScafM SNP 0008.scaffold00029 500868 1 T C scaffold33 ScafM SNP 0008.scaffold00029 501129 1 T C scaffold33 ScafM SNP 0008.scaffold00029 501177 1 T A scaffold33 Both SNP 0008.scaffold00029 501231 1 T A scaffold33 Both SNP 0008.scaffold00029 501247 1 T C scaffold33 Both SNP 0008.scaffold00029 501306 1 A G scaffold33 Both SNP 0008.scaffold00029 501414 1 A G scaffold33 Both SNP 0008.scaffold00029 501553 1 G C scaffold33 ReadM SNP 0008.scaffold00029 501576 1 C G - Both SNP 0008.scaffold00029 501741 1 A T scaffold33 ScafM SNP 0008.scaffold00029 501804 1 A T scaffold33 Both SNP 0008.scaffold00029 501839 1 C T scaffold33 Both SNP 0008.scaffold00029 501939 1 T C scaffold33 ReadM SNP 0008.scaffold00029 501973 1 T C - ReadM SNP 0008.scaffold00029 502072 1 A G - Both SNP 0008.scaffold00029 502170 1 C G scaffold33 Both SNP 0008.scaffold00029 502180 1 T A scaffold33 ScafM SNP 0008.scaffold00029 502394 1 G A scaffold33 Both SNP 0008.scaffold00029 502434 1 A C scaffold33 ScafM SNP 0008.scaffold00029 502453 1 T C scaffold33 ScafM SNP 0008.scaffold00029 502471 1 T C scaffold33 ScafM SNP 0008.scaffold00029 502532 1 G A scaffold33 ScafM SNP 0008.scaffold00029 502569 1 G T scaffold33 ReadM SNP 0008.scaffold00029 504516 1 T A - ReadM SNP 0008.scaffold00029 504542 1 T A - ReadM SNP 0008.scaffold00029 504558 1 C T - ReadM SNP 0008.scaffold00029 504606 1 A T - ReadM SNP 0008.scaffold00029 504663 1 T C - ReadM SNP 0008.scaffold00029 504772 1 T G - ReadM SNP 0008.scaffold00029 504815 1 G T - ReadM SNP 0008.scaffold00029 504932 1 C T - ReadM SNP 0008.scaffold00029 505068 1 A C - ReadM SNP 0008.scaffold00029 505310 1 T C - ReadM SNP 0008.scaffold00029 505372 1 A G - Both SNP 0008.scaffold00029 505420 1 T G scaffold33 ScafM INDEL 0008.scaffold00029 505466 28 TTAAGTTTTACCAAAAAAAAAAGGTGAA ............................ scaffold33 ScafM SNP 0008.scaffold00029 505505 1 G T scaffold33 ScafM SNP 0008.scaffold00029 505508 1 C T scaffold33 Both SNP 0008.scaffold00029 505541 1 T C scaffold33 Both SNP 0008.scaffold00029 505586 1 C A scaffold33 Both SNP 0008.scaffold00029 505614 1 G T scaffold33 Both SNP 0008.scaffold00029 505688 1 G A scaffold33 Both SNP 0008.scaffold00029 505727 1 T A scaffold33 Both SNP 0008.scaffold00029 505916 1 C T scaffold33 Both SNP 0008.scaffold00029 505956 1 G T scaffold33 ScafM SNP 0008.scaffold00029 505990 1 C A scaffold33 ScafM SNP 0008.scaffold00029 505996 2 AG GC scaffold33 ScafM SNP 0008.scaffold00029 506011 1 C T scaffold33 Both SNP 0008.scaffold00029 506039 1 G A scaffold33 Both SNP 0008.scaffold00029 506097 1 A G scaffold33 Both SNP 0008.scaffold00029 506260 1 A G scaffold33 Both INDEL 0008.scaffold00029 506380 2 .. AT scaffold33 Both INDEL 0008.scaffold00029 506467 1 . C scaffold33 Both SNP 0008.scaffold00029 506495 1 A T scaffold33 Both SNP 0008.scaffold00029 506512 1 G A scaffold33 Both SNP 0008.scaffold00029 506570 1 C T scaffold33 Both INDEL 0008.scaffold00029 506582 1 . A scaffold33 ScafM SNP 0008.scaffold00029 506904 1 T G scaffold33 ScafM INDEL 0008.scaffold00029 506954 8 ........ TCAAGACT scaffold33 ScafM SNP 0008.scaffold00029 507023 1 T C scaffold33 ScafM INDEL 0008.scaffold00029 507067 40 CCTTTTCTCTAAGTTGAGAGTTGAGACCCACACCCAGGAA ........................................ scaffold33 ScafM INDEL 0008.scaffold00029 507110 9 CCCCCCCCC ......... scaffold33 ScafM INDEL 0008.scaffold00029 507206 2 TA .. scaffold33 ScafM SNP 0008.scaffold00029 507285 1 T A scaffold33 ScafM SNP 0008.scaffold00029 507323 1 A T scaffold33 ScafM SNP 0008.scaffold00029 507373 1 C T scaffold33 ScafM INDEL 0008.scaffold00029 507512 4 ATTA .... scaffold33 ScafM INDEL 0008.scaffold00029 507552 2 .. TC scaffold33 Both SNP 0008.scaffold00029 507839 1 G A scaffold33 Both SNP 0008.scaffold00029 507848 1 G A scaffold33 Both SNP 0008.scaffold00029 507880 1 T G scaffold33 Both SNP 0008.scaffold00029 507885 1 C T scaffold33 Both SNP 0008.scaffold00029 507927 1 C G scaffold33 ReadM SNP 0008.scaffold00029 508098 1 A C - ReadM SNP 0008.scaffold00029 508236 1 G A - ReadM INDEL 0008.scaffold00029 508276 1 . T - ReadM SNP 0008.scaffold00029 508310 1 T A - ScafM SNP 0008.scaffold00029 508362 1 C T scaffold33 Both INDEL 0008.scaffold00029 508384 1 A . scaffold33 Both SNP 0008.scaffold00029 508410 1 G A scaffold33 ScafM SNP 0008.scaffold00029 508568 1 C T scaffold33 ScafM INDEL 0008.scaffold00029 508583 2 GG .. scaffold33 ScafM SNP 0008.scaffold00029 508586 1 G A scaffold33 ScafM SNP 0008.scaffold00029 508594 1 G A scaffold33 ScafM SNP 0008.scaffold00029 508603 1 G A scaffold33 ScafM SNP 0008.scaffold00029 508607 1 A G scaffold33 ScafM SNP 0008.scaffold00029 508654 1 G A scaffold33 ScafM INDEL 0008.scaffold00029 508657 1 G . scaffold33 ScafM SNP 0008.scaffold00029 508668 1 T C scaffold33 Both INDEL 0008.scaffold00029 508680 1 . G scaffold33 Both SNP 0008.scaffold00029 508800 1 C A scaffold33 Both SNP 0008.scaffold00029 508808 1 G T scaffold33 Both SNP 0008.scaffold00029 508843 1 A T scaffold33 Both INDEL 0008.scaffold00029 508970 1 .