Data sets available for Spinach-1.0 =================================== Assembly -------- - Spinach-1.0.1.fna: 2229 sequences mainly from Agrobacterium contamination excluded or trimmed - Spinach-1.0.fna: Genome assembly of Illumina sequencing data of genotype Viroflay (Spinacia oleracea) using the SOAPdenovo software Protein coding genes -------------------- - *.genes.1408.cds.fa: CDS of predicted gene models supported by mRNA evidence - *.genes.1408.mrna.fa: mRNA sequences of these genes - *.genes.1408.pep.fa: Translated protein sequences of these genes - *.unfiltered_genes.1408.gff3: Positions of all protein coding genes predicted including genes which are not supported by mRNA evidence Augustus hints and anchors -------------------------- - Augustus-hints-anchors.Spinach-1.0.1.gff.gz: Gene models were calculated using these repeat hints, mRNA-seq hints and anchors.