Download

 Name                            Size  Description
 BeetSet-3.genes.2505.aa          14M  Protein sequences
 BeetSet-3.genes.2505.cds         38M  CDS sequences
 BeetSet-3.genes.2505.functional  19M  Functional annotation
 BeetSet-3.genes.2505.mrna        48M  Transcript sequences (incl. UTR)
 BeetSet-3.genes.2505.sort.gff    91M  Positions of coding genes
 README.txt                      940   README
 RefBeet-3.0.fa.gz               152M  Genome sequence
 RefBeet-3.0.masked.fa.gz         62M  Masked genome sequence
 RefBeet-3.0.ncRNA.annotation    1.5M  
 RefBeet-3.0.tRNA.annotation      68K  
 RefBeet-3.0.tRNA.structures     407K

Data sets available for RefBeet-3.0
===================================

Assembly
--------
- RefBeet-3.0.fa: The genome assembly of reference genotype KWS2320 (Beta 
vulgaris ssp. vulgaris) based on PacBio data and integrated with isogenic
Nanopore data, genetic and physical maps, optical maps, and GBS data
- RefBeet-3.0.masked.fa: Masked genome assembly, repeats determined by 
RepeatModeler based on RefBeet-3.0, masked by RepeatMasker

Protein coding genes
--------------------
- *.genes.2505.cds.fa: CDS of predicted gene models supported by evidence
- *.genes.2505.mrna.fa: mRNA sequences of these genes
- *.genes.2505.aa.fa: Translated protein sequences of these genes
- *.genes.2505.functional: Functional annotation

Non-coding RNAs
---------------------
- *.ncRNA.annotation: Annotation of non-coding RNAs (all types)
- *.tRNA.annotation: Specific annotation of tRNAs
- *.tRNA.structures: Predicted secondary structure of tRNAs