Method VarType Scaf Position VarLen Reference Varient SOAPScaf ScafM INDEL 0001.scaffold00002 29 2 AA .. scaffold18940 ScafM SNP 0001.scaffold00002 126 2 TA AT scaffold18940 ScafM INDEL 0001.scaffold00002 136 1 . G scaffold18940 ScafM SNP 0001.scaffold00002 179 3 CAA ATT scaffold18940 ScafM INDEL 0001.scaffold00002 203 1 T . scaffold18940 ScafM SNP 0001.scaffold00002 215 1 T C scaffold18940 ScafM SNP 0001.scaffold00002 253 1 C A scaffold18940 ScafM INDEL 0001.scaffold00002 278 1 A . scaffold18940 ScafM INDEL 0001.scaffold00002 345 2 .A GG scaffold18940 ReadM SNP 0001.scaffold00002 1762 1 C T - ReadM SNP 0001.scaffold00002 2813 1 T A - Both SNP 0001.scaffold00002 2955 1 T G scaffold15381 Both SNP 0001.scaffold00002 2976 1 A G scaffold15381 Both SNP 0001.scaffold00002 3073 1 T C scaffold15381 ReadM SNP 0001.scaffold00002 3498 1 C T - ReadM SNP 0001.scaffold00002 3523 1 C A - ReadM SNP 0001.scaffold00002 3646 1 C T - ReadM SNP 0001.scaffold00002 3862 1 T C - ReadM SNP 0001.scaffold00002 3896 1 C G - ReadM SNP 0001.scaffold00002 4070 1 T A - ReadM INDEL 0001.scaffold00002 4098 1 A . - ReadM SNP 0001.scaffold00002 4425 1 A T - Both INDEL 0001.scaffold00002 4773 1 A . scaffold15381 ScafM SNP 0001.scaffold00002 5380 1 C T scaffold15381 Both SNP 0001.scaffold00002 5918 1 C T scaffold15381 Both SNP 0001.scaffold00002 5995 1 T C scaffold15381 Both SNP 0001.scaffold00002 6081 1 C T scaffold15381 Both INDEL 0001.scaffold00002 6118 1 . T scaffold15381 Both SNP 0001.scaffold00002 6174 1 C T scaffold15381 ReadM SNP 0001.scaffold00002 6586 1 T C - ReadM SNP 0001.scaffold00002 6599 1 A C - ReadM SNP 0001.scaffold00002 6668 1 T C - ReadM SNP 0001.scaffold00002 6716 1 G T - ReadM SNP 0001.scaffold00002 7191 1 G A - ReadM SNP 0001.scaffold00002 8692 1 C T - ReadM SNP 0001.scaffold00002 9172 1 A G - ReadM SNP 0001.scaffold00002 10347 1 G T - ReadM SNP 0001.scaffold00002 10365 1 A C - ReadM SNP 0001.scaffold00002 11882 1 T C - ReadM SNP 0001.scaffold00002 11891 1 C G - Both SNP 0001.scaffold00002 12073 1 A G scaffold11732 Both SNP 0001.scaffold00002 12096 1 A G scaffold11732 Both SNP 0001.scaffold00002 12216 1 A G scaffold11732 Both SNP 0001.scaffold00002 12224 1 G T scaffold11732 Both SNP 0001.scaffold00002 12288 1 G T scaffold11732 Both INDEL 0001.scaffold00002 12485 1 A . scaffold11732 Both SNP 0001.scaffold00002 12524 1 C T scaffold11732 Both SNP 0001.scaffold00002 12590 1 A G scaffold11732 Both SNP 0001.scaffold00002 12722 1 T C scaffold11732 ScafM SNP 0001.scaffold00002 12747 1 A G scaffold11732 Both INDEL 0001.scaffold00002 12852 1 T . scaffold11732 Both SNP 0001.scaffold00002 12926 1 T C scaffold11732 Both SNP 0001.scaffold00002 12931 1 A G scaffold11732 ReadM SNP 0001.scaffold00002 12994 1 A G - ReadM SNP 0001.scaffold00002 13206 1 C A - ReadM SNP 0001.scaffold00002 13527 1 C T - ReadM SNP 0001.scaffold00002 13540 1 A G - ReadM SNP 0001.scaffold00002 14069 1 A G - Both SNP 0001.scaffold00002 14148 1 G A scaffold11732 Both SNP 0001.scaffold00002 14183 1 G A scaffold11732 Both SNP 0001.scaffold00002 14215 1 C T scaffold11732 Both SNP 0001.scaffold00002 14277 1 A C scaffold11732 Both SNP 0001.scaffold00002 14340 1 G A scaffold11732 ScafM SNP 0001.scaffold00002 14409 1 T C scaffold11732 ScafM INDEL 0001.scaffold00002 14415 3 ... CTT scaffold11732 ScafM INDEL 0001.scaffold00002 14418 2 .. TT scaffold11732 Both SNP 0001.scaffold00002 14437 1 C G scaffold11732 ScafM SNP 0001.scaffold00002 14522 1 C T scaffold11732 ScafM INDEL 0001.scaffold00002 14530 4 .... ATGC scaffold11732 ReadM INDEL 0001.scaffold00002 14612 2 .. TA - ReadM INDEL 0001.scaffold00002 14743 1 . A - ReadM SNP 0001.scaffold00002 14920 1 G A - ReadM SNP 0001.scaffold00002 15011 1 G C - ReadM SNP 0001.scaffold00002 15044 1 A G - ReadM SNP 0001.scaffold00002 15155 1 A G - ScafM SNP 0001.scaffold00002 15472 1 G C scaffold11732 ScafM SNP 0001.scaffold00002 15579 1 T G scaffold11732 ScafM SNP 0001.scaffold00002 15624 1 A G scaffold11732 ScafM SNP 0001.scaffold00002 15658 1 G A scaffold11732 ScafM SNP 0001.scaffold00002 15684 1 G A scaffold11732 ScafM SNP 0001.scaffold00002 15954 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 15957 2 AA .. scaffold794 ScafM INDEL 0001.scaffold00002 16139 1 A . scaffold794 Both SNP 0001.scaffold00002 16262 1 C T scaffold794 ReadM SNP 0001.scaffold00002 16430 1 C T - ReadM SNP 0001.scaffold00002 16541 1 G T - Both INDEL 0001.scaffold00002 16548 2 AT .. scaffold794 ReadM INDEL 0001.scaffold00002 16600 2 TT .. - ReadM SNP 0001.scaffold00002 16693 1 A C - ReadM SNP 0001.scaffold00002 16735 1 G A - ReadM SNP 0001.scaffold00002 16878 1 G A - ReadM SNP 0001.scaffold00002 16887 1 A G - ScafM SNP 0001.scaffold00002 17323 1 A T scaffold794 Both SNP 0001.scaffold00002 17330 1 C G scaffold794 ScafM SNP 0001.scaffold00002 17446 1 A G scaffold794 ScafM SNP 0001.scaffold00002 17467 1 T C scaffold794 ScafM SNP 0001.scaffold00002 17472 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 17724 1 A . scaffold794 ReadM SNP 0001.scaffold00002 17856 1 G A - ScafM SNP 0001.scaffold00002 18043 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 18146 2 AT .. scaffold794 ScafM SNP 0001.scaffold00002 18168 1 G A scaffold794 ScafM SNP 0001.scaffold00002 18287 1 T C scaffold794 ScafM SNP 0001.scaffold00002 18333 1 A C scaffold794 ScafM SNP 0001.scaffold00002 18473 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 18507 1 A . scaffold794 ScafM SNP 0001.scaffold00002 18981 2 TA AT scaffold794 ScafM SNP 0001.scaffold00002 18996 1 T A scaffold794 ScafM SNP 0001.scaffold00002 19038 1 C G scaffold794 Both SNP 0001.scaffold00002 19092 1 T A scaffold794 Both SNP 0001.scaffold00002 19151 1 G A scaffold794 Both SNP 0001.scaffold00002 19236 1 G C scaffold794 Both SNP 0001.scaffold00002 19363 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 19396 4 .... CGAT scaffold794 ScafM SNP 0001.scaffold00002 19455 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 19482 1 . G scaffold794 ScafM INDEL 0001.scaffold00002 19489 1 . T scaffold794 ScafM SNP 0001.scaffold00002 19578 1 A C scaffold794 ScafM SNP 0001.scaffold00002 19581 1 T C scaffold794 ScafM SNP 0001.scaffold00002 19583 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 19589 1 . A scaffold794 ScafM SNP 0001.scaffold00002 19595 1 T A scaffold794 Both SNP 0001.scaffold00002 19689 1 T C scaffold794 Both SNP 0001.scaffold00002 19728 1 A G scaffold794 ScafM SNP 0001.scaffold00002 19833 1 C T scaffold794 ScafM SNP 0001.scaffold00002 19845 1 C T scaffold794 ScafM SNP 0001.scaffold00002 19849 1 C T scaffold794 ScafM SNP 0001.scaffold00002 19851 1 T C scaffold794 Both SNP 0001.scaffold00002 19939 1 A T scaffold794 Both SNP 0001.scaffold00002 19953 1 T A scaffold794 Both SNP 0001.scaffold00002 20028 1 G A scaffold794 Both SNP 0001.scaffold00002 20187 1 G A scaffold794 Both SNP 0001.scaffold00002 20305 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 20319 1 . C scaffold794 ScafM SNP 0001.scaffold00002 20323 1 G T scaffold794 ScafM SNP 0001.scaffold00002 20350 1 A T scaffold794 Both SNP 0001.scaffold00002 20388 1 T C scaffold794 Both INDEL 0001.scaffold00002 20421 1 A . scaffold794 Both INDEL 0001.scaffold00002 20518 1 A . scaffold794 ScafM SNP 0001.scaffold00002 20543 1 A G scaffold794 ScafM SNP 0001.scaffold00002 20552 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 20555 4 ATAA .... scaffold794 ScafM INDEL 0001.scaffold00002 20569 2 .C GA scaffold794 ScafM SNP 0001.scaffold00002 20577 1 G T scaffold794 ScafM SNP 0001.scaffold00002 20586 1 T A scaffold794 ReadM SNP 0001.scaffold00002 20676 1 A T - ReadM SNP 0001.scaffold00002 20806 1 T C - ReadM SNP 0001.scaffold00002 21089 1 G A - ReadM SNP 0001.scaffold00002 21125 1 C T - ScafM SNP 0001.scaffold00002 21227 1 T C scaffold794 ScafM SNP 0001.scaffold00002 21230 1 A C scaffold794 ScafM SNP 0001.scaffold00002 21240 1 A T scaffold794 ScafM SNP 0001.scaffold00002 21245 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 21255 4 ATAA .... scaffold794 ScafM SNP 0001.scaffold00002 21398 1 T C scaffold794 ScafM SNP 0001.scaffold00002 21414 1 A G scaffold794 ScafM SNP 0001.scaffold00002 21420 1 A C scaffold794 ScafM SNP 0001.scaffold00002 21442 1 A G scaffold794 ScafM SNP 0001.scaffold00002 21461 1 G A scaffold794 ScafM SNP 0001.scaffold00002 21465 2 CC TT scaffold794 ScafM SNP 0001.scaffold00002 21476 1 C T scaffold794 ScafM SNP 0001.scaffold00002 21480 1 T C scaffold794 ScafM SNP 0001.scaffold00002 21492 1 G C scaffold794 ScafM SNP 0001.scaffold00002 21532 2 CA GG scaffold794 ScafM SNP 0001.scaffold00002 21549 1 G A scaffold794 ScafM SNP 0001.scaffold00002 21553 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 21587 3 ... AAG scaffold794 ScafM INDEL 0001.scaffold00002 21629 1 . T scaffold794 ScafM SNP 0001.scaffold00002 21632 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 21639 4 .... ATAT scaffold794 ScafM INDEL 0001.scaffold00002 21649 5 ..... AAAAT scaffold794 ScafM SNP 0001.scaffold00002 21708 1 T A scaffold794 ScafM SNP 0001.scaffold00002 21785 1 G T scaffold794 ScafM SNP 0001.scaffold00002 21838 1 G A scaffold794 ScafM SNP 0001.scaffold00002 22029 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 22042 2 .. AG scaffold794 ScafM SNP 0001.scaffold00002 22049 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 22079 14 .............. TTTTTTTTTTTTTT scaffold794 ScafM SNP 0001.scaffold00002 22096 1 A G scaffold794 ScafM SNP 0001.scaffold00002 22185 1 C T scaffold794 ScafM SNP 0001.scaffold00002 22717 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 22782 4 AAAA .... scaffold794 ScafM SNP 0001.scaffold00002 22787 1 A T scaffold794 ScafM SNP 0001.scaffold00002 22837 1 A G scaffold794 Both SNP 0001.scaffold00002 23067 1 A G scaffold794 Both INDEL 0001.scaffold00002 23106 1 A . scaffold794 Both SNP 0001.scaffold00002 23132 1 A C scaffold794 Both SNP 0001.scaffold00002 23650 1 C T scaffold794 Both SNP 0001.scaffold00002 23742 1 T G scaffold794 Both SNP 0001.scaffold00002 23782 1 A G scaffold794 Both SNP 0001.scaffold00002 23956 1 A G scaffold794 Both SNP 0001.scaffold00002 24027 1 C T scaffold794 Both SNP 0001.scaffold00002 24217 1 G A scaffold794 ReadM INDEL 0001.scaffold00002 24483 1 T . - ScafM INDEL 0001.scaffold00002 24483 2 .. TT scaffold794 Both SNP 0001.scaffold00002 24608 1 T C scaffold794 Both SNP 0001.scaffold00002 25080 1 T C scaffold794 Both SNP 0001.scaffold00002 25103 1 T A scaffold794 Both SNP 0001.scaffold00002 25434 1 A C scaffold794 Both SNP 0001.scaffold00002 25855 1 G A scaffold794 Both INDEL 0001.scaffold00002 26291 1 T . scaffold794 ReadM SNP 0001.scaffold00002 27129 1 G A - ReadM SNP 0001.scaffold00002 27188 1 A C - ReadM SNP 0001.scaffold00002 27311 1 G A - Both SNP 0001.scaffold00002 27379 1 A G scaffold794 ScafM SNP 0001.scaffold00002 27474 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 27493 8 ........ ATATTTTT scaffold794 ScafM SNP 0001.scaffold00002 27495 1 G A scaffold794 Both SNP 0001.scaffold00002 27660 1 T C scaffold794 ScafM SNP 0001.scaffold00002 27732 2 CT TC scaffold794 Both SNP 0001.scaffold00002 27923 1 T C scaffold794 Both SNP 0001.scaffold00002 28032 1 C T scaffold794 ScafM SNP 0001.scaffold00002 28038 2 GT AC scaffold794 Both SNP 0001.scaffold00002 28078 1 A G scaffold794 ScafM SNP 0001.scaffold00002 28105 1 C T scaffold794 Both SNP 0001.scaffold00002 28240 1 G T scaffold794 Both SNP 0001.scaffold00002 28303 1 C T scaffold794 ScafM SNP 0001.scaffold00002 28327 2 CC AT scaffold794 ScafM SNP 0001.scaffold00002 28441 1 A G scaffold794 Both SNP 0001.scaffold00002 28580 1 G C scaffold794 Both SNP 0001.scaffold00002 29072 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 29081 1 A . scaffold794 ScafM INDEL 0001.scaffold00002 29114 1 T . scaffold794 ScafM INDEL 0001.scaffold00002 29129 6 GACAAC ...... scaffold794 ScafM INDEL 0001.scaffold00002 29136 3 TTT ... scaffold794 ScafM SNP 0001.scaffold00002 29142 1 A G scaffold794 ScafM SNP 0001.scaffold00002 29154 1 G T scaffold794 Both SNP 0001.scaffold00002 29601 1 A G scaffold794 Both SNP 0001.scaffold00002 29643 1 C T scaffold794 ScafM SNP 0001.scaffold00002 29647 2 CT GA scaffold794 Both SNP 0001.scaffold00002 29850 1 T G scaffold794 Both SNP 0001.scaffold00002 29913 1 C A scaffold794 Both SNP 0001.scaffold00002 30010 1 G C scaffold794 Both SNP 0001.scaffold00002 30109 1 T C scaffold794 Both SNP 0001.scaffold00002 30185 1 T C scaffold794 Both SNP 0001.scaffold00002 30197 1 G A scaffold794 Both SNP 0001.scaffold00002 30569 1 C T scaffold794 Both SNP 0001.scaffold00002 30640 1 A T scaffold794 Both INDEL 0001.scaffold00002 30823 1 A . scaffold794 Both SNP 0001.scaffold00002 30844 1 C T scaffold794 Both SNP 0001.scaffold00002 30853 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 30874 5 AATAT ....C scaffold794 ScafM SNP 0001.scaffold00002 30881 1 A G scaffold794 Both SNP 0001.scaffold00002 30934 1 A G scaffold794 ScafM SNP 0001.scaffold00002 30968 1 A G scaffold794 ScafM SNP 0001.scaffold00002 30970 1 G A scaffold794 Both SNP 0001.scaffold00002 31050 1 C G scaffold794 ScafM SNP 0001.scaffold00002 31234 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 31249 2 GA .. scaffold794 ScafM SNP 0001.scaffold00002 31259 1 G A scaffold794 ScafM SNP 0001.scaffold00002 31285 1 G A scaffold794 ScafM SNP 0001.scaffold00002 31442 1 A G scaffold794 ScafM SNP 0001.scaffold00002 32073 1 G A scaffold794 ReadM SNP 0001.scaffold00002 33391 1 T C - ReadM SNP 0001.scaffold00002 33414 1 A G - ReadM SNP 0001.scaffold00002 33569 1 T A - ReadM SNP 0001.scaffold00002 33666 1 A G - ReadM SNP 0001.scaffold00002 33741 1 C T - ReadM SNP 0001.scaffold00002 33802 1 C T - Both SNP 0001.scaffold00002 33811 1 T C scaffold794 ScafM SNP 0001.scaffold00002 33839 1 C A scaffold794 ScafM SNP 0001.scaffold00002 33864 1 C T scaffold794 Both SNP 0001.scaffold00002 33905 1 A G scaffold794 Both INDEL 0001.scaffold00002 33918 1 . T scaffold794 Both INDEL 0001.scaffold00002 33950 1 . T scaffold794 ScafM SNP 0001.scaffold00002 33960 1 G T scaffold794 Both SNP 0001.scaffold00002 34048 1 A G scaffold794 Both SNP 0001.scaffold00002 34064 1 T A scaffold794 Both SNP 0001.scaffold00002 34117 1 T C scaffold794 ScafM SNP 0001.scaffold00002 34306 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 34590 3 ... AAA scaffold794 ScafM SNP 0001.scaffold00002 34598 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 34651 2 TA .. scaffold794 ScafM INDEL 0001.scaffold00002 34708 1 . A scaffold794 ReadM SNP 0001.scaffold00002 38261 1 T C - ReadM SNP 0001.scaffold00002 38285 1 T C - ReadM INDEL 0001.scaffold00002 38434 1 C . - ReadM SNP 0001.scaffold00002 38709 1 A T - ReadM SNP 0001.scaffold00002 38766 1 G A - ReadM SNP 0001.scaffold00002 38773 1 A C - ScafM SNP 0001.scaffold00002 38894 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 38911 1 . C scaffold794 ScafM INDEL 0001.scaffold00002 38918 1 C . scaffold794 ScafM INDEL 0001.scaffold00002 38920 2 GC .A scaffold794 ReadM SNP 0001.scaffold00002 38949 1 A G - ScafM SNP 0001.scaffold00002 39158 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 39167 2 .. CA scaffold794 Both SNP 0001.scaffold00002 39184 1 C T scaffold794 Both SNP 0001.scaffold00002 39188 1 T A scaffold794 Both SNP 0001.scaffold00002 39342 1 C T scaffold794 Both SNP 0001.scaffold00002 39394 1 T C scaffold794 Both INDEL 0001.scaffold00002 39456 1 G . scaffold794 ScafM SNP 0001.scaffold00002 39461 2 GC AG scaffold794 Both SNP 0001.scaffold00002 39523 1 T G scaffold794 Both SNP 0001.scaffold00002 39605 1 G A scaffold794 ScafM SNP 0001.scaffold00002 39629 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 39664 8 ........ AATCATGA scaffold794 ScafM INDEL 0001.scaffold00002 39709 12 TTGCTATAACTC ............ scaffold794 ScafM SNP 0001.scaffold00002 39738 1 G A scaffold794 Both SNP 0001.scaffold00002 39743 1 G A scaffold794 Both SNP 0001.scaffold00002 39852 1 A T scaffold794 ScafM SNP 0001.scaffold00002 39878 1 T A scaffold794 Both SNP 0001.scaffold00002 39909 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 39929 6 AAAATC ...... scaffold794 ScafM INDEL 0001.scaffold00002 39936 2 AA .. scaffold794 Both SNP 0001.scaffold00002 40107 1 A T scaffold794 ScafM SNP 0001.scaffold00002 40151 2 GT TA scaffold794 Both SNP 0001.scaffold00002 40195 1 A G scaffold794 Both SNP 0001.scaffold00002 40296 1 G A scaffold794 Both SNP 0001.scaffold00002 40432 1 G C scaffold794 Both SNP 0001.scaffold00002 40506 1 C T scaffold794 ScafM SNP 0001.scaffold00002 40552 2 TT AA scaffold794 Both SNP 0001.scaffold00002 40635 1 T G scaffold794 Both SNP 0001.scaffold00002 40640 1 G A scaffold794 Both SNP 0001.scaffold00002 40668 1 T C scaffold794 Both SNP 0001.scaffold00002 40777 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 40790 30 .............................. TTTTAACAAATGCCAGGGGTATACCTAAGT scaffold794 ScafM SNP 0001.scaffold00002 40912 1 A G scaffold794 Both SNP 0001.scaffold00002 40944 1 T C scaffold794 ScafM SNP 0001.scaffold00002 41013 2 TG CA scaffold794 Both SNP 0001.scaffold00002 41077 1 T C scaffold794 Both SNP 0001.scaffold00002 41245 1 C T scaffold794 Both SNP 0001.scaffold00002 41264 1 A G scaffold794 ScafM SNP 0001.scaffold00002 41288 1 T C scaffold794 ScafM SNP 0001.scaffold00002 41296 1 G T scaffold794 ScafM SNP 0001.scaffold00002 41325 1 T C scaffold794 ScafM SNP 0001.scaffold00002 41336 1 A T scaffold794 ScafM SNP 0001.scaffold00002 41503 1 C G scaffold794 ScafM SNP 0001.scaffold00002 41618 1 A G scaffold794 ScafM SNP 0001.scaffold00002 41627 1 C A scaffold794 ScafM SNP 0001.scaffold00002 41696 1 T G scaffold794 ScafM SNP 0001.scaffold00002 41719 1 A G scaffold794 ScafM SNP 0001.scaffold00002 41761 1 G A scaffold794 ScafM SNP 0001.scaffold00002 41772 1 C G scaffold794 ScafM INDEL 0001.scaffold00002 41889 6 ...... AAAAAA scaffold794 ScafM SNP 0001.scaffold00002 42186 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 42227 2 AA .T scaffold794 ScafM SNP 0001.scaffold00002 42331 1 T A scaffold794 ScafM SNP 0001.scaffold00002 42342 1 G C scaffold794 ScafM SNP 0001.scaffold00002 42355 1 T G scaffold794 ScafM SNP 0001.scaffold00002 42369 1 C G scaffold794 Both SNP 0001.scaffold00002 42409 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 42488 20 GCAGCAATAGGATGCACAAC .................... scaffold794 ScafM INDEL 0001.scaffold00002 42509 4 GTAG .... scaffold794 Both SNP 0001.scaffold00002 42574 1 G T scaffold794 Both SNP 0001.scaffold00002 42587 1 C T scaffold794 Both SNP 0001.scaffold00002 42611 1 G T scaffold794 ScafM INDEL 0001.scaffold00002 42676 12 ............ TTGTAAACCAAC scaffold794 ScafM SNP 0001.scaffold00002 42722 1 T C scaffold794 Both SNP 0001.scaffold00002 42787 1 A G scaffold794 ScafM SNP 0001.scaffold00002 42804 2 AC GA scaffold794 Both SNP 0001.scaffold00002 42894 1 G C scaffold794 Both SNP 0001.scaffold00002 42909 1 G A scaffold794 Both SNP 0001.scaffold00002 42921 1 A C scaffold794 Both SNP 0001.scaffold00002 42962 1 G C scaffold794 Both SNP 0001.scaffold00002 42973 1 A C scaffold794 Both SNP 0001.scaffold00002 43008 1 G A scaffold794 ReadM SNP 0001.scaffold00002 43039 1 C A - ReadM SNP 0001.scaffold00002 43065 1 C T - Both SNP 0001.scaffold00002 43236 1 C T scaffold794 ScafM SNP 0001.scaffold00002 43358 1 T G scaffold794 Both SNP 0001.scaffold00002 43626 1 A C scaffold794 Both SNP 0001.scaffold00002 43654 1 T C scaffold794 Both SNP 0001.scaffold00002 43687 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 43715 13 ............. TGCGCACATAACC scaffold794 Both SNP 0001.scaffold00002 43819 1 T A scaffold794 ScafM SNP 0001.scaffold00002 43828 1 A C scaffold794 ReadM INDEL 0001.scaffold00002 43998 1 T . - Both SNP 0001.scaffold00002 44042 1 T C scaffold794 ReadM SNP 0001.scaffold00002 44071 1 T C - ReadM SNP 0001.scaffold00002 44102 1 G A - ReadM SNP 0001.scaffold00002 44147 1 T C - ScafM SNP 0001.scaffold00002 44303 1 T C scaffold794 Both INDEL 0001.scaffold00002 44363 1 T . scaffold794 Both SNP 0001.scaffold00002 44420 1 G A scaffold794 Both SNP 0001.scaffold00002 44542 1 G A scaffold794 ScafM SNP 0001.scaffold00002 44618 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 44627 4 GAGC .... scaffold794 Both SNP 0001.scaffold00002 44662 1 G C scaffold794 Both SNP 0001.scaffold00002 44691 1 C T scaffold794 Both SNP 0001.scaffold00002 44932 1 C G scaffold794 Both SNP 0001.scaffold00002 44997 1 T C scaffold794 Both SNP 0001.scaffold00002 45042 1 A G scaffold794 Both SNP 0001.scaffold00002 45131 1 G A scaffold794 ScafM SNP 0001.scaffold00002 45247 1 G C scaffold794 ScafM SNP 0001.scaffold00002 45250 1 T C scaffold794 Both SNP 0001.scaffold00002 45269 1 C T scaffold794 ScafM SNP 0001.scaffold00002 45338 1 G A scaffold794 ScafM SNP 0001.scaffold00002 45340 1 T G scaffold794 ScafM SNP 0001.scaffold00002 45352 1 T C scaffold794 ScafM SNP 0001.scaffold00002 45364 1 G A scaffold794 ScafM SNP 0001.scaffold00002 45377 1 C T scaffold794 ReadM SNP 0001.scaffold00002 45477 1 C T - ReadM INDEL 0001.scaffold00002 45516 1 A . - ReadM SNP 0001.scaffold00002 45532 1 A T - ReadM SNP 0001.scaffold00002 45727 1 A G - ReadM SNP 0001.scaffold00002 45744 1 A C - Both SNP 0001.scaffold00002 45949 1 C T scaffold794 Both SNP 0001.scaffold00002 46036 1 G A scaffold794 Both SNP 0001.scaffold00002 46056 1 T A scaffold794 ScafM SNP 0001.scaffold00002 46118 1 T C scaffold794 ScafM SNP 0001.scaffold00002 46139 1 T A scaffold794 ScafM SNP 0001.scaffold00002 46156 1 T A scaffold794 Both SNP 0001.scaffold00002 46203 1 T C scaffold794 Both SNP 0001.scaffold00002 46309 1 G C scaffold794 Both SNP 0001.scaffold00002 46354 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 46397 25 ......................... TCTTAGACATTTTTTCTGGAAATTA scaffold794 ScafM INDEL 0001.scaffold00002 46404 22 ...................... TATATATAACCGTGTTTTCGAC scaffold794 ScafM INDEL 0001.scaffold00002 46411 5 ..... ATGAA scaffold794 ScafM INDEL 0001.scaffold00002 46412 4 .... AACC scaffold794 ScafM INDEL 0001.scaffold00002 46414 3 ... TAC scaffold794 ScafM SNP 0001.scaffold00002 46417 1 G T scaffold794 ScafM SNP 0001.scaffold00002 46425 1 T C scaffold794 ScafM SNP 0001.scaffold00002 46438 1 C A scaffold794 Both SNP 0001.scaffold00002 46510 1 G A scaffold794 Both SNP 0001.scaffold00002 46516 1 G T scaffold794 ScafM SNP 0001.scaffold00002 46534 1 G T scaffold794 ScafM SNP 0001.scaffold00002 46546 2 AA TT scaffold794 ScafM SNP 0001.scaffold00002 46561 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 46602 2 .. TT scaffold794 ScafM SNP 0001.scaffold00002 46612 1 G A scaffold794 ScafM SNP 0001.scaffold00002 46616 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 46640 3 AAC ... scaffold794 ScafM SNP 0001.scaffold00002 46649 1 A G scaffold794 Both SNP 0001.scaffold00002 46709 1 G A scaffold794 Both SNP 0001.scaffold00002 46726 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 46758 8 GTTTTTTT ........ scaffold794 Both SNP 0001.scaffold00002 46964 1 C A scaffold794 Both SNP 0001.scaffold00002 47024 1 A T scaffold794 ReadM SNP 0001.scaffold00002 47245 1 A T - Both INDEL 0001.scaffold00002 47322 1 A . scaffold794 Both SNP 0001.scaffold00002 47357 2 GG AT scaffold794 ReadM SNP 0001.scaffold00002 47410 1 G T - ReadM SNP 0001.scaffold00002 47423 1 T A - ReadM SNP 0001.scaffold00002 47494 1 G A - ReadM SNP 0001.scaffold00002 47517 1 G A - ReadM INDEL 0001.scaffold00002 47632 1 . A - ReadM SNP 0001.scaffold00002 47640 1 G C - ReadM SNP 0001.scaffold00002 47646 1 T C - ReadM SNP 0001.scaffold00002 47766 1 G T - ReadM SNP 0001.scaffold00002 47888 1 G A - ReadM SNP 0001.scaffold00002 48638 1 A C - ReadM SNP 0001.scaffold00002 48673 1 C T - ReadM SNP 0001.scaffold00002 48741 1 G T - ReadM SNP 0001.scaffold00002 48777 1 A G - ReadM SNP 0001.scaffold00002 49158 1 T C - ReadM SNP 0001.scaffold00002 49199 1 T C - ReadM SNP 0001.scaffold00002 49252 1 C T - ReadM SNP 0001.scaffold00002 49254 1 A G - ReadM SNP 0001.scaffold00002 49641 1 T A - ReadM SNP 0001.scaffold00002 49653 1 G A - ReadM INDEL 0001.scaffold00002 49690 1 G . - ReadM SNP 0001.scaffold00002 50170 1 A G - ReadM SNP 0001.scaffold00002 51297 1 T C - ReadM SNP 0001.scaffold00002 51979 1 A G - ReadM SNP 0001.scaffold00002 51986 1 T C - ReadM SNP 0001.scaffold00002 52033 1 A T - ReadM SNP 0001.scaffold00002 52099 1 C T - ReadM SNP 0001.scaffold00002 52158 1 T C - ReadM SNP 0001.scaffold00002 52249 1 G A - ScafM SNP 0001.scaffold00002 52324 2 CA AT scaffold794 Both INDEL 0001.scaffold00002 52369 1 . A scaffold794 Both SNP 0001.scaffold00002 52429 1 C T scaffold794 Both SNP 0001.scaffold00002 52439 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 52556 2 TT .. scaffold794 ScafM INDEL 0001.scaffold00002 52563 1 . T scaffold794 ScafM SNP 0001.scaffold00002 52567 1 C A scaffold794 ScafM SNP 0001.scaffold00002 52586 1 C T scaffold794 ScafM SNP 0001.scaffold00002 52589 1 A G scaffold794 ScafM SNP 0001.scaffold00002 52614 1 A T scaffold794 ScafM SNP 0001.scaffold00002 52645 1 G A scaffold794 ScafM SNP 0001.scaffold00002 52657 1 A G scaffold794 ScafM SNP 0001.scaffold00002 52738 1 G C scaffold794 ScafM SNP 0001.scaffold00002 52802 1 T A scaffold794 ScafM SNP 0001.scaffold00002 52951 1 A C scaffold794 ScafM SNP 0001.scaffold00002 53016 1 T G scaffold794 ScafM SNP 0001.scaffold00002 56058 1 A G scaffold794 ScafM SNP 0001.scaffold00002 56068 1 T C scaffold794 ScafM SNP 0001.scaffold00002 56075 1 T G scaffold794 ScafM SNP 0001.scaffold00002 56299 1 G A scaffold794 ScafM SNP 0001.scaffold00002 56302 1 T C scaffold794 ScafM SNP 0001.scaffold00002 56361 1 G C scaffold794 ScafM SNP 0001.scaffold00002 56385 1 A G scaffold794 ScafM SNP 0001.scaffold00002 56405 1 A T scaffold794 Both SNP 0001.scaffold00002 56443 2 TT CA scaffold794 ReadM SNP 0001.scaffold00002 56628 1 G A - Both SNP 0001.scaffold00002 56713 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 56765 3 ... TTG scaffold794 Both SNP 0001.scaffold00002 56773 1 A C scaffold794 Both SNP 0001.scaffold00002 56824 1 G A scaffold794 Both SNP 0001.scaffold00002 56837 1 C T scaffold794 Both SNP 0001.scaffold00002 56941 1 T G scaffold794 Both SNP 0001.scaffold00002 56979 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 57012 6 ...... TGTAAT scaffold794 ScafM INDEL 0001.scaffold00002 57056 9 ATGCATTAT ......... scaffold794 Both SNP 0001.scaffold00002 57118 1 A G scaffold794 Both INDEL 0001.scaffold00002 57144 1 T . scaffold794 ScafM SNP 0001.scaffold00002 57148 1 T C scaffold794 ScafM SNP 0001.scaffold00002 57192 1 G C scaffold794 Both SNP 0001.scaffold00002 57250 1 C T scaffold794 Both SNP 0001.scaffold00002 57253 1 A G scaffold794 Both SNP 0001.scaffold00002 57292 1 T G scaffold794 Both SNP 0001.scaffold00002 57372 1 C T scaffold794 ReadM SNP 0001.scaffold00002 57591 1 G T - ReadM SNP 0001.scaffold00002 57595 1 C T - ScafM SNP 0001.scaffold00002 57811 1 G A scaffold794 ScafM SNP 0001.scaffold00002 57813 1 A T scaffold794 ScafM SNP 0001.scaffold00002 57815 1 A G scaffold794 Both SNP 0001.scaffold00002 57879 1 G A scaffold794 Both SNP 0001.scaffold00002 57901 1 A G scaffold794 Both SNP 0001.scaffold00002 57985 1 T A scaffold794 Both SNP 0001.scaffold00002 58047 1 A T scaffold794 Both INDEL 0001.scaffold00002 58097 1 T . scaffold794 Both SNP 0001.scaffold00002 58152 1 G A scaffold794 Both SNP 0001.scaffold00002 58210 1 T C scaffold794 Both SNP 0001.scaffold00002 58302 1 T G scaffold794 Both INDEL 0001.scaffold00002 58395 1 . G scaffold794 Both SNP 0001.scaffold00002 58573 1 A G scaffold794 Both SNP 0001.scaffold00002 58624 1 C T scaffold794 Both SNP 0001.scaffold00002 58747 1 A G scaffold794 Both SNP 0001.scaffold00002 58782 1 G A scaffold794 Both SNP 0001.scaffold00002 58954 1 T G scaffold794 ScafM INDEL 0001.scaffold00002 59048 2 .. CC scaffold794 Both SNP 0001.scaffold00002 59106 1 G T scaffold794 Both SNP 0001.scaffold00002 59139 1 C T scaffold794 Both SNP 0001.scaffold00002 59196 1 A G scaffold794 Both SNP 0001.scaffold00002 59346 1 A T scaffold794 Both SNP 0001.scaffold00002 59352 1 G T scaffold794 Both INDEL 0001.scaffold00002 59369 1 C . scaffold794 ReadM SNP 0001.scaffold00002 59478 1 T C - ReadM SNP 0001.scaffold00002 59567 1 G C - Both SNP 0001.scaffold00002 59657 1 A T scaffold794 ScafM INDEL 0001.scaffold00002 59706 3 ... CTG scaffold794 ScafM INDEL 0001.scaffold00002 59707 4 .... TTTT scaffold794 Both SNP 0001.scaffold00002 59984 1 A G scaffold794 Both INDEL 0001.scaffold00002 60045 1 . A scaffold794 Both SNP 0001.scaffold00002 60250 1 G A scaffold794 Both SNP 0001.scaffold00002 60274 1 T C scaffold794 Both SNP 0001.scaffold00002 60281 1 T A scaffold794 Both SNP 0001.scaffold00002 60407 1 C T scaffold794 Both SNP 0001.scaffold00002 60478 1 T A scaffold794 Both SNP 0001.scaffold00002 60508 1 A G scaffold794 Both INDEL 0001.scaffold00002 60535 1 A . scaffold794 Both SNP 0001.scaffold00002 60715 1 T C scaffold794 Both SNP 0001.scaffold00002 60725 1 T A scaffold794 ScafM INDEL 0001.scaffold00002 60764 4 CCCT .... scaffold794 Both SNP 0001.scaffold00002 60829 1 T C scaffold794 Both INDEL 0001.scaffold00002 60953 1 . C scaffold794 Both SNP 0001.scaffold00002 61068 1 A C scaffold794 Both SNP 0001.scaffold00002 61083 1 C T scaffold794 Both INDEL 0001.scaffold00002 61244 1 T . scaffold794 ScafM SNP 0001.scaffold00002 61252 1 C A scaffold794 Both SNP 0001.scaffold00002 61280 1 T C scaffold794 Both SNP 0001.scaffold00002 61304 1 C A scaffold794 Both SNP 0001.scaffold00002 61515 1 A C scaffold794 Both SNP 0001.scaffold00002 61521 1 G T scaffold794 Both SNP 0001.scaffold00002 61710 1 T A scaffold794 Both SNP 0001.scaffold00002 61754 1 C G scaffold794 Both INDEL 0001.scaffold00002 61874 1 . A scaffold794 Both SNP 0001.scaffold00002 61897 1 T C scaffold794 Both SNP 0001.scaffold00002 61925 1 A G scaffold794 Both INDEL 0001.scaffold00002 61959 1 . C scaffold794 Both SNP 0001.scaffold00002 62103 1 C T scaffold794 Both INDEL 0001.scaffold00002 62438 1 A . scaffold794 Both SNP 0001.scaffold00002 62457 1 A G scaffold794 Both SNP 0001.scaffold00002 62463 1 C G scaffold794 ScafM INDEL 0001.scaffold00002 62487 1 T . scaffold794 ScafM SNP 0001.scaffold00002 62531 1 A G scaffold794 ScafM SNP 0001.scaffold00002 62549 1 C T scaffold794 ScafM SNP 0001.scaffold00002 62562 2 AT TG scaffold794 ScafM INDEL 0001.scaffold00002 62567 1 T . scaffold794 ScafM INDEL 0001.scaffold00002 62578 4 GCTC .... scaffold794 ScafM INDEL 0001.scaffold00002 62584 3 CAA ... scaffold794 Both SNP 0001.scaffold00002 62716 1 A T scaffold794 Both SNP 0001.scaffold00002 62722 1 G A scaffold794 Both SNP 0001.scaffold00002 62757 1 A T scaffold794 Both SNP 0001.scaffold00002 62783 1 T C scaffold794 Both SNP 0001.scaffold00002 62823 1 C T scaffold794 Both SNP 0001.scaffold00002 62915 1 T A scaffold794 Both SNP 0001.scaffold00002 62979 1 A T scaffold794 Both SNP 0001.scaffold00002 62997 1 G A scaffold794 ScafM SNP 0001.scaffold00002 63008 1 A C scaffold794 ScafM SNP 0001.scaffold00002 63018 1 A G scaffold794 ScafM SNP 0001.scaffold00002 63072 1 T C scaffold794 ScafM SNP 0001.scaffold00002 63091 1 T A scaffold794 Both SNP 0001.scaffold00002 63139 1 T C scaffold794 Both SNP 0001.scaffold00002 63155 1 G A scaffold794 Both SNP 0001.scaffold00002 63158 1 T G scaffold794 Both SNP 0001.scaffold00002 63264 1 A G scaffold794 Both SNP 0001.scaffold00002 63281 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 63289 2 AG .. scaffold794 ScafM INDEL 0001.scaffold00002 63302 4 CCCT ...A scaffold794 ScafM INDEL 0001.scaffold00002 63308 2 TT .G scaffold794 ScafM SNP 0001.scaffold00002 63311 3 AAA CCC scaffold794 ScafM SNP 0001.scaffold00002 63316 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 63319 7 TTCCTTG ....... scaffold794 ScafM INDEL 0001.scaffold00002 63328 2 GA .T scaffold794 Both SNP 0001.scaffold00002 63374 1 T C scaffold794 Both SNP 0001.scaffold00002 63381 1 C T scaffold794 Both SNP 0001.scaffold00002 63435 1 A G scaffold794 Both SNP 0001.scaffold00002 63495 1 A G scaffold794 ScafM SNP 0001.scaffold00002 63510 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 63511 1 . A scaffold794 ScafM SNP 0001.scaffold00002 63524 1 C T scaffold794 ScafM SNP 0001.scaffold00002 63537 1 T G scaffold794 ScafM SNP 0001.scaffold00002 63546 1 C T scaffold794 ScafM SNP 0001.scaffold00002 63580 1 C T scaffold794 ScafM SNP 0001.scaffold00002 63582 1 A G scaffold794 ScafM SNP 0001.scaffold00002 63584 1 A G scaffold794 ScafM SNP 0001.scaffold00002 63617 1 T C scaffold794 Both SNP 0001.scaffold00002 63640 1 A G scaffold794 Both SNP 0001.scaffold00002 63675 1 C A scaffold794 ScafM SNP 0001.scaffold00002 63805 1 C T scaffold794 ScafM SNP 0001.scaffold00002 63824 1 T G scaffold794 ScafM SNP 0001.scaffold00002 63844 1 A T scaffold794 ScafM SNP 0001.scaffold00002 63851 1 A G scaffold794 ScafM SNP 0001.scaffold00002 63859 1 A T scaffold794 ScafM SNP 0001.scaffold00002 63901 1 T C scaffold794 ScafM SNP 0001.scaffold00002 63916 1 G T scaffold794 ScafM SNP 0001.scaffold00002 63935 1 C A scaffold794 ScafM SNP 0001.scaffold00002 63971 1 C T scaffold794 ScafM SNP 0001.scaffold00002 63996 1 C A scaffold794 ScafM SNP 0001.scaffold00002 64017 1 T C scaffold794 ScafM SNP 0001.scaffold00002 64035 1 T C scaffold794 ScafM SNP 0001.scaffold00002 64056 1 T C scaffold794 ScafM SNP 0001.scaffold00002 64084 1 C A scaffold794 ScafM SNP 0001.scaffold00002 67983 1 A C scaffold794 ScafM SNP 0001.scaffold00002 68002 1 G A scaffold794 ScafM SNP 0001.scaffold00002 68005 2 TC CT scaffold794 ScafM SNP 0001.scaffold00002 68041 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 68066 1 . A scaffold794 ScafM SNP 0001.scaffold00002 68092 1 T G scaffold794 ScafM INDEL 0001.scaffold00002 68145 1 A . scaffold794 ScafM SNP 0001.scaffold00002 68183 1 C T scaffold794 ScafM SNP 0001.scaffold00002 68201 1 A G scaffold794 ScafM SNP 0001.scaffold00002 68221 1 G A scaffold794 ScafM SNP 0001.scaffold00002 68239 2 AT GC scaffold794 ScafM SNP 0001.scaffold00002 68284 1 T G scaffold794 ScafM SNP 0001.scaffold00002 68315 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68332 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68361 1 T A scaffold794 ScafM SNP 0001.scaffold00002 68368 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68388 2 AA GG scaffold794 ScafM SNP 0001.scaffold00002 68469 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68471 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68473 1 C T scaffold794 ScafM SNP 0001.scaffold00002 68508 1 C G scaffold794 ScafM SNP 0001.scaffold00002 68522 1 G A scaffold794 ScafM SNP 0001.scaffold00002 68527 1 A C scaffold794 ScafM SNP 0001.scaffold00002 68545 1 T C scaffold794 ScafM SNP 0001.scaffold00002 68548 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 68564 3 GGT .AA scaffold794 ScafM SNP 0001.scaffold00002 68589 1 A G scaffold794 ScafM SNP 0001.scaffold00002 68612 1 A T scaffold794 ScafM SNP 0001.scaffold00002 68635 1 T A scaffold794 ScafM SNP 0001.scaffold00002 68653 1 G A scaffold794 ScafM SNP 0001.scaffold00002 69640 1 G A scaffold794 ScafM SNP 0001.scaffold00002 69651 1 T C scaffold794 ScafM SNP 0001.scaffold00002 69675 1 T C scaffold794 ReadM SNP 0001.scaffold00002 70608 1 C G - ReadM SNP 0001.scaffold00002 70644 1 G C - ReadM SNP 0001.scaffold00002 70686 1 T C - ReadM SNP 0001.scaffold00002 70786 1 T C - ReadM SNP 0001.scaffold00002 70790 1 T A - ReadM SNP 0001.scaffold00002 70850 1 C T - ReadM SNP 0001.scaffold00002 70921 1 T C - ReadM INDEL 0001.scaffold00002 70956 1 A . - ReadM SNP 0001.scaffold00002 70962 1 T C - ReadM SNP 0001.scaffold00002 71025 1 T G - ReadM SNP 0001.scaffold00002 71148 1 T A - ReadM SNP 0001.scaffold00002 71217 1 G A - ReadM SNP 0001.scaffold00002 71243 1 T A - ReadM SNP 0001.scaffold00002 71339 1 G A - ReadM SNP 0001.scaffold00002 71367 1 G A - ReadM INDEL 0001.scaffold00002 71395 1 T . - ReadM SNP 0001.scaffold00002 71469 1 T A - ReadM SNP 0001.scaffold00002 71501 1 T C - ReadM SNP 0001.scaffold00002 71521 1 T C - ScafM INDEL 0001.scaffold00002 72112 3 CAG ... scaffold886 ScafM SNP 0001.scaffold00002 72127 1 T C scaffold886 ScafM SNP 0001.scaffold00002 72135 1 A G scaffold886 ScafM SNP 0001.scaffold00002 72140 1 A C scaffold886 ScafM SNP 0001.scaffold00002 72152 1 G A scaffold886 ScafM INDEL 0001.scaffold00002 72165 5 CCAGC ..... scaffold886 ScafM INDEL 0001.scaffold00002 72171 4 CAGC .... scaffold886 ScafM SNP 0001.scaffold00002 72250 1 T C scaffold886 ScafM SNP 0001.scaffold00002 72353 1 A G scaffold886 ScafM INDEL 0001.scaffold00002 72393 1 G . scaffold886 ScafM SNP 0001.scaffold00002 72510 1 A T scaffold886 ScafM INDEL 0001.scaffold00002 72539 3 TCT ... scaffold886 ScafM INDEL 0001.scaffold00002 72545 3 TCT ... scaffold886 ScafM SNP 0001.scaffold00002 72561 1 A T scaffold886 ScafM SNP 0001.scaffold00002 72564 1 C T scaffold886 ScafM SNP 0001.scaffold00002 72568 1 A G scaffold886 ScafM SNP 0001.scaffold00002 72588 1 A G scaffold886 ScafM SNP 0001.scaffold00002 72661 1 T C scaffold886 ScafM SNP 0001.scaffold00002 72680 1 A G scaffold886 ScafM SNP 0001.scaffold00002 76471 1 G A scaffold886 ScafM SNP 0001.scaffold00002 76512 1 C T scaffold886 ScafM SNP 0001.scaffold00002 76545 1 C T scaffold886 ScafM SNP 0001.scaffold00002 76599 1 A T scaffold886 ScafM SNP 0001.scaffold00002 76604 1 T C scaffold886 ScafM SNP 0001.scaffold00002 76636 1 A G scaffold886 ScafM SNP 0001.scaffold00002 76677 1 T C scaffold886 ReadM SNP 0001.scaffold00002 77005 1 G C - ReadM SNP 0001.scaffold00002 77038 1 G A - ReadM SNP 0001.scaffold00002 77213 1 C A - ReadM SNP 0001.scaffold00002 77261 1 C T - ReadM SNP 0001.scaffold00002 77431 1 T C - ReadM SNP 0001.scaffold00002 77462 1 T C - ReadM SNP 0001.scaffold00002 77508 1 A C - ReadM SNP 0001.scaffold00002 77608 1 G A - ReadM SNP 0001.scaffold00002 77616 1 T C - ReadM SNP 0001.scaffold00002 77623 1 G A - ReadM SNP 0001.scaffold00002 77681 1 T C - ReadM SNP 0001.scaffold00002 77693 1 A G - ReadM SNP 0001.scaffold00002 77787 1 C T - ReadM SNP 0001.scaffold00002 77871 1 T A - ReadM SNP 0001.scaffold00002 77874 1 G A - ReadM SNP 0001.scaffold00002 77886 1 T C - ReadM SNP 0001.scaffold00002 77965 1 A G - ReadM SNP 0001.scaffold00002 78080 1 C G - ReadM SNP 0001.scaffold00002 78103 1 C T - ReadM SNP 0001.scaffold00002 78161 1 T A - ReadM INDEL 0001.scaffold00002 79234 1 . A - ReadM SNP 0001.scaffold00002 79253 1 T C - ScafM INDEL 0001.scaffold00002 79829 1 T . scaffold794 ScafM SNP 0001.scaffold00002 79865 1 T C scaffold794 ScafM SNP 0001.scaffold00002 79894 1 A G scaffold794 ScafM SNP 0001.scaffold00002 79923 1 A G scaffold794 ScafM SNP 0001.scaffold00002 79929 1 A G scaffold794 ScafM SNP 0001.scaffold00002 79961 1 T C scaffold794 ScafM SNP 0001.scaffold00002 79969 1 G A scaffold794 ScafM SNP 0001.scaffold00002 80032 1 A G scaffold794 ScafM SNP 0001.scaffold00002 80053 1 T C scaffold794 ScafM SNP 0001.scaffold00002 80072 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 80159 2 .. TT scaffold794 ScafM SNP 0001.scaffold00002 80265 1 T C scaffold794 ScafM SNP 0001.scaffold00002 80271 1 T C scaffold794 ScafM SNP 0001.scaffold00002 80301 1 T A scaffold794 ScafM SNP 0001.scaffold00002 80304 1 G A scaffold794 ScafM SNP 0001.scaffold00002 80307 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 80363 6 ...... AAAAAA scaffold794 ScafM SNP 0001.scaffold00002 80417 1 C T scaffold794 ReadM SNP 0001.scaffold00002 80543 1 T C - ReadM INDEL 0001.scaffold00002 80620 1 . A - ScafM SNP 0001.scaffold00002 80696 1 G C scaffold794 ScafM SNP 0001.scaffold00002 80704 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 80710 1 T . scaffold794 ScafM SNP 0001.scaffold00002 80713 1 T C scaffold794 ScafM SNP 0001.scaffold00002 80739 1 G T scaffold794 ScafM SNP 0001.scaffold00002 80745 2 CT TA scaffold794 ScafM SNP 0001.scaffold00002 80780 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 80795 2 AA .. scaffold794 ScafM INDEL 0001.scaffold00002 80798 5 GAGAG ..... scaffold794 ScafM INDEL 0001.scaffold00002 80804 1 T . scaffold794 ScafM INDEL 0001.scaffold00002 80806 1 T . scaffold794 ScafM SNP 0001.scaffold00002 80846 1 T G scaffold794 ScafM SNP 0001.scaffold00002 80853 1 G T scaffold794 ScafM SNP 0001.scaffold00002 80867 1 A G scaffold794 ReadM SNP 0001.scaffold00002 81097 1 C G - ScafM SNP 0001.scaffold00002 81195 1 T A scaffold794 ScafM SNP 0001.scaffold00002 81279 1 A G scaffold794 ScafM SNP 0001.scaffold00002 81282 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 81287 2 AG .. scaffold794 ScafM SNP 0001.scaffold00002 81304 1 T A scaffold794 ScafM SNP 0001.scaffold00002 81332 1 T C scaffold794 ScafM SNP 0001.scaffold00002 81334 1 A G scaffold794 ScafM SNP 0001.scaffold00002 81343 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 81437 13 ............. TAGTTCAATAGTT scaffold794 ScafM SNP 0001.scaffold00002 81449 1 A G scaffold794 ScafM SNP 0001.scaffold00002 81477 1 G A scaffold794 ScafM SNP 0001.scaffold00002 81484 1 G A scaffold794 ScafM SNP 0001.scaffold00002 81500 1 T C scaffold794 ScafM SNP 0001.scaffold00002 81502 1 T C scaffold794 ScafM SNP 0001.scaffold00002 82448 1 G A scaffold794 ScafM SNP 0001.scaffold00002 82473 1 A C scaffold794 ScafM SNP 0001.scaffold00002 82541 1 T C scaffold794 ScafM SNP 0001.scaffold00002 82571 1 T G scaffold794 ScafM SNP 0001.scaffold00002 82593 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 82604 1 . A scaffold794 ScafM SNP 0001.scaffold00002 82619 1 T C scaffold794 Both SNP 0001.scaffold00002 82731 1 T C scaffold794 Both SNP 0001.scaffold00002 82992 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 82997 2 .. TC scaffold794 ScafM SNP 0001.scaffold00002 83014 1 G A scaffold794 ScafM SNP 0001.scaffold00002 83034 1 T G scaffold794 ScafM SNP 0001.scaffold00002 83046 1 G T scaffold794 ScafM SNP 0001.scaffold00002 83048 1 T A scaffold794 ScafM INDEL 0001.scaffold00002 83071 1 C . scaffold794 ScafM INDEL 0001.scaffold00002 83078 1 . T scaffold794 ScafM SNP 0001.scaffold00002 83175 1 C T scaffold794 ScafM SNP 0001.scaffold00002 83190 1 G A scaffold794 ScafM SNP 0001.scaffold00002 83225 1 A G scaffold794 ScafM SNP 0001.scaffold00002 83230 1 A G scaffold794 ScafM SNP 0001.scaffold00002 83254 1 T A scaffold794 ScafM SNP 0001.scaffold00002 83270 1 G A scaffold794 ReadM SNP 0001.scaffold00002 83375 1 C T - ReadM INDEL 0001.scaffold00002 83452 1 T . - ScafM INDEL 0001.scaffold00002 84021 1 A . scaffold794 ScafM SNP 0001.scaffold00002 84026 1 T A scaffold794 ScafM SNP 0001.scaffold00002 84035 1 G T scaffold794 ScafM INDEL 0001.scaffold00002 84038 3 AAG ... scaffold794 ScafM SNP 0001.scaffold00002 84063 1 C A scaffold794 ScafM SNP 0001.scaffold00002 84076 2 CA AG scaffold794 ScafM SNP 0001.scaffold00002 84085 1 T C scaffold794 Both SNP 0001.scaffold00002 84171 1 C T scaffold794 ScafM SNP 0001.scaffold00002 84223 1 G T scaffold794 ScafM SNP 0001.scaffold00002 84232 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 84255 19 ................... AATCAACACTTTTATCTAC scaffold794 Both SNP 0001.scaffold00002 84309 1 T A scaffold794 Both SNP 0001.scaffold00002 84357 1 C G scaffold794 ReadM INDEL 0001.scaffold00002 84434 1 C . - ReadM SNP 0001.scaffold00002 84451 1 T C - ReadM SNP 0001.scaffold00002 84473 1 T A - ReadM SNP 0001.scaffold00002 84548 1 G C - ReadM SNP 0001.scaffold00002 84714 1 A G - ReadM SNP 0001.scaffold00002 84730 1 T C - ReadM SNP 0001.scaffold00002 84876 1 G A - ReadM SNP 0001.scaffold00002 84902 1 G A - ReadM SNP 0001.scaffold00002 84968 1 C T - ReadM SNP 0001.scaffold00002 85114 1 T C - ReadM INDEL 0001.scaffold00002 85146 1 . A - ReadM SNP 0001.scaffold00002 85181 1 A T - ReadM SNP 0001.scaffold00002 85266 1 T C - ReadM SNP 0001.scaffold00002 85311 1 G A - ReadM SNP 0001.scaffold00002 85326 1 T C - ReadM SNP 0001.scaffold00002 85395 1 C T - ReadM SNP 0001.scaffold00002 87908 1 A T - ReadM SNP 0001.scaffold00002 87941 1 T C - ReadM SNP 0001.scaffold00002 87987 1 T C - ReadM SNP 0001.scaffold00002 88407 1 C T - ReadM SNP 0001.scaffold00002 88440 1 A T - ScafM SNP 0001.scaffold00002 90874 1 G A scaffold794 ScafM SNP 0001.scaffold00002 90940 1 C A scaffold794 ScafM SNP 0001.scaffold00002 90946 1 A T scaffold794 ScafM SNP 0001.scaffold00002 90959 1 C T scaffold794 ScafM SNP 0001.scaffold00002 91963 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 92058 2 TA .. scaffold794 ScafM INDEL 0001.scaffold00002 92110 2 .. AA scaffold794 ScafM SNP 0001.scaffold00002 92142 1 A G scaffold794 ScafM SNP 0001.scaffold00002 92259 2 CC TA scaffold794 Both INDEL 0001.scaffold00002 92272 1 . T scaffold794 ScafM INDEL 0001.scaffold00002 92294 2 .. TA scaffold794 Both SNP 0001.scaffold00002 92363 1 C T scaffold794 ReadM SNP 0001.scaffold00002 92370 1 G T - ReadM SNP 0001.scaffold00002 92372 1 G A - ScafM SNP 0001.scaffold00002 92563 1 A C scaffold794 ScafM INDEL 0001.scaffold00002 92611 3 GAC ... scaffold794 ScafM INDEL 0001.scaffold00002 92615 1 A . scaffold794 ScafM SNP 0001.scaffold00002 92659 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 92826 4 TATA .... scaffold794 ScafM SNP 0001.scaffold00002 92851 1 G T scaffold794 ReadM SNP 0001.scaffold00002 93979 1 G A - ScafM SNP 0001.scaffold00002 94970 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 94982 4 .... ATTC scaffold794 ScafM SNP 0001.scaffold00002 95015 1 A G scaffold794 Both SNP 0001.scaffold00002 95086 1 T C scaffold794 ReadM SNP 0001.scaffold00002 95144 1 C T - ReadM SNP 0001.scaffold00002 95210 1 C T - ReadM SNP 0001.scaffold00002 95266 1 T C - ScafM INDEL 0001.scaffold00002 95423 4 TTAA .... scaffold794 Both SNP 0001.scaffold00002 95756 1 A G scaffold794 ScafM SNP 0001.scaffold00002 95857 1 T G scaffold794 ScafM SNP 0001.scaffold00002 95940 1 T C scaffold794 ScafM SNP 0001.scaffold00002 95979 1 A T scaffold794 ScafM SNP 0001.scaffold00002 96042 1 G T scaffold794 ScafM SNP 0001.scaffold00002 96083 1 G A scaffold794 ScafM SNP 0001.scaffold00002 96123 1 C T scaffold794 ScafM SNP 0001.scaffold00002 96135 1 C A scaffold794 ScafM SNP 0001.scaffold00002 96152 1 A T scaffold794 ScafM SNP 0001.scaffold00002 96169 1 T A scaffold794 ScafM INDEL 0001.scaffold00002 97424 1 C . scaffold794 ScafM SNP 0001.scaffold00002 97435 1 A C scaffold794 ScafM SNP 0001.scaffold00002 97451 1 A G scaffold794 ScafM SNP 0001.scaffold00002 97487 1 T C scaffold794 ScafM SNP 0001.scaffold00002 97496 1 C T scaffold794 ScafM SNP 0001.scaffold00002 97536 1 T A scaffold794 ScafM SNP 0001.scaffold00002 97540 1 T G scaffold794 ScafM SNP 0001.scaffold00002 97576 1 A G scaffold794 ScafM SNP 0001.scaffold00002 97615 1 T A scaffold794 ScafM SNP 0001.scaffold00002 97645 1 A G scaffold794 ScafM SNP 0001.scaffold00002 98156 1 A G scaffold794 ScafM SNP 0001.scaffold00002 98167 1 G A scaffold794 ScafM SNP 0001.scaffold00002 98192 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 98490 2 .. AA scaffold794 ScafM INDEL 0001.scaffold00002 98582 2 .. AA scaffold794 Both SNP 0001.scaffold00002 98623 1 G C scaffold794 ScafM SNP 0001.scaffold00002 98705 1 G A scaffold794 ScafM SNP 0001.scaffold00002 98710 1 T G scaffold794 ScafM SNP 0001.scaffold00002 98713 1 G A scaffold794 ScafM SNP 0001.scaffold00002 98728 1 T C scaffold794 ReadM SNP 0001.scaffold00002 98887 1 C T - ReadM SNP 0001.scaffold00002 99020 1 C G - Both INDEL 0001.scaffold00002 99164 1 A . scaffold794 Both SNP 0001.scaffold00002 99174 1 C T scaffold794 ScafM SNP 0001.scaffold00002 99238 1 T C scaffold794 ScafM SNP 0001.scaffold00002 99288 1 T A scaffold794 ReadM SNP 0001.scaffold00002 99566 1 T A - ReadM SNP 0001.scaffold00002 99592 1 A G - ReadM SNP 0001.scaffold00002 99651 1 G A - ReadM SNP 0001.scaffold00002 100209 1 G A - ReadM SNP 0001.scaffold00002 100225 1 A C - ScafM SNP 0001.scaffold00002 100700 1 A G scaffold794 ScafM SNP 0001.scaffold00002 100723 1 T C scaffold794 ScafM SNP 0001.scaffold00002 100797 1 A G scaffold794 ScafM SNP 0001.scaffold00002 100802 1 C T scaffold794 ScafM SNP 0001.scaffold00002 100880 1 G A scaffold794 ScafM SNP 0001.scaffold00002 100882 1 T C scaffold794 ScafM SNP 0001.scaffold00002 101401 1 G A scaffold794 ScafM SNP 0001.scaffold00002 101419 1 A T scaffold794 ScafM SNP 0001.scaffold00002 101425 1 T C scaffold794 ScafM SNP 0001.scaffold00002 101490 1 T C scaffold794 ReadM SNP 0001.scaffold00002 102294 1 G A - ReadM SNP 0001.scaffold00002 102316 1 C T - ReadM SNP 0001.scaffold00002 102345 1 A G - ReadM SNP 0001.scaffold00002 102514 1 G A - ReadM SNP 0001.scaffold00002 102517 1 C G - ReadM SNP 0001.scaffold00002 102589 1 T G - ReadM SNP 0001.scaffold00002 102600 1 T C - ReadM SNP 0001.scaffold00002 102665 1 A G - ReadM SNP 0001.scaffold00002 102702 1 A G - ReadM SNP 0001.scaffold00002 102778 1 A G - ReadM SNP 0001.scaffold00002 102787 1 C T - ReadM SNP 0001.scaffold00002 102816 1 C G - ReadM SNP 0001.scaffold00002 102824 1 G C - ReadM SNP 0001.scaffold00002 102921 1 C T - ReadM SNP 0001.scaffold00002 102944 1 C A - ReadM SNP 0001.scaffold00002 102958 1 C G - ReadM SNP 0001.scaffold00002 103005 1 T C - ReadM SNP 0001.scaffold00002 103051 1 G A - ReadM SNP 0001.scaffold00002 103265 1 T G - ReadM SNP 0001.scaffold00002 103335 1 A T - ReadM SNP 0001.scaffold00002 103343 1 G A - ReadM SNP 0001.scaffold00002 103379 1 C T - ReadM SNP 0001.scaffold00002 103498 1 C T - ReadM SNP 0001.scaffold00002 103567 1 G A - ReadM SNP 0001.scaffold00002 103618 1 A G - ReadM SNP 0001.scaffold00002 103634 1 G T - ReadM SNP 0001.scaffold00002 103637 1 C G - ReadM SNP 0001.scaffold00002 103669 1 G A - ReadM SNP 0001.scaffold00002 103961 1 C A - ReadM SNP 0001.scaffold00002 104023 1 G T - ReadM SNP 0001.scaffold00002 104035 1 C T - ReadM SNP 0001.scaffold00002 104044 1 A G - ReadM SNP 0001.scaffold00002 104141 1 G C - ReadM SNP 0001.scaffold00002 104184 1 T C - ReadM INDEL 0001.scaffold00002 104270 1 T . - ReadM SNP 0001.scaffold00002 104298 1 A G - ReadM SNP 0001.scaffold00002 104415 1 T C - ReadM SNP 0001.scaffold00002 104595 1 T C - ReadM SNP 0001.scaffold00002 104598 1 T C - ReadM SNP 0001.scaffold00002 104613 1 A G - ReadM SNP 0001.scaffold00002 104717 1 G A - ReadM SNP 0001.scaffold00002 104759 1 A G - ReadM SNP 0001.scaffold00002 104763 1 C T - ReadM SNP 0001.scaffold00002 104917 1 G A - ReadM SNP 0001.scaffold00002 104938 1 C A - ReadM SNP 0001.scaffold00002 104956 1 T C - ReadM SNP 0001.scaffold00002 105032 1 C T - ReadM SNP 0001.scaffold00002 105070 1 G A - ReadM SNP 0001.scaffold00002 105126 1 A G - ReadM INDEL 0001.scaffold00002 105220 1 . T - ReadM SNP 0001.scaffold00002 105239 1 T C - ReadM SNP 0001.scaffold00002 105313 1 A C - ReadM SNP 0001.scaffold00002 105393 1 C T - ReadM SNP 0001.scaffold00002 105420 1 A T - ReadM SNP 0001.scaffold00002 105432 1 C T - ReadM SNP 0001.scaffold00002 105456 1 A G - ReadM SNP 0001.scaffold00002 105530 1 T G - ReadM INDEL 0001.scaffold00002 105552 1 T . - ReadM SNP 0001.scaffold00002 105607 1 C T - ReadM SNP 0001.scaffold00002 105751 1 G T - ReadM SNP 0001.scaffold00002 105776 1 C T - ReadM SNP 0001.scaffold00002 105820 1 A G - ReadM SNP 0001.scaffold00002 105850 1 A G - ReadM SNP 0001.scaffold00002 105898 1 T C - ReadM SNP 0001.scaffold00002 105951 1 T A - ReadM SNP 0001.scaffold00002 105994 1 A G - ReadM SNP 0001.scaffold00002 106076 1 C T - ReadM SNP 0001.scaffold00002 106140 1 T C - ReadM SNP 0001.scaffold00002 106200 1 A T - ReadM INDEL 0001.scaffold00002 106272 2 .. AT - Both SNP 0001.scaffold00002 106359 1 G A scaffold794 Both SNP 0001.scaffold00002 106366 1 A G scaffold794 Both SNP 0001.scaffold00002 106384 1 T C scaffold794 ReadM SNP 0001.scaffold00002 106402 1 T C - ReadM SNP 0001.scaffold00002 106431 1 C T - ReadM INDEL 0001.scaffold00002 106520 1 T . - ReadM SNP 0001.scaffold00002 106557 1 T C - ReadM SNP 0001.scaffold00002 106608 1 G T - ReadM SNP 0001.scaffold00002 106716 1 A G - ReadM SNP 0001.scaffold00002 106754 1 A G - ReadM SNP 0001.scaffold00002 106782 1 A G - ReadM SNP 0001.scaffold00002 106884 1 T A - Both INDEL 0001.scaffold00002 107016 1 . C scaffold794 Both SNP 0001.scaffold00002 107104 1 A T scaffold794 ReadM SNP 0001.scaffold00002 107164 1 C T - ReadM SNP 0001.scaffold00002 107247 1 G T - ReadM SNP 0001.scaffold00002 107255 1 A G - ReadM SNP 0001.scaffold00002 107351 1 C T - ReadM SNP 0001.scaffold00002 107394 1 A G - ReadM SNP 0001.scaffold00002 107402 1 T G - ReadM INDEL 0001.scaffold00002 107554 1 . C - Both SNP 0001.scaffold00002 107575 1 G A scaffold794 ReadM SNP 0001.scaffold00002 107745 1 T A - ReadM SNP 0001.scaffold00002 107783 1 A T - ReadM SNP 0001.scaffold00002 107836 1 A G - ReadM SNP 0001.scaffold00002 107906 1 A C - ReadM SNP 0001.scaffold00002 107942 1 G T - ScafM INDEL 0001.scaffold00002 108007 2 .. AA scaffold794 ScafM SNP 0001.scaffold00002 108043 1 C G scaffold794 ReadM SNP 0001.scaffold00002 108132 1 T C - ReadM SNP 0001.scaffold00002 108135 1 T C - ReadM SNP 0001.scaffold00002 108205 1 G A - ReadM SNP 0001.scaffold00002 108313 1 G A - Both SNP 0001.scaffold00002 108414 1 G C scaffold794 Both SNP 0001.scaffold00002 108423 1 G C scaffold794 Both SNP 0001.scaffold00002 108461 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 108512 5 ..... TTTAA scaffold794 Both SNP 0001.scaffold00002 108587 1 A G scaffold794 Both SNP 0001.scaffold00002 108638 1 G T scaffold794 Both INDEL 0001.scaffold00002 108696 1 . A scaffold794 Both SNP 0001.scaffold00002 108735 1 T A scaffold794 Both SNP 0001.scaffold00002 108748 1 A C scaffold794 Both INDEL 0001.scaffold00002 108780 1 . A scaffold794 ScafM SNP 0001.scaffold00002 108841 1 T A scaffold794 Both INDEL 0001.scaffold00002 109101 2 TT .. scaffold794 Both SNP 0001.scaffold00002 109146 1 C A scaffold794 Both INDEL 0001.scaffold00002 109179 1 . G scaffold794 Both SNP 0001.scaffold00002 109205 1 T C scaffold794 ScafM SNP 0001.scaffold00002 109252 1 G A scaffold794 ScafM SNP 0001.scaffold00002 109265 1 T G scaffold794 ScafM SNP 0001.scaffold00002 109268 1 A G scaffold794 ScafM SNP 0001.scaffold00002 109276 1 A C scaffold794 ScafM SNP 0001.scaffold00002 109289 1 G A scaffold794 ScafM SNP 0001.scaffold00002 109306 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 109345 7 ....... CAAAGTG scaffold794 ScafM INDEL 0001.scaffold00002 109359 1 G . scaffold794 ScafM SNP 0001.scaffold00002 109425 1 A C scaffold794 ScafM SNP 0001.scaffold00002 109465 1 A T scaffold794 ScafM INDEL 0001.scaffold00002 109495 4 .... TTTT scaffold794 ScafM SNP 0001.scaffold00002 109497 1 C T scaffold794 ScafM SNP 0001.scaffold00002 109517 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 109521 1 . A scaffold794 ScafM SNP 0001.scaffold00002 109571 1 T A scaffold794 Both SNP 0001.scaffold00002 109635 1 G C scaffold794 Both INDEL 0001.scaffold00002 109650 1 A . scaffold794 Both SNP 0001.scaffold00002 109770 1 T A scaffold794 Both SNP 0001.scaffold00002 109788 1 T A scaffold794 ScafM SNP 0001.scaffold00002 109909 1 A G scaffold794 ScafM SNP 0001.scaffold00002 109966 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 109992 1 . A scaffold794 ScafM INDEL 0001.scaffold00002 110064 1 . A scaffold794 Both INDEL 0001.scaffold00002 110120 1 . T scaffold794 ScafM INDEL 0001.scaffold00002 110408 4 TATA .... scaffold794 Both SNP 0001.scaffold00002 110607 1 A T scaffold794 ScafM SNP 0001.scaffold00002 110879 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 110901 1 . T scaffold794 ScafM INDEL 0001.scaffold00002 110903 1 . T scaffold794 ScafM SNP 0001.scaffold00002 110920 1 T G scaffold794 ScafM INDEL 0001.scaffold00002 110978 2 .. TA scaffold794 ScafM INDEL 0001.scaffold00002 110981 4 .... AATT scaffold794 ScafM INDEL 0001.scaffold00002 110982 1 . A scaffold794 ScafM INDEL 0001.scaffold00002 110987 1 . G scaffold794 ScafM SNP 0001.scaffold00002 111018 1 C T scaffold794 ScafM SNP 0001.scaffold00002 111055 1 A G scaffold794 Both SNP 0001.scaffold00002 111086 1 A T scaffold794 Both SNP 0001.scaffold00002 111135 1 G T scaffold794 ScafM SNP 0001.scaffold00002 111176 1 G A scaffold794 ScafM SNP 0001.scaffold00002 111591 1 T C scaffold794 ScafM SNP 0001.scaffold00002 111617 1 C T scaffold794 ScafM SNP 0001.scaffold00002 111624 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 111634 1 T . scaffold794 ScafM SNP 0001.scaffold00002 111647 1 T C scaffold794 ScafM SNP 0001.scaffold00002 111657 1 G A scaffold794 ScafM SNP 0001.scaffold00002 111669 1 A G scaffold794 ScafM SNP 0001.scaffold00002 111683 1 A G scaffold794 ScafM SNP 0001.scaffold00002 112923 1 G A scaffold794 ScafM SNP 0001.scaffold00002 112931 1 A T scaffold794 ScafM SNP 0001.scaffold00002 112968 1 C A scaffold794 ScafM SNP 0001.scaffold00002 113073 2 TC AA scaffold794 ScafM SNP 0001.scaffold00002 113100 2 GA CG scaffold794 ScafM SNP 0001.scaffold00002 113105 1 C A scaffold794 ScafM SNP 0001.scaffold00002 113108 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 113130 3 ... CCA scaffold794 ScafM SNP 0001.scaffold00002 113166 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 113169 2 .G AA scaffold794 ScafM SNP 0001.scaffold00002 113182 2 TA CT scaffold794 ScafM INDEL 0001.scaffold00002 113191 1 T . scaffold794 ScafM INDEL 0001.scaffold00002 113198 13 CAATAGAAATAAA ............. scaffold794 ScafM SNP 0001.scaffold00002 113212 1 A C scaffold794 ScafM SNP 0001.scaffold00002 113218 1 T C scaffold794 ScafM SNP 0001.scaffold00002 113311 1 T C scaffold794 ScafM SNP 0001.scaffold00002 113378 1 C T scaffold794 ScafM SNP 0001.scaffold00002 113460 1 G T scaffold794 ScafM SNP 0001.scaffold00002 113485 1 G A scaffold794 ScafM SNP 0001.scaffold00002 113524 1 C T scaffold794 ScafM SNP 0001.scaffold00002 113544 1 C T scaffold794 ScafM SNP 0001.scaffold00002 113601 1 C A scaffold794 ScafM SNP 0001.scaffold00002 113618 1 T C scaffold794 ScafM SNP 0001.scaffold00002 113622 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 113756 1 . A scaffold794 ScafM SNP 0001.scaffold00002 113812 1 C T scaffold794 ScafM SNP 0001.scaffold00002 113886 1 A T scaffold794 ScafM SNP 0001.scaffold00002 113944 1 T A scaffold794 Both SNP 0001.scaffold00002 114367 1 T A scaffold794 ScafM INDEL 0001.scaffold00002 114581 2 CA .. scaffold794 ScafM SNP 0001.scaffold00002 114592 1 A T scaffold794 Both SNP 0001.scaffold00002 114630 1 G A scaffold794 ReadM SNP 0001.scaffold00002 114792 1 G A - ReadM SNP 0001.scaffold00002 114799 1 C T - Both SNP 0001.scaffold00002 114875 1 C T scaffold794 Both SNP 0001.scaffold00002 114878 1 T G scaffold794 ReadM SNP 0001.scaffold00002 114935 1 A G - ReadM SNP 0001.scaffold00002 115044 1 T C - ReadM SNP 0001.scaffold00002 115063 1 A C - ReadM SNP 0001.scaffold00002 115067 1 T C - Both SNP 0001.scaffold00002 115322 1 G A scaffold794 ReadM SNP 0001.scaffold00002 115441 1 A C - ReadM SNP 0001.scaffold00002 115444 1 G A - ReadM SNP 0001.scaffold00002 115482 1 C T - ReadM SNP 0001.scaffold00002 115533 1 C T - ReadM SNP 0001.scaffold00002 115560 1 A G - ReadM SNP 0001.scaffold00002 115562 1 A G - Both SNP 0001.scaffold00002 115770 1 A T scaffold794 Both SNP 0001.scaffold00002 115795 1 C G scaffold794 Both SNP 0001.scaffold00002 115809 1 C A scaffold794 ScafM SNP 0001.scaffold00002 115864 1 T G scaffold794 ScafM SNP 0001.scaffold00002 115929 1 T C scaffold794 ScafM SNP 0001.scaffold00002 116155 1 C T scaffold794 ScafM SNP 0001.scaffold00002 116157 1 C T scaffold794 ScafM SNP 0001.scaffold00002 116161 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 116210 2 TT .. scaffold794 Both SNP 0001.scaffold00002 116266 1 G C scaffold794 ScafM SNP 0001.scaffold00002 116511 1 C A scaffold794 ScafM SNP 0001.scaffold00002 116571 1 A G scaffold794 ReadM SNP 0001.scaffold00002 116645 1 C T - ReadM SNP 0001.scaffold00002 116675 1 C T - ReadM SNP 0001.scaffold00002 116853 1 T G - ReadM SNP 0001.scaffold00002 116882 1 A T - Both SNP 0001.scaffold00002 117004 1 A G scaffold794 Both SNP 0001.scaffold00002 117006 1 A G scaffold794 ReadM INDEL 0001.scaffold00002 117087 1 T . - Both SNP 0001.scaffold00002 117203 1 A C scaffold794 Both SNP 0001.scaffold00002 117240 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 117307 1 . A scaffold794 ScafM SNP 0001.scaffold00002 117311 1 T G scaffold794 ReadM SNP 0001.scaffold00002 117368 1 C T - ReadM SNP 0001.scaffold00002 117408 1 A T - ReadM SNP 0001.scaffold00002 117484 1 T C - ReadM SNP 0001.scaffold00002 117504 1 A C - ScafM SNP 0001.scaffold00002 117549 1 A G scaffold794 ScafM SNP 0001.scaffold00002 117580 1 G C scaffold794 ScafM INDEL 0001.scaffold00002 118109 1 A . scaffold794 ScafM SNP 0001.scaffold00002 118114 1 A G scaffold794 ScafM SNP 0001.scaffold00002 118121 1 G A scaffold794 ScafM SNP 0001.scaffold00002 118129 1 A G scaffold794 ScafM SNP 0001.scaffold00002 118132 2 TG CA scaffold794 ScafM SNP 0001.scaffold00002 118150 1 G A scaffold794 ScafM SNP 0001.scaffold00002 118179 1 G A scaffold794 ScafM SNP 0001.scaffold00002 118211 1 C T scaffold794 ScafM SNP 0001.scaffold00002 118233 1 C A scaffold794 ScafM SNP 0001.scaffold00002 118272 1 T G scaffold794 ScafM SNP 0001.scaffold00002 118335 1 A T scaffold794 Both SNP 0001.scaffold00002 118507 1 A C scaffold794 ScafM SNP 0001.scaffold00002 118564 1 A T scaffold794 ScafM SNP 0001.scaffold00002 118578 1 G A scaffold794 ScafM SNP 0001.scaffold00002 118580 1 G C scaffold794 Both SNP 0001.scaffold00002 119115 1 A T scaffold794 ScafM SNP 0001.scaffold00002 119402 1 T A scaffold794 Both SNP 0001.scaffold00002 119484 1 C T scaffold794 ScafM SNP 0001.scaffold00002 119518 1 G A scaffold794 ScafM SNP 0001.scaffold00002 119539 1 A T scaffold794 ScafM SNP 0001.scaffold00002 119623 1 A T scaffold794 ScafM SNP 0001.scaffold00002 119642 1 A G scaffold794 ScafM SNP 0001.scaffold00002 119663 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 119759 29 ............................. AAAAAAAAAAAAAAAAAAAAAAAAAAAAA scaffold794 ScafM SNP 0001.scaffold00002 119812 1 T A scaffold794 ScafM SNP 0001.scaffold00002 120095 1 G T scaffold794 ScafM SNP 0001.scaffold00002 120375 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 120400 3 ATT ... scaffold794 Both SNP 0001.scaffold00002 120551 1 T C scaffold794 Both INDEL 0001.scaffold00002 120652 1 . A scaffold794 ScafM INDEL 0001.scaffold00002 120722 4 .... GCAT scaffold794 ScafM SNP 0001.scaffold00002 120747 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 120766 3 ... CTC scaffold794 ScafM INDEL 0001.scaffold00002 120767 1 . A scaffold794 ScafM INDEL 0001.scaffold00002 120774 3 ... GTT scaffold794 ScafM SNP 0001.scaffold00002 120778 1 C A scaffold794 Both SNP 0001.scaffold00002 120820 1 G T scaffold794 Both INDEL 0001.scaffold00002 120831 1 . G scaffold794 Both SNP 0001.scaffold00002 120903 1 A G scaffold794 ReadM SNP 0001.scaffold00002 121928 1 T C - ReadM SNP 0001.scaffold00002 121952 1 A G - ScafM SNP 0001.scaffold00002 126309 1 C T scaffold794 ScafM SNP 0001.scaffold00002 126490 1 T G scaffold794 ScafM INDEL 0001.scaffold00002 126777 1 A . scaffold794 ScafM INDEL 0001.scaffold00002 127051 1 T . scaffold794 ScafM SNP 0001.scaffold00002 127647 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 129925 1 C . scaffold794 ReadM SNP 0001.scaffold00002 130927 1 A C - ReadM SNP 0001.scaffold00002 130932 1 T C - ReadM INDEL 0001.scaffold00002 130950 1 A . - ReadM SNP 0001.scaffold00002 131517 1 C T - Both SNP 0001.scaffold00002 131972 1 T G scaffold794 Both SNP 0001.scaffold00002 132706 1 A G scaffold794 Both SNP 0001.scaffold00002 132721 1 A G scaffold794 Both SNP 0001.scaffold00002 132814 1 T C scaffold794 Both SNP 0001.scaffold00002 132876 1 C T scaffold794 ReadM SNP 0001.scaffold00002 133330 1 C T - ReadM SNP 0001.scaffold00002 133801 1 T C - ReadM SNP 0001.scaffold00002 136310 1 A G - ReadM SNP 0001.scaffold00002 136335 1 A G - ReadM SNP 0001.scaffold00002 136433 1 T A - Both SNP 0001.scaffold00002 137275 1 T C scaffold794 ScafM SNP 0001.scaffold00002 137285 2 CT TG scaffold794 Both SNP 0001.scaffold00002 137325 1 T C scaffold794 Both INDEL 0001.scaffold00002 137400 3 TCA ... scaffold794 Both SNP 0001.scaffold00002 137599 1 G A scaffold794 Both SNP 0001.scaffold00002 137714 1 A G scaffold794 Both SNP 0001.scaffold00002 137750 1 C T scaffold794 Both INDEL 0001.scaffold00002 137767 2 .. TA scaffold794 Both SNP 0001.scaffold00002 137922 1 C T scaffold794 Both SNP 0001.scaffold00002 137950 1 G T scaffold794 ReadM INDEL 0001.scaffold00002 137999 1 G . - ReadM SNP 0001.scaffold00002 138018 1 C T - Both SNP 0001.scaffold00002 138240 1 C A scaffold794 ReadM SNP 0001.scaffold00002 138327 1 C T - ReadM SNP 0001.scaffold00002 138375 1 G C - ReadM SNP 0001.scaffold00002 138386 1 A G - ReadM SNP 0001.scaffold00002 138411 1 G T - ReadM SNP 0001.scaffold00002 138499 1 T C - ReadM SNP 0001.scaffold00002 138582 1 C T - ScafM SNP 0001.scaffold00002 138648 1 A G scaffold794 Both SNP 0001.scaffold00002 138680 1 A C scaffold794 Both SNP 0001.scaffold00002 138695 1 A T scaffold794 Both INDEL 0001.scaffold00002 138699 1 . A scaffold794 Both SNP 0001.scaffold00002 138847 1 G A scaffold794 Both SNP 0001.scaffold00002 138935 1 A C scaffold794 ScafM SNP 0001.scaffold00002 139085 1 T C scaffold794 Both INDEL 0001.scaffold00002 139086 1 . A scaffold794 Both SNP 0001.scaffold00002 139094 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 139128 7 TAATATG ....... scaffold794 ScafM INDEL 0001.scaffold00002 139139 3 TAT ... scaffold794 ScafM SNP 0001.scaffold00002 139199 1 A G scaffold794 ScafM SNP 0001.scaffold00002 139206 1 A G scaffold794 ScafM SNP 0001.scaffold00002 139261 1 C T scaffold794 ScafM SNP 0001.scaffold00002 139399 1 G A scaffold794 ScafM SNP 0001.scaffold00002 139424 1 A G scaffold794 ScafM SNP 0001.scaffold00002 139429 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 139436 1 T . scaffold794 ScafM SNP 0001.scaffold00002 139526 1 T C scaffold794 ScafM SNP 0001.scaffold00002 139551 1 A G scaffold794 ScafM SNP 0001.scaffold00002 141003 1 C A scaffold794 ScafM SNP 0001.scaffold00002 141009 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 141048 4 .... TATA scaffold794 ScafM SNP 0001.scaffold00002 141054 1 G A scaffold794 ScafM SNP 0001.scaffold00002 141066 1 G A scaffold794 Both SNP 0001.scaffold00002 141086 1 C T scaffold794 ScafM SNP 0001.scaffold00002 141222 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 141399 2 TC .. scaffold794 Both INDEL 0001.scaffold00002 141440 1 . A scaffold794 Both SNP 0001.scaffold00002 141508 1 T C scaffold794 Both SNP 0001.scaffold00002 141518 1 A G scaffold794 ReadM SNP 0001.scaffold00002 141583 1 G A - ReadM SNP 0001.scaffold00002 141687 1 G A - ReadM INDEL 0001.scaffold00002 141703 2 TA .. - Both SNP 0001.scaffold00002 141853 1 G A scaffold794 Both SNP 0001.scaffold00002 141977 1 T C scaffold794 Both SNP 0001.scaffold00002 141994 1 A G scaffold794 Both SNP 0001.scaffold00002 142069 1 T G scaffold794 Both SNP 0001.scaffold00002 142140 1 T A scaffold794 Both SNP 0001.scaffold00002 142156 1 A C scaffold794 Both SNP 0001.scaffold00002 142194 1 C T scaffold794 ScafM SNP 0001.scaffold00002 142412 1 A T scaffold794 ScafM SNP 0001.scaffold00002 142458 1 C T scaffold794 ScafM SNP 0001.scaffold00002 142507 1 T C scaffold794 ScafM SNP 0001.scaffold00002 142630 1 A G scaffold794 ScafM SNP 0001.scaffold00002 142856 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 142938 18 .................. TGGAATCCTGATATTCGG scaffold794 ScafM INDEL 0001.scaffold00002 142940 4 .... GACT scaffold794 ScafM INDEL 0001.scaffold00002 142942 1 . A scaffold794 ScafM SNP 0001.scaffold00002 142955 1 C T scaffold794 ScafM SNP 0001.scaffold00002 142988 1 G C scaffold794 ScafM SNP 0001.scaffold00002 143001 1 G A scaffold794 ScafM SNP 0001.scaffold00002 143007 1 A G scaffold794 ScafM SNP 0001.scaffold00002 143016 1 G A scaffold794 ScafM SNP 0001.scaffold00002 143026 1 T G scaffold794 ScafM SNP 0001.scaffold00002 143029 1 T C scaffold794 ScafM SNP 0001.scaffold00002 143031 1 G A scaffold794 ScafM SNP 0001.scaffold00002 143134 1 T C scaffold794 ScafM SNP 0001.scaffold00002 143138 1 G A scaffold794 Both SNP 0001.scaffold00002 143301 1 C T scaffold794 Both SNP 0001.scaffold00002 143698 1 G A scaffold794 Both SNP 0001.scaffold00002 143752 1 G A scaffold794 ReadM INDEL 0001.scaffold00002 143974 1 T . - Both SNP 0001.scaffold00002 144126 1 G T scaffold794 Both SNP 0001.scaffold00002 144130 1 G C scaffold794 Both SNP 0001.scaffold00002 144162 1 G T scaffold794 Both SNP 0001.scaffold00002 144211 1 G A scaffold794 Both SNP 0001.scaffold00002 144309 1 C A scaffold794 Both INDEL 0001.scaffold00002 144327 1 . A scaffold794 Both SNP 0001.scaffold00002 144351 1 T C scaffold794 ReadM SNP 0001.scaffold00002 144415 1 A G - ReadM SNP 0001.scaffold00002 144437 1 T C - ReadM INDEL 0001.scaffold00002 144489 1 . T - ReadM SNP 0001.scaffold00002 144527 1 T C - ReadM SNP 0001.scaffold00002 144594 1 A G - ReadM SNP 0001.scaffold00002 144692 1 C T - ReadM SNP 0001.scaffold00002 144713 1 T G - ReadM SNP 0001.scaffold00002 144720 1 C A - ReadM SNP 0001.scaffold00002 144769 1 A T - ReadM SNP 0001.scaffold00002 144835 1 C T - ReadM SNP 0001.scaffold00002 144936 1 T A - ReadM SNP 0001.scaffold00002 145018 1 A T - ReadM INDEL 0001.scaffold00002 145070 2 TC .. - ReadM SNP 0001.scaffold00002 145243 1 G A - ReadM SNP 0001.scaffold00002 145265 1 T A - ReadM SNP 0001.scaffold00002 145297 1 A G - ReadM SNP 0001.scaffold00002 145612 1 C T - ReadM SNP 0001.scaffold00002 145816 1 G T - ReadM SNP 0001.scaffold00002 145854 1 C T - ReadM SNP 0001.scaffold00002 145998 1 A G - ReadM SNP 0001.scaffold00002 146008 1 G A - ReadM SNP 0001.scaffold00002 146032 1 A T - Both SNP 0001.scaffold00002 146094 1 A G scaffold794 Both SNP 0001.scaffold00002 146144 1 T C scaffold794 Both SNP 0001.scaffold00002 146204 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 146592 4 .... TGTT scaffold794 ScafM SNP 0001.scaffold00002 146593 1 C T scaffold794 Both SNP 0001.scaffold00002 147380 1 T C scaffold794 Both SNP 0001.scaffold00002 147492 1 T G scaffold794 Both SNP 0001.scaffold00002 147600 1 T C scaffold794 Both SNP 0001.scaffold00002 147622 1 T A scaffold794 Both INDEL 0001.scaffold00002 147690 1 A . scaffold794 Both SNP 0001.scaffold00002 147757 1 A G scaffold794 Both SNP 0001.scaffold00002 147768 1 G A scaffold794 Both INDEL 0001.scaffold00002 147787 1 G . scaffold794 Both SNP 0001.scaffold00002 147813 1 T C scaffold794 Both SNP 0001.scaffold00002 147847 1 T C scaffold794 ReadM INDEL 0001.scaffold00002 147949 1 T . - ScafM SNP 0001.scaffold00002 148014 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148022 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148051 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 148079 3 ... GTG scaffold794 ScafM SNP 0001.scaffold00002 148081 1 A G scaffold794 ScafM SNP 0001.scaffold00002 148083 3 CAT GGG scaffold794 ScafM INDEL 0001.scaffold00002 148087 1 . A scaffold794 ScafM SNP 0001.scaffold00002 148089 2 TT AG scaffold794 ScafM SNP 0001.scaffold00002 148094 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148408 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148419 1 G T scaffold794 ScafM SNP 0001.scaffold00002 148428 1 T C scaffold794 ScafM SNP 0001.scaffold00002 148452 1 C A scaffold794 ScafM SNP 0001.scaffold00002 148461 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148472 1 C T scaffold794 ScafM SNP 0001.scaffold00002 148530 1 G A scaffold794 ScafM SNP 0001.scaffold00002 148562 1 G T scaffold794 ScafM INDEL 0001.scaffold00002 148603 7 ....... TTCCCAA scaffold794 ScafM SNP 0001.scaffold00002 148625 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 149788 1 T . scaffold794 ScafM SNP 0001.scaffold00002 149817 1 G C scaffold794 ScafM SNP 0001.scaffold00002 149933 1 A T scaffold794 ScafM SNP 0001.scaffold00002 149937 1 A T scaffold794 ScafM SNP 0001.scaffold00002 149970 1 T A scaffold794 ScafM SNP 0001.scaffold00002 149987 1 T A scaffold794 ScafM SNP 0001.scaffold00002 150014 2 TT AA scaffold794 ScafM SNP 0001.scaffold00002 150085 1 G A scaffold794 ScafM SNP 0001.scaffold00002 150114 2 TT AG scaffold794 ScafM SNP 0001.scaffold00002 150141 1 A G scaffold794 ScafM SNP 0001.scaffold00002 150391 1 G A scaffold794 ScafM SNP 0001.scaffold00002 150408 1 T C scaffold794 ScafM SNP 0001.scaffold00002 154911 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 154922 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 154930 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 154935 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 154947 2 AA GT scaffold1026 ScafM SNP 0001.scaffold00002 154962 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 154988 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 154997 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 155006 1 G T scaffold1026 ScafM SNP 0001.scaffold00002 155020 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 155025 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 155061 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155070 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155077 1 C G scaffold1026 ScafM SNP 0001.scaffold00002 155082 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155084 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 155098 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 155102 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 155105 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155115 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 155118 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 155130 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 155133 1 G C scaffold1026 ScafM SNP 0001.scaffold00002 155141 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 155147 1 T A scaffold1026 ScafM SNP 0001.scaffold00002 155157 2 GA AG scaffold1026 ScafM SNP 0001.scaffold00002 155161 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 155177 2 GG AA scaffold1026 ScafM SNP 0001.scaffold00002 155181 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155190 1 G T scaffold1026 ScafM SNP 0001.scaffold00002 155205 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155221 1 A C scaffold1026 ScafM SNP 0001.scaffold00002 155248 1 C A scaffold1026 ScafM SNP 0001.scaffold00002 155252 1 T G scaffold1026 ScafM SNP 0001.scaffold00002 155272 1 G C scaffold1026 ScafM SNP 0001.scaffold00002 155274 1 C T scaffold1026 ScafM SNP 0001.scaffold00002 155278 1 T C scaffold1026 ScafM SNP 0001.scaffold00002 155284 1 A C scaffold1026 ScafM SNP 0001.scaffold00002 155287 1 A G scaffold1026 ScafM SNP 0001.scaffold00002 155310 1 G A scaffold1026 ScafM SNP 0001.scaffold00002 155315 1 C A scaffold1026 ScafM SNP 0001.scaffold00002 155330 1 T C scaffold1026 ScafM INDEL 0001.scaffold00002 155335 1 . T scaffold1026 ScafM SNP 0001.scaffold00002 155340 1 T G scaffold1026 ScafM SNP 0001.scaffold00002 155499 1 C T scaffold794 ScafM SNP 0001.scaffold00002 155502 1 C T scaffold794 ScafM SNP 0001.scaffold00002 155505 1 T C scaffold794 ScafM SNP 0001.scaffold00002 155507 2 TT CC scaffold794 ScafM SNP 0001.scaffold00002 155510 1 C A scaffold794 ScafM SNP 0001.scaffold00002 155536 1 C A scaffold794 ScafM SNP 0001.scaffold00002 155555 1 A G scaffold794 ScafM SNP 0001.scaffold00002 155562 1 A G scaffold794 ScafM SNP 0001.scaffold00002 155565 2 TG GT scaffold794 ScafM SNP 0001.scaffold00002 155594 1 T C scaffold794 ScafM SNP 0001.scaffold00002 155623 1 T C scaffold794 ScafM SNP 0001.scaffold00002 155625 1 G A scaffold794 ScafM SNP 0001.scaffold00002 155637 1 T A scaffold794 ScafM INDEL 0001.scaffold00002 155649 1 A . scaffold794 ScafM INDEL 0001.scaffold00002 155652 1 . G scaffold794 ScafM SNP 0001.scaffold00002 155657 2 AG TA scaffold794 ScafM SNP 0001.scaffold00002 155665 1 G C scaffold794 ScafM SNP 0001.scaffold00002 155676 1 G C scaffold794 ScafM SNP 0001.scaffold00002 155711 1 T G scaffold794 ScafM SNP 0001.scaffold00002 155857 1 T C scaffold794 ScafM SNP 0001.scaffold00002 155932 1 G A scaffold794 ScafM SNP 0001.scaffold00002 155946 1 C T scaffold794 ScafM SNP 0001.scaffold00002 155952 1 T C scaffold794 ScafM SNP 0001.scaffold00002 155991 1 G A scaffold794 ScafM SNP 0001.scaffold00002 156015 2 TT CC scaffold794 ScafM SNP 0001.scaffold00002 156019 1 T C scaffold794 ScafM SNP 0001.scaffold00002 156045 1 G A scaffold794 ScafM SNP 0001.scaffold00002 156344 2 CG TT scaffold794 ScafM SNP 0001.scaffold00002 156362 1 A T scaffold794 ScafM SNP 0001.scaffold00002 156367 1 A G scaffold794 ScafM SNP 0001.scaffold00002 156427 1 T C scaffold794 ScafM SNP 0001.scaffold00002 156447 1 T A scaffold794 ScafM SNP 0001.scaffold00002 156451 1 A G scaffold794 ScafM SNP 0001.scaffold00002 156456 1 A C scaffold794 ScafM SNP 0001.scaffold00002 156473 1 G A scaffold794 ScafM SNP 0001.scaffold00002 156480 1 C A scaffold794 ScafM SNP 0001.scaffold00002 156507 1 T C scaffold794 ScafM SNP 0001.scaffold00002 156534 1 T G scaffold794 ScafM SNP 0001.scaffold00002 156561 1 C T scaffold794 ScafM SNP 0001.scaffold00002 156579 1 C T scaffold794 ScafM SNP 0001.scaffold00002 156590 1 A G scaffold794 ScafM SNP 0001.scaffold00002 156599 2 CC TA scaffold794 ScafM INDEL 0001.scaffold00002 156684 7 ....... AATTTAG scaffold794 ScafM INDEL 0001.scaffold00002 156687 7 ....... ACGAAGA scaffold794 ScafM INDEL 0001.scaffold00002 156688 5 ..... ACTAA scaffold794 ScafM INDEL 0001.scaffold00002 156690 4 .... GGGG scaffold794 ScafM SNP 0001.scaffold00002 156693 1 T G scaffold794 ScafM SNP 0001.scaffold00002 156718 1 G A scaffold794 ScafM SNP 0001.scaffold00002 156726 1 G A scaffold794 ScafM SNP 0001.scaffold00002 156806 1 A T scaffold794 ScafM SNP 0001.scaffold00002 156810 1 A T scaffold794 ScafM SNP 0001.scaffold00002 156827 1 T C scaffold794 ScafM SNP 0001.scaffold00002 156832 1 A C scaffold794 ScafM SNP 0001.scaffold00002 156854 1 G T scaffold794 ScafM SNP 0001.scaffold00002 156863 1 C A scaffold794 ScafM SNP 0001.scaffold00002 156865 1 A G scaffold794 ScafM SNP 0001.scaffold00002 156867 1 T G scaffold794 ScafM SNP 0001.scaffold00002 156890 1 C A scaffold794 ScafM SNP 0001.scaffold00002 156937 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 156940 1 C . scaffold794 ScafM SNP 0001.scaffold00002 156976 1 G T scaffold794 ScafM INDEL 0001.scaffold00002 161480 2 .. TC scaffold794 ScafM SNP 0001.scaffold00002 161549 1 C A scaffold794 ScafM SNP 0001.scaffold00002 161590 1 T C scaffold794 ScafM SNP 0001.scaffold00002 161598 1 G A scaffold794 ScafM SNP 0001.scaffold00002 161634 1 C A scaffold794 ScafM INDEL 0001.scaffold00002 161670 1 . T scaffold794 ScafM SNP 0001.scaffold00002 161683 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 161690 3 AAA ... scaffold794 ScafM SNP 0001.scaffold00002 161703 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 161736 5 ..... AGGCC scaffold794 ScafM SNP 0001.scaffold00002 161756 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 161774 10 CCCATGGACC .......... scaffold794 ScafM INDEL 0001.scaffold00002 161786 2 GC .. scaffold794 ScafM SNP 0001.scaffold00002 161799 1 A G scaffold794 ScafM SNP 0001.scaffold00002 161812 1 G A scaffold794 ScafM SNP 0001.scaffold00002 161817 1 A G scaffold794 ScafM SNP 0001.scaffold00002 161823 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 161837 7 CGACCAG ....... scaffold794 ScafM INDEL 0001.scaffold00002 161845 5 TTCTT ..... scaffold794 ScafM SNP 0001.scaffold00002 161861 1 A T scaffold794 ScafM INDEL 0001.scaffold00002 161882 13 GTTTCCTGACCCG ............. scaffold794 Both SNP 0001.scaffold00002 161949 1 G A scaffold794 ScafM SNP 0001.scaffold00002 161993 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 162005 1 . C scaffold794 ScafM INDEL 0001.scaffold00002 162009 1 A . scaffold794 Both SNP 0001.scaffold00002 162047 1 T A scaffold794 ScafM SNP 0001.scaffold00002 162100 1 A T scaffold794 Both INDEL 0001.scaffold00002 162105 1 . G scaffold794 Both SNP 0001.scaffold00002 162134 1 C T scaffold794 ScafM SNP 0001.scaffold00002 162224 1 G A scaffold794 ScafM SNP 0001.scaffold00002 162233 1 G T scaffold794 ScafM SNP 0001.scaffold00002 162260 1 A G scaffold794 Both INDEL 0001.scaffold00002 162334 1 . C scaffold794 ReadM SNP 0001.scaffold00002 162359 1 A T - ReadM SNP 0001.scaffold00002 162398 1 T C - ReadM SNP 0001.scaffold00002 162429 1 A G - ReadM SNP 0001.scaffold00002 162470 1 A G - ReadM INDEL 0001.scaffold00002 162522 1 G . - ReadM SNP 0001.scaffold00002 162611 1 T C - ReadM SNP 0001.scaffold00002 162815 1 T C - ReadM SNP 0001.scaffold00002 162859 1 G A - ReadM INDEL 0001.scaffold00002 163018 3 ... ATT - ReadM SNP 0001.scaffold00002 163094 1 C T - ReadM SNP 0001.scaffold00002 163128 1 T C - ReadM SNP 0001.scaffold00002 163207 1 A G - ScafM SNP 0001.scaffold00002 170268 1 A G scaffold794 ScafM SNP 0001.scaffold00002 170513 1 C T scaffold794 ScafM SNP 0001.scaffold00002 170549 1 T C scaffold794 ScafM SNP 0001.scaffold00002 170571 1 A C scaffold794 ScafM SNP 0001.scaffold00002 170583 1 T A scaffold794 ScafM SNP 0001.scaffold00002 170615 1 C T scaffold794 ScafM SNP 0001.scaffold00002 170617 1 A C scaffold794 ScafM SNP 0001.scaffold00002 170632 1 T A scaffold794 ScafM SNP 0001.scaffold00002 170637 1 G A scaffold794 ScafM SNP 0001.scaffold00002 170656 1 G A scaffold794 ScafM SNP 0001.scaffold00002 170705 1 A G scaffold794 ScafM SNP 0001.scaffold00002 170727 1 C T scaffold794 ScafM SNP 0001.scaffold00002 170739 1 A G scaffold794 ScafM SNP 0001.scaffold00002 170772 1 G T scaffold794 ReadM SNP 0001.scaffold00002 170797 1 C T - ReadM INDEL 0001.scaffold00002 170816 1 A . - ReadM SNP 0001.scaffold00002 170883 1 T G - ReadM SNP 0001.scaffold00002 170952 1 C T - ReadM SNP 0001.scaffold00002 171018 1 G A - ReadM SNP 0001.scaffold00002 171073 1 T C - ReadM SNP 0001.scaffold00002 171081 1 C T - ReadM INDEL 0001.scaffold00002 171160 1 . A - ReadM SNP 0001.scaffold00002 171267 1 A G - ReadM SNP 0001.scaffold00002 171323 1 C T - ReadM SNP 0001.scaffold00002 171371 1 G A - ReadM SNP 0001.scaffold00002 171438 1 A G - Both SNP 0001.scaffold00002 171480 1 A G scaffold794 ScafM SNP 0001.scaffold00002 171506 1 C G scaffold794 ScafM SNP 0001.scaffold00002 171517 1 A G scaffold794 ScafM SNP 0001.scaffold00002 171527 1 T C scaffold794 ScafM SNP 0001.scaffold00002 171543 2 AT TG scaffold794 ScafM SNP 0001.scaffold00002 171562 1 T C scaffold794 ScafM SNP 0001.scaffold00002 171566 1 C T scaffold794 ScafM SNP 0001.scaffold00002 171580 1 G A scaffold794 ScafM SNP 0001.scaffold00002 171623 1 T A scaffold794 ScafM SNP 0001.scaffold00002 171759 1 A G scaffold794 ScafM SNP 0001.scaffold00002 171764 1 T G scaffold794 ScafM SNP 0001.scaffold00002 171778 1 A G scaffold794 ScafM SNP 0001.scaffold00002 171786 1 A G scaffold794 ScafM SNP 0001.scaffold00002 171848 1 A T scaffold794 ScafM SNP 0001.scaffold00002 171850 1 G A scaffold794 ScafM INDEL 0001.scaffold00002 171857 1 . C scaffold794 ScafM SNP 0001.scaffold00002 171901 1 T C scaffold794 ScafM SNP 0001.scaffold00002 172731 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 172744 2 .. TG scaffold794 ScafM SNP 0001.scaffold00002 172792 1 A C scaffold794 ScafM SNP 0001.scaffold00002 172875 1 C G scaffold794 ScafM SNP 0001.scaffold00002 172881 1 A G scaffold794 ScafM INDEL 0001.scaffold00002 172899 1 . A scaffold794 ScafM SNP 0001.scaffold00002 172932 1 G A scaffold794 ScafM SNP 0001.scaffold00002 172934 1 T C scaffold794 ScafM SNP 0001.scaffold00002 173037 1 G A scaffold794 Both SNP 0001.scaffold00002 173202 1 T C scaffold794 Both SNP 0001.scaffold00002 173251 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 173278 19 GCTTGGGCGCTCCATACAT ................... scaffold794 ScafM INDEL 0001.scaffold00002 173937 1 . T scaffold794 ScafM SNP 0001.scaffold00002 173977 1 A G scaffold794 ScafM SNP 0001.scaffold00002 173985 1 A G scaffold794 ScafM SNP 0001.scaffold00002 173992 1 A T scaffold794 ScafM SNP 0001.scaffold00002 174004 1 T C scaffold794 ScafM SNP 0001.scaffold00002 174058 1 T C scaffold794 ScafM INDEL 0001.scaffold00002 174070 1 C . scaffold794 ScafM SNP 0001.scaffold00002 174090 1 A G scaffold794 ScafM SNP 0001.scaffold00002 174093 1 T C scaffold794 ScafM SNP 0001.scaffold00002 174118 1 A T scaffold794 ScafM SNP 0001.scaffold00002 174126 1 C T scaffold794 ScafM SNP 0001.scaffold00002 174131 1 A C scaffold794 ScafM SNP 0001.scaffold00002 174135 1 C A scaffold794 ScafM SNP 0001.scaffold00002 174179 1 C T scaffold794 ScafM INDEL 0001.scaffold00002 174194 1 . A scaffold794 ScafM SNP 0001.scaffold00002 174209 1 C A scaffold794 ScafM SNP 0001.scaffold00002 174476 1 T G scaffold794 ScafM SNP 0001.scaffold00002 174505 1 G T scaffold794 ScafM SNP 0001.scaffold00002 174535 1 G T scaffold794 ScafM INDEL 0001.scaffold00002 174627 1 C . scaffold794 ScafM SNP 0001.scaffold00002 174866 1 C A scaffold794 ScafM SNP 0001.scaffold00002 174933 1 C T scaffold794 ScafM SNP 0001.scaffold00002 175068 1 T C scaffold794 ScafM SNP 0001.scaffold00002 176204 1 T C scaffold509 ScafM SNP 0001.scaffold00002 176206 1 A T scaffold509 ScafM SNP 0001.scaffold00002 176219 1 A C scaffold509 ScafM SNP 0001.scaffold00002 176250 1 A G scaffold509 ScafM INDEL 0001.scaffold00002 176258 11 ........... ATAAGAAGCCA scaffold509 ScafM SNP 0001.scaffold00002 176284 1 C T scaffold509 ScafM INDEL 0001.scaffold00002 176286 1 . T scaffold509 ScafM INDEL 0001.scaffold00002 176297 3 ..T AAA scaffold509 ScafM SNP 0001.scaffold00002 176300 1 G T scaffold509 ScafM SNP 0001.scaffold00002 176341 1 T C scaffold509 ScafM SNP 0001.scaffold00002 176354 1 C T scaffold509 ScafM SNP 0001.scaffold00002 176383 1 C T scaffold509 ScafM SNP 0001.scaffold00002 176540 1 G A scaffold509 Both INDEL 0001.scaffold00002 176580 1 . G scaffold509 Both SNP 0001.scaffold00002 176592 1 C T scaffold509 Both SNP 0001.scaffold00002 176606 1 T C scaffold509 ScafM INDEL 0001.scaffold00002 176775 2 .. AC scaffold509 ScafM INDEL 0001.scaffold00002 176776 1 . A scaffold509 ScafM INDEL 0001.scaffold00002 176779 21 ..................... AGTTTATTAAAAATCAGGTAA scaffold509 ScafM INDEL 0001.scaffold00002 176782 2 .. GA scaffold509 ScafM INDEL 0001.scaffold00002 176783 2 .. CC scaffold509 ScafM INDEL 0001.scaffold00002 176785 17 ................. ATCTAACATCTAAACTC scaffold509 ScafM INDEL 0001.scaffold00002 176786 7 ....... AAACGGG scaffold509 ScafM INDEL 0001.scaffold00002 176808 1 . G scaffold509 Both SNP 0001.scaffold00002 177081 1 C G scaffold509 ScafM INDEL 0001.scaffold00002 177404 1 . T scaffold509 Both SNP 0001.scaffold00002 179634 1 A G scaffold509 Both SNP 0001.scaffold00002 179943 1 G T scaffold509 ScafM INDEL 0001.scaffold00002 180811 8 TGAAGTTT ........ scaffold509 Both SNP 0001.scaffold00002 180956 1 A G scaffold509 ScafM INDEL 0001.scaffold00002 181156 4 ATTT .... scaffold509 Both SNP 0001.scaffold00002 181181 1 T A scaffold509 ReadM SNP 0001.scaffold00002 181559 1 T C - Both SNP 0001.scaffold00002 181907 1 G T scaffold509 Both SNP 0001.scaffold00002 182502 1 C T scaffold509 Both SNP 0001.scaffold00002 182946 1 C T scaffold509 ScafM SNP 0001.scaffold00002 183218 1 A T scaffold509 ScafM SNP 0001.scaffold00002 183222 1 A T scaffold509 ScafM SNP 0001.scaffold00002 183225 1 A T scaffold509 Both SNP 0001.scaffold00002 183382 1 A G scaffold509 Both SNP 0001.scaffold00002 184108 1 C A scaffold509 Both SNP 0001.scaffold00002 184372 1 C T scaffold509 Both SNP 0001.scaffold00002 184675 1 C T scaffold509 Both SNP 0001.scaffold00002 185207 1 C T scaffold509 Both SNP 0001.scaffold00002 185483 1 T G scaffold509 Both SNP 0001.scaffold00002 186036 1 G A scaffold509 ReadM SNP 0001.scaffold00002 186583 1 G A - ReadM SNP 0001.scaffold00002 186620 1 G A - ReadM SNP 0001.scaffold00002 187262 1 A T - Both SNP 0001.scaffold00002 187605 1 A G scaffold509 Both SNP 0001.scaffold00002 187976 1 A T scaffold509 Both SNP 0001.scaffold00002 188412 1 G A scaffold509 Both SNP 0001.scaffold00002 188775 1 G T scaffold509 Both INDEL 0001.scaffold00002 188830 3 ... GTC scaffold509 Both SNP 0001.scaffold00002 188912 1 A G scaffold509 Both SNP 0001.scaffold00002 189126 1 A T scaffold509 ScafM SNP 0001.scaffold00002 189625 1 T C scaffold509 ScafM INDEL 0001.scaffold00002 189706 6 ...... GGGGGG scaffold509 ScafM SNP 0001.scaffold00002 190351 1 C T scaffold509 Both SNP 0001.scaffold00002 191008 1 A G scaffold509 Both SNP 0001.scaffold00002 191041 1 G T scaffold509 Both SNP 0001.scaffold00002 191377 1 G T scaffold509 Both INDEL 0001.scaffold00002 191572 2 TG .. scaffold509 ReadM SNP 0001.scaffold00002 192356 1 T C - ReadM INDEL 0001.scaffold00002 192380 1 . A - ScafM SNP 0001.scaffold00002 194423 2 GC AT scaffold509 Both SNP 0001.scaffold00002 195836 1 T C scaffold509 Both SNP 0001.scaffold00002 196972 1 T A scaffold509 Both SNP 0001.scaffold00002 197034 1 T C scaffold509 Both SNP 0001.scaffold00002 197271 1 A G scaffold509 ReadM SNP 0001.scaffold00002 197519 1 A G - ReadM SNP 0001.scaffold00002 197734 1 T C - ReadM SNP 0001.scaffold00002 197773 1 G A - ReadM SNP 0001.scaffold00002 197903 1 T A - ReadM SNP 0001.scaffold00002 197923 1 G A - ReadM SNP 0001.scaffold00002 198072 1 C T - ReadM SNP 0001.scaffold00002 198168 1 C T - ReadM SNP 0001.scaffold00002 198685 1 C T - ScafM INDEL 0001.scaffold00002 198951 1 . T scaffold509 ScafM SNP 0001.scaffold00002 199429 1 G T scaffold509 ScafM INDEL 0001.scaffold00002 199516 9 TAGAAAAAG ......... scaffold509 ScafM SNP 0001.scaffold00002 199563 1 T A scaffold509 ScafM SNP 0001.scaffold00002 199590 1 A G scaffold509 ScafM SNP 0001.scaffold00002 199604 1 A G scaffold509 ScafM SNP 0001.scaffold00002 199608 1 T A scaffold509 ScafM INDEL 0001.scaffold00002 199620 2 TT .. scaffold509 ScafM SNP 0001.scaffold00002 199941 1 T A scaffold509 ScafM SNP 0001.scaffold00002 200372 1 C A scaffold509 ScafM SNP 0001.scaffold00002 200413 1 T A scaffold509 ScafM INDEL 0001.scaffold00002 200481 1 . A scaffold509 ScafM SNP 0001.scaffold00002 200529 1 A T scaffold509 ScafM INDEL 0001.scaffold00002 200552 64 ................................................................ ACAAACATAAATTTGTAATACACTTGTTGGAATTGCCAACATTATATCTCTTTATTTAATTGAT scaffold509 ScafM SNP 0001.scaffold00002 200787 1 G A scaffold509 ScafM SNP 0001.scaffold00002 200832 1 A C scaffold509 ScafM SNP 0001.scaffold00002 201005 1 G T scaffold509 ScafM SNP 0001.scaffold00002 201016 1 T C scaffold509 ReadM SNP 0001.scaffold00002 201240 1 C T - ReadM SNP 0001.scaffold00002 201762 1 A G - ReadM SNP 0001.scaffold00002 203001 1 A G - ReadM SNP 0001.scaffold00002 203141 1 T C - ReadM INDEL 0001.scaffold00002 203202 3 AAC ... - ReadM SNP 0001.scaffold00002 203659 1 A C - ReadM SNP 0001.scaffold00002 203739 1 G A - ReadM SNP 0001.scaffold00002 203786 1 G A - ReadM SNP 0001.scaffold00002 203959 1 T C - ReadM SNP 0001.scaffold00002 204056 1 G A - ReadM SNP 0001.scaffold00002 204095 1 C A - ScafM SNP 0001.scaffold00002 204439 1 G A scaffold509 ScafM SNP 0001.scaffold00002 204646 1 A G scaffold509 Both SNP 0001.scaffold00002 204871 1 A G scaffold509 ReadM SNP 0001.scaffold00002 204898 1 G T - ReadM SNP 0001.scaffold00002 204927 1 G A - ReadM INDEL 0001.scaffold00002 205273 2 .. AG - ReadM SNP 0001.scaffold00002 205463 1 A G - ReadM SNP 0001.scaffold00002 205951 1 T C - Both INDEL 0001.scaffold00002 206540 1 T . scaffold509 Both SNP 0001.scaffold00002 206588 1 C T scaffold509 ReadM SNP 0001.scaffold00002 207200 1 C A - ReadM SNP 0001.scaffold00002 207209 1 A G - ReadM SNP 0001.scaffold00002 207363 1 T C - ReadM SNP 0001.scaffold00002 207416 1 G A - ReadM SNP 0001.scaffold00002 207440 1 T C - ReadM SNP 0001.scaffold00002 207651 1 G A - ReadM SNP 0001.scaffold00002 207657 1 C T - ReadM SNP 0001.scaffold00002 207895 1 C T - ReadM SNP 0001.scaffold00002 207948 1 C T - ReadM SNP 0001.scaffold00002 207976 1 A T - ReadM SNP 0001.scaffold00002 208063 1 G A - ReadM SNP 0001.scaffold00002 209086 1 T A - ReadM SNP 0001.scaffold00002 209172 1 C T - ReadM SNP 0001.scaffold00002 209341 1 G A - ReadM SNP 0001.scaffold00002 209776 1 G A - ReadM SNP 0001.scaffold00002 210307 1 G A - ReadM INDEL 0001.scaffold00002 210437 3 ATA ... - ReadM SNP 0001.scaffold00002 212071 1 C T - ReadM SNP 0001.scaffold00002 212284 1 G C - ReadM SNP 0001.scaffold00002 212774 1 C T - ReadM SNP 0001.scaffold00002 213181 1 A T - ReadM SNP 0001.scaffold00002 213321 1 A G - ReadM SNP 0001.scaffold00002 213514 1 C T - ReadM SNP 0001.scaffold00002 213638 1 T C - Both SNP 0001.scaffold00002 213798 1 G A scaffold509 Both SNP 0001.scaffold00002 213937 1 T G scaffold509 Both SNP 0001.scaffold00002 214166 1 A G scaffold509 ReadM SNP 0001.scaffold00002 214481 1 C T - ScafM INDEL 0001.scaffold00002 214757 11 ........... AAAAAAAAAAA scaffold509 ScafM INDEL 0001.scaffold00002 214766 1 . T scaffold509 ReadM SNP 0001.scaffold00002 215013 1 T G - ReadM SNP 0001.scaffold00002 215309 1 A G - ReadM SNP 0001.scaffold00002 215650 1 G A - ReadM SNP 0001.scaffold00002 216036 1 C T - ScafM INDEL 0001.scaffold00002 216395 1 . A scaffold509 ReadM SNP 0001.scaffold00002 217283 1 A C - ReadM SNP 0001.scaffold00002 217390 1 C T - ReadM SNP 0001.scaffold00002 217420 1 T C - ReadM INDEL 0001.scaffold00002 217437 1 T . - ReadM INDEL 0001.scaffold00002 217478 1 A . - ScafM SNP 0001.scaffold00002 217750 1 C G scaffold509 ScafM SNP 0001.scaffold00002 217754 2 GG CC scaffold509 ScafM SNP 0001.scaffold00002 217771 1 G C scaffold509 ScafM SNP 0001.scaffold00002 217775 2 CC GG scaffold509 ScafM INDEL 0002.scaffold00003 47808 4 AAAA .... scaffold755 ScafM SNP 0002.scaffold00003 47860 1 T C scaffold755 ScafM SNP 0002.scaffold00003 47863 1 G C scaffold755 ScafM INDEL 0002.scaffold00003 47865 6 TGAATT ...... scaffold755 ScafM INDEL 0002.scaffold00003 47872 1 G . scaffold755 ScafM SNP 0002.scaffold00003 47902 1 T A scaffold755 ScafM SNP 0002.scaffold00003 47930 1 C T scaffold755 ScafM SNP 0002.scaffold00003 47935 1 C T scaffold755 ScafM SNP 0002.scaffold00003 48137 1 T C scaffold755 ScafM INDEL 0002.scaffold00003 84123 6 GGTGCT ...... scaffold5063 ScafM INDEL 0002.scaffold00003 94752 1 C . scaffold4214 ScafM SNP 0002.scaffold00003 100695 1 A T scaffold5063 ScafM INDEL 0002.scaffold00003 102034 1 T . scaffold5063 ScafM SNP 0002.scaffold00003 114867 1 T C scaffold5063 ScafM SNP 0002.scaffold00003 114869 1 C G scaffold5063 ScafM SNP 0002.scaffold00003 115609 1 A G scaffold5063 ScafM SNP 0002.scaffold00003 115666 1 G T scaffold5063 ScafM SNP 0002.scaffold00003 115725 1 G A scaffold5063 ScafM SNP 0002.scaffold00003 115736 1 C T scaffold5063 ScafM INDEL 0002.scaffold00003 135662 1 . A scaffold39045 ReadM INDEL 0002.scaffold00003 136541 1 T . - ScafM SNP 0002.scaffold00003 154159 1 C A scaffold8082 ScafM SNP 0002.scaffold00003 157436 1 C G scaffold8082 ScafM SNP 0002.scaffold00003 159367 1 G A scaffold8082 ScafM SNP 0002.scaffold00003 159389 1 G C scaffold8082 ScafM INDEL 0002.scaffold00003 159413 1 G . scaffold8082 ScafM SNP 0002.scaffold00003 159419 1 T C scaffold8082 ScafM SNP 0002.scaffold00003 159538 1 A T scaffold8082 ScafM SNP 0002.scaffold00003 159540 1 A G scaffold8082 ScafM SNP 0002.scaffold00003 162418 2 GA AG scaffold8082 ScafM INDEL 0002.scaffold00003 169553 2 .. AA scaffold8082 ScafM SNP 0002.scaffold00003 190164 2 TC CT scaffold58269 ScafM SNP 0002.scaffold00003 190189 1 A G scaffold58269 ScafM SNP 0002.scaffold00003 192973 1 T G scaffold20272 ScafM SNP 0002.scaffold00003 193054 1 G C scaffold20272 ScafM SNP 0002.scaffold00003 193122 1 T A scaffold20272 ScafM SNP 0002.scaffold00003 193168 1 A G scaffold20272 ScafM SNP 0002.scaffold00003 193240 1 A C scaffold20272 ScafM SNP 0002.scaffold00003 193265 1 C A scaffold20272 ScafM SNP 0002.scaffold00003 193332 1 A G scaffold20272 ScafM SNP 0002.scaffold00003 193354 1 A C scaffold20272 ScafM INDEL 0002.scaffold00003 193389 1 . T scaffold20272 ScafM SNP 0002.scaffold00003 193427 1 C T scaffold20272 ScafM SNP 0002.scaffold00003 197902 1 G A scaffold12026 ScafM SNP 0002.scaffold00003 197967 2 GG AA scaffold12026 ScafM SNP 0002.scaffold00003 197979 1 C G scaffold12026 ScafM SNP 0002.scaffold00003 197990 1 T G scaffold12026 ScafM SNP 0002.scaffold00003 197993 1 A G scaffold12026 ScafM SNP 0002.scaffold00003 197998 1 T G scaffold12026 ScafM SNP 0002.scaffold00003 198037 1 G A scaffold12026 ScafM INDEL 0002.scaffold00003 198058 2 .T GA scaffold12026 ScafM SNP 0002.scaffold00003 198061 1 G T scaffold12026 ScafM SNP 0002.scaffold00003 198073 1 C T scaffold12026 ScafM INDEL 0002.scaffold00003 198077 1 A . scaffold12026 ScafM SNP 0002.scaffold00003 198079 1 C G scaffold12026 ScafM SNP 0002.scaffold00003 198084 1 C A scaffold12026 ScafM SNP 0002.scaffold00003 198087 2 CC AT scaffold12026 ScafM SNP 0002.scaffold00003 198090 1 C A scaffold12026 ScafM SNP 0002.scaffold00003 198093 1 A G scaffold12026 ScafM INDEL 0002.scaffold00003 198098 2 CG .. scaffold12026 ScafM INDEL 0002.scaffold00003 198101 1 C . scaffold12026 ScafM SNP 0002.scaffold00003 198107 2 TA CC scaffold12026 ScafM INDEL 0002.scaffold00003 198112 1 . T scaffold12026 ScafM SNP 0002.scaffold00003 198123 1 G C scaffold12026 ScafM SNP 0002.scaffold00003 198132 1 C T scaffold12026 ScafM SNP 0002.scaffold00003 228789 1 G T scaffold2909 ScafM SNP 0002.scaffold00003 228796 1 G T scaffold2909 ScafM INDEL 0002.scaffold00003 229228 1 . A scaffold2909 ScafM SNP 0002.scaffold00003 231588 1 G A scaffold2909 ScafM INDEL 0002.scaffold00003 231596 26 AGGCCTCATGCATCTTAACTTTCCAA .......................... scaffold2909 ScafM SNP 0002.scaffold00003 239938 1 T G scaffold2909 ScafM SNP 0002.scaffold00003 263707 1 A T scaffold2909 ScafM INDEL 0002.scaffold00003 263725 1 . T scaffold2909 ScafM INDEL 0002.scaffold00003 305552 1 . G scaffold2909 ScafM SNP 0002.scaffold00003 307082 1 T G scaffold2909 ScafM INDEL 0002.scaffold00003 346588 3 ... AAA scaffold6308 ScafM INDEL 0002.scaffold00003 366232 1 . A scaffold6308 ScafM SNP 0002.scaffold00003 371991 1 C T scaffold7393 ScafM INDEL 0002.scaffold00003 372040 1 . G scaffold7393 ScafM INDEL 0002.scaffold00003 372045 7 ....... TGCAGCA scaffold7393 ScafM INDEL 0002.scaffold00003 372047 8 ........ TGTCGTCG scaffold7393 ReadM SNP 0002.scaffold00003 372913 1 T C - ReadM INDEL 0002.scaffold00003 386926 2 AG .. - ScafM SNP 0002.scaffold00003 386927 1 G A scaffold6931 ScafM INDEL 0002.scaffold00003 390542 8 ........ CACCTCCT scaffold6931 ReadM INDEL 0002.scaffold00003 410268 1 . T - ScafM INDEL 0002.scaffold00003 431290 1 . T scaffold6931 ScafM INDEL 0002.scaffold00003 431292 1 . A scaffold6931 ScafM SNP 0002.scaffold00003 433479 1 A G scaffold6931 ScafM SNP 0002.scaffold00003 486882 8 GCAGAGCA TTTTTTTT scaffold22224 ScafM SNP 0002.scaffold00003 486891 4 GAAG TTTT scaffold22224 ScafM INDEL 0002.scaffold00003 501626 4 .... ATCC scaffold22224 ScafM INDEL 0002.scaffold00003 507848 1 T . scaffold22224 ScafM INDEL 0002.scaffold00003 510966 1 . A scaffold2710 ScafM SNP 0002.scaffold00003 518703 2 TG GT scaffold2710 ScafM SNP 0002.scaffold00003 519297 2 AA GC scaffold2710 ScafM INDEL 0002.scaffold00003 527785 1 T . scaffold2710 ScafM SNP 0002.scaffold00003 530309 2 CT AA scaffold2710 ScafM INDEL 0002.scaffold00003 530311 6 ...... AAAAAA scaffold2710 ScafM SNP 0002.scaffold00003 534989 1 C T scaffold17296 Both SNP 0002.scaffold00003 549381 1 G A scaffold29932 ScafM INDEL 0002.scaffold00003 549461 23 AATTAGTATAAATTCTAGGGTTG ....................... scaffold29932 ScafM INDEL 0002.scaffold00003 549486 2 TT .. scaffold29932 ScafM INDEL 0002.scaffold00003 558799 11 TTTGTAACACA ........... scaffold29932 ScafM INDEL 0002.scaffold00003 559064 21 TTCTCTGACATAGGTACTTTC ..................... scaffold29932 ScafM SNP 0002.scaffold00003 567914 1 G C scaffold586 ScafM SNP 0002.scaffold00003 567917 1 C T scaffold586 ScafM SNP 0002.scaffold00003 567941 1 C T scaffold586 ScafM SNP 0002.scaffold00003 567960 1 C A scaffold586 ScafM SNP 0002.scaffold00003 569318 1 T C scaffold45032 ScafM SNP 0002.scaffold00003 569324 1 G A scaffold45032 ScafM SNP 0002.scaffold00003 569326 1 T C scaffold45032 ScafM SNP 0002.scaffold00003 569329 1 A C scaffold45032 ScafM SNP 0002.scaffold00003 569336 1 A C scaffold45032 ScafM SNP 0002.scaffold00003 569384 1 C A scaffold45032 ScafM SNP 0002.scaffold00003 569389 1 A C scaffold45032 ScafM INDEL 0002.scaffold00003 569447 2 .. AA scaffold45032 ScafM SNP 0002.scaffold00003 569465 1 C T scaffold45032 ScafM SNP 0002.scaffold00003 569643 1 G T scaffold24364 ScafM INDEL 0002.scaffold00003 569644 3 ... TAT scaffold24364 ScafM SNP 0002.scaffold00003 569651 1 C T scaffold24364 ScafM SNP 0002.scaffold00003 569745 1 T C scaffold24364 ReadM INDEL 0002.scaffold00003 591260 1 . T - ReadM INDEL 0002.scaffold00003 606614 1 A . - ScafM INDEL 0002.scaffold00003 624529 1 . A scaffold12339 ScafM SNP 0002.scaffold00003 626452 1 A G scaffold12339 ScafM INDEL 0002.scaffold00003 689968 7 ....... AATAATA scaffold15606 ScafM SNP 0002.scaffold00003 690001 1 C G scaffold15606 ScafM INDEL 0002.scaffold00003 698178 13 ............. GGGGGGGGGGGGG scaffold11137 ScafM INDEL 0002.scaffold00003 707311 1 C . scaffold11137 ScafM INDEL 0002.scaffold00003 707333 2 CT .. scaffold11137 ScafM SNP 0002.scaffold00003 740378 1 T C scaffold35263 ScafM INDEL 0002.scaffold00003 740391 1 . A scaffold35263 ScafM SNP 0002.scaffold00003 754915 1 C T scaffold22062 ScafM SNP 0002.scaffold00003 754921 1 C T scaffold22062 ScafM INDEL 0002.scaffold00003 754957 1 C . scaffold22062 ScafM SNP 0002.scaffold00003 798687 1 A T scaffold34337 ScafM SNP 0002.scaffold00003 798748 1 T C scaffold34337 ScafM SNP 0002.scaffold00003 806139 1 A G scaffold14659 ScafM SNP 0002.scaffold00003 806148 1 A T scaffold14659 ScafM INDEL 0002.scaffold00003 806150 1 . C scaffold14659 ScafM SNP 0002.scaffold00003 806212 1 G A scaffold14659 ScafM SNP 0002.scaffold00003 830456 1 T G scaffold14028 ScafM INDEL 0002.scaffold00003 848932 2 .. AA scaffold14028 ScafM INDEL 0002.scaffold00003 899390 8 ........ CCCCCCCA scaffold7178 ScafM SNP 0002.scaffold00003 899392 1 C A scaffold7178 ScafM INDEL 0002.scaffold00003 899565 1 . A scaffold7178 ReadM INDEL 0002.scaffold00003 916203 1 . A - ScafM SNP 0002.scaffold00003 919924 1 T C scaffold7178 ScafM INDEL 0002.scaffold00003 922671 12 ............ TGCTGCTTTTGT scaffold7178 ScafM INDEL 0002.scaffold00003 922674 14 .............. TATTGTTGTACTGC scaffold7178 ScafM INDEL 0002.scaffold00003 922679 29 ............................. TTGCTAATTTGCATAGCTATAATATATAA scaffold7178 ScafM INDEL 0002.scaffold00003 922681 5 ..... CTTCG scaffold7178 ScafM SNP 0002.scaffold00003 923890 1 A G scaffold7178 ScafM INDEL 0002.scaffold00003 924202 24 GGAAAGGAGAAGATACCAAAGGAG ........................ scaffold7178 ScafM SNP 0002.scaffold00003 924254 1 C T scaffold7178 ScafM SNP 0002.scaffold00003 945374 1 G A scaffold3251 ScafM INDEL 0002.scaffold00003 995533 2 AA .. scaffold3251 ScafM SNP 0002.scaffold00003 996512 2 AA TT scaffold3251 ScafM SNP 0002.scaffold00003 996515 2 AC TT scaffold3251 ScafM SNP 0002.scaffold00003 996519 1 A T scaffold3251 ScafM SNP 0002.scaffold00003 996523 1 A T scaffold3251 ScafM SNP 0002.scaffold00003 996525 1 G T scaffold3251 ScafM SNP 0002.scaffold00003 996527 1 A T scaffold3251 ScafM SNP 0002.scaffold00003 996530 2 AG TT scaffold3251 ScafM INDEL 0002.scaffold00003 996533 1 G . scaffold3251 ScafM INDEL 0002.scaffold00003 1007380 13 CATACATATCTAT ............. scaffold3251 ScafM INDEL 0002.scaffold00003 1007396 8 GGGGAATT ........ scaffold3251 ScafM INDEL 0002.scaffold00003 1007406 1 A . scaffold3251 ScafM INDEL 0002.scaffold00003 1007408 2 AG .. scaffold3251 ScafM SNP 0002.scaffold00003 1007411 1 T C scaffold3251 ScafM INDEL 0002.scaffold00003 1007414 3 ACC ... scaffold3251 ScafM INDEL 0002.scaffold00003 1027781 1 . A scaffold3251 ScafM SNP 0002.scaffold00003 1031066 1 A C scaffold2340 ScafM SNP 0002.scaffold00003 1031094 1 G A scaffold2340 ScafM SNP 0002.scaffold00003 1031238 1 C T scaffold2340 ScafM SNP 0002.scaffold00003 1031292 1 G A scaffold2340 ScafM SNP 0002.scaffold00003 1031348 1 A G scaffold2340 ScafM SNP 0002.scaffold00003 1031413 1 C T scaffold2340 ScafM SNP 0002.scaffold00003 1031447 1 G A scaffold2340 ScafM INDEL 0002.scaffold00003 1060379 1 . G scaffold4320 ScafM INDEL 0002.scaffold00003 1061946 1 . A scaffold4320 ScafM INDEL 0002.scaffold00003 1064240 7 ....... CCCCCCC scaffold4320 ScafM SNP 0002.scaffold00003 1064256 1 T G scaffold4320 ScafM INDEL 0002.scaffold00003 1066473 1 . T scaffold4320 ScafM SNP 0002.scaffold00003 1111355 1 A C scaffold20213 ScafM SNP 0002.scaffold00003 1165381 1 T C scaffold40992 ScafM SNP 0002.scaffold00003 1171740 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1171749 1 A G scaffold3830 ScafM SNP 0002.scaffold00003 1171758 1 G C scaffold3830 ScafM INDEL 0002.scaffold00003 1171826 2 .. TT scaffold3830 ScafM SNP 0002.scaffold00003 1171876 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1171945 1 A G scaffold3830 ScafM SNP 0002.scaffold00003 1172013 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1172024 1 G C scaffold3830 ScafM SNP 0002.scaffold00003 1172076 1 A G scaffold3830 ScafM INDEL 0002.scaffold00003 1172304 1 . G scaffold3830 ScafM INDEL 0002.scaffold00003 1172330 1 A . scaffold3830 ScafM SNP 0002.scaffold00003 1172366 1 G A scaffold3830 ScafM SNP 0002.scaffold00003 1172372 1 A G scaffold3830 ScafM SNP 0002.scaffold00003 1172383 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1172410 1 G T scaffold3830 ScafM SNP 0002.scaffold00003 1172613 1 C T scaffold3830 ScafM SNP 0002.scaffold00003 1172619 1 C A scaffold3830 ScafM SNP 0002.scaffold00003 1172681 1 C T scaffold3830 ScafM SNP 0002.scaffold00003 1172822 1 G A scaffold3830 ScafM SNP 0002.scaffold00003 1172830 1 T G scaffold3830 ScafM SNP 0002.scaffold00003 1172911 1 T G scaffold3830 ScafM SNP 0002.scaffold00003 1172957 1 A G scaffold3830 ScafM SNP 0002.scaffold00003 1173078 1 A G scaffold3830 ScafM SNP 0002.scaffold00003 1173157 1 T G scaffold3830 ScafM SNP 0002.scaffold00003 1173175 1 T G scaffold3830 ScafM SNP 0002.scaffold00003 1173304 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1173361 1 G A scaffold3830 ScafM SNP 0002.scaffold00003 1173370 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1173392 1 T C scaffold3830 ScafM SNP 0002.scaffold00003 1173446 1 A C scaffold3830 ScafM SNP 0002.scaffold00003 1201026 1 G A scaffold2212 ScafM SNP 0002.scaffold00003 1209785 1 C A scaffold2212 ScafM SNP 0002.scaffold00003 1210066 1 T C scaffold2212 ScafM SNP 0002.scaffold00003 1210492 1 T C scaffold2212 ScafM INDEL 0002.scaffold00003 1210519 1 A . scaffold2212 ScafM SNP 0002.scaffold00003 1210545 1 A G scaffold2212 ScafM SNP 0002.scaffold00003 1210556 1 G T scaffold2212 ScafM SNP 0002.scaffold00003 1212530 1 C G scaffold2212 ScafM INDEL 0002.scaffold00003 1220053 1 G . scaffold2212 ScafM SNP 0002.scaffold00003 1241270 1 C A scaffold23594 ScafM SNP 0002.scaffold00003 1241282 1 C T scaffold23594 ScafM SNP 0002.scaffold00003 1241344 1 C T scaffold23594 ScafM SNP 0002.scaffold00003 1241352 1 G A scaffold23594 ScafM SNP 0002.scaffold00003 1241356 1 T C scaffold23594 ScafM SNP 0002.scaffold00003 1241411 2 TG CA scaffold23594 ScafM SNP 0002.scaffold00003 1241419 1 C T scaffold23594 ScafM SNP 0002.scaffold00003 1241430 1 G A scaffold23594 ScafM SNP 0002.scaffold00003 1241432 1 C A scaffold23594 ScafM SNP 0002.scaffold00003 1241490 1 C T scaffold23594 ScafM SNP 0002.scaffold00003 1241495 1 T C scaffold23594 ScafM SNP 0002.scaffold00003 1241537 1 T A scaffold23594 ScafM SNP 0002.scaffold00003 1241555 1 A C scaffold23594 ScafM SNP 0002.scaffold00003 1241570 1 G T scaffold23594 ScafM SNP 0002.scaffold00003 1241584 1 G A scaffold23594 ScafM SNP 0002.scaffold00003 1241589 1 T C scaffold23594 ScafM SNP 0002.scaffold00003 1241617 1 A G scaffold23594 ScafM SNP 0002.scaffold00003 1241620 1 T G scaffold23594 ScafM SNP 0002.scaffold00003 1241644 1 A T scaffold23594 ScafM SNP 0002.scaffold00003 1241664 1 G T scaffold23594 ScafM SNP 0002.scaffold00003 1241684 1 C A scaffold23594 ScafM INDEL 0002.scaffold00003 1241709 2 GA .. scaffold23594 ScafM INDEL 0002.scaffold00003 1241712 4 CGCT .... scaffold23594 ScafM SNP 0002.scaffold00003 1241725 1 A G scaffold23594 ScafM SNP 0002.scaffold00003 1241733 1 T A scaffold23594 ScafM SNP 0002.scaffold00003 1241788 1 C T scaffold23594 ScafM SNP 0002.scaffold00003 1241794 1 G A scaffold23594 ScafM SNP 0002.scaffold00003 1241811 1 A G scaffold23594 ScafM SNP 0002.scaffold00003 1241908 1 G A scaffold23594 ScafM SNP 0002.scaffold00003 1253558 1 T C scaffold1474 ScafM SNP 0002.scaffold00003 1253735 1 T C scaffold1474 ReadM SNP 0002.scaffold00003 1258121 1 T C - ScafM INDEL 0002.scaffold00003 1297960 1 . A scaffold5890 ScafM INDEL 0002.scaffold00003 1323403 2 CT .. scaffold5890 ScafM SNP 0002.scaffold00003 1362977 1 T A scaffold113 ScafM SNP 0002.scaffold00003 1362979 1 G A scaffold113 ScafM SNP 0002.scaffold00003 1400510 1 T C scaffold27756 ScafM SNP 0002.scaffold00003 1400605 1 T A scaffold27756 ScafM SNP 0002.scaffold00003 1400617 1 T C scaffold27756 ScafM SNP 0002.scaffold00003 1400825 1 C T scaffold27756 ScafM SNP 0002.scaffold00003 1400833 1 A T scaffold27756 ReadM SNP 0002.scaffold00003 1438775 1 C T - ScafM INDEL 0002.scaffold00003 1447064 15 ............... GTCACTGTTCTGAAC scaffold3468 ScafM SNP 0002.scaffold00003 1447140 1 C A scaffold3468 ScafM SNP 0002.scaffold00003 1447160 1 T C scaffold3468 ScafM SNP 0002.scaffold00003 1447248 1 T C scaffold3468 ReadM SNP 0003.scaffold00019 592 1 T C - ReadM SNP 0003.scaffold00019 785 1 G A - ReadM INDEL 0003.scaffold00019 1202 1 G . - ReadM SNP 0003.scaffold00019 1738 1 G C - ReadM SNP 0003.scaffold00019 2025 1 T G - ReadM SNP 0003.scaffold00019 2488 1 C T - ReadM SNP 0003.scaffold00019 2527 1 T C - ReadM SNP 0003.scaffold00019 2701 1 A T - ReadM SNP 0003.scaffold00019 2821 1 A G - ReadM SNP 0003.scaffold00019 4236 1 C T - ReadM SNP 0003.scaffold00019 4316 1 A G - ReadM SNP 0003.scaffold00019 4347 1 T A - ReadM SNP 0003.scaffold00019 4792 1 T C - ReadM SNP 0003.scaffold00019 5064 1 G A - ReadM SNP 0003.scaffold00019 5357 1 T C - ReadM SNP 0003.scaffold00019 5482 1 C T - ReadM INDEL 0003.scaffold00019 5494 1 . A - ReadM SNP 0003.scaffold00019 5919 1 T A - ReadM SNP 0003.scaffold00019 6485 1 T A - ReadM SNP 0003.scaffold00019 6533 1 C A - ReadM SNP 0003.scaffold00019 7886 1 A G - ReadM SNP 0003.scaffold00019 8624 1 A G - ReadM SNP 0003.scaffold00019 9579 1 T C - ReadM SNP 0003.scaffold00019 10452 1 G A - ReadM SNP 0003.scaffold00019 11327 1 T C - ReadM SNP 0003.scaffold00019 11409 1 C T - ReadM SNP 0003.scaffold00019 11445 1 T C - ReadM SNP 0003.scaffold00019 11832 1 A G - ReadM SNP 0003.scaffold00019 11949 1 T C - ReadM SNP 0003.scaffold00019 11954 1 A G - ReadM SNP 0003.scaffold00019 11984 1 T C - ReadM SNP 0003.scaffold00019 12079 1 A G - ReadM SNP 0003.scaffold00019 12413 1 A G - ScafM INDEL 0003.scaffold00019 12886 29 ............................. ATTGCTCGTCGTTTTCTTCGATCTACGCA scaffold8986 Both INDEL 0003.scaffold00019 13257 2 .. TC scaffold8986 ReadM SNP 0003.scaffold00019 13800 1 T A - Both SNP 0003.scaffold00019 14815 1 G T scaffold8986 Both SNP 0003.scaffold00019 15149 1 T G scaffold8986 ReadM SNP 0003.scaffold00019 16832 1 T C - ReadM SNP 0003.scaffold00019 16954 1 C G - ReadM SNP 0003.scaffold00019 17790 1 T C - ReadM SNP 0003.scaffold00019 17978 1 T A - ReadM SNP 0003.scaffold00019 18121 1 C T - ReadM SNP 0003.scaffold00019 18194 1 A G - ReadM SNP 0003.scaffold00019 18212 1 C G - ReadM SNP 0003.scaffold00019 19100 1 G T - ReadM SNP 0003.scaffold00019 19118 1 T C - ReadM SNP 0003.scaffold00019 19497 1 T A - ReadM SNP 0003.scaffold00019 20327 1 G C - ReadM SNP 0003.scaffold00019 20458 1 C T - ReadM SNP 0003.scaffold00019 21685 1 G T - ReadM SNP 0003.scaffold00019 21970 1 A G - ReadM SNP 0003.scaffold00019 22231 1 C T - ReadM SNP 0003.scaffold00019 23379 1 C G - ReadM SNP 0003.scaffold00019 23691 1 T C - ReadM SNP 0003.scaffold00019 24110 1 A T - ReadM INDEL 0003.scaffold00019 24891 1 G . - ReadM SNP 0003.scaffold00019 25110 1 T C - ReadM SNP 0003.scaffold00019 25739 1 T C - ReadM SNP 0003.scaffold00019 26217 1 T C - ReadM SNP 0003.scaffold00019 26891 1 A C - Both SNP 0003.scaffold00019 28311 1 G A scaffold8986 ReadM SNP 0003.scaffold00019 28525 1 A G - ReadM SNP 0003.scaffold00019 28761 1 T C - Both SNP 0003.scaffold00019 28978 1 T C scaffold8986 ScafM SNP 0003.scaffold00019 28981 1 G A scaffold8986 ReadM SNP 0003.scaffold00019 30080 1 T C - ReadM SNP 0003.scaffold00019 30142 1 T C - Both SNP 0003.scaffold00019 30455 1 G A scaffold8986 ReadM SNP 0003.scaffold00019 30849 1 G T - Both SNP 0003.scaffold00019 32009 1 T C scaffold8986 Both SNP 0003.scaffold00019 32437 1 A G scaffold8986 Both SNP 0003.scaffold00019 33007 1 G C scaffold8986 Both INDEL 0003.scaffold00019 33191 2 AG .. scaffold8986 ScafM SNP 0003.scaffold00019 33322 1 T A scaffold8986 ScafM SNP 0003.scaffold00019 33626 1 A G scaffold8986 ScafM SNP 0003.scaffold00019 33647 1 T G scaffold8986 ReadM SNP 0003.scaffold00019 37269 1 A G - ReadM SNP 0003.scaffold00019 37416 1 G A - ReadM SNP 0003.scaffold00019 37762 1 C T - Both INDEL 0003.scaffold00019 37978 1 . A scaffold8986 ReadM SNP 0003.scaffold00019 38478 1 C T - Both SNP 0003.scaffold00019 40897 1 A G scaffold8986 Both INDEL 0003.scaffold00019 41346 1 . T scaffold8986 ReadM SNP 0003.scaffold00019 41728 1 T A - ReadM SNP 0003.scaffold00019 41893 1 A C - Both SNP 0003.scaffold00019 42579 1 T A scaffold8986 Both SNP 0003.scaffold00019 42589 1 C A scaffold8986 ReadM SNP 0003.scaffold00019 43586 1 C A - ReadM SNP 0003.scaffold00019 43639 1 A G - ReadM SNP 0003.scaffold00019 44237 1 G T - ReadM INDEL 0003.scaffold00019 44475 1 A . - ReadM SNP 0003.scaffold00019 44999 1 C T - Both SNP 0003.scaffold00019 45139 1 C A scaffold8986 ReadM INDEL 0003.scaffold00019 45710 1 A . - ReadM SNP 0003.scaffold00019 45777 1 A C - ReadM SNP 0003.scaffold00019 45799 1 C A - ReadM SNP 0003.scaffold00019 46493 1 T C - ReadM SNP 0003.scaffold00019 47013 1 T A - Both INDEL 0003.scaffold00019 48798 1 A . scaffold8986 ScafM SNP 0003.scaffold00019 48810 1 A T scaffold8986 ScafM INDEL 0003.scaffold00019 49542 22 ...................... TACTTAGCTCCCGAGTTGGTCC scaffold8986 Both SNP 0003.scaffold00019 49944 1 G A scaffold8986 Both SNP 0003.scaffold00019 50050 1 C G scaffold8986 Both SNP 0003.scaffold00019 50175 1 G A scaffold8986 Both SNP 0003.scaffold00019 50196 1 T C scaffold8986 ReadM SNP 0003.scaffold00019 50391 1 A G - ReadM SNP 0003.scaffold00019 50434 1 A C - ReadM SNP 0003.scaffold00019 50655 1 C T - Both INDEL 0003.scaffold00019 50718 1 . A scaffold8986 ReadM SNP 0003.scaffold00019 51381 1 G T - ReadM SNP 0003.scaffold00019 51831 1 T A - ReadM SNP 0003.scaffold00019 51957 1 G A - ReadM SNP 0003.scaffold00019 52379 1 A G - ReadM SNP 0003.scaffold00019 52750 1 G A - ReadM INDEL 0003.scaffold00019 52761 1 G . - Both SNP 0003.scaffold00019 52793 1 T C scaffold8986 Both SNP 0003.scaffold00019 52890 1 A G scaffold8986 Both SNP 0003.scaffold00019 53104 1 T G scaffold8986 ReadM SNP 0003.scaffold00019 53276 1 T C - ReadM SNP 0003.scaffold00019 53298 1 A T - ReadM SNP 0003.scaffold00019 54316 1 C T - ReadM SNP 0003.scaffold00019 54471 1 T C - Both SNP 0003.scaffold00019 54840 1 T G scaffold8986 ReadM SNP 0003.scaffold00019 55452 1 G T - ScafM SNP 0003.scaffold00019 56388 1 G A scaffold8986 ReadM SNP 0003.scaffold00019 57184 1 T A - ScafM SNP 0003.scaffold00019 59776 1 C A scaffold8986 Both SNP 0003.scaffold00019 61031 1 C T scaffold8986 Both SNP 0003.scaffold00019 61077 1 G A scaffold8986 ScafM INDEL 0003.scaffold00019 61447 1 . T scaffold8986 Both SNP 0003.scaffold00019 61460 1 T A scaffold8986 ReadM SNP 0003.scaffold00019 61767 1 C G - ScafM SNP 0003.scaffold00019 64030 1 T C scaffold8986 ReadM SNP 0003.scaffold00019 64823 1 G A - ReadM SNP 0003.scaffold00019 66187 1 T C - ReadM INDEL 0003.scaffold00019 66316 1 T . - ReadM SNP 0003.scaffold00019 66341 1 G A - ReadM SNP 0003.scaffold00019 66382 1 A T - ReadM SNP 0003.scaffold00019 66419 1 A G - ReadM SNP 0003.scaffold00019 66743 1 T A - ReadM SNP 0003.scaffold00019 66860 1 G A - ReadM SNP 0003.scaffold00019 67421 1 T C - ReadM SNP 0003.scaffold00019 67679 1 A G - Both SNP 0003.scaffold00019 68462 1 A G scaffold8986 Both INDEL 0003.scaffold00019 68576 1 . C scaffold8986 ScafM SNP 0003.scaffold00019 68579 1 T C scaffold8986 Both SNP 0003.scaffold00019 68938 1 C A scaffold8986 ReadM SNP 0003.scaffold00019 69209 1 T A - ReadM INDEL 0003.scaffold00019 71086 1 . A - ReadM SNP 0003.scaffold00019 71522 1 G T - ReadM INDEL 0003.scaffold00019 71841 1 . A - ReadM SNP 0003.scaffold00019 72086 1 C T - ReadM SNP 0003.scaffold00019 72231 1 A G - ReadM SNP 0003.scaffold00019 72450 1 A C - ReadM SNP 0003.scaffold00019 72579 1 A C - ReadM SNP 0003.scaffold00019 72939 1 A T - ReadM SNP 0003.scaffold00019 73000 1 T C - ReadM SNP 0003.scaffold00019 73233 1 C T - ReadM SNP 0003.scaffold00019 73514 1 C A - ReadM SNP 0003.scaffold00019 73704 1 T C - ReadM SNP 0003.scaffold00019 73862 1 C T - ReadM SNP 0003.scaffold00019 74042 1 A G - ReadM SNP 0003.scaffold00019 74048 1 G A - ReadM SNP 0003.scaffold00019 74070 1 A G - ReadM SNP 0003.scaffold00019 74640 1 G T - ReadM SNP 0003.scaffold00019 75345 1 A G - ReadM SNP 0003.scaffold00019 76129 1 G A - ReadM SNP 0003.scaffold00019 77919 1 T G - ReadM SNP 0003.scaffold00019 78153 1 G A - ReadM SNP 0003.scaffold00019 78339 1 T C - ReadM SNP 0003.scaffold00019 78536 1 G T - ReadM SNP 0003.scaffold00019 78737 1 C T - ReadM SNP 0003.scaffold00019 79285 1 T A - ReadM SNP 0003.scaffold00019 80067 1 C A - ReadM SNP 0003.scaffold00019 80231 1 A G - ReadM SNP 0003.scaffold00019 80471 1 G A - ReadM SNP 0003.scaffold00019 80486 1 G A - ReadM SNP 0003.scaffold00019 80849 1 T C - ReadM SNP 0003.scaffold00019 81960 1 T A - ReadM SNP 0003.scaffold00019 82044 1 C A - ReadM SNP 0003.scaffold00019 82238 1 C G - ScafM SNP 0003.scaffold00019 82376 2 AT TA scaffold8986 Both INDEL 0003.scaffold00019 82631 1 T . scaffold8986 ReadM SNP 0003.scaffold00019 83250 1 C A - ReadM SNP 0003.scaffold00019 84194 1 A G - ReadM SNP 0003.scaffold00019 84304 1 C T - ReadM SNP 0003.scaffold00019 84366 1 A G - ReadM SNP 0003.scaffold00019 84923 1 C T - ReadM SNP 0003.scaffold00019 84975 1 A C - ReadM SNP 0003.scaffold00019 85063 1 C T - ReadM SNP 0003.scaffold00019 87155 1 C T - ReadM SNP 0003.scaffold00019 87200 2 TT AA - ReadM SNP 0003.scaffold00019 87907 1 C T - ReadM SNP 0003.scaffold00019 89603 1 A T - ReadM SNP 0003.scaffold00019 89897 1 A C - ReadM SNP 0003.scaffold00019 90146 1 T C - ReadM SNP 0003.scaffold00019 90752 1 C A - ReadM INDEL 0003.scaffold00019 90788 1 . T - ReadM SNP 0003.scaffold00019 90968 1 A G - ReadM SNP 0003.scaffold00019 91104 1 T A - ReadM SNP 0003.scaffold00019 91133 1 C T - ReadM SNP 0003.scaffold00019 93075 1 C A - ReadM SNP 0003.scaffold00019 93258 1 T G - ReadM INDEL 0003.scaffold00019 93299 1 T . - ReadM SNP 0003.scaffold00019 94138 1 C T - ReadM SNP 0003.scaffold00019 94719 1 T C - Both SNP 0003.scaffold00019 96896 1 T C scaffold146 Both SNP 0003.scaffold00019 97760 1 C G scaffold146 Both SNP 0003.scaffold00019 98121 1 T A scaffold146 Both SNP 0003.scaffold00019 99157 1 T G scaffold146 ReadM SNP 0003.scaffold00019 100287 1 T C - ScafM SNP 0003.scaffold00019 100996 1 C T scaffold146 ScafM SNP 0003.scaffold00019 101674 1 T A scaffold146 Both SNP 0003.scaffold00019 102170 1 A G scaffold146 Both SNP 0003.scaffold00019 102388 1 G A scaffold146 ReadM SNP 0003.scaffold00019 105094 1 A C - ReadM SNP 0003.scaffold00019 105856 1 G A - ReadM SNP 0003.scaffold00019 106300 1 A T - ReadM SNP 0003.scaffold00019 106560 1 C G - ReadM SNP 0003.scaffold00019 106704 1 A T - ReadM SNP 0003.scaffold00019 107182 1 A G - ReadM SNP 0003.scaffold00019 107563 1 T A - ReadM INDEL 0003.scaffold00019 107796 3 ACT ... - Both SNP 0003.scaffold00019 108217 1 T G scaffold146 ReadM SNP 0003.scaffold00019 108560 1 A G - ReadM SNP 0003.scaffold00019 108783 1 G A - ReadM SNP 0003.scaffold00019 108921 1 A G - ReadM INDEL 0003.scaffold00019 109157 2 AA .. - ReadM SNP 0003.scaffold00019 109282 1 C T - ReadM SNP 0003.scaffold00019 109417 1 T A - Both SNP 0003.scaffold00019 110019 1 C G scaffold146 Both SNP 0003.scaffold00019 113729 1 G A scaffold146 ReadM SNP 0003.scaffold00019 114037 1 T A - Both SNP 0003.scaffold00019 114612 1 A T scaffold146 ReadM SNP 0003.scaffold00019 115183 1 C T - ReadM SNP 0003.scaffold00019 115402 1 G A - ReadM SNP 0003.scaffold00019 115835 1 G A - ReadM SNP 0003.scaffold00019 115867 1 T C - ReadM SNP 0003.scaffold00019 115883 1 C G - ReadM SNP 0003.scaffold00019 117263 1 A C - ReadM SNP 0003.scaffold00019 117299 1 T C - ReadM INDEL 0003.scaffold00019 117367 1 . A - ReadM SNP 0003.scaffold00019 117523 1 C T - ReadM SNP 0003.scaffold00019 117531 1 C T - ReadM SNP 0003.scaffold00019 120025 1 A C - ReadM INDEL 0003.scaffold00019 120111 1 . T - ReadM SNP 0003.scaffold00019 120248 1 T C - Both SNP 0003.scaffold00019 123777 1 A T scaffold146 ReadM SNP 0003.scaffold00019 124120 1 C G - Both SNP 0003.scaffold00019 124392 1 A G scaffold146 ReadM SNP 0003.scaffold00019 124609 1 T A - ScafM INDEL 0003.scaffold00019 124986 6 TATTTT ...... scaffold146 ReadM INDEL 0003.scaffold00019 126353 2 .. TC - ReadM SNP 0003.scaffold00019 127392 1 G C - ReadM SNP 0003.scaffold00019 127674 1 G C - ReadM SNP 0003.scaffold00019 127796 1 G A - ReadM SNP 0003.scaffold00019 127958 1 T C - ReadM SNP 0003.scaffold00019 128352 1 T C - ReadM SNP 0003.scaffold00019 129005 1 C T - ReadM SNP 0003.scaffold00019 129143 1 G T - ReadM SNP 0003.scaffold00019 129894 1 T A - ReadM SNP 0003.scaffold00019 131684 1 G A - ReadM SNP 0003.scaffold00019 132467 1 C T - ReadM SNP 0003.scaffold00019 133161 1 C T - ScafM SNP 0003.scaffold00019 133454 1 A C scaffold146 ScafM SNP 0003.scaffold00019 133474 1 A C scaffold146 ReadM SNP 0003.scaffold00019 136409 1 G T - ReadM SNP 0003.scaffold00019 136748 1 A T - ReadM SNP 0003.scaffold00019 137260 1 C T - ReadM INDEL 0003.scaffold00019 137951 1 . A - ReadM SNP 0003.scaffold00019 138206 1 T C - ReadM SNP 0003.scaffold00019 138499 1 G A - ReadM SNP 0003.scaffold00019 139017 1 T C - ReadM SNP 0003.scaffold00019 139260 1 A C - ReadM SNP 0003.scaffold00019 140080 1 G A - ReadM SNP 0003.scaffold00019 140219 1 C T - ReadM SNP 0003.scaffold00019 140411 1 A C - ReadM SNP 0003.scaffold00019 140446 1 A T - ReadM SNP 0003.scaffold00019 144281 1 A T - ReadM INDEL 0003.scaffold00019 146836 1 . G - Both SNP 0003.scaffold00019 148327 1 T A scaffold146 ReadM INDEL 0003.scaffold00019 148760 3 ... CAA - ReadM SNP 0003.scaffold00019 150374 1 C T - ReadM SNP 0003.scaffold00019 150549 1 A T - ReadM SNP 0003.scaffold00019 151189 1 T C - Both SNP 0003.scaffold00019 151492 1 T C scaffold146 ReadM SNP 0003.scaffold00019 151758 1 A G - ReadM SNP 0003.scaffold00019 151998 1 C G - ReadM SNP 0003.scaffold00019 152949 1 T C - Both SNP 0003.scaffold00019 153036 1 C T scaffold146 ScafM INDEL 0003.scaffold00019 153089 5 CCTGA ..... scaffold146 Both SNP 0003.scaffold00019 153551 1 G A scaffold146 ReadM SNP 0003.scaffold00019 154889 1 C T - Both SNP 0003.scaffold00019 154964 1 A C scaffold146 Both SNP 0003.scaffold00019 154982 1 A G scaffold146 Both SNP 0003.scaffold00019 155013 1 C A scaffold146 Both SNP 0003.scaffold00019 155298 1 G A scaffold146 Both SNP 0003.scaffold00019 155368 1 G A scaffold146 Both SNP 0003.scaffold00019 155425 1 C T scaffold146 Both SNP 0003.scaffold00019 155588 1 G A scaffold146 ScafM SNP 0003.scaffold00019 155647 1 G A scaffold146 Both SNP 0003.scaffold00019 155818 1 T A scaffold146 Both SNP 0003.scaffold00019 156184 1 G A scaffold146 Both SNP 0003.scaffold00019 156188 1 C T scaffold146 Both SNP 0003.scaffold00019 156217 1 C T scaffold146 ScafM INDEL 0003.scaffold00019 156409 2 CA .. scaffold146 Both SNP 0003.scaffold00019 156450 1 T G scaffold146 Both SNP 0003.scaffold00019 156545 1 C T scaffold146 Both SNP 0003.scaffold00019 156878 1 G A scaffold146 Both SNP 0003.scaffold00019 157006 1 T C scaffold146 Both SNP 0003.scaffold00019 157254 1 G A scaffold146 Both SNP 0003.scaffold00019 157579 1 A G scaffold146 ScafM INDEL 0003.scaffold00019 158038 2 .. AA scaffold146 Both SNP 0003.scaffold00019 158284 1 T A scaffold146 Both SNP 0003.scaffold00019 158927 1 T C scaffold146 Both SNP 0003.scaffold00019 159010 1 A C scaffold146 ScafM SNP 0003.scaffold00019 159157 1 C T scaffold146 Both SNP 0003.scaffold00019 159235 1 A G scaffold146 ReadM SNP 0003.scaffold00019 159464 1 G A - ReadM SNP 0003.scaffold00019 159791 1 T C - ReadM SNP 0003.scaffold00019 161143 1 T A - ScafM SNP 0003.scaffold00019 161329 1 G A scaffold146 ScafM SNP 0003.scaffold00019 161331 1 C G scaffold146 ScafM INDEL 0003.scaffold00019 161449 1 . T scaffold146 ScafM INDEL 0003.scaffold00019 161460 1 A . scaffold146 ScafM SNP 0003.scaffold00019 161588 1 T A scaffold146 ReadM SNP 0003.scaffold00019 162960 1 C A - ReadM SNP 0003.scaffold00019 164429 1 A G - ScafM INDEL 0003.scaffold00019 164663 3 TTA ... scaffold146 ScafM SNP 0003.scaffold00019 165296 1 A G scaffold146 ScafM SNP 0003.scaffold00019 165539 1 C T scaffold146 ScafM SNP 0003.scaffold00019 165709 1 T A scaffold146 ReadM SNP 0003.scaffold00019 165951 1 G C - ScafM SNP 0003.scaffold00019 166074 1 C A scaffold146 ScafM SNP 0003.scaffold00019 166138 1 G C scaffold146 ReadM SNP 0003.scaffold00019 166348 1 G T - ScafM SNP 0003.scaffold00019 182026 1 C T scaffold17274 ScafM SNP 0003.scaffold00019 182032 1 A C scaffold17274 ScafM SNP 0003.scaffold00019 182112 1 C A scaffold17274 ScafM SNP 0003.scaffold00019 182239 1 G A scaffold17274 ScafM SNP 0003.scaffold00019 182473 1 T C scaffold9176 ScafM SNP 0003.scaffold00019 182511 1 G A scaffold9176 ScafM SNP 0003.scaffold00019 182643 1 A G scaffold9176 ScafM SNP 0003.scaffold00019 182665 1 C T scaffold9176 ScafM SNP 0003.scaffold00019 182720 1 C A scaffold9176 ScafM SNP 0003.scaffold00019 182722 1 A C scaffold9176 ScafM SNP 0003.scaffold00019 182753 2 GC TT scaffold9176 ScafM SNP 0003.scaffold00019 182868 1 G T scaffold9176 ScafM SNP 0003.scaffold00019 182872 1 G A scaffold9176 Both SNP 0003.scaffold00019 182890 1 A G scaffold9176 ScafM INDEL 0003.scaffold00019 182923 1 . G scaffold9176 ReadM SNP 0003.scaffold00019 182930 1 T G - ScafM SNP 0003.scaffold00019 182933 1 C A scaffold9176 ScafM SNP 0003.scaffold00019 182948 1 A G scaffold9176 ScafM SNP 0003.scaffold00019 182999 1 A T scaffold9176 Both SNP 0003.scaffold00019 183011 1 G C scaffold9176 ScafM SNP 0003.scaffold00019 183027 1 T C scaffold9176 ScafM SNP 0003.scaffold00019 183038 1 G C scaffold9176 ScafM SNP 0003.scaffold00019 183041 1 T G scaffold9176 ScafM SNP 0003.scaffold00019 183126 1 C T scaffold9176 ScafM SNP 0003.scaffold00019 183134 1 T G scaffold9176 ScafM SNP 0003.scaffold00019 183142 1 C T scaffold9176 ScafM SNP 0003.scaffold00019 183156 1 G T scaffold9176 Both SNP 0003.scaffold00019 187455 1 G C scaffold10826 Both SNP 0003.scaffold00019 187543 1 A G scaffold10826 ScafM SNP 0003.scaffold00019 187671 1 T C scaffold10826 ReadM SNP 0003.scaffold00019 188785 1 A G - ReadM SNP 0003.scaffold00019 189137 1 T C - ReadM SNP 0003.scaffold00019 189167 1 T C - ReadM SNP 0003.scaffold00019 190042 1 C T - ReadM SNP 0003.scaffold00019 190489 1 C T - ReadM SNP 0003.scaffold00019 190521 1 T C - ReadM SNP 0003.scaffold00019 190539 1 G T - ReadM SNP 0003.scaffold00019 190619 1 A C - Both SNP 0003.scaffold00019 190939 1 G A scaffold10826 Both SNP 0003.scaffold00019 191170 1 G A scaffold10826 Both SNP 0003.scaffold00019 191511 1 T A scaffold10826 ReadM SNP 0003.scaffold00019 193017 1 C T - ReadM SNP 0003.scaffold00019 193247 1 G T - ReadM SNP 0003.scaffold00019 193579 1 A G - ReadM SNP 0003.scaffold00019 193747 1 G A - ReadM SNP 0003.scaffold00019 194159 1 C G - ReadM SNP 0003.scaffold00019 194685 1 T C - ReadM SNP 0003.scaffold00019 194694 1 T A - ReadM SNP 0003.scaffold00019 194711 1 A C - ReadM SNP 0003.scaffold00019 195953 1 C T - ReadM SNP 0003.scaffold00019 196121 1 T G - ReadM SNP 0003.scaffold00019 196531 1 T C - ReadM SNP 0003.scaffold00019 196565 1 C T - ReadM SNP 0003.scaffold00019 197534 1 C G - ReadM SNP 0003.scaffold00019 198376 1 C G - Both SNP 0003.scaffold00019 198716 1 A G scaffold10826 ReadM SNP 0003.scaffold00019 199000 1 C T - ReadM SNP 0003.scaffold00019 199194 1 A T - ReadM SNP 0003.scaffold00019 199723 2 GG AC - ReadM SNP 0003.scaffold00019 199778 1 T G - ReadM SNP 0003.scaffold00019 199935 1 C T - ReadM SNP 0003.scaffold00019 200839 1 T A - ReadM INDEL 0003.scaffold00019 200862 1 C . - ReadM INDEL 0003.scaffold00019 205070 1 A . - ReadM SNP 0003.scaffold00019 205184 1 T A - ReadM SNP 0003.scaffold00019 205223 1 A T - ReadM SNP 0003.scaffold00019 205397 1 C T - ReadM SNP 0003.scaffold00019 205742 1 C T - ReadM SNP 0003.scaffold00019 206874 1 A C - ReadM SNP 0003.scaffold00019 208379 1 A G - ReadM SNP 0003.scaffold00019 208923 1 C T - ReadM SNP 0003.scaffold00019 208978 1 C A - ReadM SNP 0003.scaffold00019 209094 1 A G - ReadM SNP 0003.scaffold00019 209704 1 T C - ReadM SNP 0003.scaffold00019 210524 1 T A - ReadM SNP 0003.scaffold00019 210613 1 G T - ReadM SNP 0003.scaffold00019 211368 1 A G - ReadM SNP 0003.scaffold00019 211477 1 C A - ReadM SNP 0003.scaffold00019 211944 1 A G - ReadM SNP 0003.scaffold00019 212439 1 T C - ReadM SNP 0003.scaffold00019 212582 1 G C - ReadM SNP 0003.scaffold00019 212679 1 T A - ReadM SNP 0003.scaffold00019 213153 1 G A - ReadM SNP 0003.scaffold00019 213305 1 T A - ReadM SNP 0003.scaffold00019 213457 1 T A - Both SNP 0003.scaffold00019 216109 1 T C scaffold10826 Both SNP 0003.scaffold00019 216193 1 G T scaffold10826 ReadM SNP 0003.scaffold00019 216239 1 A G - ReadM SNP 0003.scaffold00019 216744 1 C T - ReadM SNP 0003.scaffold00019 217299 1 T G - ReadM SNP 0003.scaffold00019 217879 1 A G - Both SNP 0003.scaffold00019 218061 1 G A scaffold10826 Both SNP 0003.scaffold00019 218790 1 T A scaffold10826 ReadM INDEL 0003.scaffold00019 218915 1 T . - ScafM INDEL 0003.scaffold00019 219449 1 A . scaffold10826 ReadM SNP 0003.scaffold00019 221429 1 A G - Both SNP 0003.scaffold00019 222392 1 A T scaffold10826 ReadM SNP 0003.scaffold00019 222919 1 A G - ReadM SNP 0003.scaffold00019 223220 1 T C - ReadM SNP 0003.scaffold00019 223704 1 G T - ReadM INDEL 0003.scaffold00019 224181 1 T . - ReadM SNP 0003.scaffold00019 224601 1 G A - ReadM SNP 0003.scaffold00019 224872 1 G A - ReadM SNP 0003.scaffold00019 225425 1 T C - ReadM SNP 0003.scaffold00019 225453 1 A T - ReadM SNP 0003.scaffold00019 225670 1 A T - ReadM SNP 0003.scaffold00019 225750 1 T A - ReadM SNP 0003.scaffold00019 226022 1 T C - ScafM INDEL 0003.scaffold00019 226215 10 TCCATATTTA .......... scaffold10826 ScafM SNP 0003.scaffold00019 226229 1 A G scaffold10826 ScafM SNP 0003.scaffold00019 226231 1 T G scaffold10826 ScafM INDEL 0003.scaffold00019 226378 1 . G scaffold10826 ScafM SNP 0003.scaffold00019 226380 1 T G scaffold10826 ScafM INDEL 0003.scaffold00019 227195 1 G . scaffold10826 Both SNP 0003.scaffold00019 227264 1 T C scaffold10826 ScafM INDEL 0003.scaffold00019 229610 2 .C TT scaffold10826 ScafM SNP 0003.scaffold00019 229847 1 T C scaffold10826 ScafM SNP 0003.scaffold00019 229849 1 G T scaffold10826 Both SNP 0003.scaffold00019 231272 1 G A scaffold10826 ScafM SNP 0003.scaffold00019 231491 1 C T scaffold10826 ScafM SNP 0003.scaffold00019 231694 1 G C scaffold10826 ScafM SNP 0003.scaffold00019 232388 2 AA GG scaffold10826 ReadM SNP 0003.scaffold00019 233130 1 G C - ReadM SNP 0003.scaffold00019 233245 1 T G - ReadM SNP 0003.scaffold00019 233572 1 G A - Both SNP 0003.scaffold00019 233909 1 G A scaffold10826 Both SNP 0003.scaffold00019 233916 1 C T scaffold10826 ReadM SNP 0003.scaffold00019 234395 1 T A - ReadM SNP 0003.scaffold00019 234829 1 C T - ReadM SNP 0003.scaffold00019 235184 1 T C - ReadM SNP 0003.scaffold00019 235208 1 A G - ReadM SNP 0003.scaffold00019 235328 1 C A - ReadM SNP 0003.scaffold00019 236058 1 G A - ReadM SNP 0003.scaffold00019 236181 1 C T - ReadM SNP 0003.scaffold00019 236381 1 G A - ReadM INDEL 0003.scaffold00019 236643 1 G . - ReadM SNP 0003.scaffold00019 236863 1 A C - ReadM SNP 0003.scaffold00019 236979 1 A G - ReadM SNP 0003.scaffold00019 237731 1 T G - Both SNP 0003.scaffold00019 238475 1 T C scaffold10826 Both SNP 0003.scaffold00019 238973 1 G T scaffold10826 Both SNP 0003.scaffold00019 239780 1 T A scaffold2120 Both SNP 0003.scaffold00019 240271 1 G A scaffold2120 Both SNP 0003.scaffold00019 240414 1 G A scaffold2120 ReadM SNP 0003.scaffold00019 241012 1 C A - ReadM SNP 0003.scaffold00019 241699 1 C A - ReadM SNP 0003.scaffold00019 242265 1 A C - ReadM SNP 0003.scaffold00019 243368 1 G T - ReadM SNP 0003.scaffold00019 243578 1 A G - ReadM SNP 0003.scaffold00019 244094 1 A G - ReadM SNP 0003.scaffold00019 244136 1 G A - ReadM SNP 0003.scaffold00019 244460 1 G A - ReadM SNP 0003.scaffold00019 245923 1 A C - ScafM SNP 0003.scaffold00019 248591 1 C T scaffold2120 ScafM INDEL 0003.scaffold00019 248990 1 G . scaffold2120 Both SNP 0003.scaffold00019 249225 1 G T scaffold2120 ScafM SNP 0003.scaffold00019 249853 2 GA AG scaffold2120 ScafM INDEL 0003.scaffold00019 249891 49 ATATATATTGCAGGTGAAGAAAGCTAATGAATTCGGGTGGTAAACGGGC ................................................. scaffold2120 Both SNP 0003.scaffold00019 250521 1 T G scaffold2120 Both INDEL 0003.scaffold00019 251147 1 . A scaffold2120 ScafM SNP 0003.scaffold00019 251164 1 G T scaffold2120 ScafM INDEL 0003.scaffold00019 251175 36 GGGCAGGGACGGGGATTGAGCAAGGACAGACGAGTA .................................... scaffold2120 ScafM SNP 0003.scaffold00019 251524 1 T C scaffold2120 ReadM SNP 0003.scaffold00019 252629 1 C T - Both SNP 0003.scaffold00019 252985 1 A G scaffold2120 ReadM SNP 0003.scaffold00019 253201 1 G A - Both INDEL 0003.scaffold00019 253372 1 A . scaffold2120 Both SNP 0003.scaffold00019 253659 1 G C scaffold2120 ReadM SNP 0003.scaffold00019 254329 1 T A - ReadM SNP 0003.scaffold00019 254928 1 A G - ScafM SNP 0003.scaffold00019 255391 1 T G scaffold2120 ScafM SNP 0003.scaffold00019 255769 1 C T scaffold13395 ReadM INDEL 0003.scaffold00019 258199 1 . T - ScafM SNP 0003.scaffold00019 262308 1 T C scaffold5702 ScafM SNP 0003.scaffold00019 262317 1 G C scaffold5702 ScafM SNP 0003.scaffold00019 262330 1 A G scaffold5702 ScafM SNP 0003.scaffold00019 262340 1 T C scaffold5702 ScafM SNP 0003.scaffold00019 262354 1 T C scaffold5702 Both SNP 0003.scaffold00019 262382 1 C T scaffold5702 ScafM SNP 0003.scaffold00019 262434 1 G A scaffold5702 ScafM SNP 0003.scaffold00019 262457 1 G C scaffold5702 ScafM SNP 0003.scaffold00019 262463 1 A G scaffold5702 ScafM SNP 0003.scaffold00019 262490 2 CC TA scaffold5702 ScafM SNP 0003.scaffold00019 262498 1 C T scaffold5702 ScafM SNP 0003.scaffold00019 262540 2 AG TA scaffold5702 ScafM SNP 0003.scaffold00019 262573 1 G A scaffold5702 ScafM SNP 0003.scaffold00019 262607 1 T C scaffold5702 ScafM SNP 0003.scaffold00019 262620 1 C A scaffold5702 ScafM SNP 0003.scaffold00019 262633 1 A G scaffold5702 ScafM SNP 0003.scaffold00019 262637 1 G A scaffold5702 ScafM SNP 0003.scaffold00019 262648 1 C T scaffold5702 ScafM SNP 0003.scaffold00019 262654 1 A G scaffold5702 ScafM INDEL 0003.scaffold00019 262665 1 G . scaffold5702 ScafM SNP 0003.scaffold00019 262668 1 G A scaffold5702 ScafM SNP 0003.scaffold00019 262708 1 A G scaffold5702 ScafM SNP 0003.scaffold00019 262749 1 G T scaffold5702 ScafM SNP 0003.scaffold00019 262831 1 A G scaffold5702 ScafM SNP 0003.scaffold00019 262883 1 T C scaffold5702 ScafM SNP 0003.scaffold00019 262894 2 CC TA scaffold5702 ReadM SNP 0003.scaffold00019 267729 1 G A - ReadM SNP 0003.scaffold00019 267845 1 C T - ReadM SNP 0003.scaffold00019 268068 1 G C - ReadM SNP 0003.scaffold00019 268626 1 G T - ReadM SNP 0003.scaffold00019 273481 1 T G - ReadM SNP 0003.scaffold00019 274338 1 T C - Both SNP 0003.scaffold00019 279333 1 G C scaffold2120 Both SNP 0003.scaffold00019 280259 1 A C scaffold2120 Both SNP 0003.scaffold00019 282991 1 A G scaffold2120 Both SNP 0003.scaffold00019 283233 1 A G scaffold2120 ReadM SNP 0003.scaffold00019 285065 1 C T - ScafM INDEL 0003.scaffold00019 285889 1 . T scaffold2120 ReadM INDEL 0003.scaffold00019 286606 1 G . - ReadM SNP 0003.scaffold00019 286765 1 A T - ReadM INDEL 0003.scaffold00019 287109 1 . A - ReadM SNP 0003.scaffold00019 287345 1 T G - ReadM INDEL 0003.scaffold00019 291914 1 . C - ReadM SNP 0003.scaffold00019 292332 1 T G - Both SNP 0003.scaffold00019 292525 1 A G scaffold2120 Both SNP 0003.scaffold00019 292531 1 C A scaffold2120 Both SNP 0003.scaffold00019 292896 1 G A scaffold2120 ReadM INDEL 0003.scaffold00019 293347 1 T . - ReadM SNP 0003.scaffold00019 293400 1 T C - ReadM SNP 0003.scaffold00019 293549 1 C T - ReadM SNP 0003.scaffold00019 293577 1 A G - ReadM SNP 0003.scaffold00019 293594 1 C T - ReadM SNP 0003.scaffold00019 293955 1 A T - ReadM SNP 0003.scaffold00019 294432 1 T C - ReadM SNP 0003.scaffold00019 296738 1 G T - ReadM SNP 0003.scaffold00019 296892 1 A G - ReadM SNP 0003.scaffold00019 297114 1 A C - ReadM SNP 0003.scaffold00019 297296 1 T C - ReadM SNP 0003.scaffold00019 297724 1 A T - ReadM INDEL 0003.scaffold00019 297845 1 . A - ReadM SNP 0003.scaffold00019 298017 1 C T - ReadM SNP 0003.scaffold00019 298079 1 G A - ReadM SNP 0003.scaffold00019 298117 1 G A - ReadM SNP 0003.scaffold00019 299113 1 G A - ReadM INDEL 0003.scaffold00019 299372 1 . T - ReadM INDEL 0003.scaffold00019 299690 1 A . - ReadM SNP 0003.scaffold00019 300002 1 T A - ReadM SNP 0003.scaffold00019 300469 1 C T - ReadM SNP 0003.scaffold00019 300744 1 A C - ReadM SNP 0003.scaffold00019 301120 1 T C - ReadM SNP 0003.scaffold00019 301910 1 G T - ReadM SNP 0003.scaffold00019 304111 1 C G - ReadM SNP 0003.scaffold00019 304994 1 C T - ReadM SNP 0003.scaffold00019 305600 1 A G - ReadM SNP 0003.scaffold00019 305800 1 T C - ReadM SNP 0003.scaffold00019 305871 1 C T - ReadM SNP 0003.scaffold00019 305885 1 G C - ReadM INDEL 0003.scaffold00019 307313 1 . T - ReadM SNP 0003.scaffold00019 308017 1 G T - ReadM SNP 0003.scaffold00019 309610 1 G A - ReadM SNP 0003.scaffold00019 310405 1 G A - ReadM INDEL 0003.scaffold00019 311184 1 T . - ReadM SNP 0003.scaffold00019 311572 1 A G - ReadM SNP 0003.scaffold00019 311585 1 A G - ReadM SNP 0003.scaffold00019 311594 1 T C - Both SNP 0003.scaffold00019 312259 1 G T scaffold2120 ReadM SNP 0003.scaffold00019 312309 1 G T - ScafM SNP 0003.scaffold00019 313099 1 A G scaffold2120 Both SNP 0003.scaffold00019 313303 1 C A scaffold2120 Both SNP 0003.scaffold00019 313992 1 A G scaffold2120 Both SNP 0003.scaffold00019 314027 1 G A scaffold2120 ReadM INDEL 0003.scaffold00019 314870 1 . T - ReadM SNP 0003.scaffold00019 315081 1 T G - ReadM INDEL 0003.scaffold00019 316676 1 G . - ReadM INDEL 0003.scaffold00019 316923 1 G . - ReadM SNP 0003.scaffold00019 319953 1 G C - ReadM SNP 0003.scaffold00019 333588 1 T C - ReadM SNP 0003.scaffold00019 337502 1 G A - ReadM SNP 0004.scaffold00019 627 1 C T - ReadM SNP 0004.scaffold00019 749 1 T A - ReadM SNP 0004.scaffold00019 754 1 A G - ReadM SNP 0004.scaffold00019 824 1 G A - ScafM SNP 0004.scaffold00019 1067 2 GA AG scaffold3222 ScafM SNP 0004.scaffold00019 1129 1 G A scaffold3222 Both SNP 0004.scaffold00019 1334 1 A G scaffold3222 ReadM SNP 0004.scaffold00019 1875 1 A C - ScafM SNP 0004.scaffold00019 2158 1 A T scaffold3222 ScafM SNP 0004.scaffold00019 2213 1 A G scaffold3222 ScafM SNP 0004.scaffold00019 2242 1 G A scaffold3222 ScafM SNP 0004.scaffold00019 2475 1 A G scaffold3222 ScafM SNP 0004.scaffold00019 4288 1 G A scaffold3222 ScafM INDEL 0004.scaffold00019 4606 1 A . scaffold3222 ScafM SNP 0004.scaffold00019 4712 1 A G scaffold3222 ReadM SNP 0004.scaffold00019 4815 1 A G - ScafM SNP 0004.scaffold00019 5104 1 A C scaffold3222 Both SNP 0004.scaffold00019 5439 1 T A scaffold3222 ScafM SNP 0004.scaffold00019 5539 1 C T scaffold3222 ScafM SNP 0004.scaffold00019 5602 1 A G scaffold3222 ScafM SNP 0004.scaffold00019 5613 1 G A scaffold3222 Both SNP 0004.scaffold00019 5639 1 A T scaffold3222 Both SNP 0004.scaffold00019 5875 1 G A scaffold3222 Both SNP 0004.scaffold00019 6100 1 G C scaffold3222 Both SNP 0004.scaffold00019 6143 1 A G scaffold3222 ScafM SNP 0004.scaffold00019 6233 1 C G scaffold3222 ScafM INDEL 0004.scaffold00019 6294 4 .... TTTC scaffold3222 Both SNP 0004.scaffold00019 6354 1 C T scaffold3222 Both INDEL 0004.scaffold00019 6447 1 T . scaffold3222 Both SNP 0004.scaffold00019 6543 1 A G scaffold3222 ReadM SNP 0004.scaffold00019 6728 2 CG TA - Both SNP 0004.scaffold00019 6792 1 G A scaffold3222 Both SNP 0004.scaffold00019 6903 1 C G scaffold3222 Both SNP 0004.scaffold00019 7039 1 G A scaffold3222 Both SNP 0004.scaffold00019 7125 1 A T scaffold3222 ReadM SNP 0004.scaffold00019 8153 1 A C - ReadM SNP 0004.scaffold00019 9490 1 G A - ReadM SNP 0004.scaffold00019 9687 1 G A - ReadM SNP 0004.scaffold00019 9920 1 T C - ReadM SNP 0004.scaffold00019 10010 1 G A - ReadM SNP 0004.scaffold00019 10017 1 A T - ReadM SNP 0004.scaffold00019 10330 1 G A - ReadM SNP 0004.scaffold00019 10421 1 C A - Both SNP 0004.scaffold00019 10561 1 T C scaffold3222 ScafM SNP 0004.scaffold00019 10866 1 T C scaffold3222 ReadM INDEL 0004.scaffold00019 11082 1 G . - ReadM SNP 0004.scaffold00019 11109 1 T G - ReadM SNP 0004.scaffold00019 11186 1 C T - ReadM SNP 0004.scaffold00019 11301 1 C T - ReadM SNP 0004.scaffold00019 11447 1 G A - ReadM SNP 0004.scaffold00019 11700 1 G A - ReadM SNP 0004.scaffold00019 11718 1 G A - ReadM SNP 0004.scaffold00019 11800 1 C T - ReadM SNP 0004.scaffold00019 11828 1 C T - ReadM SNP 0004.scaffold00019 12359 1 A T - ReadM SNP 0004.scaffold00019 13204 1 C T - ReadM SNP 0004.scaffold00019 13296 1 T C - ReadM SNP 0004.scaffold00019 14320 1 T C - ReadM SNP 0004.scaffold00019 14648 1 A C - ReadM SNP 0004.scaffold00019 14717 1 G T - ReadM SNP 0004.scaffold00019 14736 1 G T - ReadM SNP 0004.scaffold00019 14786 1 C T - ReadM SNP 0004.scaffold00019 14839 1 C G - ReadM SNP 0004.scaffold00019 14851 1 C A - ReadM SNP 0004.scaffold00019 15064 1 T C - ReadM SNP 0004.scaffold00019 15158 1 G T - ReadM SNP 0004.scaffold00019 15202 1 G A - Both SNP 0004.scaffold00019 15900 1 A G scaffold3222 ReadM SNP 0004.scaffold00019 16326 1 G A - ReadM SNP 0004.scaffold00019 16413 1 C T - Both SNP 0004.scaffold00019 16834 1 A G scaffold3222 Both INDEL 0004.scaffold00019 16875 1 . T scaffold3222 Both SNP 0004.scaffold00019 17206 1 G C scaffold3222 Both SNP 0004.scaffold00019 17294 1 C A scaffold3222 ReadM SNP 0004.scaffold00019 17417 1 T C - ReadM SNP 0004.scaffold00019 17605 1 T C - ReadM SNP 0004.scaffold00019 17612 1 T A - Both SNP 0004.scaffold00019 17875 1 T C scaffold3222 Both SNP 0004.scaffold00019 17928 1 C G scaffold3222 ReadM INDEL 0004.scaffold00019 18279 1 . C - ReadM SNP 0004.scaffold00019 18314 1 C T - ReadM SNP 0004.scaffold00019 18323 1 G A - ReadM SNP 0004.scaffold00019 19103 1 A C - ReadM SNP 0004.scaffold00019 19442 1 C T - ReadM SNP 0004.scaffold00019 19636 1 T A - ReadM SNP 0004.scaffold00019 19900 1 A C - ReadM SNP 0004.scaffold00019 20193 1 C A - Both SNP 0004.scaffold00019 20737 1 C T scaffold3222 Both SNP 0004.scaffold00019 22037 1 T C scaffold6117 Both INDEL 0004.scaffold00019 22041 1 T . scaffold6117 ReadM INDEL 0004.scaffold00019 22041 1 . A - ScafM SNP 0004.scaffold00019 22381 1 T G scaffold6117 Both SNP 0004.scaffold00019 22859 1 T G scaffold6117 ScafM SNP 0004.scaffold00019 23475 1 T G scaffold6117 ReadM SNP 0004.scaffold00019 23808 1 A G - ReadM SNP 0004.scaffold00019 24183 1 A C - ScafM SNP 0004.scaffold00019 25490 1 A C scaffold361 ScafM SNP 0004.scaffold00019 25536 1 G A scaffold361 ScafM INDEL 0004.scaffold00019 26172 1 . A scaffold9025 ScafM SNP 0004.scaffold00019 26189 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26197 1 G C scaffold9025 ScafM SNP 0004.scaffold00019 26202 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26204 1 G A scaffold9025 ScafM SNP 0004.scaffold00019 26213 1 T C scaffold9025 ScafM SNP 0004.scaffold00019 26259 1 C A scaffold9025 ScafM SNP 0004.scaffold00019 26277 1 C A scaffold9025 ScafM SNP 0004.scaffold00019 26291 1 G C scaffold9025 ScafM SNP 0004.scaffold00019 26352 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26361 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26395 1 G A scaffold9025 ScafM SNP 0004.scaffold00019 26398 2 GA AT scaffold9025 ScafM SNP 0004.scaffold00019 26424 1 T C scaffold9025 ScafM SNP 0004.scaffold00019 26450 1 A T scaffold9025 ScafM SNP 0004.scaffold00019 26499 1 T G scaffold9025 ScafM SNP 0004.scaffold00019 26580 1 G A scaffold9025 ScafM SNP 0004.scaffold00019 26632 1 T A scaffold9025 ScafM SNP 0004.scaffold00019 26636 1 G A scaffold9025 ScafM INDEL 0004.scaffold00019 26643 9 TGTCCTTAG ......... scaffold9025 ScafM SNP 0004.scaffold00019 26775 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26796 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26813 1 T C scaffold9025 ScafM SNP 0004.scaffold00019 26815 1 C T scaffold9025 Both SNP 0004.scaffold00019 26817 1 C G scaffold9025 ScafM SNP 0004.scaffold00019 26822 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26830 1 C A scaffold9025 ScafM SNP 0004.scaffold00019 26844 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 26859 1 A G scaffold9025 ScafM SNP 0004.scaffold00019 26889 1 A G scaffold9025 ScafM INDEL 0004.scaffold00019 26994 3 ATT ... scaffold9025 ScafM SNP 0004.scaffold00019 27007 1 T C scaffold9025 ScafM SNP 0004.scaffold00019 27032 1 G T scaffold9025 ScafM SNP 0004.scaffold00019 27048 1 T G scaffold9025 ScafM SNP 0004.scaffold00019 27056 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 27067 1 G A scaffold9025 ScafM SNP 0004.scaffold00019 27074 1 C T scaffold9025 ScafM SNP 0004.scaffold00019 27134 1 C T scaffold9025 ReadM SNP 0004.scaffold00019 27433 1 T A - ScafM SNP 0004.scaffold00019 30141 1 A G scaffold44392 Both INDEL 0004.scaffold00019 30545 1 A . scaffold44392 ScafM SNP 0004.scaffold00019 30594 1 A G scaffold44392 ScafM SNP 0004.scaffold00019 30777 1 C G scaffold44392 Both SNP 0004.scaffold00019 30831 1 A G scaffold44392 ScafM SNP 0004.scaffold00019 30976 1 G C scaffold44392 ScafM SNP 0004.scaffold00019 31187 1 T A scaffold44392 ScafM SNP 0004.scaffold00019 31394 1 T A scaffold44392 ScafM SNP 0004.scaffold00019 31505 1 A T scaffold44392 Both SNP 0004.scaffold00019 31625 1 A G scaffold44392 ScafM SNP 0004.scaffold00019 31828 1 A T scaffold44392 ScafM INDEL 0004.scaffold00019 31880 1 T . scaffold44392 ScafM INDEL 0004.scaffold00019 31945 1 T . scaffold44392 ScafM SNP 0004.scaffold00019 32034 1 T C scaffold44392 ReadM SNP 0004.scaffold00019 32807 1 T C - ReadM SNP 0004.scaffold00019 33235 1 A G - ReadM SNP 0004.scaffold00019 33264 1 A G - ReadM SNP 0004.scaffold00019 33284 1 A G - ReadM SNP 0004.scaffold00019 33486 1 A T - ScafM SNP 0004.scaffold00019 34006 1 C T scaffold56565 ScafM SNP 0004.scaffold00019 34098 1 A G scaffold56565 ScafM SNP 0004.scaffold00019 36026 1 T A scaffold56565 ReadM SNP 0004.scaffold00019 36460 1 C T - ReadM SNP 0004.scaffold00019 36523 1 A G - Both INDEL 0004.scaffold00019 37104 1 . T scaffold56565 ScafM SNP 0004.scaffold00019 37298 1 T A scaffold56565 ScafM INDEL 0004.scaffold00019 37604 27 ........................... TTTCCATGCCTGCCTTCATCTTACCAG scaffold56565 Both SNP 0004.scaffold00019 38401 1 G C scaffold56565 ScafM SNP 0004.scaffold00019 38644 1 A G scaffold56565 Both SNP 0004.scaffold00019 38662 1 C G scaffold56565 ScafM SNP 0004.scaffold00019 38882 1 A G scaffold56565 Both SNP 0004.scaffold00019 38891 1 G A scaffold56565 Both SNP 0004.scaffold00019 38910 1 A G scaffold56565 ReadM INDEL 0004.scaffold00019 39096 1 T . - Both SNP 0004.scaffold00019 39153 1 C T scaffold56565 Both SNP 0004.scaffold00019 39486 1 T A scaffold56565 Both SNP 0004.scaffold00019 39497 1 T C scaffold56565 Both SNP 0004.scaffold00019 39576 1 A G scaffold56565 Both SNP 0004.scaffold00019 40683 1 T C scaffold56565 ReadM SNP 0004.scaffold00019 42515 1 A T - ReadM SNP 0004.scaffold00019 42565 1 G A - ReadM SNP 0004.scaffold00019 42691 1 C T - ReadM SNP 0004.scaffold00019 42927 1 A G - ReadM SNP 0004.scaffold00019 43367 1 G A - ReadM SNP 0004.scaffold00019 43503 1 C A - ReadM SNP 0004.scaffold00019 43655 1 A C - ReadM SNP 0004.scaffold00019 43927 1 A G - ReadM SNP 0004.scaffold00019 43943 1 T C - ReadM SNP 0004.scaffold00019 44111 1 G T - ReadM SNP 0004.scaffold00019 44175 1 G A - ReadM SNP 0004.scaffold00019 44205 1 T C - ReadM SNP 0004.scaffold00019 45951 1 C T - ReadM SNP 0004.scaffold00019 46027 1 T C - ReadM SNP 0004.scaffold00019 46528 1 A G - ReadM SNP 0004.scaffold00019 46718 1 A T - ReadM SNP 0004.scaffold00019 46768 1 G A - ReadM SNP 0004.scaffold00019 46841 1 A T - ReadM SNP 0004.scaffold00019 47923 1 T A - ReadM SNP 0004.scaffold00019 47982 1 C T - ReadM SNP 0004.scaffold00019 48211 1 A G - ReadM SNP 0004.scaffold00019 48302 1 C T - ReadM INDEL 0004.scaffold00019 49103 1 A . - ReadM SNP 0004.scaffold00019 50913 1 A G - ReadM SNP 0004.scaffold00019 51508 1 G A - ReadM SNP 0004.scaffold00019 51683 1 T G - Both SNP 0004.scaffold00019 51868 1 G A scaffold4204 Both SNP 0004.scaffold00019 51905 1 T A scaffold4204 Both SNP 0004.scaffold00019 51989 1 G A scaffold4204 Both INDEL 0004.scaffold00019 52050 2 AT .. scaffold4204 Both SNP 0004.scaffold00019 52170 1 T C scaffold4204 Both SNP 0004.scaffold00019 52340 1 A C scaffold4204 ReadM SNP 0004.scaffold00019 52958 1 C A - ReadM SNP 0004.scaffold00019 53129 1 T A - ReadM SNP 0004.scaffold00019 53181 1 G A - ReadM SNP 0004.scaffold00019 54323 1 C T - ReadM SNP 0004.scaffold00019 54337 1 T C - ReadM SNP 0004.scaffold00019 54724 1 G A - Both SNP 0004.scaffold00019 55641 1 C T scaffold4204 Both SNP 0004.scaffold00019 55670 1 A G scaffold4204 Both SNP 0004.scaffold00019 55815 1 C T scaffold4204 Both SNP 0004.scaffold00019 56045 1 T A scaffold4204 Both SNP 0004.scaffold00019 56549 1 A G scaffold4204 ReadM SNP 0004.scaffold00019 56644 1 G A - ReadM SNP 0004.scaffold00019 56896 1 C T - ReadM SNP 0004.scaffold00019 56928 1 G C - ReadM SNP 0004.scaffold00019 57034 1 A T - ReadM SNP 0004.scaffold00019 57171 1 T C - ReadM SNP 0004.scaffold00019 57630 1 T C - Both SNP 0004.scaffold00019 58595 1 T G scaffold4204 ReadM SNP 0004.scaffold00019 58707 1 A C - ReadM SNP 0004.scaffold00019 58796 1 T C - ReadM SNP 0004.scaffold00019 58811 1 A T - ReadM SNP 0004.scaffold00019 59247 1 T C - Both SNP 0004.scaffold00019 59348 1 A C scaffold4204 ReadM SNP 0004.scaffold00019 60172 1 A T - ReadM SNP 0004.scaffold00019 61013 1 C T - ReadM SNP 0004.scaffold00019 61312 1 T C - ReadM SNP 0004.scaffold00019 61841 1 C T - ReadM SNP 0004.scaffold00019 62196 1 T G - ReadM SNP 0004.scaffold00019 62364 1 A C - ReadM SNP 0004.scaffold00019 62371 1 A T - Both SNP 0004.scaffold00019 62813 1 A G scaffold4204 ScafM INDEL 0004.scaffold00019 62826 6 ...... TCTCTC scaffold4204 ScafM SNP 0004.scaffold00019 62976 1 G C scaffold4204 ScafM INDEL 0004.scaffold00019 63060 41 GAGAATTGGGTGTGACAAGTGGCAAAGTATTCTTGGTTCAT ......................................... scaffold4204 ReadM SNP 0004.scaffold00019 63091 1 C A - ReadM SNP 0004.scaffold00019 63733 1 C T - ReadM SNP 0004.scaffold00019 63959 1 G C - ReadM SNP 0004.scaffold00019 64094 1 A T - ReadM SNP 0004.scaffold00019 64225 1 A T - ReadM SNP 0004.scaffold00019 64553 1 A G - Both SNP 0004.scaffold00019 64750 1 A T scaffold4204 ReadM SNP 0004.scaffold00019 65192 1 T C - ReadM SNP 0004.scaffold00019 65244 1 A G - ReadM SNP 0004.scaffold00019 65252 1 A G - ReadM SNP 0004.scaffold00019 65502 1 A G - ReadM INDEL 0004.scaffold00019 65868 1 A . - ReadM SNP 0004.scaffold00019 66012 1 C A - ReadM SNP 0004.scaffold00019 66590 1 C A - ScafM INDEL 0004.scaffold00019 66797 5 ..... TGGAA scaffold4204 Both INDEL 0004.scaffold00019 67047 1 T . scaffold4204 Both SNP 0004.scaffold00019 67284 1 A C scaffold4204 Both SNP 0004.scaffold00019 67556 1 A T scaffold4204 Both SNP 0004.scaffold00019 67610 1 T A scaffold4204 Both SNP 0004.scaffold00019 68303 1 A T scaffold4204 Both SNP 0004.scaffold00019 69324 1 C T scaffold4204 Both SNP 0004.scaffold00019 69842 1 G T scaffold4204 Both SNP 0004.scaffold00019 69965 1 G A scaffold4204 ScafM SNP 0004.scaffold00019 70370 2 AG GA scaffold4204 Both SNP 0004.scaffold00019 70407 1 C A scaffold4204 ReadM SNP 0004.scaffold00019 71065 1 G T - ReadM SNP 0004.scaffold00019 71159 1 C T - ReadM SNP 0004.scaffold00019 71181 1 T A - ReadM SNP 0004.scaffold00019 87092 1 G A - ReadM SNP 0004.scaffold00019 88154 1 A G - ReadM SNP 0004.scaffold00019 88180 1 G A - ReadM SNP 0004.scaffold00019 88545 1 G A - ReadM SNP 0004.scaffold00019 89226 1 A G - ReadM SNP 0004.scaffold00019 89667 1 G A - Both SNP 0004.scaffold00019 90027 1 C T scaffold19381 ReadM SNP 0004.scaffold00019 90554 2 GT AA - ReadM SNP 0004.scaffold00019 91230 1 G A - ReadM SNP 0004.scaffold00019 92008 1 T G - ReadM SNP 0004.scaffold00019 92036 1 T A - ReadM SNP 0004.scaffold00019 92062 1 T C - Both SNP 0004.scaffold00019 92264 1 A T scaffold19381 Both SNP 0004.scaffold00019 92304 1 A T scaffold19381 Both SNP 0004.scaffold00019 92335 1 C T scaffold19381 ReadM SNP 0004.scaffold00019 92420 1 G A - ReadM SNP 0004.scaffold00019 92463 1 C T - ReadM SNP 0004.scaffold00019 92584 1 C T - ReadM SNP 0004.scaffold00019 92709 1 T C - ReadM SNP 0004.scaffold00019 92736 1 T C - ReadM SNP 0004.scaffold00019 93032 1 A G - ReadM SNP 0004.scaffold00019 93295 1 G A - ReadM SNP 0004.scaffold00019 93542 1 G A - ReadM SNP 0004.scaffold00019 93632 1 A G - ReadM SNP 0004.scaffold00019 93873 1 T C - ReadM SNP 0004.scaffold00019 93907 1 G A - ReadM SNP 0004.scaffold00019 94297 1 G T - ReadM SNP 0004.scaffold00019 94412 1 C T - ReadM SNP 0004.scaffold00019 94673 1 A G - Both SNP 0004.scaffold00019 94854 1 A G scaffold19381 Both SNP 0004.scaffold00019 95482 1 A G scaffold19381 ReadM SNP 0004.scaffold00019 96210 2 TT CC - ReadM SNP 0004.scaffold00019 96309 1 A G - ReadM SNP 0004.scaffold00019 96328 1 C T - ReadM SNP 0004.scaffold00019 96360 1 G A - ReadM SNP 0004.scaffold00019 96433 1 T G - ReadM SNP 0004.scaffold00019 97164 1 G A - ReadM SNP 0004.scaffold00019 97545 1 T C - ReadM SNP 0004.scaffold00019 97549 1 C T - ReadM INDEL 0004.scaffold00019 97804 1 A . - ReadM SNP 0004.scaffold00019 97940 1 C A - ReadM SNP 0004.scaffold00019 98365 1 T A - ReadM SNP 0004.scaffold00019 98393 1 G A - ReadM SNP 0004.scaffold00019 98425 1 A G - ReadM SNP 0004.scaffold00019 99154 1 T A - ReadM SNP 0004.scaffold00019 99242 1 A G - ReadM SNP 0004.scaffold00019 99483 1 G C - ReadM SNP 0004.scaffold00019 99565 1 C T - ReadM INDEL 0004.scaffold00019 99756 1 T . - Both SNP 0004.scaffold00019 100041 1 A G scaffold19381 Both SNP 0004.scaffold00019 100073 1 G A scaffold19381 ReadM SNP 0004.scaffold00019 100831 1 C T - ReadM SNP 0004.scaffold00019 100935 1 C T - ReadM SNP 0004.scaffold00019 101056 1 A T - ScafM SNP 0004.scaffold00019 105899 1 G A scaffold4916 ScafM SNP 0004.scaffold00019 105907 1 T A scaffold4916 ScafM SNP 0004.scaffold00019 105921 1 A C scaffold4916 ScafM SNP 0004.scaffold00019 105962 1 C G scaffold4916 ScafM SNP 0004.scaffold00019 105965 1 G T scaffold4916 ScafM SNP 0004.scaffold00019 105969 1 T C scaffold4916 ScafM SNP 0004.scaffold00019 106004 1 A G scaffold4916 ReadM SNP 0004.scaffold00019 107198 1 T A - ReadM SNP 0004.scaffold00019 107243 1 G C - ScafM SNP 0004.scaffold00019 118846 1 C A scaffold8057 Both INDEL 0004.scaffold00019 118951 1 T . scaffold8057 ScafM SNP 0004.scaffold00019 120341 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 120535 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 120612 1 C G - Both SNP 0004.scaffold00019 120740 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 121229 1 A G - ReadM SNP 0004.scaffold00019 121340 1 A C - ReadM SNP 0004.scaffold00019 121805 1 G C - ReadM SNP 0004.scaffold00019 122023 1 A C - ReadM SNP 0004.scaffold00019 123555 1 C T - ReadM SNP 0004.scaffold00019 123600 1 G A - ReadM SNP 0004.scaffold00019 123690 1 T G - ReadM SNP 0004.scaffold00019 124754 1 C A - ReadM SNP 0004.scaffold00019 125003 1 T A - ReadM SNP 0004.scaffold00019 125607 1 C A - ReadM SNP 0004.scaffold00019 125721 1 G A - ReadM SNP 0004.scaffold00019 126033 1 T C - ReadM SNP 0004.scaffold00019 126236 1 C T - ReadM SNP 0004.scaffold00019 126893 1 T C - ReadM SNP 0004.scaffold00019 127268 1 T C - Both SNP 0004.scaffold00019 127898 1 T C scaffold8057 Both SNP 0004.scaffold00019 128954 1 A G scaffold8057 Both SNP 0004.scaffold00019 128999 1 T C scaffold8057 Both SNP 0004.scaffold00019 129168 1 T C scaffold8057 ReadM SNP 0004.scaffold00019 129320 1 T C - ReadM SNP 0004.scaffold00019 129390 1 A T - ReadM SNP 0004.scaffold00019 130560 1 A G - ReadM SNP 0004.scaffold00019 130651 1 T A - ReadM SNP 0004.scaffold00019 131530 1 A T - ReadM SNP 0004.scaffold00019 131678 1 A G - ReadM SNP 0004.scaffold00019 132169 1 A G - ReadM SNP 0004.scaffold00019 132430 1 C T - ReadM INDEL 0004.scaffold00019 132952 1 A . - ReadM INDEL 0004.scaffold00019 133042 2 AA .. - ReadM SNP 0004.scaffold00019 133897 1 T C - ReadM SNP 0004.scaffold00019 134042 1 C T - ReadM SNP 0004.scaffold00019 134076 1 A C - Both SNP 0004.scaffold00019 134122 1 T G scaffold8057 Both SNP 0004.scaffold00019 134233 1 T C scaffold8057 ReadM SNP 0004.scaffold00019 134355 1 A G - ReadM SNP 0004.scaffold00019 134361 1 C T - ReadM SNP 0004.scaffold00019 134390 1 G A - ReadM SNP 0004.scaffold00019 134392 1 G T - ReadM SNP 0004.scaffold00019 134761 1 T C - ReadM SNP 0004.scaffold00019 134931 1 G A - ReadM INDEL 0004.scaffold00019 135078 1 . A - ReadM SNP 0004.scaffold00019 135285 1 G C - ReadM SNP 0004.scaffold00019 135561 1 T A - ReadM SNP 0004.scaffold00019 136561 1 C T - ReadM SNP 0004.scaffold00019 136886 1 T A - ReadM SNP 0004.scaffold00019 136912 1 T A - ReadM SNP 0004.scaffold00019 137493 1 G A - ReadM SNP 0004.scaffold00019 137532 1 C G - ReadM SNP 0004.scaffold00019 137564 1 T G - ReadM SNP 0004.scaffold00019 137957 1 C T - Both SNP 0004.scaffold00019 138860 1 A G scaffold8057 ReadM SNP 0004.scaffold00019 139078 1 C T - Both SNP 0004.scaffold00019 139567 1 G A scaffold8057 Both SNP 0004.scaffold00019 139708 1 A T scaffold8057 Both SNP 0004.scaffold00019 139773 1 T G scaffold8057 Both SNP 0004.scaffold00019 139866 1 G A scaffold8057 Both SNP 0004.scaffold00019 139958 1 C G scaffold8057 ReadM SNP 0004.scaffold00019 140003 1 A C - ReadM SNP 0004.scaffold00019 140018 1 C T - ReadM SNP 0004.scaffold00019 140134 1 T G - ReadM SNP 0004.scaffold00019 140191 1 C T - ReadM SNP 0004.scaffold00019 140249 1 G A - ReadM SNP 0004.scaffold00019 140980 1 C G - ReadM SNP 0004.scaffold00019 141139 1 T C - ReadM SNP 0004.scaffold00019 141152 1 C T - ReadM SNP 0004.scaffold00019 144183 1 G A - ReadM SNP 0004.scaffold00019 144435 1 G A - ReadM SNP 0004.scaffold00019 145062 1 A T - ReadM SNP 0004.scaffold00019 145247 1 C T - ReadM SNP 0004.scaffold00019 145626 1 T G - ReadM SNP 0004.scaffold00019 145664 1 C T - ReadM SNP 0004.scaffold00019 145719 1 C T - ReadM SNP 0004.scaffold00019 146035 1 T A - ReadM SNP 0004.scaffold00019 146108 1 C A - ReadM SNP 0004.scaffold00019 146141 1 C T - ReadM SNP 0004.scaffold00019 146672 1 A T - ReadM SNP 0004.scaffold00019 147314 1 A G - ReadM SNP 0004.scaffold00019 147508 1 C A - ReadM SNP 0004.scaffold00019 147725 1 T C - Both SNP 0004.scaffold00019 147990 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 148616 1 T C - ScafM SNP 0004.scaffold00019 152088 1 G A scaffold8057 Both SNP 0004.scaffold00019 152985 1 C A scaffold8057 ReadM SNP 0004.scaffold00019 153247 1 C T - ScafM SNP 0004.scaffold00019 153503 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 154906 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 155397 1 C T - ScafM SNP 0004.scaffold00019 155703 1 A G scaffold8057 Both SNP 0004.scaffold00019 156064 1 A G scaffold8057 ReadM SNP 0004.scaffold00019 156536 1 T C - ReadM INDEL 0004.scaffold00019 157004 1 . C - Both SNP 0004.scaffold00019 157146 1 G A scaffold8057 Both SNP 0004.scaffold00019 157608 1 A G scaffold8057 ReadM SNP 0004.scaffold00019 157876 1 A C - ReadM SNP 0004.scaffold00019 157913 1 G A - ScafM SNP 0004.scaffold00019 158749 2 CA TT scaffold8057 ScafM INDEL 0004.scaffold00019 158839 11 ........... TTTATCTTCAA scaffold8057 ScafM INDEL 0004.scaffold00019 158900 1 A . scaffold8057 Both SNP 0004.scaffold00019 159485 1 G C scaffold8057 Both SNP 0004.scaffold00019 159634 1 C T scaffold8057 Both SNP 0004.scaffold00019 159707 1 G T scaffold8057 ScafM INDEL 0004.scaffold00019 160619 33 ACGCAATTGAGCTTATCTCTAACTTCGATTTTG ................................. scaffold8057 ScafM INDEL 0004.scaffold00019 160654 1 G . scaffold8057 ScafM SNP 0004.scaffold00019 160660 1 A C scaffold8057 Both SNP 0004.scaffold00019 160771 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 163285 1 A G - Both SNP 0004.scaffold00019 163513 1 A G scaffold8057 ReadM SNP 0004.scaffold00019 164491 1 C A - ReadM SNP 0004.scaffold00019 164747 1 A C - ReadM SNP 0004.scaffold00019 165636 1 G T - ReadM SNP 0004.scaffold00019 165851 1 T C - ReadM INDEL 0004.scaffold00019 166112 1 C . - ReadM INDEL 0004.scaffold00019 166413 3 TTA ... - ReadM SNP 0004.scaffold00019 166778 1 A G - ReadM SNP 0004.scaffold00019 166838 1 C T - ReadM SNP 0004.scaffold00019 166868 1 T C - ReadM SNP 0004.scaffold00019 167073 1 C G - ReadM SNP 0004.scaffold00019 167455 1 G T - ReadM SNP 0004.scaffold00019 167908 1 A C - ReadM SNP 0004.scaffold00019 168056 1 T C - Both SNP 0004.scaffold00019 168635 1 C T scaffold8057 Both SNP 0004.scaffold00019 168850 1 T C scaffold8057 ReadM SNP 0004.scaffold00019 169153 1 C A - ReadM SNP 0004.scaffold00019 169402 1 C T - Both SNP 0004.scaffold00019 169959 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 170599 1 C T - ReadM SNP 0004.scaffold00019 170710 1 T A - Both SNP 0004.scaffold00019 171307 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 171471 1 G A - ReadM SNP 0004.scaffold00019 171536 1 A G - ReadM SNP 0004.scaffold00019 172241 1 A G - Both SNP 0004.scaffold00019 172561 1 C T scaffold8057 Both SNP 0004.scaffold00019 172626 1 G A scaffold8057 Both INDEL 0004.scaffold00019 172859 1 . T scaffold8057 Both SNP 0004.scaffold00019 172911 1 C G scaffold8057 Both SNP 0004.scaffold00019 173165 1 T G scaffold8057 Both SNP 0004.scaffold00019 173273 1 T C scaffold8057 Both SNP 0004.scaffold00019 173774 1 C G scaffold8057 Both INDEL 0004.scaffold00019 174098 1 C . scaffold8057 Both SNP 0004.scaffold00019 174321 1 G A scaffold8057 Both SNP 0004.scaffold00019 174517 1 C T scaffold8057 ScafM INDEL 0004.scaffold00019 174593 1 . T scaffold8057 Both SNP 0004.scaffold00019 174899 1 C T scaffold8057 Both SNP 0004.scaffold00019 177323 1 G C scaffold8057 Both SNP 0004.scaffold00019 177554 1 T C scaffold8057 Both SNP 0004.scaffold00019 177637 1 T G scaffold8057 ScafM SNP 0004.scaffold00019 178005 1 A G scaffold8057 Both SNP 0004.scaffold00019 178117 1 A G scaffold8057 Both SNP 0004.scaffold00019 178962 1 T C scaffold8057 Both SNP 0004.scaffold00019 178967 1 T C scaffold8057 Both SNP 0004.scaffold00019 179814 1 A G scaffold8057 Both SNP 0004.scaffold00019 179963 1 G C scaffold8057 ScafM SNP 0004.scaffold00019 180300 1 A G scaffold8057 Both SNP 0004.scaffold00019 180458 1 T C scaffold8057 Both SNP 0004.scaffold00019 181293 1 G A scaffold8057 Both SNP 0004.scaffold00019 181597 1 T A scaffold8057 Both SNP 0004.scaffold00019 181644 1 A C scaffold8057 Both SNP 0004.scaffold00019 181818 1 G T scaffold8057 Both SNP 0004.scaffold00019 182064 1 T G scaffold8057 Both INDEL 0004.scaffold00019 182089 2 .. TT scaffold8057 ScafM INDEL 0004.scaffold00019 182099 14 .............. CACTATTTCTCTAC scaffold8057 ScafM INDEL 0004.scaffold00019 182100 3 ... GGC scaffold8057 ScafM INDEL 0004.scaffold00019 182273 13 ............. GTTGGTGGTGTAC scaffold8057 ScafM INDEL 0004.scaffold00019 182341 4 TCAT .... scaffold8057 ScafM SNP 0004.scaffold00019 182361 1 T G scaffold8057 ReadM INDEL 0004.scaffold00019 182429 1 T . - ReadM SNP 0004.scaffold00019 182451 1 C T - ReadM SNP 0004.scaffold00019 182469 1 C T - Both SNP 0004.scaffold00019 182655 1 T A scaffold8057 Both SNP 0004.scaffold00019 182735 1 A C scaffold8057 Both SNP 0004.scaffold00019 182819 1 C T scaffold8057 Both SNP 0004.scaffold00019 182823 1 G C scaffold8057 ScafM INDEL 0004.scaffold00019 182835 7 ....... GATAACC scaffold8057 ScafM INDEL 0004.scaffold00019 182836 3 ... TTG scaffold8057 ScafM SNP 0004.scaffold00019 182906 1 C A scaffold8057 ScafM INDEL 0004.scaffold00019 182947 3 AAA ... scaffold8057 ScafM INDEL 0004.scaffold00019 182953 4 CTAT .... scaffold8057 ScafM INDEL 0004.scaffold00019 182960 3 ATT ... scaffold8057 ScafM SNP 0004.scaffold00019 182982 1 G A scaffold8057 Both SNP 0004.scaffold00019 183044 1 C T scaffold8057 Both SNP 0004.scaffold00019 183086 1 T C scaffold8057 ScafM SNP 0004.scaffold00019 183091 1 C A scaffold8057 ScafM SNP 0004.scaffold00019 183103 1 C G scaffold8057 ScafM INDEL 0004.scaffold00019 183110 3 ... AAC scaffold8057 ScafM INDEL 0004.scaffold00019 183111 3 ..T ACA scaffold8057 ScafM SNP 0004.scaffold00019 183114 1 C A scaffold8057 ScafM SNP 0004.scaffold00019 183116 1 C G scaffold8057 ScafM INDEL 0004.scaffold00019 183117 3 ... AAA scaffold8057 ScafM SNP 0004.scaffold00019 183119 1 T A scaffold8057 ScafM INDEL 0004.scaffold00019 183120 1 . G scaffold8057 ScafM INDEL 0004.scaffold00019 183122 1 . A scaffold8057 ScafM INDEL 0004.scaffold00019 183123 3 ... CTC scaffold8057 ScafM INDEL 0004.scaffold00019 183128 1 C . scaffold8057 ScafM SNP 0004.scaffold00019 183131 1 A T scaffold8057 ScafM SNP 0004.scaffold00019 183133 1 A T scaffold8057 ScafM SNP 0004.scaffold00019 183135 2 AC TT scaffold8057 ScafM SNP 0004.scaffold00019 183138 1 C A scaffold8057 ScafM INDEL 0004.scaffold00019 183142 1 . T scaffold8057 ScafM SNP 0004.scaffold00019 183144 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 183146 4 AAAA CTCG scaffold8057 ScafM SNP 0004.scaffold00019 183152 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 183206 1 G C scaffold8057 ScafM SNP 0004.scaffold00019 183266 1 C T scaffold8057 ScafM INDEL 0004.scaffold00019 183291 11 CCATACTGAAG ........... scaffold8057 ScafM INDEL 0004.scaffold00019 183303 1 G . scaffold8057 ScafM SNP 0004.scaffold00019 183351 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 183358 1 T C scaffold8057 ScafM SNP 0004.scaffold00019 183388 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 183753 1 A T scaffold1533 ScafM INDEL 0004.scaffold00019 183844 1 A . scaffold1533 ScafM SNP 0004.scaffold00019 184012 1 T C scaffold1533 ScafM SNP 0004.scaffold00019 184645 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 184665 1 T G scaffold8057 ReadM INDEL 0004.scaffold00019 185187 1 . A - ReadM SNP 0004.scaffold00019 185264 1 A T - ReadM SNP 0004.scaffold00019 185298 1 G A - ReadM SNP 0004.scaffold00019 185311 1 C T - ReadM SNP 0004.scaffold00019 185353 1 T C - ReadM SNP 0004.scaffold00019 185481 1 T G - ReadM SNP 0004.scaffold00019 185525 1 A C - ReadM SNP 0004.scaffold00019 185541 1 T C - ReadM SNP 0004.scaffold00019 185591 1 T C - Both SNP 0004.scaffold00019 185644 1 T C scaffold8057 Both SNP 0004.scaffold00019 185678 1 A T scaffold8057 ReadM SNP 0004.scaffold00019 185718 1 T C - ReadM SNP 0004.scaffold00019 185811 1 A G - ReadM SNP 0004.scaffold00019 185865 1 T C - ReadM SNP 0004.scaffold00019 185884 1 G A - ReadM SNP 0004.scaffold00019 185921 1 T C - Both SNP 0004.scaffold00019 185968 1 T G scaffold8057 Both SNP 0004.scaffold00019 185994 1 G A scaffold8057 Both SNP 0004.scaffold00019 186001 1 G T scaffold8057 Both SNP 0004.scaffold00019 186034 1 C T scaffold8057 Both INDEL 0004.scaffold00019 186113 1 C . scaffold8057 ScafM SNP 0004.scaffold00019 186115 1 T C scaffold8057 ScafM SNP 0004.scaffold00019 186129 1 C A scaffold8057 ReadM SNP 0004.scaffold00019 186184 1 G T - ReadM SNP 0004.scaffold00019 186206 1 G A - ReadM SNP 0004.scaffold00019 186214 1 C T - ReadM SNP 0004.scaffold00019 186310 1 C T - ReadM SNP 0004.scaffold00019 186353 1 C G - ReadM SNP 0004.scaffold00019 186409 1 G A - ReadM INDEL 0004.scaffold00019 186436 1 T . - ReadM INDEL 0004.scaffold00019 186495 1 C . - ReadM SNP 0004.scaffold00019 186526 1 C T - Both SNP 0004.scaffold00019 186531 1 G A scaffold8057 Both SNP 0004.scaffold00019 186578 1 A G scaffold8057 Both SNP 0004.scaffold00019 186582 1 A T scaffold8057 Both SNP 0004.scaffold00019 186654 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 186688 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 186697 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 186706 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 186974 1 T G scaffold8057 ScafM SNP 0004.scaffold00019 187015 1 T C scaffold8057 ScafM SNP 0004.scaffold00019 187036 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 187081 1 A T scaffold8057 ScafM INDEL 0004.scaffold00019 187228 4 ATCG .... scaffold8057 ScafM SNP 0004.scaffold00019 187239 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 188266 1 C T - ReadM SNP 0004.scaffold00019 188365 1 A C - ReadM SNP 0004.scaffold00019 188402 1 G A - ReadM SNP 0004.scaffold00019 188428 1 A C - ReadM SNP 0004.scaffold00019 188444 1 T C - ReadM SNP 0004.scaffold00019 188461 1 C T - ReadM SNP 0004.scaffold00019 188548 1 C T - ReadM SNP 0004.scaffold00019 188569 1 T C - ReadM SNP 0004.scaffold00019 188598 1 C T - ReadM SNP 0004.scaffold00019 188630 1 C T - ReadM SNP 0004.scaffold00019 188751 1 G A - ReadM SNP 0004.scaffold00019 188797 1 T C - ReadM SNP 0004.scaffold00019 188931 1 C T - ReadM SNP 0004.scaffold00019 188939 1 T C - ReadM SNP 0004.scaffold00019 188959 1 A G - ReadM SNP 0004.scaffold00019 189057 1 C T - ReadM SNP 0004.scaffold00019 189059 1 A G - ReadM SNP 0004.scaffold00019 189082 1 A G - ReadM SNP 0004.scaffold00019 189139 1 A G - ReadM SNP 0004.scaffold00019 189147 1 C T - ReadM SNP 0004.scaffold00019 189221 1 C T - ReadM SNP 0004.scaffold00019 189231 1 A C - ReadM SNP 0004.scaffold00019 189444 1 C T - ReadM SNP 0004.scaffold00019 189465 1 C T - ScafM INDEL 0004.scaffold00019 190870 1 . A scaffold8057 ScafM SNP 0004.scaffold00019 190934 1 A T scaffold8057 ScafM SNP 0004.scaffold00019 190961 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 191081 1 A T - ReadM SNP 0004.scaffold00019 191219 1 C T - ReadM SNP 0004.scaffold00019 191225 1 T A - ReadM SNP 0004.scaffold00019 191252 1 G C - ReadM SNP 0004.scaffold00019 191438 1 G A - ReadM INDEL 0004.scaffold00019 191445 1 A . - ReadM SNP 0004.scaffold00019 191496 1 T C - ReadM SNP 0004.scaffold00019 191542 1 G A - ReadM SNP 0004.scaffold00019 191703 1 T C - ReadM SNP 0004.scaffold00019 191737 1 A G - ReadM SNP 0004.scaffold00019 191828 1 A C - ReadM SNP 0004.scaffold00019 192017 1 C T - ReadM SNP 0004.scaffold00019 192022 1 C T - ScafM SNP 0004.scaffold00019 192078 1 C A scaffold8057 ScafM SNP 0004.scaffold00019 192080 1 G C scaffold8057 ReadM SNP 0004.scaffold00019 192130 1 T C - ReadM SNP 0004.scaffold00019 192276 1 G A - Both SNP 0004.scaffold00019 192325 1 A G scaffold8057 ScafM INDEL 0004.scaffold00019 192363 3 ... ATT scaffold8057 Both SNP 0004.scaffold00019 192373 1 G T scaffold8057 Both SNP 0004.scaffold00019 192407 1 T A scaffold8057 Both SNP 0004.scaffold00019 192469 1 A C scaffold8057 Both SNP 0004.scaffold00019 192517 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 192664 1 T G - ReadM SNP 0004.scaffold00019 192718 1 T A - ScafM SNP 0004.scaffold00019 192909 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 192912 1 C A scaffold8057 ScafM SNP 0004.scaffold00019 192928 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 192961 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 193006 1 T A scaffold8057 ScafM SNP 0004.scaffold00019 193009 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 193015 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 193055 1 A G scaffold8057 ScafM INDEL 0004.scaffold00019 193289 2 AC .. scaffold8057 Both SNP 0004.scaffold00019 193705 1 A G scaffold8057 Both SNP 0004.scaffold00019 193851 1 C T scaffold8057 Both SNP 0004.scaffold00019 193947 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 194673 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 194713 1 T C scaffold8057 ScafM SNP 0004.scaffold00019 194811 1 T G scaffold8057 ScafM SNP 0004.scaffold00019 195025 1 C G scaffold8057 ScafM SNP 0004.scaffold00019 195030 1 T A scaffold8057 ScafM INDEL 0004.scaffold00019 195057 3 GGG ..C scaffold8057 ScafM SNP 0004.scaffold00019 195072 1 G T scaffold8057 ScafM SNP 0004.scaffold00019 196133 1 A C scaffold8057 ScafM INDEL 0004.scaffold00019 196452 2 .. TT scaffold8057 Both SNP 0004.scaffold00019 196617 1 C A scaffold8057 ReadM SNP 0004.scaffold00019 196822 1 T C - ReadM SNP 0004.scaffold00019 196881 1 T C - ReadM SNP 0004.scaffold00019 196918 1 A G - ReadM INDEL 0004.scaffold00019 196955 1 . A - ReadM SNP 0004.scaffold00019 197066 1 T C - Both SNP 0004.scaffold00019 197115 1 G A scaffold8057 Both SNP 0004.scaffold00019 197152 1 T G scaffold8057 Both SNP 0004.scaffold00019 197236 1 A G scaffold8057 Both SNP 0004.scaffold00019 197380 1 T C scaffold8057 Both SNP 0004.scaffold00019 197397 1 A G scaffold8057 Both SNP 0004.scaffold00019 197558 1 C A scaffold8057 Both SNP 0004.scaffold00019 197708 1 A T scaffold8057 Both SNP 0004.scaffold00019 197793 1 C T scaffold8057 Both SNP 0004.scaffold00019 198017 1 T C scaffold8057 Both SNP 0004.scaffold00019 198048 1 C T scaffold8057 Both SNP 0004.scaffold00019 198141 1 T A scaffold8057 ScafM INDEL 0004.scaffold00019 198206 1 A . scaffold8057 ScafM INDEL 0004.scaffold00019 198218 3 ..G CTT scaffold8057 ScafM INDEL 0004.scaffold00019 198259 1 . T scaffold8057 ReadM INDEL 0004.scaffold00019 198348 1 . A - ReadM SNP 0004.scaffold00019 198393 1 G A - ScafM SNP 0004.scaffold00019 198558 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 198593 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 198631 1 T G scaffold8057 ScafM SNP 0004.scaffold00019 198689 1 T A scaffold8057 ScafM SNP 0004.scaffold00019 198743 1 G A scaffold8057 ScafM INDEL 0004.scaffold00019 198794 2 .. GA scaffold8057 ScafM SNP 0004.scaffold00019 198815 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 198828 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 198949 1 G A - ReadM SNP 0004.scaffold00019 199003 1 T C - ReadM SNP 0004.scaffold00019 199061 1 T G - Both SNP 0004.scaffold00019 199398 1 C A scaffold8057 Both SNP 0004.scaffold00019 199441 1 C T scaffold8057 Both SNP 0004.scaffold00019 199480 1 C T scaffold8057 Both SNP 0004.scaffold00019 199555 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 199578 1 A G scaffold8057 ScafM INDEL 0004.scaffold00019 199580 1 T . scaffold8057 ScafM INDEL 0004.scaffold00019 199584 1 G . scaffold8057 ScafM INDEL 0004.scaffold00019 199586 1 T . scaffold8057 ScafM INDEL 0004.scaffold00019 199589 1 C . scaffold8057 ScafM SNP 0004.scaffold00019 199591 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 199593 1 A G scaffold8057 ScafM INDEL 0004.scaffold00019 199595 4 CCCG .AAT scaffold8057 ScafM INDEL 0004.scaffold00019 199613 3 ... GTT scaffold8057 ScafM SNP 0004.scaffold00019 199668 1 A C scaffold8057 ScafM INDEL 0004.scaffold00019 199680 18 .................. CCACTGTCCATTAATTAT scaffold8057 Both SNP 0004.scaffold00019 199736 1 C T scaffold8057 ScafM INDEL 0004.scaffold00019 199825 39 AACCGACCCATTTTGACCCACCGGTACCCGACCCGCATG ....................................... scaffold8057 Both SNP 0004.scaffold00019 199883 1 T C scaffold8057 ReadM SNP 0004.scaffold00019 200106 1 T C - ReadM SNP 0004.scaffold00019 200118 1 A T - ReadM SNP 0004.scaffold00019 200416 1 C T - ReadM SNP 0004.scaffold00019 200449 1 A G - ReadM SNP 0004.scaffold00019 200454 1 G A - Both SNP 0004.scaffold00019 200635 1 T A scaffold8057 Both SNP 0004.scaffold00019 200664 1 C T scaffold8057 ReadM SNP 0004.scaffold00019 200742 1 G A - ReadM SNP 0004.scaffold00019 200749 1 G A - ReadM SNP 0004.scaffold00019 200815 1 A G - ReadM SNP 0004.scaffold00019 200921 1 T A - ReadM SNP 0004.scaffold00019 201123 1 A G - ReadM SNP 0004.scaffold00019 201178 1 A T - ReadM INDEL 0004.scaffold00019 201228 1 . G - ReadM SNP 0004.scaffold00019 201308 1 C T - ReadM SNP 0004.scaffold00019 201374 1 G T - ReadM SNP 0004.scaffold00019 201426 1 A C - Both SNP 0004.scaffold00019 201488 1 T C scaffold8057 Both SNP 0004.scaffold00019 201545 1 A T scaffold8057 ScafM INDEL 0004.scaffold00019 201546 2 .. TT scaffold8057 ScafM SNP 0004.scaffold00019 201557 1 G T scaffold8057 Both SNP 0004.scaffold00019 201669 1 T C scaffold8057 Both SNP 0004.scaffold00019 201757 1 A C scaffold8057 ReadM SNP 0004.scaffold00019 201884 1 A C - ReadM SNP 0004.scaffold00019 201897 1 A G - ReadM SNP 0004.scaffold00019 201982 1 G A - ReadM SNP 0004.scaffold00019 202046 1 T A - ReadM SNP 0004.scaffold00019 202161 1 C T - ReadM SNP 0004.scaffold00019 202219 1 C T - ReadM SNP 0004.scaffold00019 202600 1 G A - ReadM SNP 0004.scaffold00019 202766 1 T C - ScafM SNP 0004.scaffold00019 203007 1 G T scaffold8057 ReadM SNP 0004.scaffold00019 203216 1 A G - ReadM SNP 0004.scaffold00019 203245 1 C T - ReadM SNP 0004.scaffold00019 203266 1 C T - ReadM SNP 0004.scaffold00019 203281 1 G A - ReadM SNP 0004.scaffold00019 203387 1 C A - ReadM SNP 0004.scaffold00019 203421 1 G A - ReadM SNP 0004.scaffold00019 203639 1 C A - ReadM SNP 0004.scaffold00019 203750 1 T C - ReadM SNP 0004.scaffold00019 203753 1 T G - ReadM SNP 0004.scaffold00019 203759 1 G A - ReadM SNP 0004.scaffold00019 203934 1 A G - ReadM SNP 0004.scaffold00019 204001 1 C A - ReadM SNP 0004.scaffold00019 204244 1 G A - ReadM SNP 0004.scaffold00019 204269 1 T C - ReadM SNP 0004.scaffold00019 204400 1 C A - ReadM SNP 0004.scaffold00019 204402 1 T A - ReadM SNP 0004.scaffold00019 204589 1 A G - ReadM SNP 0004.scaffold00019 204595 1 T C - ReadM SNP 0004.scaffold00019 204620 1 T A - ReadM SNP 0004.scaffold00019 204674 1 C G - ReadM SNP 0004.scaffold00019 204755 1 T G - ReadM SNP 0004.scaffold00019 204931 1 G A - ReadM SNP 0004.scaffold00019 204977 1 A C - ReadM SNP 0004.scaffold00019 205114 1 C T - ScafM SNP 0004.scaffold00019 205838 1 A G scaffold8057 ScafM INDEL 0004.scaffold00019 205851 5 AGGAG ..... scaffold8057 ScafM SNP 0004.scaffold00019 205861 1 C T scaffold8057 ScafM SNP 0004.scaffold00019 206157 1 C G scaffold8057 Both SNP 0004.scaffold00019 206987 1 T C scaffold8057 Both SNP 0004.scaffold00019 207011 1 T C scaffold8057 Both SNP 0004.scaffold00019 207114 1 A G scaffold8057 Both SNP 0004.scaffold00019 207187 1 A G scaffold8057 Both SNP 0004.scaffold00019 207202 1 G C scaffold8057 Both INDEL 0004.scaffold00019 207251 1 . A scaffold8057 Both SNP 0004.scaffold00019 207272 1 A G scaffold8057 Both SNP 0004.scaffold00019 207299 1 G A scaffold8057 Both SNP 0004.scaffold00019 207376 1 C T scaffold8057 Both SNP 0004.scaffold00019 207410 1 A G scaffold8057 Both SNP 0004.scaffold00019 207586 2 CG TT scaffold8057 Both SNP 0004.scaffold00019 207623 1 A T scaffold8057 ReadM SNP 0004.scaffold00019 207674 1 G T - ReadM SNP 0004.scaffold00019 207723 1 T C - Both SNP 0004.scaffold00019 207902 1 C A scaffold8057 ReadM INDEL 0004.scaffold00019 208004 1 T . - ReadM SNP 0004.scaffold00019 208045 1 C A - ReadM SNP 0004.scaffold00019 208135 1 A C - ReadM SNP 0004.scaffold00019 208137 1 G T - ReadM SNP 0004.scaffold00019 208179 1 T A - ReadM SNP 0004.scaffold00019 208332 1 C T - ReadM SNP 0004.scaffold00019 208361 1 C G - ReadM SNP 0004.scaffold00019 208471 1 C A - ReadM SNP 0004.scaffold00019 208563 1 A G - ReadM SNP 0004.scaffold00019 208732 1 C T - ReadM SNP 0004.scaffold00019 208804 1 C T - ReadM SNP 0004.scaffold00019 208896 1 C T - ReadM SNP 0004.scaffold00019 208945 1 T A - ReadM SNP 0004.scaffold00019 208948 1 A G - ReadM INDEL 0004.scaffold00019 209013 1 . G - ReadM SNP 0004.scaffold00019 209037 1 T C - ReadM SNP 0004.scaffold00019 209144 1 G C - ReadM SNP 0004.scaffold00019 209365 1 A T - ReadM SNP 0004.scaffold00019 209828 1 A C - ReadM SNP 0004.scaffold00019 209851 1 G C - ReadM SNP 0004.scaffold00019 209944 1 G C - ReadM SNP 0004.scaffold00019 210200 1 T C - ReadM INDEL 0004.scaffold00019 210235 1 . A - ReadM SNP 0004.scaffold00019 210244 1 G A - ReadM SNP 0004.scaffold00019 210341 1 C A - ReadM SNP 0004.scaffold00019 210408 1 A G - ReadM SNP 0004.scaffold00019 210494 1 C A - ReadM SNP 0004.scaffold00019 210543 1 A T - ReadM SNP 0004.scaffold00019 210560 1 T C - ReadM SNP 0004.scaffold00019 210595 1 C T - ReadM SNP 0004.scaffold00019 210722 1 A T - ReadM SNP 0004.scaffold00019 210762 1 C A - ReadM SNP 0004.scaffold00019 210770 1 A G - ReadM SNP 0004.scaffold00019 210801 1 C G - ReadM SNP 0004.scaffold00019 210862 1 A T - ReadM SNP 0004.scaffold00019 211030 1 G C - ReadM SNP 0004.scaffold00019 211192 1 T G - ReadM SNP 0004.scaffold00019 211208 1 C A - ReadM SNP 0004.scaffold00019 211264 1 A T - ReadM SNP 0004.scaffold00019 211574 1 A C - ReadM SNP 0004.scaffold00019 211586 1 G C - ReadM SNP 0004.scaffold00019 211612 1 G C - ReadM SNP 0004.scaffold00019 211647 1 G A - ReadM SNP 0004.scaffold00019 211742 1 T G - ReadM SNP 0004.scaffold00019 211853 1 A G - ReadM SNP 0004.scaffold00019 211870 1 T A - ReadM SNP 0004.scaffold00019 211899 1 C T - ReadM SNP 0004.scaffold00019 211993 1 T C - ReadM SNP 0004.scaffold00019 212014 1 A G - ReadM SNP 0004.scaffold00019 212097 1 A G - ReadM SNP 0004.scaffold00019 212194 1 T C - ReadM SNP 0004.scaffold00019 212263 1 C T - ReadM SNP 0004.scaffold00019 212475 1 T C - ReadM SNP 0004.scaffold00019 212535 1 G A - Both SNP 0004.scaffold00019 212617 1 G T scaffold8057 Both SNP 0004.scaffold00019 212629 1 A G scaffold8057 Both SNP 0004.scaffold00019 212664 1 T G scaffold8057 ReadM SNP 0004.scaffold00019 212782 1 A G - Both SNP 0004.scaffold00019 212794 1 T C scaffold8057 Both SNP 0004.scaffold00019 212806 1 T A scaffold8057 Both SNP 0004.scaffold00019 212834 1 C T scaffold8057 Both SNP 0004.scaffold00019 212868 1 T C scaffold8057 ScafM INDEL 0004.scaffold00019 212924 42 TGTCACTCTCACCGCGCCGCTTGTCACTCTCACCGTGCCGCT .......................................... scaffold8057 ReadM SNP 0004.scaffold00019 212940 1 C T - ReadM SNP 0004.scaffold00019 212959 1 T C - Both SNP 0004.scaffold00019 213287 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 213579 1 C T - ReadM SNP 0004.scaffold00019 213623 1 A G - ReadM SNP 0004.scaffold00019 213687 1 A T - ReadM SNP 0004.scaffold00019 213751 1 A C - ReadM SNP 0004.scaffold00019 213766 1 T G - ReadM SNP 0004.scaffold00019 213821 1 C T - ReadM SNP 0004.scaffold00019 213838 1 T A - ReadM SNP 0004.scaffold00019 213872 1 G A - ReadM SNP 0004.scaffold00019 214580 1 T C - ReadM SNP 0004.scaffold00019 214658 1 C A - ReadM SNP 0004.scaffold00019 214792 1 A G - ReadM SNP 0004.scaffold00019 214810 1 G C - ReadM SNP 0004.scaffold00019 214837 1 G A - ReadM SNP 0004.scaffold00019 214881 1 C T - ReadM SNP 0004.scaffold00019 214894 1 A G - ReadM SNP 0004.scaffold00019 214949 1 T C - ReadM SNP 0004.scaffold00019 215128 1 T G - ReadM SNP 0004.scaffold00019 215167 1 A G - ReadM SNP 0004.scaffold00019 215307 1 T C - ReadM SNP 0004.scaffold00019 215318 1 T G - ReadM SNP 0004.scaffold00019 215560 1 A G - ReadM SNP 0004.scaffold00019 215705 1 G C - ReadM SNP 0004.scaffold00019 215876 1 C T - ReadM SNP 0004.scaffold00019 216057 1 G A - ReadM INDEL 0004.scaffold00019 216261 2 .. TA - ReadM SNP 0004.scaffold00019 216274 1 T C - ReadM SNP 0004.scaffold00019 216483 1 C T - ReadM SNP 0004.scaffold00019 216919 1 T C - ReadM SNP 0004.scaffold00019 216935 1 C T - ReadM SNP 0004.scaffold00019 217141 1 T C - ReadM SNP 0004.scaffold00019 217201 1 C T - ReadM SNP 0004.scaffold00019 217225 1 T A - ReadM SNP 0004.scaffold00019 217288 1 T G - ReadM SNP 0004.scaffold00019 217350 1 A G - ReadM SNP 0004.scaffold00019 217389 1 T C - ReadM INDEL 0004.scaffold00019 217526 1 T . - ReadM SNP 0004.scaffold00019 217536 1 G C - ReadM SNP 0004.scaffold00019 217959 1 A C - ReadM SNP 0004.scaffold00019 217972 1 G C - ReadM SNP 0004.scaffold00019 218400 1 C A - ReadM SNP 0004.scaffold00019 219095 1 T C - ReadM SNP 0004.scaffold00019 219383 1 C T - ReadM SNP 0004.scaffold00019 219487 1 A C - ReadM SNP 0004.scaffold00019 219688 1 G A - ReadM SNP 0004.scaffold00019 219690 1 A G - ReadM SNP 0004.scaffold00019 219880 1 C A - ReadM SNP 0004.scaffold00019 219977 1 C T - ReadM SNP 0004.scaffold00019 220069 1 T C - ReadM SNP 0004.scaffold00019 220195 1 G T - ReadM SNP 0004.scaffold00019 220240 1 C T - ReadM SNP 0004.scaffold00019 220270 1 A T - Both SNP 0004.scaffold00019 220659 1 T A scaffold8057 ScafM SNP 0004.scaffold00019 220813 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 220942 1 G A scaffold8057 ScafM SNP 0004.scaffold00019 220953 1 T G scaffold8057 Both SNP 0004.scaffold00019 221055 1 A G scaffold8057 Both SNP 0004.scaffold00019 221128 1 T A scaffold8057 Both SNP 0004.scaffold00019 221280 1 A G scaffold8057 Both SNP 0004.scaffold00019 221286 1 A G scaffold8057 Both SNP 0004.scaffold00019 221411 1 T G scaffold8057 Both SNP 0004.scaffold00019 221681 1 T C scaffold8057 Both SNP 0004.scaffold00019 221730 1 G C scaffold8057 Both SNP 0004.scaffold00019 221786 1 C G scaffold8057 Both SNP 0004.scaffold00019 221863 1 G A scaffold8057 Both SNP 0004.scaffold00019 221914 1 A C scaffold8057 Both SNP 0004.scaffold00019 221931 1 A T scaffold8057 Both SNP 0004.scaffold00019 222110 1 A G scaffold8057 Both SNP 0004.scaffold00019 222198 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 222311 1 G T - ReadM SNP 0004.scaffold00019 222484 1 T C - Both SNP 0004.scaffold00019 222575 1 G A scaffold8057 ReadM SNP 0004.scaffold00019 222758 1 G A - ReadM SNP 0004.scaffold00019 222883 1 T C - ReadM SNP 0004.scaffold00019 223112 1 T C - ReadM SNP 0004.scaffold00019 223353 1 G T - ReadM SNP 0004.scaffold00019 223419 1 T C - ReadM SNP 0004.scaffold00019 223543 1 C T - ReadM SNP 0004.scaffold00019 223621 1 T G - ReadM INDEL 0004.scaffold00019 223933 1 . C - ReadM SNP 0004.scaffold00019 223998 1 T C - ReadM SNP 0004.scaffold00019 224016 1 A G - ReadM SNP 0004.scaffold00019 224021 1 A G - ReadM SNP 0004.scaffold00019 224089 1 T C - ReadM SNP 0004.scaffold00019 224183 1 C T - ReadM SNP 0004.scaffold00019 224220 1 G C - Both SNP 0004.scaffold00019 224306 1 G C scaffold8057 ReadM SNP 0004.scaffold00019 224392 1 T G - ReadM SNP 0004.scaffold00019 224419 1 A G - ReadM SNP 0004.scaffold00019 228950 1 G A - ReadM SNP 0004.scaffold00019 228987 1 C T - ReadM SNP 0004.scaffold00019 228992 1 A G - ReadM SNP 0004.scaffold00019 229113 1 G C - ReadM SNP 0004.scaffold00019 229154 1 G A - ReadM INDEL 0004.scaffold00019 229183 1 . T - ReadM SNP 0004.scaffold00019 229345 1 C A - ReadM SNP 0004.scaffold00019 229364 1 C A - ReadM SNP 0004.scaffold00019 229431 1 A T - ReadM SNP 0004.scaffold00019 229625 1 T C - ReadM SNP 0004.scaffold00019 229691 1 G A - ReadM SNP 0004.scaffold00019 229721 1 A G - ReadM SNP 0004.scaffold00019 229730 1 T C - ReadM SNP 0004.scaffold00019 229773 1 C G - ReadM SNP 0004.scaffold00019 229789 1 T C - ReadM SNP 0004.scaffold00019 229849 1 G A - ReadM SNP 0004.scaffold00019 229909 1 G C - ReadM SNP 0004.scaffold00019 230010 1 G C - ReadM SNP 0004.scaffold00019 230017 1 G T - ReadM SNP 0004.scaffold00019 230042 1 C A - ScafM SNP 0004.scaffold00019 231770 1 A G scaffold8057 ScafM SNP 0004.scaffold00019 231773 1 A G scaffold8057 ReadM SNP 0004.scaffold00019 232012 1 A C - ReadM SNP 0004.scaffold00019 232047 1 C T - ReadM SNP 0004.scaffold00019 232136 1 G C - ReadM SNP 0004.scaffold00019 232201 1 G A - ReadM SNP 0004.scaffold00019 232232 1 A C - ReadM SNP 0004.scaffold00019 232461 1 A G - ReadM SNP 0004.scaffold00019 232496 1 G A - ReadM SNP 0004.scaffold00019 232542 1 T C - ReadM SNP 0004.scaffold00019 232559 1 G T - ReadM SNP 0004.scaffold00019 232704 1 T A - ReadM SNP 0004.scaffold00019 232721 1 C G - ReadM SNP 0004.scaffold00019 232783 1 T A - ReadM SNP 0004.scaffold00019 232800 1 T C - ReadM SNP 0004.scaffold00019 232905 1 C G - ReadM SNP 0004.scaffold00019 232913 1 A C - ReadM SNP 0004.scaffold00019 232959 1 G C - ReadM SNP 0004.scaffold00019 232984 1 T A - ReadM SNP 0004.scaffold00019 233074 1 T A - ReadM SNP 0004.scaffold00019 233122 1 A G - ReadM INDEL 0004.scaffold00019 233153 1 . A - ReadM INDEL 0004.scaffold00019 233232 1 . A - ReadM SNP 0004.scaffold00019 233309 1 G C - ReadM SNP 0004.scaffold00019 233338 1 G A - ReadM SNP 0004.scaffold00019 233487 1 T A - ReadM INDEL 0004.scaffold00019 233679 1 . C - ReadM SNP 0004.scaffold00019 233778 1 A G - ReadM SNP 0004.scaffold00019 233795 1 A C - ReadM SNP 0004.scaffold00019 233816 1 G A - ReadM SNP 0004.scaffold00019 233929 1 T G - ReadM SNP 0004.scaffold00019 233947 1 C G - ReadM SNP 0004.scaffold00019 234097 1 A T - ReadM SNP 0004.scaffold00019 234118 1 A C - ReadM SNP 0004.scaffold00019 234175 1 C T - ReadM SNP 0004.scaffold00019 234199 1 T C - ReadM SNP 0004.scaffold00019 234333 1 G C - ReadM SNP 0004.scaffold00019 234346 1 A G - ReadM SNP 0004.scaffold00019 234375 1 G C - ReadM SNP 0004.scaffold00019 234405 1 G C - ReadM SNP 0004.scaffold00019 234559 1 A G - ReadM SNP 0004.scaffold00019 234800 1 G A - ReadM SNP 0004.scaffold00019 234805 1 G T - ReadM SNP 0004.scaffold00019 234867 1 A G - ReadM SNP 0004.scaffold00019 234874 1 A C - ReadM SNP 0004.scaffold00019 234908 1 G A - ReadM SNP 0004.scaffold00019 235176 1 C T - ReadM SNP 0004.scaffold00019 235525 1 A T - ReadM SNP 0004.scaffold00019 235551 1 C T - ReadM SNP 0004.scaffold00019 235617 1 A G - ReadM SNP 0004.scaffold00019 235863 1 T C - ReadM SNP 0004.scaffold00019 236080 1 A G - ReadM SNP 0004.scaffold00019 236111 1 T A - ReadM SNP 0004.scaffold00019 236115 1 T C - ReadM SNP 0004.scaffold00019 236125 1 T C - ReadM SNP 0004.scaffold00019 236370 1 C T - ReadM SNP 0004.scaffold00019 236381 1 G T - ReadM SNP 0004.scaffold00019 236395 1 C A - ReadM SNP 0004.scaffold00019 236582 1 C T - ReadM SNP 0004.scaffold00019 236621 1 T A - ReadM SNP 0004.scaffold00019 236644 1 G T - ReadM SNP 0004.scaffold00019 236647 1 T G - ReadM SNP 0004.scaffold00019 237065 1 T C - ReadM SNP 0004.scaffold00019 237146 1 G A - ReadM SNP 0004.scaffold00019 237174 1 C T - ReadM SNP 0004.scaffold00019 237237 1 T C - ReadM SNP 0004.scaffold00019 237301 1 C A - ReadM SNP 0004.scaffold00019 237314 1 C T - ReadM SNP 0004.scaffold00019 237435 1 C G - ReadM SNP 0004.scaffold00019 237494 1 T A - ReadM SNP 0004.scaffold00019 237605 1 A G - ReadM SNP 0004.scaffold00019 237610 1 G A - ReadM SNP 0004.scaffold00019 237647 1 G A - ReadM SNP 0004.scaffold00019 237669 1 C T - ReadM SNP 0004.scaffold00019 237674 1 T C - ReadM INDEL 0004.scaffold00019 237716 1 . G - ReadM SNP 0004.scaffold00019 237807 1 C G - ReadM SNP 0004.scaffold00019 237826 1 A G - ReadM SNP 0004.scaffold00019 237946 1 C T - ReadM SNP 0004.scaffold00019 237976 1 G A - ReadM SNP 0004.scaffold00019 238031 1 A G - ReadM SNP 0004.scaffold00019 238107 1 A G - ReadM SNP 0004.scaffold00019 238446 1 T C - ReadM SNP 0004.scaffold00019 238509 1 A G - ReadM SNP 0004.scaffold00019 238513 1 C T - ReadM SNP 0004.scaffold00019 238584 1 T C - ReadM SNP 0004.scaffold00019 238675 1 C T - ReadM SNP 0004.scaffold00019 238835 1 C G - ReadM SNP 0004.scaffold00019 238881 1 G A - ReadM SNP 0004.scaffold00019 238934 1 T C - ReadM SNP 0004.scaffold00019 238996 1 C T - ReadM SNP 0004.scaffold00019 239002 1 T C - ReadM SNP 0004.scaffold00019 239071 1 C A - ReadM SNP 0004.scaffold00019 239143 1 C T - ReadM SNP 0004.scaffold00019 239196 1 G T - ReadM SNP 0004.scaffold00019 239220 1 G T - ReadM SNP 0004.scaffold00019 239260 1 A G - ReadM SNP 0004.scaffold00019 239268 1 C T - ReadM SNP 0004.scaffold00019 239333 1 T C - ReadM SNP 0004.scaffold00019 239337 1 G A - ReadM SNP 0004.scaffold00019 239388 1 T C - ReadM SNP 0004.scaffold00019 239487 1 A G - ReadM SNP 0004.scaffold00019 239507 1 G A - ReadM SNP 0004.scaffold00019 239527 1 C T - ReadM SNP 0004.scaffold00019 239608 2 AT CG - ReadM SNP 0004.scaffold00019 239746 1 T G - ReadM SNP 0004.scaffold00019 239787 1 T C - ReadM SNP 0004.scaffold00019 239978 1 T C - ReadM SNP 0004.scaffold00019 240046 1 C T - ReadM SNP 0004.scaffold00019 240142 1 C T - ReadM SNP 0004.scaffold00019 240171 1 G A - ReadM SNP 0004.scaffold00019 240207 1 A G - ReadM SNP 0004.scaffold00019 240354 1 C T - ReadM SNP 0004.scaffold00019 240364 1 G A - ReadM SNP 0004.scaffold00019 240387 1 C T - Both SNP 0004.scaffold00019 240443 1 G A scaffold8057 Both SNP 0004.scaffold00019 240452 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 240578 1 A C scaffold8057 ScafM SNP 0004.scaffold00019 240730 1 G A scaffold8057 Both INDEL 0004.scaffold00019 240760 1 . A scaffold8057 ReadM SNP 0004.scaffold00019 240792 1 A G - ReadM SNP 0004.scaffold00019 240998 1 G T - ReadM SNP 0004.scaffold00019 241936 1 T C - ReadM SNP 0004.scaffold00019 242079 1 T G - ReadM SNP 0004.scaffold00019 242215 1 G T - ReadM SNP 0004.scaffold00019 242513 1 A G - ReadM SNP 0004.scaffold00019 242525 1 A G - ReadM SNP 0004.scaffold00019 242634 1 G A - ReadM SNP 0004.scaffold00019 242678 1 A G - ReadM SNP 0004.scaffold00019 242834 1 G A - ReadM SNP 0004.scaffold00019 243102 1 T G - ReadM SNP 0004.scaffold00019 243119 1 C T - ReadM SNP 0004.scaffold00019 243269 1 C G - ReadM SNP 0004.scaffold00019 243343 1 A G - ReadM SNP 0004.scaffold00019 243409 1 A C - ReadM SNP 0004.scaffold00019 243430 1 T C - ReadM INDEL 0004.scaffold00019 243624 1 . A - ScafM INDEL 0004.scaffold00019 243624 2 .G AA scaffold18257 Both SNP 0004.scaffold00019 243678 1 C T scaffold18257 Both SNP 0004.scaffold00019 243690 1 C T scaffold18257 Both SNP 0004.scaffold00019 243737 1 T C scaffold18257 Both SNP 0004.scaffold00019 243835 1 C G scaffold18257 Both SNP 0004.scaffold00019 243860 1 C T scaffold18257 ScafM INDEL 0004.scaffold00019 243964 5 ATATG ..... scaffold18257 Both SNP 0004.scaffold00019 244021 1 T A scaffold18257 Both SNP 0004.scaffold00019 244052 1 C T scaffold18257 ReadM SNP 0004.scaffold00019 244107 1 A G - ReadM SNP 0004.scaffold00019 244175 1 T C - ReadM INDEL 0004.scaffold00019 244251 1 . C - ReadM SNP 0004.scaffold00019 244389 1 G C - ReadM SNP 0004.scaffold00019 244434 1 T C - ReadM SNP 0004.scaffold00019 244663 1 A T - ReadM SNP 0004.scaffold00019 244695 1 C G - Both SNP 0004.scaffold00019 244715 1 G C scaffold18257 Both SNP 0004.scaffold00019 244741 1 T A scaffold18257 Both SNP 0004.scaffold00019 244780 1 A G scaffold18257 Both SNP 0004.scaffold00019 244820 1 A G scaffold18257 Both SNP 0004.scaffold00019 244896 1 T G scaffold18257 ScafM SNP 0004.scaffold00019 244910 1 G C scaffold18257 ScafM INDEL 0004.scaffold00019 244913 3 GGT ... scaffold18257 ScafM SNP 0004.scaffold00019 244917 2 CG AC scaffold18257 Both SNP 0004.scaffold00019 244926 1 T G scaffold18257 Both INDEL 0004.scaffold00019 245007 1 . G scaffold18257 Both SNP 0004.scaffold00019 245064 1 C T scaffold18257 Both SNP 0004.scaffold00019 245071 1 T G scaffold18257 ReadM SNP 0004.scaffold00019 245169 1 G A - ReadM SNP 0004.scaffold00019 245197 1 T C - ReadM SNP 0004.scaffold00019 245222 1 C T - ReadM SNP 0004.scaffold00019 245238 1 T G - ReadM SNP 0004.scaffold00019 245298 1 G A - ReadM SNP 0004.scaffold00019 245307 1 A T - ReadM SNP 0004.scaffold00019 245329 1 C G - ReadM SNP 0004.scaffold00019 245372 1 T C - ReadM SNP 0004.scaffold00019 245413 1 C T - ReadM SNP 0004.scaffold00019 245450 1 C T - ReadM SNP 0004.scaffold00019 245579 1 A G - ReadM SNP 0004.scaffold00019 245586 1 G A - ReadM SNP 0004.scaffold00019 245601 1 C T - ReadM SNP 0004.scaffold00019 245732 1 T C - ReadM SNP 0004.scaffold00019 245748 1 C T - ReadM SNP 0004.scaffold00019 245770 1 C T - ReadM SNP 0004.scaffold00019 245816 1 T A - ReadM SNP 0004.scaffold00019 245830 1 C T - ReadM SNP 0004.scaffold00019 245954 1 A G - ReadM SNP 0004.scaffold00019 245973 1 C T - ReadM SNP 0004.scaffold00019 245991 1 C T - ReadM SNP 0004.scaffold00019 246076 1 G T - Both SNP 0004.scaffold00019 246228 1 T G scaffold18257 ReadM SNP 0004.scaffold00019 246399 1 T C - ReadM INDEL 0004.scaffold00019 246400 1 . T - ReadM SNP 0004.scaffold00019 246512 1 G T - ReadM SNP 0004.scaffold00019 246588 1 T A - ReadM SNP 0004.scaffold00019 246783 1 C T - ReadM SNP 0004.scaffold00019 246826 1 G T - ReadM SNP 0004.scaffold00019 246898 1 C T - ReadM SNP 0004.scaffold00019 246984 1 C A - ReadM SNP 0004.scaffold00019 247003 1 T C - ReadM SNP 0004.scaffold00019 247071 1 C T - ReadM SNP 0004.scaffold00019 247147 1 G A - ReadM SNP 0004.scaffold00019 247207 1 T C - ReadM SNP 0004.scaffold00019 247210 1 A C - ReadM INDEL 0004.scaffold00019 247264 1 T . - ReadM SNP 0004.scaffold00019 247288 1 A G - ReadM SNP 0004.scaffold00019 247390 1 T C - ReadM SNP 0004.scaffold00019 247496 1 A G - ReadM SNP 0004.scaffold00019 247500 1 G C - ReadM SNP 0004.scaffold00019 247520 1 G C - ReadM SNP 0004.scaffold00019 247544 1 A G - ReadM SNP 0004.scaffold00019 247666 1 A G - ReadM SNP 0004.scaffold00019 247669 1 T G - ReadM SNP 0004.scaffold00019 247899 1 T C - ReadM SNP 0004.scaffold00019 248001 1 T C - ReadM SNP 0004.scaffold00019 248010 1 G A - ReadM SNP 0004.scaffold00019 248142 1 C T - ReadM SNP 0004.scaffold00019 248214 1 C A - Both SNP 0004.scaffold00019 248292 1 A G scaffold18257 Both SNP 0004.scaffold00019 248324 1 T C scaffold18257 Both SNP 0004.scaffold00019 248332 1 T G scaffold18257 ScafM SNP 0004.scaffold00019 248353 1 T G scaffold18257 ReadM SNP 0004.scaffold00019 248369 1 G A - ReadM SNP 0004.scaffold00019 248388 1 G C - ReadM SNP 0004.scaffold00019 248438 1 G T - ReadM SNP 0004.scaffold00019 248692 1 A G - Both SNP 0004.scaffold00019 248722 1 C A scaffold18257 Both SNP 0004.scaffold00019 248741 1 T C scaffold18257 ScafM SNP 0004.scaffold00019 248762 1 C T scaffold18257 ReadM SNP 0004.scaffold00019 248881 1 T C - ReadM SNP 0004.scaffold00019 248947 1 T C - ScafM SNP 0004.scaffold00019 249178 1 A T scaffold18257 Both SNP 0004.scaffold00019 249183 1 T A scaffold18257 Both SNP 0004.scaffold00019 249216 1 C G scaffold18257 ScafM SNP 0004.scaffold00019 249273 1 A T scaffold18257 Both SNP 0004.scaffold00019 249303 1 C T scaffold18257 Both SNP 0004.scaffold00019 249341 1 A G scaffold18257 Both SNP 0004.scaffold00019 249353 1 T G scaffold18257 ScafM INDEL 0004.scaffold00019 249408 4 TCGA .... scaffold18257 ScafM SNP 0004.scaffold00019 249416 1 T G scaffold18257 Both SNP 0004.scaffold00019 249451 1 A G scaffold18257 Both SNP 0004.scaffold00019 249508 1 A T scaffold18257 ReadM SNP 0004.scaffold00019 249722 1 A C - ReadM SNP 0004.scaffold00019 249749 1 T C - ReadM SNP 0004.scaffold00019 249779 1 T C - ScafM SNP 0004.scaffold00019 249897 1 C A scaffold18257 Both SNP 0004.scaffold00019 249928 1 T C scaffold18257 ReadM SNP 0004.scaffold00019 250163 1 A G - ReadM SNP 0004.scaffold00019 250286 1 G T - ReadM SNP 0004.scaffold00019 250291 1 T G - ReadM SNP 0004.scaffold00019 250314 1 C T - ReadM SNP 0004.scaffold00019 250369 1 G A - ReadM SNP 0004.scaffold00019 250411 1 A T - ReadM SNP 0004.scaffold00019 250437 1 T C - ReadM SNP 0004.scaffold00019 250456 1 A G - ReadM SNP 0004.scaffold00019 250469 1 T C - ReadM SNP 0004.scaffold00019 250505 1 G T - ReadM SNP 0004.scaffold00019 250602 1 C T - ReadM SNP 0004.scaffold00019 250668 1 G A - ReadM SNP 0004.scaffold00019 250674 1 A C - ReadM SNP 0004.scaffold00019 250728 1 G A - ReadM SNP 0004.scaffold00019 250760 1 G T - ReadM SNP 0004.scaffold00019 250882 1 C A - ReadM SNP 0004.scaffold00019 250891 1 G A - ReadM SNP 0004.scaffold00019 250929 1 G A - ReadM SNP 0004.scaffold00019 250947 1 C T - ReadM SNP 0004.scaffold00019 250998 1 C T - ReadM SNP 0004.scaffold00019 251073 1 A G - ReadM SNP 0004.scaffold00019 251091 1 T A - ReadM SNP 0004.scaffold00019 251143 1 G C - ReadM INDEL 0004.scaffold00019 251237 1 T . - ReadM SNP 0004.scaffold00019 251302 1 A G - ReadM SNP 0004.scaffold00019 251328 1 A G - ReadM SNP 0004.scaffold00019 251452 1 T C - ReadM SNP 0004.scaffold00019 251666 1 G C - ReadM SNP 0004.scaffold00019 251678 1 G A - ReadM SNP 0004.scaffold00019 251695 1 G A - ReadM SNP 0004.scaffold00019 251758 1 T C - ReadM SNP 0004.scaffold00019 251774 1 T C - ReadM SNP 0004.scaffold00019 251823 1 G A - ReadM SNP 0004.scaffold00019 251827 1 G T - ReadM SNP 0004.scaffold00019 251876 1 C T - ReadM SNP 0004.scaffold00019 251935 1 A T - ReadM SNP 0004.scaffold00019 251952 1 C G - ReadM SNP 0004.scaffold00019 251954 1 A G - ReadM SNP 0004.scaffold00019 251993 1 A G - ReadM SNP 0004.scaffold00019 252049 1 A G - ReadM SNP 0004.scaffold00019 252167 1 C G - ReadM SNP 0004.scaffold00019 252180 1 T C - ReadM SNP 0004.scaffold00019 252228 1 A T - ReadM SNP 0004.scaffold00019 252304 1 A G - ReadM SNP 0004.scaffold00019 252314 1 T C - ReadM SNP 0004.scaffold00019 252333 1 G A - Both SNP 0004.scaffold00019 252426 1 G T scaffold18257 Both SNP 0004.scaffold00019 252478 1 C G scaffold18257 Both SNP 0004.scaffold00019 252513 1 G A scaffold18257 Both SNP 0004.scaffold00019 252554 1 C A scaffold18257 ScafM SNP 0004.scaffold00019 252569 4 CTAT AACC scaffold18257 ScafM SNP 0004.scaffold00019 252596 1 A G scaffold18257 Both INDEL 0004.scaffold00019 252597 1 . A scaffold18257 ReadM SNP 0004.scaffold00019 252638 1 G A - ReadM SNP 0004.scaffold00019 252690 1 T A - ReadM SNP 0004.scaffold00019 252906 1 T C - ReadM SNP 0004.scaffold00019 252918 1 G T - ReadM SNP 0004.scaffold00019 252973 1 A C - ReadM SNP 0004.scaffold00019 253034 1 C T - ReadM INDEL 0004.scaffold00019 253097 2 TT .. - ReadM SNP 0004.scaffold00019 253154 1 T C - ReadM SNP 0004.scaffold00019 253439 1 T A - ReadM SNP 0004.scaffold00019 253503 1 A C - ScafM SNP 0004.scaffold00019 253801 1 T A scaffold18257 ScafM SNP 0004.scaffold00019 253822 1 A T scaffold18257 ScafM SNP 0004.scaffold00019 253841 1 A C scaffold18257 ScafM SNP 0004.scaffold00019 253880 1 C T scaffold18257 ScafM SNP 0004.scaffold00019 253882 1 A T scaffold18257 ScafM SNP 0004.scaffold00019 253918 1 A G scaffold18257 ScafM SNP 0004.scaffold00019 254004 1 G A scaffold18257 ScafM SNP 0004.scaffold00019 254118 1 A G scaffold18257 ScafM INDEL 0004.scaffold00019 254122 3 ... CCC scaffold18257 ScafM SNP 0004.scaffold00019 254128 1 G A scaffold18257 ScafM SNP 0004.scaffold00019 254224 1 G A scaffold18257 ScafM SNP 0004.scaffold00019 254256 1 C G scaffold18257 Both SNP 0004.scaffold00019 254275 1 T G scaffold18257 Both SNP 0004.scaffold00019 254316 1 A T scaffold18257 Both SNP 0004.scaffold00019 254462 1 T C scaffold18257 Both SNP 0004.scaffold00019 254470 1 T A scaffold18257 ScafM SNP 0004.scaffold00019 254549 1 A C scaffold18257 Both SNP 0004.scaffold00019 254606 1 G C scaffold18257 Both SNP 0004.scaffold00019 254662 1 A C scaffold18257 Both SNP 0004.scaffold00019 254958 1 A G scaffold18257 Both SNP 0004.scaffold00019 254987 1 T A scaffold18257 Both SNP 0004.scaffold00019 254990 1 C A scaffold18257 ReadM SNP 0004.scaffold00019 255106 1 G A - ReadM SNP 0004.scaffold00019 255120 1 T C - ReadM SNP 0004.scaffold00019 255208 1 T G - ReadM SNP 0004.scaffold00019 255234 1 C T - ReadM SNP 0004.scaffold00019 255341 1 T C - ReadM SNP 0004.scaffold00019 255418 1 C T - ReadM SNP 0004.scaffold00019 255506 1 G T - ReadM SNP 0004.scaffold00019 255512 1 C T - ReadM INDEL 0004.scaffold00019 255582 3 ... TTT - ReadM SNP 0004.scaffold00019 255626 1 A G - ReadM SNP 0004.scaffold00019 255667 1 T C - ReadM SNP 0004.scaffold00019 255708 1 C T - ReadM SNP 0004.scaffold00019 255806 1 A G - ReadM SNP 0004.scaffold00019 255927 1 C A - ReadM SNP 0004.scaffold00019 256023 1 G A - ReadM SNP 0004.scaffold00019 256042 1 A G - ReadM SNP 0004.scaffold00019 256190 1 C T - Both SNP 0004.scaffold00019 256334 1 C A scaffold18257 ScafM SNP 0004.scaffold00019 256373 2 CC AT scaffold18257 ScafM SNP 0004.scaffold00019 256399 2 CA AG scaffold18257 Both SNP 0004.scaffold00019 256485 1 C T scaffold18257 Both SNP 0004.scaffold00019 256487 1 A G scaffold18257 ReadM SNP 0004.scaffold00019 256769 1 C T - ScafM SNP 0004.scaffold00019 257841 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 257998 2 AA CC scaffold2802 ReadM SNP 0004.scaffold00019 258008 1 C T - ScafM SNP 0004.scaffold00019 258052 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 258143 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 258156 1 G C scaffold2802 ScafM SNP 0004.scaffold00019 258192 1 A C scaffold2802 ScafM SNP 0004.scaffold00019 258235 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 259475 1 T C scaffold1651 ScafM INDEL 0004.scaffold00019 259502 2 .. AA scaffold1651 ScafM INDEL 0004.scaffold00019 259503 2 .. TA scaffold1651 ScafM SNP 0004.scaffold00019 259667 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 259682 1 C A scaffold2802 ScafM SNP 0004.scaffold00019 259684 1 T A scaffold2802 ScafM SNP 0004.scaffold00019 259702 1 A T scaffold2802 ScafM INDEL 0004.scaffold00019 259764 1 . A scaffold2802 ScafM SNP 0004.scaffold00019 260067 1 C G scaffold2802 Both SNP 0004.scaffold00019 260114 1 G A scaffold2802 Both SNP 0004.scaffold00019 260184 1 C T scaffold2802 ReadM SNP 0004.scaffold00019 260422 1 T A - ReadM SNP 0004.scaffold00019 260519 1 T A - ReadM SNP 0004.scaffold00019 260561 1 G A - ReadM SNP 0004.scaffold00019 260601 1 T A - ReadM INDEL 0004.scaffold00019 260685 1 . A - ReadM SNP 0004.scaffold00019 260778 1 C T - ReadM SNP 0004.scaffold00019 260832 1 G C - ReadM SNP 0004.scaffold00019 260860 1 T A - ReadM SNP 0004.scaffold00019 260915 1 C A - ReadM SNP 0004.scaffold00019 260950 1 T A - ReadM SNP 0004.scaffold00019 261121 1 C T - ReadM SNP 0004.scaffold00019 261129 1 G A - ReadM SNP 0004.scaffold00019 261143 1 C A - ReadM SNP 0004.scaffold00019 261157 1 C T - ReadM SNP 0004.scaffold00019 261178 1 T C - ReadM SNP 0004.scaffold00019 261378 1 A G - ReadM SNP 0004.scaffold00019 261389 1 G C - ReadM SNP 0004.scaffold00019 261699 1 G A - ReadM SNP 0004.scaffold00019 261701 1 C T - ReadM SNP 0004.scaffold00019 261901 1 T C - ReadM SNP 0004.scaffold00019 262026 1 T G - ScafM SNP 0004.scaffold00019 262138 1 G A scaffold2802 ReadM SNP 0004.scaffold00019 262155 1 G A - ReadM SNP 0004.scaffold00019 262166 1 A G - Both SNP 0004.scaffold00019 262217 1 A C scaffold2802 ScafM SNP 0004.scaffold00019 262341 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 262361 1 C G scaffold2802 ScafM SNP 0004.scaffold00019 262366 2 AT GA scaffold2802 Both SNP 0004.scaffold00019 262454 1 G C scaffold2802 Both SNP 0004.scaffold00019 262494 1 A G scaffold2802 Both SNP 0004.scaffold00019 262551 1 C G scaffold2802 Both SNP 0004.scaffold00019 262661 1 T G scaffold2802 ScafM INDEL 0004.scaffold00019 262700 8 GCCATATA ........ scaffold2802 ScafM INDEL 0004.scaffold00019 262731 28 ............................ CTTTGAATTTTATGGAATGGGCTTCCCT scaffold2802 ScafM SNP 0004.scaffold00019 262817 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 262836 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 262846 1 A G scaffold2802 ReadM SNP 0004.scaffold00019 264420 1 C A - ReadM SNP 0004.scaffold00019 264528 1 G T - ReadM SNP 0004.scaffold00019 264543 1 A C - ReadM SNP 0004.scaffold00019 264559 1 T A - ScafM SNP 0004.scaffold00019 264575 1 A T scaffold2802 Both INDEL 0004.scaffold00019 264617 1 . A scaffold2802 ScafM SNP 0004.scaffold00019 264619 1 A G scaffold2802 Both SNP 0004.scaffold00019 264645 1 A T scaffold2802 ReadM SNP 0004.scaffold00019 264713 1 G T - ReadM SNP 0004.scaffold00019 264731 1 C G - ReadM SNP 0004.scaffold00019 264788 1 A C - ReadM SNP 0004.scaffold00019 264902 1 C T - ReadM SNP 0004.scaffold00019 265057 1 C T - ReadM INDEL 0004.scaffold00019 265078 1 . C - ReadM SNP 0004.scaffold00019 265261 1 C T - ReadM SNP 0004.scaffold00019 265328 1 C T - ReadM INDEL 0004.scaffold00019 265401 1 G . - ReadM SNP 0004.scaffold00019 265513 1 T C - ReadM SNP 0004.scaffold00019 265519 1 A G - ReadM SNP 0004.scaffold00019 265540 1 A G - ReadM SNP 0004.scaffold00019 265600 1 A C - ReadM INDEL 0004.scaffold00019 265700 1 G . - ReadM SNP 0004.scaffold00019 265742 1 C T - ReadM SNP 0004.scaffold00019 265803 1 G C - ReadM SNP 0004.scaffold00019 265830 1 T C - ReadM SNP 0004.scaffold00019 265956 1 A T - ReadM SNP 0004.scaffold00019 266021 1 G A - ReadM SNP 0004.scaffold00019 266060 1 T A - ReadM SNP 0004.scaffold00019 266082 1 G T - ReadM SNP 0004.scaffold00019 266157 1 G A - ReadM SNP 0004.scaffold00019 266219 1 T C - ReadM SNP 0004.scaffold00019 266302 1 A T - ReadM SNP 0004.scaffold00019 266310 1 A G - ReadM SNP 0004.scaffold00019 266404 1 A G - ReadM SNP 0004.scaffold00019 266432 1 G A - ReadM SNP 0004.scaffold00019 266475 1 A G - ReadM SNP 0004.scaffold00019 266528 1 T A - ReadM SNP 0004.scaffold00019 266600 1 T C - ReadM SNP 0004.scaffold00019 266696 1 G T - ReadM SNP 0004.scaffold00019 266704 1 A G - ReadM SNP 0004.scaffold00019 266748 1 A C - ReadM SNP 0004.scaffold00019 266910 1 C T - ReadM SNP 0004.scaffold00019 266971 1 T C - ReadM SNP 0004.scaffold00019 266976 1 T C - ReadM SNP 0004.scaffold00019 267025 1 T C - ReadM SNP 0004.scaffold00019 267099 1 T C - ReadM SNP 0004.scaffold00019 267131 1 C T - ScafM SNP 0004.scaffold00019 273814 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 273900 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 273922 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 273930 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 273975 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 273989 1 G A scaffold2802 ScafM INDEL 0004.scaffold00019 274027 2 .. GG scaffold2802 ReadM SNP 0004.scaffold00019 274944 1 G A - ReadM SNP 0004.scaffold00019 275035 1 G A - Both SNP 0004.scaffold00019 275278 1 T G scaffold2802 Both SNP 0004.scaffold00019 275351 1 G T scaffold2802 Both SNP 0004.scaffold00019 275355 1 G C scaffold2802 Both SNP 0004.scaffold00019 275402 1 A G scaffold2802 Both SNP 0004.scaffold00019 275496 1 T G scaffold2802 Both SNP 0004.scaffold00019 275534 1 T A scaffold2802 ScafM SNP 0004.scaffold00019 275555 1 T C scaffold2802 Both SNP 0004.scaffold00019 275587 1 C A scaffold2802 Both SNP 0004.scaffold00019 275626 1 A G scaffold2802 Both SNP 0004.scaffold00019 275642 1 C T scaffold2802 Both SNP 0004.scaffold00019 275660 1 G A scaffold2802 Both SNP 0004.scaffold00019 275725 1 G A scaffold2802 Both SNP 0004.scaffold00019 275816 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 275847 2 GC AT scaffold2802 Both SNP 0004.scaffold00019 275960 1 T A scaffold2802 Both INDEL 0004.scaffold00019 275970 1 A . scaffold2802 Both SNP 0004.scaffold00019 276018 1 G A scaffold2802 Both SNP 0004.scaffold00019 276284 1 G A scaffold2802 Both SNP 0004.scaffold00019 276286 1 G C scaffold2802 Both SNP 0004.scaffold00019 276290 1 C A scaffold2802 ScafM SNP 0004.scaffold00019 276507 1 A T scaffold2802 ScafM INDEL 0004.scaffold00019 276541 2 AT .. scaffold2802 ScafM SNP 0004.scaffold00019 276555 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 276578 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 276589 1 T C scaffold2802 ScafM INDEL 0004.scaffold00019 276593 2 AT .G scaffold2802 Both SNP 0004.scaffold00019 276648 1 A G scaffold2802 ReadM SNP 0004.scaffold00019 276708 1 C T - ReadM SNP 0004.scaffold00019 276757 1 T C - ReadM SNP 0004.scaffold00019 276824 1 A C - ReadM SNP 0004.scaffold00019 276840 1 T C - ReadM SNP 0004.scaffold00019 276878 1 T C - ReadM SNP 0004.scaffold00019 276887 1 G A - ReadM SNP 0004.scaffold00019 276912 1 C A - ScafM INDEL 0004.scaffold00019 276963 1 . A scaffold2802 ScafM INDEL 0004.scaffold00019 276965 4 .... TAAT scaffold2802 ScafM INDEL 0004.scaffold00019 276968 1 C . scaffold2802 ScafM SNP 0004.scaffold00019 276971 2 AT CA scaffold2802 ScafM SNP 0004.scaffold00019 276974 1 G C scaffold2802 ScafM INDEL 0004.scaffold00019 276979 6 ...... CCAGGG scaffold2802 ScafM SNP 0004.scaffold00019 276981 2 CC TT scaffold2802 ScafM INDEL 0004.scaffold00019 276984 1 . A scaffold2802 ScafM SNP 0004.scaffold00019 276989 1 G C scaffold2802 ScafM INDEL 0004.scaffold00019 276990 7 ....... CATTTAC scaffold2802 ScafM INDEL 0004.scaffold00019 276992 2 .. TC scaffold2802 ScafM SNP 0004.scaffold00019 276998 1 A G scaffold2802 ReadM SNP 0004.scaffold00019 277519 1 G A - ScafM SNP 0004.scaffold00019 277626 1 A G scaffold2802 ScafM INDEL 0004.scaffold00019 277690 3 TAA ... scaffold2802 ReadM SNP 0004.scaffold00019 277878 1 C T - ReadM SNP 0004.scaffold00019 279200 1 A G - ReadM SNP 0004.scaffold00019 279208 1 A G - ScafM SNP 0004.scaffold00019 279360 1 A G scaffold2802 ScafM INDEL 0004.scaffold00019 279373 7 ....... TTACAAA scaffold2802 Both SNP 0004.scaffold00019 279548 1 A G scaffold2802 Both SNP 0004.scaffold00019 279598 1 T A scaffold2802 ReadM INDEL 0004.scaffold00019 279718 1 A . - Both SNP 0004.scaffold00019 279780 1 A T scaffold2802 Both INDEL 0004.scaffold00019 279786 1 . T scaffold2802 ReadM INDEL 0004.scaffold00019 279879 1 . T - ScafM INDEL 0004.scaffold00019 279879 2 .C TT scaffold2802 Both SNP 0004.scaffold00019 280050 1 C T scaffold2802 Both SNP 0004.scaffold00019 280060 1 T A scaffold2802 Both SNP 0004.scaffold00019 280092 1 A G scaffold2802 Both SNP 0004.scaffold00019 280124 1 A C scaffold2802 Both SNP 0004.scaffold00019 280174 1 A T scaffold2802 Both SNP 0004.scaffold00019 280229 1 G C scaffold2802 Both SNP 0004.scaffold00019 280359 1 G A scaffold2802 Both SNP 0004.scaffold00019 280367 1 T C scaffold2802 Both SNP 0004.scaffold00019 280473 1 C T scaffold2802 Both SNP 0004.scaffold00019 280605 1 T A scaffold2802 Both SNP 0004.scaffold00019 280658 1 A G scaffold2802 Both SNP 0004.scaffold00019 280724 1 T C scaffold2802 Both SNP 0004.scaffold00019 280799 1 G A scaffold2802 Both INDEL 0004.scaffold00019 280833 1 T . scaffold2802 Both SNP 0004.scaffold00019 281036 1 T G scaffold2802 Both SNP 0004.scaffold00019 281159 1 T G scaffold2802 Both SNP 0004.scaffold00019 281188 1 G C scaffold2802 Both SNP 0004.scaffold00019 281211 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 281250 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 281259 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 281264 1 G T scaffold2802 ScafM INDEL 0004.scaffold00019 281324 8 CCTTCATT ........ scaffold2802 Both SNP 0004.scaffold00019 281362 1 A C scaffold2802 Both SNP 0004.scaffold00019 281383 1 G A scaffold2802 Both SNP 0004.scaffold00019 281462 1 A G scaffold2802 Both SNP 0004.scaffold00019 281502 1 C T scaffold2802 Both SNP 0004.scaffold00019 281843 1 C G scaffold2802 ScafM SNP 0004.scaffold00019 281868 1 T G scaffold2802 ScafM INDEL 0004.scaffold00019 281873 3 TTT ... scaffold2802 ReadM SNP 0004.scaffold00019 281923 1 A G - ReadM SNP 0004.scaffold00019 281955 1 G A - ReadM SNP 0004.scaffold00019 281994 1 T C - ReadM SNP 0004.scaffold00019 282043 1 C A - ReadM SNP 0004.scaffold00019 282058 1 A T - ReadM SNP 0004.scaffold00019 282099 1 C T - ReadM SNP 0004.scaffold00019 282115 1 C T - ReadM SNP 0004.scaffold00019 282155 1 T A - ReadM SNP 0004.scaffold00019 282185 1 A G - ReadM INDEL 0004.scaffold00019 282220 1 A . - ReadM SNP 0004.scaffold00019 282371 1 T C - ReadM SNP 0004.scaffold00019 282411 1 C A - ReadM SNP 0004.scaffold00019 282417 1 T C - ReadM SNP 0004.scaffold00019 282453 1 A C - ScafM SNP 0004.scaffold00019 282738 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 282835 1 T A scaffold2802 ScafM INDEL 0004.scaffold00019 282845 5 CCCTT ..... scaffold2802 ScafM INDEL 0004.scaffold00019 282855 34 TAGCATATTGTGCATTATTAGGTAACACTTGTTC .................................. scaffold2802 ScafM INDEL 0004.scaffold00019 282891 4 ATTT .... scaffold2802 Both SNP 0004.scaffold00019 282915 1 C T scaffold2802 Both SNP 0004.scaffold00019 282945 1 C T scaffold2802 Both SNP 0004.scaffold00019 283035 1 A G scaffold2802 ReadM SNP 0004.scaffold00019 283345 1 T C - ReadM INDEL 0004.scaffold00019 283386 1 A . - ReadM SNP 0004.scaffold00019 283416 1 T C - Both SNP 0004.scaffold00019 283464 1 T G scaffold2802 Both SNP 0004.scaffold00019 283478 1 G A scaffold2802 Both SNP 0004.scaffold00019 283493 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 283548 1 T G scaffold2802 ReadM SNP 0004.scaffold00019 283719 1 C T - ReadM SNP 0004.scaffold00019 283740 1 C T - ReadM SNP 0004.scaffold00019 283767 1 T C - ReadM SNP 0004.scaffold00019 283808 1 C T - ReadM SNP 0004.scaffold00019 283886 1 C T - ReadM INDEL 0004.scaffold00019 283929 1 T . - ReadM SNP 0004.scaffold00019 283964 1 T A - ReadM SNP 0004.scaffold00019 284027 1 C A - ReadM SNP 0004.scaffold00019 284030 1 C T - ReadM SNP 0004.scaffold00019 284097 1 A T - ReadM SNP 0004.scaffold00019 284209 1 G A - ReadM SNP 0004.scaffold00019 284348 1 G A - ReadM SNP 0004.scaffold00019 284386 1 A T - ReadM SNP 0004.scaffold00019 284476 1 T C - ReadM SNP 0004.scaffold00019 284549 1 C A - ReadM SNP 0004.scaffold00019 284559 1 G A - ReadM INDEL 0004.scaffold00019 284607 1 . T - ReadM INDEL 0004.scaffold00019 284623 1 . G - ReadM SNP 0004.scaffold00019 284630 1 G A - ReadM SNP 0004.scaffold00019 285023 1 C T - ReadM SNP 0004.scaffold00019 285179 1 T C - ReadM SNP 0004.scaffold00019 285297 1 C G - ReadM SNP 0004.scaffold00019 285299 1 C A - ReadM SNP 0004.scaffold00019 285430 1 G C - ReadM SNP 0004.scaffold00019 285442 1 A G - ReadM SNP 0004.scaffold00019 285476 1 G A - ReadM SNP 0004.scaffold00019 285586 1 T G - ReadM SNP 0004.scaffold00019 285596 1 A G - ReadM SNP 0004.scaffold00019 285696 1 T C - ReadM SNP 0004.scaffold00019 285855 1 G A - ReadM SNP 0004.scaffold00019 285977 1 C T - ReadM SNP 0004.scaffold00019 285981 1 G T - ReadM SNP 0004.scaffold00019 286078 1 A G - ReadM SNP 0004.scaffold00019 286118 1 G T - ReadM SNP 0004.scaffold00019 286162 1 A G - ReadM SNP 0004.scaffold00019 286294 1 G A - ReadM SNP 0004.scaffold00019 286519 1 T A - ReadM INDEL 0004.scaffold00019 286521 1 T . - ReadM SNP 0004.scaffold00019 286705 1 C G - ReadM SNP 0004.scaffold00019 286714 1 C G - ReadM SNP 0004.scaffold00019 286735 1 G A - ReadM SNP 0004.scaffold00019 286750 1 T C - ReadM SNP 0004.scaffold00019 286777 1 C A - ReadM SNP 0004.scaffold00019 286835 1 G A - ReadM SNP 0004.scaffold00019 286847 1 G A - ReadM SNP 0004.scaffold00019 286860 1 G A - ReadM SNP 0004.scaffold00019 287001 1 A T - ReadM SNP 0004.scaffold00019 287355 1 C A - ReadM SNP 0004.scaffold00019 287408 1 T C - ReadM SNP 0004.scaffold00019 287413 1 T C - ReadM SNP 0004.scaffold00019 287449 1 C T - ReadM SNP 0004.scaffold00019 287500 1 A T - ReadM SNP 0004.scaffold00019 287530 2 AA GG - ReadM SNP 0004.scaffold00019 287593 1 A G - ReadM SNP 0004.scaffold00019 287731 1 T C - ReadM SNP 0004.scaffold00019 287766 1 A C - ReadM SNP 0004.scaffold00019 288023 1 A T - ReadM SNP 0004.scaffold00019 288040 1 C T - ReadM SNP 0004.scaffold00019 288120 1 T C - ReadM SNP 0004.scaffold00019 288290 1 G A - ReadM SNP 0004.scaffold00019 288328 1 G A - ReadM SNP 0004.scaffold00019 288395 1 G A - ReadM SNP 0004.scaffold00019 288502 1 C T - ReadM SNP 0004.scaffold00019 288579 1 A G - ReadM SNP 0004.scaffold00019 288624 1 T C - ReadM SNP 0004.scaffold00019 288655 1 A C - ReadM SNP 0004.scaffold00019 288782 1 T C - ReadM SNP 0004.scaffold00019 288897 1 A G - ReadM SNP 0004.scaffold00019 288941 1 T G - ReadM SNP 0004.scaffold00019 289119 1 G C - ReadM SNP 0004.scaffold00019 289155 1 G A - ReadM SNP 0004.scaffold00019 289201 1 C T - ReadM SNP 0004.scaffold00019 289215 1 T C - ReadM SNP 0004.scaffold00019 289256 1 A T - ReadM SNP 0004.scaffold00019 289374 1 A G - ReadM SNP 0004.scaffold00019 289391 1 C T - ReadM SNP 0004.scaffold00019 289433 1 T C - ReadM SNP 0004.scaffold00019 289443 1 A G - ReadM SNP 0004.scaffold00019 289599 1 T C - ReadM SNP 0004.scaffold00019 289620 1 T C - ReadM SNP 0004.scaffold00019 289624 1 C T - ReadM INDEL 0004.scaffold00019 289724 2 .. CA - ReadM SNP 0004.scaffold00019 289787 1 G C - ReadM SNP 0004.scaffold00019 289845 1 A C - ReadM SNP 0004.scaffold00019 289865 1 G A - ReadM SNP 0004.scaffold00019 289981 1 C T - ReadM SNP 0004.scaffold00019 290088 1 G A - ReadM SNP 0004.scaffold00019 290387 1 T C - ReadM SNP 0004.scaffold00019 290399 1 G A - ReadM SNP 0004.scaffold00019 290430 1 A C - ReadM SNP 0004.scaffold00019 290447 1 A C - ReadM SNP 0004.scaffold00019 290599 1 A T - ReadM SNP 0004.scaffold00019 290628 1 A T - ReadM SNP 0004.scaffold00019 290657 1 G A - ReadM SNP 0004.scaffold00019 290799 1 A T - ReadM SNP 0004.scaffold00019 290882 1 G A - ReadM SNP 0004.scaffold00019 290911 1 T C - ReadM SNP 0004.scaffold00019 290963 1 T C - ReadM SNP 0004.scaffold00019 291160 1 C T - ReadM SNP 0004.scaffold00019 291429 1 T C - ReadM SNP 0004.scaffold00019 291524 1 G C - ReadM SNP 0004.scaffold00019 291564 1 G C - ReadM SNP 0004.scaffold00019 291756 1 A G - ReadM SNP 0004.scaffold00019 291925 1 T G - ReadM SNP 0004.scaffold00019 291971 1 A G - ReadM SNP 0004.scaffold00019 292152 1 G A - ReadM SNP 0004.scaffold00019 292163 1 C G - ReadM SNP 0004.scaffold00019 292215 1 A T - ReadM INDEL 0004.scaffold00019 292263 1 . T - ReadM SNP 0004.scaffold00019 292368 1 T C - ReadM SNP 0004.scaffold00019 292375 1 T C - ReadM SNP 0004.scaffold00019 292390 1 C T - ReadM SNP 0004.scaffold00019 292435 1 T A - ReadM SNP 0004.scaffold00019 292452 1 C T - ReadM SNP 0004.scaffold00019 292479 1 C T - ReadM SNP 0004.scaffold00019 292526 1 A T - ReadM SNP 0004.scaffold00019 292584 1 C T - ReadM SNP 0004.scaffold00019 292597 1 A G - ReadM SNP 0004.scaffold00019 292638 1 T C - ReadM SNP 0004.scaffold00019 292677 1 G A - ReadM SNP 0004.scaffold00019 292750 1 G A - ReadM SNP 0004.scaffold00019 292795 1 T C - ReadM SNP 0004.scaffold00019 292806 1 A G - ReadM SNP 0004.scaffold00019 292851 1 C G - ReadM SNP 0004.scaffold00019 292909 1 T C - ReadM SNP 0004.scaffold00019 292914 1 G A - ReadM SNP 0004.scaffold00019 292952 1 T C - ReadM SNP 0004.scaffold00019 292977 1 G A - ReadM SNP 0004.scaffold00019 293217 1 T C - ReadM SNP 0004.scaffold00019 293269 1 T A - ReadM SNP 0004.scaffold00019 293306 1 T A - ReadM SNP 0004.scaffold00019 293373 2 GG TA - ReadM INDEL 0004.scaffold00019 293466 2 TC .. - ReadM SNP 0004.scaffold00019 293512 1 A T - ReadM SNP 0004.scaffold00019 293606 1 T A - ReadM SNP 0004.scaffold00019 293821 1 T C - ReadM SNP 0004.scaffold00019 293953 1 T C - ReadM SNP 0004.scaffold00019 294003 1 A G - ReadM SNP 0004.scaffold00019 294277 1 C T - ReadM SNP 0004.scaffold00019 294283 1 C G - ReadM SNP 0004.scaffold00019 294303 1 C T - ReadM SNP 0004.scaffold00019 294373 1 C G - ReadM SNP 0004.scaffold00019 294533 1 G A - ReadM SNP 0004.scaffold00019 294601 1 A C - ReadM SNP 0004.scaffold00019 294664 1 C T - ReadM SNP 0004.scaffold00019 294764 1 G A - Both SNP 0004.scaffold00019 294778 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 294843 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 294846 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 294887 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 294930 1 C T scaffold2802 ReadM SNP 0004.scaffold00019 295210 1 A G - Both SNP 0004.scaffold00019 295560 1 T A scaffold2802 ReadM SNP 0004.scaffold00019 295955 1 G A - ReadM SNP 0004.scaffold00019 295990 1 C T - ReadM SNP 0004.scaffold00019 296090 1 A G - ReadM SNP 0004.scaffold00019 296125 1 A G - ReadM SNP 0004.scaffold00019 296145 1 C A - ReadM SNP 0004.scaffold00019 296187 1 C T - ReadM SNP 0004.scaffold00019 296239 1 C A - ReadM SNP 0004.scaffold00019 296378 1 C G - ReadM INDEL 0004.scaffold00019 296495 1 T . - ReadM SNP 0004.scaffold00019 296608 1 T C - ReadM SNP 0004.scaffold00019 296610 1 A G - ReadM SNP 0004.scaffold00019 296625 1 T C - ReadM SNP 0004.scaffold00019 296937 1 A T - ReadM SNP 0004.scaffold00019 296981 1 G A - ReadM SNP 0004.scaffold00019 297002 1 G T - ReadM SNP 0004.scaffold00019 297062 1 T G - ReadM INDEL 0004.scaffold00019 297149 1 . G - ReadM SNP 0004.scaffold00019 297236 1 A G - ReadM SNP 0004.scaffold00019 297253 1 G T - ReadM SNP 0004.scaffold00019 297336 1 T G - ReadM SNP 0004.scaffold00019 297500 1 T G - ReadM SNP 0004.scaffold00019 298921 1 G A - ReadM SNP 0004.scaffold00019 299055 1 T C - ReadM SNP 0004.scaffold00019 299137 1 G A - ReadM SNP 0004.scaffold00019 299250 1 T G - ReadM SNP 0004.scaffold00019 299364 1 A G - ReadM SNP 0004.scaffold00019 299386 1 T G - ReadM SNP 0004.scaffold00019 299412 1 G T - ReadM SNP 0004.scaffold00019 299428 1 A G - ReadM SNP 0004.scaffold00019 299589 1 G T - ReadM SNP 0004.scaffold00019 299661 1 T A - ReadM SNP 0004.scaffold00019 299687 1 A C - ReadM SNP 0004.scaffold00019 299839 1 G A - ReadM SNP 0004.scaffold00019 299859 1 G T - ReadM SNP 0004.scaffold00019 300012 1 G C - ReadM SNP 0004.scaffold00019 300041 1 T C - ReadM SNP 0004.scaffold00019 300086 1 G A - ReadM SNP 0004.scaffold00019 300221 1 T G - ReadM SNP 0004.scaffold00019 300308 1 G A - ReadM SNP 0004.scaffold00019 300428 1 G T - ReadM SNP 0004.scaffold00019 300524 1 A T - ReadM SNP 0004.scaffold00019 300532 1 G A - ReadM SNP 0004.scaffold00019 300698 1 A G - ReadM SNP 0004.scaffold00019 300771 1 T C - ReadM INDEL 0004.scaffold00019 300861 1 T . - ReadM INDEL 0004.scaffold00019 300916 1 . A - ReadM SNP 0004.scaffold00019 301068 1 A G - Both SNP 0004.scaffold00019 301121 1 G A scaffold2802 Both SNP 0004.scaffold00019 301242 1 C T scaffold2802 Both SNP 0004.scaffold00019 301293 1 C G scaffold2802 Both SNP 0004.scaffold00019 301304 1 G T scaffold2802 ScafM SNP 0004.scaffold00019 301338 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 301357 1 C G scaffold2802 ScafM SNP 0004.scaffold00019 301368 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 301379 2 CA AC scaffold2802 ScafM SNP 0004.scaffold00019 301407 1 G T scaffold2802 ReadM SNP 0004.scaffold00019 302590 1 G T - ReadM SNP 0004.scaffold00019 302617 1 A G - ReadM SNP 0004.scaffold00019 302720 1 A T - ReadM SNP 0004.scaffold00019 302768 1 A G - ScafM SNP 0004.scaffold00019 302867 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 302869 1 A T scaffold2802 Both SNP 0004.scaffold00019 302882 1 A G scaffold2802 Both SNP 0004.scaffold00019 302917 1 C T scaffold2802 ReadM SNP 0004.scaffold00019 302975 1 C A - ReadM SNP 0004.scaffold00019 303035 1 C T - ReadM SNP 0004.scaffold00019 303201 1 A C - ReadM SNP 0004.scaffold00019 303412 1 C A - ReadM SNP 0004.scaffold00019 303634 1 G A - ReadM SNP 0004.scaffold00019 303740 1 T G - ReadM SNP 0004.scaffold00019 303813 1 C T - ReadM SNP 0004.scaffold00019 303953 1 G A - ReadM SNP 0004.scaffold00019 304001 1 C A - ReadM SNP 0004.scaffold00019 304023 1 A G - ReadM SNP 0004.scaffold00019 304233 1 A G - ReadM SNP 0004.scaffold00019 304242 1 A T - ReadM SNP 0004.scaffold00019 304386 1 T C - ReadM SNP 0004.scaffold00019 304408 1 C T - ReadM SNP 0004.scaffold00019 304414 1 T C - ReadM SNP 0004.scaffold00019 304439 1 T C - ReadM SNP 0004.scaffold00019 304473 1 G A - ReadM SNP 0004.scaffold00019 304510 1 T C - ReadM SNP 0004.scaffold00019 304612 1 G A - ReadM INDEL 0004.scaffold00019 304716 1 G . - ReadM SNP 0004.scaffold00019 304801 1 A G - ReadM SNP 0004.scaffold00019 304813 1 A T - ReadM SNP 0004.scaffold00019 305293 1 G A - ReadM INDEL 0004.scaffold00019 305457 1 . T - Both SNP 0004.scaffold00019 305533 1 C T scaffold2802 Both SNP 0004.scaffold00019 305536 1 T G scaffold2802 ScafM SNP 0004.scaffold00019 306125 2 GC AT scaffold2802 Both SNP 0004.scaffold00019 306211 1 T A scaffold2802 Both INDEL 0004.scaffold00019 306216 1 T . scaffold2802 ScafM SNP 0004.scaffold00019 306267 1 T A scaffold2802 ScafM SNP 0004.scaffold00019 306271 1 C A scaffold2802 Both SNP 0004.scaffold00019 306310 1 A T scaffold2802 ReadM SNP 0004.scaffold00019 306348 1 T C - ScafM INDEL 0004.scaffold00019 306422 1 A . scaffold2802 Both SNP 0004.scaffold00019 306484 1 C T scaffold2802 Both SNP 0004.scaffold00019 306512 1 T G scaffold2802 Both SNP 0004.scaffold00019 306523 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 306564 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 306569 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 306589 1 G A scaffold2802 Both SNP 0004.scaffold00019 306598 1 T C scaffold2802 Both SNP 0004.scaffold00019 306643 1 C A scaffold2802 Both SNP 0004.scaffold00019 306690 1 G T scaffold2802 Both SNP 0004.scaffold00019 306709 1 A C scaffold2802 ReadM SNP 0004.scaffold00019 306860 1 G A - ReadM SNP 0004.scaffold00019 306972 1 T G - ReadM SNP 0004.scaffold00019 307075 1 G A - ReadM SNP 0004.scaffold00019 307104 1 T A - Both SNP 0004.scaffold00019 307143 1 G T scaffold2802 Both SNP 0004.scaffold00019 307149 1 A G scaffold2802 Both SNP 0004.scaffold00019 307320 1 T C scaffold2802 Both SNP 0004.scaffold00019 307331 1 A G scaffold2802 ReadM INDEL 0004.scaffold00019 308383 1 . T - ReadM SNP 0004.scaffold00019 308533 1 G A - ReadM INDEL 0004.scaffold00019 308569 1 . A - ReadM SNP 0004.scaffold00019 308608 1 A T - ReadM SNP 0004.scaffold00019 308726 1 A T - ReadM SNP 0004.scaffold00019 308886 1 T G - ReadM INDEL 0004.scaffold00019 308987 1 . T - ReadM SNP 0004.scaffold00019 309029 1 T A - ReadM SNP 0004.scaffold00019 309078 1 T C - ReadM SNP 0004.scaffold00019 309270 1 C T - ReadM SNP 0004.scaffold00019 309278 1 C T - ReadM SNP 0004.scaffold00019 309308 1 G A - Both SNP 0004.scaffold00019 309571 1 C A scaffold2802 Both SNP 0004.scaffold00019 309620 1 T C scaffold2802 ReadM SNP 0004.scaffold00019 309739 1 A C - ReadM SNP 0004.scaffold00019 309744 1 T C - ReadM SNP 0004.scaffold00019 309801 1 G A - ReadM SNP 0004.scaffold00019 309911 1 G A - ReadM SNP 0004.scaffold00019 309978 1 G A - ReadM SNP 0004.scaffold00019 310112 1 G A - ReadM SNP 0004.scaffold00019 310171 1 A T - ReadM SNP 0004.scaffold00019 310417 1 C A - ReadM SNP 0004.scaffold00019 310431 1 G A - ReadM SNP 0004.scaffold00019 310480 1 C T - ReadM SNP 0004.scaffold00019 310613 1 G C - ReadM SNP 0004.scaffold00019 310670 1 C T - ReadM SNP 0004.scaffold00019 310852 1 T C - ReadM SNP 0004.scaffold00019 310887 1 T A - ReadM SNP 0004.scaffold00019 310906 1 C G - Both SNP 0004.scaffold00019 310963 1 C T scaffold2802 ReadM SNP 0004.scaffold00019 311080 1 A G - ReadM SNP 0004.scaffold00019 311091 1 A G - ReadM SNP 0004.scaffold00019 311150 1 A G - ReadM SNP 0004.scaffold00019 311335 1 A G - ReadM SNP 0004.scaffold00019 311379 1 C T - ReadM SNP 0004.scaffold00019 311655 1 G C - ReadM SNP 0004.scaffold00019 311664 1 C T - ReadM SNP 0004.scaffold00019 311748 1 T C - ReadM SNP 0004.scaffold00019 311823 1 G A - ReadM SNP 0004.scaffold00019 311901 1 G A - ReadM SNP 0004.scaffold00019 311944 1 G T - ReadM SNP 0004.scaffold00019 312007 1 C G - ReadM SNP 0004.scaffold00019 312117 1 T C - ReadM SNP 0004.scaffold00019 312204 1 G T - ReadM SNP 0004.scaffold00019 312236 1 C A - ReadM SNP 0004.scaffold00019 312252 1 G T - ReadM SNP 0004.scaffold00019 312349 1 G T - ReadM SNP 0004.scaffold00019 312382 1 G A - ReadM SNP 0004.scaffold00019 312566 1 G T - ReadM SNP 0004.scaffold00019 312655 1 G A - Both SNP 0004.scaffold00019 312745 1 T A scaffold2802 Both SNP 0004.scaffold00019 312904 1 T G scaffold2802 Both SNP 0004.scaffold00019 312946 1 T C scaffold2802 ReadM SNP 0004.scaffold00019 313029 1 A G - ScafM SNP 0004.scaffold00019 313635 1 T A scaffold6953 ScafM SNP 0004.scaffold00019 313660 1 T C scaffold6953 ScafM SNP 0004.scaffold00019 313736 1 G A scaffold6953 ScafM SNP 0004.scaffold00019 313813 1 C T scaffold6953 ScafM SNP 0004.scaffold00019 313819 1 G A scaffold6953 ScafM SNP 0004.scaffold00019 313938 1 A G scaffold6953 ScafM SNP 0004.scaffold00019 313993 1 T C scaffold6953 ScafM SNP 0004.scaffold00019 314004 2 GC TA scaffold6953 ScafM SNP 0004.scaffold00019 314007 1 A T scaffold6953 ScafM SNP 0004.scaffold00019 314015 1 T C scaffold6953 ScafM SNP 0004.scaffold00019 314081 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 314125 1 C T scaffold2802 ScafM INDEL 0004.scaffold00019 314218 1 A . scaffold2802 ScafM SNP 0004.scaffold00019 314323 1 A T scaffold2802 ScafM SNP 0004.scaffold00019 315434 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 315453 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 315474 1 T C scaffold2802 ReadM SNP 0004.scaffold00019 315873 1 A T - ReadM INDEL 0004.scaffold00019 315899 1 . T - ReadM INDEL 0004.scaffold00019 316011 2 TT .. - ReadM SNP 0004.scaffold00019 316037 1 T C - ReadM SNP 0004.scaffold00019 316082 1 C T - ReadM SNP 0004.scaffold00019 316427 1 C A - ReadM SNP 0004.scaffold00019 316447 1 A G - ReadM SNP 0004.scaffold00019 316471 1 C T - Both SNP 0004.scaffold00019 316530 1 T C scaffold2802 ReadM SNP 0004.scaffold00019 316559 1 G T - ReadM SNP 0004.scaffold00019 316657 1 G A - ReadM SNP 0004.scaffold00019 316677 1 G A - Both SNP 0004.scaffold00019 316882 1 C T scaffold2802 ScafM INDEL 0004.scaffold00019 316965 1 . A scaffold2802 ScafM SNP 0004.scaffold00019 317005 1 T A scaffold2802 ScafM INDEL 0004.scaffold00019 317109 24 TTGTTATTGTTATTGTTATTGTTA ........................ scaffold2802 ScafM SNP 0004.scaffold00019 317140 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 317181 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 318071 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 318124 1 T A scaffold2802 ScafM SNP 0004.scaffold00019 318138 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 318315 1 G C scaffold2802 ScafM INDEL 0004.scaffold00019 318372 2 TG .. scaffold2802 ScafM SNP 0004.scaffold00019 318393 1 G C scaffold2802 ReadM SNP 0004.scaffold00019 322423 1 A G - ReadM SNP 0004.scaffold00019 322465 1 T C - ScafM SNP 0004.scaffold00019 322745 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 322751 1 A G scaffold2802 ScafM SNP 0004.scaffold00019 322770 1 A T scaffold2802 Both SNP 0004.scaffold00019 322780 1 G T scaffold2802 Both SNP 0004.scaffold00019 322875 1 A G scaffold2802 Both SNP 0004.scaffold00019 322958 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 323008 2 AT CG scaffold2802 Both SNP 0004.scaffold00019 323051 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 323396 1 A C scaffold2802 ScafM SNP 0004.scaffold00019 324851 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 324863 1 G A scaffold2802 ScafM INDEL 0004.scaffold00019 324869 1 . A scaffold2802 Both SNP 0004.scaffold00019 326123 1 G A scaffold2802 ScafM SNP 0004.scaffold00019 326319 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 326338 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 326405 1 T C scaffold2802 ScafM SNP 0004.scaffold00019 326442 1 T A scaffold2802 ScafM SNP 0004.scaffold00019 326464 1 A C scaffold2802 ScafM INDEL 0004.scaffold00019 326639 1 T . scaffold2802 ScafM SNP 0004.scaffold00019 326646 1 C G scaffold2802 ScafM SNP 0004.scaffold00019 326658 1 C T scaffold2802 ScafM SNP 0004.scaffold00019 326714 1 A C scaffold2802 ReadM SNP 0004.scaffold00019 330599 1 A G - ReadM SNP 0004.scaffold00019 330856 1 T C - ReadM SNP 0004.scaffold00019 330892 1 A T - ReadM SNP 0004.scaffold00019 330928 1 C T - ReadM SNP 0004.scaffold00019 331081 1 A C - ReadM SNP 0004.scaffold00019 331723 1 T C - ReadM SNP 0004.scaffold00019 331804 1 T G - ReadM SNP 0004.scaffold00019 331878 1 A T - ReadM SNP 0004.scaffold00019 332195 1 G T - ReadM SNP 0004.scaffold00019 332394 1 G T - ReadM SNP 0004.scaffold00019 332418 1 A T - ReadM SNP 0004.scaffold00019 332447 1 A C - ReadM SNP 0004.scaffold00019 332596 1 T C - ReadM SNP 0004.scaffold00019 332869 1 C A - ReadM SNP 0004.scaffold00019 332958 1 A C - ReadM SNP 0004.scaffold00019 333164 1 C T - ReadM SNP 0004.scaffold00019 333208 1 C T - ReadM SNP 0004.scaffold00019 333341 1 G T - ReadM SNP 0004.scaffold00019 333430 1 T C - ReadM SNP 0004.scaffold00019 333452 1 G A - ReadM SNP 0004.scaffold00019 333712 1 C G - ReadM SNP 0004.scaffold00019 333793 1 A T - ReadM INDEL 0004.scaffold00019 333810 1 T . - ReadM SNP 0004.scaffold00019 333841 1 T G - ReadM SNP 0004.scaffold00019 333908 1 T C - ReadM SNP 0004.scaffold00019 334078 1 T A - ReadM SNP 0004.scaffold00019 334224 1 T A - ReadM SNP 0004.scaffold00019 334334 1 A G - ReadM SNP 0004.scaffold00019 334579 1 C T - ReadM SNP 0004.scaffold00019 334681 1 C T - ScafM SNP 0004.scaffold00019 334801 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 334808 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 334813 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 334815 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 334822 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 334856 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 334880 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 334894 1 T G scaffold11555 Both SNP 0004.scaffold00019 334942 1 G A scaffold11555 Both INDEL 0004.scaffold00019 335030 1 . A scaffold11555 Both SNP 0004.scaffold00019 335082 1 G T scaffold11555 Both SNP 0004.scaffold00019 335101 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 335139 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 335147 1 A T scaffold11555 Both SNP 0004.scaffold00019 335152 1 C A scaffold11555 Both SNP 0004.scaffold00019 335220 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 335257 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 335259 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 335261 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 335283 1 G T scaffold11555 Both SNP 0004.scaffold00019 335299 1 G A scaffold11555 Both SNP 0004.scaffold00019 335316 1 C T scaffold11555 ReadM SNP 0004.scaffold00019 335422 1 A T - ReadM SNP 0004.scaffold00019 335436 1 C T - ReadM SNP 0004.scaffold00019 335442 1 G A - ScafM SNP 0004.scaffold00019 335471 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 335476 2 .. TT scaffold11555 ScafM INDEL 0004.scaffold00019 335477 1 . A scaffold11555 ScafM SNP 0004.scaffold00019 336006 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 336028 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 336076 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 337423 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 337474 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 337479 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 337530 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 337612 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 337635 1 C A scaffold11555 Both SNP 0004.scaffold00019 337686 1 G C scaffold11555 ScafM INDEL 0004.scaffold00019 337798 2 .A CT scaffold11555 ScafM SNP 0004.scaffold00019 337803 1 G T scaffold11555 Both SNP 0004.scaffold00019 337853 1 A G scaffold11555 Both SNP 0004.scaffold00019 337858 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 337910 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 337934 2 AA GG scaffold11555 ScafM SNP 0004.scaffold00019 337937 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 337952 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 337960 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 338019 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 338081 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 338095 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 338124 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 338162 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 338202 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 338206 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 338651 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 338732 1 A G scaffold11555 ReadM SNP 0004.scaffold00019 339020 1 A G - ReadM SNP 0004.scaffold00019 339083 1 G C - ReadM SNP 0004.scaffold00019 339236 1 C T - ReadM SNP 0004.scaffold00019 339243 1 C T - ReadM SNP 0004.scaffold00019 339268 1 A G - ReadM SNP 0004.scaffold00019 339305 1 A G - ReadM SNP 0004.scaffold00019 339307 1 A G - ReadM SNP 0004.scaffold00019 339384 1 C G - ReadM SNP 0004.scaffold00019 339420 1 T C - Both SNP 0004.scaffold00019 339599 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 339692 23 TGACGTATATTATCTAATTTCAA ....................... scaffold11555 ScafM SNP 0004.scaffold00019 339743 2 AC GT scaffold11555 ScafM SNP 0004.scaffold00019 339755 1 A T scaffold11555 Both SNP 0004.scaffold00019 339765 1 C T scaffold11555 Both SNP 0004.scaffold00019 339779 1 G A scaffold11555 Both SNP 0004.scaffold00019 339842 1 C T scaffold11555 Both SNP 0004.scaffold00019 339955 1 A G scaffold11555 Both SNP 0004.scaffold00019 339975 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 340165 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 340194 1 A G scaffold11555 Both SNP 0004.scaffold00019 340244 1 T C scaffold11555 Both SNP 0004.scaffold00019 340248 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 340323 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 340325 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 340345 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 340350 1 C T scaffold11555 Both SNP 0004.scaffold00019 340396 1 C G scaffold11555 Both SNP 0004.scaffold00019 340404 1 G C scaffold11555 Both SNP 0004.scaffold00019 340534 1 A G scaffold11555 Both SNP 0004.scaffold00019 340574 1 C T scaffold11555 Both SNP 0004.scaffold00019 340611 1 C T scaffold11555 Both INDEL 0004.scaffold00019 340675 1 T . scaffold11555 Both SNP 0004.scaffold00019 340701 1 G A scaffold11555 Both SNP 0004.scaffold00019 340762 1 G T scaffold11555 Both SNP 0004.scaffold00019 340821 1 T C scaffold11555 Both SNP 0004.scaffold00019 340918 1 G A scaffold11555 Both SNP 0004.scaffold00019 340930 1 G A scaffold11555 Both SNP 0004.scaffold00019 340979 1 T G scaffold11555 Both SNP 0004.scaffold00019 340982 1 G A scaffold11555 Both SNP 0004.scaffold00019 341030 1 T A scaffold11555 Both SNP 0004.scaffold00019 341055 1 A G scaffold11555 Both SNP 0004.scaffold00019 341059 1 A T scaffold11555 Both SNP 0004.scaffold00019 341165 1 T C scaffold11555 Both SNP 0004.scaffold00019 341186 1 A C scaffold11555 Both INDEL 0004.scaffold00019 341412 3 ACG ... scaffold11555 ReadM SNP 0004.scaffold00019 341507 1 A G - ReadM SNP 0004.scaffold00019 341518 1 T G - ReadM INDEL 0004.scaffold00019 341540 1 . T - Both SNP 0004.scaffold00019 341605 1 C A scaffold11555 Both SNP 0004.scaffold00019 341607 1 A T scaffold11555 ReadM SNP 0004.scaffold00019 341839 1 G T - ReadM SNP 0004.scaffold00019 341940 1 G A - ReadM SNP 0004.scaffold00019 341943 1 G A - ReadM SNP 0004.scaffold00019 341956 1 T C - ReadM SNP 0004.scaffold00019 342152 1 G T - ReadM SNP 0004.scaffold00019 342178 1 G A - Both SNP 0004.scaffold00019 342324 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 342623 1 T G scaffold11555 ScafM INDEL 0004.scaffold00019 342672 3 TAA ... scaffold11555 ScafM SNP 0004.scaffold00019 342736 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 342746 10 GGTACTTCAC .......... scaffold11555 ReadM INDEL 0004.scaffold00019 342811 1 T . - ReadM SNP 0004.scaffold00019 342947 1 G C - ReadM SNP 0004.scaffold00019 342956 1 C G - ReadM SNP 0004.scaffold00019 342966 1 A G - ReadM SNP 0004.scaffold00019 343007 1 C T - ReadM SNP 0004.scaffold00019 343056 1 T C - ReadM SNP 0004.scaffold00019 343102 1 G T - ReadM SNP 0004.scaffold00019 343203 1 A G - ReadM SNP 0004.scaffold00019 343296 1 C T - ReadM SNP 0004.scaffold00019 343309 1 T C - ReadM SNP 0004.scaffold00019 343383 1 G T - ReadM SNP 0004.scaffold00019 343421 1 T C - ReadM SNP 0004.scaffold00019 343472 1 C T - ScafM SNP 0004.scaffold00019 343743 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 343765 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 344389 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 344449 1 A C scaffold11555 Both SNP 0004.scaffold00019 344556 1 G T scaffold11555 Both SNP 0004.scaffold00019 344642 1 G A scaffold11555 Both SNP 0004.scaffold00019 344662 1 A C scaffold11555 Both SNP 0004.scaffold00019 344670 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 344853 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 344855 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 344874 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 344878 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 344940 1 A T scaffold11555 ReadM SNP 0004.scaffold00019 345158 1 A C - Both SNP 0004.scaffold00019 345210 2 AG CT scaffold11555 Both SNP 0004.scaffold00019 345310 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 345628 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 345654 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 345659 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 345676 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 345703 1 T G scaffold11555 ScafM INDEL 0004.scaffold00019 345716 2 TT .A scaffold11555 ScafM SNP 0004.scaffold00019 345989 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 346093 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 346109 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 346111 1 A G scaffold11555 ReadM SNP 0004.scaffold00019 346166 1 G T - ScafM SNP 0004.scaffold00019 346187 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 346210 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 346257 1 T A scaffold11555 Both SNP 0004.scaffold00019 346294 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 346302 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 346316 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 346345 1 T G - ReadM SNP 0004.scaffold00019 346379 1 A G - ReadM INDEL 0004.scaffold00019 346474 1 G . - ReadM SNP 0004.scaffold00019 346499 1 T C - Both SNP 0004.scaffold00019 346606 1 A G scaffold11555 Both SNP 0004.scaffold00019 346669 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 346680 1 G A scaffold11555 Both SNP 0004.scaffold00019 346877 1 T G scaffold11555 Both SNP 0004.scaffold00019 347094 1 C T scaffold11555 Both SNP 0004.scaffold00019 347206 1 C T scaffold11555 Both INDEL 0004.scaffold00019 347220 1 . C scaffold11555 Both INDEL 0004.scaffold00019 347233 1 . T scaffold11555 Both SNP 0004.scaffold00019 347349 1 C T scaffold11555 Both SNP 0004.scaffold00019 347356 1 A T scaffold11555 Both SNP 0004.scaffold00019 347399 1 T A scaffold11555 Both SNP 0004.scaffold00019 347470 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 347475 2 GA CT scaffold11555 ScafM SNP 0004.scaffold00019 347685 1 C G scaffold11555 ScafM INDEL 0004.scaffold00019 347689 2 .. AT scaffold11555 Both SNP 0004.scaffold00019 347726 1 G A scaffold11555 Both SNP 0004.scaffold00019 347768 1 G C scaffold11555 Both SNP 0004.scaffold00019 347844 1 T C scaffold11555 Both SNP 0004.scaffold00019 347865 1 A G scaffold11555 Both SNP 0004.scaffold00019 347916 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 347944 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 347946 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 347953 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 347995 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 348020 2 TA CT scaffold11555 ScafM SNP 0004.scaffold00019 348029 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 348044 1 A T scaffold11555 Both SNP 0004.scaffold00019 348115 1 C T scaffold11555 Both SNP 0004.scaffold00019 348118 1 A G scaffold11555 Both SNP 0004.scaffold00019 348127 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 348340 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 348346 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 348351 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 348380 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 348383 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 348443 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 348448 2 GG AA scaffold11555 ScafM SNP 0004.scaffold00019 348463 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 348470 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 348498 2 AG GT scaffold11555 ScafM SNP 0004.scaffold00019 348533 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 348545 1 T C scaffold11555 ReadM INDEL 0004.scaffold00019 348588 1 . G - ReadM SNP 0004.scaffold00019 348605 1 A G - Both SNP 0004.scaffold00019 348681 1 G A scaffold11555 Both INDEL 0004.scaffold00019 348718 2 .. TT scaffold11555 ScafM INDEL 0004.scaffold00019 348880 2 CT .. scaffold11555 Both SNP 0004.scaffold00019 348925 1 T C scaffold11555 Both SNP 0004.scaffold00019 348948 1 T A scaffold11555 Both SNP 0004.scaffold00019 348954 1 A G scaffold11555 Both INDEL 0004.scaffold00019 349040 1 . G scaffold11555 Both SNP 0004.scaffold00019 349117 1 T C scaffold11555 Both SNP 0004.scaffold00019 349335 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 349394 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 349439 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 349548 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 349563 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 349619 2 AC CT scaffold11555 ScafM SNP 0004.scaffold00019 349635 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 349653 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 349690 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 349697 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 349705 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 349714 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 349718 2 GA TG scaffold11555 ScafM SNP 0004.scaffold00019 349721 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 349749 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 349773 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 349789 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 350829 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 350880 1 T G scaffold11555 ScafM INDEL 0004.scaffold00019 350906 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 350932 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 350949 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 350953 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 350959 3 CGT ... scaffold11555 ScafM SNP 0004.scaffold00019 350968 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 350996 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351038 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 351052 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 351057 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 351345 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351354 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 351358 1 A G scaffold11555 Both SNP 0004.scaffold00019 351373 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 351427 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 351470 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351483 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 351499 1 T G scaffold11555 Both SNP 0004.scaffold00019 351585 1 T C scaffold11555 Both SNP 0004.scaffold00019 351671 1 G T scaffold11555 Both SNP 0004.scaffold00019 351717 1 G C scaffold11555 ScafM INDEL 0004.scaffold00019 351752 5 ..... ATAAC scaffold11555 ScafM INDEL 0004.scaffold00019 351755 1 . C scaffold11555 ScafM INDEL 0004.scaffold00019 351756 1 . A scaffold11555 ScafM INDEL 0004.scaffold00019 351758 3 ... ACT scaffold11555 ScafM SNP 0004.scaffold00019 351776 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 351801 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351813 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 351831 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351847 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 351866 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 351870 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 351909 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 351923 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 351934 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 351938 1 T C scaffold11555 ReadM SNP 0004.scaffold00019 352040 1 T C - ReadM SNP 0004.scaffold00019 352050 2 CC GT - ReadM SNP 0004.scaffold00019 352106 1 T C - ReadM SNP 0004.scaffold00019 352120 1 T A - ReadM SNP 0004.scaffold00019 352137 1 G T - ReadM SNP 0004.scaffold00019 352173 1 G T - ReadM SNP 0004.scaffold00019 352230 1 A G - ReadM SNP 0004.scaffold00019 352236 1 T A - ReadM SNP 0004.scaffold00019 352370 1 T G - ReadM SNP 0004.scaffold00019 352446 1 C A - ReadM SNP 0004.scaffold00019 352464 1 A G - ScafM SNP 0004.scaffold00019 367580 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367602 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 367607 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 367609 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 367613 2 CT TG scaffold11555 ScafM SNP 0004.scaffold00019 367621 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 367627 2 TA CG scaffold11555 ScafM SNP 0004.scaffold00019 367631 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367639 3 AAC GGT scaffold11555 ScafM SNP 0004.scaffold00019 367645 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367648 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367654 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367658 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 367661 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 367665 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 367668 1 . A scaffold11555 ScafM INDEL 0004.scaffold00019 367697 1 C . scaffold11555 ScafM SNP 0004.scaffold00019 367701 1 G T scaffold11555 ScafM INDEL 0004.scaffold00019 367709 5 ..... AGAGA scaffold11555 ScafM INDEL 0004.scaffold00019 367740 2 GG .T scaffold11555 ScafM SNP 0004.scaffold00019 367744 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 367752 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 367763 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 367774 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 367776 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 367779 1 T A scaffold11555 ReadM SNP 0004.scaffold00019 369596 1 T C - ReadM SNP 0004.scaffold00019 369668 1 C T - ScafM SNP 0004.scaffold00019 370331 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 370340 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 370352 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 370376 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 370385 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 370389 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 370397 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 370410 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 370418 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 370443 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 374819 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 374842 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 374887 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 374899 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 374933 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 374938 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 374961 1 . A scaffold11555 ScafM SNP 0004.scaffold00019 374990 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 374996 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 375009 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 375033 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 375058 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 375071 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 375088 29 ............................. TCATTGTGGATTTAGGGTTGAGTATTATA scaffold11555 ScafM INDEL 0004.scaffold00019 375103 1 G . scaffold11555 ScafM SNP 0004.scaffold00019 375108 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 375118 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 375126 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 375148 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 375188 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 375190 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 375202 2 AA GT scaffold11555 ScafM SNP 0004.scaffold00019 375205 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 375207 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 377860 1 T G - ScafM SNP 0004.scaffold00019 382040 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 382053 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 382066 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 382083 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 382087 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 382098 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 382112 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 382136 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 382172 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 382183 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 382188 11 CATCACTACAT ........... scaffold11555 ScafM SNP 0004.scaffold00019 382212 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 382242 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 382247 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 382255 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 382259 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 382291 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 382298 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 382315 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 382366 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 382369 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 382381 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 382383 2 TA CC scaffold11555 ScafM SNP 0004.scaffold00019 382391 2 GG AC scaffold11555 ScafM SNP 0004.scaffold00019 382398 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 382406 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 382422 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 382443 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 382464 2 .T GA scaffold11555 ScafM SNP 0004.scaffold00019 382467 2 AT GG scaffold11555 ScafM SNP 0004.scaffold00019 382475 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 382480 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 382497 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 382499 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 382511 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 382525 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 382546 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 382590 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 382593 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 382596 1 . A scaffold11555 ScafM INDEL 0004.scaffold00019 382600 2 .. CG scaffold11555 ScafM INDEL 0004.scaffold00019 382603 1 . T scaffold11555 ScafM INDEL 0004.scaffold00019 382604 2 .. AT scaffold11555 ScafM SNP 0004.scaffold00019 382608 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 382617 1 . T scaffold11555 ScafM INDEL 0004.scaffold00019 383024 3 TGG ... scaffold11555 ScafM SNP 0004.scaffold00019 383029 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 383041 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 383050 1 C A scaffold11555 ScafM INDEL 0004.scaffold00019 383055 4 TTTC .... scaffold11555 ScafM SNP 0004.scaffold00019 383081 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 383091 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 383096 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 383100 1 C G scaffold11555 ReadM SNP 0004.scaffold00019 383449 1 C T - ReadM SNP 0004.scaffold00019 383522 1 G C - ReadM SNP 0004.scaffold00019 383954 1 C T - ReadM SNP 0004.scaffold00019 383980 1 T G - ScafM SNP 0004.scaffold00019 386064 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 386082 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 386116 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 386124 1 A G scaffold11555 ReadM SNP 0004.scaffold00019 386493 1 A T - ScafM SNP 0004.scaffold00019 386632 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 386639 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 386645 4 TAAT .... scaffold11555 ScafM INDEL 0004.scaffold00019 386691 8 GACTGTTA ........ scaffold11555 ScafM SNP 0004.scaffold00019 386719 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 386796 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 386824 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 386856 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 386863 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 386896 1 A G scaffold11555 Both SNP 0004.scaffold00019 387019 1 T C scaffold11555 Both SNP 0004.scaffold00019 387098 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 387130 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 387189 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 387209 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 387217 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 387229 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 387250 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 387267 1 C G scaffold11555 ScafM INDEL 0004.scaffold00019 387291 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 387294 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387300 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 387329 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 387332 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 387342 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 387361 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387363 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 387384 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 387393 22 ...................... ACGCTTAATAATTTTTGTCCAT scaffold11555 ScafM SNP 0004.scaffold00019 387409 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 387415 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387421 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 387428 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 387441 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 387458 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387511 1 C A scaffold11555 ScafM INDEL 0004.scaffold00019 387540 8 ........ CTTAATGG scaffold11555 ScafM SNP 0004.scaffold00019 387555 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 387568 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 387593 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 387605 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 387611 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387622 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 387641 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387650 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387666 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 387671 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 387772 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387788 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387827 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 387841 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 387846 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387858 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 387924 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 387954 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 387958 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 387960 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 387964 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 387970 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 387987 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388000 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388023 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388025 2 GT AC scaffold11555 ScafM SNP 0004.scaffold00019 388040 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 388061 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 388069 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388085 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388103 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 388110 2 TC CT scaffold11555 ScafM SNP 0004.scaffold00019 388126 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 388138 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 388156 2 AA .. scaffold11555 ScafM SNP 0004.scaffold00019 388170 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 388174 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 388178 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 388184 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 388192 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 388210 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 388212 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 388233 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 388242 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 388244 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 388255 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388258 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 388264 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 388271 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 388296 1 C A scaffold11555 ScafM INDEL 0004.scaffold00019 388355 6 .....G AATATT scaffold11555 ScafM SNP 0004.scaffold00019 388389 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 388398 7 TTTTCCG ....... scaffold11555 ScafM INDEL 0004.scaffold00019 388412 6 TTCTTC ...... scaffold11555 ScafM SNP 0004.scaffold00019 388423 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388426 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 388435 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 388438 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388457 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 388467 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 388474 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 388485 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388504 1 G T scaffold11555 ScafM INDEL 0004.scaffold00019 388506 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 388516 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388775 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 388788 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388790 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 388797 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 388814 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388816 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388904 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388907 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 388917 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 388929 2 TG CA scaffold11555 ScafM SNP 0004.scaffold00019 388949 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388956 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 388958 2 GG CA scaffold11555 ScafM SNP 0004.scaffold00019 388963 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 388983 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 388999 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 389004 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 389023 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 389227 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 389229 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 389232 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 389255 2 GC TA scaffold11555 ScafM INDEL 0004.scaffold00019 389260 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 389283 1 T A scaffold11555 ReadM SNP 0004.scaffold00019 389393 1 G T - ReadM INDEL 0004.scaffold00019 389402 1 G . - ReadM SNP 0004.scaffold00019 389443 1 T A - ScafM INDEL 0004.scaffold00019 389492 1 . T scaffold11555 ScafM INDEL 0004.scaffold00019 389494 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 389506 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 389525 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 389530 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 389538 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 389557 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 389559 2 GT TC scaffold11555 ScafM SNP 0004.scaffold00019 389566 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 389573 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 389593 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 389604 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 389614 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 389629 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 389678 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 389705 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 389717 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 389773 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 389809 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 389817 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 389826 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 389882 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 389897 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 390458 1 A G scaffold8099 ScafM INDEL 0004.scaffold00019 390464 3 CCG ... scaffold8099 ScafM SNP 0004.scaffold00019 390479 1 A G scaffold8099 ScafM SNP 0004.scaffold00019 390486 1 G A scaffold8099 ScafM SNP 0004.scaffold00019 390534 1 G A scaffold8099 ScafM SNP 0004.scaffold00019 390549 1 A C scaffold8099 ScafM SNP 0004.scaffold00019 390551 1 T A scaffold8099 ScafM SNP 0004.scaffold00019 390581 1 T C scaffold8099 ScafM SNP 0004.scaffold00019 390587 1 T G scaffold8099 ScafM SNP 0004.scaffold00019 390593 1 G T scaffold8099 ScafM SNP 0004.scaffold00019 390603 1 C T scaffold8099 ScafM SNP 0004.scaffold00019 390607 1 G A scaffold8099 ScafM SNP 0004.scaffold00019 390624 1 A G scaffold8099 ScafM SNP 0004.scaffold00019 392151 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 392162 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 392171 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 392175 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 392184 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 392195 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 392208 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 392239 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 392249 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 392285 2 AT GA scaffold11555 ScafM SNP 0004.scaffold00019 392299 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 392325 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 392335 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 392972 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 392977 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 392984 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 393014 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 393019 2 AT CA scaffold11555 ScafM SNP 0004.scaffold00019 393023 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 393027 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 393038 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 393068 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 393071 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 393083 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 393104 1 C G scaffold11555 ScafM INDEL 0004.scaffold00019 393154 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 393209 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 393223 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 393232 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 393236 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 393275 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 393278 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 393282 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 394276 1 A T scaffold5471 ScafM SNP 0004.scaffold00019 394383 1 C G scaffold5471 ScafM SNP 0004.scaffold00019 394408 1 T C scaffold5471 ScafM INDEL 0004.scaffold00019 394420 1 T . scaffold5471 ScafM SNP 0004.scaffold00019 394426 1 A T scaffold5471 ScafM SNP 0004.scaffold00019 394433 2 GG CA scaffold5471 ScafM SNP 0004.scaffold00019 398419 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398421 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 398427 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 398429 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 398432 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 398434 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 398452 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398454 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 398463 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398470 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 398472 3 TAA ATG scaffold8003 ScafM SNP 0004.scaffold00019 398481 7 GGGTAAT AAAAGGA scaffold8003 ScafM SNP 0004.scaffold00019 398504 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398511 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398513 2 AG GC scaffold8003 ScafM SNP 0004.scaffold00019 398517 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398521 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398538 2 TG CA scaffold8003 ScafM SNP 0004.scaffold00019 398545 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398547 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398552 3 TCT GGG scaffold8003 ScafM SNP 0004.scaffold00019 398562 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 398564 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 398566 1 . A scaffold8003 ScafM INDEL 0004.scaffold00019 398576 8 GTGCCAAG ........ scaffold8003 ScafM INDEL 0004.scaffold00019 398590 3 GTC ... scaffold8003 ScafM SNP 0004.scaffold00019 398595 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398597 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 398607 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 398613 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 398616 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398623 1 G A scaffold8003 ScafM INDEL 0004.scaffold00019 398627 1 C . scaffold8003 ScafM SNP 0004.scaffold00019 398629 2 AT TG scaffold8003 ScafM SNP 0004.scaffold00019 398634 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398649 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398669 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398671 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 398683 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 398689 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 398692 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398694 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 398696 1 T A scaffold8003 ScafM INDEL 0004.scaffold00019 398699 2 .A GC scaffold8003 ScafM SNP 0004.scaffold00019 398702 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 398717 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398719 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 398742 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398780 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 398792 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 398795 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 398797 2 AC GT scaffold8003 ScafM SNP 0004.scaffold00019 398842 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 398845 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398848 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 398851 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398854 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 398872 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 398880 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 398889 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 398898 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 398902 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 398906 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 398913 1 T C scaffold8003 ScafM INDEL 0004.scaffold00019 398915 1 . G scaffold8003 ScafM INDEL 0004.scaffold00019 398919 1 C . scaffold8003 ScafM INDEL 0004.scaffold00019 398923 4 ATGT .... scaffold8003 ScafM SNP 0004.scaffold00019 398931 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 398937 2 CC AA scaffold8003 ScafM SNP 0004.scaffold00019 398948 2 TT CG scaffold8003 ScafM SNP 0004.scaffold00019 398952 2 AT TG scaffold8003 ScafM SNP 0004.scaffold00019 398955 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 398959 2 AT CC scaffold8003 ScafM SNP 0004.scaffold00019 398971 1 C T scaffold8003 ScafM INDEL 0004.scaffold00019 398989 1 . T scaffold8003 ScafM SNP 0004.scaffold00019 398992 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399005 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399013 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399034 2 CA AC scaffold8003 ScafM SNP 0004.scaffold00019 399040 2 TT CG scaffold8003 ScafM SNP 0004.scaffold00019 399053 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399058 2 TG CA scaffold8003 ScafM SNP 0004.scaffold00019 399063 2 CA TT scaffold8003 ScafM SNP 0004.scaffold00019 399080 2 TA CG scaffold8003 ScafM SNP 0004.scaffold00019 399085 2 TC CG scaffold8003 ScafM SNP 0004.scaffold00019 399095 3 AGG GAA scaffold8003 ScafM SNP 0004.scaffold00019 399099 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 399103 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399108 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399123 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399129 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 399131 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399137 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 399140 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 399146 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399151 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399154 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 399157 3 ... TCA scaffold8003 ScafM INDEL 0004.scaffold00019 399158 2 .. TG scaffold8003 ScafM INDEL 0004.scaffold00019 399161 2 .. TT scaffold8003 ScafM INDEL 0004.scaffold00019 399163 3 ... TTT scaffold8003 ScafM SNP 0004.scaffold00019 399165 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399180 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399186 1 G T scaffold8003 ScafM INDEL 0004.scaffold00019 399192 6 AAAACA .....G scaffold8003 ScafM SNP 0004.scaffold00019 399205 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 399208 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399216 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399224 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399226 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399233 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399257 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 399275 1 T C scaffold8003 ScafM INDEL 0004.scaffold00019 399280 2 CA .. scaffold8003 ScafM INDEL 0004.scaffold00019 399288 1 . T scaffold8003 ScafM SNP 0004.scaffold00019 399294 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399307 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 399310 1 C T scaffold8003 ScafM INDEL 0004.scaffold00019 399315 1 . G scaffold8003 ScafM SNP 0004.scaffold00019 399324 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399332 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 399334 3 GAC ... scaffold8003 ScafM SNP 0004.scaffold00019 399340 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 399360 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399362 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399379 2 AG GA scaffold8003 ScafM SNP 0004.scaffold00019 399387 2 GC AT scaffold8003 ScafM SNP 0004.scaffold00019 399402 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399417 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399426 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399439 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399445 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 399451 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 399455 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399469 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399492 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 399496 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 399498 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399500 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399519 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 399531 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399533 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 399540 1 G A scaffold8003 ScafM INDEL 0004.scaffold00019 399542 1 . T scaffold8003 ScafM SNP 0004.scaffold00019 399545 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 399548 1 C A scaffold8003 ScafM INDEL 0004.scaffold00019 399554 1 . G scaffold8003 ScafM INDEL 0004.scaffold00019 399555 1 . C scaffold8003 ScafM SNP 0004.scaffold00019 399560 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399568 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 399576 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399579 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 399591 1 A T scaffold8003 ScafM INDEL 0004.scaffold00019 399593 3 .TT GAA scaffold8003 ScafM INDEL 0004.scaffold00019 399617 1 . G scaffold8003 ScafM SNP 0004.scaffold00019 399620 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 399866 3 AAA TGG scaffold8003 ScafM SNP 0004.scaffold00019 399871 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 399875 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399886 2 AA TT scaffold8003 ScafM INDEL 0004.scaffold00019 399890 1 T . scaffold8003 ScafM SNP 0004.scaffold00019 399895 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 399921 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399927 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 399929 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 399933 2 AA GG scaffold8003 ScafM SNP 0004.scaffold00019 399958 2 CA TG scaffold8003 ScafM INDEL 0004.scaffold00019 399971 3 AAT ... scaffold8003 ScafM INDEL 0004.scaffold00019 399981 4 ACAT .... scaffold8003 ScafM SNP 0004.scaffold00019 399990 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399993 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 399999 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400002 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400009 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400022 1 G A scaffold8003 ScafM INDEL 0004.scaffold00019 400028 1 . C scaffold8003 ScafM SNP 0004.scaffold00019 400039 2 TA CC scaffold8003 ScafM SNP 0004.scaffold00019 400049 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400053 2 GC AG scaffold8003 ScafM SNP 0004.scaffold00019 400058 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400064 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400069 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400073 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400076 1 C A scaffold8003 ScafM INDEL 0004.scaffold00019 400078 1 . G scaffold8003 ScafM INDEL 0004.scaffold00019 400082 1 T . scaffold8003 ScafM SNP 0004.scaffold00019 400095 1 A T scaffold8003 ScafM INDEL 0004.scaffold00019 400096 9 ......... TGATATGGT scaffold8003 ScafM SNP 0004.scaffold00019 400097 1 C G scaffold8003 ScafM INDEL 0004.scaffold00019 400101 3 ... TAC scaffold8003 ScafM INDEL 0004.scaffold00019 400103 1 . A scaffold8003 ScafM INDEL 0004.scaffold00019 400107 1 . T scaffold8003 ScafM INDEL 0004.scaffold00019 400108 3 ... TTC scaffold8003 ScafM INDEL 0004.scaffold00019 400110 1 . T scaffold8003 ScafM INDEL 0004.scaffold00019 400112 20 .................... TCTGGAGTGAAAGTATTATC scaffold8003 ScafM INDEL 0004.scaffold00019 400115 2 .. CC scaffold8003 ScafM INDEL 0004.scaffold00019 400116 3 ... GCT scaffold8003 ScafM INDEL 0004.scaffold00019 400120 1 . A scaffold8003 ScafM SNP 0004.scaffold00019 400130 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400151 2 TG CA scaffold8003 ScafM SNP 0004.scaffold00019 400156 4 TTTC GCAA scaffold8003 ScafM INDEL 0004.scaffold00019 400162 4 GTAG .... scaffold8003 ScafM SNP 0004.scaffold00019 400168 2 GA AT scaffold8003 ScafM INDEL 0004.scaffold00019 400171 2 GG .. scaffold8003 ScafM SNP 0004.scaffold00019 400176 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400179 6 CGGTAC AAAATT scaffold8003 ScafM SNP 0004.scaffold00019 400186 3 AGC TTT scaffold8003 ScafM SNP 0004.scaffold00019 400193 2 AT CG scaffold8003 ScafM INDEL 0004.scaffold00019 400196 2 CT .A scaffold8003 ScafM SNP 0004.scaffold00019 400200 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400202 1 G C scaffold8003 ScafM INDEL 0004.scaffold00019 400203 1 . A scaffold8003 ScafM SNP 0004.scaffold00019 400207 2 AC GG scaffold8003 ScafM SNP 0004.scaffold00019 400223 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400229 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 400241 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400249 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400253 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 400255 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 400259 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400264 2 CA TT scaffold8003 ScafM SNP 0004.scaffold00019 400272 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400307 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400312 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400317 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 400332 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400337 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400349 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400353 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400384 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400386 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400392 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400395 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400404 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 400414 2 GT AC scaffold8003 ScafM SNP 0004.scaffold00019 400417 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400419 2 CT AG scaffold8003 ScafM SNP 0004.scaffold00019 400435 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400442 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400453 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400465 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400475 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400488 1 T G scaffold8003 ScafM INDEL 0004.scaffold00019 400494 3 ... TCT scaffold8003 ScafM SNP 0004.scaffold00019 400495 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400502 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400504 1 G T scaffold8003 ScafM INDEL 0004.scaffold00019 400507 2 .. AG scaffold8003 ScafM SNP 0004.scaffold00019 400508 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 400510 2 TT AA scaffold8003 ScafM SNP 0004.scaffold00019 400520 1 A T scaffold8003 ScafM INDEL 0004.scaffold00019 400530 4 .... TATA scaffold8003 ScafM SNP 0004.scaffold00019 400539 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400541 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400543 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 400548 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400553 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400577 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 400579 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400585 4 ACGT TTAA scaffold8003 ScafM SNP 0004.scaffold00019 400599 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400606 2 AT TG scaffold8003 ScafM SNP 0004.scaffold00019 400616 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 400618 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400620 2 CA TG scaffold8003 ScafM SNP 0004.scaffold00019 400631 2 TT CC scaffold8003 ScafM SNP 0004.scaffold00019 400637 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400652 1 G A scaffold8003 ScafM INDEL 0004.scaffold00019 400658 1 T . scaffold8003 ScafM INDEL 0004.scaffold00019 400661 1 . G scaffold8003 ScafM SNP 0004.scaffold00019 400667 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400682 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400686 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400690 2 GC AT scaffold8003 ScafM SNP 0004.scaffold00019 400696 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400701 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 400705 4 ATAT .... scaffold8003 ScafM SNP 0004.scaffold00019 400734 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400739 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400742 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400751 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400754 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400760 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400768 1 G C scaffold8003 ScafM SNP 0004.scaffold00019 400770 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400784 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400795 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 400803 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400820 1 T G scaffold8003 ScafM SNP 0004.scaffold00019 400823 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400827 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400837 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400846 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400861 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 400864 1 C G scaffold8003 ScafM SNP 0004.scaffold00019 400866 1 T A scaffold8003 ScafM SNP 0004.scaffold00019 400869 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 400873 2 TT .G scaffold8003 ScafM SNP 0004.scaffold00019 400884 2 AC TT scaffold8003 ScafM SNP 0004.scaffold00019 400890 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 400894 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 400905 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400922 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400932 2 AA TC scaffold8003 ScafM SNP 0004.scaffold00019 400935 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 400959 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 400961 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 400969 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 400986 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 400988 1 A G scaffold8003 ScafM INDEL 0004.scaffold00019 401001 1 . A scaffold8003 ScafM SNP 0004.scaffold00019 401051 1 G T scaffold8003 ScafM SNP 0004.scaffold00019 401053 1 A T scaffold8003 ScafM INDEL 0004.scaffold00019 401054 1 . C scaffold8003 ScafM INDEL 0004.scaffold00019 401055 1 . T scaffold8003 ScafM INDEL 0004.scaffold00019 401056 1 . T scaffold8003 ScafM SNP 0004.scaffold00019 401080 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 401083 1 C T scaffold8003 ScafM SNP 0004.scaffold00019 401085 2 AC CG scaffold8003 ScafM SNP 0004.scaffold00019 401089 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 401092 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 401095 1 G A scaffold8003 ScafM SNP 0004.scaffold00019 401100 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 401115 1 C A scaffold8003 ScafM SNP 0004.scaffold00019 401119 2 GA AG scaffold8003 ScafM SNP 0004.scaffold00019 401122 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 401126 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 401128 1 T C scaffold8003 ScafM SNP 0004.scaffold00019 401148 1 A G scaffold8003 ScafM SNP 0004.scaffold00019 401156 1 C T scaffold8003 ScafM INDEL 0004.scaffold00019 401160 1 A . scaffold8003 ScafM SNP 0004.scaffold00019 401166 1 A C scaffold8003 ScafM SNP 0004.scaffold00019 401171 2 TT CG scaffold8003 ScafM SNP 0004.scaffold00019 401181 1 A C scaffold8003 ScafM INDEL 0004.scaffold00019 401186 3 TTT ... scaffold8003 ScafM INDEL 0004.scaffold00019 401190 1 T . scaffold8003 ScafM INDEL 0004.scaffold00019 401192 2 GA .T scaffold8003 ScafM SNP 0004.scaffold00019 401206 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 401223 1 A T scaffold8003 ScafM SNP 0004.scaffold00019 410272 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 410287 8 ........ TTCCAACT scaffold11555 ScafM SNP 0004.scaffold00019 410313 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 410322 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 410327 1 . G scaffold11555 ScafM SNP 0004.scaffold00019 410384 1 C G scaffold11555 ScafM INDEL 0004.scaffold00019 410403 13 ............. AGATGGATGAAGT scaffold11555 ScafM SNP 0004.scaffold00019 410420 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 410478 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 410498 1 . A scaffold11555 ScafM SNP 0004.scaffold00019 410504 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 410519 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 410526 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 410566 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 410571 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 410583 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 410590 2 TG CA scaffold11555 ScafM SNP 0004.scaffold00019 410625 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 410638 1 A G scaffold11555 Both SNP 0004.scaffold00019 410674 1 A G scaffold11555 Both SNP 0004.scaffold00019 410690 1 G T scaffold11555 Both SNP 0004.scaffold00019 410716 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 410757 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 410765 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 410771 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 410782 1 T C scaffold11555 ReadM SNP 0004.scaffold00019 410839 1 G A - ReadM SNP 0004.scaffold00019 410899 1 A G - ReadM SNP 0004.scaffold00019 411005 1 A G - ReadM SNP 0004.scaffold00019 411185 1 C T - ReadM SNP 0004.scaffold00019 411251 1 C T - ReadM SNP 0004.scaffold00019 411282 1 C A - ReadM SNP 0004.scaffold00019 411332 1 A G - ReadM SNP 0004.scaffold00019 411419 1 C A - ReadM SNP 0004.scaffold00019 411704 1 C T - ReadM SNP 0004.scaffold00019 411736 1 A G - ReadM SNP 0004.scaffold00019 411768 1 T G - ReadM SNP 0004.scaffold00019 411895 1 G T - Both SNP 0004.scaffold00019 412042 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 412481 1 A C - ReadM SNP 0004.scaffold00019 412487 1 C G - ReadM SNP 0004.scaffold00019 412506 1 C G - ReadM SNP 0004.scaffold00019 412579 1 A G - ReadM SNP 0004.scaffold00019 412630 1 G A - ReadM SNP 0004.scaffold00019 412639 1 T A - ScafM SNP 0004.scaffold00019 412755 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 412760 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 412770 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 412775 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 412806 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 412832 1 . G scaffold11555 ScafM SNP 0004.scaffold00019 412837 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 414337 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 414341 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 414364 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 414386 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 414401 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 414408 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414422 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414433 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 414448 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 414465 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 414665 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 414667 2 CG AA scaffold11555 ScafM SNP 0004.scaffold00019 414718 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 414725 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414749 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414773 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414787 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 414793 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 414800 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 414812 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 414825 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 414830 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 414837 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 414839 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 414903 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 414908 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 414919 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 414964 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 414982 1 C A scaffold11555 ScafM INDEL 0004.scaffold00019 414983 1 . C scaffold11555 ScafM INDEL 0004.scaffold00019 420709 3 TGC ..A scaffold11555 ScafM SNP 0004.scaffold00019 420714 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 420725 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 420735 1 C G scaffold11555 ScafM INDEL 0004.scaffold00019 420741 1 . C scaffold11555 ScafM SNP 0004.scaffold00019 420751 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 420788 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 420804 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 420821 2 AG GA scaffold11555 ScafM SNP 0004.scaffold00019 420853 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 420919 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 420962 1 C . scaffold11555 ScafM SNP 0004.scaffold00019 420964 3 AAA TTT scaffold11555 ScafM INDEL 0004.scaffold00019 420985 12 ............ AACCAAAGACCT scaffold11555 ScafM INDEL 0004.scaffold00019 420986 4 .... AAAA scaffold11555 ScafM INDEL 0004.scaffold00019 420989 2 .G AT scaffold11555 ScafM SNP 0004.scaffold00019 421060 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 421070 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 421090 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 421122 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 421150 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 421155 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 421173 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 421184 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 421188 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 421229 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 421245 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 421249 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 421264 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 421286 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 421308 4 AAAA .... scaffold11555 ScafM SNP 0004.scaffold00019 421313 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 421322 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 421329 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 421347 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 421394 1 A C scaffold11555 ReadM SNP 0004.scaffold00019 426308 1 T C - ReadM SNP 0004.scaffold00019 426347 1 T C - ReadM SNP 0004.scaffold00019 426402 1 G A - ReadM SNP 0004.scaffold00019 426868 1 C T - ReadM SNP 0004.scaffold00019 426875 1 T C - ScafM SNP 0004.scaffold00019 427274 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 427285 1 G T scaffold11555 ScafM INDEL 0004.scaffold00019 427322 2 .. TC scaffold11555 ScafM SNP 0004.scaffold00019 427343 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 427351 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427360 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 427371 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 427373 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 427377 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 427381 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 427410 2 .G CC scaffold11555 ScafM SNP 0004.scaffold00019 427418 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 427422 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 427424 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427442 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 427450 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427452 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 427457 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 427465 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 427492 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427503 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 427536 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427551 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 427567 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429162 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429195 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429239 3 CCC TAA scaffold11555 ScafM INDEL 0004.scaffold00019 429266 3 AAA ... scaffold11555 ScafM SNP 0004.scaffold00019 429271 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 429294 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 429304 1 . C scaffold11555 ScafM SNP 0004.scaffold00019 429307 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 429317 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 429321 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 429344 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 429359 2 AG GC scaffold11555 ScafM SNP 0004.scaffold00019 429383 2 AA TG scaffold11555 ScafM SNP 0004.scaffold00019 429390 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429396 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429398 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 429434 1 . C scaffold11555 ScafM SNP 0004.scaffold00019 429439 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 429450 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429453 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429469 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 429492 1 T A scaffold11555 ScafM INDEL 0004.scaffold00019 429494 1 . G scaffold11555 ScafM SNP 0004.scaffold00019 429498 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 429502 2 TC AT scaffold11555 ScafM SNP 0004.scaffold00019 429509 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 429531 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429536 1 A G scaffold11555 ScafM INDEL 0004.scaffold00019 429550 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 429570 2 AG GA scaffold11555 ScafM SNP 0004.scaffold00019 429577 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 429594 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 429621 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 429625 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429634 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429652 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 429689 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 429703 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 429706 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 429745 1 G C scaffold11555 ScafM INDEL 0004.scaffold00019 429757 8 ........ CTGCAAGT scaffold11555 ScafM INDEL 0004.scaffold00019 429771 2 AT .G scaffold11555 ScafM SNP 0004.scaffold00019 429782 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 429813 3 AAT ... scaffold11555 Both SNP 0004.scaffold00019 429857 1 C T scaffold11555 Both SNP 0004.scaffold00019 429926 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 430009 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 430014 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 430020 1 C G scaffold11555 ReadM SNP 0004.scaffold00019 430395 1 G C - ReadM SNP 0004.scaffold00019 430419 1 C T - ReadM SNP 0004.scaffold00019 430443 1 C A - ReadM SNP 0004.scaffold00019 430529 1 A G - Both INDEL 0004.scaffold00019 430577 1 C . scaffold11555 Both SNP 0004.scaffold00019 430602 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 430633 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 430641 2 CC AT scaffold11555 ScafM SNP 0004.scaffold00019 430692 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 430705 14 TGATTATATTCGCA .............. scaffold11555 ScafM SNP 0004.scaffold00019 430799 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 430811 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 430874 1 A C scaffold11555 ScafM INDEL 0004.scaffold00019 430879 3 GAT ... scaffold11555 ReadM SNP 0004.scaffold00019 431000 1 C T - ReadM SNP 0004.scaffold00019 431020 1 G A - ReadM SNP 0004.scaffold00019 431035 1 T C - ScafM SNP 0004.scaffold00019 431389 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 431393 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 431395 1 G T scaffold11555 ScafM INDEL 0004.scaffold00019 431460 10 TTTAAGCTTT .......... scaffold11555 ScafM SNP 0004.scaffold00019 431480 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 431492 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 431498 1 C . scaffold11555 ScafM INDEL 0004.scaffold00019 431502 1 . A scaffold11555 ScafM SNP 0004.scaffold00019 431540 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 431572 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 431579 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 431583 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 431612 1 A C scaffold11555 ScafM INDEL 0004.scaffold00019 431616 4 .... TGCG scaffold11555 Both SNP 0004.scaffold00019 431714 1 C T scaffold11555 Both SNP 0004.scaffold00019 431792 1 A T scaffold11555 Both SNP 0004.scaffold00019 431821 1 T C scaffold11555 Both SNP 0004.scaffold00019 431898 1 G A scaffold11555 Both SNP 0004.scaffold00019 431993 1 T C scaffold11555 Both SNP 0004.scaffold00019 432180 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 432196 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 432200 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 432207 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 432213 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 432223 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 432226 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 432239 1 A G scaffold11555 Both SNP 0004.scaffold00019 432259 1 T A scaffold11555 Both SNP 0004.scaffold00019 432276 1 G A scaffold11555 Both SNP 0004.scaffold00019 432364 1 G A scaffold11555 Both SNP 0004.scaffold00019 432399 1 A G scaffold11555 Both SNP 0004.scaffold00019 432431 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 432567 7 ACAGAGC ....... scaffold11555 ScafM SNP 0004.scaffold00019 432616 1 T G scaffold11555 ScafM INDEL 0004.scaffold00019 432834 2 TG .. scaffold11555 ScafM SNP 0004.scaffold00019 432863 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 432868 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 432934 3 ATA ... scaffold11555 ScafM SNP 0004.scaffold00019 432950 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 432957 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 432961 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 433674 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 433676 1 G C scaffold11555 ScafM INDEL 0004.scaffold00019 433687 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 433697 2 CA TG scaffold11555 ScafM SNP 0004.scaffold00019 433724 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 433758 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 433782 1 A C scaffold11555 ScafM INDEL 0004.scaffold00019 433787 5 ATTAT ..... scaffold11555 ScafM SNP 0004.scaffold00019 433811 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 433888 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 433902 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 433906 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 433936 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 433959 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 433994 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 434002 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 434007 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 434024 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 435265 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 435267 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 435285 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 435326 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 435330 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 435336 5 TAAAT ..... scaffold11555 ScafM INDEL 0004.scaffold00019 435376 4 CGTA .... scaffold11555 ScafM SNP 0004.scaffold00019 435389 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 435397 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 435414 1 G T scaffold11555 ScafM INDEL 0004.scaffold00019 435437 1 . T scaffold11555 ScafM SNP 0004.scaffold00019 436029 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 436046 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 436054 1 T G scaffold11555 ScafM SNP 0004.scaffold00019 436113 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 436239 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 436246 1 A T scaffold11555 Both SNP 0004.scaffold00019 436338 1 G C scaffold11555 Both SNP 0004.scaffold00019 436426 1 A G scaffold11555 Both SNP 0004.scaffold00019 436560 1 G A scaffold11555 Both SNP 0004.scaffold00019 436922 1 A G scaffold11555 Both SNP 0004.scaffold00019 436997 1 A T scaffold11555 Both SNP 0004.scaffold00019 437020 1 C G scaffold11555 ReadM SNP 0004.scaffold00019 437088 1 G A - ReadM SNP 0004.scaffold00019 437166 1 A G - ReadM SNP 0004.scaffold00019 437202 1 G A - Both SNP 0004.scaffold00019 437359 1 T C scaffold11555 Both SNP 0004.scaffold00019 437389 1 T C scaffold11555 ReadM SNP 0004.scaffold00019 437679 1 A G - Both SNP 0004.scaffold00019 437709 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 437743 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 437762 1 C G scaffold11555 ReadM INDEL 0004.scaffold00019 437773 1 . A - ReadM SNP 0004.scaffold00019 437791 1 A G - ReadM SNP 0004.scaffold00019 437953 1 A C - ReadM SNP 0004.scaffold00019 437969 1 G A - ReadM SNP 0004.scaffold00019 438063 1 T C - Both SNP 0004.scaffold00019 438152 1 A G scaffold11555 Both SNP 0004.scaffold00019 438182 1 G A scaffold11555 Both SNP 0004.scaffold00019 438268 1 A T scaffold11555 Both SNP 0004.scaffold00019 438315 1 T A scaffold11555 Both SNP 0004.scaffold00019 438343 1 T G scaffold11555 Both SNP 0004.scaffold00019 438364 1 T C scaffold11555 Both SNP 0004.scaffold00019 438443 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 438550 1 . A scaffold11555 ScafM INDEL 0004.scaffold00019 438573 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 438577 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 438593 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 438608 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 438638 1 T A scaffold11555 ScafM INDEL 0004.scaffold00019 438673 8 ........ AACGAAAA scaffold11555 ScafM INDEL 0004.scaffold00019 438708 2 .. AA scaffold11555 ScafM SNP 0004.scaffold00019 438710 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 438713 1 T A scaffold11555 Both SNP 0004.scaffold00019 438722 1 T A scaffold11555 ReadM SNP 0004.scaffold00019 438944 1 G T - ReadM SNP 0004.scaffold00019 439060 1 C T - ReadM SNP 0004.scaffold00019 439215 1 A G - ReadM SNP 0004.scaffold00019 439250 1 T G - ReadM SNP 0004.scaffold00019 439316 1 A G - ReadM SNP 0004.scaffold00019 439378 1 G A - Both SNP 0004.scaffold00019 439434 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 439445 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 439459 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 439478 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 439480 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 439483 1 G A scaffold11555 Both SNP 0004.scaffold00019 439522 1 C G scaffold11555 Both SNP 0004.scaffold00019 439576 1 C A scaffold11555 ReadM SNP 0004.scaffold00019 439691 1 T C - ReadM SNP 0004.scaffold00019 439701 1 T A - ReadM SNP 0004.scaffold00019 439714 1 T A - ReadM SNP 0004.scaffold00019 439812 1 T A - ReadM INDEL 0004.scaffold00019 439907 1 T . - ReadM SNP 0004.scaffold00019 439930 1 T A - ReadM SNP 0004.scaffold00019 439947 1 T C - Both SNP 0004.scaffold00019 440175 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 440266 2 GA AT scaffold11555 ScafM SNP 0004.scaffold00019 440328 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 440335 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 440442 1 C T - ReadM SNP 0004.scaffold00019 440454 1 A G - ReadM SNP 0004.scaffold00019 440548 1 C T - Both INDEL 0004.scaffold00019 440642 3 TAT ... scaffold11555 Both SNP 0004.scaffold00019 440700 1 G C scaffold11555 ReadM SNP 0004.scaffold00019 440775 1 T C - ReadM SNP 0004.scaffold00019 440894 1 A G - ReadM SNP 0004.scaffold00019 440972 1 G A - ReadM SNP 0004.scaffold00019 441001 1 A G - ReadM SNP 0004.scaffold00019 441013 1 A G - ReadM SNP 0004.scaffold00019 441036 1 A G - ReadM SNP 0004.scaffold00019 441137 1 C G - ReadM SNP 0004.scaffold00019 441163 1 A C - ReadM SNP 0004.scaffold00019 441169 1 T C - ReadM SNP 0004.scaffold00019 441270 1 G A - ReadM SNP 0004.scaffold00019 441332 1 C A - ReadM SNP 0004.scaffold00019 441427 1 A G - ReadM SNP 0004.scaffold00019 441465 1 C T - ReadM INDEL 0004.scaffold00019 441540 2 AA .. - ReadM SNP 0004.scaffold00019 441659 1 A G - ReadM SNP 0004.scaffold00019 441725 1 T A - ReadM SNP 0004.scaffold00019 442109 1 C G - ReadM SNP 0004.scaffold00019 442147 1 C T - ReadM SNP 0004.scaffold00019 442158 1 G A - ReadM SNP 0004.scaffold00019 442286 1 G T - ReadM SNP 0004.scaffold00019 442321 1 T G - ReadM SNP 0004.scaffold00019 442490 1 T A - ReadM SNP 0004.scaffold00019 442607 1 G A - ReadM SNP 0004.scaffold00019 442669 1 C T - ReadM SNP 0004.scaffold00019 442866 1 C T - ReadM SNP 0004.scaffold00019 442910 1 C T - ReadM SNP 0004.scaffold00019 442913 1 G A - ReadM SNP 0004.scaffold00019 442968 1 T C - ReadM SNP 0004.scaffold00019 443101 1 G A - ReadM SNP 0004.scaffold00019 443219 1 A G - ReadM SNP 0004.scaffold00019 443290 1 T C - ReadM SNP 0004.scaffold00019 443346 1 C T - ReadM SNP 0004.scaffold00019 443396 1 C A - ReadM INDEL 0004.scaffold00019 443455 1 . T - Both SNP 0004.scaffold00019 443728 1 G C scaffold11555 Both INDEL 0004.scaffold00019 443745 1 A . scaffold11555 Both SNP 0004.scaffold00019 443877 1 C G scaffold11555 Both SNP 0004.scaffold00019 443903 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 443913 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 443927 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 443941 1 A C scaffold11555 ScafM INDEL 0004.scaffold00019 443978 4 TTTG .... scaffold11555 ScafM INDEL 0004.scaffold00019 443984 8 TTTTTTTT ........ scaffold11555 ScafM SNP 0004.scaffold00019 444010 1 G A scaffold11555 Both SNP 0004.scaffold00019 444074 1 A G scaffold11555 Both SNP 0004.scaffold00019 444090 1 T A scaffold11555 Both SNP 0004.scaffold00019 444215 1 T C scaffold11555 Both SNP 0004.scaffold00019 444249 1 A C scaffold11555 Both SNP 0004.scaffold00019 444476 1 T A scaffold11555 Both SNP 0004.scaffold00019 444521 1 A T scaffold11555 ScafM INDEL 0004.scaffold00019 444589 1 G . scaffold11555 ScafM SNP 0004.scaffold00019 444603 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 444605 1 T G scaffold11555 ScafM INDEL 0004.scaffold00019 444610 3 CTC ... scaffold11555 ReadM SNP 0004.scaffold00019 444700 1 T C - ReadM SNP 0004.scaffold00019 444741 1 A T - Both SNP 0004.scaffold00019 444838 1 G A scaffold11555 Both SNP 0004.scaffold00019 444863 1 C T scaffold11555 Both SNP 0004.scaffold00019 444922 1 G A scaffold11555 Both SNP 0004.scaffold00019 445085 1 G C scaffold11555 ScafM SNP 0004.scaffold00019 445141 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 445330 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 445351 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 445520 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 445541 1 G T scaffold11555 Both SNP 0004.scaffold00019 445581 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 445789 1 G T scaffold11555 ScafM SNP 0004.scaffold00019 445797 1 C A scaffold11555 ScafM INDEL 0004.scaffold00019 445840 1 A . scaffold11555 ScafM INDEL 0004.scaffold00019 445843 7 CTTGTGG ....... scaffold11555 ScafM INDEL 0004.scaffold00019 445851 3 GAC ... scaffold11555 ScafM INDEL 0004.scaffold00019 445896 1 . A scaffold11555 ScafM INDEL 0004.scaffold00019 445900 1 T . scaffold11555 ScafM SNP 0004.scaffold00019 446008 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 446011 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 446081 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 446088 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 446099 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 446478 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 446528 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 446595 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 446603 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 446611 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 446638 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 446750 1 T C scaffold11555 ScafM INDEL 0004.scaffold00019 446792 2 CA .. scaffold11555 ScafM SNP 0004.scaffold00019 446796 1 T A scaffold11555 ScafM INDEL 0004.scaffold00019 446800 3 GAA ... scaffold11555 ScafM INDEL 0004.scaffold00019 446805 5 GTGTA ..... scaffold11555 ScafM SNP 0004.scaffold00019 446854 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 446912 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 446962 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 446978 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 447044 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 447186 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 447199 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 447257 1 C T scaffold11555 Both INDEL 0004.scaffold00019 447357 1 A . scaffold11555 ScafM SNP 0004.scaffold00019 447365 1 A C scaffold11555 Both SNP 0004.scaffold00019 447453 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 447466 1 T C scaffold11555 Both SNP 0004.scaffold00019 448573 1 A G scaffold11555 Both SNP 0004.scaffold00019 448579 1 T A scaffold11555 Both SNP 0004.scaffold00019 448585 1 T C scaffold11555 Both SNP 0004.scaffold00019 448741 1 C T scaffold11555 Both SNP 0004.scaffold00019 448775 1 G A scaffold11555 Both SNP 0004.scaffold00019 448908 1 A C scaffold11555 Both SNP 0004.scaffold00019 448912 1 T A scaffold11555 Both SNP 0004.scaffold00019 448991 1 G T scaffold11555 Both SNP 0004.scaffold00019 449058 1 C T scaffold11555 Both SNP 0004.scaffold00019 449099 1 A T scaffold11555 Both SNP 0004.scaffold00019 449141 1 C T scaffold11555 Both SNP 0004.scaffold00019 449162 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 449265 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 449286 3 ... CGT scaffold11555 Both SNP 0004.scaffold00019 449467 1 G A scaffold11555 Both SNP 0004.scaffold00019 449569 1 T G scaffold11555 Both SNP 0004.scaffold00019 449661 1 A G scaffold11555 Both SNP 0004.scaffold00019 449715 1 T A scaffold11555 Both SNP 0004.scaffold00019 449943 1 A T scaffold11555 Both SNP 0004.scaffold00019 450228 1 C A scaffold11555 Both SNP 0004.scaffold00019 450434 1 T A scaffold11555 Both SNP 0004.scaffold00019 450456 1 G C scaffold11555 Both SNP 0004.scaffold00019 450460 1 A T scaffold11555 Both SNP 0004.scaffold00019 450522 1 G A scaffold11555 Both SNP 0004.scaffold00019 450532 1 A G scaffold11555 Both SNP 0004.scaffold00019 450558 1 T G scaffold11555 Both SNP 0004.scaffold00019 450580 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 450625 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 450627 1 A G scaffold11555 Both SNP 0004.scaffold00019 450692 1 G T scaffold11555 Both SNP 0004.scaffold00019 450737 1 C T scaffold11555 Both SNP 0004.scaffold00019 450767 1 A G scaffold11555 Both SNP 0004.scaffold00019 450785 1 A T scaffold11555 Both SNP 0004.scaffold00019 450979 1 T C scaffold11555 Both INDEL 0004.scaffold00019 451001 1 T . scaffold11555 Both SNP 0004.scaffold00019 451022 1 A G scaffold11555 Both SNP 0004.scaffold00019 451067 1 A G scaffold11555 Both SNP 0004.scaffold00019 451093 1 A C scaffold11555 Both SNP 0004.scaffold00019 451101 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 451134 1 T A scaffold11555 Both SNP 0004.scaffold00019 451195 1 C T scaffold11555 Both SNP 0004.scaffold00019 451246 1 T C scaffold11555 Both SNP 0004.scaffold00019 451343 1 T A scaffold11555 Both SNP 0004.scaffold00019 451431 1 T C scaffold11555 Both SNP 0004.scaffold00019 451438 1 T G scaffold11555 Both SNP 0004.scaffold00019 451463 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 451505 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 451781 1 C G - ReadM SNP 0004.scaffold00019 452403 1 C A - ReadM SNP 0004.scaffold00019 452462 1 T C - ReadM SNP 0004.scaffold00019 452487 1 C T - ReadM SNP 0004.scaffold00019 452496 1 T G - ReadM SNP 0004.scaffold00019 453958 1 A C - ReadM SNP 0004.scaffold00019 454006 1 C T - ReadM SNP 0004.scaffold00019 454015 1 A T - ReadM SNP 0004.scaffold00019 454054 1 A G - ReadM SNP 0004.scaffold00019 454117 1 C T - ReadM INDEL 0004.scaffold00019 454169 1 A . - Both SNP 0004.scaffold00019 454283 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 454387 53 ..................................................... GTGCCCAACTTGAAGGAAGATCCGGTTGAATATGAGGAGCCCAAAGGAAAAGA scaffold11555 ReadM SNP 0004.scaffold00019 460257 1 G A - ReadM SNP 0004.scaffold00019 460374 1 G A - ReadM SNP 0004.scaffold00019 460389 1 G T - ReadM SNP 0004.scaffold00019 460447 1 T C - ReadM SNP 0004.scaffold00019 460556 1 C T - ReadM SNP 0004.scaffold00019 460876 1 G A - ReadM SNP 0004.scaffold00019 460925 1 T C - ReadM SNP 0004.scaffold00019 460949 1 A T - ReadM SNP 0004.scaffold00019 460954 1 G C - ReadM SNP 0004.scaffold00019 461008 1 T C - ReadM SNP 0004.scaffold00019 461029 1 G T - ReadM SNP 0004.scaffold00019 461083 1 A C - ReadM INDEL 0004.scaffold00019 461194 1 A . - ReadM SNP 0004.scaffold00019 461226 1 G T - ReadM INDEL 0004.scaffold00019 461444 1 A . - ReadM SNP 0004.scaffold00019 461492 1 C T - ReadM SNP 0004.scaffold00019 461587 1 T A - ReadM SNP 0004.scaffold00019 461644 1 G T - ReadM INDEL 0004.scaffold00019 461714 1 C . - ReadM SNP 0004.scaffold00019 461729 1 A G - ReadM SNP 0004.scaffold00019 461734 1 G T - ReadM SNP 0004.scaffold00019 461805 1 G A - ReadM SNP 0004.scaffold00019 461832 1 T C - ReadM SNP 0004.scaffold00019 461962 1 G A - ReadM SNP 0004.scaffold00019 462023 1 A G - ReadM SNP 0004.scaffold00019 462037 1 C G - ReadM SNP 0004.scaffold00019 462419 1 A T - ReadM SNP 0004.scaffold00019 462477 1 A G - ReadM SNP 0004.scaffold00019 462543 1 T G - ReadM INDEL 0004.scaffold00019 462643 2 .. AA - ReadM SNP 0004.scaffold00019 462694 1 T C - ReadM SNP 0004.scaffold00019 462728 1 A C - ReadM SNP 0004.scaffold00019 462779 1 G T - ReadM SNP 0004.scaffold00019 462822 1 A C - ReadM SNP 0004.scaffold00019 462868 1 T C - ReadM SNP 0004.scaffold00019 462948 1 A C - ReadM SNP 0004.scaffold00019 463105 1 G A - ReadM SNP 0004.scaffold00019 463173 1 A G - ReadM SNP 0004.scaffold00019 463219 1 G C - ScafM SNP 0004.scaffold00019 464044 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 464058 1 A C scaffold11555 ScafM SNP 0004.scaffold00019 464102 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 464211 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 464227 1 A G scaffold11555 ReadM SNP 0004.scaffold00019 464452 1 T C - Both SNP 0004.scaffold00019 464548 1 C T scaffold11555 Both SNP 0004.scaffold00019 464712 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 464746 1 A C scaffold11555 Both SNP 0004.scaffold00019 464888 1 T G scaffold11555 Both SNP 0004.scaffold00019 464899 1 T A scaffold11555 Both SNP 0004.scaffold00019 464940 1 T A scaffold11555 ReadM SNP 0004.scaffold00019 464992 1 T C - ReadM SNP 0004.scaffold00019 465301 1 G A - ReadM SNP 0004.scaffold00019 465363 1 G C - ReadM SNP 0004.scaffold00019 465416 1 C T - ReadM SNP 0004.scaffold00019 465570 1 C A - ReadM SNP 0004.scaffold00019 465625 1 T C - ReadM SNP 0004.scaffold00019 465636 1 T C - ReadM SNP 0004.scaffold00019 465653 1 A T - ReadM SNP 0004.scaffold00019 465719 1 A G - ReadM SNP 0004.scaffold00019 465763 1 G C - ReadM SNP 0004.scaffold00019 465783 1 T C - ReadM SNP 0004.scaffold00019 465808 1 A G - ReadM SNP 0004.scaffold00019 465876 1 A G - ReadM SNP 0004.scaffold00019 465922 1 G A - ReadM SNP 0004.scaffold00019 465935 1 C T - ReadM SNP 0004.scaffold00019 466123 1 T C - ReadM SNP 0004.scaffold00019 466140 1 T G - ReadM SNP 0004.scaffold00019 466232 1 A C - ReadM SNP 0004.scaffold00019 466241 1 T C - ReadM SNP 0004.scaffold00019 466262 1 T C - ReadM SNP 0004.scaffold00019 466425 1 A C - ReadM INDEL 0004.scaffold00019 466484 1 C . - ReadM INDEL 0004.scaffold00019 466535 2 .. GA - ReadM SNP 0004.scaffold00019 466550 1 C A - ReadM INDEL 0004.scaffold00019 466659 1 A . - ReadM SNP 0004.scaffold00019 466729 1 C A - ReadM SNP 0004.scaffold00019 466764 1 C G - ReadM SNP 0004.scaffold00019 466804 1 A G - ReadM SNP 0004.scaffold00019 466852 1 C T - ReadM SNP 0004.scaffold00019 466869 1 G T - ScafM SNP 0004.scaffold00019 467281 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 467385 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 467421 1 A G scaffold11555 ScafM SNP 0004.scaffold00019 467433 1 A T scaffold11555 ScafM SNP 0004.scaffold00019 467467 1 C G scaffold11555 ScafM SNP 0004.scaffold00019 467797 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 467854 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 467875 2 AA .. scaffold11555 ScafM SNP 0004.scaffold00019 468249 1 G A scaffold11555 ScafM INDEL 0004.scaffold00019 468297 1 T . scaffold11555 Both SNP 0004.scaffold00019 468321 1 G A scaffold11555 ReadM SNP 0004.scaffold00019 468340 1 C A - ReadM SNP 0004.scaffold00019 468356 1 G A - ReadM SNP 0004.scaffold00019 468534 1 G C - ReadM SNP 0004.scaffold00019 468597 1 A G - ReadM SNP 0004.scaffold00019 468694 1 G A - Both SNP 0004.scaffold00019 468954 1 T C scaffold11555 ReadM SNP 0004.scaffold00019 469156 1 A T - ReadM SNP 0004.scaffold00019 469544 1 A G - Both SNP 0004.scaffold00019 469590 1 A C scaffold11555 Both SNP 0004.scaffold00019 469696 1 C T scaffold11555 Both SNP 0004.scaffold00019 470076 1 A G scaffold11555 Both SNP 0004.scaffold00019 470103 1 C A scaffold11555 Both SNP 0004.scaffold00019 470140 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 470293 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 470313 1 C T scaffold11555 ScafM INDEL 0004.scaffold00019 470358 2 .G AA scaffold11555 ScafM SNP 0004.scaffold00019 470368 1 C G scaffold11555 Both SNP 0004.scaffold00019 470491 1 T C scaffold11555 ReadM SNP 0004.scaffold00019 470661 1 A T - ReadM SNP 0004.scaffold00019 471070 1 G C - ReadM SNP 0004.scaffold00019 471446 1 G A - ReadM SNP 0004.scaffold00019 471461 1 C G - ScafM SNP 0004.scaffold00019 472043 2 CG TC scaffold11555 ScafM SNP 0004.scaffold00019 472065 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 472131 1 C T scaffold11555 ScafM SNP 0004.scaffold00019 472213 1 G A scaffold11555 ScafM SNP 0004.scaffold00019 472244 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 472246 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 472267 1 T C scaffold11555 ScafM SNP 0004.scaffold00019 472286 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 472329 1 C A scaffold11555 ScafM SNP 0004.scaffold00019 472372 1 T A scaffold11555 ScafM SNP 0004.scaffold00019 473273 1 C A scaffold65210 ScafM SNP 0004.scaffold00019 473323 1 G A scaffold65210 ScafM SNP 0004.scaffold00019 473585 1 G C scaffold65210 ScafM SNP 0004.scaffold00019 473599 1 A G scaffold65210 ScafM INDEL 0004.scaffold00019 473649 6 ACCAAA ...... scaffold65210 ScafM SNP 0004.scaffold00019 473707 1 G A scaffold65210 ScafM SNP 0004.scaffold00019 473758 1 A T scaffold65210 ScafM SNP 0004.scaffold00019 473778 1 G A scaffold65210 ScafM SNP 0004.scaffold00019 473813 1 A G scaffold65210 ScafM SNP 0004.scaffold00019 473819 1 T C scaffold65210 ReadM SNP 0004.scaffold00019 474016 1 A T - ReadM SNP 0004.scaffold00019 474034 1 T G - Both SNP 0004.scaffold00019 474054 1 T C scaffold65210 ScafM SNP 0004.scaffold00019 474090 2 CA TG scaffold65210 ScafM SNP 0004.scaffold00019 474101 1 C T scaffold65210 Both SNP 0004.scaffold00019 474148 1 C T scaffold65210 Both SNP 0004.scaffold00019 474254 1 T A scaffold65210 ReadM SNP 0004.scaffold00019 474272 1 T C - ReadM SNP 0004.scaffold00019 474316 1 T G - ReadM SNP 0004.scaffold00019 474323 1 G T - ScafM SNP 0004.scaffold00019 474372 1 A T scaffold65210 ScafM SNP 0004.scaffold00019 474387 1 T C scaffold65210 ReadM SNP 0004.scaffold00019 474567 1 G C - ReadM SNP 0004.scaffold00019 474572 1 G C - ReadM SNP 0004.scaffold00019 474697 1 C T - ReadM SNP 0004.scaffold00019 474700 1 G A - ReadM SNP 0004.scaffold00019 474712 1 T A - ReadM SNP 0004.scaffold00019 474919 1 A C - ReadM SNP 0004.scaffold00019 474947 1 T A - ReadM SNP 0004.scaffold00019 475461 1 A T - ScafM SNP 0004.scaffold00019 475581 1 A C scaffold41248 ReadM SNP 0004.scaffold00019 475665 1 T G - ReadM SNP 0004.scaffold00019 475741 1 A T - ReadM SNP 0004.scaffold00019 475783 1 A G - ReadM SNP 0004.scaffold00019 475821 1 C T - ScafM SNP 0004.scaffold00019 476099 1 C T scaffold41248 ScafM SNP 0004.scaffold00019 476129 1 A T scaffold41248 ReadM SNP 0004.scaffold00019 477099 1 A C - ReadM SNP 0004.scaffold00019 477111 1 A C - ReadM SNP 0004.scaffold00019 477376 1 C T - ReadM SNP 0004.scaffold00019 477386 1 G A - ReadM INDEL 0004.scaffold00019 477417 1 A . - ReadM SNP 0004.scaffold00019 477601 1 G A - ReadM INDEL 0004.scaffold00019 477619 2 CA .. - ReadM SNP 0004.scaffold00019 477695 1 G T - ReadM SNP 0004.scaffold00019 477857 1 T C - ReadM SNP 0004.scaffold00019 478119 1 G A - ReadM SNP 0004.scaffold00019 478161 1 T G - ReadM SNP 0004.scaffold00019 478235 1 G A - ReadM SNP 0004.scaffold00019 478306 1 T G - ReadM SNP 0004.scaffold00019 478326 1 G A - ReadM SNP 0004.scaffold00019 478430 1 C T - ReadM SNP 0004.scaffold00019 478507 1 T C - ScafM SNP 0004.scaffold00019 479076 1 G A scaffold10134 ReadM SNP 0004.scaffold00019 481769 1 G C - ReadM SNP 0004.scaffold00019 482848 1 G C - ScafM SNP 0004.scaffold00019 483657 1 T A scaffold10134 ScafM SNP 0004.scaffold00019 483670 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 483762 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 483777 1 G A scaffold10134 ReadM INDEL 0004.scaffold00019 484016 1 T . - ReadM SNP 0004.scaffold00019 484096 1 C G - ReadM SNP 0004.scaffold00019 484188 1 A G - ReadM SNP 0004.scaffold00019 484192 1 T C - ReadM SNP 0004.scaffold00019 484232 1 G A - ReadM INDEL 0004.scaffold00019 484475 1 A . - ReadM SNP 0004.scaffold00019 484612 1 G T - ReadM SNP 0004.scaffold00019 484621 1 C A - ReadM SNP 0004.scaffold00019 484673 1 C G - ReadM SNP 0004.scaffold00019 485079 1 T A - ReadM SNP 0004.scaffold00019 485190 1 G T - ReadM SNP 0004.scaffold00019 485525 1 A T - ReadM SNP 0004.scaffold00019 485843 1 T A - ReadM SNP 0004.scaffold00019 485986 1 A G - ScafM SNP 0004.scaffold00019 488730 1 C T scaffold10134 ScafM INDEL 0004.scaffold00019 488764 5 ..... GATCT scaffold10134 ScafM SNP 0004.scaffold00019 488796 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 488805 1 A T scaffold10134 ScafM SNP 0004.scaffold00019 488887 1 C G scaffold10134 ScafM SNP 0004.scaffold00019 491591 1 G T scaffold10134 ScafM INDEL 0004.scaffold00019 491635 1 C . scaffold10134 ScafM INDEL 0004.scaffold00019 491644 1 . T scaffold10134 ScafM SNP 0004.scaffold00019 491676 1 T G scaffold10134 ScafM INDEL 0004.scaffold00019 491684 1 . T scaffold10134 ScafM INDEL 0004.scaffold00019 491731 3 ... CTT scaffold10134 ScafM SNP 0004.scaffold00019 491747 1 A T scaffold10134 ScafM SNP 0004.scaffold00019 491774 1 T A scaffold10134 ScafM SNP 0004.scaffold00019 491795 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 491856 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 491865 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 491872 1 G A scaffold10134 ScafM INDEL 0004.scaffold00019 491926 3 ATT ... scaffold10134 ScafM SNP 0004.scaffold00019 491949 1 T G scaffold10134 ScafM INDEL 0004.scaffold00019 491988 1 . G scaffold10134 ScafM SNP 0004.scaffold00019 491992 2 AA TT scaffold10134 ScafM SNP 0004.scaffold00019 514540 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 514566 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 514575 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 514596 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 514606 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 514630 2 GC AT scaffold10134 ScafM SNP 0004.scaffold00019 514701 2 GT TA scaffold10134 ScafM SNP 0004.scaffold00019 514767 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 514779 2 CT TA scaffold10134 ReadM INDEL 0004.scaffold00019 515197 1 T . - Both INDEL 0004.scaffold00019 515199 1 A . scaffold10134 Both SNP 0004.scaffold00019 515241 1 C T scaffold10134 Both SNP 0004.scaffold00019 515285 1 G T scaffold10134 ScafM INDEL 0004.scaffold00019 515342 7 ....... CACTGAC scaffold10134 ScafM INDEL 0004.scaffold00019 515404 2 TG .. scaffold10134 ScafM SNP 0004.scaffold00019 515463 1 T A scaffold10134 ScafM INDEL 0004.scaffold00019 515478 1 G . scaffold10134 ScafM SNP 0004.scaffold00019 515503 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 515510 1 C G scaffold10134 ScafM SNP 0004.scaffold00019 515521 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 515540 1 A G scaffold10134 ScafM INDEL 0004.scaffold00019 515679 2 TC .A scaffold10134 ScafM INDEL 0004.scaffold00019 515685 1 . G scaffold10134 Both SNP 0004.scaffold00019 515716 1 C G scaffold10134 Both SNP 0004.scaffold00019 515779 1 A T scaffold10134 ScafM SNP 0004.scaffold00019 515809 1 T A scaffold10134 Both SNP 0004.scaffold00019 516124 1 A G scaffold10134 Both SNP 0004.scaffold00019 516272 1 T C scaffold10134 Both SNP 0004.scaffold00019 516340 1 T A scaffold10134 Both SNP 0004.scaffold00019 516379 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 516433 2 CA GT scaffold10134 Both SNP 0004.scaffold00019 516467 1 A C scaffold10134 Both SNP 0004.scaffold00019 516502 1 T G scaffold10134 Both SNP 0004.scaffold00019 516538 1 G T scaffold10134 Both SNP 0004.scaffold00019 516587 1 G A scaffold10134 Both SNP 0004.scaffold00019 516613 1 C A scaffold10134 ReadM SNP 0004.scaffold00019 516686 1 T A - ReadM SNP 0004.scaffold00019 516694 1 A T - ReadM SNP 0004.scaffold00019 516696 1 A T - ReadM SNP 0004.scaffold00019 516793 1 A C - ReadM SNP 0004.scaffold00019 516797 1 A G - ScafM SNP 0004.scaffold00019 516831 2 AT GC scaffold10134 Both SNP 0004.scaffold00019 516853 1 T C scaffold10134 Both SNP 0004.scaffold00019 516965 1 T C scaffold10134 Both SNP 0004.scaffold00019 517083 1 A T scaffold10134 Both SNP 0004.scaffold00019 517238 1 G A scaffold10134 Both SNP 0004.scaffold00019 517273 1 G T scaffold10134 Both SNP 0004.scaffold00019 517338 1 G C scaffold10134 Both SNP 0004.scaffold00019 517431 1 C T scaffold10134 Both SNP 0004.scaffold00019 517528 1 T C scaffold10134 ReadM SNP 0004.scaffold00019 517575 1 A C - ReadM SNP 0004.scaffold00019 517720 1 G A - ScafM SNP 0004.scaffold00019 517833 1 A G scaffold10134 ReadM SNP 0004.scaffold00019 518120 1 A G - ReadM SNP 0004.scaffold00019 518202 1 G A - Both SNP 0004.scaffold00019 518415 1 T A scaffold10134 ScafM INDEL 0004.scaffold00019 518417 2 .. AA scaffold10134 ScafM SNP 0004.scaffold00019 518481 1 C A scaffold10134 ScafM INDEL 0004.scaffold00019 518527 3 TTT ... scaffold10134 ScafM SNP 0004.scaffold00019 518531 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 518536 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 518545 1 T A scaffold10134 Both SNP 0004.scaffold00019 518578 1 G A scaffold10134 Both SNP 0004.scaffold00019 518628 1 C T scaffold10134 Both SNP 0004.scaffold00019 518635 1 C T scaffold10134 Both SNP 0004.scaffold00019 518689 1 A C scaffold10134 Both SNP 0004.scaffold00019 518697 1 A C scaffold10134 Both SNP 0004.scaffold00019 518758 1 T G scaffold10134 Both SNP 0004.scaffold00019 518803 1 G C scaffold10134 Both SNP 0004.scaffold00019 518878 1 A G scaffold10134 Both SNP 0004.scaffold00019 518890 1 T G scaffold10134 Both SNP 0004.scaffold00019 518906 1 T A scaffold10134 ReadM SNP 0004.scaffold00019 519117 1 A G - ReadM SNP 0004.scaffold00019 519214 1 T G - ScafM SNP 0004.scaffold00019 519233 1 C A scaffold10134 ScafM SNP 0004.scaffold00019 519235 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 519249 1 C G scaffold10134 ScafM SNP 0004.scaffold00019 519256 1 C T scaffold10134 Both SNP 0004.scaffold00019 519305 1 G T scaffold10134 Both SNP 0004.scaffold00019 519349 1 C T scaffold10134 Both INDEL 0004.scaffold00019 519438 1 C . scaffold10134 ScafM SNP 0004.scaffold00019 519481 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 519483 1 T C scaffold10134 ReadM SNP 0004.scaffold00019 519511 1 C T - ReadM SNP 0004.scaffold00019 519575 1 C T - ReadM INDEL 0004.scaffold00019 519647 1 . T - Both INDEL 0004.scaffold00019 519775 1 A . scaffold10134 ScafM INDEL 0004.scaffold00019 519807 12 ............ TAAACACTATCA scaffold10134 ScafM SNP 0004.scaffold00019 519863 1 A T scaffold10134 Both SNP 0004.scaffold00019 519881 1 A C scaffold10134 ScafM SNP 0004.scaffold00019 519967 2 TA CG scaffold10134 ScafM SNP 0004.scaffold00019 519984 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 520000 1 G C scaffold10134 ScafM INDEL 0004.scaffold00019 520028 2 AG .. scaffold10134 ScafM SNP 0004.scaffold00019 520038 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 520042 1 A G scaffold10134 ReadM SNP 0004.scaffold00019 520348 1 A G - ReadM SNP 0004.scaffold00019 520439 1 T C - ReadM SNP 0004.scaffold00019 520442 1 A G - ReadM SNP 0004.scaffold00019 520489 1 T C - Both SNP 0004.scaffold00019 520537 1 A C scaffold10134 Both SNP 0004.scaffold00019 520595 1 T C scaffold10134 Both SNP 0004.scaffold00019 520612 1 A T scaffold10134 ScafM INDEL 0004.scaffold00019 520637 1 C . scaffold10134 ScafM INDEL 0004.scaffold00019 520639 1 C . scaffold10134 ScafM INDEL 0004.scaffold00019 520682 4 ..CC TGTA scaffold10134 ScafM SNP 0004.scaffold00019 520686 2 CC AA scaffold10134 ScafM INDEL 0004.scaffold00019 520688 1 . G scaffold10134 ScafM INDEL 0004.scaffold00019 520689 2 .G TA scaffold10134 ScafM INDEL 0004.scaffold00019 520692 2 .. TT scaffold10134 ScafM SNP 0004.scaffold00019 520694 1 G T scaffold10134 ScafM SNP 0004.scaffold00019 520696 1 C A scaffold10134 ScafM SNP 0004.scaffold00019 520699 2 GC TA scaffold10134 ScafM SNP 0004.scaffold00019 520702 1 A C scaffold10134 ScafM SNP 0004.scaffold00019 520704 1 C G scaffold10134 ScafM INDEL 0004.scaffold00019 520705 4 ..CC GGTT scaffold10134 ScafM SNP 0004.scaffold00019 520725 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 520755 2 GC AA scaffold10134 ScafM INDEL 0004.scaffold00019 520761 2 CC .. scaffold10134 ScafM SNP 0004.scaffold00019 520807 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 520826 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 520874 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 520882 1 A T scaffold10134 ReadM SNP 0004.scaffold00019 520950 1 A G - Both SNP 0004.scaffold00019 520992 1 G A scaffold10134 Both SNP 0004.scaffold00019 521013 1 C T scaffold10134 ScafM INDEL 0004.scaffold00019 521158 2 AA .. scaffold10134 Both SNP 0004.scaffold00019 521165 1 A T scaffold10134 Both SNP 0004.scaffold00019 521224 1 T C scaffold10134 Both SNP 0004.scaffold00019 521235 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 521337 1 A C scaffold10134 ScafM SNP 0004.scaffold00019 521344 1 T G scaffold10134 ScafM SNP 0004.scaffold00019 521346 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 521352 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 521364 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 521380 1 G A scaffold10134 ScafM INDEL 0004.scaffold00019 521423 2 .. TT scaffold10134 ScafM INDEL 0004.scaffold00019 521425 1 . T scaffold10134 Both SNP 0004.scaffold00019 521467 1 G C scaffold10134 ReadM SNP 0004.scaffold00019 521543 1 G A - ReadM SNP 0004.scaffold00019 521640 1 G A - ReadM INDEL 0004.scaffold00019 521688 1 . T - ReadM SNP 0004.scaffold00019 521732 1 T A - ReadM SNP 0004.scaffold00019 521766 1 T G - ReadM SNP 0004.scaffold00019 521770 1 T A - ReadM SNP 0004.scaffold00019 521835 1 A G - ReadM SNP 0004.scaffold00019 521913 1 T C - Both INDEL 0004.scaffold00019 521937 1 C . scaffold10134 Both SNP 0004.scaffold00019 522043 1 T C scaffold10134 Both SNP 0004.scaffold00019 522161 1 G T scaffold10134 Both SNP 0004.scaffold00019 522187 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 522314 1 G T scaffold10134 ScafM SNP 0004.scaffold00019 522334 1 T A scaffold10134 ScafM SNP 0004.scaffold00019 522374 1 G A scaffold10134 ReadM SNP 0004.scaffold00019 522482 1 G A - ReadM SNP 0004.scaffold00019 522639 1 T G - Both SNP 0004.scaffold00019 522649 1 C T scaffold10134 Both SNP 0004.scaffold00019 522708 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 522800 2 TT AC scaffold10134 ScafM SNP 0004.scaffold00019 522808 1 G A scaffold10134 Both SNP 0004.scaffold00019 522888 1 T A scaffold10134 Both INDEL 0004.scaffold00019 523102 1 T . scaffold10134 Both SNP 0004.scaffold00019 523129 1 T C scaffold10134 Both SNP 0004.scaffold00019 523197 1 G A scaffold10134 Both SNP 0004.scaffold00019 523207 1 A T scaffold10134 ScafM INDEL 0004.scaffold00019 523221 1 C . scaffold10134 ScafM INDEL 0004.scaffold00019 523234 9 TCTAGGTAT ......... scaffold10134 ScafM INDEL 0004.scaffold00019 523245 11 AACTCAACATA ........... scaffold10134 ScafM INDEL 0004.scaffold00019 523257 2 AG .. scaffold10134 Both SNP 0004.scaffold00019 523346 1 T A scaffold10134 Both SNP 0004.scaffold00019 523450 1 T C scaffold10134 Both SNP 0004.scaffold00019 523466 1 T C scaffold10134 Both SNP 0004.scaffold00019 523533 1 G A scaffold10134 ScafM SNP 0004.scaffold00019 523541 1 G T scaffold10134 Both SNP 0004.scaffold00019 523574 1 A C scaffold10134 ScafM SNP 0004.scaffold00019 523590 1 G C scaffold10134 ScafM SNP 0004.scaffold00019 523595 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 523620 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 523633 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 523643 1 C A scaffold10134 Both SNP 0004.scaffold00019 523672 1 A T scaffold10134 Both SNP 0004.scaffold00019 523681 1 C A scaffold10134 Both SNP 0004.scaffold00019 523693 1 T G scaffold10134 ScafM SNP 0004.scaffold00019 523782 2 TT CC scaffold10134 Both SNP 0004.scaffold00019 523944 1 A T scaffold10134 ScafM INDEL 0004.scaffold00019 523992 2 .. AA scaffold10134 ScafM SNP 0004.scaffold00019 523994 1 T A scaffold10134 Both SNP 0004.scaffold00019 524029 1 T G scaffold10134 Both SNP 0004.scaffold00019 524118 1 C T scaffold10134 Both SNP 0004.scaffold00019 524218 1 A T scaffold10134 ReadM SNP 0004.scaffold00019 524263 1 T C - ReadM SNP 0004.scaffold00019 524270 1 T C - ReadM SNP 0004.scaffold00019 524287 1 G C - ScafM INDEL 0004.scaffold00019 524454 15 AATCACAACATATAA ............... scaffold10134 Both SNP 0004.scaffold00019 524488 1 C T scaffold10134 ReadM SNP 0004.scaffold00019 524574 1 G T - ReadM SNP 0004.scaffold00019 524591 1 C T - ReadM SNP 0004.scaffold00019 524646 1 A C - ReadM INDEL 0004.scaffold00019 524649 1 . A - ReadM SNP 0004.scaffold00019 524752 1 T C - ReadM SNP 0004.scaffold00019 525052 1 G A - Both SNP 0004.scaffold00019 525075 1 G A scaffold10134 Both SNP 0004.scaffold00019 525118 1 T A scaffold10134 ReadM SNP 0004.scaffold00019 525241 1 C G - ReadM SNP 0004.scaffold00019 525295 1 C T - ReadM SNP 0004.scaffold00019 525387 1 C G - Both SNP 0004.scaffold00019 525463 1 A G scaffold10134 ScafM SNP 0004.scaffold00019 525516 1 C A scaffold10134 ScafM SNP 0004.scaffold00019 525523 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 525528 1 G A scaffold10134 ScafM INDEL 0004.scaffold00019 525531 3 ATT ... scaffold10134 Both INDEL 0004.scaffold00019 525665 2 AA .. scaffold10134 Both SNP 0004.scaffold00019 525765 1 C T scaffold10134 Both SNP 0004.scaffold00019 525909 1 G A scaffold10134 Both SNP 0004.scaffold00019 525980 1 A G scaffold10134 ReadM SNP 0004.scaffold00019 526005 1 C T - ReadM SNP 0004.scaffold00019 526011 1 A C - Both SNP 0004.scaffold00019 526175 1 G C scaffold10134 Both SNP 0004.scaffold00019 526199 1 A G scaffold10134 Both SNP 0004.scaffold00019 526218 1 T C scaffold10134 ScafM SNP 0004.scaffold00019 526258 2 AG GC scaffold10134 ScafM SNP 0004.scaffold00019 526311 1 C T scaffold10134 ScafM SNP 0004.scaffold00019 526319 2 GC AT scaffold10134 ScafM SNP 0004.scaffold00019 526332 1 G A scaffold10134 Both SNP 0004.scaffold00019 526400 1 G A scaffold10134 Both SNP 0004.scaffold00019 526408 1 A G scaffold10134 Both SNP 0004.scaffold00019 526462 1 A G scaffold10134 ReadM INDEL 0004.scaffold00019 526573 2 .. GA - ReadM INDEL 0004.scaffold00019 526721 3 ... GGG - ReadM SNP 0004.scaffold00019 526783 1 C G - ReadM SNP 0004.scaffold00019 526813 1 T A - ReadM SNP 0004.scaffold00019 526820 1 A T - ReadM SNP 0004.scaffold00019 526866 1 A G - ReadM SNP 0004.scaffold00019 527021 1 A C - ReadM INDEL 0004.scaffold00019 527117 3 ... CTG - Both SNP 0004.scaffold00019 527462 1 C T scaffold10134 ReadM SNP 0004.scaffold00019 527747 1 G A - ReadM SNP 0004.scaffold00019 527922 1 A G - ReadM SNP 0004.scaffold00019 527986 1 A G - Both SNP 0004.scaffold00019 528048 1 T G scaffold10134 ReadM SNP 0004.scaffold00019 528170 1 A G - ReadM SNP 0004.scaffold00019 528187 1 C T - ReadM SNP 0004.scaffold00019 528307 1 A C - ReadM SNP 0004.scaffold00019 528322 1 A G - ReadM SNP 0004.scaffold00019 528377 1 T C - ReadM SNP 0004.scaffold00019 528452 1 A G - ReadM SNP 0004.scaffold00019 528528 1 G A - ReadM SNP 0004.scaffold00019 528536 1 G A - ReadM SNP 0004.scaffold00019 528719 1 G C - ReadM SNP 0004.scaffold00019 529009 1 G A - ReadM SNP 0004.scaffold00019 529149 1 A G - ReadM SNP 0004.scaffold00019 529273 1 C T - ReadM SNP 0004.scaffold00019 529314 1 T A - ReadM SNP 0004.scaffold00019 529488 1 A G - ReadM SNP 0004.scaffold00019 529500 1 T C - ReadM SNP 0004.scaffold00019 529532 1 T C - ReadM SNP 0004.scaffold00019 529586 1 A T - ReadM SNP 0004.scaffold00019 529616 1 G A - ScafM SNP 0004.scaffold00019 529975 1 A C scaffold10134 ScafM SNP 0004.scaffold00019 529994 1 G A scaffold10134 ReadM SNP 0004.scaffold00019 532819 1 T G - ReadM SNP 0004.scaffold00019 533030 1 G C - ReadM SNP 0004.scaffold00019 533095 1 G C - ReadM SNP 0004.scaffold00019 533116 1 C T - ReadM INDEL 0004.scaffold00019 533118 1 . G - ReadM SNP 0004.scaffold00019 533239 1 T C - ReadM SNP 0004.scaffold00019 533291 1 G C - ReadM SNP 0004.scaffold00019 533313 1 G A - ReadM SNP 0004.scaffold00019 533331 1 G A - ReadM SNP 0004.scaffold00019 533380 1 G A - ReadM SNP 0004.scaffold00019 533421 1 C T - ReadM SNP 0004.scaffold00019 533533 1 G T - ReadM SNP 0004.scaffold00019 533548 1 G A - ReadM SNP 0004.scaffold00019 533652 1 T G - ReadM SNP 0004.scaffold00019 533710 1 C T - ReadM SNP 0004.scaffold00019 533753 1 T C - ReadM SNP 0004.scaffold00019 533807 1 C T - ReadM SNP 0004.scaffold00019 533812 1 G T - ReadM SNP 0004.scaffold00019 533910 1 A G - ReadM SNP 0004.scaffold00019 534000 1 T A - ReadM SNP 0004.scaffold00019 534034 1 A C - ReadM SNP 0004.scaffold00019 534133 1 A T - ReadM SNP 0004.scaffold00019 534189 1 A C - ReadM SNP 0004.scaffold00019 534254 1 T G - ReadM SNP 0004.scaffold00019 534288 1 G A - ReadM SNP 0004.scaffold00019 534327 1 T C - ReadM SNP 0004.scaffold00019 534333 1 C A - ReadM SNP 0004.scaffold00019 534369 1 A G - ReadM SNP 0004.scaffold00019 534436 1 A T - ReadM SNP 0004.scaffold00019 534453 1 A T - ReadM SNP 0004.scaffold00019 534520 1 T C - ReadM SNP 0004.scaffold00019 534572 1 C G - ReadM SNP 0004.scaffold00019 534830 1 C T - ReadM SNP 0004.scaffold00019 534848 1 G A - ReadM SNP 0004.scaffold00019 534912 1 C T - ReadM SNP 0004.scaffold00019 535017 1 T C - ReadM SNP 0004.scaffold00019 535038 1 G A - ReadM SNP 0004.scaffold00019 535047 1 C G - ReadM SNP 0004.scaffold00019 535136 1 G T - ReadM SNP 0004.scaffold00019 535151 1 G A - ReadM SNP 0004.scaffold00019 535188 1 G T - ReadM SNP 0004.scaffold00019 535219 1 A G - ReadM SNP 0004.scaffold00019 535234 1 C T - ReadM SNP 0004.scaffold00019 535337 1 C T - ReadM SNP 0004.scaffold00019 535470 1 C T - ReadM SNP 0004.scaffold00019 535477 1 T A - ReadM SNP 0004.scaffold00019 535499 1 A G - ReadM INDEL 0004.scaffold00019 535576 2 .. CC - ReadM INDEL 0004.scaffold00019 535577 2 .. CA - ReadM INDEL 0004.scaffold00019 535579 2 .. CC - ReadM SNP 0004.scaffold00019 535665 1 C T - ReadM SNP 0004.scaffold00019 535771 1 A G - ReadM SNP 0004.scaffold00019 535900 1 T C - ReadM SNP 0004.scaffold00019 535927 1 A G - ReadM SNP 0004.scaffold00019 536040 1 A G - ReadM SNP 0004.scaffold00019 536323 1 C T - ReadM SNP 0004.scaffold00019 536334 1 G A - ReadM SNP 0004.scaffold00019 536398 1 A C - ReadM SNP 0004.scaffold00019 536460 1 C A - ReadM SNP 0004.scaffold00019 536487 1 G T - ReadM INDEL 0004.scaffold00019 536509 1 . T - ReadM SNP 0004.scaffold00019 536546 1 A T - ReadM SNP 0004.scaffold00019 536575 1 A G - ReadM SNP 0004.scaffold00019 536628 1 A T - ReadM SNP 0004.scaffold00019 536636 1 A G - ReadM SNP 0004.scaffold00019 536795 1 G A - ReadM SNP 0004.scaffold00019 536803 1 T C - ReadM SNP 0004.scaffold00019 536830 1 A G - ReadM SNP 0004.scaffold00019 536862 1 G C - ReadM SNP 0004.scaffold00019 536995 1 G A - ReadM SNP 0004.scaffold00019 537262 1 T C - Both SNP 0004.scaffold00019 537304 1 A C scaffold24504 Both SNP 0004.scaffold00019 537344 1 G A scaffold24504 Both SNP 0004.scaffold00019 537355 1 C T scaffold24504 Both SNP 0004.scaffold00019 537378 1 C T scaffold24504 Both SNP 0004.scaffold00019 537389 1 G A scaffold24504 Both SNP 0004.scaffold00019 537427 1 A G scaffold24504 Both SNP 0004.scaffold00019 537491 1 G A scaffold24504 Both SNP 0004.scaffold00019 537497 1 T C scaffold24504 ScafM INDEL 0004.scaffold00019 537652 4 .... TATA scaffold24504 Both SNP 0004.scaffold00019 537680 1 G A scaffold24504 Both SNP 0004.scaffold00019 537693 1 T G scaffold24504 Both SNP 0004.scaffold00019 537725 1 C A scaffold24504 Both SNP 0004.scaffold00019 537790 1 G C scaffold24504 ScafM SNP 0004.scaffold00019 537853 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 537876 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 537897 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 537904 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 537924 2 GG AC scaffold24504 Both SNP 0004.scaffold00019 538047 1 C A scaffold24504 Both SNP 0004.scaffold00019 538137 1 A G scaffold24504 ReadM SNP 0004.scaffold00019 538247 1 T C - ReadM SNP 0004.scaffold00019 538301 1 G A - ReadM SNP 0004.scaffold00019 538372 1 T C - ReadM SNP 0004.scaffold00019 538803 1 G A - ReadM SNP 0004.scaffold00019 538838 1 A T - ReadM SNP 0004.scaffold00019 538892 1 A G - ReadM SNP 0004.scaffold00019 539014 2 CT GA - ReadM SNP 0004.scaffold00019 539134 1 G A - Both SNP 0004.scaffold00019 539298 1 C G scaffold24504 Both SNP 0004.scaffold00019 539414 1 G T scaffold24504 Both SNP 0004.scaffold00019 539459 1 C G scaffold24504 Both SNP 0004.scaffold00019 539653 1 C G scaffold24504 ReadM SNP 0004.scaffold00019 540027 1 G T - ReadM SNP 0004.scaffold00019 540062 1 T G - ReadM SNP 0004.scaffold00019 540123 1 C T - ReadM SNP 0004.scaffold00019 540138 1 C T - ReadM SNP 0004.scaffold00019 540176 1 C T - ReadM SNP 0004.scaffold00019 540186 1 C G - ReadM SNP 0004.scaffold00019 540203 1 C T - ScafM SNP 0004.scaffold00019 540327 1 C G scaffold24504 ScafM INDEL 0004.scaffold00019 540332 8 ........ AACCGATC scaffold24504 ScafM SNP 0004.scaffold00019 540383 2 CT AC scaffold24504 Both SNP 0004.scaffold00019 540432 1 G A scaffold24504 Both SNP 0004.scaffold00019 540511 1 G A scaffold24504 Both SNP 0004.scaffold00019 540521 1 T A scaffold24504 ScafM SNP 0004.scaffold00019 540569 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 540582 1 T A scaffold24504 ScafM SNP 0004.scaffold00019 540600 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 540626 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 540633 1 A C scaffold24504 ScafM SNP 0004.scaffold00019 540682 2 TT CA scaffold24504 Both INDEL 0004.scaffold00019 540782 2 GG .. scaffold24504 Both SNP 0004.scaffold00019 540865 1 A G scaffold24504 Both SNP 0004.scaffold00019 540876 1 A T scaffold24504 ScafM SNP 0004.scaffold00019 540895 1 G C scaffold24504 Both SNP 0004.scaffold00019 540929 1 C T scaffold24504 Both SNP 0004.scaffold00019 540940 1 A C scaffold24504 Both SNP 0004.scaffold00019 540984 1 C G scaffold24504 Both SNP 0004.scaffold00019 541053 1 T C scaffold24504 Both SNP 0004.scaffold00019 541108 1 A C scaffold24504 Both SNP 0004.scaffold00019 541117 1 T A scaffold24504 ScafM SNP 0004.scaffold00019 541143 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 541166 1 C T scaffold24504 Both SNP 0004.scaffold00019 541259 1 A G scaffold24504 Both SNP 0004.scaffold00019 541306 1 A T scaffold24504 Both SNP 0004.scaffold00019 541318 1 C A scaffold24504 ScafM INDEL 0004.scaffold00019 541374 1 . T scaffold24504 Both SNP 0004.scaffold00019 541397 1 A G scaffold24504 Both SNP 0004.scaffold00019 541548 1 G A scaffold24504 Both SNP 0004.scaffold00019 541579 1 A G scaffold24504 Both SNP 0004.scaffold00019 541589 1 A G scaffold24504 Both SNP 0004.scaffold00019 541680 1 G C scaffold24504 Both SNP 0004.scaffold00019 541952 1 C T scaffold24504 Both SNP 0004.scaffold00019 542001 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 542135 1 C T scaffold24504 Both SNP 0004.scaffold00019 542247 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 542284 1 C T scaffold24504 Both INDEL 0004.scaffold00019 542295 1 . A scaffold24504 Both SNP 0004.scaffold00019 542631 1 T A scaffold24504 Both SNP 0004.scaffold00019 542767 1 C T scaffold24504 Both SNP 0004.scaffold00019 542857 1 T C scaffold24504 Both INDEL 0004.scaffold00019 542859 2 .. TG scaffold24504 ReadM INDEL 0004.scaffold00019 542865 2 .. TC - Both SNP 0004.scaffold00019 543097 1 G A scaffold24504 Both SNP 0004.scaffold00019 543111 1 G A scaffold24504 ReadM SNP 0004.scaffold00019 543144 1 A T - Both SNP 0004.scaffold00019 543222 1 T A scaffold24504 Both SNP 0004.scaffold00019 543225 1 G A scaffold24504 Both SNP 0004.scaffold00019 543308 1 A C scaffold24504 Both SNP 0004.scaffold00019 543345 1 G A scaffold24504 ReadM INDEL 0004.scaffold00019 543450 1 . T - ReadM SNP 0004.scaffold00019 543504 1 T C - ReadM SNP 0004.scaffold00019 543529 1 A C - ReadM SNP 0004.scaffold00019 543558 1 T A - ReadM SNP 0004.scaffold00019 543583 1 T C - ReadM SNP 0004.scaffold00019 543624 1 G A - ReadM SNP 0004.scaffold00019 543643 1 A C - ReadM SNP 0004.scaffold00019 543670 1 G A - ReadM SNP 0004.scaffold00019 543685 1 G T - ReadM SNP 0004.scaffold00019 543771 1 A G - ReadM SNP 0004.scaffold00019 543775 1 A T - ReadM SNP 0004.scaffold00019 543851 1 A G - ReadM SNP 0004.scaffold00019 543902 1 A G - ReadM SNP 0004.scaffold00019 543955 1 G C - ReadM SNP 0004.scaffold00019 543967 1 C G - ReadM SNP 0004.scaffold00019 544013 1 G T - ReadM SNP 0004.scaffold00019 544019 1 T C - ReadM SNP 0004.scaffold00019 544255 1 T C - ReadM SNP 0004.scaffold00019 544300 1 G A - ReadM SNP 0004.scaffold00019 544309 1 A G - ReadM SNP 0004.scaffold00019 544403 1 C T - ReadM SNP 0004.scaffold00019 544448 1 G C - ScafM SNP 0004.scaffold00019 544953 1 A G scaffold31947 ScafM SNP 0004.scaffold00019 544995 1 A T scaffold31947 ScafM SNP 0004.scaffold00019 545123 1 A G scaffold24504 ScafM INDEL 0004.scaffold00019 545302 2 .A TT scaffold24504 ScafM SNP 0004.scaffold00019 545320 1 A T scaffold24504 ScafM SNP 0004.scaffold00019 545323 1 A C scaffold24504 ScafM SNP 0004.scaffold00019 545427 1 G T scaffold24504 ScafM SNP 0004.scaffold00019 545537 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 545569 2 CC GT scaffold24504 Both SNP 0004.scaffold00019 545613 1 G T scaffold24504 Both SNP 0004.scaffold00019 545673 1 G A scaffold24504 ScafM INDEL 0004.scaffold00019 545702 1 A . scaffold24504 ScafM INDEL 0004.scaffold00019 545716 1 . A scaffold24504 Both SNP 0004.scaffold00019 545772 1 G C scaffold24504 Both SNP 0004.scaffold00019 545883 1 A T scaffold24504 Both SNP 0004.scaffold00019 546067 1 T C scaffold24504 Both SNP 0004.scaffold00019 546103 1 C T scaffold24504 Both SNP 0004.scaffold00019 546164 1 T C scaffold24504 Both SNP 0004.scaffold00019 546222 1 T A scaffold24504 Both SNP 0004.scaffold00019 546327 1 G A scaffold24504 Both SNP 0004.scaffold00019 546348 1 C T scaffold24504 Both SNP 0004.scaffold00019 546480 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 546511 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 546513 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 546535 1 C A scaffold24504 ScafM SNP 0004.scaffold00019 546548 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 546572 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 546586 1 G A scaffold24504 Both SNP 0004.scaffold00019 546748 1 A T scaffold24504 ScafM INDEL 0004.scaffold00019 546892 3 ... ATT scaffold24504 ScafM SNP 0004.scaffold00019 546922 1 T A scaffold24504 Both SNP 0004.scaffold00019 546982 1 C G scaffold24504 Both SNP 0004.scaffold00019 547130 1 C T scaffold24504 Both SNP 0004.scaffold00019 547182 1 C A scaffold24504 Both SNP 0004.scaffold00019 547187 1 A C scaffold24504 Both SNP 0004.scaffold00019 547210 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 547320 1 C A scaffold24504 Both SNP 0004.scaffold00019 547421 1 G T scaffold24504 Both SNP 0004.scaffold00019 547454 1 T G scaffold24504 Both SNP 0004.scaffold00019 547498 1 A G scaffold24504 Both SNP 0004.scaffold00019 547754 1 A T scaffold24504 Both SNP 0004.scaffold00019 547796 1 T C scaffold24504 Both SNP 0004.scaffold00019 547913 1 A G scaffold24504 Both SNP 0004.scaffold00019 547976 1 A G scaffold24504 Both SNP 0004.scaffold00019 548042 1 A G scaffold24504 Both SNP 0004.scaffold00019 548128 1 G A scaffold24504 Both SNP 0004.scaffold00019 548173 1 A T scaffold24504 Both SNP 0004.scaffold00019 548335 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 548344 1 T A scaffold24504 ScafM SNP 0004.scaffold00019 548346 1 A T scaffold24504 Both SNP 0004.scaffold00019 548434 1 C T scaffold24504 Both SNP 0004.scaffold00019 548565 1 G T scaffold24504 Both SNP 0004.scaffold00019 548612 1 T C scaffold24504 Both SNP 0004.scaffold00019 548681 1 A C scaffold24504 Both SNP 0004.scaffold00019 548738 1 C T scaffold24504 ReadM SNP 0004.scaffold00019 548961 1 T C - Both SNP 0004.scaffold00019 549616 1 T G scaffold24504 Both SNP 0004.scaffold00019 549689 1 A G scaffold24504 Both INDEL 0004.scaffold00019 549698 1 . T scaffold24504 Both SNP 0004.scaffold00019 549711 1 T C scaffold24504 ScafM INDEL 0004.scaffold00019 549854 1 . C scaffold24504 ScafM INDEL 0004.scaffold00019 549855 1 . C scaffold24504 ScafM SNP 0004.scaffold00019 549890 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 549907 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 549924 1 A G scaffold24504 Both SNP 0004.scaffold00019 549943 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 550065 1 A C scaffold24504 ScafM SNP 0004.scaffold00019 550153 1 T C scaffold24504 ScafM INDEL 0004.scaffold00019 550176 1 . A scaffold24504 ScafM SNP 0004.scaffold00019 550203 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 550208 1 G A scaffold24504 ScafM INDEL 0004.scaffold00019 550215 1 . A scaffold24504 ScafM INDEL 0004.scaffold00019 550221 1 . T scaffold24504 ScafM SNP 0004.scaffold00019 550237 1 T C scaffold24504 Both SNP 0004.scaffold00019 550265 1 A G scaffold24504 ReadM SNP 0004.scaffold00019 550367 1 A G - ScafM INDEL 0004.scaffold00019 550503 10 .......... TCGATAAATA scaffold24504 ScafM SNP 0004.scaffold00019 550585 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 550664 1 A G scaffold24504 Both SNP 0004.scaffold00019 550730 1 G T scaffold24504 Both SNP 0004.scaffold00019 550798 1 A G scaffold24504 Both SNP 0004.scaffold00019 550960 1 C A scaffold24504 Both SNP 0004.scaffold00019 551033 1 G A scaffold24504 ScafM INDEL 0004.scaffold00019 551068 10 .......... ATTATGCGAA scaffold24504 Both SNP 0004.scaffold00019 551108 1 G A scaffold24504 Both SNP 0004.scaffold00019 551524 1 A G scaffold24504 Both SNP 0004.scaffold00019 551591 1 G A scaffold24504 ReadM SNP 0004.scaffold00019 551776 1 T A - ScafM INDEL 0004.scaffold00019 551898 1 G . scaffold24504 ScafM SNP 0004.scaffold00019 551928 1 A T scaffold24504 ScafM SNP 0004.scaffold00019 551973 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 552203 1 C A scaffold24504 ScafM SNP 0004.scaffold00019 552283 1 G A scaffold24504 ScafM INDEL 0004.scaffold00019 552310 2 TA .. scaffold24504 ScafM INDEL 0004.scaffold00019 552352 2 .. AA scaffold24504 ScafM SNP 0004.scaffold00019 552387 1 C A scaffold24504 ReadM SNP 0004.scaffold00019 552913 1 G C - ReadM SNP 0004.scaffold00019 552964 1 G A - ReadM INDEL 0004.scaffold00019 553059 1 . T - ReadM SNP 0004.scaffold00019 553126 1 T C - ReadM SNP 0004.scaffold00019 553162 1 T A - ReadM SNP 0004.scaffold00019 553210 1 G A - ReadM SNP 0004.scaffold00019 553225 1 A T - ReadM INDEL 0004.scaffold00019 553367 1 . A - Both SNP 0004.scaffold00019 553568 1 T A scaffold24504 Both SNP 0004.scaffold00019 553574 1 G A scaffold24504 Both SNP 0004.scaffold00019 553625 1 T C scaffold24504 Both SNP 0004.scaffold00019 553709 1 G T scaffold24504 Both SNP 0004.scaffold00019 553711 1 G A scaffold24504 Both SNP 0004.scaffold00019 553772 1 C T scaffold24504 Both SNP 0004.scaffold00019 553781 1 G C scaffold24504 ScafM SNP 0004.scaffold00019 553839 1 C A scaffold24504 ScafM SNP 0004.scaffold00019 553843 1 T A scaffold24504 Both SNP 0004.scaffold00019 553967 1 C T scaffold24504 Both SNP 0004.scaffold00019 554002 1 C G scaffold24504 ReadM SNP 0004.scaffold00019 554154 1 C A - ReadM SNP 0004.scaffold00019 554232 1 A T - ReadM SNP 0004.scaffold00019 554285 1 A C - ReadM SNP 0004.scaffold00019 554310 1 G A - ReadM SNP 0004.scaffold00019 554413 1 C G - ReadM SNP 0004.scaffold00019 554493 1 T G - ReadM SNP 0004.scaffold00019 554533 1 C T - ReadM SNP 0004.scaffold00019 554545 1 G A - ReadM SNP 0004.scaffold00019 554610 1 T C - ReadM SNP 0004.scaffold00019 554728 1 T C - ReadM SNP 0004.scaffold00019 554810 1 T G - ReadM SNP 0004.scaffold00019 554875 1 T C - ReadM SNP 0004.scaffold00019 554894 1 G A - ReadM SNP 0004.scaffold00019 554941 1 T G - ReadM SNP 0004.scaffold00019 555090 1 C A - ReadM INDEL 0004.scaffold00019 555123 1 A . - ReadM SNP 0004.scaffold00019 555148 1 T G - ReadM SNP 0004.scaffold00019 555294 1 G A - ReadM SNP 0004.scaffold00019 555492 1 A G - ReadM SNP 0004.scaffold00019 555549 1 A C - ReadM SNP 0004.scaffold00019 555598 1 C A - ReadM SNP 0004.scaffold00019 555676 1 A G - ReadM SNP 0004.scaffold00019 555687 1 A G - ReadM SNP 0004.scaffold00019 555711 1 T C - ReadM SNP 0004.scaffold00019 555751 1 C T - ReadM SNP 0004.scaffold00019 555824 1 T C - ReadM SNP 0004.scaffold00019 555917 1 C T - ReadM SNP 0004.scaffold00019 555974 1 T A - ReadM SNP 0004.scaffold00019 556033 1 G A - ReadM SNP 0004.scaffold00019 556058 1 G T - ReadM SNP 0004.scaffold00019 556081 1 C T - ReadM SNP 0004.scaffold00019 556212 1 G C - ScafM SNP 0004.scaffold00019 556813 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 556845 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 556900 1 A C scaffold24504 ScafM INDEL 0004.scaffold00019 556927 1 G . scaffold24504 ScafM SNP 0004.scaffold00019 556987 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 557063 1 G A scaffold24504 ScafM SNP 0004.scaffold00019 557107 1 A G scaffold24504 Both SNP 0004.scaffold00019 557373 1 A T scaffold24504 Both SNP 0004.scaffold00019 557380 1 C T scaffold24504 Both SNP 0004.scaffold00019 557409 1 A C scaffold24504 ScafM SNP 0004.scaffold00019 557445 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 557452 1 T G scaffold24504 Both SNP 0004.scaffold00019 557468 1 G A scaffold24504 Both SNP 0004.scaffold00019 557511 1 A C scaffold24504 Both SNP 0004.scaffold00019 557668 1 A G scaffold24504 Both SNP 0004.scaffold00019 557677 1 C T scaffold24504 ScafM INDEL 0004.scaffold00019 557709 2 .. AT scaffold24504 ScafM SNP 0004.scaffold00019 557719 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 557759 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 557798 1 A C scaffold24504 ScafM INDEL 0004.scaffold00019 557822 15 TGTTGGCTTGCTTAG ............... scaffold24504 ScafM INDEL 0004.scaffold00019 557840 1 T . scaffold24504 ScafM INDEL 0004.scaffold00019 557844 4 ACTA .... scaffold24504 ScafM INDEL 0004.scaffold00019 557849 1 G . scaffold24504 ScafM INDEL 0004.scaffold00019 557853 1 C . scaffold24504 Both SNP 0004.scaffold00019 557887 1 G A scaffold24504 Both SNP 0004.scaffold00019 557912 1 G A scaffold24504 Both SNP 0004.scaffold00019 558002 1 A C scaffold24504 Both SNP 0004.scaffold00019 558086 1 C G scaffold24504 Both SNP 0004.scaffold00019 558107 1 G T scaffold24504 Both SNP 0004.scaffold00019 558119 1 G C scaffold24504 Both SNP 0004.scaffold00019 558357 1 A G scaffold24504 Both SNP 0004.scaffold00019 558478 1 T A scaffold24504 Both SNP 0004.scaffold00019 558484 1 G C scaffold24504 Both SNP 0004.scaffold00019 558529 1 A G scaffold24504 Both SNP 0004.scaffold00019 558584 1 A G scaffold24504 Both SNP 0004.scaffold00019 558627 1 T A scaffold24504 ReadM SNP 0004.scaffold00019 558717 1 T A - Both SNP 0004.scaffold00019 558799 1 G T scaffold24504 Both SNP 0004.scaffold00019 558843 1 G A scaffold24504 Both SNP 0004.scaffold00019 558896 1 T C scaffold24504 Both SNP 0004.scaffold00019 559000 1 G A scaffold24504 ReadM SNP 0004.scaffold00019 559322 1 A C - ReadM SNP 0004.scaffold00019 559373 1 T C - Both SNP 0004.scaffold00019 559486 1 T G scaffold24504 ReadM SNP 0004.scaffold00019 559567 1 A C - Both SNP 0004.scaffold00019 559584 1 G A scaffold24504 Both SNP 0004.scaffold00019 559718 1 A T scaffold24504 ScafM SNP 0004.scaffold00019 559748 1 C G scaffold24504 ScafM SNP 0004.scaffold00019 559750 1 A C scaffold24504 Both SNP 0004.scaffold00019 559798 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 559832 1 G C scaffold24504 ScafM SNP 0004.scaffold00019 559834 1 C A scaffold24504 Both SNP 0004.scaffold00019 559955 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 560018 1 A G scaffold24504 Both SNP 0004.scaffold00019 560117 1 T A scaffold24504 Both SNP 0004.scaffold00019 560130 1 T A scaffold24504 Both SNP 0004.scaffold00019 560149 1 C T scaffold24504 Both SNP 0004.scaffold00019 560152 1 G T scaffold24504 Both SNP 0004.scaffold00019 560228 1 T C scaffold24504 Both SNP 0004.scaffold00019 560457 1 T G scaffold24504 ReadM SNP 0004.scaffold00019 560574 1 C T - ScafM SNP 0004.scaffold00019 560609 2 TC AG scaffold24504 ReadM SNP 0004.scaffold00019 560690 1 C T - ReadM SNP 0004.scaffold00019 560751 1 G A - Both INDEL 0004.scaffold00019 560831 1 . T scaffold24504 ScafM SNP 0004.scaffold00019 560946 2 AC GA scaffold24504 Both SNP 0004.scaffold00019 561043 1 T C scaffold24504 ReadM SNP 0004.scaffold00019 561059 1 T C - ReadM SNP 0004.scaffold00019 561115 1 T G - ReadM SNP 0004.scaffold00019 561123 1 C T - ReadM SNP 0004.scaffold00019 561147 1 G A - ScafM INDEL 0004.scaffold00019 561227 2 TT .. scaffold24504 ScafM INDEL 0004.scaffold00019 561230 3 CTT ... scaffold24504 ScafM INDEL 0004.scaffold00019 561234 2 AC .G scaffold24504 ScafM INDEL 0004.scaffold00019 561239 2 AT .. scaffold24504 ScafM INDEL 0004.scaffold00019 561242 2 TT .. scaffold24504 ScafM SNP 0004.scaffold00019 561245 1 A C scaffold24504 ScafM INDEL 0004.scaffold00019 561247 6 GTAATT ...... scaffold24504 ScafM SNP 0004.scaffold00019 561258 1 A C scaffold24504 ScafM SNP 0004.scaffold00019 561994 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 562027 1 T G scaffold24504 ScafM INDEL 0004.scaffold00019 562034 2 AT .. scaffold24504 ReadM SNP 0004.scaffold00019 562308 1 G T - ReadM SNP 0004.scaffold00019 562379 1 G A - ReadM SNP 0004.scaffold00019 562464 1 C T - ReadM SNP 0004.scaffold00019 562518 1 G T - ReadM SNP 0004.scaffold00019 562589 1 A C - ReadM SNP 0004.scaffold00019 562620 1 A G - ReadM SNP 0004.scaffold00019 562627 1 C G - ReadM INDEL 0004.scaffold00019 562710 1 T . - ReadM SNP 0004.scaffold00019 562751 1 G A - ReadM SNP 0004.scaffold00019 562837 1 G A - ReadM SNP 0004.scaffold00019 562937 1 T A - ReadM SNP 0004.scaffold00019 562967 1 C T - ReadM SNP 0004.scaffold00019 563112 1 C T - ReadM SNP 0004.scaffold00019 563206 1 T C - ReadM SNP 0004.scaffold00019 563249 1 G A - ReadM SNP 0004.scaffold00019 563301 1 C G - ReadM SNP 0004.scaffold00019 563436 1 C T - ScafM INDEL 0004.scaffold00019 563497 9 TAGTGGAAA ......... scaffold24504 Both SNP 0004.scaffold00019 563543 1 C A scaffold24504 Both SNP 0004.scaffold00019 563569 1 C T scaffold24504 Both SNP 0004.scaffold00019 563571 1 A G scaffold24504 Both SNP 0004.scaffold00019 563648 1 C A scaffold24504 Both SNP 0004.scaffold00019 563705 1 T G scaffold24504 Both SNP 0004.scaffold00019 563728 1 T C scaffold24504 Both SNP 0004.scaffold00019 563861 1 A T scaffold24504 Both SNP 0004.scaffold00019 563903 1 T C scaffold24504 Both INDEL 0004.scaffold00019 563914 1 . A scaffold24504 ScafM SNP 0004.scaffold00019 563944 1 C T scaffold24504 ReadM SNP 0004.scaffold00019 564003 1 C A - ReadM SNP 0004.scaffold00019 564017 1 T C - ReadM SNP 0004.scaffold00019 564132 1 T C - ReadM SNP 0004.scaffold00019 564175 1 C T - ReadM SNP 0004.scaffold00019 564214 1 G A - ReadM SNP 0004.scaffold00019 564225 1 T A - ReadM SNP 0004.scaffold00019 564260 1 G A - ReadM SNP 0004.scaffold00019 564310 1 T C - ReadM SNP 0004.scaffold00019 564320 1 G A - ReadM SNP 0004.scaffold00019 564378 1 T C - ReadM SNP 0004.scaffold00019 564460 1 T C - ReadM SNP 0004.scaffold00019 564543 1 C G - ReadM SNP 0004.scaffold00019 564574 1 C T - ReadM SNP 0004.scaffold00019 564579 1 T C - ReadM SNP 0004.scaffold00019 564686 1 C G - ReadM SNP 0004.scaffold00019 564813 1 C A - ReadM SNP 0004.scaffold00019 564932 1 A G - ReadM SNP 0004.scaffold00019 564939 1 T C - ReadM SNP 0004.scaffold00019 564957 1 A G - ReadM SNP 0004.scaffold00019 564984 1 G T - ReadM SNP 0004.scaffold00019 565022 1 A C - Both SNP 0004.scaffold00019 565086 1 A G scaffold24504 Both SNP 0004.scaffold00019 565255 1 T G scaffold24504 Both SNP 0004.scaffold00019 565280 1 A T scaffold24504 ReadM SNP 0004.scaffold00019 565438 1 A T - ReadM SNP 0004.scaffold00019 565507 1 T G - ReadM SNP 0004.scaffold00019 565548 1 A T - ReadM SNP 0004.scaffold00019 565567 1 C A - ReadM SNP 0004.scaffold00019 565624 1 C T - ReadM SNP 0004.scaffold00019 565641 1 G T - ReadM SNP 0004.scaffold00019 565663 1 T C - ReadM INDEL 0004.scaffold00019 565715 1 . T - ReadM SNP 0004.scaffold00019 565746 1 C A - ReadM SNP 0004.scaffold00019 565780 1 G C - ReadM SNP 0004.scaffold00019 565822 1 G A - ReadM SNP 0004.scaffold00019 565924 1 G A - ReadM SNP 0004.scaffold00019 566013 1 T A - ReadM SNP 0004.scaffold00019 566073 1 C T - ReadM SNP 0004.scaffold00019 566092 1 T C - ReadM INDEL 0004.scaffold00019 566162 1 . A - ReadM SNP 0004.scaffold00019 566268 1 A C - ReadM SNP 0004.scaffold00019 566279 1 C T - ReadM SNP 0004.scaffold00019 566342 1 A G - ReadM SNP 0004.scaffold00019 566369 1 T C - ReadM SNP 0004.scaffold00019 566450 1 C T - ReadM SNP 0004.scaffold00019 566465 1 G C - ReadM SNP 0004.scaffold00019 566489 1 A T - ReadM SNP 0004.scaffold00019 566682 1 A G - ReadM SNP 0004.scaffold00019 566828 1 G A - ReadM SNP 0004.scaffold00019 566833 1 C A - ReadM SNP 0004.scaffold00019 567016 1 C T - ReadM SNP 0004.scaffold00019 567058 1 G A - ReadM SNP 0004.scaffold00019 567103 1 A T - ReadM SNP 0004.scaffold00019 567106 1 A G - ReadM SNP 0004.scaffold00019 567166 1 G A - ReadM SNP 0004.scaffold00019 567184 1 G C - ReadM INDEL 0004.scaffold00019 567262 1 A . - ReadM SNP 0004.scaffold00019 567385 1 A C - ReadM SNP 0004.scaffold00019 567482 1 A G - ReadM SNP 0004.scaffold00019 567594 1 T C - ReadM SNP 0004.scaffold00019 567669 1 G A - ReadM SNP 0004.scaffold00019 567783 1 A G - ReadM SNP 0004.scaffold00019 567963 1 A G - ReadM SNP 0004.scaffold00019 567968 1 T G - ReadM SNP 0004.scaffold00019 568000 1 G C - ReadM SNP 0004.scaffold00019 568128 1 T C - ReadM SNP 0004.scaffold00019 568296 1 T C - ReadM SNP 0004.scaffold00019 568413 1 C T - ReadM SNP 0004.scaffold00019 568498 1 T A - ReadM SNP 0004.scaffold00019 568539 1 C G - ReadM INDEL 0004.scaffold00019 568629 1 A . - ReadM SNP 0004.scaffold00019 568714 1 T A - ReadM SNP 0004.scaffold00019 568773 1 C A - ReadM SNP 0004.scaffold00019 568855 1 G T - ReadM SNP 0004.scaffold00019 568868 1 C G - ReadM SNP 0004.scaffold00019 568910 1 A G - ReadM SNP 0004.scaffold00019 569088 1 C A - ReadM SNP 0004.scaffold00019 569166 1 T A - ReadM SNP 0004.scaffold00019 569169 1 T C - ReadM SNP 0004.scaffold00019 569201 1 T C - ReadM SNP 0004.scaffold00019 569204 1 C G - ReadM SNP 0004.scaffold00019 569232 1 A G - ReadM SNP 0004.scaffold00019 569293 1 C G - ReadM SNP 0004.scaffold00019 569320 1 G A - ReadM SNP 0004.scaffold00019 569364 1 T C - ReadM SNP 0004.scaffold00019 569392 1 T A - ReadM SNP 0004.scaffold00019 569539 1 A G - ReadM SNP 0004.scaffold00019 569650 1 A G - ReadM SNP 0004.scaffold00019 569709 1 A C - ReadM SNP 0004.scaffold00019 569762 1 G A - ReadM SNP 0004.scaffold00019 569840 1 A C - ReadM SNP 0004.scaffold00019 569963 1 C T - ReadM SNP 0004.scaffold00019 570067 1 T A - ReadM SNP 0004.scaffold00019 570161 1 G T - ReadM SNP 0004.scaffold00019 570244 1 A T - ReadM SNP 0004.scaffold00019 570398 1 G T - ReadM SNP 0004.scaffold00019 570425 1 C T - ReadM SNP 0004.scaffold00019 574659 1 A C - ReadM SNP 0004.scaffold00019 574665 1 A G - ReadM SNP 0004.scaffold00019 574781 1 A C - ReadM SNP 0004.scaffold00019 574800 1 G A - ReadM SNP 0004.scaffold00019 574820 1 A G - ReadM SNP 0004.scaffold00019 575014 1 C T - ReadM SNP 0004.scaffold00019 575090 1 G C - ReadM SNP 0004.scaffold00019 575208 1 T A - ReadM SNP 0004.scaffold00019 575258 1 A C - ReadM SNP 0004.scaffold00019 575315 1 G C - ReadM SNP 0004.scaffold00019 575379 1 C A - ReadM SNP 0004.scaffold00019 575443 1 C A - ReadM SNP 0004.scaffold00019 575476 1 C A - ReadM SNP 0004.scaffold00019 575490 1 A T - ReadM SNP 0004.scaffold00019 575511 1 G A - ReadM SNP 0004.scaffold00019 575686 1 T A - Both SNP 0004.scaffold00019 575976 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 576093 1 C T scaffold24504 ScafM SNP 0004.scaffold00019 576122 1 C G scaffold24504 ScafM SNP 0004.scaffold00019 576215 1 A G scaffold24504 ScafM SNP 0004.scaffold00019 576243 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 576622 1 C T scaffold24504 Both INDEL 0004.scaffold00019 576946 1 . A scaffold24504 ScafM SNP 0004.scaffold00019 576948 1 C A scaffold24504 Both SNP 0004.scaffold00019 577012 1 G A scaffold24504 Both INDEL 0004.scaffold00019 577025 1 A . scaffold24504 Both SNP 0004.scaffold00019 577292 1 C T scaffold24504 Both SNP 0004.scaffold00019 577489 1 T C scaffold24504 Both SNP 0004.scaffold00019 577571 1 C A scaffold24504 ScafM INDEL 0004.scaffold00019 577853 4 ATAT .... scaffold24504 ScafM SNP 0004.scaffold00019 577876 1 G A scaffold24504 Both SNP 0004.scaffold00019 577892 1 T A scaffold24504 Both SNP 0004.scaffold00019 577998 1 T G scaffold24504 ReadM SNP 0004.scaffold00019 578213 1 C T - ReadM SNP 0004.scaffold00019 578287 1 T C - ReadM SNP 0004.scaffold00019 578359 1 C T - ReadM SNP 0004.scaffold00019 578504 1 G A - ReadM SNP 0004.scaffold00019 578523 1 A G - ReadM SNP 0004.scaffold00019 578537 1 A G - ReadM SNP 0004.scaffold00019 578572 1 A G - ReadM SNP 0004.scaffold00019 578603 1 T C - ReadM SNP 0004.scaffold00019 578616 1 G A - Both SNP 0004.scaffold00019 578706 1 A C scaffold24504 ReadM SNP 0004.scaffold00019 578758 1 A G - ReadM SNP 0004.scaffold00019 578955 1 T C - ReadM SNP 0004.scaffold00019 578995 1 C A - ReadM SNP 0004.scaffold00019 579020 1 G A - ReadM SNP 0004.scaffold00019 579167 1 A C - ReadM SNP 0004.scaffold00019 579169 1 T C - ReadM SNP 0004.scaffold00019 579240 1 A G - ReadM SNP 0004.scaffold00019 579252 1 A C - ReadM SNP 0004.scaffold00019 579294 1 T G - ScafM SNP 0004.scaffold00019 579424 1 T C scaffold24504 ScafM SNP 0004.scaffold00019 579447 1 T A scaffold24504 ScafM SNP 0004.scaffold00019 579452 1 T G scaffold24504 ScafM SNP 0004.scaffold00019 579460 1 C T scaffold24504 ReadM SNP 0004.scaffold00019 579568 1 C T - ReadM SNP 0004.scaffold00019 579603 1 C T - Both SNP 0004.scaffold00019 579688 1 A C scaffold24504 Both SNP 0004.scaffold00019 579738 1 C G scaffold24504 ScafM INDEL 0004.scaffold00019 579829 1 T . scaffold24504 ScafM INDEL 0004.scaffold00019 580744 1 A . scaffold6033 ScafM SNP 0004.scaffold00019 580759 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 580793 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 580801 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 580803 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 580827 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 580849 1 C T scaffold6033 Both SNP 0004.scaffold00019 580901 1 C T scaffold6033 Both SNP 0004.scaffold00019 580913 1 C T scaffold6033 Both SNP 0004.scaffold00019 580962 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 581007 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 581333 1 T G scaffold6033 ReadM SNP 0004.scaffold00019 581513 1 T C - ReadM SNP 0004.scaffold00019 581556 1 C T - ReadM SNP 0004.scaffold00019 581619 1 T G - Both SNP 0004.scaffold00019 581665 1 T A scaffold6033 Both SNP 0004.scaffold00019 581708 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 581744 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 581803 1 G A scaffold6033 Both SNP 0004.scaffold00019 581826 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 581850 1 T C scaffold6033 ReadM SNP 0004.scaffold00019 581895 1 A C - ReadM SNP 0004.scaffold00019 581939 1 C T - ReadM SNP 0004.scaffold00019 582010 1 T A - Both SNP 0004.scaffold00019 582050 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 582073 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 582085 2 TT AC scaffold6033 ReadM SNP 0004.scaffold00019 582407 1 T A - ReadM SNP 0004.scaffold00019 582426 1 G A - ReadM SNP 0004.scaffold00019 582550 1 G A - ReadM SNP 0004.scaffold00019 582760 1 G T - ReadM SNP 0004.scaffold00019 582880 1 A G - ReadM SNP 0004.scaffold00019 582937 1 G A - ReadM SNP 0004.scaffold00019 583044 1 T A - ReadM SNP 0004.scaffold00019 583074 1 T C - ReadM SNP 0004.scaffold00019 583170 1 A T - ReadM SNP 0004.scaffold00019 583174 1 T A - ReadM SNP 0004.scaffold00019 583240 1 A G - ReadM SNP 0004.scaffold00019 583288 1 C T - ReadM SNP 0004.scaffold00019 583329 1 T C - ReadM SNP 0004.scaffold00019 583433 1 C T - ReadM SNP 0004.scaffold00019 583503 1 G C - ReadM INDEL 0004.scaffold00019 583915 1 T . - ReadM SNP 0004.scaffold00019 584069 1 C T - ReadM SNP 0004.scaffold00019 584097 1 A T - ReadM SNP 0004.scaffold00019 584101 1 T A - ReadM SNP 0004.scaffold00019 584168 1 T A - ReadM SNP 0004.scaffold00019 584186 1 T A - ReadM SNP 0004.scaffold00019 584402 1 A C - ReadM SNP 0004.scaffold00019 584406 1 C T - ReadM SNP 0004.scaffold00019 584467 1 G T - ReadM SNP 0004.scaffold00019 584476 1 C T - ReadM SNP 0004.scaffold00019 584499 1 T C - ReadM SNP 0004.scaffold00019 584554 1 A G - ReadM INDEL 0004.scaffold00019 584599 1 A . - ReadM SNP 0004.scaffold00019 584719 1 A G - ReadM SNP 0004.scaffold00019 584823 1 A G - ReadM SNP 0004.scaffold00019 584847 1 T C - ReadM SNP 0004.scaffold00019 584854 1 T C - ReadM SNP 0004.scaffold00019 584948 1 T C - ReadM SNP 0004.scaffold00019 585148 1 T C - ReadM SNP 0004.scaffold00019 585162 1 C T - ReadM SNP 0004.scaffold00019 585167 1 C T - ReadM SNP 0004.scaffold00019 585293 1 C T - ReadM SNP 0004.scaffold00019 586232 1 G C - ReadM SNP 0004.scaffold00019 586242 1 A T - ReadM SNP 0004.scaffold00019 586262 1 G A - ReadM SNP 0004.scaffold00019 586306 1 G T - ReadM SNP 0004.scaffold00019 586406 1 G C - ReadM SNP 0004.scaffold00019 586458 1 T A - ReadM SNP 0004.scaffold00019 586479 1 G A - ReadM SNP 0004.scaffold00019 586575 1 A T - ReadM SNP 0004.scaffold00019 586670 1 A G - ReadM SNP 0004.scaffold00019 586716 1 G A - ReadM SNP 0004.scaffold00019 586731 1 G A - ReadM SNP 0004.scaffold00019 586779 1 A G - ReadM SNP 0004.scaffold00019 586837 1 G A - ReadM SNP 0004.scaffold00019 586890 1 A G - ReadM SNP 0004.scaffold00019 586902 1 A C - ReadM SNP 0004.scaffold00019 586959 1 G C - ReadM SNP 0004.scaffold00019 587158 1 C A - ReadM SNP 0004.scaffold00019 587164 1 A G - ReadM INDEL 0004.scaffold00019 587264 1 C . - ReadM SNP 0004.scaffold00019 587270 1 T A - ReadM SNP 0004.scaffold00019 587313 1 C T - ReadM SNP 0004.scaffold00019 587384 1 T G - ReadM SNP 0004.scaffold00019 587411 1 G T - ReadM SNP 0004.scaffold00019 587538 1 C T - ReadM SNP 0004.scaffold00019 587555 1 T C - ReadM SNP 0004.scaffold00019 587646 1 C T - ReadM SNP 0004.scaffold00019 587651 1 T C - ReadM SNP 0004.scaffold00019 587663 1 C T - ReadM SNP 0004.scaffold00019 587700 1 T A - ReadM SNP 0004.scaffold00019 587705 1 G A - ReadM SNP 0004.scaffold00019 587785 1 A C - ReadM SNP 0004.scaffold00019 587812 1 G A - ReadM SNP 0004.scaffold00019 587834 1 G A - ReadM SNP 0004.scaffold00019 587874 1 T C - ReadM SNP 0004.scaffold00019 587903 1 A G - ReadM SNP 0004.scaffold00019 588021 1 C T - ReadM SNP 0004.scaffold00019 588072 1 G T - ReadM SNP 0004.scaffold00019 588094 1 G A - ReadM SNP 0004.scaffold00019 588193 1 C G - ReadM SNP 0004.scaffold00019 588204 1 G A - ReadM SNP 0004.scaffold00019 588223 1 A G - ReadM SNP 0004.scaffold00019 588275 1 C T - ReadM SNP 0004.scaffold00019 588279 1 A G - ReadM SNP 0004.scaffold00019 588352 1 T C - ReadM SNP 0004.scaffold00019 588355 1 T G - ReadM SNP 0004.scaffold00019 588376 1 T C - ReadM SNP 0004.scaffold00019 588451 1 A G - ReadM SNP 0004.scaffold00019 588588 1 T C - ReadM SNP 0004.scaffold00019 588657 1 C T - ReadM SNP 0004.scaffold00019 588693 1 A T - ReadM SNP 0004.scaffold00019 588720 1 G T - ReadM SNP 0004.scaffold00019 588748 1 A C - ReadM SNP 0004.scaffold00019 588770 1 T G - ReadM SNP 0004.scaffold00019 588844 1 A G - ReadM SNP 0004.scaffold00019 588911 1 C A - ReadM SNP 0004.scaffold00019 588992 1 A T - ReadM SNP 0004.scaffold00019 589070 1 C T - ReadM SNP 0004.scaffold00019 589078 1 G A - ReadM SNP 0004.scaffold00019 589132 1 A G - ReadM SNP 0004.scaffold00019 589141 1 C T - ReadM SNP 0004.scaffold00019 589191 1 G A - ReadM SNP 0004.scaffold00019 589237 1 T C - ReadM SNP 0004.scaffold00019 589265 1 T C - ReadM SNP 0004.scaffold00019 589284 1 T G - ReadM SNP 0004.scaffold00019 589307 1 T C - ReadM SNP 0004.scaffold00019 589379 1 T C - ReadM SNP 0004.scaffold00019 589427 1 T A - ReadM SNP 0004.scaffold00019 589501 1 C T - ReadM SNP 0004.scaffold00019 589530 2 CT GA - ReadM SNP 0004.scaffold00019 589661 1 G C - ReadM SNP 0004.scaffold00019 589665 1 T A - ReadM SNP 0004.scaffold00019 589690 1 G T - ReadM SNP 0004.scaffold00019 589733 1 G C - ReadM SNP 0004.scaffold00019 589907 1 C A - ReadM SNP 0004.scaffold00019 589947 1 G T - ReadM SNP 0004.scaffold00019 589959 1 C T - ReadM SNP 0004.scaffold00019 590100 1 C A - ReadM SNP 0004.scaffold00019 590137 1 G A - ReadM SNP 0004.scaffold00019 590183 1 G T - ReadM SNP 0004.scaffold00019 590207 1 A C - ReadM INDEL 0004.scaffold00019 590333 1 . T - ReadM SNP 0004.scaffold00019 590353 1 A C - ReadM SNP 0004.scaffold00019 590427 1 G A - ReadM SNP 0004.scaffold00019 590472 1 G C - ReadM SNP 0004.scaffold00019 590480 1 T A - ReadM SNP 0004.scaffold00019 590573 1 T C - ReadM SNP 0004.scaffold00019 590581 1 A G - ReadM SNP 0004.scaffold00019 590649 1 G T - ReadM SNP 0004.scaffold00019 590657 1 C G - ReadM SNP 0004.scaffold00019 590863 1 G C - ReadM SNP 0004.scaffold00019 590918 1 A G - ReadM SNP 0004.scaffold00019 590976 1 T G - ReadM SNP 0004.scaffold00019 591016 1 C T - ReadM SNP 0004.scaffold00019 591034 1 C A - ReadM SNP 0004.scaffold00019 591064 1 C T - ReadM SNP 0004.scaffold00019 591100 1 A C - ReadM SNP 0004.scaffold00019 591270 1 A G - ReadM SNP 0004.scaffold00019 591301 1 A G - ReadM SNP 0004.scaffold00019 591317 1 C G - ReadM SNP 0004.scaffold00019 591371 1 T C - ReadM SNP 0004.scaffold00019 591424 1 A G - ReadM SNP 0004.scaffold00019 591446 1 C A - ReadM SNP 0004.scaffold00019 591545 1 G C - ReadM SNP 0004.scaffold00019 591585 1 C T - ReadM SNP 0004.scaffold00019 591610 1 C T - ScafM SNP 0004.scaffold00019 596421 1 T C scaffold22 ScafM SNP 0004.scaffold00019 596433 1 C G scaffold22 ScafM SNP 0004.scaffold00019 596435 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596474 1 A T scaffold22 ScafM INDEL 0004.scaffold00019 596477 1 G . scaffold22 ScafM INDEL 0004.scaffold00019 596484 4 CATT ...G scaffold22 ScafM SNP 0004.scaffold00019 596490 1 A C scaffold22 ScafM INDEL 0004.scaffold00019 596493 2 TG .. scaffold22 ScafM INDEL 0004.scaffold00019 596497 2 .T CA scaffold22 ScafM SNP 0004.scaffold00019 596500 2 TA AG scaffold22 ScafM SNP 0004.scaffold00019 596515 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596519 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596531 1 T C scaffold22 ScafM INDEL 0004.scaffold00019 596532 2 .G AC scaffold22 ScafM SNP 0004.scaffold00019 596537 3 ATC GCT scaffold22 ScafM SNP 0004.scaffold00019 596551 1 C G scaffold22 ScafM SNP 0004.scaffold00019 596556 1 T C scaffold22 ScafM SNP 0004.scaffold00019 596561 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596567 1 T G scaffold22 ScafM SNP 0004.scaffold00019 596570 2 CG TA scaffold22 ScafM SNP 0004.scaffold00019 596581 1 A T scaffold22 ScafM SNP 0004.scaffold00019 596589 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596592 1 C T scaffold22 ScafM SNP 0004.scaffold00019 596594 1 A G scaffold22 ScafM SNP 0004.scaffold00019 596607 1 T C scaffold22 ScafM SNP 0004.scaffold00019 596611 1 G T scaffold22 ScafM SNP 0004.scaffold00019 596614 2 GT CC scaffold22 ScafM SNP 0004.scaffold00019 596618 1 T C scaffold22 ScafM SNP 0004.scaffold00019 596624 2 AA GC scaffold22 ReadM SNP 0004.scaffold00019 597001 1 A G - ReadM SNP 0004.scaffold00019 597021 1 C T - ReadM SNP 0004.scaffold00019 597110 1 A C - ReadM SNP 0004.scaffold00019 597197 1 G A - ReadM SNP 0004.scaffold00019 597418 1 C T - ReadM SNP 0004.scaffold00019 597471 1 T A - ReadM SNP 0004.scaffold00019 597544 1 G C - ReadM SNP 0004.scaffold00019 597573 1 C A - ReadM SNP 0004.scaffold00019 597610 1 A G - ReadM SNP 0004.scaffold00019 597686 2 GC AA - Both SNP 0004.scaffold00019 597773 1 A G scaffold6033 Both SNP 0004.scaffold00019 597794 1 A G scaffold6033 Both SNP 0004.scaffold00019 597801 1 T A scaffold6033 Both SNP 0004.scaffold00019 597885 1 A G scaffold6033 Both SNP 0004.scaffold00019 597926 1 G A scaffold6033 Both SNP 0004.scaffold00019 598261 1 A T scaffold6033 Both SNP 0004.scaffold00019 598313 1 T A scaffold6033 Both SNP 0004.scaffold00019 598349 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 598359 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 598369 1 C A scaffold6033 ScafM INDEL 0004.scaffold00019 598439 1 . A scaffold6033 ScafM SNP 0004.scaffold00019 598443 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 598534 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 598541 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 598545 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 598576 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 598632 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 598647 1 A T scaffold6033 ScafM INDEL 0004.scaffold00019 598674 3 AAA ... scaffold6033 ScafM SNP 0004.scaffold00019 598785 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 598801 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 598805 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 598840 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 598870 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 598879 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 598903 1 G C scaffold6033 ScafM SNP 0004.scaffold00019 598918 1 A G scaffold6033 Both SNP 0004.scaffold00019 598937 1 C T scaffold6033 Both SNP 0004.scaffold00019 598956 1 A C scaffold6033 Both SNP 0004.scaffold00019 598982 1 A G scaffold6033 Both SNP 0004.scaffold00019 599025 1 G A scaffold6033 Both SNP 0004.scaffold00019 599049 1 G T scaffold6033 Both SNP 0004.scaffold00019 599080 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 599084 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 599113 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 599152 1 C T scaffold6033 Both SNP 0004.scaffold00019 599164 1 G A scaffold6033 Both SNP 0004.scaffold00019 599215 1 C T scaffold6033 Both SNP 0004.scaffold00019 599226 1 A G scaffold6033 Both SNP 0004.scaffold00019 599317 1 A G scaffold6033 Both INDEL 0004.scaffold00019 599321 2 .. GA scaffold6033 ReadM SNP 0004.scaffold00019 599509 1 G A - ReadM SNP 0004.scaffold00019 599528 1 A C - ReadM SNP 0004.scaffold00019 599540 1 C T - ScafM SNP 0004.scaffold00019 599593 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 599595 1 G A scaffold6033 Both SNP 0004.scaffold00019 599615 1 A C scaffold6033 Both SNP 0004.scaffold00019 599649 1 T A scaffold6033 Both SNP 0004.scaffold00019 599667 1 A C scaffold6033 Both SNP 0004.scaffold00019 599751 1 C A scaffold6033 Both SNP 0004.scaffold00019 599811 1 G T scaffold6033 Both SNP 0004.scaffold00019 599815 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 599855 2 AA GG scaffold6033 ScafM SNP 0004.scaffold00019 599872 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 599921 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 599926 2 TT AC scaffold6033 ScafM SNP 0004.scaffold00019 599984 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 600043 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 600078 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 600080 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 600084 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 600091 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 600210 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 600277 1 G T scaffold6033 ReadM SNP 0004.scaffold00019 601651 1 G A - ReadM SNP 0004.scaffold00019 602168 1 G A - ReadM SNP 0004.scaffold00019 602185 1 G A - ReadM SNP 0004.scaffold00019 602196 1 T A - ReadM SNP 0004.scaffold00019 602711 1 C T - ReadM SNP 0004.scaffold00019 602770 1 C T - ReadM SNP 0004.scaffold00019 603161 1 C T - ScafM SNP 0004.scaffold00019 603389 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 603415 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 603443 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 603451 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 603475 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 603513 2 GC AA scaffold6033 ScafM INDEL 0004.scaffold00019 603520 3 TTG ... scaffold6033 ScafM INDEL 0004.scaffold00019 603555 4 TATA .... scaffold6033 ScafM SNP 0004.scaffold00019 603634 1 G C scaffold6033 ScafM SNP 0004.scaffold00019 603940 1 A G scaffold2272 ScafM INDEL 0004.scaffold00019 603943 3 ... AAT scaffold2272 ScafM SNP 0004.scaffold00019 603993 1 T A scaffold2272 ScafM SNP 0004.scaffold00019 604020 1 A G scaffold2272 ScafM SNP 0004.scaffold00019 604085 1 G T scaffold2272 ScafM SNP 0004.scaffold00019 604093 1 G A scaffold2272 ScafM INDEL 0004.scaffold00019 604327 2 .. AA scaffold28993 ScafM SNP 0004.scaffold00019 604351 1 T G scaffold28993 ScafM SNP 0004.scaffold00019 604366 1 T G scaffold28993 ScafM SNP 0004.scaffold00019 604407 1 T C scaffold28993 ScafM SNP 0004.scaffold00019 604430 1 G A scaffold28993 ScafM SNP 0004.scaffold00019 604439 1 C T scaffold28993 ScafM SNP 0004.scaffold00019 604456 1 T A scaffold28993 ScafM SNP 0004.scaffold00019 604502 1 A C scaffold28993 ScafM SNP 0004.scaffold00019 604531 1 C T scaffold28993 ScafM SNP 0004.scaffold00019 604550 1 C A scaffold28993 ScafM SNP 0004.scaffold00019 604558 1 A G scaffold28993 ScafM SNP 0004.scaffold00019 604595 1 A T scaffold28993 ScafM SNP 0004.scaffold00019 604602 1 G A scaffold28993 ScafM SNP 0004.scaffold00019 604633 2 GT AG scaffold28993 ScafM SNP 0004.scaffold00019 604650 1 T G scaffold28993 ScafM SNP 0004.scaffold00019 604665 1 T A scaffold28993 ReadM SNP 0004.scaffold00019 605357 1 G A - ReadM SNP 0004.scaffold00019 605386 1 G C - ReadM SNP 0004.scaffold00019 605573 1 T G - ReadM SNP 0004.scaffold00019 605607 1 A G - ReadM SNP 0004.scaffold00019 605660 1 G A - ReadM SNP 0004.scaffold00019 605678 1 A G - ReadM SNP 0004.scaffold00019 605729 1 C T - ReadM SNP 0004.scaffold00019 605759 1 C A - ReadM SNP 0004.scaffold00019 605781 1 T C - ReadM INDEL 0004.scaffold00019 605840 3 ... TTC - ReadM SNP 0004.scaffold00019 605977 1 A G - ReadM SNP 0004.scaffold00019 606000 1 A T - ReadM SNP 0004.scaffold00019 606108 1 C A - ReadM SNP 0004.scaffold00019 606200 1 T C - ReadM SNP 0004.scaffold00019 606223 1 T C - ReadM SNP 0004.scaffold00019 606295 1 C T - ReadM SNP 0004.scaffold00019 606341 1 G A - ReadM SNP 0004.scaffold00019 606389 1 T G - ReadM SNP 0004.scaffold00019 606479 1 T C - ReadM SNP 0004.scaffold00019 606516 1 T C - ReadM SNP 0004.scaffold00019 606571 1 G A - ReadM SNP 0004.scaffold00019 606591 1 T C - ReadM INDEL 0004.scaffold00019 606697 2 TT .. - ReadM SNP 0004.scaffold00019 606758 1 A T - ReadM SNP 0004.scaffold00019 606762 1 T A - ReadM SNP 0004.scaffold00019 606791 1 T C - ReadM SNP 0004.scaffold00019 606853 1 T A - ReadM SNP 0004.scaffold00019 606922 1 G A - ReadM SNP 0004.scaffold00019 606975 1 A C - ReadM SNP 0004.scaffold00019 607015 1 C A - ReadM SNP 0004.scaffold00019 607106 1 T C - ReadM SNP 0004.scaffold00019 607234 1 G T - ReadM SNP 0004.scaffold00019 607255 1 C T - ReadM SNP 0004.scaffold00019 607261 1 A G - ReadM SNP 0004.scaffold00019 607333 1 T C - ReadM SNP 0004.scaffold00019 607436 1 A G - ReadM SNP 0004.scaffold00019 607460 1 A T - ReadM SNP 0004.scaffold00019 607493 1 A C - ReadM SNP 0004.scaffold00019 607581 1 G A - ReadM SNP 0004.scaffold00019 607670 1 T C - ReadM SNP 0004.scaffold00019 607679 1 T C - ReadM SNP 0004.scaffold00019 608646 1 T G - ReadM SNP 0004.scaffold00019 608809 1 A T - ReadM SNP 0004.scaffold00019 608814 1 G A - ReadM SNP 0004.scaffold00019 608858 1 T C - ReadM SNP 0004.scaffold00019 609120 1 G A - ReadM INDEL 0004.scaffold00019 610099 1 T . - ReadM SNP 0004.scaffold00019 610228 1 G T - Both SNP 0004.scaffold00019 610338 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 610360 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 610370 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 610381 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 610397 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 610399 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 610406 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 610457 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 610460 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 610464 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 610476 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 610539 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 610599 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 610602 1 G C scaffold6033 ScafM SNP 0004.scaffold00019 610618 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 610625 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 610644 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 610742 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 610778 1 C G scaffold6033 ScafM SNP 0004.scaffold00019 610817 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 610854 1 C G scaffold6033 ScafM SNP 0004.scaffold00019 614612 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 614727 2 TG AA scaffold6033 ReadM SNP 0004.scaffold00019 615200 1 C T - ReadM SNP 0004.scaffold00019 615229 1 G T - ReadM SNP 0004.scaffold00019 615319 1 G A - ReadM SNP 0004.scaffold00019 615851 1 A G - ReadM SNP 0004.scaffold00019 615870 1 T C - ReadM SNP 0004.scaffold00019 616231 1 G A - ReadM SNP 0004.scaffold00019 616321 1 A C - ReadM SNP 0004.scaffold00019 616324 1 C A - ReadM SNP 0004.scaffold00019 616375 1 C A - ReadM SNP 0004.scaffold00019 616661 1 A G - ReadM SNP 0004.scaffold00019 616665 1 C A - ReadM SNP 0004.scaffold00019 616696 1 G A - ReadM SNP 0004.scaffold00019 616813 1 G A - ReadM SNP 0004.scaffold00019 616904 1 G T - ReadM INDEL 0004.scaffold00019 616946 1 C . - ReadM SNP 0004.scaffold00019 616951 1 A G - ReadM SNP 0004.scaffold00019 616968 1 T C - ReadM INDEL 0004.scaffold00019 617025 1 A . - ReadM SNP 0004.scaffold00019 617101 1 G C - ReadM INDEL 0004.scaffold00019 617760 1 . A - ReadM INDEL 0004.scaffold00019 618169 1 . T - ReadM SNP 0004.scaffold00019 618237 1 A G - ReadM SNP 0004.scaffold00019 618781 1 T C - ReadM SNP 0004.scaffold00019 618854 1 T C - ReadM INDEL 0004.scaffold00019 619021 1 C . - ReadM SNP 0004.scaffold00019 619031 1 C T - ReadM SNP 0004.scaffold00019 619085 1 T A - ReadM SNP 0004.scaffold00019 619100 1 T C - ReadM SNP 0004.scaffold00019 619118 1 A G - ReadM SNP 0004.scaffold00019 619142 1 A T - ReadM SNP 0004.scaffold00019 622025 1 T C - ReadM SNP 0004.scaffold00019 622186 1 A G - ReadM SNP 0004.scaffold00019 622235 1 G C - ReadM SNP 0004.scaffold00019 622246 1 C T - ReadM SNP 0004.scaffold00019 622562 1 A T - ReadM SNP 0004.scaffold00019 623039 1 G T - ReadM SNP 0004.scaffold00019 623072 1 G T - ReadM SNP 0004.scaffold00019 623122 1 C A - ReadM SNP 0004.scaffold00019 623216 1 A C - ReadM SNP 0004.scaffold00019 623230 1 C A - ReadM SNP 0004.scaffold00019 623290 1 G C - ReadM SNP 0004.scaffold00019 623346 1 T A - ReadM SNP 0004.scaffold00019 623565 1 T C - ReadM SNP 0004.scaffold00019 623627 1 T C - ReadM SNP 0004.scaffold00019 623641 1 A G - ReadM SNP 0004.scaffold00019 623706 1 T C - ReadM SNP 0004.scaffold00019 623718 1 G A - ReadM SNP 0004.scaffold00019 623953 1 C T - ReadM SNP 0004.scaffold00019 623995 1 G T - ReadM INDEL 0004.scaffold00019 624037 1 . C - ReadM SNP 0004.scaffold00019 624068 1 A G - ReadM SNP 0004.scaffold00019 624094 1 T C - ReadM SNP 0004.scaffold00019 624144 1 A T - ReadM SNP 0004.scaffold00019 624165 1 G A - ReadM SNP 0004.scaffold00019 624180 1 G A - ReadM SNP 0004.scaffold00019 624264 1 T C - ReadM SNP 0004.scaffold00019 624309 1 A G - ReadM SNP 0004.scaffold00019 624376 2 CG TA - ReadM SNP 0004.scaffold00019 624383 1 G C - ReadM SNP 0004.scaffold00019 624461 1 G A - ReadM SNP 0004.scaffold00019 624474 1 C G - ReadM SNP 0004.scaffold00019 624490 1 C T - ReadM SNP 0004.scaffold00019 624508 1 A G - ReadM SNP 0004.scaffold00019 624512 1 T G - ReadM SNP 0004.scaffold00019 624642 1 A G - ReadM SNP 0004.scaffold00019 624658 1 T C - ReadM SNP 0004.scaffold00019 624735 1 G A - ReadM SNP 0004.scaffold00019 624775 1 G T - ReadM SNP 0004.scaffold00019 624781 1 T C - ReadM SNP 0004.scaffold00019 624818 1 T C - ReadM SNP 0004.scaffold00019 625062 1 A G - ReadM SNP 0004.scaffold00019 625064 1 C T - ScafM SNP 0004.scaffold00019 625152 1 G A scaffold6033 Both SNP 0004.scaffold00019 625222 1 G A scaffold6033 Both SNP 0004.scaffold00019 625230 1 C T scaffold6033 Both SNP 0004.scaffold00019 625322 1 T C scaffold6033 Both INDEL 0004.scaffold00019 625507 1 G . scaffold6033 Both SNP 0004.scaffold00019 625604 1 C T scaffold6033 Both SNP 0004.scaffold00019 625624 1 G C scaffold6033 Both SNP 0004.scaffold00019 625661 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 625771 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 625800 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 625810 1 A G scaffold6033 Both SNP 0004.scaffold00019 625895 1 T A scaffold6033 ScafM INDEL 0004.scaffold00019 625915 1 T . scaffold6033 ScafM SNP 0004.scaffold00019 625917 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 625933 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 625993 2 AA GC scaffold6033 Both SNP 0004.scaffold00019 626049 1 G A scaffold6033 Both SNP 0004.scaffold00019 626079 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 626186 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 626226 1 A T scaffold6033 ScafM INDEL 0004.scaffold00019 626239 3 ... AAT scaffold6033 ScafM SNP 0004.scaffold00019 626254 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 626257 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 626303 1 A G scaffold6033 ReadM SNP 0004.scaffold00019 626557 1 T C - ReadM SNP 0004.scaffold00019 626665 1 A G - ReadM SNP 0004.scaffold00019 626804 1 A G - ReadM SNP 0004.scaffold00019 626917 1 C T - ReadM SNP 0004.scaffold00019 626953 1 G A - ReadM SNP 0004.scaffold00019 626995 1 T C - ReadM SNP 0004.scaffold00019 627039 1 A T - ReadM SNP 0004.scaffold00019 627231 1 G A - ReadM SNP 0004.scaffold00019 627373 1 C T - ReadM SNP 0004.scaffold00019 627414 1 T G - ReadM SNP 0004.scaffold00019 627419 1 C T - ReadM SNP 0004.scaffold00019 627431 1 A G - ReadM SNP 0004.scaffold00019 627543 1 C A - ReadM SNP 0004.scaffold00019 627557 1 A C - ReadM SNP 0004.scaffold00019 627563 1 T G - ReadM SNP 0004.scaffold00019 627634 1 G C - ReadM INDEL 0004.scaffold00019 627764 1 A . - ReadM SNP 0004.scaffold00019 629868 1 T C - ReadM SNP 0004.scaffold00019 629870 1 G A - ScafM SNP 0004.scaffold00019 629978 1 C T scaffold6033 Both SNP 0004.scaffold00019 630103 1 G A scaffold6033 ScafM INDEL 0004.scaffold00019 630134 9 TTTGAGCAA ......... scaffold6033 Both SNP 0004.scaffold00019 630239 1 G T scaffold6033 Both SNP 0004.scaffold00019 630302 1 A G scaffold6033 Both SNP 0004.scaffold00019 630311 1 C T scaffold6033 Both SNP 0004.scaffold00019 630383 1 T G scaffold6033 Both SNP 0004.scaffold00019 630401 1 A G scaffold6033 ReadM SNP 0004.scaffold00019 630599 1 A G - ReadM SNP 0004.scaffold00019 630622 1 C T - ReadM SNP 0004.scaffold00019 630644 1 G C - ReadM SNP 0004.scaffold00019 630658 1 T G - ReadM SNP 0004.scaffold00019 631164 1 C T - ReadM SNP 0004.scaffold00019 631181 1 G A - ReadM SNP 0004.scaffold00019 631289 1 G T - ReadM SNP 0004.scaffold00019 631313 1 A T - ReadM SNP 0004.scaffold00019 631720 1 T G - ReadM SNP 0004.scaffold00019 631751 1 T A - ReadM SNP 0004.scaffold00019 631880 1 A C - ReadM SNP 0004.scaffold00019 632115 1 G T - ReadM SNP 0004.scaffold00019 632725 1 A G - ReadM SNP 0004.scaffold00019 632769 1 T G - ReadM SNP 0004.scaffold00019 632861 1 T G - ReadM SNP 0004.scaffold00019 632899 1 C A - Both SNP 0004.scaffold00019 632969 1 T C scaffold6033 Both SNP 0004.scaffold00019 632992 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 633004 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 633017 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 633024 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 633029 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 633041 1 A C scaffold6033 Both SNP 0004.scaffold00019 633055 1 C T scaffold6033 Both SNP 0004.scaffold00019 633090 1 T C scaffold6033 Both SNP 0004.scaffold00019 633185 1 T C scaffold6033 Both SNP 0004.scaffold00019 633227 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 633257 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 633262 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 633274 1 G C scaffold6033 ScafM SNP 0004.scaffold00019 633329 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 633342 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 633347 2 CC TT scaffold6033 ScafM SNP 0004.scaffold00019 633404 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 633415 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 633417 1 A G scaffold6033 Both SNP 0004.scaffold00019 633430 1 C T scaffold6033 Both SNP 0004.scaffold00019 633452 1 G C scaffold6033 Both SNP 0004.scaffold00019 633553 1 G C scaffold6033 Both SNP 0004.scaffold00019 633614 1 G C scaffold6033 Both SNP 0004.scaffold00019 633616 1 A C scaffold6033 ScafM SNP 0004.scaffold00019 633642 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 633653 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 633665 1 T G scaffold6033 ScafM INDEL 0004.scaffold00019 633672 5 ..... TCAGC scaffold6033 Both SNP 0004.scaffold00019 633844 1 T C scaffold6033 Both SNP 0004.scaffold00019 633932 1 A G scaffold6033 Both SNP 0004.scaffold00019 633971 1 C T scaffold6033 Both SNP 0004.scaffold00019 634035 1 G A scaffold6033 Both SNP 0004.scaffold00019 634041 1 T C scaffold6033 Both SNP 0004.scaffold00019 634115 1 C G scaffold6033 Both SNP 0004.scaffold00019 634124 1 A G scaffold6033 Both SNP 0004.scaffold00019 634197 1 T G scaffold6033 Both SNP 0004.scaffold00019 634210 1 T A scaffold6033 Both SNP 0004.scaffold00019 634223 1 G C scaffold6033 Both SNP 0004.scaffold00019 634244 1 A G scaffold6033 Both SNP 0004.scaffold00019 634253 1 A G scaffold6033 Both SNP 0004.scaffold00019 634293 1 G A scaffold6033 Both INDEL 0004.scaffold00019 634409 2 .. AA scaffold6033 Both SNP 0004.scaffold00019 634429 1 A T scaffold6033 Both SNP 0004.scaffold00019 634450 1 A T scaffold6033 Both SNP 0004.scaffold00019 634556 1 A T scaffold6033 Both SNP 0004.scaffold00019 634606 1 G A scaffold6033 Both SNP 0004.scaffold00019 634635 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 634645 1 G C scaffold6033 ScafM SNP 0004.scaffold00019 634665 1 T C scaffold6033 Both SNP 0004.scaffold00019 634704 1 G C scaffold6033 Both SNP 0004.scaffold00019 634729 1 T G scaffold6033 Both SNP 0004.scaffold00019 634762 1 T C scaffold6033 Both SNP 0004.scaffold00019 635070 1 T C scaffold6033 Both SNP 0004.scaffold00019 635139 1 C G scaffold6033 ReadM SNP 0004.scaffold00019 635204 1 T C - ReadM SNP 0004.scaffold00019 635208 1 A T - ReadM SNP 0004.scaffold00019 635379 1 G T - ReadM SNP 0004.scaffold00019 635398 1 T A - Both SNP 0004.scaffold00019 635482 1 C T scaffold6033 Both SNP 0004.scaffold00019 635525 1 C G scaffold6033 ScafM SNP 0004.scaffold00019 635717 1 T C scaffold6033 ScafM INDEL 0004.scaffold00019 635755 40 ........................................ TAATAGTTAACATGCTCACCTACTATAAATATTGCTTCAT scaffold6033 ScafM SNP 0004.scaffold00019 635774 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 635789 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 635803 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 635857 1 C T scaffold6033 ScafM SNP 0004.scaffold00019 635872 1 T G scaffold6033 ScafM INDEL 0004.scaffold00019 635918 9 ......... TCAACAATA scaffold6033 ScafM SNP 0004.scaffold00019 635999 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 636013 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 636140 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 636178 1 A G scaffold6033 ScafM SNP 0004.scaffold00019 636204 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 636241 1 G A scaffold6033 ScafM SNP 0004.scaffold00019 636332 1 T G scaffold6033 ScafM SNP 0004.scaffold00019 636355 1 C A scaffold6033 ScafM INDEL 0004.scaffold00019 636362 1 A . scaffold6033 ScafM SNP 0004.scaffold00019 636424 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 636435 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 636445 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 636473 1 G T scaffold6033 ScafM SNP 0004.scaffold00019 636510 1 T A scaffold6033 ScafM SNP 0004.scaffold00019 636534 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 636595 1 C A scaffold6033 ScafM SNP 0004.scaffold00019 636798 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 636870 1 A T scaffold6033 ScafM SNP 0004.scaffold00019 636893 1 T C scaffold6033 ScafM SNP 0004.scaffold00019 636916 1 A C scaffold6033 ReadM SNP 0004.scaffold00019 640194 1 G A - ReadM SNP 0004.scaffold00019 640225 1 G A - ReadM SNP 0004.scaffold00019 640548 1 A G - ReadM SNP 0004.scaffold00019 640590 1 G A - ReadM SNP 0004.scaffold00019 640601 1 C T - ReadM SNP 0004.scaffold00019 640662 1 G T - ReadM SNP 0004.scaffold00019 640733 1 C T - ReadM SNP 0004.scaffold00019 640739 1 G A - ReadM SNP 0004.scaffold00019 640758 1 C T - ReadM SNP 0004.scaffold00019 641184 1 T C - ReadM SNP 0004.scaffold00019 644209 1 G A - ReadM SNP 0004.scaffold00019 644238 1 A G - ReadM SNP 0004.scaffold00019 644624 1 A C - ReadM SNP 0004.scaffold00019 653070 1 A T - ReadM SNP 0004.scaffold00019 653124 1 A T - ReadM SNP 0004.scaffold00019 653142 1 G T - ReadM SNP 0004.scaffold00019 653228 1 T C - ReadM SNP 0004.scaffold00019 653471 1 A T - ReadM SNP 0004.scaffold00019 653590 1 G C - ReadM SNP 0004.scaffold00019 653661 1 C T - ReadM SNP 0004.scaffold00019 653905 1 G A - ReadM SNP 0004.scaffold00019 653921 1 A G - ReadM SNP 0004.scaffold00019 654891 1 T A - ReadM SNP 0004.scaffold00019 655076 1 T C - ReadM SNP 0004.scaffold00019 655114 1 G T - ReadM SNP 0004.scaffold00019 655153 1 C T - ReadM SNP 0004.scaffold00019 655231 1 T C - ReadM SNP 0004.scaffold00019 655363 1 A C - ReadM SNP 0004.scaffold00019 655368 1 G C - ReadM SNP 0004.scaffold00019 655502 1 C T - ReadM SNP 0004.scaffold00019 655557 1 G A - ReadM SNP 0004.scaffold00019 655620 1 G C - ReadM SNP 0004.scaffold00019 655974 1 A G - ReadM SNP 0004.scaffold00019 656000 1 A T - ReadM SNP 0004.scaffold00019 656002 1 A C - ReadM SNP 0004.scaffold00019 656053 1 T G - ReadM SNP 0004.scaffold00019 656095 1 T C - ReadM SNP 0004.scaffold00019 656171 1 A C - ReadM SNP 0004.scaffold00019 656176 1 T C - ReadM SNP 0004.scaffold00019 656249 1 A G - ReadM SNP 0004.scaffold00019 656459 1 A T - ReadM SNP 0004.scaffold00019 656541 1 C G - ReadM SNP 0004.scaffold00019 656544 1 A G - ReadM SNP 0004.scaffold00019 656646 1 A G - ReadM SNP 0004.scaffold00019 656756 1 C G - ReadM SNP 0004.scaffold00019 656952 1 T C - ReadM SNP 0004.scaffold00019 656998 1 G A - ReadM SNP 0004.scaffold00019 657005 1 G C - ReadM SNP 0004.scaffold00019 657320 1 A G - ReadM SNP 0004.scaffold00019 657479 1 G C - ReadM SNP 0004.scaffold00019 657595 1 T G - ReadM SNP 0004.scaffold00019 657616 1 C T - ReadM SNP 0004.scaffold00019 657663 1 C A - ReadM SNP 0004.scaffold00019 657689 1 C T - ReadM SNP 0004.scaffold00019 657726 1 A G - ReadM SNP 0004.scaffold00019 657817 1 A G - ReadM SNP 0004.scaffold00019 657867 1 C T - ReadM SNP 0004.scaffold00019 657911 1 A G - ReadM SNP 0004.scaffold00019 657941 1 C T - ReadM SNP 0004.scaffold00019 657984 1 A T - ReadM SNP 0004.scaffold00019 658026 1 T A - ReadM SNP 0004.scaffold00019 658050 1 A T - ReadM SNP 0004.scaffold00019 658074 1 T G - ReadM SNP 0004.scaffold00019 658194 1 A G - ReadM SNP 0004.scaffold00019 658213 1 C G - ReadM SNP 0004.scaffold00019 658388 1 G A - ReadM SNP 0004.scaffold00019 658477 1 A G - ReadM SNP 0004.scaffold00019 658544 1 G T - ReadM SNP 0004.scaffold00019 658584 1 C T - ReadM SNP 0004.scaffold00019 658620 1 C T - ReadM INDEL 0004.scaffold00019 658740 1 . A - ReadM SNP 0004.scaffold00019 658871 1 A G - ReadM SNP 0004.scaffold00019 658897 1 A C - ReadM SNP 0004.scaffold00019 658912 1 C A - ReadM SNP 0004.scaffold00019 659098 1 A G - ReadM SNP 0004.scaffold00019 659197 1 A T - ReadM SNP 0004.scaffold00019 659250 1 T G - ReadM SNP 0004.scaffold00019 659291 1 G A - ReadM SNP 0004.scaffold00019 659350 1 T C - ReadM SNP 0004.scaffold00019 659426 1 C T - ReadM SNP 0004.scaffold00019 659443 1 T C - ReadM SNP 0004.scaffold00019 659533 1 A G - ReadM SNP 0004.scaffold00019 659550 1 A G - ReadM SNP 0004.scaffold00019 659709 1 G A - ReadM SNP 0004.scaffold00019 659800 1 T C - ReadM SNP 0004.scaffold00019 659803 1 A G - ReadM SNP 0004.scaffold00019 659911 1 C G - ReadM SNP 0004.scaffold00019 659940 1 A G - ReadM INDEL 0004.scaffold00019 660169 1 . T - ReadM SNP 0004.scaffold00019 660177 1 C T - ReadM SNP 0004.scaffold00019 660298 1 G C - ReadM INDEL 0004.scaffold00019 660311 1 . A - ReadM SNP 0004.scaffold00019 660369 1 C T - Both SNP 0004.scaffold00019 660573 1 C T scaffold10241 Both SNP 0004.scaffold00019 660610 1 T C scaffold10241 Both SNP 0004.scaffold00019 660648 1 T G scaffold10241 Both SNP 0004.scaffold00019 660701 1 C T scaffold10241 Both SNP 0004.scaffold00019 660720 1 G A scaffold10241 ScafM SNP 0004.scaffold00019 660781 1 C T scaffold10241 Both SNP 0004.scaffold00019 660840 1 G A scaffold10241 ReadM SNP 0004.scaffold00019 660922 1 G A - ReadM SNP 0004.scaffold00019 661010 1 T C - ReadM SNP 0004.scaffold00019 661021 1 A G - ReadM SNP 0004.scaffold00019 661031 1 T C - ReadM SNP 0004.scaffold00019 661086 1 T C - ReadM SNP 0004.scaffold00019 661225 1 T C - ReadM SNP 0004.scaffold00019 661372 1 A T - ReadM SNP 0004.scaffold00019 661402 1 A T - ReadM SNP 0004.scaffold00019 661486 1 A G - ReadM SNP 0004.scaffold00019 661538 1 C T - ReadM SNP 0004.scaffold00019 661832 1 T A - ReadM SNP 0004.scaffold00019 661864 1 G A - ReadM SNP 0004.scaffold00019 661974 1 T C - ReadM SNP 0004.scaffold00019 662050 1 C T - ReadM SNP 0004.scaffold00019 662108 1 C G - ReadM SNP 0004.scaffold00019 662119 1 G T - ReadM SNP 0004.scaffold00019 662351 1 T C - ReadM SNP 0004.scaffold00019 662376 1 G A - ReadM SNP 0004.scaffold00019 662396 1 G A - ReadM SNP 0004.scaffold00019 662461 1 G T - ReadM SNP 0004.scaffold00019 662479 1 C T - ReadM INDEL 0004.scaffold00019 662553 1 . G - ReadM SNP 0004.scaffold00019 662573 1 T C - ReadM SNP 0004.scaffold00019 662667 1 G T - ReadM SNP 0004.scaffold00019 662682 1 C T - ReadM SNP 0004.scaffold00019 662723 1 C T - ReadM SNP 0004.scaffold00019 662791 1 G T - ReadM SNP 0004.scaffold00019 662993 1 T A - ReadM SNP 0004.scaffold00019 663064 1 A G - Both SNP 0004.scaffold00019 663219 1 T C scaffold10241 ReadM INDEL 0004.scaffold00019 663234 2 .. AT - ReadM SNP 0004.scaffold00019 663268 1 A T - ReadM SNP 0004.scaffold00019 663289 1 A C - ReadM SNP 0004.scaffold00019 663368 1 G T - ReadM SNP 0004.scaffold00019 663374 1 G T - ReadM SNP 0004.scaffold00019 663426 1 T G - ReadM SNP 0004.scaffold00019 663470 1 C T - Both SNP 0004.scaffold00019 663489 1 C A scaffold10241 Both SNP 0004.scaffold00019 663537 1 C T scaffold10241 Both SNP 0004.scaffold00019 663649 1 A T scaffold10241 ScafM INDEL 0004.scaffold00019 663681 3 GAA ... scaffold10241 ScafM SNP 0004.scaffold00019 663740 2 AG CA scaffold10241 ScafM SNP 0004.scaffold00019 663772 1 A T scaffold10241 Both SNP 0004.scaffold00019 663807 1 G A scaffold10241 Both INDEL 0004.scaffold00019 663840 2 .. GA scaffold10241 ScafM SNP 0004.scaffold00019 663974 1 G A scaffold29063 ScafM SNP 0004.scaffold00019 663999 1 C T scaffold29063 ScafM SNP 0004.scaffold00019 664004 1 T G scaffold29063 ReadM SNP 0004.scaffold00019 664009 1 T C - ScafM INDEL 0004.scaffold00019 664014 4 .... ATGT scaffold29063 ScafM SNP 0004.scaffold00019 664025 1 C G scaffold29063 ReadM SNP 0004.scaffold00019 664104 1 A G - Both SNP 0004.scaffold00019 664130 1 G A scaffold8442 ScafM SNP 0004.scaffold00019 664134 1 G A scaffold8442 ScafM SNP 0004.scaffold00019 664139 1 T C scaffold8442 ScafM SNP 0004.scaffold00019 664168 1 G C scaffold8442 ReadM SNP 0004.scaffold00019 664208 1 T A - ScafM SNP 0004.scaffold00019 664210 1 T C scaffold8442 ScafM INDEL 0004.scaffold00019 664249 1 G . scaffold8442 ReadM SNP 0004.scaffold00019 664314 1 A G - ReadM SNP 0004.scaffold00019 664378 1 T A - ReadM SNP 0004.scaffold00019 664534 1 G T - ReadM SNP 0004.scaffold00019 664547 1 A G - ReadM SNP 0004.scaffold00019 664551 1 T C - ReadM SNP 0004.scaffold00019 664719 1 C T - ReadM SNP 0004.scaffold00019 664792 1 T C - ReadM SNP 0004.scaffold00019 664818 1 A G - ReadM SNP 0004.scaffold00019 664885 1 A G - ReadM SNP 0004.scaffold00019 665224 1 A G - ReadM SNP 0004.scaffold00019 665242 1 T G - ReadM SNP 0004.scaffold00019 665362 1 G A - ReadM SNP 0004.scaffold00019 665564 1 G T - ReadM SNP 0004.scaffold00019 665589 1 T C - ReadM SNP 0004.scaffold00019 665836 1 T C - ReadM SNP 0004.scaffold00019 665843 1 G A - ReadM SNP 0004.scaffold00019 665850 1 G A - ReadM SNP 0004.scaffold00019 665877 1 A G - ReadM SNP 0004.scaffold00019 665915 1 C T - ReadM SNP 0004.scaffold00019 665959 1 G C - ReadM SNP 0004.scaffold00019 665985 1 G T - ReadM SNP 0004.scaffold00019 666026 1 C T - ReadM SNP 0004.scaffold00019 666106 1 C T - ReadM SNP 0004.scaffold00019 666180 1 A G - ReadM SNP 0004.scaffold00019 666425 1 C T - ReadM SNP 0004.scaffold00019 666456 1 A T - ReadM SNP 0004.scaffold00019 666531 1 T G - ReadM SNP 0004.scaffold00019 666698 1 T G - ReadM SNP 0004.scaffold00019 666708 1 T G - ReadM SNP 0004.scaffold00019 667741 1 C A - ReadM SNP 0004.scaffold00019 667810 1 G A - ReadM SNP 0004.scaffold00019 668166 1 G A - ReadM SNP 0004.scaffold00019 668249 1 T G - ReadM SNP 0004.scaffold00019 670601 1 A G - ReadM SNP 0004.scaffold00019 670624 1 G A - ReadM SNP 0004.scaffold00019 670631 1 G A - ReadM SNP 0004.scaffold00019 670674 1 C T - ReadM SNP 0004.scaffold00019 670695 1 T C - ReadM SNP 0004.scaffold00019 670730 1 A C - ReadM SNP 0004.scaffold00019 670800 1 T A - ReadM SNP 0004.scaffold00019 673376 1 A T - ReadM SNP 0004.scaffold00019 673798 1 T G - ReadM SNP 0004.scaffold00019 673883 1 T C - ReadM SNP 0004.scaffold00019 674013 1 C A - ReadM INDEL 0004.scaffold00019 674089 1 T . - ReadM SNP 0004.scaffold00019 674128 1 A G - ReadM SNP 0004.scaffold00019 674211 1 G A - ReadM SNP 0004.scaffold00019 674372 1 T C - ReadM SNP 0004.scaffold00019 674408 1 T C - ReadM SNP 0004.scaffold00019 674426 1 A G - ScafM INDEL 0004.scaffold00019 674800 2 .. TA scaffold9176 ScafM SNP 0004.scaffold00019 674806 1 G T scaffold9176 ReadM SNP 0004.scaffold00019 674919 1 G A - ReadM SNP 0004.scaffold00019 674958 1 A T - ReadM SNP 0004.scaffold00019 676474 1 C G - ReadM SNP 0004.scaffold00019 676693 1 G T - ReadM INDEL 0004.scaffold00019 676701 1 . A - ReadM SNP 0004.scaffold00019 676984 1 A T - ReadM SNP 0004.scaffold00019 677099 1 G C - ReadM SNP 0004.scaffold00019 677198 1 C G - ReadM SNP 0004.scaffold00019 677265 1 C T - ReadM SNP 0004.scaffold00019 677699 1 G A - ScafM SNP 0004.scaffold00019 678935 1 T C scaffold9176 ScafM SNP 0004.scaffold00019 678944 1 G T scaffold9176 ScafM SNP 0004.scaffold00019 679001 1 C A scaffold9176 ScafM SNP 0004.scaffold00019 679012 1 A G scaffold9176 ScafM SNP 0004.scaffold00019 679058 1 C A scaffold9176 ScafM SNP 0004.scaffold00019 679060 1 A G scaffold9176 ScafM SNP 0004.scaffold00019 679088 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 679091 1 C A scaffold9176 ScafM SNP 0004.scaffold00019 679113 1 G A scaffold9176 ScafM SNP 0004.scaffold00019 679180 1 G A scaffold9176 ScafM SNP 0004.scaffold00019 679192 2 TG AT scaffold9176 ScafM SNP 0004.scaffold00019 679252 1 A G scaffold9176 ScafM SNP 0004.scaffold00019 679303 1 G A scaffold9176 ScafM INDEL 0004.scaffold00019 679341 3 TCT ... scaffold9176 ScafM SNP 0004.scaffold00019 679356 1 G T scaffold9176 ScafM SNP 0004.scaffold00019 679394 1 G T scaffold9176 ScafM SNP 0004.scaffold00019 679438 1 T G scaffold9176 ScafM SNP 0004.scaffold00019 679478 1 G T scaffold9176 Both SNP 0004.scaffold00019 679487 1 A G scaffold9176 ScafM SNP 0004.scaffold00019 679583 1 C T scaffold9176 Both SNP 0004.scaffold00019 679594 1 G T scaffold9176 Both INDEL 0004.scaffold00019 679602 1 A . scaffold9176 Both SNP 0004.scaffold00019 679641 1 T G scaffold9176 ScafM SNP 0004.scaffold00019 679726 1 G T scaffold9176 ScafM SNP 0004.scaffold00019 679752 1 C T scaffold9176 ScafM SNP 0004.scaffold00019 679758 1 C T scaffold9176 ScafM SNP 0004.scaffold00019 679776 1 G A scaffold9176 ScafM SNP 0004.scaffold00019 679781 1 T C scaffold9176 ScafM SNP 0004.scaffold00019 679783 1 C G scaffold9176 ScafM SNP 0004.scaffold00019 679789 1 C T scaffold9176 ScafM SNP 0004.scaffold00019 679826 1 A C scaffold9176 ReadM SNP 0004.scaffold00019 680415 1 A G - ReadM SNP 0004.scaffold00019 680598 1 G A - ReadM SNP 0004.scaffold00019 681088 1 C T - ReadM SNP 0004.scaffold00019 681108 1 T A - ReadM SNP 0004.scaffold00019 681597 1 A G - ScafM SNP 0004.scaffold00019 681691 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 681707 1 C T scaffold9176 ScafM SNP 0004.scaffold00019 681721 1 G C scaffold9176 ScafM SNP 0004.scaffold00019 681772 1 C T scaffold9176 ScafM SNP 0004.scaffold00019 681804 1 T G scaffold9176 ScafM SNP 0004.scaffold00019 681843 1 T C scaffold9176 ScafM SNP 0004.scaffold00019 681932 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 681947 1 A G scaffold9176 ScafM SNP 0004.scaffold00019 681951 1 G A scaffold9176 ScafM SNP 0004.scaffold00019 682005 1 A C scaffold9176 ScafM SNP 0004.scaffold00019 682086 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 682088 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 682156 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 682188 1 G A scaffold9176 ScafM SNP 0004.scaffold00019 682270 1 A C scaffold9176 ScafM SNP 0004.scaffold00019 682515 2 GC CG scaffold9176 ScafM INDEL 0004.scaffold00019 682523 1 T . scaffold9176 ScafM SNP 0004.scaffold00019 682545 1 T A scaffold9176 Both SNP 0004.scaffold00019 682639 1 C T scaffold9176 Both SNP 0004.scaffold00019 682752 1 T A scaffold9176 ScafM SNP 0004.scaffold00019 683975 1 G T scaffold1196 ScafM SNP 0004.scaffold00019 683983 1 T A scaffold1196 ScafM SNP 0004.scaffold00019 683985 1 A G scaffold1196 ScafM SNP 0004.scaffold00019 683989 1 C T scaffold1196 ScafM SNP 0004.scaffold00019 684001 1 T C scaffold1196 ScafM SNP 0004.scaffold00019 684032 2 AC GT scaffold1196 ScafM SNP 0004.scaffold00019 684038 1 G C scaffold1196 ScafM SNP 0004.scaffold00019 684040 1 G A scaffold1196 ScafM SNP 0004.scaffold00019 684046 1 A T scaffold1196 ScafM SNP 0004.scaffold00019 684048 1 T C scaffold1196 ScafM SNP 0004.scaffold00019 684057 1 G C scaffold1196 ScafM SNP 0004.scaffold00019 684071 1 T A scaffold1196 ScafM SNP 0004.scaffold00019 684073 1 G A scaffold1196 ScafM SNP 0004.scaffold00019 684076 1 A C scaffold1196 ScafM SNP 0004.scaffold00019 684079 1 T A scaffold1196 ScafM SNP 0004.scaffold00019 684083 1 A C scaffold1196 ScafM SNP 0004.scaffold00019 684087 1 T A scaffold1196 ScafM SNP 0004.scaffold00019 684094 1 G A scaffold1196 ScafM SNP 0004.scaffold00019 684097 1 A G scaffold1196 ScafM SNP 0004.scaffold00019 684100 1 T A scaffold1196 ReadM SNP 0004.scaffold00019 686898 1 G A - ReadM SNP 0004.scaffold00019 687048 1 G T - ReadM SNP 0004.scaffold00019 687082 1 C T - ReadM SNP 0004.scaffold00019 687098 1 C T - ReadM SNP 0004.scaffold00019 687223 1 T A - ReadM SNP 0004.scaffold00019 687338 1 A T - ReadM SNP 0004.scaffold00019 687353 1 G A - ReadM SNP 0004.scaffold00019 687452 1 C A - ReadM SNP 0004.scaffold00019 687456 1 C T - ReadM SNP 0004.scaffold00019 687573 1 C T - ReadM SNP 0004.scaffold00019 687599 1 A G - ReadM SNP 0004.scaffold00019 687710 1 C T - ReadM SNP 0004.scaffold00019 687888 1 A G - ReadM SNP 0004.scaffold00019 687928 1 T G - ReadM SNP 0004.scaffold00019 687947 1 G A - ReadM SNP 0004.scaffold00019 687958 1 T C - ReadM SNP 0004.scaffold00019 687987 1 T C - ReadM SNP 0004.scaffold00019 688048 1 G A - ReadM SNP 0004.scaffold00019 688136 1 A G - ReadM SNP 0004.scaffold00019 688163 1 G C - ReadM SNP 0004.scaffold00019 688320 1 A G - ReadM SNP 0004.scaffold00019 688376 1 C T - ScafM SNP 0004.scaffold00019 688947 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 688957 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 689016 1 A G scaffold27757 ScafM SNP 0004.scaffold00019 689035 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 689144 1 C A scaffold27757 ScafM INDEL 0004.scaffold00019 689145 3 ... ATA scaffold27757 ScafM INDEL 0004.scaffold00019 689146 1 . A scaffold27757 ScafM INDEL 0004.scaffold00019 689147 1 . A scaffold27757 ScafM SNP 0004.scaffold00019 689226 1 C A scaffold27757 ScafM SNP 0004.scaffold00019 689426 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 689460 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 689502 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 689559 1 A C scaffold27757 ScafM SNP 0004.scaffold00019 689561 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 689583 1 G C scaffold27757 ScafM SNP 0004.scaffold00019 689589 1 G A scaffold27757 Both INDEL 0004.scaffold00019 689630 1 . G scaffold27757 ScafM SNP 0004.scaffold00019 689632 1 A C scaffold27757 Both SNP 0004.scaffold00019 689676 1 G T scaffold27757 ScafM SNP 0004.scaffold00019 689750 1 G T scaffold27757 ScafM SNP 0004.scaffold00019 689754 1 A G scaffold27757 ScafM SNP 0004.scaffold00019 689758 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 689806 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 689813 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 689817 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 689873 1 A G scaffold27757 ScafM INDEL 0004.scaffold00019 689904 1 . T scaffold27757 ScafM INDEL 0004.scaffold00019 689966 13 ............. CACGAATTTCACT scaffold27757 Both SNP 0004.scaffold00019 690004 1 T G scaffold27757 Both SNP 0004.scaffold00019 690049 1 G T scaffold27757 Both SNP 0004.scaffold00019 690062 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 690129 1 G A scaffold27757 Both SNP 0004.scaffold00019 690238 1 T G scaffold27757 ScafM SNP 0004.scaffold00019 690315 1 T A scaffold27757 Both SNP 0004.scaffold00019 690323 1 G A scaffold27757 Both SNP 0004.scaffold00019 690394 1 A G scaffold27757 Both SNP 0004.scaffold00019 690426 1 T C scaffold27757 Both SNP 0004.scaffold00019 690535 1 A C scaffold27757 ScafM SNP 0004.scaffold00019 690562 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 690578 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 690582 1 A G scaffold27757 ScafM SNP 0004.scaffold00019 690585 1 A G scaffold27757 Both SNP 0004.scaffold00019 690646 1 A T scaffold27757 Both SNP 0004.scaffold00019 690660 1 G C scaffold27757 Both SNP 0004.scaffold00019 690665 1 G C scaffold27757 Both SNP 0004.scaffold00019 690694 1 A T scaffold27757 ScafM SNP 0004.scaffold00019 690829 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 690849 1 C T scaffold27757 Both SNP 0004.scaffold00019 691007 1 C T scaffold27757 Both SNP 0004.scaffold00019 691064 1 A C scaffold27757 Both SNP 0004.scaffold00019 691105 1 T A scaffold27757 Both SNP 0004.scaffold00019 691149 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 691211 1 C G scaffold27757 ScafM SNP 0004.scaffold00019 691217 1 G A scaffold27757 Both SNP 0004.scaffold00019 691236 1 C T scaffold27757 Both SNP 0004.scaffold00019 691238 1 G A scaffold27757 Both SNP 0004.scaffold00019 691295 1 A G scaffold27757 Both SNP 0004.scaffold00019 691347 1 T A scaffold27757 Both SNP 0004.scaffold00019 691396 1 C G scaffold27757 ScafM SNP 0004.scaffold00019 691416 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 691431 1 G C scaffold27757 ScafM SNP 0004.scaffold00019 691447 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 691484 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 691489 1 C T scaffold27757 ScafM INDEL 0004.scaffold00019 691491 3 TGT ... scaffold27757 Both SNP 0004.scaffold00019 691519 1 G T scaffold27757 Both SNP 0004.scaffold00019 691611 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 691643 1 G A scaffold27757 ScafM INDEL 0004.scaffold00019 691725 8 ATGTCTGA ........ scaffold27757 Both SNP 0004.scaffold00019 691790 1 G T scaffold27757 Both SNP 0004.scaffold00019 691793 1 C T scaffold27757 Both SNP 0004.scaffold00019 691822 1 T A scaffold27757 ScafM SNP 0004.scaffold00019 691849 1 C G scaffold27757 Both SNP 0004.scaffold00019 691975 1 C A scaffold27757 Both SNP 0004.scaffold00019 691994 1 A G scaffold27757 ScafM INDEL 0004.scaffold00019 692028 16 ................ TGTCGCTGAAGAAGTG scaffold27757 ScafM SNP 0004.scaffold00019 692051 1 T C scaffold27757 ScafM SNP 0004.scaffold00019 692084 1 C T scaffold27757 Both SNP 0004.scaffold00019 692118 1 G A scaffold27757 Both SNP 0004.scaffold00019 692142 1 T A scaffold27757 Both SNP 0004.scaffold00019 692166 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 692259 1 G C scaffold27757 ScafM INDEL 0004.scaffold00019 692261 5 ..... ATCCG scaffold27757 Both INDEL 0004.scaffold00019 692311 1 . T scaffold27757 Both SNP 0004.scaffold00019 692374 1 T C scaffold27757 Both SNP 0004.scaffold00019 692391 1 C A scaffold27757 Both SNP 0004.scaffold00019 692535 1 C G scaffold27757 ReadM SNP 0004.scaffold00019 692662 1 C G - ReadM SNP 0004.scaffold00019 692689 1 A G - Both INDEL 0004.scaffold00019 692758 1 T . scaffold27757 ScafM INDEL 0004.scaffold00019 692814 3 ... TAG scaffold27757 Both SNP 0004.scaffold00019 692853 1 G T scaffold27757 Both SNP 0004.scaffold00019 692889 1 A C scaffold27757 Both SNP 0004.scaffold00019 692923 1 G A scaffold27757 Both SNP 0004.scaffold00019 693023 1 G A scaffold27757 Both SNP 0004.scaffold00019 693041 1 A G scaffold27757 ScafM SNP 0004.scaffold00019 693082 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 693084 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 693105 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 693107 1 T G scaffold27757 ScafM SNP 0004.scaffold00019 693114 1 G A scaffold27757 Both SNP 0004.scaffold00019 693120 1 T C scaffold27757 Both SNP 0004.scaffold00019 693202 1 A G scaffold27757 Both SNP 0004.scaffold00019 693234 1 A G scaffold27757 Both SNP 0004.scaffold00019 693415 1 C G scaffold27757 Both SNP 0004.scaffold00019 693476 1 G T scaffold27757 Both SNP 0004.scaffold00019 693480 1 G A scaffold27757 ScafM INDEL 0004.scaffold00019 693529 5 ..... CAGTA scaffold27757 ScafM INDEL 0004.scaffold00019 693577 2 .. AT scaffold27757 ScafM INDEL 0004.scaffold00019 693579 1 . T scaffold27757 ScafM SNP 0004.scaffold00019 693633 1 G T scaffold27757 ScafM SNP 0004.scaffold00019 693651 1 G A scaffold27757 ScafM INDEL 0004.scaffold00019 693695 1 A . scaffold27757 ScafM SNP 0004.scaffold00019 693811 1 C T scaffold27757 ScafM SNP 0004.scaffold00019 693839 1 G A scaffold27757 Both SNP 0004.scaffold00019 694230 1 A T scaffold27757 ScafM SNP 0004.scaffold00019 694283 1 A G scaffold27757 ScafM SNP 0004.scaffold00019 694643 1 A C scaffold27757 ScafM SNP 0004.scaffold00019 694646 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 694654 1 C A scaffold27757 Both SNP 0004.scaffold00019 694667 1 A G scaffold27757 Both SNP 0004.scaffold00019 694848 1 C G scaffold27757 Both SNP 0004.scaffold00019 694886 1 T G scaffold27757 Both SNP 0004.scaffold00019 694923 1 C T scaffold27757 Both SNP 0004.scaffold00019 694932 1 T C scaffold27757 Both SNP 0004.scaffold00019 694959 1 G A scaffold27757 Both SNP 0004.scaffold00019 695051 1 G A scaffold27757 ScafM SNP 0004.scaffold00019 695077 2 TT GG scaffold27757 ReadM SNP 0004.scaffold00019 695296 1 A G - ReadM SNP 0004.scaffold00019 695329 1 G C - ReadM SNP 0004.scaffold00019 695344 1 T C - ReadM SNP 0004.scaffold00019 695397 1 T C - ReadM SNP 0004.scaffold00019 695460 1 G A - Both SNP 0004.scaffold00019 696629 1 G A scaffold42994 Both SNP 0004.scaffold00019 696970 2 AA GG scaffold42994 Both SNP 0004.scaffold00019 696985 1 A G scaffold42994 Both SNP 0004.scaffold00019 697051 1 G C scaffold42994 ScafM INDEL 0004.scaffold00019 697199 2 TT .. scaffold42994 ScafM INDEL 0004.scaffold00019 697245 11 TAAAAAAAAAG ........... scaffold42994 ScafM INDEL 0004.scaffold00019 697267 4 .... CAAA scaffold42994 ScafM SNP 0004.scaffold00019 697268 2 TC AA scaffold42994 ScafM SNP 0004.scaffold00019 697283 1 C A scaffold42994 Both INDEL 0004.scaffold00019 697368 1 . C scaffold42994 Both SNP 0004.scaffold00019 697402 1 G C scaffold42994 ReadM SNP 0004.scaffold00019 697554 1 T G - ReadM SNP 0004.scaffold00019 698789 1 T G - ReadM SNP 0004.scaffold00019 698959 1 A G - ReadM SNP 0004.scaffold00019 698971 1 G T - ReadM SNP 0004.scaffold00019 699683 1 T C - ReadM SNP 0004.scaffold00019 699867 1 T C - ReadM SNP 0004.scaffold00019 699959 1 T A - ReadM SNP 0004.scaffold00019 700171 1 A G - ReadM SNP 0004.scaffold00019 700371 1 A G - ReadM SNP 0004.scaffold00019 700532 1 A G - ReadM SNP 0004.scaffold00019 700618 1 A G - ScafM SNP 0004.scaffold00019 700920 1 A T scaffold3285 ScafM SNP 0004.scaffold00019 700924 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 700939 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 700976 1 T C scaffold3285 Both SNP 0004.scaffold00019 701000 1 T A scaffold3285 ScafM SNP 0004.scaffold00019 701036 1 A C scaffold3285 ScafM SNP 0004.scaffold00019 701053 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 701060 1 C T scaffold3285 ScafM SNP 0004.scaffold00019 701127 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 701154 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 701166 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 701176 1 G T scaffold3285 ScafM SNP 0004.scaffold00019 701217 2 TA AG scaffold3285 ScafM SNP 0004.scaffold00019 701283 1 T A scaffold3285 Both SNP 0004.scaffold00019 701337 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 701481 1 C A scaffold3285 ScafM SNP 0004.scaffold00019 701540 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 701638 1 A T scaffold3285 ScafM SNP 0004.scaffold00019 701664 1 G T scaffold3285 ScafM SNP 0004.scaffold00019 701715 1 A C scaffold3285 Both SNP 0004.scaffold00019 701832 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 701837 1 T A scaffold3285 ScafM SNP 0004.scaffold00019 701867 1 C A scaffold3285 ScafM INDEL 0004.scaffold00019 701869 6 ...... CCCCCC scaffold3285 ScafM SNP 0004.scaffold00019 701882 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 701961 1 C T scaffold3285 ScafM SNP 0004.scaffold00019 701980 1 G T scaffold3285 ScafM SNP 0004.scaffold00019 701988 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 701990 2 GT AC scaffold3285 ScafM SNP 0004.scaffold00019 701997 1 C G scaffold3285 ScafM SNP 0004.scaffold00019 702016 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 702021 1 C T scaffold3285 Both SNP 0004.scaffold00019 702039 1 A C scaffold3285 ScafM SNP 0004.scaffold00019 702320 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 702338 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 702357 1 C T scaffold3285 Both SNP 0004.scaffold00019 702439 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 702486 1 A T scaffold3285 ScafM SNP 0004.scaffold00019 702506 1 A C scaffold3285 Both SNP 0004.scaffold00019 702519 1 C A scaffold3285 ScafM SNP 0004.scaffold00019 702537 3 AAA CTT scaffold3285 ScafM SNP 0004.scaffold00019 702543 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 702551 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 702580 1 A C scaffold3285 ScafM SNP 0004.scaffold00019 702599 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 702681 1 T C scaffold3285 Both SNP 0004.scaffold00019 702848 1 C T scaffold3285 ScafM SNP 0004.scaffold00019 702850 1 C T scaffold3285 ScafM INDEL 0004.scaffold00019 702887 2 GT .A scaffold3285 ScafM SNP 0004.scaffold00019 702893 1 G C scaffold3285 ScafM SNP 0004.scaffold00019 702907 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 702933 1 C T scaffold3285 ScafM SNP 0004.scaffold00019 702935 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 702993 1 C A scaffold3285 ScafM SNP 0004.scaffold00019 703025 1 A G scaffold3285 ScafM INDEL 0004.scaffold00019 703038 6 ...... TGTGCC scaffold3285 ScafM INDEL 0004.scaffold00019 703041 5 ..... GAAAC scaffold3285 ScafM INDEL 0004.scaffold00019 703043 1 . C scaffold3285 ReadM SNP 0004.scaffold00019 703066 1 T C - ScafM SNP 0004.scaffold00019 703087 1 G A scaffold3285 ScafM INDEL 0004.scaffold00019 703103 2 TA .. scaffold3285 ScafM SNP 0004.scaffold00019 703152 1 T G scaffold3285 Both SNP 0004.scaffold00019 703181 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 703229 1 A T scaffold3285 Both SNP 0004.scaffold00019 703235 1 A G scaffold3285 ScafM SNP 0004.scaffold00019 703240 2 CG AA scaffold3285 ScafM SNP 0004.scaffold00019 703342 1 C T scaffold3285 ScafM SNP 0004.scaffold00019 703393 1 C G scaffold3285 ScafM SNP 0004.scaffold00019 703402 1 A C scaffold3285 Both SNP 0004.scaffold00019 703432 1 T C scaffold3285 ScafM SNP 0004.scaffold00019 703502 1 A G scaffold3285 Both SNP 0004.scaffold00019 703511 1 C T scaffold3285 ScafM INDEL 0004.scaffold00019 703611 2 CA .T scaffold3285 ScafM SNP 0004.scaffold00019 703625 1 T A scaffold3285 ScafM SNP 0004.scaffold00019 703674 1 C G scaffold3285 ScafM SNP 0004.scaffold00019 703701 1 G A scaffold3285 ScafM SNP 0004.scaffold00019 703781 2 GG TA scaffold3285 Both SNP 0004.scaffold00019 703871 1 A G scaffold3285 Both SNP 0004.scaffold00019 704063 1 A T scaffold886 ScafM INDEL 0004.scaffold00019 704179 5 ..... ATCAA scaffold886 ScafM SNP 0004.scaffold00019 704185 1 G A scaffold886 ScafM SNP 0004.scaffold00019 704249 1 A G scaffold886 ScafM SNP 0004.scaffold00019 704254 1 C T scaffold886 ScafM SNP 0004.scaffold00019 704274 1 A T scaffold886 ScafM SNP 0004.scaffold00019 704468 1 A G scaffold886 ScafM SNP 0004.scaffold00019 704536 1 T G scaffold886 ScafM SNP 0004.scaffold00019 704548 1 C T scaffold886 ScafM SNP 0004.scaffold00019 706461 1 T C scaffold886 ScafM SNP 0004.scaffold00019 706493 1 T C scaffold886 ScafM SNP 0004.scaffold00019 706564 1 C T scaffold886 ReadM SNP 0004.scaffold00019 707327 1 A G - ReadM SNP 0004.scaffold00019 707359 1 A G - ReadM SNP 0004.scaffold00019 707394 1 T A - ReadM INDEL 0004.scaffold00019 707554 2 TT .. - ReadM SNP 0004.scaffold00019 707702 1 T C - ReadM SNP 0004.scaffold00019 707768 1 T C - ReadM SNP 0004.scaffold00019 707940 1 T C - ReadM SNP 0004.scaffold00019 708061 1 T C - ReadM SNP 0004.scaffold00019 708276 1 G T - ReadM SNP 0004.scaffold00019 708374 1 T A - ReadM SNP 0004.scaffold00019 708471 1 T A - ReadM SNP 0004.scaffold00019 708533 1 A G - ReadM SNP 0004.scaffold00019 708545 1 T C - ReadM SNP 0004.scaffold00019 708668 1 C T - Both SNP 0004.scaffold00019 708805 1 C T scaffold886 Both SNP 0004.scaffold00019 708908 1 C T scaffold886 Both INDEL 0004.scaffold00019 708977 1 . T scaffold886 Both SNP 0004.scaffold00019 708998 1 G T scaffold886 Both SNP 0004.scaffold00019 709085 1 C T scaffold886 Both SNP 0004.scaffold00019 709191 1 G A scaffold886 Both SNP 0004.scaffold00019 709336 1 C A scaffold886 Both INDEL 0004.scaffold00019 709383 2 .. GT scaffold886 Both INDEL 0004.scaffold00019 709449 1 C . scaffold886 Both SNP 0004.scaffold00019 709491 1 A G scaffold886 Both SNP 0004.scaffold00019 709584 1 T C scaffold886 Both SNP 0004.scaffold00019 709672 1 C T scaffold886 ReadM SNP 0004.scaffold00019 710018 1 G A - Both SNP 0004.scaffold00019 710246 1 G A scaffold886 Both SNP 0004.scaffold00019 710371 1 G T scaffold886 Both SNP 0004.scaffold00019 710423 1 T G scaffold886 Both SNP 0004.scaffold00019 710449 1 G A scaffold886 Both SNP 0004.scaffold00019 710479 1 C G scaffold886 Both SNP 0004.scaffold00019 710594 1 A C scaffold886 Both SNP 0004.scaffold00019 710636 1 C A scaffold886 Both SNP 0004.scaffold00019 710970 1 C T scaffold886 Both SNP 0004.scaffold00019 711147 1 C G scaffold886 Both SNP 0004.scaffold00019 711215 1 A C scaffold886 Both SNP 0004.scaffold00019 711451 1 A G scaffold886 Both SNP 0004.scaffold00019 711488 1 T C scaffold886 Both INDEL 0004.scaffold00019 711552 1 G . scaffold886 ReadM SNP 0004.scaffold00019 711620 1 A C - ReadM SNP 0004.scaffold00019 711691 1 A G - ReadM SNP 0004.scaffold00019 711713 1 C A - ReadM SNP 0004.scaffold00019 711734 1 C T - ReadM SNP 0004.scaffold00019 711743 1 T C - ReadM SNP 0004.scaffold00019 711835 1 T A - ReadM SNP 0004.scaffold00019 711915 1 T C - ReadM SNP 0004.scaffold00019 711919 1 A G - ReadM SNP 0004.scaffold00019 712259 1 G T - ReadM SNP 0004.scaffold00019 712326 1 T C - ReadM SNP 0004.scaffold00019 712341 1 C T - ReadM SNP 0004.scaffold00019 712360 1 A G - ReadM SNP 0004.scaffold00019 712544 1 T C - ReadM SNP 0004.scaffold00019 712647 1 A T - ReadM SNP 0004.scaffold00019 712934 1 C T - ReadM SNP 0004.scaffold00019 712952 1 A C - ReadM SNP 0004.scaffold00019 713159 1 C T - ReadM SNP 0004.scaffold00019 713328 1 A G - ReadM SNP 0004.scaffold00019 713442 1 G T - ReadM SNP 0004.scaffold00019 713523 1 T C - ReadM SNP 0004.scaffold00019 713694 1 T C - ReadM SNP 0004.scaffold00019 713763 1 G T - ReadM SNP 0004.scaffold00019 713789 1 T G - ReadM SNP 0004.scaffold00019 713845 1 A G - ScafM INDEL 0004.scaffold00019 714125 8 TCATTAAT ........ scaffold886 ScafM INDEL 0004.scaffold00019 714153 2 TT .. scaffold886 ScafM INDEL 0004.scaffold00019 714342 4 .... TATC scaffold886 ScafM INDEL 0004.scaffold00019 714522 1 . T scaffold886 ScafM SNP 0004.scaffold00019 714524 1 A T scaffold886 ScafM INDEL 0004.scaffold00019 714527 3 GGG ... scaffold886 ReadM SNP 0004.scaffold00019 714713 1 T C - ReadM SNP 0004.scaffold00019 714754 1 C A - ScafM SNP 0004.scaffold00019 714859 1 A G scaffold886 Both INDEL 0004.scaffold00019 714901 1 . G scaffold886 ReadM SNP 0004.scaffold00019 714988 1 G A - ReadM SNP 0004.scaffold00019 715091 1 A G - ReadM SNP 0004.scaffold00019 715319 1 A G - ReadM SNP 0004.scaffold00019 715397 1 T A - ReadM SNP 0004.scaffold00019 715483 1 T C - ReadM SNP 0004.scaffold00019 715605 1 A C - ReadM INDEL 0004.scaffold00019 715711 1 . A - ReadM SNP 0004.scaffold00019 716286 1 T C - ReadM SNP 0004.scaffold00019 716375 1 C T - ReadM SNP 0004.scaffold00019 716736 2 GT AA - ReadM SNP 0004.scaffold00019 716925 1 T G - ReadM SNP 0004.scaffold00019 717051 1 G A - ReadM SNP 0004.scaffold00019 717157 1 T C - ReadM SNP 0004.scaffold00019 717326 1 T G - ReadM SNP 0004.scaffold00019 717395 1 G C - ReadM SNP 0004.scaffold00019 717534 1 G A - ReadM INDEL 0004.scaffold00019 717682 1 . G - ReadM SNP 0004.scaffold00019 717716 1 T C - ReadM SNP 0004.scaffold00019 717933 1 G C - ReadM SNP 0004.scaffold00019 718103 1 A G - ReadM SNP 0004.scaffold00019 718139 1 C T - ReadM SNP 0004.scaffold00019 718185 1 A G - ReadM INDEL 0004.scaffold00019 718573 1 G . - ReadM SNP 0004.scaffold00019 718604 1 T C - ReadM SNP 0004.scaffold00019 718637 1 C G - ReadM SNP 0004.scaffold00019 718662 1 G T - ReadM SNP 0004.scaffold00019 718674 1 A G - ReadM SNP 0004.scaffold00019 718911 1 G A - ReadM INDEL 0004.scaffold00019 718919 1 A . - ReadM SNP 0004.scaffold00019 718934 1 T C - ReadM SNP 0004.scaffold00019 719096 1 C T - ReadM SNP 0004.scaffold00019 719101 1 C A - ReadM SNP 0004.scaffold00019 719260 1 T G - ReadM SNP 0004.scaffold00019 719345 1 C T - ReadM SNP 0004.scaffold00019 719611 1 G A - ReadM SNP 0004.scaffold00019 719754 1 A G - ReadM SNP 0004.scaffold00019 719762 1 G A - ReadM SNP 0004.scaffold00019 719969 1 A G - ReadM SNP 0004.scaffold00019 720067 1 T C - ReadM SNP 0004.scaffold00019 720292 1 A C - ReadM SNP 0004.scaffold00019 720315 1 C T - ReadM SNP 0004.scaffold00019 720358 1 C T - ScafM SNP 0004.scaffold00019 720796 1 C T scaffold886 ScafM SNP 0004.scaffold00019 720836 1 A T scaffold886 Both SNP 0004.scaffold00019 721119 1 G T scaffold886 Both SNP 0004.scaffold00019 721438 1 A G scaffold886 Both SNP 0004.scaffold00019 721483 1 A G scaffold886 Both SNP 0004.scaffold00019 721521 1 C G scaffold886 ScafM SNP 0004.scaffold00019 721566 1 G C scaffold886 ScafM SNP 0004.scaffold00019 721642 1 C A scaffold886 ScafM SNP 0004.scaffold00019 721831 1 T A scaffold886 ScafM INDEL 0004.scaffold00019 721860 2 .. TA scaffold886 ScafM SNP 0004.scaffold00019 721899 1 G C scaffold886 ScafM SNP 0004.scaffold00019 721946 1 T C scaffold886 ScafM SNP 0004.scaffold00019 721954 1 A G scaffold886 ScafM SNP 0004.scaffold00019 721998 1 C A scaffold886 ScafM SNP 0004.scaffold00019 722116 1 C T scaffold886 ScafM SNP 0004.scaffold00019 722141 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 722400 23 ....................... AAAGTTAGAATGTCAAATTGGTG scaffold886 ScafM INDEL 0004.scaffold00019 722403 2 .. GA scaffold886 ScafM SNP 0004.scaffold00019 722826 1 A C scaffold886 ScafM SNP 0004.scaffold00019 722828 1 C T scaffold886 ScafM SNP 0004.scaffold00019 722867 1 C T scaffold886 ScafM SNP 0004.scaffold00019 722869 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 722908 3 TTT ..C scaffold886 ScafM SNP 0004.scaffold00019 722912 1 T A scaffold886 ScafM SNP 0004.scaffold00019 723346 1 C A scaffold886 ScafM SNP 0004.scaffold00019 723362 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 723384 1 T . scaffold886 ScafM SNP 0004.scaffold00019 723388 1 T C scaffold886 ScafM SNP 0004.scaffold00019 723398 1 G A scaffold886 ScafM INDEL 0004.scaffold00019 723493 11 AATTACGGAAT ........... scaffold886 ScafM INDEL 0004.scaffold00019 723507 1 T . scaffold886 ScafM SNP 0004.scaffold00019 723533 1 C T scaffold886 ScafM SNP 0004.scaffold00019 723809 1 G A scaffold886 ScafM SNP 0004.scaffold00019 724350 1 G A scaffold886 ScafM SNP 0004.scaffold00019 724748 1 T A scaffold886 Both SNP 0004.scaffold00019 724888 1 G C scaffold886 Both INDEL 0004.scaffold00019 724894 1 . G scaffold886 Both SNP 0004.scaffold00019 724969 1 C T scaffold886 ScafM SNP 0004.scaffold00019 724986 1 C T scaffold886 ScafM SNP 0004.scaffold00019 725005 1 C A scaffold886 ScafM SNP 0004.scaffold00019 725045 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 725055 1 . A scaffold886 ScafM SNP 0004.scaffold00019 725075 1 A G scaffold886 ScafM SNP 0004.scaffold00019 725084 1 A T scaffold886 ScafM SNP 0004.scaffold00019 725380 1 A G scaffold886 ScafM SNP 0004.scaffold00019 725426 1 G A scaffold886 ScafM SNP 0004.scaffold00019 725436 1 T A scaffold886 Both SNP 0004.scaffold00019 725445 1 C T scaffold886 Both SNP 0004.scaffold00019 725517 1 G A scaffold886 ScafM SNP 0004.scaffold00019 725547 1 C T scaffold886 ScafM SNP 0004.scaffold00019 725564 1 T C scaffold886 ScafM SNP 0004.scaffold00019 725581 1 T A scaffold886 ScafM SNP 0004.scaffold00019 725597 1 T C scaffold886 ScafM SNP 0004.scaffold00019 725639 1 A G scaffold886 ScafM SNP 0004.scaffold00019 725649 1 A G scaffold886 ScafM SNP 0004.scaffold00019 725684 1 G A scaffold886 ScafM INDEL 0004.scaffold00019 725709 3 AAG ... scaffold886 ScafM SNP 0004.scaffold00019 725726 1 G A scaffold886 Both INDEL 0004.scaffold00019 725758 1 A . scaffold886 ScafM SNP 0004.scaffold00019 725822 1 G A scaffold886 ScafM SNP 0004.scaffold00019 725852 2 AT CA scaffold886 ScafM SNP 0004.scaffold00019 725868 1 T C scaffold886 ReadM SNP 0004.scaffold00019 725991 1 A C - ReadM SNP 0004.scaffold00019 726036 1 C T - ReadM SNP 0004.scaffold00019 726040 1 T C - ScafM SNP 0004.scaffold00019 726331 1 A G scaffold886 ScafM SNP 0004.scaffold00019 726334 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 726340 3 AAG ... scaffold886 ScafM SNP 0004.scaffold00019 726364 1 C G scaffold886 ScafM SNP 0004.scaffold00019 726414 1 C G scaffold886 ScafM SNP 0004.scaffold00019 726419 1 A C scaffold886 ScafM SNP 0004.scaffold00019 726422 1 G T scaffold886 ScafM SNP 0004.scaffold00019 726451 1 G A scaffold886 ScafM SNP 0004.scaffold00019 726478 1 T C scaffold886 ScafM SNP 0004.scaffold00019 726549 1 G A scaffold886 ScafM INDEL 0004.scaffold00019 726573 2 TG .. scaffold886 ScafM SNP 0004.scaffold00019 726576 1 T A scaffold886 ScafM SNP 0004.scaffold00019 726689 2 GG AA scaffold886 ScafM SNP 0004.scaffold00019 726694 2 CG TT scaffold886 ScafM SNP 0004.scaffold00019 726706 1 C T scaffold886 ScafM SNP 0004.scaffold00019 726710 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 726768 8 ........ AACTATAC scaffold886 ScafM SNP 0004.scaffold00019 726789 1 T C scaffold886 ScafM INDEL 0004.scaffold00019 726824 1 . T scaffold886 ScafM SNP 0004.scaffold00019 726832 1 T C scaffold886 ScafM SNP 0004.scaffold00019 726886 1 T C scaffold886 ScafM SNP 0004.scaffold00019 726897 1 T C scaffold886 ScafM SNP 0004.scaffold00019 726907 1 A G scaffold886 ScafM SNP 0004.scaffold00019 726922 1 G A scaffold886 ScafM SNP 0004.scaffold00019 726995 3 ACT GAA scaffold886 ScafM SNP 0004.scaffold00019 727041 1 T C scaffold886 ScafM SNP 0004.scaffold00019 727093 1 C T scaffold886 ScafM SNP 0004.scaffold00019 727118 1 A G scaffold886 ScafM SNP 0004.scaffold00019 727133 1 T A scaffold886 ScafM SNP 0004.scaffold00019 727154 1 A T scaffold886 ScafM SNP 0004.scaffold00019 727161 1 C G scaffold886 ScafM SNP 0004.scaffold00019 727490 1 C T scaffold886 ScafM SNP 0004.scaffold00019 727495 1 A C scaffold886 ScafM INDEL 0004.scaffold00019 727571 30 .............................. ACAATGACAATGACAATGACAATGACAATG scaffold886 ScafM SNP 0004.scaffold00019 727611 3 TTT AAA scaffold886 ScafM SNP 0004.scaffold00019 727636 1 T A scaffold886 ScafM SNP 0004.scaffold00019 728837 1 C T scaffold886 ScafM SNP 0004.scaffold00019 728905 2 CG AA scaffold886 ScafM INDEL 0004.scaffold00019 728908 1 . T scaffold886 ScafM SNP 0004.scaffold00019 728917 1 T A scaffold886 ScafM SNP 0004.scaffold00019 728920 1 A T scaffold886 ScafM INDEL 0004.scaffold00019 728924 2 GA .C scaffold886 ScafM SNP 0004.scaffold00019 728940 2 CT AA scaffold886 ScafM SNP 0004.scaffold00019 729341 1 C G scaffold886 ScafM SNP 0004.scaffold00019 729400 1 C T scaffold886 ScafM SNP 0004.scaffold00019 729410 2 TA CC scaffold886 ScafM SNP 0004.scaffold00019 729414 1 T C scaffold886 ScafM SNP 0004.scaffold00019 729642 1 T C scaffold886 ScafM SNP 0004.scaffold00019 729902 1 G C scaffold886 ScafM SNP 0004.scaffold00019 729972 1 G A scaffold886 ScafM SNP 0004.scaffold00019 729989 1 A C scaffold886 ScafM SNP 0004.scaffold00019 729995 1 C T scaffold886 ScafM SNP 0004.scaffold00019 733260 1 G A scaffold886 ReadM INDEL 0004.scaffold00019 733483 1 . A - ReadM SNP 0004.scaffold00019 733530 1 T A - ReadM SNP 0004.scaffold00019 733675 1 C G - ScafM SNP 0004.scaffold00019 733972 1 G A scaffold886 ScafM SNP 0004.scaffold00019 733975 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 733982 1 G . scaffold886 ScafM SNP 0004.scaffold00019 733989 1 T A scaffold886 Both SNP 0004.scaffold00019 734068 1 C T scaffold886 Both SNP 0004.scaffold00019 734114 1 A G scaffold886 Both SNP 0004.scaffold00019 734157 1 C G scaffold886 ScafM SNP 0004.scaffold00019 734172 1 G A scaffold886 ScafM SNP 0004.scaffold00019 734174 1 T C scaffold886 ReadM INDEL 0004.scaffold00019 734332 1 . A - ReadM SNP 0004.scaffold00019 734357 1 C T - ReadM SNP 0004.scaffold00019 734439 1 T C - ReadM SNP 0004.scaffold00019 734460 1 G A - ReadM SNP 0004.scaffold00019 734530 1 T C - ReadM SNP 0004.scaffold00019 734564 1 A G - ReadM SNP 0004.scaffold00019 734716 1 C T - ScafM SNP 0004.scaffold00019 742355 1 C T scaffold16189 ReadM SNP 0004.scaffold00019 747097 1 A G - ScafM INDEL 0004.scaffold00019 747243 1 . A scaffold886 ScafM INDEL 0004.scaffold00019 747255 2 .. AT scaffold886 ScafM SNP 0004.scaffold00019 747322 1 T A scaffold886 ScafM INDEL 0004.scaffold00019 747331 1 . A scaffold886 ScafM SNP 0004.scaffold00019 747376 1 T C scaffold886 ScafM SNP 0004.scaffold00019 747452 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 747454 3 ... ATT scaffold886 ScafM SNP 0004.scaffold00019 747545 1 T C scaffold886 ScafM SNP 0004.scaffold00019 747565 1 A G scaffold886 ScafM SNP 0004.scaffold00019 747587 1 G T scaffold886 ScafM SNP 0004.scaffold00019 747632 1 G C scaffold886 ScafM SNP 0004.scaffold00019 747646 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 747714 3 TAT ... scaffold886 ScafM INDEL 0004.scaffold00019 747768 1 A . scaffold886 ScafM SNP 0004.scaffold00019 747770 1 A G scaffold886 ScafM SNP 0004.scaffold00019 747873 1 A G scaffold886 ScafM SNP 0004.scaffold00019 747879 1 C A scaffold886 ScafM SNP 0004.scaffold00019 747899 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 747920 4 .... ATAT scaffold886 ScafM INDEL 0004.scaffold00019 747926 1 . T scaffold886 ScafM INDEL 0004.scaffold00019 748081 2 .. GT scaffold886 ScafM SNP 0004.scaffold00019 748104 1 T C scaffold886 ScafM SNP 0004.scaffold00019 748111 1 G A scaffold886 ScafM SNP 0004.scaffold00019 748137 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 748160 2 .. TA scaffold886 ScafM SNP 0004.scaffold00019 748219 1 T A scaffold886 ScafM SNP 0004.scaffold00019 748233 1 A T scaffold886 ScafM SNP 0004.scaffold00019 748238 1 G A scaffold886 Both SNP 0004.scaffold00019 748923 1 A T scaffold886 ScafM SNP 0004.scaffold00019 748965 1 C T scaffold886 ReadM SNP 0004.scaffold00019 749456 1 C T - ReadM SNP 0004.scaffold00019 749467 1 C T - ReadM SNP 0004.scaffold00019 749530 1 T C - ReadM SNP 0004.scaffold00019 749549 1 T C - ScafM SNP 0004.scaffold00019 749610 1 T A scaffold886 ScafM INDEL 0004.scaffold00019 749617 1 A . scaffold886 ScafM SNP 0004.scaffold00019 749621 1 T C scaffold886 ScafM INDEL 0004.scaffold00019 749642 1 . T scaffold886 ScafM SNP 0004.scaffold00019 749779 11 CAATGAAAATA ACCCCCCCCCC scaffold886 ScafM SNP 0004.scaffold00019 749811 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 749842 3 ... GAG scaffold886 Both SNP 0004.scaffold00019 749898 1 A G scaffold886 Both SNP 0004.scaffold00019 750034 1 T C scaffold886 Both SNP 0004.scaffold00019 750051 1 C A scaffold886 Both SNP 0004.scaffold00019 750055 1 A C scaffold886 ReadM SNP 0004.scaffold00019 750100 1 A G - Both SNP 0004.scaffold00019 750180 1 T A scaffold886 Both SNP 0004.scaffold00019 750184 1 A G scaffold886 Both INDEL 0004.scaffold00019 750241 1 T . scaffold886 Both SNP 0004.scaffold00019 750320 1 A T scaffold886 ScafM SNP 0004.scaffold00019 750335 1 A T scaffold886 ScafM SNP 0004.scaffold00019 750395 1 A C scaffold886 ScafM SNP 0004.scaffold00019 750399 1 A C scaffold886 ScafM INDEL 0004.scaffold00019 750430 1 G . scaffold886 ScafM SNP 0004.scaffold00019 750479 1 G A scaffold886 ScafM SNP 0004.scaffold00019 750527 1 C T scaffold886 ScafM SNP 0004.scaffold00019 750529 1 G A scaffold886 ScafM SNP 0004.scaffold00019 750643 1 T A scaffold886 ScafM SNP 0004.scaffold00019 750694 1 G A scaffold886 ScafM SNP 0004.scaffold00019 750710 1 A C scaffold886 ScafM SNP 0004.scaffold00019 750782 1 T G scaffold886 ReadM SNP 0004.scaffold00019 751690 1 A T - ReadM INDEL 0004.scaffold00019 751730 1 G . - ReadM SNP 0004.scaffold00019 751820 1 T C - ReadM SNP 0004.scaffold00019 751831 1 A G - ReadM SNP 0004.scaffold00019 751856 1 A T - ReadM SNP 0004.scaffold00019 751895 1 G A - ReadM SNP 0004.scaffold00019 751904 1 C T - ReadM SNP 0004.scaffold00019 752047 1 G A - ReadM SNP 0004.scaffold00019 752111 1 C A - ReadM INDEL 0004.scaffold00019 752276 1 . C - ScafM INDEL 0004.scaffold00019 752443 1 . T scaffold886 ScafM SNP 0004.scaffold00019 752822 1 G A scaffold886 ScafM SNP 0004.scaffold00019 752824 1 G A scaffold886 ScafM INDEL 0004.scaffold00019 752826 3 CTT ... scaffold886 ReadM SNP 0004.scaffold00019 753333 1 G C - ScafM SNP 0004.scaffold00019 762642 1 T G scaffold886 ScafM SNP 0004.scaffold00019 762674 1 T G scaffold886 ScafM SNP 0004.scaffold00019 762676 1 G T scaffold886 ScafM SNP 0004.scaffold00019 762689 2 AC GT scaffold886 ScafM SNP 0004.scaffold00019 762698 1 G A scaffold886 ScafM SNP 0004.scaffold00019 762731 1 C A scaffold886 Both SNP 0004.scaffold00019 762786 1 G A scaffold886 ScafM SNP 0004.scaffold00019 762855 1 A T scaffold886 ScafM SNP 0004.scaffold00019 762877 1 G T scaffold886 ScafM SNP 0004.scaffold00019 762908 1 T G scaffold886 ScafM SNP 0004.scaffold00019 762943 1 T C scaffold886 ScafM SNP 0004.scaffold00019 763001 2 CA TT scaffold886 ScafM SNP 0004.scaffold00019 763051 1 T G scaffold886 ScafM SNP 0004.scaffold00019 763123 1 T C scaffold886 Both SNP 0004.scaffold00019 763157 1 T A scaffold886 Both SNP 0004.scaffold00019 763172 1 T C scaffold886 Both SNP 0004.scaffold00019 763177 1 A T scaffold886 ScafM SNP 0004.scaffold00019 763277 1 G A scaffold886 ScafM SNP 0004.scaffold00019 763280 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 763287 5 TAATT ....C scaffold886 Both SNP 0004.scaffold00019 763361 1 T A scaffold886 Both SNP 0004.scaffold00019 763504 1 T C scaffold886 Both SNP 0004.scaffold00019 763514 1 T C scaffold886 Both SNP 0004.scaffold00019 763531 1 T C scaffold886 Both SNP 0004.scaffold00019 763648 1 G A scaffold886 Both SNP 0004.scaffold00019 763663 1 T C scaffold886 Both SNP 0004.scaffold00019 763728 1 C T scaffold886 Both SNP 0004.scaffold00019 763763 1 C G scaffold886 ScafM SNP 0004.scaffold00019 763793 1 A C scaffold886 ScafM SNP 0004.scaffold00019 763819 1 A G scaffold886 ScafM SNP 0004.scaffold00019 763824 1 G A scaffold886 Both SNP 0004.scaffold00019 763837 1 T A scaffold886 Both SNP 0004.scaffold00019 763863 1 G A scaffold886 ScafM SNP 0004.scaffold00019 763959 1 A G scaffold886 ScafM INDEL 0004.scaffold00019 763961 4 .... CGCA scaffold886 ScafM SNP 0004.scaffold00019 763974 1 T C scaffold886 ScafM SNP 0004.scaffold00019 763999 1 A G scaffold886 ScafM SNP 0004.scaffold00019 764003 1 C T scaffold886 ScafM SNP 0004.scaffold00019 764015 1 T G scaffold886 ScafM SNP 0004.scaffold00019 764033 1 A G scaffold886 ReadM SNP 0004.scaffold00019 764157 1 G A - ReadM SNP 0004.scaffold00019 764179 1 A C - ReadM SNP 0004.scaffold00019 764555 1 T G - ReadM SNP 0004.scaffold00019 764576 1 G T - ReadM SNP 0004.scaffold00019 764578 1 G T - ReadM SNP 0004.scaffold00019 764680 1 C A - ReadM INDEL 0004.scaffold00019 764882 2 AA .. - ReadM INDEL 0004.scaffold00019 764948 1 T . - ReadM SNP 0004.scaffold00019 764966 1 G A - ReadM SNP 0004.scaffold00019 764972 1 C T - ReadM SNP 0004.scaffold00019 765018 1 T C - ReadM SNP 0004.scaffold00019 765079 1 T A - ReadM SNP 0004.scaffold00019 765081 1 T A - ReadM SNP 0004.scaffold00019 765104 1 G C - ReadM SNP 0004.scaffold00019 765194 1 G A - ReadM SNP 0004.scaffold00019 765302 1 G A - ReadM SNP 0004.scaffold00019 765364 1 G C - ReadM SNP 0004.scaffold00019 765425 1 A G - ReadM SNP 0004.scaffold00019 765555 1 C A - ReadM INDEL 0004.scaffold00019 765595 2 AA .. - ReadM SNP 0004.scaffold00019 765634 1 C G - ReadM SNP 0004.scaffold00019 765686 1 G C - ReadM SNP 0004.scaffold00019 765707 1 A T - ReadM SNP 0004.scaffold00019 765730 1 T A - ReadM SNP 0004.scaffold00019 765759 1 A C - ReadM SNP 0004.scaffold00019 765803 1 G A - ReadM SNP 0004.scaffold00019 765825 1 T A - ReadM SNP 0004.scaffold00019 766255 1 C G - ReadM SNP 0004.scaffold00019 766322 1 C A - ReadM SNP 0004.scaffold00019 766360 1 A G - ReadM SNP 0004.scaffold00019 766410 1 T A - ReadM SNP 0004.scaffold00019 766439 1 T A - ReadM SNP 0004.scaffold00019 766455 1 C T - ReadM SNP 0004.scaffold00019 766518 1 A G - ReadM SNP 0004.scaffold00019 766549 1 T A - ReadM SNP 0004.scaffold00019 766681 1 C A - ReadM SNP 0004.scaffold00019 766689 1 C T - ReadM SNP 0004.scaffold00019 766734 1 G T - ReadM SNP 0004.scaffold00019 766787 1 A T - ReadM SNP 0004.scaffold00019 766849 1 C T - ReadM SNP 0004.scaffold00019 767045 1 A G - ReadM SNP 0004.scaffold00019 767057 1 A T - ReadM SNP 0004.scaffold00019 767061 1 C T - ReadM SNP 0004.scaffold00019 767180 1 G T - Both SNP 0004.scaffold00019 767252 1 T C scaffold886 ScafM SNP 0004.scaffold00019 767307 1 G A scaffold886 Both SNP 0004.scaffold00019 767325 1 T C scaffold886 ScafM SNP 0004.scaffold00019 767524 1 T C scaffold51458 ScafM SNP 0004.scaffold00019 767593 1 C G scaffold51458 ScafM SNP 0004.scaffold00019 767649 1 G A scaffold51458 ScafM SNP 0004.scaffold00019 767655 1 A G scaffold51458 ScafM SNP 0004.scaffold00019 767675 1 T C scaffold51458 ScafM SNP 0004.scaffold00019 767682 1 C A scaffold51458 ScafM SNP 0004.scaffold00019 767702 1 T C scaffold51458 ScafM SNP 0004.scaffold00019 767735 1 C G scaffold51458 ScafM SNP 0004.scaffold00019 767737 1 T G scaffold51458 ScafM SNP 0004.scaffold00019 767898 1 A G scaffold51458 ScafM SNP 0004.scaffold00019 767925 2 TA AG scaffold51458 ReadM SNP 0004.scaffold00019 767926 1 A G - ScafM SNP 0004.scaffold00019 767931 1 A T scaffold51458 ScafM SNP 0004.scaffold00019 767938 1 G A scaffold51458 ScafM SNP 0004.scaffold00019 767950 1 T C scaffold51458 ScafM SNP 0004.scaffold00019 767954 1 T G scaffold51458 ScafM SNP 0004.scaffold00019 768006 1 G C scaffold51458 ScafM SNP 0004.scaffold00019 768015 1 A G scaffold51458 ScafM SNP 0004.scaffold00019 768042 1 A G scaffold51458 ScafM SNP 0004.scaffold00019 768049 1 A C scaffold51458 ScafM SNP 0004.scaffold00019 768114 1 C A scaffold51458 ScafM SNP 0004.scaffold00019 768121 1 G A scaffold51458 ScafM SNP 0004.scaffold00019 768124 1 G C scaffold51458 ScafM INDEL 0004.scaffold00019 768148 2 .. AA scaffold51458 ScafM INDEL 0004.scaffold00019 768166 3 ATT ... scaffold51458 ScafM INDEL 0004.scaffold00019 768172 1 T . scaffold51458 ScafM INDEL 0004.scaffold00019 768183 11 ........... GTCACGTGCTA scaffold51458 ScafM SNP 0004.scaffold00019 768215 1 T A scaffold51458 ScafM SNP 0004.scaffold00019 768222 1 T C scaffold51458 ScafM SNP 0004.scaffold00019 768235 1 C A scaffold51458 ReadM SNP 0004.scaffold00019 768324 1 C A - ReadM SNP 0004.scaffold00019 768366 1 T C - ReadM SNP 0004.scaffold00019 768411 1 T G - ReadM SNP 0004.scaffold00019 768425 1 A G - ScafM SNP 0004.scaffold00019 768585 1 A C scaffold886 Both SNP 0004.scaffold00019 768601 1 A G scaffold886 ReadM SNP 0004.scaffold00019 768821 1 A C - ReadM SNP 0004.scaffold00019 768834 1 G A - ReadM SNP 0004.scaffold00019 768886 1 C T - Both SNP 0004.scaffold00019 769010 1 C G scaffold886 Both SNP 0004.scaffold00019 769034 1 C A scaffold886 Both SNP 0004.scaffold00019 769056 1 A T scaffold886 Both SNP 0004.scaffold00019 769065 1 C T scaffold886 Both SNP 0004.scaffold00019 769100 1 G C scaffold886 Both SNP 0004.scaffold00019 769186 1 C T scaffold886 Both SNP 0004.scaffold00019 769263 1 A G scaffold886 Both SNP 0004.scaffold00019 769296 1 G A scaffold886 Both SNP 0004.scaffold00019 769354 1 A G scaffold886 Both SNP 0004.scaffold00019 769389 1 T A scaffold886 Both SNP 0004.scaffold00019 769431 1 T A scaffold886 Both SNP 0004.scaffold00019 769511 1 T C scaffold886 Both INDEL 0004.scaffold00019 769515 1 . G scaffold886 Both SNP 0004.scaffold00019 769539 1 G T scaffold886 Both INDEL 0004.scaffold00019 769661 1 . G scaffold886 ScafM SNP 0004.scaffold00019 769663 1 T G scaffold886 Both SNP 0004.scaffold00019 769706 1 C T scaffold886 ScafM INDEL 0004.scaffold00019 769721 2 .. GA scaffold886 ScafM SNP 0004.scaffold00019 769734 1 A G scaffold886 Both SNP 0004.scaffold00019 769778 1 T A scaffold886 ReadM SNP 0004.scaffold00019 769831 1 A G - ScafM INDEL 0004.scaffold00019 769831 1 A . scaffold886 ReadM SNP 0004.scaffold00019 769879 1 A G - Both INDEL 0004.scaffold00019 769982 3 ... CTT scaffold886 ReadM SNP 0004.scaffold00019 770496 1 T G - ReadM SNP 0004.scaffold00019 770523 1 T A - ReadM SNP 0004.scaffold00019 770544 1 C T - ReadM SNP 0004.scaffold00019 771062 1 C T - ScafM SNP 0004.scaffold00019 773578 1 A C scaffold53996 ScafM SNP 0004.scaffold00019 773607 1 A G scaffold53996 ScafM SNP 0004.scaffold00019 773613 1 C T scaffold53996 ScafM SNP 0004.scaffold00019 773622 1 A C scaffold53996 ScafM INDEL 0004.scaffold00019 773644 2 CT .. scaffold53996 ScafM SNP 0004.scaffold00019 773684 1 G A scaffold53996 ScafM SNP 0004.scaffold00019 773686 1 A T scaffold53996 ScafM SNP 0004.scaffold00019 773689 1 A G scaffold53996 ScafM SNP 0004.scaffold00019 773702 1 T G scaffold53996 ScafM INDEL 0004.scaffold00019 773713 1 G . scaffold53996 ScafM SNP 0004.scaffold00019 773732 1 C T scaffold53996 Both INDEL 0004.scaffold00019 773923 1 . G scaffold886 Both SNP 0004.scaffold00019 773928 1 T C scaffold886 Both SNP 0004.scaffold00019 773939 1 G T scaffold886 ReadM SNP 0004.scaffold00019 774039 1 A G - ReadM SNP 0004.scaffold00019 774363 1 T C - ReadM SNP 0004.scaffold00019 774594 1 T C - ReadM SNP 0004.scaffold00019 774944 1 T G - ScafM SNP 0004.scaffold00019 776503 1 A C scaffold36585 ScafM SNP 0004.scaffold00019 776543 1 T C scaffold36585 ScafM SNP 0004.scaffold00019 776561 1 C G scaffold36585 ScafM SNP 0004.scaffold00019 776578 3 TAA AGT scaffold36585 ScafM SNP 0004.scaffold00019 776584 1 C T scaffold36585 ScafM SNP 0004.scaffold00019 776587 2 TC CT scaffold36585 ScafM SNP 0004.scaffold00019 776711 1 G A scaffold36585 ScafM INDEL 0004.scaffold00019 776716 1 . T scaffold36585 ScafM SNP 0004.scaffold00019 776721 1 G A scaffold36585 ScafM SNP 0004.scaffold00019 776739 1 G C scaffold36585 ScafM SNP 0004.scaffold00019 776745 1 C T scaffold36585 ScafM SNP 0004.scaffold00019 776747 1 A G scaffold36585 ScafM INDEL 0004.scaffold00019 776753 5 ..... ACACA scaffold36585 ScafM INDEL 0004.scaffold00019 776760 1 . C scaffold36585 ScafM SNP 0004.scaffold00019 776775 1 C T scaffold36585 ScafM INDEL 0004.scaffold00019 776778 1 T . scaffold36585 ScafM SNP 0004.scaffold00019 776784 2 GC AA scaffold36585 ScafM INDEL 0004.scaffold00019 776789 2 AC .T scaffold36585 ScafM SNP 0004.scaffold00019 776793 3 ATT GAC scaffold36585 ScafM SNP 0004.scaffold00019 776816 1 A G scaffold36585 ScafM SNP 0004.scaffold00019 776828 1 C G scaffold36585 ScafM SNP 0004.scaffold00019 776833 1 A G scaffold36585 ScafM SNP 0004.scaffold00019 776837 1 G T scaffold36585 ScafM SNP 0004.scaffold00019 776853 1 A C scaffold36585 ScafM SNP 0004.scaffold00019 776861 1 C T scaffold36585 ScafM SNP 0004.scaffold00019 776869 1 G A scaffold36585 ScafM SNP 0004.scaffold00019 776876 1 C T scaffold36585 ScafM SNP 0004.scaffold00019 776909 1 T C scaffold36585 ScafM SNP 0004.scaffold00019 776916 1 G A scaffold36585 ScafM INDEL 0004.scaffold00019 776956 1 T . scaffold36585 ScafM SNP 0004.scaffold00019 776958 1 T A scaffold36585 ScafM SNP 0004.scaffold00019 776966 1 T C scaffold36585 ScafM SNP 0004.scaffold00019 776968 1 G C scaffold36585 ScafM SNP 0004.scaffold00019 776972 1 C T scaffold36585 ScafM SNP 0004.scaffold00019 791201 1 A T scaffold6686 ScafM SNP 0004.scaffold00019 791209 3 GGC ACT scaffold6686 ScafM SNP 0004.scaffold00019 791216 1 G A scaffold6686 ScafM SNP 0004.scaffold00019 791223 1 T C scaffold6686 ScafM SNP 0004.scaffold00019 791226 1 C G scaffold6686 ScafM SNP 0004.scaffold00019 791243 1 G C scaffold6686 ScafM SNP 0004.scaffold00019 791253 1 A G scaffold6686 ScafM INDEL 0004.scaffold00019 791265 2 .C TT scaffold6686 ScafM SNP 0004.scaffold00019 791269 1 T C scaffold6686 ScafM SNP 0004.scaffold00019 791271 1 A G scaffold6686 ScafM SNP 0004.scaffold00019 791280 1 G C scaffold6686 ScafM SNP 0004.scaffold00019 791285 1 T C scaffold6686 ReadM SNP 0004.scaffold00019 792706 1 A T - ReadM SNP 0004.scaffold00019 792757 1 G A - ScafM SNP 0004.scaffold00019 795131 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795139 1 T G scaffold2895 ScafM SNP 0004.scaffold00019 795149 3 ATG GGC scaffold2895 ScafM INDEL 0004.scaffold00019 795162 2 .. GA scaffold2895 ScafM INDEL 0004.scaffold00019 795164 1 . A scaffold2895 ScafM INDEL 0004.scaffold00019 795165 1 . T scaffold2895 ScafM SNP 0004.scaffold00019 795186 1 G A scaffold2895 ScafM INDEL 0004.scaffold00019 795189 1 T . scaffold2895 ScafM SNP 0004.scaffold00019 795197 1 T C scaffold2895 ScafM SNP 0004.scaffold00019 795217 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795221 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795223 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795239 1 C A scaffold2895 ScafM SNP 0004.scaffold00019 795249 1 G T scaffold2895 ScafM SNP 0004.scaffold00019 795308 1 G C scaffold2895 ScafM SNP 0004.scaffold00019 795310 1 C T scaffold2895 ScafM SNP 0004.scaffold00019 795319 1 G A scaffold2895 ScafM SNP 0004.scaffold00019 795331 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795356 1 T A scaffold2895 ScafM INDEL 0004.scaffold00019 795370 1 . G scaffold2895 ScafM SNP 0004.scaffold00019 795372 1 C T scaffold2895 ScafM INDEL 0004.scaffold00019 795375 1 A . scaffold2895 ScafM SNP 0004.scaffold00019 795380 1 C G scaffold2895 ScafM SNP 0004.scaffold00019 795389 1 G C scaffold2895 ScafM SNP 0004.scaffold00019 795392 3 CAT TCG scaffold2895 ScafM SNP 0004.scaffold00019 795398 1 C T scaffold2895 ScafM SNP 0004.scaffold00019 795403 2 TT CG scaffold2895 ScafM INDEL 0004.scaffold00019 795413 1 . A scaffold2895 ScafM SNP 0004.scaffold00019 795422 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795431 1 T C scaffold2895 ScafM SNP 0004.scaffold00019 795437 1 T C scaffold2895 ScafM SNP 0004.scaffold00019 795445 1 T C scaffold2895 ScafM SNP 0004.scaffold00019 795459 1 G T scaffold2895 ScafM INDEL 0004.scaffold00019 795468 4 GGCC .... scaffold2895 ScafM SNP 0004.scaffold00019 795478 2 AG CC scaffold2895 ScafM INDEL 0004.scaffold00019 795482 2 .. AC scaffold2895 ScafM SNP 0004.scaffold00019 795507 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795510 1 A C scaffold2895 ScafM SNP 0004.scaffold00019 795521 1 A T scaffold2895 ScafM SNP 0004.scaffold00019 795558 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795564 1 A G scaffold2895 ScafM SNP 0004.scaffold00019 795578 2 GT AC scaffold2895 ScafM SNP 0004.scaffold00019 795584 1 A T scaffold2895 ScafM SNP 0004.scaffold00019 795591 1 A C scaffold2895 ScafM SNP 0004.scaffold00019 795601 2 TA CG scaffold2895 ScafM SNP 0004.scaffold00019 795606 1 C A scaffold2895 ScafM SNP 0004.scaffold00019 795616 1 T G scaffold2895 ReadM SNP 0004.scaffold00019 798155 1 A C - ReadM SNP 0004.scaffold00019 798376 1 C A - ReadM SNP 0004.scaffold00019 798404 1 C T - Both SNP 0004.scaffold00019 798434 1 T G scaffold886 Both SNP 0004.scaffold00019 798465 1 A C scaffold886 Both SNP 0004.scaffold00019 798492 1 G A scaffold886 ScafM SNP 0004.scaffold00019 798498 1 G A scaffold886 ScafM SNP 0004.scaffold00019 798503 1 A G scaffold886 Both SNP 0004.scaffold00019 798618 1 C G scaffold886 Both SNP 0004.scaffold00019 798642 1 C G scaffold886 Both SNP 0004.scaffold00019 798662 1 T G scaffold886 Both SNP 0004.scaffold00019 798668 1 A G scaffold886 Both SNP 0004.scaffold00019 798722 1 G A scaffold886 ScafM INDEL 0004.scaffold00019 798769 10 .......... AGAATGACGA scaffold886 ScafM SNP 0004.scaffold00019 798786 1 G A scaffold886 ScafM SNP 0004.scaffold00019 798813 1 C T scaffold886 ScafM SNP 0004.scaffold00019 798848 1 G A scaffold886 ScafM SNP 0004.scaffold00019 798851 1 C G scaffold886 ScafM SNP 0004.scaffold00019 798869 1 A G scaffold886 Both SNP 0004.scaffold00019 798885 1 A G scaffold886 Both SNP 0004.scaffold00019 798927 1 A G scaffold886 Both SNP 0004.scaffold00019 798985 2 TA CG scaffold886 Both SNP 0004.scaffold00019 799024 1 G T scaffold886 Both INDEL 0004.scaffold00019 799063 1 T . scaffold886 Both SNP 0004.scaffold00019 799187 1 A G scaffold886 Both SNP 0004.scaffold00019 799242 1 A G scaffold886 Both SNP 0004.scaffold00019 799274 1 G A scaffold886 ScafM SNP 0004.scaffold00019 799293 1 A G scaffold886 ScafM SNP 0004.scaffold00019 799343 1 C G scaffold886 ScafM SNP 0004.scaffold00019 799357 1 T A scaffold886 Both SNP 0004.scaffold00019 799401 1 A T scaffold886 Both SNP 0004.scaffold00019 799524 1 T A scaffold886 Both SNP 0004.scaffold00019 799530 1 C T scaffold886 Both SNP 0004.scaffold00019 799564 1 T G scaffold886 Both SNP 0004.scaffold00019 799589 1 A G scaffold886 Both SNP 0004.scaffold00019 799680 1 A T scaffold886 Both SNP 0004.scaffold00019 799761 1 G A scaffold886 Both SNP 0004.scaffold00019 799772 1 T G scaffold886 Both SNP 0004.scaffold00019 799775 1 G A scaffold886 ScafM SNP 0004.scaffold00019 799817 1 C G scaffold886 Both SNP 0004.scaffold00019 799842 1 A G scaffold886 Both SNP 0004.scaffold00019 799863 1 T C scaffold886 Both SNP 0004.scaffold00019 799885 1 G A scaffold886 Both SNP 0004.scaffold00019 799914 1 A G scaffold886 ScafM SNP 0004.scaffold00019 799953 1 A C scaffold886 ScafM SNP 0004.scaffold00019 799962 1 T C scaffold886 ScafM SNP 0004.scaffold00019 799968 1 T G scaffold886 ScafM SNP 0004.scaffold00019 799977 1 G T scaffold886 ScafM SNP 0004.scaffold00019 800001 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800026 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800045 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800064 1 G A scaffold886 ScafM SNP 0004.scaffold00019 800091 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800095 1 A T scaffold886 ScafM SNP 0004.scaffold00019 800107 1 A G scaffold886 Both SNP 0004.scaffold00019 800131 1 T G scaffold886 Both SNP 0004.scaffold00019 800147 1 T C scaffold886 Both SNP 0004.scaffold00019 800186 1 T C scaffold886 Both SNP 0004.scaffold00019 800237 1 A C scaffold886 Both SNP 0004.scaffold00019 800268 1 C T scaffold886 Both SNP 0004.scaffold00019 800295 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800326 1 C G scaffold886 ScafM SNP 0004.scaffold00019 800337 1 A C scaffold886 ScafM SNP 0004.scaffold00019 800351 1 G A scaffold886 Both SNP 0004.scaffold00019 800371 1 C A scaffold886 Both SNP 0004.scaffold00019 800385 1 G A scaffold886 Both SNP 0004.scaffold00019 800439 1 C T scaffold886 Both SNP 0004.scaffold00019 800469 1 T C scaffold886 ScafM SNP 0004.scaffold00019 800477 1 G A scaffold886 ScafM SNP 0004.scaffold00019 800496 1 G A scaffold886 ScafM SNP 0004.scaffold00019 800503 1 T C scaffold886 ScafM SNP 0004.scaffold00019 800505 1 G C scaffold886 Both SNP 0004.scaffold00019 800543 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800572 1 A C scaffold886 ScafM SNP 0004.scaffold00019 800578 1 G A scaffold886 ScafM SNP 0004.scaffold00019 800612 1 G C scaffold886 ScafM SNP 0004.scaffold00019 800616 1 A G scaffold886 ScafM SNP 0004.scaffold00019 800638 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800643 2 CG TA scaffold886 ScafM SNP 0004.scaffold00019 800713 1 C A scaffold886 ScafM SNP 0004.scaffold00019 800733 2 CT TA scaffold886 ScafM SNP 0004.scaffold00019 800743 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800762 1 C T scaffold886 ScafM SNP 0004.scaffold00019 800787 1 A C scaffold886 ScafM SNP 0004.scaffold00019 800794 1 G A scaffold886 ScafM SNP 0004.scaffold00019 800796 1 G T scaffold886 Both SNP 0004.scaffold00019 800821 1 G A scaffold886 Both SNP 0004.scaffold00019 800849 1 C A scaffold886 Both SNP 0004.scaffold00019 800904 1 T C scaffold886 Both SNP 0004.scaffold00019 800975 1 C T scaffold886 Both SNP 0004.scaffold00019 801012 1 T C scaffold886 Both SNP 0004.scaffold00019 801112 1 A C scaffold886 Both SNP 0004.scaffold00019 801138 1 G A scaffold886 Both SNP 0004.scaffold00019 801148 1 A G scaffold886 Both SNP 0004.scaffold00019 801304 1 G A scaffold886 Both SNP 0004.scaffold00019 801311 1 G A scaffold886 Both SNP 0004.scaffold00019 801324 1 T C scaffold886 Both SNP 0004.scaffold00019 801387 1 A C scaffold886 Both SNP 0004.scaffold00019 801401 1 C A scaffold886 Both SNP 0004.scaffold00019 801410 1 T C scaffold886 ScafM INDEL 0004.scaffold00019 801453 1 . A scaffold886 ScafM INDEL 0004.scaffold00019 801454 2 .. GA scaffold886 ScafM SNP 0004.scaffold00019 801465 1 C A scaffold886 Both SNP 0004.scaffold00019 801477 1 C A scaffold886 Both SNP 0004.scaffold00019 801675 1 G T scaffold886 Both SNP 0004.scaffold00019 801680 1 A G scaffold886 Both SNP 0004.scaffold00019 801735 1 C T scaffold886 Both SNP 0004.scaffold00019 801747 1 A T scaffold886 Both SNP 0004.scaffold00019 801895 1 T G scaffold886 Both SNP 0004.scaffold00019 801921 1 C T scaffold886 ScafM SNP 0004.scaffold00019 802049 1 C T scaffold886 ScafM SNP 0004.scaffold00019 802051 1 G C scaffold886 Both SNP 0004.scaffold00019 802088 1 C T scaffold886 Both SNP 0004.scaffold00019 802101 1 T A scaffold886 Both SNP 0004.scaffold00019 802306 1 A C scaffold886 Both SNP 0004.scaffold00019 802342 1 G A scaffold886 Both SNP 0004.scaffold00019 802347 1 T C scaffold886 ScafM SNP 0004.scaffold00019 802373 1 C T scaffold886 ScafM SNP 0004.scaffold00019 802413 1 T C scaffold886 ScafM SNP 0004.scaffold00019 802486 1 G A scaffold886 ScafM SNP 0004.scaffold00019 802498 1 T C scaffold886 Both SNP 0004.scaffold00019 802527 1 T C scaffold886 ScafM SNP 0004.scaffold00019 802548 1 T C scaffold886 Both SNP 0004.scaffold00019 802584 1 A G scaffold886 ScafM SNP 0004.scaffold00019 802592 1 A G scaffold886 ScafM SNP 0004.scaffold00019 802606 1 G A scaffold886 ScafM SNP 0004.scaffold00019 802671 1 G A scaffold886 Both SNP 0004.scaffold00019 802704 1 T C scaffold886 ScafM SNP 0004.scaffold00019 802717 1 T C scaffold886 ScafM SNP 0004.scaffold00019 802770 1 G A scaffold886 ScafM SNP 0004.scaffold00019 802779 1 G A scaffold886 ScafM SNP 0004.scaffold00019 802815 1 T A scaffold886 Both SNP 0004.scaffold00019 802917 1 C T scaffold886 Both SNP 0004.scaffold00019 802941 1 C T scaffold886 Both SNP 0004.scaffold00019 802950 1 C G scaffold886 ScafM SNP 0004.scaffold00019 802991 1 C T scaffold886 ScafM SNP 0004.scaffold00019 803008 1 G A scaffold886 ScafM SNP 0004.scaffold00019 803023 1 T A scaffold886 ScafM SNP 0004.scaffold00019 803028 1 A G scaffold886 ReadM INDEL 0004.scaffold00019 803070 1 . T - ScafM INDEL 0004.scaffold00019 803070 2 .G TA scaffold886 Both SNP 0004.scaffold00019 803124 1 G A scaffold886 Both SNP 0004.scaffold00019 803154 1 A C scaffold886 Both SNP 0004.scaffold00019 803173 1 T C scaffold886 ScafM SNP 0004.scaffold00019 803221 2 TG CA scaffold886 Both SNP 0004.scaffold00019 803280 1 T G scaffold886 ReadM SNP 0004.scaffold00019 803359 1 A T - ReadM SNP 0004.scaffold00019 803442 1 G T - ReadM SNP 0004.scaffold00019 803462 1 G T - ReadM SNP 0004.scaffold00019 803502 1 C G - ReadM SNP 0004.scaffold00019 803540 1 G A - ReadM SNP 0004.scaffold00019 803616 1 G A - ReadM SNP 0004.scaffold00019 803672 1 A T - ReadM SNP 0004.scaffold00019 803737 1 G A - ReadM SNP 0004.scaffold00019 803752 1 A G - ReadM SNP 0004.scaffold00019 803875 1 A C - ReadM SNP 0004.scaffold00019 803885 1 A C - ReadM SNP 0004.scaffold00019 803903 1 G T - ReadM SNP 0004.scaffold00019 804280 1 G A - ReadM SNP 0004.scaffold00019 804338 1 G A - ReadM SNP 0004.scaffold00019 804434 1 G A - ReadM SNP 0004.scaffold00019 804451 1 A C - ReadM SNP 0004.scaffold00019 804508 1 C T - ReadM SNP 0004.scaffold00019 804526 1 T C - ReadM SNP 0004.scaffold00019 804564 1 A G - ReadM SNP 0004.scaffold00019 804604 1 G T - ReadM SNP 0004.scaffold00019 804610 1 C T - ReadM SNP 0004.scaffold00019 804711 1 T A - ReadM SNP 0004.scaffold00019 804728 1 C T - ReadM SNP 0004.scaffold00019 804730 1 A G - ReadM SNP 0004.scaffold00019 804964 1 T G - ReadM INDEL 0004.scaffold00019 805066 1 . G - ReadM SNP 0004.scaffold00019 805177 1 C T - ReadM SNP 0004.scaffold00019 805354 1 C T - ReadM SNP 0004.scaffold00019 805391 1 C T - Both SNP 0004.scaffold00019 805478 1 C T scaffold886 Both SNP 0004.scaffold00019 805486 1 C T scaffold886 Both SNP 0004.scaffold00019 805537 1 A T scaffold886 ReadM SNP 0004.scaffold00019 805836 1 A G - ReadM SNP 0004.scaffold00019 805841 1 A G - ReadM SNP 0004.scaffold00019 805996 1 T C - ReadM SNP 0004.scaffold00019 806028 1 G C - ReadM SNP 0004.scaffold00019 806123 1 A T - ReadM SNP 0004.scaffold00019 806175 1 A G - ReadM SNP 0004.scaffold00019 806229 1 G A - ReadM SNP 0004.scaffold00019 806255 1 G C - Both SNP 0004.scaffold00019 806320 1 T C scaffold886 Both SNP 0004.scaffold00019 806331 1 G A scaffold886 ScafM SNP 0004.scaffold00019 806349 1 C G scaffold886 ScafM SNP 0004.scaffold00019 806356 1 T G scaffold886 ReadM SNP 0004.scaffold00019 806464 1 T C - ScafM INDEL 0004.scaffold00019 806600 1 C . scaffold886 ScafM SNP 0004.scaffold00019 806624 1 T A scaffold886 ScafM SNP 0004.scaffold00019 806627 1 C T scaffold886 ScafM SNP 0004.scaffold00019 806677 1 A G scaffold886 ScafM SNP 0004.scaffold00019 806836 1 T C scaffold886 ScafM SNP 0004.scaffold00019 806838 1 A G scaffold886 ScafM SNP 0004.scaffold00019 806874 1 G A scaffold886 ScafM SNP 0004.scaffold00019 806880 1 A C scaffold886 ScafM SNP 0005.scaffold00021 1017 1 G C scaffold3374 ScafM SNP 0005.scaffold00021 1072 1 T C scaffold3374 ScafM SNP 0005.scaffold00021 1518 1 C T scaffold3374 ScafM SNP 0005.scaffold00021 1575 1 G A scaffold3374 ScafM INDEL 0005.scaffold00021 2871 69 ..................................................................... TTTTATGTGGAATTTATTATAATGCCCTTCATTTAGCTCTATAAATATACATGAAATGATATTCGATCT scaffold1086 ScafM SNP 0005.scaffold00021 2884 1 A T scaffold1086 Both SNP 0005.scaffold00021 2928 1 G T scaffold1086 ScafM SNP 0005.scaffold00021 3011 2 AA TT scaffold1086 ScafM SNP 0005.scaffold00021 3071 1 G C scaffold1086 ScafM SNP 0005.scaffold00021 3122 2 CA TC scaffold1086 ScafM SNP 0005.scaffold00021 3128 1 A T scaffold1086 ScafM SNP 0005.scaffold00021 3176 2 AT GG scaffold1086 ScafM SNP 0005.scaffold00021 3230 1 T G scaffold1086 ScafM SNP 0005.scaffold00021 3357 1 C T scaffold1086 ScafM INDEL 0005.scaffold00021 3423 1 . T scaffold1086 ScafM SNP 0005.scaffold00021 3598 1 A T scaffold1086 ScafM SNP 0005.scaffold00021 3616 1 C T scaffold1086 ScafM SNP 0005.scaffold00021 3627 1 C A scaffold1086 ScafM SNP 0005.scaffold00021 3641 1 A G scaffold1086 Both SNP 0005.scaffold00021 3781 1 T A scaffold1086 ScafM SNP 0005.scaffold00021 3832 1 G C scaffold1086 ScafM SNP 0005.scaffold00021 3874 1 C A scaffold1086 ScafM SNP 0005.scaffold00021 3983 1 A C scaffold1086 ScafM SNP 0005.scaffold00021 3999 1 C T scaffold1086 ScafM INDEL 0005.scaffold00021 4022 3 ATT ... scaffold1086 ScafM SNP 0005.scaffold00021 4131 1 C A scaffold1086 ScafM SNP 0005.scaffold00021 4187 1 C T scaffold1086 ReadM SNP 0005.scaffold00021 4794 1 A G - ReadM SNP 0005.scaffold00021 4910 1 C A - ReadM SNP 0005.scaffold00021 4935 1 A G - ReadM SNP 0005.scaffold00021 4954 1 C A - ReadM SNP 0005.scaffold00021 5200 1 T G - ReadM SNP 0005.scaffold00021 5498 1 G A - ReadM SNP 0005.scaffold00021 5531 1 T C - ScafM SNP 0005.scaffold00021 6264 1 C T scaffold3374 ScafM SNP 0005.scaffold00021 6335 1 G A scaffold3374 Both SNP 0005.scaffold00021 6584 1 C T scaffold3374 Both SNP 0005.scaffold00021 6625 1 A T scaffold3374 Both SNP 0005.scaffold00021 6698 1 T A scaffold3374 ScafM SNP 0005.scaffold00021 6831 1 G C scaffold3374 ScafM SNP 0005.scaffold00021 7190 1 G A scaffold3374 ScafM INDEL 0005.scaffold00021 7230 1 . C scaffold3374 ReadM INDEL 0005.scaffold00021 7350 1 T . - ScafM SNP 0005.scaffold00021 7677 1 G A scaffold3374 ScafM INDEL 0005.scaffold00021 7682 1 A . scaffold3374 ScafM SNP 0005.scaffold00021 7796 1 C T scaffold3374 ReadM SNP 0005.scaffold00021 8490 1 A C - Both SNP 0005.scaffold00021 8627 1 A G scaffold3374 ScafM INDEL 0005.scaffold00021 9358 26 GGGGAGGGTGCAAAAACTGTGGGGTT .......................... scaffold3374 Both SNP 0005.scaffold00021 11098 1 C T scaffold3374 ReadM SNP 0005.scaffold00021 12967 1 T C - Both SNP 0005.scaffold00021 13586 1 G T scaffold3374 Both SNP 0005.scaffold00021 13745 1 C T scaffold3374 ReadM SNP 0005.scaffold00021 14600 1 C T - ReadM SNP 0005.scaffold00021 16328 1 G A - Both SNP 0005.scaffold00021 20431 1 C G scaffold3374 Both SNP 0005.scaffold00021 20473 1 G A scaffold3374 Both SNP 0005.scaffold00021 21203 1 T C scaffold3374 ReadM INDEL 0005.scaffold00021 21598 1 G . - Both SNP 0005.scaffold00021 21674 1 T G scaffold3374 Both INDEL 0005.scaffold00021 21762 1 . G scaffold3374 ReadM SNP 0005.scaffold00021 22086 1 T C - ReadM SNP 0005.scaffold00021 22937 1 A G - ReadM SNP 0005.scaffold00021 23221 1 T C - Both SNP 0005.scaffold00021 23555 1 G A scaffold3374 Both SNP 0005.scaffold00021 23683 1 C A scaffold3374 Both SNP 0005.scaffold00021 23727 1 T C scaffold3374 Both SNP 0005.scaffold00021 23946 1 C A scaffold3374 Both SNP 0005.scaffold00021 23973 1 C A scaffold3374 Both SNP 0005.scaffold00021 24138 1 G A scaffold3374 Both SNP 0005.scaffold00021 24199 1 G C scaffold3374 Both INDEL 0005.scaffold00021 24202 1 . T scaffold3374 ReadM SNP 0005.scaffold00021 24364 1 T C - ReadM SNP 0005.scaffold00021 24500 1 T C - ReadM SNP 0005.scaffold00021 25553 1 A G - ScafM SNP 0005.scaffold00021 26442 1 G A scaffold3374 ReadM SNP 0005.scaffold00021 27894 1 A T - ReadM SNP 0005.scaffold00021 27917 1 A G - ReadM SNP 0005.scaffold00021 28231 1 A T - ReadM SNP 0005.scaffold00021 28888 1 G A - ReadM INDEL 0005.scaffold00021 29836 1 C . - ReadM INDEL 0005.scaffold00021 29837 1 A . - ReadM SNP 0005.scaffold00021 30109 1 G A - ReadM SNP 0005.scaffold00021 30963 1 C T - ReadM SNP 0005.scaffold00021 31059 1 T C - ReadM SNP 0005.scaffold00021 31066 1 A G - ReadM SNP 0005.scaffold00021 32512 1 T C - ReadM SNP 0005.scaffold00021 32766 1 A G - ReadM SNP 0005.scaffold00021 32854 1 C T - ReadM SNP 0005.scaffold00021 32964 1 C T - ReadM SNP 0005.scaffold00021 33198 1 T C - ReadM SNP 0005.scaffold00021 33319 1 C T - Both SNP 0005.scaffold00021 33617 1 C G scaffold3374 Both INDEL 0005.scaffold00021 33643 2 TA .. scaffold3374 ReadM SNP 0005.scaffold00021 34188 1 C A - ReadM SNP 0005.scaffold00021 36387 1 T G - ReadM SNP 0005.scaffold00021 36963 1 G A - ReadM SNP 0005.scaffold00021 37464 1 G A - ReadM SNP 0005.scaffold00021 37627 1 G A - ReadM SNP 0005.scaffold00021 37751 1 C T - ReadM SNP 0005.scaffold00021 38596 1 G C - ReadM SNP 0005.scaffold00021 39283 1 G A - Both SNP 0005.scaffold00021 39550 1 C T scaffold3374 ReadM SNP 0005.scaffold00021 40472 1 C T - ReadM SNP 0005.scaffold00021 40735 1 C T - ReadM SNP 0005.scaffold00021 42623 1 C A - ReadM INDEL 0005.scaffold00021 43104 1 . T - ReadM INDEL 0005.scaffold00021 43354 1 . T - ReadM INDEL 0005.scaffold00021 43518 1 C . - ReadM SNP 0005.scaffold00021 43625 1 A G - ReadM SNP 0005.scaffold00021 43903 1 G A - ReadM SNP 0005.scaffold00021 43931 1 A T - ReadM SNP 0005.scaffold00021 44965 1 T C - ReadM SNP 0005.scaffold00021 45141 1 G A - ReadM SNP 0005.scaffold00021 45366 1 G A - ReadM SNP 0005.scaffold00021 46394 1 A T - ReadM SNP 0005.scaffold00021 46500 1 A G - ReadM SNP 0005.scaffold00021 46749 1 G A - ReadM SNP 0005.scaffold00021 46869 1 G T - ReadM SNP 0005.scaffold00021 47184 1 C T - ReadM SNP 0005.scaffold00021 47195 1 A G - ReadM SNP 0005.scaffold00021 47751 1 T C - ReadM SNP 0005.scaffold00021 47768 1 A G - ReadM SNP 0005.scaffold00021 48233 1 T C - ReadM SNP 0005.scaffold00021 49216 1 G T - ReadM SNP 0005.scaffold00021 49279 1 T A - ReadM SNP 0005.scaffold00021 49816 1 A G - Both SNP 0005.scaffold00021 50005 1 A G scaffold3374 ReadM SNP 0005.scaffold00021 50261 1 C A - ReadM SNP 0005.scaffold00021 51008 1 C T - ReadM SNP 0005.scaffold00021 51074 1 T A - ReadM SNP 0005.scaffold00021 51108 1 A G - ScafM SNP 0005.scaffold00021 51391 1 G A scaffold3374 ReadM SNP 0005.scaffold00021 54822 1 G T - ScafM INDEL 0005.scaffold00021 55942 3 ... TAT scaffold69231 ReadM SNP 0005.scaffold00021 56878 1 T C - ReadM SNP 0005.scaffold00021 57130 1 G T - ReadM SNP 0005.scaffold00021 57599 1 G A - ReadM SNP 0005.scaffold00021 58075 1 C T - ReadM SNP 0005.scaffold00021 58812 1 G A - ScafM SNP 0005.scaffold00021 59027 2 TT AC scaffold73132 ScafM INDEL 0005.scaffold00021 59871 1 . A scaffold73132 ScafM INDEL 0005.scaffold00021 59899 1 . C scaffold73132 ScafM INDEL 0005.scaffold00021 59923 8 ........ AGTTTCTT scaffold73132 ReadM SNP 0005.scaffold00021 60209 1 A G - Both SNP 0005.scaffold00021 61694 1 C T scaffold53960 Both INDEL 0005.scaffold00021 62241 3 ... TTG scaffold53960 Both SNP 0005.scaffold00021 62473 1 T C scaffold53960 Both SNP 0005.scaffold00021 62484 1 C T scaffold53960 ScafM SNP 0005.scaffold00021 62524 1 C G scaffold53960 ScafM SNP 0005.scaffold00021 62527 1 T C scaffold53960 ScafM SNP 0005.scaffold00021 62530 1 G A scaffold53960 ScafM SNP 0005.scaffold00021 62532 1 A G scaffold53960 Both SNP 0005.scaffold00021 62934 1 C T scaffold53960 ReadM SNP 0005.scaffold00021 63459 1 C G - ReadM SNP 0005.scaffold00021 63609 1 T C - ReadM SNP 0005.scaffold00021 64408 1 C T - ReadM SNP 0005.scaffold00021 64460 1 A G - Both SNP 0005.scaffold00021 64743 1 A G scaffold58798 ScafM INDEL 0005.scaffold00021 64832 20 .................... ATTTAGCAGTCAAAAGCTTT scaffold58798 ReadM SNP 0005.scaffold00021 65832 1 T C - ReadM SNP 0005.scaffold00021 66737 1 T A - ScafM INDEL 0005.scaffold00021 66833 24 CCACCACCCACTGCTGAACCACCG ........................ scaffold12831 ScafM INDEL 0005.scaffold00021 66858 1 C . scaffold12831 ScafM SNP 0005.scaffold00021 66870 1 G A scaffold12831 ReadM SNP 0005.scaffold00021 67534 1 C A - ReadM SNP 0005.scaffold00021 68315 1 G C - ReadM SNP 0005.scaffold00021 69816 1 C T - Both SNP 0005.scaffold00021 70088 1 A G scaffold53869 ScafM INDEL 0005.scaffold00021 70450 2 .. AA scaffold53869 Both SNP 0005.scaffold00021 71004 1 C T scaffold53869 ReadM SNP 0005.scaffold00021 72383 1 T G - ReadM SNP 0005.scaffold00021 73642 1 T C - ReadM SNP 0005.scaffold00021 75513 1 C A - ReadM SNP 0005.scaffold00021 75956 1 A G - ReadM SNP 0005.scaffold00021 77419 1 C T - ReadM SNP 0005.scaffold00021 79008 1 A C - ReadM SNP 0005.scaffold00021 81052 1 T G - ReadM SNP 0005.scaffold00021 81933 1 T C - ReadM SNP 0005.scaffold00021 82295 1 C T - ScafM SNP 0005.scaffold00021 83326 1 A T scaffold17630 Both SNP 0005.scaffold00021 83519 1 T G scaffold17630 Both SNP 0005.scaffold00021 83634 1 A C scaffold17630 ScafM SNP 0005.scaffold00021 83713 1 C G scaffold17630 Both SNP 0005.scaffold00021 83854 1 G A scaffold17630 Both SNP 0005.scaffold00021 83912 1 C T scaffold17630 Both SNP 0005.scaffold00021 83948 1 T A scaffold17630 Both SNP 0005.scaffold00021 84089 1 G A scaffold17630 Both SNP 0005.scaffold00021 84117 1 G A scaffold17630 ReadM SNP 0005.scaffold00021 84834 1 G A - ReadM SNP 0005.scaffold00021 85083 2 AA GC - ReadM SNP 0005.scaffold00021 85092 1 C G - ReadM SNP 0005.scaffold00021 85313 1 C A - Both SNP 0005.scaffold00021 85324 1 G A scaffold17630 Both SNP 0005.scaffold00021 85622 1 A T scaffold17630 ScafM INDEL 0005.scaffold00021 85698 2 CC .. scaffold17630 ScafM INDEL 0005.scaffold00021 85704 1 C . scaffold17630 Both SNP 0005.scaffold00021 86005 1 T G scaffold17630 ReadM SNP 0005.scaffold00021 86388 1 C T - Both SNP 0005.scaffold00021 86530 1 A G scaffold17630 Both SNP 0005.scaffold00021 87335 1 A T scaffold17630 Both SNP 0005.scaffold00021 87515 1 T A scaffold17630 Both SNP 0005.scaffold00021 87527 1 G A scaffold17630 Both SNP 0005.scaffold00021 87654 1 T C scaffold17630 Both SNP 0005.scaffold00021 87710 1 C T scaffold17630 Both SNP 0005.scaffold00021 88147 1 A G scaffold17630 Both INDEL 0005.scaffold00021 89611 1 A . scaffold17630 Both SNP 0005.scaffold00021 89633 1 A T scaffold17630 Both SNP 0005.scaffold00021 90025 1 A G scaffold17630 ReadM SNP 0005.scaffold00021 90582 1 A G - ReadM SNP 0005.scaffold00021 90719 1 C G - ScafM SNP 0005.scaffold00021 91111 1 C G scaffold7496 ScafM SNP 0005.scaffold00021 91113 1 T C scaffold7496 ScafM SNP 0005.scaffold00021 91115 1 G A scaffold7496 ScafM SNP 0005.scaffold00021 91302 1 G A scaffold7496 ScafM SNP 0005.scaffold00021 91370 1 G A scaffold7496 ReadM SNP 0005.scaffold00021 92375 1 T C - ReadM SNP 0005.scaffold00021 92816 1 A C - Both SNP 0005.scaffold00021 93093 1 G A scaffold18751 ReadM SNP 0005.scaffold00021 93351 1 G T - ReadM SNP 0005.scaffold00021 95279 1 T G - Both SNP 0005.scaffold00021 95364 1 G C scaffold18751 ReadM SNP 0005.scaffold00021 95469 1 C T - Both SNP 0005.scaffold00021 95636 1 G A scaffold18751 ReadM SNP 0005.scaffold00021 96801 1 C A - Both SNP 0005.scaffold00021 97232 1 A T scaffold18751 Both SNP 0005.scaffold00021 97742 1 T C scaffold18751 Both SNP 0005.scaffold00021 97807 1 C T scaffold18751 Both SNP 0005.scaffold00021 98515 1 C T scaffold18751 Both SNP 0005.scaffold00021 98926 1 A G scaffold18751 ReadM SNP 0005.scaffold00021 99011 1 C T - ScafM INDEL 0005.scaffold00021 100378 3 ... TAA scaffold18751 ScafM INDEL 0005.scaffold00021 100989 14 .............. CTAAGTTGATTTAA scaffold18751 ScafM INDEL 0005.scaffold00021 101421 14 .............. TGCTGAAAATTTTT scaffold18751 Both SNP 0005.scaffold00021 102211 1 C G scaffold18751 Both SNP 0005.scaffold00021 102405 1 T C scaffold18751 Both SNP 0005.scaffold00021 103196 1 C T scaffold18751 ReadM SNP 0005.scaffold00021 103720 1 G A - Both SNP 0005.scaffold00021 103982 1 A T scaffold18751 ReadM SNP 0005.scaffold00021 104254 1 T A - ReadM SNP 0005.scaffold00021 104484 1 C T - ReadM INDEL 0005.scaffold00021 104509 2 AT .. - ReadM SNP 0005.scaffold00021 105145 1 T C - ReadM SNP 0005.scaffold00021 105260 1 C A - ReadM SNP 0005.scaffold00021 105559 1 A G - ReadM SNP 0005.scaffold00021 106547 1 A G - ReadM SNP 0005.scaffold00021 106891 1 T C - ReadM SNP 0005.scaffold00021 106984 1 T G - ReadM SNP 0005.scaffold00021 108406 1 A C - ReadM SNP 0005.scaffold00021 108435 1 T C - ReadM SNP 0005.scaffold00021 108473 1 C T - ScafM SNP 0005.scaffold00021 108938 1 C T scaffold18751 ScafM SNP 0005.scaffold00021 108944 1 A G scaffold18751 ScafM SNP 0005.scaffold00021 108951 1 A G scaffold18751 ScafM SNP 0005.scaffold00021 108972 1 G T scaffold18751 ScafM SNP 0005.scaffold00021 109064 1 G A scaffold18751 Both SNP 0005.scaffold00021 109978 1 A G scaffold18751 ScafM INDEL 0005.scaffold00021 110359 6 ...... AAAAAA scaffold18751 Both SNP 0005.scaffold00021 111689 1 T G scaffold18751 ScafM INDEL 0005.scaffold00021 113353 19 ................... AGATGGACAAAAAAGCAAA scaffold18751 ScafM INDEL 0005.scaffold00021 113715 1 A . scaffold18751 Both SNP 0005.scaffold00021 114889 1 C T scaffold18751 Both SNP 0005.scaffold00021 115067 1 G A scaffold18751 ReadM SNP 0005.scaffold00021 116178 1 C T - ReadM SNP 0005.scaffold00021 116496 1 C T - Both SNP 0005.scaffold00021 119886 1 C A scaffold18751 Both SNP 0005.scaffold00021 120204 1 A G scaffold18751 Both SNP 0005.scaffold00021 120786 1 A T scaffold18751 ScafM INDEL 0005.scaffold00021 121643 2 AA .. scaffold18751 ScafM INDEL 0005.scaffold00021 121663 2 .. AG scaffold18751 ScafM SNP 0005.scaffold00021 121804 1 G T scaffold18751 ScafM INDEL 0005.scaffold00021 121949 1 T . scaffold18751 ReadM SNP 0005.scaffold00021 125963 1 T C - ReadM SNP 0005.scaffold00021 126194 1 G A - ReadM SNP 0005.scaffold00021 126408 1 T C - ReadM SNP 0005.scaffold00021 126641 1 T C - ReadM SNP 0005.scaffold00021 130436 1 A C - ReadM SNP 0005.scaffold00021 130513 1 G A - ReadM SNP 0005.scaffold00021 130647 1 A T - ReadM SNP 0005.scaffold00021 131028 1 A G - ReadM SNP 0005.scaffold00021 131482 1 T G - ReadM SNP 0005.scaffold00021 131484 1 C G - ReadM SNP 0005.scaffold00021 131956 1 A C - Both SNP 0005.scaffold00021 132571 1 A G scaffold4136 ReadM SNP 0005.scaffold00021 133129 1 C G - ReadM SNP 0005.scaffold00021 133413 1 G T - ReadM SNP 0005.scaffold00021 133586 1 C A - ReadM SNP 0005.scaffold00021 134095 1 G A - ReadM SNP 0005.scaffold00021 134545 1 T A - ReadM SNP 0005.scaffold00021 134549 1 G A - ReadM SNP 0005.scaffold00021 134649 1 A G - ReadM SNP 0005.scaffold00021 134806 1 G A - ReadM SNP 0005.scaffold00021 134935 1 A G - ReadM SNP 0005.scaffold00021 135405 1 A T - ReadM SNP 0005.scaffold00021 135825 1 A G - ReadM SNP 0005.scaffold00021 136601 1 G A - ReadM SNP 0005.scaffold00021 137071 1 T C - ReadM SNP 0005.scaffold00021 137095 1 C A - ReadM SNP 0005.scaffold00021 137160 1 G T - ReadM SNP 0005.scaffold00021 137249 1 T C - ReadM SNP 0005.scaffold00021 137446 1 T C - ReadM SNP 0005.scaffold00021 137637 1 C A - ReadM SNP 0005.scaffold00021 137839 1 A G - ReadM SNP 0005.scaffold00021 138170 1 C G - ReadM SNP 0005.scaffold00021 138812 1 C T - ReadM SNP 0005.scaffold00021 138940 1 C A - ReadM SNP 0005.scaffold00021 139046 1 A C - ReadM SNP 0005.scaffold00021 140108 1 A G - ReadM SNP 0005.scaffold00021 140221 1 A G - ReadM SNP 0005.scaffold00021 140227 1 A G - ReadM SNP 0005.scaffold00021 141285 1 A G - ReadM SNP 0005.scaffold00021 141487 1 T A - ReadM SNP 0005.scaffold00021 142012 1 C T - ReadM SNP 0005.scaffold00021 142395 1 A G - ReadM SNP 0005.scaffold00021 143493 1 C T - ReadM SNP 0005.scaffold00021 143567 1 A G - ReadM SNP 0005.scaffold00021 143781 1 T C - ReadM SNP 0005.scaffold00021 143999 1 G T - ReadM SNP 0005.scaffold00021 144319 1 A T - ReadM SNP 0005.scaffold00021 144539 2 AT GG - ReadM SNP 0005.scaffold00021 144603 1 C T - ReadM SNP 0005.scaffold00021 144822 1 A C - ReadM SNP 0005.scaffold00021 144904 1 C T - ScafM SNP 0005.scaffold00021 145092 1 C T scaffold8671 ScafM SNP 0005.scaffold00021 145146 1 A C scaffold8671 ScafM SNP 0005.scaffold00021 145152 1 A G scaffold8671 ScafM INDEL 0005.scaffold00021 146330 1 . C scaffold4136 ScafM SNP 0005.scaffold00021 146333 1 T G scaffold4136 ScafM SNP 0005.scaffold00021 146349 1 G T scaffold4136 ScafM INDEL 0005.scaffold00021 146361 1 A . scaffold4136 ScafM SNP 0005.scaffold00021 146365 1 A G scaffold4136 ScafM SNP 0005.scaffold00021 146369 2 AT TC scaffold4136 ScafM SNP 0005.scaffold00021 146395 1 A G scaffold4136 ScafM SNP 0005.scaffold00021 146933 1 A G scaffold4136 ScafM SNP 0005.scaffold00021 147322 1 A C scaffold4136 ReadM SNP 0005.scaffold00021 148879 1 T C - ReadM SNP 0005.scaffold00021 149204 1 C T - ReadM INDEL 0005.scaffold00021 149392 1 . 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G - ReadM SNP 0006.scaffold00022 17401 1 C A - Both SNP 0006.scaffold00022 17733 1 A G scaffold7008 ReadM SNP 0006.scaffold00022 17783 1 A G - ReadM INDEL 0006.scaffold00022 17864 1 . A - Both SNP 0006.scaffold00022 17936 1 G A scaffold7008 Both SNP 0006.scaffold00022 17953 1 A G scaffold7008 ReadM INDEL 0006.scaffold00022 18146 1 A . - ReadM SNP 0006.scaffold00022 18273 1 A T - ReadM SNP 0006.scaffold00022 18292 1 T C - ReadM SNP 0006.scaffold00022 18831 1 G A - ReadM SNP 0006.scaffold00022 18896 1 G A - ReadM INDEL 0006.scaffold00022 18941 1 . G - ReadM SNP 0006.scaffold00022 19195 1 G T - ReadM SNP 0006.scaffold00022 19312 1 C T - Both SNP 0006.scaffold00022 19362 1 A G scaffold7008 Both SNP 0006.scaffold00022 19405 1 C G scaffold7008 Both SNP 0006.scaffold00022 19419 1 C T scaffold7008 Both SNP 0006.scaffold00022 19578 1 C A scaffold7008 Both SNP 0006.scaffold00022 19649 1 C G scaffold7008 Both SNP 0006.scaffold00022 19714 1 T A scaffold7008 Both SNP 0006.scaffold00022 19776 1 T A scaffold7008 Both SNP 0006.scaffold00022 19785 1 A T scaffold7008 ScafM INDEL 0006.scaffold00022 19854 2 .. AA scaffold7008 Both SNP 0006.scaffold00022 19935 1 G A scaffold7008 Both SNP 0006.scaffold00022 19979 1 A T scaffold7008 Both SNP 0006.scaffold00022 20110 1 A G scaffold7008 ScafM SNP 0006.scaffold00022 20353 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 20356 1 C T scaffold7008 ScafM INDEL 0006.scaffold00022 20365 2 .C TT scaffold7008 ScafM INDEL 0006.scaffold00022 20373 1 . A scaffold7008 ScafM SNP 0006.scaffold00022 20387 1 G T scaffold7008 ScafM SNP 0006.scaffold00022 20496 2 TC CT scaffold7008 ScafM INDEL 0006.scaffold00022 20632 4 ...A TGTT scaffold7008 Both SNP 0006.scaffold00022 20675 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 20831 1 G T scaffold7008 ScafM INDEL 0006.scaffold00022 20836 2 GT .. scaffold7008 ScafM SNP 0006.scaffold00022 20845 1 A G scaffold7008 ScafM INDEL 0006.scaffold00022 20852 1 T . scaffold7008 ScafM SNP 0006.scaffold00022 20858 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 20874 1 C T scaffold7008 ScafM INDEL 0006.scaffold00022 20880 4 .... TATA scaffold7008 ScafM SNP 0006.scaffold00022 20882 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 20888 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 20915 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 20918 2 CG TA scaffold7008 ScafM SNP 0006.scaffold00022 20952 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 20959 1 C T scaffold7008 ScafM INDEL 0006.scaffold00022 21119 3 ... TTG scaffold7008 ScafM INDEL 0006.scaffold00022 21157 17 ................. AGTTTTAAATAATAGAT scaffold7008 ScafM SNP 0006.scaffold00022 21191 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 21206 1 A C scaffold7008 ScafM SNP 0006.scaffold00022 21213 1 A T scaffold7008 ScafM SNP 0006.scaffold00022 21216 1 G T scaffold7008 ScafM SNP 0006.scaffold00022 21232 1 A T scaffold7008 ScafM SNP 0006.scaffold00022 21249 1 G T scaffold7008 ScafM INDEL 0006.scaffold00022 21257 28 ............................ AACATGCTGTCCCCGTCAAAAAAAAAAA scaffold7008 Both SNP 0006.scaffold00022 21350 1 A G scaffold7008 ScafM INDEL 0006.scaffold00022 21431 8 ........ TAGTACAC scaffold7008 Both SNP 0006.scaffold00022 21475 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 21526 1 C A scaffold7008 ScafM SNP 0006.scaffold00022 21555 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 21581 1 A C scaffold7008 ScafM SNP 0006.scaffold00022 21587 1 T G scaffold7008 ScafM SNP 0006.scaffold00022 21760 1 A G scaffold7008 ScafM SNP 0006.scaffold00022 21790 1 A C scaffold7008 ScafM SNP 0006.scaffold00022 21801 1 C A scaffold7008 ScafM SNP 0006.scaffold00022 21820 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 21847 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 21860 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 21874 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 21879 1 T C scaffold7008 ScafM INDEL 0006.scaffold00022 21888 4 GTAC .... scaffold7008 ScafM SNP 0006.scaffold00022 21929 2 CT TC scaffold7008 ScafM SNP 0006.scaffold00022 21934 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 22118 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 22139 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 22166 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 22178 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 22191 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 22233 1 C G scaffold7008 ScafM SNP 0006.scaffold00022 22251 1 C A scaffold7008 ScafM SNP 0006.scaffold00022 22264 1 T C scaffold7008 ScafM INDEL 0006.scaffold00022 22288 7 ACTTATA ....... scaffold7008 ScafM SNP 0006.scaffold00022 22305 1 T G scaffold7008 ScafM SNP 0006.scaffold00022 22322 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 22333 1 T A scaffold7008 ScafM SNP 0006.scaffold00022 22357 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 22377 1 T C scaffold7008 ScafM INDEL 0006.scaffold00022 22384 2 GT .C scaffold7008 ScafM SNP 0006.scaffold00022 22396 1 T C scaffold7008 Both SNP 0006.scaffold00022 22399 1 G A scaffold7008 Both SNP 0006.scaffold00022 22749 1 G A scaffold7008 Both SNP 0006.scaffold00022 22838 1 A G scaffold7008 Both SNP 0006.scaffold00022 22948 1 A T scaffold7008 Both SNP 0006.scaffold00022 23096 1 T C scaffold7008 Both SNP 0006.scaffold00022 23173 1 A G scaffold7008 Both SNP 0006.scaffold00022 23247 1 T A scaffold7008 Both SNP 0006.scaffold00022 23429 1 A T scaffold7008 Both SNP 0006.scaffold00022 23763 1 A G scaffold7008 Both SNP 0006.scaffold00022 23864 1 A G scaffold7008 Both SNP 0006.scaffold00022 23961 1 G A scaffold7008 Both SNP 0006.scaffold00022 24070 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 24486 2 CT TG scaffold7008 ScafM INDEL 0006.scaffold00022 24498 8 ........ TAGAGAAT scaffold7008 Both INDEL 0006.scaffold00022 24547 1 . C scaffold7008 ScafM SNP 0006.scaffold00022 24624 1 A G scaffold7008 Both SNP 0006.scaffold00022 24762 1 T G scaffold7008 Both SNP 0006.scaffold00022 24784 1 C A scaffold7008 Both SNP 0006.scaffold00022 24849 1 A T scaffold7008 Both SNP 0006.scaffold00022 24921 1 T A scaffold7008 Both SNP 0006.scaffold00022 24952 1 A C scaffold7008 Both SNP 0006.scaffold00022 24956 1 G A scaffold7008 Both SNP 0006.scaffold00022 24969 1 C G scaffold7008 Both SNP 0006.scaffold00022 24993 1 T C scaffold7008 Both SNP 0006.scaffold00022 25209 1 G C scaffold7008 ScafM INDEL 0006.scaffold00022 25265 7 CATTGAG ....... scaffold7008 Both SNP 0006.scaffold00022 25425 1 A G scaffold7008 Both SNP 0006.scaffold00022 25440 1 G C scaffold7008 Both SNP 0006.scaffold00022 25478 1 T A scaffold7008 ScafM INDEL 0006.scaffold00022 25496 5 ..... TTTCC scaffold7008 ScafM INDEL 0006.scaffold00022 25500 1 . G scaffold7008 Both SNP 0006.scaffold00022 25522 1 C T scaffold7008 ReadM SNP 0006.scaffold00022 25574 1 G A - ReadM SNP 0006.scaffold00022 25602 1 C G - ReadM SNP 0006.scaffold00022 25642 1 C T - ReadM SNP 0006.scaffold00022 25668 1 T A - ReadM SNP 0006.scaffold00022 25675 1 T C - Both SNP 0006.scaffold00022 26018 1 T G scaffold7008 ReadM SNP 0006.scaffold00022 26188 1 T G - ReadM SNP 0006.scaffold00022 26953 1 A G - ReadM SNP 0006.scaffold00022 28139 1 C T - Both SNP 0006.scaffold00022 28203 1 A T scaffold7008 Both SNP 0006.scaffold00022 28242 1 A G scaffold7008 ReadM SNP 0006.scaffold00022 28700 1 T C - Both SNP 0006.scaffold00022 31017 1 G T scaffold7008 ReadM SNP 0006.scaffold00022 31381 1 T C - ReadM INDEL 0006.scaffold00022 31413 1 . G - ScafM INDEL 0006.scaffold00022 31470 1 . C scaffold7008 ScafM SNP 0006.scaffold00022 31472 1 T G scaffold7008 Both SNP 0006.scaffold00022 31554 1 C T scaffold7008 Both SNP 0006.scaffold00022 31697 1 T A scaffold7008 Both INDEL 0006.scaffold00022 31830 1 . T scaffold7008 Both SNP 0006.scaffold00022 32042 1 C T scaffold7008 ReadM SNP 0006.scaffold00022 32274 1 C T - Both SNP 0006.scaffold00022 32985 1 C T scaffold7008 Both SNP 0006.scaffold00022 33235 1 G A scaffold7008 Both SNP 0006.scaffold00022 33247 1 A G scaffold7008 Both SNP 0006.scaffold00022 33671 1 A G scaffold7008 ScafM SNP 0006.scaffold00022 33914 1 G A scaffold7008 ScafM INDEL 0006.scaffold00022 34012 3 ... ACT scaffold7008 ScafM SNP 0006.scaffold00022 34065 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 37765 1 T G scaffold7008 ScafM SNP 0006.scaffold00022 37964 1 C T scaffold7008 Both SNP 0006.scaffold00022 38088 1 G T scaffold7008 Both SNP 0006.scaffold00022 38647 1 C T scaffold7008 Both SNP 0006.scaffold00022 38873 1 A G scaffold7008 Both SNP 0006.scaffold00022 39243 1 T C scaffold7008 Both SNP 0006.scaffold00022 39539 1 A T scaffold7008 Both SNP 0006.scaffold00022 39613 1 C A scaffold7008 Both SNP 0006.scaffold00022 39713 1 T G scaffold7008 Both SNP 0006.scaffold00022 40029 1 A T scaffold7008 ScafM INDEL 0006.scaffold00022 40053 6 ...... TAGATT scaffold7008 Both SNP 0006.scaffold00022 40211 1 G A scaffold7008 Both SNP 0006.scaffold00022 40367 1 C G scaffold7008 Both SNP 0006.scaffold00022 40385 1 C G scaffold7008 ScafM SNP 0006.scaffold00022 40581 1 G A scaffold7008 Both SNP 0006.scaffold00022 40590 1 T G scaffold7008 Both SNP 0006.scaffold00022 40614 1 C A scaffold7008 Both INDEL 0006.scaffold00022 40659 1 T . scaffold7008 Both SNP 0006.scaffold00022 40852 1 C A scaffold7008 ScafM SNP 0006.scaffold00022 40860 1 C T scaffold7008 ReadM SNP 0006.scaffold00022 40894 1 A G - Both SNP 0006.scaffold00022 41180 1 C T scaffold7008 Both SNP 0006.scaffold00022 41185 1 C T scaffold7008 Both SNP 0006.scaffold00022 41368 1 G A scaffold7008 Both SNP 0006.scaffold00022 41481 1 T A scaffold7008 ScafM INDEL 0006.scaffold00022 41581 8 ........ CTTAAGCA scaffold7008 ScafM SNP 0006.scaffold00022 41629 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 41655 1 T G scaffold7008 ScafM SNP 0006.scaffold00022 41659 1 T G scaffold7008 ScafM INDEL 0006.scaffold00022 41666 3 ... AAT scaffold7008 ScafM INDEL 0006.scaffold00022 41669 1 . T scaffold7008 Both SNP 0006.scaffold00022 41866 1 T C scaffold7008 Both SNP 0006.scaffold00022 41920 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 42048 2 AA GG scaffold7008 Both SNP 0006.scaffold00022 42120 1 A T scaffold7008 Both SNP 0006.scaffold00022 42145 1 T C scaffold7008 Both INDEL 0006.scaffold00022 42186 1 T . scaffold7008 Both SNP 0006.scaffold00022 42202 1 C T scaffold7008 ReadM SNP 0006.scaffold00022 42361 1 G C - ReadM SNP 0006.scaffold00022 42420 1 T C - ReadM SNP 0006.scaffold00022 42442 1 A G - ReadM SNP 0006.scaffold00022 42497 1 A G - ReadM SNP 0006.scaffold00022 42706 1 G A - ReadM SNP 0006.scaffold00022 42744 1 G T - ReadM INDEL 0006.scaffold00022 42837 1 C . - ReadM SNP 0006.scaffold00022 43034 1 A C - ReadM SNP 0006.scaffold00022 43111 1 T C - ReadM SNP 0006.scaffold00022 43149 1 A G - ReadM SNP 0006.scaffold00022 43304 1 C A - ReadM SNP 0006.scaffold00022 43449 1 A G - ReadM SNP 0006.scaffold00022 43602 1 C T - ReadM SNP 0006.scaffold00022 43682 1 A G - ReadM INDEL 0006.scaffold00022 43794 1 T . - Both SNP 0006.scaffold00022 43935 1 C T scaffold7008 Both SNP 0006.scaffold00022 44034 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 44065 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 44071 1 A T scaffold7008 ScafM SNP 0006.scaffold00022 44153 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 44181 1 G A scaffold7008 ScafM SNP 0006.scaffold00022 46252 1 T C scaffold7008 ScafM INDEL 0006.scaffold00022 46301 1 A . scaffold7008 ScafM SNP 0006.scaffold00022 46303 1 T C scaffold7008 ScafM SNP 0006.scaffold00022 46347 1 C T scaffold7008 ScafM INDEL 0006.scaffold00022 46645 1 . A scaffold7008 Both SNP 0006.scaffold00022 46729 1 T G scaffold7008 Both SNP 0006.scaffold00022 46839 1 C T scaffold7008 Both SNP 0006.scaffold00022 46888 1 A G scaffold7008 Both SNP 0006.scaffold00022 47025 1 T C scaffold7008 Both SNP 0006.scaffold00022 47063 1 C T scaffold7008 ScafM SNP 0006.scaffold00022 47111 1 T C scaffold7008 ReadM SNP 0006.scaffold00022 47258 1 A T - Both SNP 0006.scaffold00022 47370 1 C A scaffold7008 ScafM INDEL 0006.scaffold00022 47512 6 ...... TAGTAC scaffold7008 ScafM SNP 0006.scaffold00022 47526 1 C T scaffold7008 ScafM INDEL 0006.scaffold00022 47531 3 ATA ... scaffold7008 Both SNP 0006.scaffold00022 47547 1 G T scaffold7008 Both SNP 0006.scaffold00022 47627 1 G A scaffold7008 Both INDEL 0006.scaffold00022 47697 1 . T scaffold7008 Both SNP 0006.scaffold00022 47908 1 C G scaffold7008 Both SNP 0006.scaffold00022 47918 1 G A scaffold7008 Both SNP 0006.scaffold00022 47949 1 C T scaffold7008 Both SNP 0006.scaffold00022 48072 1 G T scaffold7008 Both SNP 0006.scaffold00022 48125 1 G A scaffold7008 ScafM INDEL 0006.scaffold00022 48157 1 . T scaffold7008 ReadM INDEL 0006.scaffold00022 48172 1 . G - ReadM SNP 0006.scaffold00022 48354 1 T C - ReadM SNP 0006.scaffold00022 48434 1 T A - ReadM SNP 0006.scaffold00022 48477 1 C G - ReadM SNP 0006.scaffold00022 48584 1 A G - ReadM SNP 0006.scaffold00022 48659 1 T A - ReadM SNP 0006.scaffold00022 48809 1 A G - ReadM SNP 0006.scaffold00022 48818 1 T C - Both SNP 0006.scaffold00022 48857 1 C A scaffold7008 ReadM SNP 0006.scaffold00022 49038 1 T C - ReadM SNP 0006.scaffold00022 49051 1 C A - ReadM SNP 0006.scaffold00022 49909 1 A G - ReadM SNP 0006.scaffold00022 50147 1 T G - ReadM SNP 0006.scaffold00022 50152 1 A T - ReadM SNP 0006.scaffold00022 50317 1 C G - ScafM SNP 0006.scaffold00022 50445 1 A T scaffold7008 ReadM INDEL 0007.scaffold00024 485 1 . A - ScafM SNP 0007.scaffold00024 1004 1 A G scaffold16432 ScafM SNP 0007.scaffold00024 1021 1 A G scaffold16432 ScafM SNP 0007.scaffold00024 1054 2 TA CG scaffold16432 ScafM INDEL 0007.scaffold00024 1063 1 . A scaffold16432 ScafM SNP 0007.scaffold00024 1142 1 G A scaffold16432 ScafM INDEL 0007.scaffold00024 1152 5 ..... TTCTG scaffold16432 ScafM SNP 0007.scaffold00024 1155 1 C T scaffold16432 ScafM SNP 0007.scaffold00024 1179 1 A C scaffold16432 ScafM SNP 0007.scaffold00024 1234 1 C A scaffold16432 ReadM SNP 0007.scaffold00024 1892 1 A G - ReadM SNP 0007.scaffold00024 1972 1 A G - ReadM SNP 0007.scaffold00024 2021 1 C T - ReadM SNP 0007.scaffold00024 2275 1 T G - ReadM SNP 0007.scaffold00024 3431 1 T C - ReadM SNP 0007.scaffold00024 4833 1 T C - ReadM SNP 0007.scaffold00024 4914 1 G A - ReadM SNP 0007.scaffold00024 5360 1 C A - ReadM SNP 0007.scaffold00024 5567 1 T G - ReadM SNP 0007.scaffold00024 6146 1 A G - ReadM SNP 0007.scaffold00024 6166 1 G A - ReadM SNP 0007.scaffold00024 6444 1 A G - ReadM SNP 0007.scaffold00024 7001 1 G C - ReadM SNP 0007.scaffold00024 7009 1 T G - ReadM SNP 0007.scaffold00024 7024 1 A C - ReadM SNP 0007.scaffold00024 7152 1 G A - ReadM SNP 0007.scaffold00024 7182 1 A G - ReadM SNP 0007.scaffold00024 7364 1 C T - ReadM SNP 0007.scaffold00024 7377 1 A C - ReadM SNP 0007.scaffold00024 7580 1 G A - ReadM SNP 0007.scaffold00024 7744 1 C T - ReadM SNP 0007.scaffold00024 7810 1 A G - ReadM SNP 0007.scaffold00024 8325 1 A G - ReadM SNP 0007.scaffold00024 8431 1 T C - ReadM SNP 0007.scaffold00024 8613 1 T C - ReadM SNP 0007.scaffold00024 8749 1 A C - ReadM SNP 0007.scaffold00024 8804 1 G T - ReadM SNP 0007.scaffold00024 9591 1 C G - ReadM SNP 0007.scaffold00024 9690 1 T C - ReadM SNP 0007.scaffold00024 9762 1 A T - ReadM SNP 0007.scaffold00024 9813 1 A G - ReadM SNP 0007.scaffold00024 10147 1 G A - ReadM SNP 0007.scaffold00024 10238 1 A C - ReadM SNP 0007.scaffold00024 10302 1 G A - ReadM SNP 0007.scaffold00024 10427 1 C T - ReadM SNP 0007.scaffold00024 10484 1 G A - Both SNP 0007.scaffold00024 11978 1 C G scaffold6302 ReadM SNP 0007.scaffold00024 12174 1 A G - ReadM SNP 0007.scaffold00024 12446 1 G A - ScafM SNP 0007.scaffold00024 12613 1 C T scaffold16432 ScafM SNP 0007.scaffold00024 12637 1 T C scaffold16432 Both SNP 0007.scaffold00024 12645 1 T A scaffold16432 ReadM SNP 0007.scaffold00024 12707 1 A T - ReadM SNP 0007.scaffold00024 12758 1 T A - ReadM SNP 0007.scaffold00024 13073 1 A G - ScafM SNP 0007.scaffold00024 13884 1 C T scaffold16432 ScafM SNP 0007.scaffold00024 13900 1 C T scaffold16432 ScafM INDEL 0007.scaffold00024 13934 7 ....... TTGTAAG scaffold16432 ScafM INDEL 0007.scaffold00024 13936 2 .. TT scaffold16432 ScafM INDEL 0007.scaffold00024 13937 5 ..... TTTAA scaffold16432 ScafM INDEL 0007.scaffold00024 13939 2 .. TT scaffold16432 ScafM INDEL 0007.scaffold00024 13940 1 . C scaffold16432 ScafM INDEL 0007.scaffold00024 13942 2 .. GC scaffold16432 ScafM INDEL 0007.scaffold00024 13943 1 . G scaffold16432 ScafM INDEL 0007.scaffold00024 13944 3 ... TTC scaffold16432 ScafM INDEL 0007.scaffold00024 13949 10 .......... TGTAACTGTA scaffold16432 ScafM INDEL 0007.scaffold00024 13951 12 ............ TGTCTAGCAAAA scaffold16432 ScafM INDEL 0007.scaffold00024 13953 5 ..... GTGGG scaffold16432 ScafM SNP 0007.scaffold00024 13969 1 G A scaffold16432 ScafM SNP 0007.scaffold00024 13978 1 G A scaffold16432 ScafM SNP 0007.scaffold00024 13985 1 A T scaffold16432 ScafM SNP 0007.scaffold00024 13990 1 T C scaffold16432 ScafM SNP 0007.scaffold00024 14013 1 G C scaffold16432 ScafM SNP 0007.scaffold00024 14030 1 T C scaffold16432 ScafM SNP 0007.scaffold00024 14044 1 G T scaffold16432 ScafM SNP 0007.scaffold00024 14046 2 TT GA scaffold16432 ScafM SNP 0007.scaffold00024 14098 1 A G scaffold16432 ScafM INDEL 0007.scaffold00024 14102 2 .. GG scaffold16432 Both SNP 0007.scaffold00024 14129 1 G A scaffold16432 ScafM SNP 0007.scaffold00024 14213 1 T A scaffold16432 ScafM SNP 0007.scaffold00024 14219 1 G A scaffold16432 ScafM SNP 0007.scaffold00024 14251 1 G C scaffold16432 ScafM INDEL 0007.scaffold00024 14301 1 T . scaffold16432 ScafM SNP 0007.scaffold00024 14318 1 G A scaffold16432 Both SNP 0007.scaffold00024 14332 1 C T scaffold16432 ScafM SNP 0007.scaffold00024 14378 1 T C scaffold16432 ScafM SNP 0007.scaffold00024 14390 1 G T scaffold16432 ScafM SNP 0007.scaffold00024 14399 1 A G scaffold16432 ScafM SNP 0007.scaffold00024 14473 1 A G scaffold16432 ScafM SNP 0007.scaffold00024 14595 1 G C scaffold16432 ScafM SNP 0007.scaffold00024 14675 1 A G scaffold16432 ScafM INDEL 0007.scaffold00024 14701 1 . G scaffold16432 ScafM SNP 0007.scaffold00024 14743 1 A G scaffold16432 ScafM SNP 0007.scaffold00024 14787 1 G A scaffold16432 ScafM SNP 0007.scaffold00024 14792 1 T A scaffold16432 ScafM SNP 0007.scaffold00024 14807 1 C T scaffold16432 ReadM SNP 0007.scaffold00024 14948 1 T C - ReadM SNP 0007.scaffold00024 15218 1 C A - ReadM SNP 0007.scaffold00024 15347 1 T G - ReadM SNP 0007.scaffold00024 15423 1 T G - ScafM INDEL 0007.scaffold00024 15850 1 . C scaffold2921 ScafM SNP 0007.scaffold00024 15853 1 G A scaffold2921 ScafM SNP 0007.scaffold00024 15856 1 C A scaffold2921 ScafM SNP 0007.scaffold00024 15887 1 A G scaffold2921 ScafM INDEL 0007.scaffold00024 15896 1 T . scaffold2921 ScafM SNP 0007.scaffold00024 15899 1 A C scaffold2921 ReadM SNP 0007.scaffold00024 15905 1 A G - ScafM SNP 0007.scaffold00024 15905 1 A C scaffold2921 ScafM SNP 0007.scaffold00024 15932 1 T C scaffold2921 ScafM INDEL 0007.scaffold00024 15943 1 G . scaffold2921 ScafM SNP 0007.scaffold00024 16245 1 T G scaffold2921 ScafM SNP 0007.scaffold00024 16251 1 A G scaffold2921 ScafM SNP 0007.scaffold00024 16258 1 G A scaffold2921 ScafM SNP 0007.scaffold00024 16262 1 G T scaffold2921 ScafM SNP 0007.scaffold00024 16267 1 T G scaffold2921 ScafM SNP 0007.scaffold00024 16273 1 A G scaffold2921 ScafM INDEL 0007.scaffold00024 16279 1 T . scaffold2921 ScafM INDEL 0007.scaffold00024 16289 3 AAT ... scaffold2921 ScafM SNP 0007.scaffold00024 16303 2 TA AC scaffold2921 ScafM SNP 0007.scaffold00024 16314 1 C A scaffold2921 ScafM SNP 0007.scaffold00024 16343 1 T A scaffold2921 ScafM SNP 0007.scaffold00024 16351 1 C G scaffold2921 ScafM SNP 0007.scaffold00024 16359 3 CTC TAA scaffold2921 ScafM SNP 0007.scaffold00024 16364 1 C T scaffold2921 ScafM SNP 0007.scaffold00024 16373 1 A C scaffold2921 ScafM SNP 0007.scaffold00024 16401 1 A T scaffold2921 ScafM SNP 0007.scaffold00024 16413 1 A T scaffold2921 ScafM SNP 0007.scaffold00024 16419 2 AT CC scaffold2921 ScafM SNP 0007.scaffold00024 16430 1 A G scaffold2921 ScafM SNP 0007.scaffold00024 16434 1 A C scaffold2921 ScafM SNP 0007.scaffold00024 16436 1 C A scaffold2921 ScafM SNP 0007.scaffold00024 16449 1 T G scaffold2921 ScafM SNP 0007.scaffold00024 16451 1 G A scaffold2921 ScafM SNP 0007.scaffold00024 16464 1 A G scaffold2921 ScafM INDEL 0007.scaffold00024 16477 1 . G scaffold2921 ScafM SNP 0007.scaffold00024 16479 1 A T scaffold2921 ScafM INDEL 0007.scaffold00024 16481 2 .. CG scaffold2921 ScafM SNP 0007.scaffold00024 16488 1 T A scaffold2921 ScafM SNP 0007.scaffold00024 16508 1 T C scaffold2921 ScafM SNP 0007.scaffold00024 16511 1 T C scaffold2921 ScafM SNP 0007.scaffold00024 16517 1 A C scaffold2921 ScafM SNP 0007.scaffold00024 16525 1 A G scaffold2921 ScafM SNP 0007.scaffold00024 16537 2 CT TC scaffold2921 ReadM SNP 0007.scaffold00024 16538 1 T C - ScafM SNP 0007.scaffold00024 16552 1 T C scaffold2921 ScafM SNP 0007.scaffold00024 16557 1 G A scaffold2921 ScafM SNP 0007.scaffold00024 16567 1 C T scaffold2921 ScafM SNP 0007.scaffold00024 16579 1 T C scaffold2921 ScafM SNP 0007.scaffold00024 16586 1 C A scaffold2921 ScafM SNP 0007.scaffold00024 16590 1 G A scaffold2921 ReadM SNP 0007.scaffold00024 17386 1 C A - ReadM SNP 0007.scaffold00024 17421 1 C T - ReadM SNP 0007.scaffold00024 17580 1 T C - ReadM SNP 0007.scaffold00024 17640 1 G A - ReadM SNP 0007.scaffold00024 17897 1 A G - ReadM SNP 0007.scaffold00024 17919 1 A T - ScafM SNP 0007.scaffold00024 18258 1 C T scaffold57337 ScafM SNP 0007.scaffold00024 18291 1 A G scaffold57337 ScafM SNP 0007.scaffold00024 18314 1 T C scaffold57337 ScafM SNP 0007.scaffold00024 18385 1 C A scaffold57337 ScafM SNP 0007.scaffold00024 18400 1 T C scaffold57337 ScafM SNP 0007.scaffold00024 18407 1 T A scaffold57337 ScafM SNP 0007.scaffold00024 18429 1 A G scaffold57337 ScafM INDEL 0007.scaffold00024 18530 1 . A scaffold57337 ScafM SNP 0007.scaffold00024 18634 1 C T scaffold57337 ScafM SNP 0007.scaffold00024 20009 1 A G scaffold44164 ScafM SNP 0007.scaffold00024 20034 1 A T scaffold44164 ScafM SNP 0007.scaffold00024 20056 1 A G scaffold44164 ScafM SNP 0007.scaffold00024 20059 1 T C scaffold44164 ReadM SNP 0007.scaffold00024 20357 1 C T - ReadM SNP 0007.scaffold00024 20737 1 A G - ReadM SNP 0007.scaffold00024 20789 1 C A - ScafM SNP 0007.scaffold00024 20979 1 G C scaffold44164 ReadM SNP 0007.scaffold00024 21580 1 G T - ReadM SNP 0007.scaffold00024 22239 1 G C - ReadM SNP 0007.scaffold00024 22249 1 T C - ReadM SNP 0007.scaffold00024 22252 1 C G - ScafM SNP 0007.scaffold00024 22339 1 A C scaffold36893 ScafM SNP 0007.scaffold00024 22390 1 C A scaffold36893 ScafM SNP 0007.scaffold00024 22449 1 G A scaffold36893 ScafM INDEL 0007.scaffold00024 22621 1 A . scaffold36893 Both INDEL 0007.scaffold00024 22632 1 A . scaffold36893 Both SNP 0007.scaffold00024 22899 1 G A scaffold36893 ScafM INDEL 0007.scaffold00024 22965 5 ..... GTAAA scaffold36893 ScafM INDEL 0007.scaffold00024 22966 1 . G scaffold36893 ReadM SNP 0007.scaffold00024 23455 1 A G - ReadM SNP 0007.scaffold00024 23612 1 T A - Both SNP 0007.scaffold00024 23822 1 T A scaffold36893 Both SNP 0007.scaffold00024 23857 1 A G scaffold36893 ScafM SNP 0007.scaffold00024 23893 1 C T scaffold36893 ScafM SNP 0007.scaffold00024 24079 1 C T scaffold36893 Both INDEL 0007.scaffold00024 24315 1 T . scaffold36893 ScafM INDEL 0007.scaffold00024 24385 2 .. AA scaffold36893 ScafM SNP 0007.scaffold00024 24387 1 T A scaffold36893 ReadM SNP 0007.scaffold00024 25535 1 C T - ScafM INDEL 0007.scaffold00024 26225 1 . A scaffold29147 ScafM SNP 0007.scaffold00024 26261 1 A G scaffold29147 ScafM SNP 0007.scaffold00024 26375 1 T C scaffold29147 ReadM SNP 0007.scaffold00024 26532 1 T C - ReadM SNP 0007.scaffold00024 26541 1 T C - ScafM SNP 0007.scaffold00024 26850 1 C T scaffold29147 ReadM SNP 0007.scaffold00024 27104 1 G A - Both SNP 0007.scaffold00024 28111 1 A G scaffold29147 ReadM SNP 0007.scaffold00024 28136 1 C T - ReadM SNP 0007.scaffold00024 28148 1 G A - ScafM SNP 0007.scaffold00024 28246 1 G C scaffold29147 ScafM INDEL 0007.scaffold00024 28310 8 ........ ACTCATAG scaffold29147 ReadM SNP 0007.scaffold00024 28317 1 G A - ScafM SNP 0007.scaffold00024 28318 1 G A scaffold29147 ScafM INDEL 0007.scaffold00024 28319 1 . G scaffold29147 ScafM INDEL 0007.scaffold00024 28322 1 . G scaffold29147 ScafM SNP 0007.scaffold00024 28383 1 C A scaffold29147 ScafM SNP 0007.scaffold00024 28410 1 C G scaffold29147 ScafM SNP 0007.scaffold00024 28463 1 C T scaffold29147 ScafM INDEL 0007.scaffold00024 28499 1 C . scaffold29147 ScafM SNP 0007.scaffold00024 28502 1 T A scaffold29147 Both INDEL 0007.scaffold00024 28884 1 . G scaffold29147 ScafM SNP 0007.scaffold00024 29308 1 G C scaffold29147 ScafM SNP 0007.scaffold00024 29420 1 T A scaffold29147 ScafM SNP 0007.scaffold00024 29635 1 T C scaffold29147 ScafM SNP 0007.scaffold00024 29768 1 T C scaffold29147 ScafM SNP 0007.scaffold00024 29945 1 C G scaffold29147 ReadM SNP 0007.scaffold00024 30131 1 T G - ScafM SNP 0007.scaffold00024 30407 1 T C scaffold29147 ScafM SNP 0007.scaffold00024 30413 1 C A scaffold29147 Both SNP 0007.scaffold00024 30470 1 T C scaffold29147 ScafM SNP 0007.scaffold00024 30603 1 C T scaffold29147 ScafM SNP 0007.scaffold00024 31332 1 C T scaffold29147 Both SNP 0007.scaffold00024 31568 1 A G scaffold29147 ReadM SNP 0007.scaffold00024 31790 1 A T - ScafM SNP 0007.scaffold00024 31826 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 31859 2 TA AC scaffold10679 ScafM SNP 0007.scaffold00024 31926 1 C T scaffold10679 Both SNP 0007.scaffold00024 31928 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 31940 1 C A scaffold10679 ScafM SNP 0007.scaffold00024 31942 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 31985 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 32031 1 G T scaffold10679 ScafM SNP 0007.scaffold00024 32091 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 32139 1 G A scaffold10679 ScafM SNP 0007.scaffold00024 32160 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 32215 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 32217 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 32228 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 32238 1 G A scaffold10679 ScafM INDEL 0007.scaffold00024 32271 1 C . scaffold10679 ScafM SNP 0007.scaffold00024 32336 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 32360 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 32425 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 32525 1 G A scaffold10679 ScafM SNP 0007.scaffold00024 32570 1 G A scaffold10679 ScafM SNP 0007.scaffold00024 32589 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 32597 1 A C scaffold10679 ScafM SNP 0007.scaffold00024 32628 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 32685 1 G C scaffold10679 ScafM SNP 0007.scaffold00024 32704 1 G C scaffold10679 ScafM SNP 0007.scaffold00024 32724 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 32790 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 32792 1 T G scaffold10679 ScafM SNP 0007.scaffold00024 32819 1 G T scaffold10679 Both SNP 0007.scaffold00024 32827 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 32857 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 32912 1 C T scaffold10679 Both SNP 0007.scaffold00024 32928 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 32933 1 A T scaffold10679 Both SNP 0007.scaffold00024 32963 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 33087 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 33105 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 33159 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 33198 1 C G scaffold10679 ScafM SNP 0007.scaffold00024 33200 2 TA AG scaffold10679 ScafM SNP 0007.scaffold00024 33248 1 G T scaffold10679 ReadM SNP 0007.scaffold00024 33511 1 G T - ScafM SNP 0007.scaffold00024 34320 1 C A scaffold10679 ScafM INDEL 0007.scaffold00024 34367 5 TGCTT ..... scaffold10679 ScafM SNP 0007.scaffold00024 34400 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 34409 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 34414 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 34427 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 34468 1 C G scaffold10679 Both SNP 0007.scaffold00024 34534 1 C T scaffold10679 ScafM INDEL 0007.scaffold00024 34554 1 A . scaffold10679 ScafM SNP 0007.scaffold00024 34602 1 C A scaffold10679 ScafM SNP 0007.scaffold00024 34606 1 T G scaffold10679 Both SNP 0007.scaffold00024 34642 1 A C scaffold10679 ScafM SNP 0007.scaffold00024 34705 1 T A scaffold10679 ScafM SNP 0007.scaffold00024 34824 1 C A scaffold10679 ScafM INDEL 0007.scaffold00024 34889 6 AAAAAA ...... scaffold10679 ScafM SNP 0007.scaffold00024 34896 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 34921 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 35123 1 A C scaffold10679 ScafM SNP 0007.scaffold00024 35136 1 C G scaffold10679 ScafM SNP 0007.scaffold00024 35154 1 T C scaffold10679 ScafM SNP 0007.scaffold00024 35248 1 G A scaffold10679 ScafM SNP 0007.scaffold00024 35274 1 G T scaffold10679 ScafM SNP 0007.scaffold00024 35280 1 C G scaffold10679 ScafM SNP 0007.scaffold00024 35296 1 T G scaffold10679 ScafM SNP 0007.scaffold00024 35327 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 35349 1 G C scaffold10679 ScafM SNP 0007.scaffold00024 35398 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 35424 1 C T scaffold10679 Both SNP 0007.scaffold00024 35520 1 T A scaffold10679 ScafM INDEL 0007.scaffold00024 35590 5 ..... GGTAA scaffold10679 ScafM SNP 0007.scaffold00024 35707 1 C T scaffold10679 Both SNP 0007.scaffold00024 35732 1 G A scaffold10679 ScafM INDEL 0007.scaffold00024 35741 2 .C TT scaffold10679 ScafM INDEL 0007.scaffold00024 35770 1 A . scaffold10679 ScafM SNP 0007.scaffold00024 35776 1 A C scaffold10679 ScafM SNP 0007.scaffold00024 35780 1 T G scaffold10679 ScafM SNP 0007.scaffold00024 35795 1 C A scaffold10679 ScafM SNP 0007.scaffold00024 35921 1 G A scaffold10679 ScafM SNP 0007.scaffold00024 36038 1 A G scaffold10679 ScafM INDEL 0007.scaffold00024 36046 1 . A scaffold10679 ScafM SNP 0007.scaffold00024 36050 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 36059 1 C A scaffold10679 ScafM SNP 0007.scaffold00024 36079 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 36149 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 36224 1 A T scaffold10679 Both SNP 0007.scaffold00024 36339 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 36403 1 A G scaffold10679 ScafM SNP 0007.scaffold00024 36405 1 A T scaffold10679 ScafM SNP 0007.scaffold00024 36428 2 TT CC scaffold10679 ScafM SNP 0007.scaffold00024 36450 1 C T scaffold10679 ScafM SNP 0007.scaffold00024 36489 1 G T scaffold10679 ScafM SNP 0007.scaffold00024 36491 3 GGA CTG scaffold10679 ScafM INDEL 0007.scaffold00024 36496 2 AC .. scaffold10679 ScafM INDEL 0007.scaffold00024 36499 1 A . scaffold10679 ScafM INDEL 0007.scaffold00024 36501 2 CC .G scaffold10679 ScafM INDEL 0007.scaffold00024 36506 3 CCC .AA scaffold10679 ScafM SNP 0007.scaffold00024 36510 1 C G scaffold10679 ScafM INDEL 0007.scaffold00024 36513 3 CTG ... scaffold10679 ScafM INDEL 0007.scaffold00024 36517 5 TATTT ..CCC scaffold10679 ReadM SNP 0007.scaffold00024 36528 1 C T - ReadM SNP 0007.scaffold00024 36588 1 C T - ReadM SNP 0007.scaffold00024 36653 1 A G - ReadM SNP 0007.scaffold00024 36961 1 T A - ReadM SNP 0007.scaffold00024 37251 1 A G - ReadM SNP 0007.scaffold00024 37334 1 C T - ScafM SNP 0007.scaffold00024 37724 1 C A scaffold10679 Both SNP 0007.scaffold00024 37782 1 T C scaffold10679 Both SNP 0007.scaffold00024 37807 1 T C scaffold10679 ReadM INDEL 0007.scaffold00024 37839 1 T . - ReadM SNP 0007.scaffold00024 38631 1 A G - ReadM SNP 0007.scaffold00024 38882 1 G T - ReadM SNP 0007.scaffold00024 39734 1 A C - ReadM SNP 0007.scaffold00024 40173 1 T A - ReadM SNP 0007.scaffold00024 40238 1 T C - ReadM SNP 0007.scaffold00024 40835 1 A C - ReadM SNP 0007.scaffold00024 43764 1 A C - ReadM SNP 0007.scaffold00024 44109 1 A G - ReadM SNP 0007.scaffold00024 44261 1 A G - ReadM SNP 0007.scaffold00024 44691 1 A G - ScafM SNP 0007.scaffold00024 45476 1 A G scaffold5970 ScafM SNP 0007.scaffold00024 45485 2 GG CA scaffold5970 ScafM SNP 0007.scaffold00024 45488 1 T C scaffold5970 ScafM SNP 0007.scaffold00024 45538 1 T G scaffold5970 ScafM SNP 0007.scaffold00024 45552 1 C T scaffold5970 ScafM SNP 0007.scaffold00024 45586 1 A C scaffold5970 ScafM SNP 0007.scaffold00024 45610 1 C A scaffold5970 ScafM SNP 0007.scaffold00024 45618 1 T C scaffold5970 ReadM SNP 0007.scaffold00024 47981 1 T C - ReadM INDEL 0007.scaffold00024 48076 1 A . - ReadM SNP 0007.scaffold00024 48288 1 C T - ReadM SNP 0007.scaffold00024 48590 1 A T - ReadM SNP 0007.scaffold00024 48596 1 A G - ScafM SNP 0007.scaffold00024 50465 1 A T scaffold49111 ScafM INDEL 0007.scaffold00024 50536 50 AGTCTCTAATATGTACATTTATAAATTATATCTTGTAAATTATAATAAAA .................................................. scaffold49111 ScafM SNP 0007.scaffold00024 50616 1 G T scaffold49111 ReadM SNP 0007.scaffold00024 50993 1 G T - ReadM SNP 0007.scaffold00024 51015 1 T A - ReadM SNP 0007.scaffold00024 51620 1 A G - ReadM SNP 0007.scaffold00024 51731 1 T G - ReadM SNP 0007.scaffold00024 51756 1 T G - ReadM SNP 0007.scaffold00024 52010 1 A G - ReadM INDEL 0007.scaffold00024 52773 1 T . - ReadM SNP 0007.scaffold00024 53242 1 G A - ScafM SNP 0007.scaffold00024 53477 1 G A scaffold3896 ScafM SNP 0007.scaffold00024 53480 1 G A scaffold3896 ScafM SNP 0007.scaffold00024 53492 1 A C scaffold3896 ScafM SNP 0007.scaffold00024 53495 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53503 2 CA AG scaffold3896 ScafM SNP 0007.scaffold00024 53515 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53523 1 A C scaffold3896 ScafM SNP 0007.scaffold00024 53531 1 C A scaffold3896 ScafM SNP 0007.scaffold00024 53537 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53541 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53559 1 A C scaffold3896 ScafM SNP 0007.scaffold00024 53562 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53570 2 AT CC scaffold3896 ScafM SNP 0007.scaffold00024 53573 2 GC AT scaffold3896 ScafM SNP 0007.scaffold00024 53576 1 T C scaffold3896 ScafM INDEL 0007.scaffold00024 53595 3 ... TGT scaffold3896 ScafM SNP 0007.scaffold00024 53598 1 A C scaffold3896 ScafM SNP 0007.scaffold00024 53698 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53702 1 T C scaffold3896 ReadM SNP 0007.scaffold00024 53708 1 T C - ScafM SNP 0007.scaffold00024 53708 2 TC CA scaffold3896 ScafM SNP 0007.scaffold00024 53713 2 AG TA scaffold3896 ScafM SNP 0007.scaffold00024 53716 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53720 1 A G scaffold3896 Both SNP 0007.scaffold00024 53727 1 G C scaffold3896 ScafM SNP 0007.scaffold00024 53729 1 T C scaffold3896 ScafM SNP 0007.scaffold00024 53736 1 A T scaffold3896 ScafM SNP 0007.scaffold00024 53740 1 A G scaffold3896 ScafM SNP 0007.scaffold00024 53761 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53771 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53779 1 T C scaffold3896 ScafM SNP 0007.scaffold00024 53788 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53791 1 A C scaffold3896 ScafM SNP 0007.scaffold00024 53811 1 G A scaffold3896 ScafM SNP 0007.scaffold00024 53824 1 C T scaffold3896 ScafM SNP 0007.scaffold00024 53827 1 T C scaffold3896 ScafM INDEL 0007.scaffold00024 53839 3 ... TGA scaffold3896 ScafM SNP 0007.scaffold00024 53866 1 A C scaffold3896 ReadM SNP 0007.scaffold00024 54849 1 T C - ReadM SNP 0007.scaffold00024 55308 1 G A - ScafM SNP 0007.scaffold00024 55476 1 T A scaffold10987 ScafM SNP 0007.scaffold00024 55532 1 T C scaffold10987 ScafM SNP 0007.scaffold00024 55577 1 C A scaffold10987 ReadM SNP 0007.scaffold00024 55733 1 C A - ScafM SNP 0007.scaffold00024 56046 1 T C scaffold10987 ScafM SNP 0007.scaffold00024 56098 1 T A scaffold10987 ScafM INDEL 0007.scaffold00024 56101 1 . T scaffold10987 ScafM SNP 0007.scaffold00024 56131 1 A C scaffold10987 ScafM SNP 0007.scaffold00024 56133 1 G T scaffold10987 ScafM INDEL 0007.scaffold00024 56139 1 C . scaffold10987 ScafM INDEL 0007.scaffold00024 56144 1 C . scaffold10987 ScafM SNP 0007.scaffold00024 56150 1 A C scaffold10987 ScafM SNP 0007.scaffold00024 56154 1 T A scaffold10987 ScafM SNP 0007.scaffold00024 56166 1 C T scaffold10987 ReadM SNP 0007.scaffold00024 56746 1 G C - ReadM INDEL 0007.scaffold00024 57244 2 .. CG - ScafM SNP 0007.scaffold00024 57981 1 G T scaffold14018 ScafM SNP 0007.scaffold00024 57991 1 G A scaffold14018 ScafM SNP 0007.scaffold00024 58001 1 G A scaffold14018 ScafM SNP 0007.scaffold00024 58048 1 C T scaffold14018 ReadM SNP 0007.scaffold00024 60143 1 C T - ReadM SNP 0007.scaffold00024 60151 1 T C - ReadM SNP 0007.scaffold00024 60176 1 G C - ReadM SNP 0007.scaffold00024 60212 1 T C - ReadM SNP 0007.scaffold00024 60461 1 A G - ReadM SNP 0007.scaffold00024 61054 1 A G - ReadM SNP 0007.scaffold00024 61080 1 G A - ReadM SNP 0007.scaffold00024 61138 1 A C - ReadM SNP 0007.scaffold00024 61304 1 G A - ReadM SNP 0007.scaffold00024 62156 1 A T - ReadM SNP 0007.scaffold00024 62384 1 A G - ReadM SNP 0007.scaffold00024 62679 1 A T - ReadM SNP 0007.scaffold00024 62861 1 A C - ReadM SNP 0007.scaffold00024 63832 1 T C - ReadM SNP 0007.scaffold00024 63923 1 G A - ReadM SNP 0007.scaffold00024 64123 1 T C - ReadM SNP 0007.scaffold00024 64751 1 A C - ReadM SNP 0007.scaffold00024 65137 1 C T - ReadM SNP 0007.scaffold00024 66305 1 T A - ReadM SNP 0007.scaffold00024 66504 1 A G - ReadM SNP 0007.scaffold00024 66588 1 A G - ReadM SNP 0007.scaffold00024 66613 1 T G - ReadM SNP 0007.scaffold00024 68395 1 T C - ReadM SNP 0007.scaffold00024 68533 1 T G - ScafM SNP 0007.scaffold00024 68991 1 A G scaffold10100 ScafM SNP 0007.scaffold00024 69010 1 A G scaffold10100 ScafM SNP 0007.scaffold00024 69024 1 C A scaffold10100 ScafM SNP 0007.scaffold00024 69040 1 G T scaffold10100 ScafM INDEL 0007.scaffold00024 69052 1 . C scaffold10100 ScafM INDEL 0007.scaffold00024 69079 2 .. CA scaffold10100 ScafM SNP 0007.scaffold00024 69097 1 C T scaffold10100 ScafM SNP 0007.scaffold00024 69119 1 C T scaffold10100 ScafM INDEL 0007.scaffold00024 69126 1 . A scaffold10100 ScafM SNP 0007.scaffold00024 69142 1 T A scaffold10100 Both SNP 0007.scaffold00024 69145 1 T C scaffold10100 ScafM SNP 0007.scaffold00024 69162 1 C T scaffold10100 ReadM INDEL 0007.scaffold00024 69175 2 .. 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CAGGCT scaffold28305 ScafM SNP 0007.scaffold00024 86108 1 T G scaffold28305 ScafM SNP 0007.scaffold00024 86115 1 G A scaffold28305 ScafM SNP 0007.scaffold00024 86124 1 T C scaffold28305 ScafM SNP 0007.scaffold00024 86132 3 TTT GCA scaffold28305 ScafM SNP 0007.scaffold00024 86151 1 C T scaffold28305 ScafM SNP 0007.scaffold00024 86155 1 G A scaffold28305 ScafM SNP 0007.scaffold00024 86184 1 T C scaffold28305 ScafM SNP 0007.scaffold00024 86239 1 A G scaffold28305 ScafM SNP 0007.scaffold00024 86245 1 G A scaffold28305 ScafM SNP 0007.scaffold00024 86260 1 T C scaffold28305 Both SNP 0007.scaffold00024 86316 1 G A scaffold28305 ScafM SNP 0007.scaffold00024 87001 1 T A scaffold28305 ScafM SNP 0007.scaffold00024 87026 1 T G scaffold28305 ScafM SNP 0007.scaffold00024 88482 1 T C scaffold19506 ScafM SNP 0007.scaffold00024 88504 1 A G scaffold19506 ScafM SNP 0007.scaffold00024 88526 1 C T scaffold19506 ScafM SNP 0007.scaffold00024 88528 1 A G scaffold19506 ScafM SNP 0007.scaffold00024 88530 1 T C scaffold19506 ScafM SNP 0007.scaffold00024 88591 1 A G scaffold19506 ScafM INDEL 0007.scaffold00024 88615 1 A . scaffold19506 ScafM SNP 0007.scaffold00024 88617 1 C T scaffold19506 ScafM INDEL 0007.scaffold00024 88647 4 .... TTTA scaffold19506 ScafM SNP 0007.scaffold00024 88654 1 G A scaffold19506 ScafM SNP 0007.scaffold00024 88685 1 C T scaffold19506 ScafM SNP 0007.scaffold00024 88773 1 G C scaffold19506 ScafM SNP 0007.scaffold00024 88785 1 A G scaffold19506 ScafM SNP 0007.scaffold00024 88808 1 C A scaffold19506 ScafM SNP 0007.scaffold00024 88816 1 A G scaffold19506 Both SNP 0007.scaffold00024 89313 1 T C scaffold19506 ScafM SNP 0007.scaffold00024 89729 1 C T scaffold19506 Both SNP 0007.scaffold00024 89832 1 A C scaffold19506 ReadM INDEL 0007.scaffold00024 89918 1 T . - ScafM SNP 0007.scaffold00024 90169 1 A T scaffold19506 Both SNP 0007.scaffold00024 90279 1 C A scaffold19506 ReadM SNP 0007.scaffold00024 90577 1 A C - Both SNP 0007.scaffold00024 90726 1 T A scaffold19506 ReadM INDEL 0007.scaffold00024 90947 1 . 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CCAGATTTCGTCCGAGCTGA scaffold27117 ScafM SNP 0007.scaffold00024 117061 1 A C scaffold27117 ReadM SNP 0007.scaffold00024 119375 1 G A - ReadM SNP 0007.scaffold00024 119396 1 C T - ReadM SNP 0007.scaffold00024 119452 1 T C - ReadM SNP 0007.scaffold00024 119616 1 T C - ReadM SNP 0007.scaffold00024 119657 1 G A - ReadM SNP 0007.scaffold00024 119701 1 C A - ReadM SNP 0007.scaffold00024 119709 1 C T - ReadM SNP 0007.scaffold00024 119807 1 G A - ScafM SNP 0007.scaffold00024 119906 1 A G scaffold19506 ScafM SNP 0007.scaffold00024 119923 1 A G scaffold19506 Both SNP 0007.scaffold00024 119928 1 C A scaffold19506 Both SNP 0007.scaffold00024 120017 1 T C scaffold19506 ScafM SNP 0007.scaffold00024 120055 1 G A scaffold19506 ScafM SNP 0007.scaffold00024 120058 1 T C scaffold19506 Both INDEL 0007.scaffold00024 120078 1 G . scaffold19506 ScafM SNP 0007.scaffold00024 120099 1 C T scaffold19506 ReadM SNP 0007.scaffold00024 120244 1 T C - ReadM SNP 0007.scaffold00024 120812 1 T C - ReadM SNP 0007.scaffold00024 120931 1 A C - ScafM SNP 0007.scaffold00024 121171 1 A G scaffold27117 ScafM INDEL 0007.scaffold00024 121199 1 . T scaffold27117 ScafM INDEL 0007.scaffold00024 121203 1 T . scaffold27117 ScafM SNP 0007.scaffold00024 121255 1 G A scaffold27117 ScafM SNP 0007.scaffold00024 121338 1 C G scaffold27117 ScafM SNP 0007.scaffold00024 121341 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 121915 1 A T scaffold19506 ScafM SNP 0007.scaffold00024 121919 1 G A scaffold19506 ScafM SNP 0007.scaffold00024 122690 1 C T scaffold27117 ScafM SNP 0007.scaffold00024 122757 1 C T scaffold27117 ScafM SNP 0007.scaffold00024 122836 1 G T scaffold27117 ReadM SNP 0007.scaffold00024 123041 1 G A - ReadM SNP 0007.scaffold00024 123075 1 T G - ReadM SNP 0007.scaffold00024 123104 1 T C - ReadM SNP 0007.scaffold00024 123156 1 A G - ReadM SNP 0007.scaffold00024 123219 1 G A - ReadM SNP 0007.scaffold00024 123235 1 A G - ReadM SNP 0007.scaffold00024 123413 1 G A - ReadM SNP 0007.scaffold00024 123431 1 G T - ReadM SNP 0007.scaffold00024 123570 1 G C - ReadM SNP 0007.scaffold00024 123706 1 T C - ReadM SNP 0007.scaffold00024 123719 1 G A - ReadM SNP 0007.scaffold00024 123723 1 T C - ReadM SNP 0007.scaffold00024 123853 1 A G - ReadM SNP 0007.scaffold00024 123863 1 G A - ReadM SNP 0007.scaffold00024 123872 1 T C - ReadM SNP 0007.scaffold00024 124039 1 T C - ReadM SNP 0007.scaffold00024 124057 1 A G - ReadM SNP 0007.scaffold00024 124104 1 A G - ReadM SNP 0007.scaffold00024 124107 1 T G - ReadM SNP 0007.scaffold00024 124193 1 A G - ReadM INDEL 0007.scaffold00024 124408 1 G . - ReadM SNP 0007.scaffold00024 124421 1 T C - ReadM SNP 0007.scaffold00024 124595 1 A G - ReadM SNP 0007.scaffold00024 124597 1 A G - ReadM SNP 0007.scaffold00024 124636 1 T A - ReadM SNP 0007.scaffold00024 124700 1 A G - ReadM SNP 0007.scaffold00024 124924 1 C A - ReadM SNP 0007.scaffold00024 125091 1 T C - ReadM SNP 0007.scaffold00024 125167 1 G A - ReadM SNP 0007.scaffold00024 125305 1 A G - ScafM SNP 0007.scaffold00024 125349 1 G T scaffold27117 ScafM SNP 0007.scaffold00024 125353 1 C G scaffold27117 Both SNP 0007.scaffold00024 125410 1 C T scaffold27117 Both SNP 0007.scaffold00024 125463 1 A G scaffold27117 ReadM SNP 0007.scaffold00024 125754 1 C A - ReadM SNP 0007.scaffold00024 125788 1 T C - ReadM SNP 0007.scaffold00024 125827 1 T C - ReadM SNP 0007.scaffold00024 125870 1 C T - ReadM SNP 0007.scaffold00024 126026 1 C T - ReadM SNP 0007.scaffold00024 126040 1 T C - Both SNP 0007.scaffold00024 126175 1 T C scaffold27117 Both SNP 0007.scaffold00024 126229 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 126254 1 T C scaffold27117 ScafM INDEL 0007.scaffold00024 126310 10 .......... CGAAGTCTTT scaffold27117 ScafM SNP 0007.scaffold00024 126321 1 T C scaffold27117 Both SNP 0007.scaffold00024 126375 1 T C scaffold27117 ReadM SNP 0007.scaffold00024 126553 1 G A - ScafM SNP 0007.scaffold00024 126734 1 T C scaffold27117 ScafM INDEL 0007.scaffold00024 126750 1 T . scaffold27117 ScafM SNP 0007.scaffold00024 126785 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 126806 1 A G scaffold27117 ScafM SNP 0007.scaffold00024 126809 1 G T scaffold27117 ScafM SNP 0007.scaffold00024 126873 1 G C scaffold27117 ScafM SNP 0007.scaffold00024 126880 1 A G scaffold27117 Both SNP 0007.scaffold00024 126897 1 G C scaffold27117 ScafM SNP 0007.scaffold00024 126947 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 126974 1 C A scaffold27117 ScafM SNP 0007.scaffold00024 126991 1 A G scaffold27117 ScafM SNP 0007.scaffold00024 127003 1 C G scaffold27117 Both SNP 0007.scaffold00024 127055 1 T G scaffold27117 ScafM SNP 0007.scaffold00024 127063 1 G A scaffold27117 ScafM SNP 0007.scaffold00024 127092 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 127133 1 A T scaffold27117 ScafM SNP 0007.scaffold00024 127153 1 T A scaffold27117 ScafM SNP 0007.scaffold00024 127189 1 C A scaffold27117 Both SNP 0007.scaffold00024 127245 1 A C scaffold27117 Both SNP 0007.scaffold00024 127337 1 A T scaffold27117 ScafM SNP 0007.scaffold00024 127385 1 G A scaffold27117 Both SNP 0007.scaffold00024 127388 1 A T scaffold27117 ScafM SNP 0007.scaffold00024 127454 1 A G scaffold27117 Both SNP 0007.scaffold00024 127472 1 T C scaffold27117 ScafM SNP 0007.scaffold00024 127537 1 C T scaffold27117 ScafM SNP 0007.scaffold00024 127564 1 G C scaffold27117 ScafM INDEL 0007.scaffold00024 127567 1 T . scaffold27117 ScafM SNP 0007.scaffold00024 127610 1 A T scaffold27117 ScafM SNP 0007.scaffold00024 127772 1 C A scaffold27117 ScafM SNP 0007.scaffold00024 127784 2 CA AG scaffold27117 ScafM SNP 0007.scaffold00024 127797 1 T G scaffold27117 ScafM SNP 0007.scaffold00024 127834 1 G C scaffold27117 ScafM SNP 0007.scaffold00024 127920 1 A G scaffold27117 ScafM SNP 0007.scaffold00024 127927 1 G T scaffold27117 ScafM SNP 0007.scaffold00024 128655 1 A C scaffold3959 ScafM INDEL 0007.scaffold00024 128671 4 TTTT ...G scaffold3959 ScafM SNP 0007.scaffold00024 128679 1 T C scaffold3959 ScafM SNP 0007.scaffold00024 128745 1 G C scaffold3959 ScafM SNP 0007.scaffold00024 128754 1 T C scaffold3959 ScafM SNP 0007.scaffold00024 128797 1 T C scaffold3959 ScafM SNP 0007.scaffold00024 128825 1 C T scaffold3959 ScafM SNP 0007.scaffold00024 128918 1 T C scaffold3959 ScafM SNP 0007.scaffold00024 128971 1 A G scaffold3959 ScafM SNP 0007.scaffold00024 128984 1 G C scaffold3959 ScafM SNP 0007.scaffold00024 128991 1 T G scaffold3959 ScafM SNP 0007.scaffold00024 128998 1 G T scaffold3959 ScafM SNP 0007.scaffold00024 129086 1 A G scaffold3959 ScafM SNP 0007.scaffold00024 129135 1 A G scaffold3959 ScafM INDEL 0007.scaffold00024 129175 1 A . scaffold3959 ScafM SNP 0007.scaffold00024 129232 2 AG GT scaffold3959 ScafM INDEL 0007.scaffold00024 129241 2 .T GC scaffold3959 ScafM SNP 0007.scaffold00024 129250 1 T G scaffold3959 ScafM SNP 0007.scaffold00024 129270 2 CT TC scaffold3959 ScafM INDEL 0007.scaffold00024 129292 2 AC .. scaffold3959 ScafM INDEL 0007.scaffold00024 129311 3 AAA ... scaffold3959 ScafM SNP 0007.scaffold00024 129335 1 T G scaffold3959 ScafM SNP 0007.scaffold00024 129360 1 C T scaffold3959 ScafM SNP 0007.scaffold00024 129373 1 G T scaffold3959 ReadM SNP 0007.scaffold00024 129388 1 A C - ScafM SNP 0007.scaffold00024 129407 1 G A scaffold3959 ScafM SNP 0007.scaffold00024 129418 1 C A scaffold3959 ScafM INDEL 0007.scaffold00024 129440 1 . G scaffold3959 ScafM SNP 0007.scaffold00024 129443 1 T C scaffold3959 ReadM SNP 0007.scaffold00024 129592 1 C T - ReadM SNP 0007.scaffold00024 129604 1 G A - ReadM SNP 0007.scaffold00024 129687 1 T C - ScafM SNP 0007.scaffold00024 129781 1 G A scaffold31805 ScafM SNP 0007.scaffold00024 129815 1 A G scaffold31805 ScafM SNP 0007.scaffold00024 129821 1 G C scaffold31805 ScafM SNP 0007.scaffold00024 129870 2 AC GT scaffold31805 Both SNP 0007.scaffold00024 129967 1 A G scaffold31805 Both SNP 0007.scaffold00024 129982 1 A T scaffold31805 ScafM SNP 0007.scaffold00024 130012 1 G A scaffold31805 ScafM INDEL 0007.scaffold00024 130039 2 .. TT scaffold31805 ScafM SNP 0007.scaffold00024 130051 1 C A scaffold31805 ScafM SNP 0007.scaffold00024 130364 1 A C scaffold31805 Both INDEL 0007.scaffold00024 130376 1 A . scaffold31805 Both SNP 0007.scaffold00024 130419 1 C G scaffold31805 ScafM SNP 0007.scaffold00024 130493 2 CT GA scaffold31805 ScafM SNP 0007.scaffold00024 130501 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 130519 1 G A scaffold31805 ScafM SNP 0007.scaffold00024 130536 1 T G scaffold31805 ScafM SNP 0007.scaffold00024 130540 1 T A scaffold31805 ScafM SNP 0007.scaffold00024 130553 1 T C scaffold31805 ScafM INDEL 0007.scaffold00024 130754 1 . T scaffold31805 ScafM INDEL 0007.scaffold00024 130978 2 .. AT scaffold31805 Both SNP 0007.scaffold00024 131078 1 G A scaffold31805 Both SNP 0007.scaffold00024 131108 1 A G scaffold31805 ScafM INDEL 0007.scaffold00024 131200 1 T . scaffold31805 ScafM SNP 0007.scaffold00024 131211 1 C T scaffold31805 ScafM SNP 0007.scaffold00024 131277 1 C T scaffold31805 ScafM SNP 0007.scaffold00024 131326 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 131614 1 C G scaffold31805 Both SNP 0007.scaffold00024 131648 1 A G scaffold31805 Both INDEL 0007.scaffold00024 131696 1 A . scaffold31805 ScafM SNP 0007.scaffold00024 131718 1 C G scaffold31805 ScafM SNP 0007.scaffold00024 131738 1 A C scaffold31805 ScafM SNP 0007.scaffold00024 131745 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 131761 1 G A scaffold31805 ScafM INDEL 0007.scaffold00024 131777 3 AAT ... scaffold31805 ScafM SNP 0007.scaffold00024 131806 1 G T scaffold31805 ScafM SNP 0007.scaffold00024 131826 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 131829 1 T C scaffold31805 Both SNP 0007.scaffold00024 131840 1 A C scaffold31805 Both SNP 0007.scaffold00024 131975 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 131984 1 A T scaffold31805 ScafM SNP 0007.scaffold00024 132017 1 A G scaffold31805 ScafM SNP 0007.scaffold00024 132097 1 C G scaffold31805 Both SNP 0007.scaffold00024 132185 1 A G scaffold31805 ScafM SNP 0007.scaffold00024 132300 1 G A scaffold31805 ScafM SNP 0007.scaffold00024 132307 1 T A scaffold31805 ScafM INDEL 0007.scaffold00024 132348 2 GG .. scaffold31805 ScafM SNP 0007.scaffold00024 132525 1 G A scaffold3402 ScafM SNP 0007.scaffold00024 132573 1 C T scaffold3402 ScafM SNP 0007.scaffold00024 132583 1 A C scaffold3402 ScafM SNP 0007.scaffold00024 132593 1 C T scaffold3402 ScafM SNP 0007.scaffold00024 132602 1 G A scaffold3402 ScafM SNP 0007.scaffold00024 132638 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 132674 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 132692 1 G T scaffold3402 ScafM SNP 0007.scaffold00024 132719 1 A G scaffold3402 ScafM SNP 0007.scaffold00024 132749 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 132751 1 G A scaffold3402 ScafM SNP 0007.scaffold00024 132778 1 A G scaffold3402 ScafM SNP 0007.scaffold00024 132783 1 T G scaffold3402 ScafM SNP 0007.scaffold00024 132836 1 T C scaffold3402 ScafM INDEL 0007.scaffold00024 132853 1 A . scaffold3402 ScafM INDEL 0007.scaffold00024 132855 1 . C scaffold3402 ScafM SNP 0007.scaffold00024 132859 1 G A scaffold3402 ScafM SNP 0007.scaffold00024 132868 1 A C scaffold3402 ReadM SNP 0007.scaffold00024 132929 1 G T - ReadM SNP 0007.scaffold00024 132966 1 T G - ScafM SNP 0007.scaffold00024 133029 1 T G scaffold3402 ScafM SNP 0007.scaffold00024 133037 1 C A scaffold3402 ScafM INDEL 0007.scaffold00024 133044 1 . C scaffold3402 ScafM SNP 0007.scaffold00024 133090 1 T C scaffold3402 ScafM INDEL 0007.scaffold00024 133106 3 TGT ... scaffold3402 ScafM SNP 0007.scaffold00024 133131 1 C T scaffold3402 ScafM SNP 0007.scaffold00024 133140 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 133174 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 133196 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 133241 1 A G scaffold3402 ScafM INDEL 0007.scaffold00024 133267 2 .. AT scaffold3402 ScafM INDEL 0007.scaffold00024 133277 1 . T scaffold3402 ScafM SNP 0007.scaffold00024 133322 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 133346 1 C A scaffold3402 ScafM INDEL 0007.scaffold00024 133348 6 TCCCCT ...... scaffold3402 ScafM SNP 0007.scaffold00024 133374 1 G T scaffold3402 ScafM SNP 0007.scaffold00024 133383 1 C T scaffold3402 ScafM SNP 0007.scaffold00024 133395 1 A G scaffold3402 ScafM SNP 0007.scaffold00024 133400 1 A G scaffold3402 ScafM SNP 0007.scaffold00024 133437 2 TT GC scaffold3402 ReadM SNP 0007.scaffold00024 133438 1 T C - ScafM SNP 0007.scaffold00024 133473 1 T C scaffold3402 ScafM SNP 0007.scaffold00024 133475 1 G A scaffold3402 ScafM SNP 0007.scaffold00024 133486 1 A T scaffold3402 ScafM SNP 0007.scaffold00024 133497 1 C T scaffold3402 ReadM SNP 0007.scaffold00024 133557 1 C T - ReadM SNP 0007.scaffold00024 133712 1 T C - ReadM SNP 0007.scaffold00024 133808 1 G A - ReadM SNP 0007.scaffold00024 134020 1 T C - ReadM SNP 0007.scaffold00024 134149 1 T A - ReadM SNP 0007.scaffold00024 134373 1 G A - ScafM SNP 0007.scaffold00024 134452 1 G A scaffold3402 ReadM INDEL 0007.scaffold00024 134652 1 . A - ReadM SNP 0007.scaffold00024 134684 1 A G - ReadM SNP 0007.scaffold00024 134770 1 T C - ReadM SNP 0007.scaffold00024 134801 1 A G - ReadM SNP 0007.scaffold00024 134809 1 A G - ScafM SNP 0007.scaffold00024 134868 1 A G scaffold3402 ReadM SNP 0007.scaffold00024 134982 1 T C - ReadM SNP 0007.scaffold00024 135050 1 T C - ReadM SNP 0007.scaffold00024 135171 1 G A - ScafM SNP 0007.scaffold00024 135399 1 C T scaffold3402 ScafM SNP 0007.scaffold00024 135688 1 A T scaffold3402 ScafM SNP 0007.scaffold00024 135737 1 G C scaffold3402 ScafM SNP 0007.scaffold00024 136377 1 G T scaffold31805 ScafM SNP 0007.scaffold00024 136419 1 C A scaffold31805 ScafM SNP 0007.scaffold00024 136429 1 A G scaffold31805 ScafM SNP 0007.scaffold00024 136432 1 T G scaffold31805 ScafM SNP 0007.scaffold00024 136510 1 A G scaffold31805 ScafM SNP 0007.scaffold00024 136543 1 G A scaffold31805 ScafM SNP 0007.scaffold00024 136567 1 T C scaffold31805 ScafM SNP 0007.scaffold00024 136597 1 A T scaffold31805 ScafM INDEL 0007.scaffold00024 136605 1 C . scaffold31805 ScafM SNP 0007.scaffold00024 136614 1 G A scaffold31805 ScafM SNP 0007.scaffold00024 136646 1 C T scaffold31805 ScafM SNP 0007.scaffold00024 136651 1 G A scaffold31805 ReadM SNP 0007.scaffold00024 136787 1 C G - ReadM SNP 0007.scaffold00024 136791 1 G T - ReadM SNP 0007.scaffold00024 136870 1 A G - Both SNP 0007.scaffold00024 137124 1 A G scaffold31805 ReadM SNP 0007.scaffold00024 137436 1 G C - ReadM SNP 0007.scaffold00024 137707 1 A T - ReadM SNP 0007.scaffold00024 137933 1 T G - ScafM SNP 0007.scaffold00024 138239 1 A C scaffold3402 ScafM SNP 0007.scaffold00024 138264 1 G T scaffold3402 ReadM SNP 0007.scaffold00024 138421 1 T C - ReadM SNP 0007.scaffold00024 138560 1 T A - ReadM SNP 0007.scaffold00024 138660 1 T C - ReadM SNP 0007.scaffold00024 138680 1 T C - ReadM INDEL 0007.scaffold00024 138716 1 . T - ReadM SNP 0007.scaffold00024 138955 1 C T - ReadM SNP 0007.scaffold00024 138961 1 C A - ReadM SNP 0007.scaffold00024 139008 1 A G - Both SNP 0007.scaffold00024 139150 1 C G scaffold51191 Both INDEL 0007.scaffold00024 139187 3 ... TAC scaffold51191 Both SNP 0007.scaffold00024 139267 1 G A scaffold51191 Both SNP 0007.scaffold00024 139482 1 C G scaffold51191 ReadM SNP 0007.scaffold00024 139599 1 G A - ReadM SNP 0007.scaffold00024 139621 1 T C - ReadM SNP 0007.scaffold00024 139625 1 A G - ReadM SNP 0007.scaffold00024 139708 1 G T - ReadM SNP 0007.scaffold00024 139718 1 G A - ScafM SNP 0007.scaffold00024 140998 1 G A scaffold36925 ScafM INDEL 0007.scaffold00024 141010 8 ACACAAGT ........ scaffold36925 ScafM SNP 0007.scaffold00024 141047 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141055 2 GC AG scaffold36925 ScafM SNP 0007.scaffold00024 141071 1 T C scaffold36925 ScafM INDEL 0007.scaffold00024 141096 1 . T scaffold36925 ScafM SNP 0007.scaffold00024 141101 1 C A scaffold36925 ScafM SNP 0007.scaffold00024 141115 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141118 1 A C scaffold36925 ScafM SNP 0007.scaffold00024 141122 1 C A scaffold36925 ScafM INDEL 0007.scaffold00024 141132 4 .... AAGT scaffold36925 ScafM INDEL 0007.scaffold00024 141141 6 ...... CTTCAG scaffold36925 ScafM SNP 0007.scaffold00024 141144 1 C T scaffold36925 ScafM INDEL 0007.scaffold00024 141149 3 ... AAA scaffold36925 ScafM SNP 0007.scaffold00024 141159 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141190 1 A G scaffold36925 ScafM SNP 0007.scaffold00024 141192 2 AC TG scaffold36925 ScafM SNP 0007.scaffold00024 141219 2 CG GA scaffold36925 ScafM SNP 0007.scaffold00024 141229 1 G A scaffold36925 ScafM INDEL 0007.scaffold00024 141251 1 . G scaffold36925 ScafM SNP 0007.scaffold00024 141259 1 C A scaffold36925 ScafM SNP 0007.scaffold00024 141263 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141368 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141392 1 C A scaffold36925 ScafM SNP 0007.scaffold00024 141403 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141433 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141443 1 G C scaffold36925 ScafM SNP 0007.scaffold00024 141455 1 A G scaffold36925 ScafM SNP 0007.scaffold00024 141470 1 C G scaffold36925 ScafM SNP 0007.scaffold00024 141486 1 G A scaffold36925 ScafM INDEL 0007.scaffold00024 141488 1 . T scaffold36925 ScafM SNP 0007.scaffold00024 141492 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141507 1 G T scaffold36925 ScafM INDEL 0007.scaffold00024 141510 4 GAGC .... scaffold36925 ScafM SNP 0007.scaffold00024 141546 1 G C scaffold36925 ScafM SNP 0007.scaffold00024 141557 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141580 1 T A scaffold36925 ScafM SNP 0007.scaffold00024 141618 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141696 1 C A scaffold36925 ScafM SNP 0007.scaffold00024 141727 1 A T scaffold36925 ScafM SNP 0007.scaffold00024 141739 1 C G scaffold36925 ScafM SNP 0007.scaffold00024 141829 1 T A scaffold36925 ScafM SNP 0007.scaffold00024 141874 1 A G scaffold36925 ScafM SNP 0007.scaffold00024 141879 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141882 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141939 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141944 1 C A scaffold36925 ScafM SNP 0007.scaffold00024 141949 2 GA CG scaffold36925 ScafM SNP 0007.scaffold00024 141961 1 T C scaffold36925 ScafM SNP 0007.scaffold00024 141966 1 C T scaffold36925 ScafM SNP 0007.scaffold00024 141971 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 141979 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 142013 1 G A scaffold36925 ScafM SNP 0007.scaffold00024 142030 1 T G scaffold36925 ScafM SNP 0007.scaffold00024 142039 1 G T scaffold36925 ScafM SNP 0007.scaffold00024 142151 1 G A scaffold36924 ScafM INDEL 0007.scaffold00024 142160 1 T . scaffold36924 ScafM SNP 0007.scaffold00024 142170 1 A G scaffold36924 ScafM SNP 0007.scaffold00024 142177 1 C T scaffold36924 ScafM SNP 0007.scaffold00024 142185 1 A G scaffold36924 ScafM SNP 0007.scaffold00024 142222 1 C A scaffold36924 ScafM SNP 0007.scaffold00024 142224 1 T A scaffold36924 ScafM SNP 0007.scaffold00024 142226 1 G C scaffold36924 ScafM SNP 0007.scaffold00024 142247 1 A G scaffold36924 ScafM SNP 0007.scaffold00024 142274 2 AC CT scaffold36924 ScafM INDEL 0007.scaffold00024 142325 1 . A scaffold36924 ScafM SNP 0007.scaffold00024 142334 1 G A scaffold36924 ScafM INDEL 0007.scaffold00024 142372 1 . A scaffold36924 ScafM SNP 0007.scaffold00024 142377 2 AA TT scaffold36924 ScafM SNP 0007.scaffold00024 142390 1 G C scaffold36924 ScafM INDEL 0007.scaffold00024 142393 7 GTTATCA ....... scaffold36924 ScafM SNP 0007.scaffold00024 142457 1 A C scaffold36924 ScafM SNP 0007.scaffold00024 142461 1 G A scaffold36924 ScafM SNP 0007.scaffold00024 142464 1 C G scaffold36924 ScafM INDEL 0007.scaffold00024 142483 6 ...... CTAATT scaffold36924 ScafM INDEL 0007.scaffold00024 142485 2 .. CT scaffold36924 ScafM INDEL 0007.scaffold00024 142494 2 .C AT scaffold36924 ScafM SNP 0007.scaffold00024 142511 1 C A scaffold36924 ScafM SNP 0007.scaffold00024 142514 1 C T scaffold36924 ScafM SNP 0007.scaffold00024 142535 1 A T scaffold36924 ScafM SNP 0007.scaffold00024 142580 1 G C scaffold36924 ScafM INDEL 0007.scaffold00024 142586 4 .... ATAT scaffold36924 Both SNP 0007.scaffold00024 142627 1 C T scaffold36924 Both SNP 0007.scaffold00024 142634 1 C T scaffold36924 ScafM INDEL 0007.scaffold00024 142695 1 A . scaffold36924 ScafM INDEL 0007.scaffold00024 142713 1 A . scaffold36924 ScafM INDEL 0007.scaffold00024 142733 1 G . scaffold36924 ScafM SNP 0007.scaffold00024 142769 1 T G scaffold36924 ScafM SNP 0007.scaffold00024 142784 1 C T scaffold36924 ScafM INDEL 0007.scaffold00024 142806 3 TAT ... scaffold36924 ScafM SNP 0007.scaffold00024 142857 2 AT GC scaffold36924 ScafM SNP 0007.scaffold00024 142872 1 T A scaffold36924 ReadM SNP 0007.scaffold00024 143061 1 G T - Both SNP 0007.scaffold00024 143338 1 A C scaffold36924 ReadM SNP 0007.scaffold00024 143361 1 G A - ReadM SNP 0007.scaffold00024 143391 1 A T - ReadM SNP 0007.scaffold00024 143450 1 G A - ReadM SNP 0007.scaffold00024 143488 1 A G - ReadM SNP 0007.scaffold00024 143502 1 T C - ReadM INDEL 0007.scaffold00024 143516 1 . T - Both SNP 0007.scaffold00024 143760 1 T A scaffold36924 ReadM INDEL 0007.scaffold00024 143807 1 . A - ReadM INDEL 0007.scaffold00024 143846 2 .. AA - Both SNP 0007.scaffold00024 143902 1 T C scaffold36924 Both SNP 0007.scaffold00024 143925 1 T A scaffold36924 Both SNP 0007.scaffold00024 143948 1 C G scaffold36924 Both SNP 0007.scaffold00024 144030 1 A T scaffold36924 Both SNP 0007.scaffold00024 144039 1 G C scaffold36924 Both SNP 0007.scaffold00024 144051 1 C A scaffold36924 ScafM SNP 0007.scaffold00024 144120 1 T A scaffold36924 ReadM SNP 0007.scaffold00024 144181 1 A G - ReadM SNP 0007.scaffold00024 144245 1 A G - Both SNP 0007.scaffold00024 144423 1 C G scaffold36924 Both SNP 0007.scaffold00024 144573 1 C T scaffold36924 ScafM SNP 0007.scaffold00024 144593 1 G A scaffold36924 Both SNP 0007.scaffold00024 144618 1 T A scaffold36924 ScafM SNP 0007.scaffold00024 144650 1 G A scaffold36924 Both SNP 0007.scaffold00024 144660 1 G A scaffold36924 ScafM SNP 0007.scaffold00024 144693 1 G T scaffold36924 Both SNP 0007.scaffold00024 144725 1 A G scaffold36924 ScafM SNP 0007.scaffold00024 144776 1 T A scaffold36924 ScafM SNP 0007.scaffold00024 144804 1 A C scaffold36924 ScafM SNP 0007.scaffold00024 144807 1 G T scaffold36924 Both SNP 0007.scaffold00024 144826 1 A C scaffold36924 Both SNP 0007.scaffold00024 144933 1 A C scaffold36924 ScafM SNP 0007.scaffold00024 144945 1 C T scaffold36924 Both SNP 0007.scaffold00024 144982 1 T C scaffold36924 Both SNP 0007.scaffold00024 144988 1 T C scaffold36924 Both SNP 0007.scaffold00024 145009 1 A T scaffold36924 ScafM SNP 0007.scaffold00024 145088 1 C T scaffold36924 ScafM SNP 0007.scaffold00024 145136 1 T A scaffold36924 Both SNP 0007.scaffold00024 145151 1 T C scaffold36924 ScafM SNP 0007.scaffold00024 145312 1 G A scaffold36924 ScafM SNP 0007.scaffold00024 145339 1 C A scaffold36924 ScafM INDEL 0007.scaffold00024 145351 1 . T scaffold36924 ScafM SNP 0007.scaffold00024 145359 1 T C scaffold36924 ScafM SNP 0007.scaffold00024 145365 1 A T scaffold36924 ScafM SNP 0007.scaffold00024 145376 1 C G scaffold36924 ScafM SNP 0007.scaffold00024 145395 1 G A scaffold36924 ScafM SNP 0007.scaffold00024 145411 1 G A scaffold36924 ScafM SNP 0007.scaffold00024 145844 1 C G scaffold68879 ScafM SNP 0007.scaffold00024 145857 1 T A scaffold68879 ScafM SNP 0007.scaffold00024 145865 1 A C scaffold68879 ScafM SNP 0007.scaffold00024 145885 1 G A scaffold68879 ScafM INDEL 0007.scaffold00024 146012 1 . T scaffold68879 ScafM SNP 0007.scaffold00024 146018 1 T G scaffold68879 ScafM SNP 0007.scaffold00024 146089 1 A T scaffold68879 ScafM INDEL 0007.scaffold00024 146170 1 T . scaffold68879 ScafM SNP 0007.scaffold00024 146174 2 AA TG scaffold68879 ScafM INDEL 0007.scaffold00024 146183 1 A . scaffold68879 ReadM SNP 0007.scaffold00024 146298 1 T C - ReadM SNP 0007.scaffold00024 146385 1 T C - ReadM SNP 0007.scaffold00024 146391 1 A C - ReadM SNP 0007.scaffold00024 146424 1 A T - ReadM INDEL 0007.scaffold00024 146510 2 .. AT - Both INDEL 0007.scaffold00024 146591 1 . T scaffold64700 Both SNP 0007.scaffold00024 146676 1 G A scaffold64700 Both SNP 0007.scaffold00024 146688 1 A T scaffold64700 ScafM SNP 0007.scaffold00024 146778 1 G A scaffold64700 ScafM SNP 0007.scaffold00024 146783 1 A G scaffold64700 ReadM SNP 0007.scaffold00024 146827 1 A G - ReadM SNP 0007.scaffold00024 146915 1 T C - ReadM INDEL 0007.scaffold00024 146942 1 T . - ReadM SNP 0007.scaffold00024 146974 1 A G - ReadM SNP 0007.scaffold00024 147094 1 T C - Both SNP 0007.scaffold00024 147220 1 T C scaffold68879 Both SNP 0007.scaffold00024 147228 1 A C scaffold68879 ScafM SNP 0007.scaffold00024 147367 1 C A scaffold68879 ScafM SNP 0007.scaffold00024 147373 1 C T scaffold68879 Both SNP 0007.scaffold00024 147416 1 T C scaffold68879 ScafM SNP 0007.scaffold00024 147458 2 CG AT scaffold68879 ScafM SNP 0007.scaffold00024 147475 1 G A scaffold68879 ScafM SNP 0007.scaffold00024 147479 1 T A scaffold68879 Both SNP 0007.scaffold00024 147549 1 A G scaffold68879 Both SNP 0007.scaffold00024 147609 1 G T scaffold68879 ScafM INDEL 0007.scaffold00024 147743 1 . T scaffold68879 Both INDEL 0007.scaffold00024 147796 1 . G scaffold68879 Both SNP 0007.scaffold00024 147801 1 C G scaffold68879 Both SNP 0007.scaffold00024 147843 1 C T scaffold68879 ScafM SNP 0007.scaffold00024 147904 1 T C scaffold68879 Both SNP 0007.scaffold00024 147985 1 A G scaffold68879 Both SNP 0007.scaffold00024 147994 1 T C scaffold68879 ScafM INDEL 0007.scaffold00024 148062 4 .... GGCT scaffold68879 ReadM SNP 0007.scaffold00024 148249 1 A T - ReadM SNP 0007.scaffold00024 148412 1 G A - ScafM SNP 0007.scaffold00024 148474 1 G A scaffold64237 Both SNP 0007.scaffold00024 148491 1 T C scaffold64237 ScafM SNP 0007.scaffold00024 148619 1 T A scaffold64237 ScafM INDEL 0007.scaffold00024 149074 1 T . scaffold29255 ScafM SNP 0007.scaffold00024 149076 1 T C scaffold29255 ScafM SNP 0007.scaffold00024 149089 1 G A scaffold29255 ScafM SNP 0007.scaffold00024 149100 1 G A scaffold29255 Both SNP 0007.scaffold00024 149546 1 A G scaffold29255 Both SNP 0007.scaffold00024 149575 1 A G scaffold29255 ScafM SNP 0007.scaffold00024 149609 1 G A scaffold29255 ScafM SNP 0007.scaffold00024 149636 1 T G scaffold29255 ScafM SNP 0007.scaffold00024 149647 1 A T scaffold29255 ReadM SNP 0007.scaffold00024 149680 1 T C - ReadM SNP 0007.scaffold00024 149960 1 C G - ReadM SNP 0007.scaffold00024 150099 1 T C - ReadM SNP 0007.scaffold00024 150215 1 G A - ReadM SNP 0007.scaffold00024 150218 1 A G - ReadM SNP 0007.scaffold00024 150225 1 A C - ReadM SNP 0007.scaffold00024 150306 1 A C - ScafM SNP 0007.scaffold00024 150415 1 A C scaffold27132 ScafM INDEL 0007.scaffold00024 150467 1 . A scaffold27132 Both SNP 0007.scaffold00024 150592 1 T C scaffold27132 ScafM SNP 0007.scaffold00024 150643 1 T G scaffold27132 Both SNP 0007.scaffold00024 150674 1 A G scaffold27132 Both SNP 0007.scaffold00024 150696 1 A G scaffold27132 ScafM SNP 0007.scaffold00024 150804 1 C A scaffold27132 ScafM SNP 0007.scaffold00024 150815 1 C T scaffold27132 ScafM SNP 0007.scaffold00024 150853 1 G A scaffold27132 ScafM SNP 0007.scaffold00024 150878 1 A G scaffold27132 ScafM SNP 0007.scaffold00024 150892 1 A G scaffold27132 ScafM SNP 0007.scaffold00024 151554 1 T C scaffold32489 ScafM SNP 0007.scaffold00024 151557 1 C T scaffold32489 ScafM SNP 0007.scaffold00024 152765 1 C T scaffold32489 ScafM INDEL 0007.scaffold00024 154026 1 . T scaffold32489 ScafM SNP 0007.scaffold00024 156279 1 G A scaffold49989 ReadM SNP 0007.scaffold00024 156625 1 T C - ReadM SNP 0007.scaffold00024 156832 1 A G - ReadM SNP 0007.scaffold00024 157107 2 AT GG - ReadM SNP 0007.scaffold00024 157127 1 T C - ReadM SNP 0007.scaffold00024 157286 1 T C - ReadM SNP 0007.scaffold00024 157297 1 T C - ReadM SNP 0007.scaffold00024 157340 1 G T - ReadM SNP 0007.scaffold00024 157506 1 G T - ReadM SNP 0007.scaffold00024 157999 1 A G - ReadM SNP 0007.scaffold00024 158006 1 T C - ReadM SNP 0007.scaffold00024 158011 1 T G - ReadM SNP 0007.scaffold00024 158070 1 G A - ReadM SNP 0007.scaffold00024 158120 1 C A - ReadM SNP 0007.scaffold00024 158125 1 C T - ReadM SNP 0007.scaffold00024 166561 1 A C - ReadM SNP 0007.scaffold00024 166570 1 A G - ReadM SNP 0007.scaffold00024 166611 1 G T - ReadM SNP 0007.scaffold00024 166682 1 A C - Both SNP 0007.scaffold00024 167781 1 G A scaffold8959 Both SNP 0007.scaffold00024 167822 1 T C scaffold8959 Both SNP 0007.scaffold00024 167842 1 G A scaffold8959 ScafM SNP 0007.scaffold00024 167869 1 A G scaffold8959 ScafM SNP 0007.scaffold00024 167897 1 A C scaffold8959 Both SNP 0007.scaffold00024 167942 1 T C scaffold8959 Both SNP 0007.scaffold00024 168086 1 C A scaffold8959 Both SNP 0007.scaffold00024 168105 1 A G scaffold8959 Both SNP 0007.scaffold00024 168191 1 A G scaffold8959 Both SNP 0007.scaffold00024 168304 1 T C scaffold8959 Both SNP 0007.scaffold00024 168328 1 A G scaffold8959 ScafM SNP 0007.scaffold00024 168355 1 A G scaffold8959 ReadM SNP 0007.scaffold00024 169544 1 T C - ReadM SNP 0007.scaffold00024 169729 1 T C - ReadM SNP 0007.scaffold00024 169793 1 A G - ReadM SNP 0007.scaffold00024 170190 1 T C - ReadM SNP 0007.scaffold00024 170255 1 T C - ReadM SNP 0007.scaffold00024 170288 1 A C - ReadM SNP 0007.scaffold00024 170352 1 T C - ReadM SNP 0007.scaffold00024 170361 1 A T - ReadM SNP 0007.scaffold00024 170596 1 A G - ReadM SNP 0007.scaffold00024 170601 1 C G - ScafM SNP 0007.scaffold00024 172948 1 G A scaffold43741 ScafM INDEL 0007.scaffold00024 173017 2 TT .. scaffold43741 ScafM SNP 0007.scaffold00024 173069 1 A C scaffold43741 ScafM SNP 0007.scaffold00024 173157 1 G A scaffold43741 ScafM SNP 0007.scaffold00024 173171 1 T G scaffold43741 ReadM SNP 0007.scaffold00024 173445 1 C T - ReadM SNP 0007.scaffold00024 173476 1 A C - ReadM SNP 0007.scaffold00024 173591 1 A G - ReadM SNP 0007.scaffold00024 173628 1 G T - ReadM SNP 0007.scaffold00024 173646 1 G C - ReadM SNP 0007.scaffold00024 173739 1 T C - ReadM SNP 0007.scaffold00024 173769 1 A G - ReadM SNP 0007.scaffold00024 173796 1 T C - ReadM SNP 0007.scaffold00024 173852 1 T G - ReadM SNP 0007.scaffold00024 173930 1 T C - ReadM SNP 0007.scaffold00024 174055 1 T C - ReadM SNP 0007.scaffold00024 174218 1 T C - ReadM SNP 0007.scaffold00024 174294 1 C A - ReadM SNP 0007.scaffold00024 174384 1 T A - ScafM INDEL 0007.scaffold00024 174433 8 ........ CGGATGCA scaffold4853 Both SNP 0007.scaffold00024 174524 1 C A scaffold4853 ScafM INDEL 0007.scaffold00024 174638 3 ... AGT scaffold4853 ScafM SNP 0007.scaffold00024 174660 1 G C scaffold4853 ScafM INDEL 0007.scaffold00024 174721 8 TAGTCTAT ........ scaffold4853 ReadM SNP 0007.scaffold00024 174881 1 T C - ReadM SNP 0007.scaffold00024 174893 1 C G - ReadM INDEL 0007.scaffold00024 175061 1 A . - ReadM INDEL 0007.scaffold00024 175250 1 A . - Both SNP 0007.scaffold00024 175299 1 A C scaffold4853 ScafM SNP 0007.scaffold00024 175375 1 T C scaffold4853 ScafM INDEL 0007.scaffold00024 175383 45 TAGATATAATTATTACGAAGTAACTATTACTTCTCAACTGAAAGC ............................................. scaffold4853 ScafM SNP 0007.scaffold00024 175440 1 A T scaffold4853 Both SNP 0007.scaffold00024 175583 1 C A scaffold4853 Both SNP 0007.scaffold00024 175595 1 G T scaffold4853 ScafM INDEL 0007.scaffold00024 175697 3 AAA ... scaffold4853 ScafM SNP 0007.scaffold00024 175703 1 C G scaffold4853 ScafM SNP 0007.scaffold00024 175737 1 C T scaffold4853 ScafM SNP 0007.scaffold00024 175749 1 T C scaffold4853 ScafM SNP 0007.scaffold00024 175785 1 T C scaffold4853 ScafM INDEL 0007.scaffold00024 175789 1 . C scaffold4853 Both SNP 0007.scaffold00024 175868 1 C G scaffold4853 ScafM INDEL 0007.scaffold00024 175941 1 T . scaffold4853 Both SNP 0007.scaffold00024 175949 1 T A scaffold4853 ReadM INDEL 0007.scaffold00024 175967 1 T . - ReadM SNP 0007.scaffold00024 176052 1 T G - ReadM SNP 0007.scaffold00024 176271 1 T C - ReadM SNP 0007.scaffold00024 176279 1 T A - ReadM SNP 0007.scaffold00024 176467 1 G T - ReadM SNP 0007.scaffold00024 176551 1 C A - ReadM SNP 0007.scaffold00024 176557 1 T A - ReadM SNP 0007.scaffold00024 176613 1 T A - ReadM SNP 0007.scaffold00024 176756 1 T C - ReadM SNP 0007.scaffold00024 176949 1 C G - ReadM SNP 0007.scaffold00024 177087 1 A C - ReadM SNP 0007.scaffold00024 177222 1 T G - ReadM SNP 0007.scaffold00024 177314 1 G A - ReadM SNP 0007.scaffold00024 177458 1 G A - ReadM SNP 0007.scaffold00024 177504 1 A G - ReadM INDEL 0007.scaffold00024 177652 1 . T - ReadM SNP 0007.scaffold00024 177728 1 T G - ReadM SNP 0007.scaffold00024 177910 1 T C - ReadM SNP 0007.scaffold00024 177928 1 A T - ReadM SNP 0007.scaffold00024 177989 1 G A - ReadM SNP 0007.scaffold00024 178124 1 A G - ReadM SNP 0007.scaffold00024 178203 1 C T - ReadM SNP 0007.scaffold00024 178377 1 C A - ReadM SNP 0007.scaffold00024 178498 1 A G - ReadM SNP 0007.scaffold00024 178500 1 C T - ReadM INDEL 0007.scaffold00024 178545 1 G . - ReadM SNP 0007.scaffold00024 178573 1 A G - ReadM SNP 0007.scaffold00024 178658 1 C G - ReadM SNP 0007.scaffold00024 178696 1 T C - ReadM SNP 0007.scaffold00024 178763 1 C G - ReadM SNP 0007.scaffold00024 178949 1 A T - ReadM SNP 0007.scaffold00024 179106 1 T C - ReadM SNP 0007.scaffold00024 179199 1 A T - ReadM SNP 0007.scaffold00024 179229 1 G A - ReadM SNP 0007.scaffold00024 179293 1 T C - ReadM SNP 0007.scaffold00024 179318 1 G A - ReadM SNP 0007.scaffold00024 179360 1 C A - ReadM SNP 0007.scaffold00024 179366 1 T C - ReadM SNP 0007.scaffold00024 179435 1 T C - ReadM SNP 0007.scaffold00024 179470 1 A G - ReadM SNP 0007.scaffold00024 179482 1 C G - ReadM SNP 0007.scaffold00024 179553 1 G T - ReadM SNP 0007.scaffold00024 179665 1 G A - ReadM SNP 0007.scaffold00024 179710 1 C G - ReadM SNP 0007.scaffold00024 179858 1 G A - ReadM SNP 0007.scaffold00024 181914 1 G C - Both SNP 0007.scaffold00024 182005 1 C T scaffold4471 ReadM SNP 0007.scaffold00024 182208 1 C T - ScafM SNP 0007.scaffold00024 182313 1 T G scaffold4471 ScafM INDEL 0007.scaffold00024 182337 1 . T scaffold4471 Both SNP 0007.scaffold00024 182483 1 G A scaffold4471 ScafM INDEL 0007.scaffold00024 182557 5 GACCA ..... scaffold4471 ScafM INDEL 0007.scaffold00024 182564 2 AA .. scaffold4471 ScafM INDEL 0007.scaffold00024 182567 1 A . scaffold4471 ScafM INDEL 0007.scaffold00024 182569 5 AAAAT ..... scaffold4471 Both SNP 0007.scaffold00024 182648 1 C A scaffold4471 ScafM INDEL 0007.scaffold00024 182756 27 CAAGGTAGGGAAATCTGGTAAAACCTT ........................... scaffold4471 Both SNP 0007.scaffold00024 182875 1 G A scaffold4471 Both SNP 0007.scaffold00024 182913 1 T G scaffold4471 ScafM SNP 0007.scaffold00024 182925 1 C T scaffold4471 ScafM SNP 0007.scaffold00024 182933 1 G A scaffold4471 Both SNP 0007.scaffold00024 182979 1 C T scaffold4471 Both SNP 0007.scaffold00024 183001 1 G A scaffold4471 Both SNP 0007.scaffold00024 183008 1 C G scaffold4471 Both SNP 0007.scaffold00024 183071 1 G T scaffold4471 Both SNP 0007.scaffold00024 183084 1 A C scaffold4471 Both SNP 0007.scaffold00024 183120 1 G T scaffold4471 Both SNP 0007.scaffold00024 183249 1 T C scaffold4471 Both SNP 0007.scaffold00024 183254 1 T G scaffold4471 ScafM SNP 0007.scaffold00024 183277 1 A C scaffold4471 ScafM SNP 0007.scaffold00024 183289 1 G C scaffold4471 ScafM SNP 0007.scaffold00024 183299 1 T A scaffold4471 ScafM SNP 0007.scaffold00024 183306 1 A C scaffold4471 ScafM SNP 0007.scaffold00024 183466 1 G A scaffold4471 ScafM SNP 0007.scaffold00024 183480 1 T G scaffold4471 Both SNP 0007.scaffold00024 183500 1 T C scaffold4471 Both SNP 0007.scaffold00024 183516 1 C A scaffold4471 ScafM SNP 0007.scaffold00024 183702 1 G C scaffold4471 ScafM SNP 0007.scaffold00024 183717 1 C A scaffold4471 ScafM SNP 0007.scaffold00024 183734 1 C G scaffold4471 Both SNP 0007.scaffold00024 183754 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 183857 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 183960 1 C A scaffold4471 ScafM SNP 0007.scaffold00024 184007 1 C G scaffold4471 ScafM SNP 0007.scaffold00024 184053 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 184059 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 184126 1 A C scaffold4471 ScafM SNP 0007.scaffold00024 184130 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 184181 1 A G scaffold4471 ScafM INDEL 0007.scaffold00024 184213 1 . A scaffold4471 ScafM SNP 0007.scaffold00024 184220 2 TT CC scaffold4471 ScafM SNP 0007.scaffold00024 184244 1 T A scaffold4471 ScafM SNP 0007.scaffold00024 184284 1 G A scaffold4471 ScafM INDEL 0007.scaffold00024 184322 29 ............................. AGCTTTCAAAAGTTGCAGTTTGCTCACCC scaffold4471 ScafM SNP 0007.scaffold00024 184409 1 C A scaffold4471 Both SNP 0007.scaffold00024 184543 1 A G scaffold4471 ScafM INDEL 0007.scaffold00024 184666 17 ................. ATGGCTGAACTCAAGCA scaffold4471 ScafM SNP 0007.scaffold00024 184710 1 G A scaffold4471 Both SNP 0007.scaffold00024 184748 1 C T scaffold4471 Both SNP 0007.scaffold00024 184756 1 G A scaffold4471 ScafM SNP 0007.scaffold00024 184824 1 C G scaffold4471 ScafM SNP 0007.scaffold00024 184858 1 T G scaffold4471 ScafM INDEL 0007.scaffold00024 184870 4 .... TTAA scaffold4471 ScafM SNP 0007.scaffold00024 184905 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 184912 1 C A scaffold4471 Both SNP 0007.scaffold00024 184945 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 184974 1 C T scaffold4471 Both SNP 0007.scaffold00024 185105 1 T G scaffold4471 Both SNP 0007.scaffold00024 185111 1 G C scaffold4471 ScafM SNP 0007.scaffold00024 185217 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 185219 1 T A scaffold4471 Both SNP 0007.scaffold00024 185225 1 A G scaffold4471 Both SNP 0007.scaffold00024 185373 1 A T scaffold4471 Both SNP 0007.scaffold00024 185380 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 185527 2 TA AT scaffold4471 ScafM SNP 0007.scaffold00024 185561 1 A G scaffold4471 ScafM INDEL 0007.scaffold00024 185564 2 .. TG scaffold4471 ScafM SNP 0007.scaffold00024 185571 1 C A scaffold4471 Both SNP 0007.scaffold00024 185650 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 185680 1 C T scaffold4471 ScafM SNP 0007.scaffold00024 185686 1 G A scaffold4471 ScafM INDEL 0007.scaffold00024 185716 1 . A scaffold4471 ScafM SNP 0007.scaffold00024 185719 1 C T scaffold4471 ScafM SNP 0007.scaffold00024 185836 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 185839 2 GT CC scaffold4471 ScafM SNP 0007.scaffold00024 185868 1 T A scaffold4471 ScafM SNP 0007.scaffold00024 185915 1 T G scaffold4471 Both SNP 0007.scaffold00024 185926 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 186026 1 T G scaffold4471 ScafM SNP 0007.scaffold00024 186030 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 186038 1 A C scaffold4471 ScafM SNP 0007.scaffold00024 186056 1 G T scaffold4471 ScafM SNP 0007.scaffold00024 186058 1 C A scaffold4471 ScafM SNP 0007.scaffold00024 186085 1 G A scaffold4471 ScafM SNP 0007.scaffold00024 186095 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 186121 1 G A scaffold4471 ScafM SNP 0007.scaffold00024 186167 1 G C scaffold4471 Both SNP 0007.scaffold00024 186197 1 T C scaffold4471 Both SNP 0007.scaffold00024 186237 1 C T scaffold4471 Both SNP 0007.scaffold00024 186333 1 C T scaffold4471 Both SNP 0007.scaffold00024 186368 1 C A scaffold4471 Both INDEL 0007.scaffold00024 186396 1 C . scaffold4471 Both SNP 0007.scaffold00024 186449 1 A G scaffold4471 Both SNP 0007.scaffold00024 186454 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 186510 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 186520 1 A G scaffold4471 ScafM SNP 0007.scaffold00024 186541 1 T C scaffold4471 ScafM SNP 0007.scaffold00024 186565 1 A G scaffold4471 ScafM INDEL 0007.scaffold00024 186590 1 . A scaffold4471 ScafM INDEL 0007.scaffold00024 186593 1 C . scaffold4471 Both SNP 0007.scaffold00024 186700 1 T G scaffold4471 Both SNP 0007.scaffold00024 186738 1 C T scaffold4471 Both SNP 0007.scaffold00024 186769 1 A T scaffold4471 Both SNP 0007.scaffold00024 186956 1 T C scaffold4471 Both SNP 0007.scaffold00024 186958 1 A G scaffold4471 Both SNP 0007.scaffold00024 187007 1 A T scaffold4471 Both SNP 0007.scaffold00024 187035 1 A G scaffold4471 Both SNP 0007.scaffold00024 187074 1 G C scaffold4471 Both SNP 0007.scaffold00024 187116 1 T A scaffold4471 Both SNP 0007.scaffold00024 187135 1 G T scaffold4471 ReadM SNP 0007.scaffold00024 187319 1 A T - ReadM SNP 0007.scaffold00024 187411 1 A G - ReadM SNP 0007.scaffold00024 187514 2 AA TG - ReadM SNP 0007.scaffold00024 187573 1 C G - ReadM INDEL 0007.scaffold00024 187717 1 G . - ReadM SNP 0007.scaffold00024 187741 1 T A - ReadM SNP 0007.scaffold00024 187762 1 T A - ReadM SNP 0007.scaffold00024 187924 1 T C - Both SNP 0007.scaffold00024 188119 1 C T scaffold4471 ReadM SNP 0007.scaffold00024 188243 1 C G - Both SNP 0007.scaffold00024 188314 1 G A scaffold4471 Both SNP 0007.scaffold00024 188353 1 G T scaffold4471 Both SNP 0007.scaffold00024 188409 1 G A scaffold4471 Both SNP 0007.scaffold00024 188487 1 C T scaffold4471 ReadM SNP 0007.scaffold00024 188550 1 A T - ReadM INDEL 0007.scaffold00024 188604 2 AA .. - ReadM SNP 0007.scaffold00024 188725 1 G A - ReadM SNP 0007.scaffold00024 188750 1 G C - ReadM SNP 0007.scaffold00024 188833 1 C T - ReadM SNP 0007.scaffold00024 188849 1 T G - ReadM SNP 0007.scaffold00024 188876 1 A G - ReadM SNP 0007.scaffold00024 188930 1 C G - ReadM SNP 0007.scaffold00024 188954 1 T C - ReadM SNP 0007.scaffold00024 188965 1 C A - Both SNP 0007.scaffold00024 189043 1 A G scaffold4471 Both SNP 0007.scaffold00024 189098 1 A C scaffold4471 Both SNP 0007.scaffold00024 189102 1 C T scaffold4471 ReadM SNP 0007.scaffold00024 189185 1 C G - ReadM SNP 0007.scaffold00024 189200 1 T G - ReadM SNP 0007.scaffold00024 189248 1 C G - ReadM SNP 0007.scaffold00024 189337 1 A C - ReadM SNP 0007.scaffold00024 189359 1 T G - ReadM SNP 0007.scaffold00024 189395 1 A C - ReadM SNP 0007.scaffold00024 189509 1 A G - ReadM SNP 0007.scaffold00024 189511 1 A C - Both SNP 0007.scaffold00024 189717 1 G A scaffold4471 Both SNP 0007.scaffold00024 189748 1 G A scaffold4471 Both SNP 0007.scaffold00024 189840 1 C T scaffold4471 ScafM SNP 0007.scaffold00024 189957 1 G T scaffold4471 ScafM SNP 0007.scaffold00024 189978 1 T C scaffold4471 ReadM SNP 0007.scaffold00024 190016 1 A C - ReadM SNP 0007.scaffold00024 190106 1 G A - ReadM SNP 0007.scaffold00024 190128 1 C T - ReadM SNP 0007.scaffold00024 190169 1 G A - ReadM SNP 0007.scaffold00024 190211 1 C T - ReadM INDEL 0007.scaffold00024 190493 1 . G - ReadM SNP 0007.scaffold00024 190541 1 C T - ReadM SNP 0007.scaffold00024 190606 1 G C - ReadM SNP 0007.scaffold00024 190611 1 A G - ReadM SNP 0007.scaffold00024 190785 1 G A - Both SNP 0007.scaffold00024 190804 1 G A scaffold4471 ScafM SNP 0007.scaffold00024 190864 1 C T scaffold4471 ScafM SNP 0007.scaffold00024 191148 2 CT TC scaffold4471 Both SNP 0007.scaffold00024 191315 1 G T scaffold4471 ReadM SNP 0007.scaffold00024 192257 1 T C - ScafM SNP 0007.scaffold00024 194765 1 G C scaffold25607 ScafM INDEL 0007.scaffold00024 194787 1 . T scaffold25607 ScafM SNP 0007.scaffold00024 194798 1 G A scaffold25607 ScafM SNP 0007.scaffold00024 194800 1 A G scaffold25607 ScafM SNP 0007.scaffold00024 194807 1 A C scaffold25607 ScafM INDEL 0007.scaffold00024 194826 7 CCTATTG ....... scaffold25607 ScafM SNP 0007.scaffold00024 194868 1 C T scaffold25607 ScafM SNP 0007.scaffold00024 194916 1 G A scaffold25607 ScafM SNP 0007.scaffold00024 194949 1 A G scaffold25607 ScafM SNP 0007.scaffold00024 195008 1 A T scaffold25607 ScafM SNP 0007.scaffold00024 195022 1 G A scaffold25607 ScafM SNP 0007.scaffold00024 195030 1 C G scaffold25607 ScafM SNP 0007.scaffold00024 195056 1 A C scaffold25607 ScafM SNP 0007.scaffold00024 195060 1 C T scaffold25607 ScafM SNP 0007.scaffold00024 195070 1 A G scaffold25607 ScafM SNP 0007.scaffold00024 195077 1 A T scaffold25607 ScafM INDEL 0007.scaffold00024 195137 5 ..... TTTGC scaffold25607 ScafM SNP 0007.scaffold00024 195168 1 C T scaffold25607 ScafM INDEL 0007.scaffold00024 195217 1 T . scaffold25607 ScafM SNP 0007.scaffold00024 195248 1 T C scaffold25607 ScafM SNP 0007.scaffold00024 195270 2 TT GC scaffold25607 ScafM SNP 0007.scaffold00024 195279 1 T G scaffold25607 ScafM SNP 0007.scaffold00024 195303 1 A T scaffold25607 ScafM INDEL 0007.scaffold00024 195320 6 GTTCTC ...... scaffold25607 ScafM SNP 0007.scaffold00024 195332 1 G A scaffold25607 ScafM SNP 0007.scaffold00024 195370 1 T C scaffold25607 ScafM SNP 0007.scaffold00024 195379 1 G T scaffold25607 ScafM SNP 0007.scaffold00024 195405 1 A T scaffold25607 ScafM SNP 0007.scaffold00024 196581 1 T C scaffold7899 ScafM SNP 0007.scaffold00024 196606 2 CA TG scaffold7899 ScafM SNP 0007.scaffold00024 196623 1 G T scaffold7899 ScafM SNP 0007.scaffold00024 196652 1 T C scaffold7899 ScafM SNP 0007.scaffold00024 196696 1 A C scaffold7899 ScafM SNP 0007.scaffold00024 196772 1 C A scaffold7899 ScafM SNP 0007.scaffold00024 196777 1 T C scaffold7899 ScafM SNP 0007.scaffold00024 196830 1 G A scaffold7899 ScafM SNP 0007.scaffold00024 196834 1 T C scaffold7899 ScafM INDEL 0007.scaffold00024 196856 2 .. TA scaffold7899 ScafM SNP 0007.scaffold00024 196859 1 A C scaffold7899 ScafM SNP 0007.scaffold00024 196865 1 G A scaffold7899 ScafM SNP 0007.scaffold00024 196867 1 T A scaffold7899 ScafM SNP 0007.scaffold00024 211955 1 G A scaffold4853 ScafM SNP 0007.scaffold00024 211999 1 C T scaffold4853 ScafM SNP 0007.scaffold00024 212029 1 C T scaffold4853 ScafM SNP 0007.scaffold00024 212046 1 T G scaffold4853 Both SNP 0007.scaffold00024 212098 1 G A scaffold4853 ScafM SNP 0007.scaffold00024 212171 1 G A scaffold4853 ScafM SNP 0007.scaffold00024 212183 2 GG AA scaffold4853 ScafM INDEL 0007.scaffold00024 212201 12 ............ TAGGGGTTGTTT scaffold4853 ScafM INDEL 0007.scaffold00024 212203 5 ..... GGTGT scaffold4853 ScafM SNP 0007.scaffold00024 212264 1 A G scaffold4853 ScafM SNP 0007.scaffold00024 212275 1 G T scaffold4853 Both SNP 0007.scaffold00024 212346 1 A G scaffold4853 ReadM INDEL 0007.scaffold00024 212427 1 C . - ReadM SNP 0007.scaffold00024 212476 1 T A - ReadM SNP 0007.scaffold00024 212553 1 T C - ReadM SNP 0007.scaffold00024 212791 1 A C - ReadM SNP 0007.scaffold00024 212813 1 A T - ReadM SNP 0007.scaffold00024 218878 1 A C - ReadM SNP 0007.scaffold00024 218891 1 G A - ReadM SNP 0007.scaffold00024 218977 1 T G - ReadM SNP 0007.scaffold00024 219615 1 G C - ReadM SNP 0007.scaffold00024 220132 1 G C - ReadM SNP 0007.scaffold00024 221328 1 C T - ReadM SNP 0007.scaffold00024 221666 1 G A - ReadM SNP 0007.scaffold00024 222468 1 A G - ReadM SNP 0007.scaffold00024 222608 1 A C - ReadM SNP 0007.scaffold00024 222630 1 T C - ReadM SNP 0007.scaffold00024 222860 1 C G - ReadM SNP 0007.scaffold00024 222925 1 T G - ReadM SNP 0007.scaffold00024 222955 1 G T - ReadM SNP 0007.scaffold00024 223017 1 A T - ReadM SNP 0007.scaffold00024 223042 1 T C - ReadM SNP 0007.scaffold00024 223060 1 A G - ReadM SNP 0007.scaffold00024 223323 1 A C - ReadM SNP 0007.scaffold00024 223686 1 G C - ReadM SNP 0007.scaffold00024 223956 1 C T - ReadM SNP 0007.scaffold00024 224014 1 T C - ReadM SNP 0007.scaffold00024 224606 1 A G - ReadM SNP 0007.scaffold00024 224948 1 A T - ReadM SNP 0007.scaffold00024 225063 1 C T - ReadM SNP 0007.scaffold00024 225466 1 T G - ScafM INDEL 0007.scaffold00024 225915 1 . A scaffold49822 Both SNP 0007.scaffold00024 226054 1 A T scaffold49822 Both SNP 0007.scaffold00024 226061 1 T C scaffold49822 Both SNP 0007.scaffold00024 226111 1 G A scaffold49822 ScafM INDEL 0007.scaffold00024 226209 47 ............................................... CTTTTCGTTCTATTCACTCTCAAGAAAAATAACCCTAAAAAACAAAC scaffold49822 ScafM SNP 0007.scaffold00024 226264 1 C T scaffold49822 Both SNP 0007.scaffold00024 226303 1 A G scaffold49822 ScafM SNP 0007.scaffold00024 226401 1 A T scaffold49822 ScafM INDEL 0007.scaffold00024 226458 2 .. TT scaffold49822 ScafM SNP 0007.scaffold00024 226460 1 C G scaffold49822 ReadM SNP 0007.scaffold00024 226490 1 G C - ScafM SNP 0007.scaffold00024 226571 1 G A scaffold49822 ScafM INDEL 0007.scaffold00024 226642 48 ................................................ GTTTTGAAAACAAAAAAGATAGAGAGATAAGGGATCGCCAAGTATAAC scaffold49822 ScafM SNP 0007.scaffold00024 226726 1 C T scaffold49822 Both SNP 0007.scaffold00024 226817 1 A G scaffold49822 ReadM SNP 0007.scaffold00024 226842 1 C T - ReadM SNP 0007.scaffold00024 227078 1 C T - ReadM SNP 0007.scaffold00024 227258 1 G A - ReadM SNP 0007.scaffold00024 227963 1 T C - ReadM SNP 0007.scaffold00024 228055 1 G A - ScafM SNP 0007.scaffold00024 228834 1 A T scaffold70414 Both SNP 0007.scaffold00024 228885 1 C T scaffold70414 ScafM SNP 0007.scaffold00024 228992 1 C A scaffold70414 ReadM SNP 0007.scaffold00024 229460 1 T C - ReadM SNP 0007.scaffold00024 229532 1 A C - Both SNP 0007.scaffold00024 229722 1 A C scaffold70414 ScafM SNP 0007.scaffold00024 229867 2 CC TT scaffold70414 Both SNP 0007.scaffold00024 230111 1 A G scaffold70414 Both SNP 0007.scaffold00024 230165 1 C G scaffold70414 ScafM SNP 0007.scaffold00024 230283 1 C T scaffold70414 ScafM SNP 0007.scaffold00024 230352 1 C A scaffold70414 ReadM SNP 0007.scaffold00024 230668 1 A T - ReadM SNP 0007.scaffold00024 230822 1 C T - ReadM SNP 0007.scaffold00024 231267 1 C A - ReadM SNP 0007.scaffold00024 231723 1 T C - ReadM SNP 0007.scaffold00024 232105 1 A G - ReadM SNP 0007.scaffold00024 232110 1 C A - ReadM SNP 0007.scaffold00024 232338 1 T C - ReadM SNP 0007.scaffold00024 232503 1 C G - ReadM SNP 0007.scaffold00024 232883 1 A C - ReadM SNP 0007.scaffold00024 233375 1 G A - ReadM SNP 0007.scaffold00024 233811 1 T C - ReadM SNP 0007.scaffold00024 233850 1 G A - ReadM INDEL 0007.scaffold00024 234059 3 CAG ... - ReadM SNP 0007.scaffold00024 234127 1 G A - ReadM SNP 0007.scaffold00024 234154 1 G A - ReadM SNP 0007.scaffold00024 234183 1 T C - ReadM SNP 0007.scaffold00024 234245 1 C G - ScafM SNP 0007.scaffold00024 235157 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 235223 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 235254 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 235268 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 235273 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 235278 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 235289 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 235324 2 TT AA scaffold8336 ScafM SNP 0007.scaffold00024 235328 1 A T scaffold8336 ReadM SNP 0007.scaffold00024 235642 1 C T - Both SNP 0007.scaffold00024 235715 1 C A scaffold8336 Both SNP 0007.scaffold00024 235733 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 235745 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 235748 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 235753 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 235792 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 235795 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 235804 1 C T scaffold8336 ReadM SNP 0007.scaffold00024 235902 1 A C - ReadM INDEL 0007.scaffold00024 235948 1 C . - ReadM SNP 0007.scaffold00024 236168 1 A G - ReadM SNP 0007.scaffold00024 236196 1 G A - ScafM SNP 0007.scaffold00024 237010 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 237019 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 237058 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 237066 1 C T scaffold8336 ScafM INDEL 0007.scaffold00024 237083 4 .... GCAC scaffold8336 ScafM SNP 0007.scaffold00024 237128 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 237136 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 237142 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 237144 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 237168 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 237190 1 . T scaffold8336 ScafM SNP 0007.scaffold00024 237209 1 G T scaffold8336 ScafM INDEL 0007.scaffold00024 237228 1 T . scaffold8336 ScafM SNP 0007.scaffold00024 237299 1 C T scaffold8336 ScafM INDEL 0007.scaffold00024 237384 2 CC .T scaffold8336 ScafM INDEL 0007.scaffold00024 237398 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 241442 1 G A scaffold71 ScafM SNP 0007.scaffold00024 241476 1 G T scaffold71 ScafM INDEL 0007.scaffold00024 241511 2 .C GG scaffold71 ScafM SNP 0007.scaffold00024 241521 2 TG CA scaffold71 ScafM SNP 0007.scaffold00024 241525 1 A T scaffold71 ScafM INDEL 0007.scaffold00024 241528 5 ..... TTTTT scaffold71 ScafM SNP 0007.scaffold00024 241530 1 C T scaffold71 ScafM SNP 0007.scaffold00024 241532 2 CC TT scaffold71 ScafM INDEL 0007.scaffold00024 241557 5 TTCTC ..... scaffold71 ScafM SNP 0007.scaffold00024 242332 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 242334 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 242343 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 242380 1 A C scaffold8336 ScafM INDEL 0007.scaffold00024 242408 1 . A scaffold8336 ScafM SNP 0007.scaffold00024 242479 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 242779 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 242876 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 242921 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 242927 1 C A scaffold8336 ScafM INDEL 0007.scaffold00024 242933 1 T . scaffold8336 ScafM SNP 0007.scaffold00024 242948 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 248728 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 248769 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 248783 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 248789 1 A G scaffold8336 Both SNP 0007.scaffold00024 248891 1 C T scaffold8336 Both SNP 0007.scaffold00024 248902 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 248920 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 248972 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 249018 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 249024 1 C T scaffold8336 ScafM INDEL 0007.scaffold00024 249031 3 ... CCA scaffold8336 ScafM SNP 0007.scaffold00024 249038 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 249041 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 249044 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 249060 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 249073 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 249085 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 249092 1 G A scaffold8336 ScafM INDEL 0007.scaffold00024 249126 5 ..... ATATA scaffold8336 ScafM SNP 0007.scaffold00024 249154 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 249156 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 249158 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 249162 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 249175 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 249184 1 A T scaffold8336 ReadM SNP 0007.scaffold00024 249261 1 A G - ReadM SNP 0007.scaffold00024 249275 1 A G - ReadM SNP 0007.scaffold00024 249325 1 T G - ReadM SNP 0007.scaffold00024 249395 1 T C - ReadM SNP 0007.scaffold00024 249441 1 A T - ReadM SNP 0007.scaffold00024 249469 1 A G - ReadM SNP 0007.scaffold00024 249492 1 C A - ReadM SNP 0007.scaffold00024 249664 1 A G - ReadM SNP 0007.scaffold00024 249718 1 T G - ReadM INDEL 0007.scaffold00024 249720 1 . A - ScafM SNP 0007.scaffold00024 249840 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 249863 1 G A scaffold8336 ScafM INDEL 0007.scaffold00024 249883 1 . T scaffold8336 Both SNP 0007.scaffold00024 249897 1 G A scaffold8336 Both SNP 0007.scaffold00024 249911 1 C A scaffold8336 Both SNP 0007.scaffold00024 250038 1 T A scaffold8336 Both SNP 0007.scaffold00024 250053 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 250084 1 G T scaffold8336 Both SNP 0007.scaffold00024 250123 1 C A scaffold8336 Both SNP 0007.scaffold00024 250168 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 250213 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 250225 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 250234 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 250258 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 250282 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 250321 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 250334 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 250338 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 250344 2 GA CG scaffold8336 ScafM SNP 0007.scaffold00024 250348 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 250377 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 250424 2 AG TA scaffold8336 ScafM SNP 0007.scaffold00024 250473 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 264933 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 264958 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 264973 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 265000 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 265045 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 265055 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 265117 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 265142 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 265210 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 265224 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 265312 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 265324 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 265515 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 266400 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 266447 2 AT .. scaffold8336 ScafM SNP 0007.scaffold00024 266489 1 T C scaffold8336 Both INDEL 0007.scaffold00024 266867 2 AG .. scaffold8336 Both SNP 0007.scaffold00024 266940 1 A C scaffold8336 Both SNP 0007.scaffold00024 266972 1 T C scaffold8336 Both INDEL 0007.scaffold00024 267050 2 .. TA scaffold8336 Both SNP 0007.scaffold00024 267070 1 A G scaffold8336 Both SNP 0007.scaffold00024 267186 1 A G scaffold8336 Both INDEL 0007.scaffold00024 267197 1 . A scaffold8336 Both SNP 0007.scaffold00024 267316 1 C A scaffold8336 Both SNP 0007.scaffold00024 267421 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 267619 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 267645 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 267661 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 267712 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 267743 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 267921 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 268023 1 C A scaffold4996 ScafM INDEL 0007.scaffold00024 268072 1 T . scaffold4996 ScafM INDEL 0007.scaffold00024 268162 1 T . scaffold4996 ScafM SNP 0007.scaffold00024 268184 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 268220 2 CT AG scaffold4996 ScafM SNP 0007.scaffold00024 268224 1 G T scaffold4996 ScafM SNP 0007.scaffold00024 268274 2 AT CC scaffold4996 ScafM SNP 0007.scaffold00024 268292 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 268318 1 T A scaffold4996 ScafM SNP 0007.scaffold00024 268348 2 CA AT scaffold4996 ScafM SNP 0007.scaffold00024 268353 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 268358 1 T C scaffold4996 ScafM SNP 0007.scaffold00024 268377 1 G C scaffold4996 ScafM INDEL 0007.scaffold00024 268435 1 . A scaffold4996 ScafM SNP 0007.scaffold00024 268455 1 T C scaffold4996 ScafM SNP 0007.scaffold00024 268512 1 C G scaffold4996 ScafM SNP 0007.scaffold00024 268530 1 C T scaffold4996 ScafM SNP 0007.scaffold00024 268552 1 A C scaffold4996 ScafM SNP 0007.scaffold00024 268565 1 C T scaffold4996 ScafM SNP 0007.scaffold00024 268586 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 268588 1 T A scaffold4996 ScafM SNP 0007.scaffold00024 268638 1 T A scaffold4996 ScafM SNP 0007.scaffold00024 268676 1 G T scaffold4996 ScafM SNP 0007.scaffold00024 268678 1 G C scaffold4996 ScafM SNP 0007.scaffold00024 268705 1 A G scaffold4996 ScafM SNP 0007.scaffold00024 268728 1 T G scaffold4996 ScafM INDEL 0007.scaffold00024 268733 1 G . scaffold4996 ScafM SNP 0007.scaffold00024 268747 1 A T scaffold4996 ScafM SNP 0007.scaffold00024 268815 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 268840 1 A T scaffold4996 ScafM SNP 0007.scaffold00024 268846 1 G T scaffold4996 ScafM SNP 0007.scaffold00024 268853 1 T C scaffold4996 ScafM SNP 0007.scaffold00024 268863 1 T C scaffold4996 ScafM SNP 0007.scaffold00024 268865 1 T A scaffold4996 ScafM SNP 0007.scaffold00024 268880 1 A G scaffold4996 ScafM SNP 0007.scaffold00024 268893 1 C A scaffold4996 ScafM SNP 0007.scaffold00024 268895 1 T A scaffold4996 ScafM INDEL 0007.scaffold00024 268899 1 A . scaffold4996 ScafM SNP 0007.scaffold00024 268914 1 C T scaffold4996 ScafM SNP 0007.scaffold00024 268916 1 A G scaffold4996 ScafM SNP 0007.scaffold00024 268921 1 G C scaffold4996 ScafM INDEL 0007.scaffold00024 268942 1 C . scaffold4996 ScafM SNP 0007.scaffold00024 268949 1 G C scaffold4996 ScafM SNP 0007.scaffold00024 269000 1 C T scaffold4996 ScafM INDEL 0007.scaffold00024 269015 1 . C scaffold4996 ScafM SNP 0007.scaffold00024 269020 1 T A scaffold4996 ScafM SNP 0007.scaffold00024 269038 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 269065 2 CG TA scaffold4996 ScafM SNP 0007.scaffold00024 269096 1 G A scaffold4996 ScafM SNP 0007.scaffold00024 269108 1 C T scaffold4996 ScafM SNP 0007.scaffold00024 269236 1 T G scaffold4996 ScafM SNP 0007.scaffold00024 269245 1 C A scaffold4996 ScafM INDEL 0007.scaffold00024 269257 1 A . scaffold4996 ScafM SNP 0007.scaffold00024 269542 1 C G scaffold4500 ScafM SNP 0007.scaffold00024 269551 1 T C scaffold4500 ScafM SNP 0007.scaffold00024 269575 2 AA TT scaffold4500 ScafM SNP 0007.scaffold00024 269605 1 G A scaffold4500 ScafM SNP 0007.scaffold00024 269641 1 A G scaffold4500 ReadM SNP 0007.scaffold00024 270967 1 G A - ReadM SNP 0007.scaffold00024 270997 1 A G - ScafM SNP 0007.scaffold00024 274845 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 274878 1 A C scaffold8336 Both SNP 0007.scaffold00024 275183 1 C T scaffold8336 Both SNP 0007.scaffold00024 275202 1 A G scaffold8336 Both SNP 0007.scaffold00024 275223 1 G C scaffold8336 Both SNP 0007.scaffold00024 275650 1 A T scaffold8336 ReadM SNP 0007.scaffold00024 275750 1 C T - ScafM SNP 0007.scaffold00024 276186 1 C T scaffold8336 Both SNP 0007.scaffold00024 276216 1 A G scaffold8336 Both SNP 0007.scaffold00024 276255 1 T A scaffold8336 Both SNP 0007.scaffold00024 276269 1 G T scaffold8336 Both SNP 0007.scaffold00024 276313 1 T C scaffold8336 Both INDEL 0007.scaffold00024 276377 2 .. TT scaffold8336 Both SNP 0007.scaffold00024 276606 1 G A scaffold8336 Both SNP 0007.scaffold00024 276662 1 A T scaffold8336 Both SNP 0007.scaffold00024 276682 1 G A scaffold8336 Both SNP 0007.scaffold00024 276823 1 G A scaffold8336 Both SNP 0007.scaffold00024 276825 1 T A scaffold8336 Both SNP 0007.scaffold00024 276899 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 276919 1 T G scaffold8336 Both SNP 0007.scaffold00024 277155 1 A T scaffold8336 Both SNP 0007.scaffold00024 277194 1 C A scaffold8336 Both SNP 0007.scaffold00024 277220 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 277425 1 A C scaffold8336 ScafM INDEL 0007.scaffold00024 277455 7 ACTCAAC ....... scaffold8336 Both SNP 0007.scaffold00024 277781 1 T G scaffold8336 Both SNP 0007.scaffold00024 277837 1 G A scaffold8336 Both SNP 0007.scaffold00024 277969 1 T G scaffold8336 Both SNP 0007.scaffold00024 278002 1 C T scaffold8336 Both SNP 0007.scaffold00024 278186 1 G A scaffold8336 Both SNP 0007.scaffold00024 278236 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 278289 1 A T scaffold8336 Both SNP 0007.scaffold00024 278294 1 A G scaffold8336 Both SNP 0007.scaffold00024 278318 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 278361 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 278403 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 278435 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 278601 1 G A scaffold8336 Both SNP 0007.scaffold00024 278687 1 A C scaffold8336 Both SNP 0007.scaffold00024 278697 1 G T scaffold8336 Both INDEL 0007.scaffold00024 278728 1 T . scaffold8336 ScafM SNP 0007.scaffold00024 279074 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 279250 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 279309 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 279412 2 GC AT scaffold8336 ScafM SNP 0007.scaffold00024 279440 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 279449 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 279478 1 T C scaffold8336 Both SNP 0007.scaffold00024 279578 1 T C scaffold8336 ReadM SNP 0007.scaffold00024 279704 1 T C - ScafM SNP 0007.scaffold00024 279909 2 TC GA scaffold8336 Both INDEL 0007.scaffold00024 279955 2 .. AG scaffold8336 Both SNP 0007.scaffold00024 279999 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 280055 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 280060 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 280064 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 280081 1 T C scaffold8336 Both SNP 0007.scaffold00024 280125 1 A C scaffold8336 Both SNP 0007.scaffold00024 280153 1 A T scaffold8336 Both SNP 0007.scaffold00024 280203 1 A C scaffold8336 Both SNP 0007.scaffold00024 280208 1 T A scaffold8336 Both SNP 0007.scaffold00024 280240 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 280300 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 280303 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 280306 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 280332 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 280355 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 280389 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 280392 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 280415 2 AT GG scaffold8336 ScafM SNP 0007.scaffold00024 280438 2 AA GG scaffold8336 ScafM SNP 0007.scaffold00024 280457 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 280479 15 ............... GTGGGCCACCACTCC scaffold8336 Both SNP 0007.scaffold00024 280511 1 A G scaffold8336 Both SNP 0007.scaffold00024 280581 1 T C scaffold8336 Both SNP 0007.scaffold00024 280593 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 280602 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 280613 2 AG TA scaffold8336 ScafM SNP 0007.scaffold00024 280638 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 280642 1 A G scaffold8336 Both SNP 0007.scaffold00024 280665 1 T C scaffold8336 Both SNP 0007.scaffold00024 280703 1 T C scaffold8336 Both SNP 0007.scaffold00024 280708 1 T G scaffold8336 Both SNP 0007.scaffold00024 280767 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 280803 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 280852 1 G T scaffold8336 ScafM INDEL 0007.scaffold00024 280956 1 . A scaffold8336 ScafM SNP 0007.scaffold00024 281033 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 281395 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 281422 2 GC AT scaffold8336 ScafM SNP 0007.scaffold00024 281426 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 281570 1 C A scaffold8336 ScafM INDEL 0007.scaffold00024 281640 1 . T scaffold8336 ScafM SNP 0007.scaffold00024 281676 2 CA GT scaffold8336 ScafM SNP 0007.scaffold00024 281717 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 281757 1 A C scaffold8336 ScafM INDEL 0007.scaffold00024 281786 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 281795 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 281808 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 281823 1 T G scaffold8336 Both SNP 0007.scaffold00024 281866 1 A G scaffold8336 Both SNP 0007.scaffold00024 282052 1 C T scaffold8336 Both SNP 0007.scaffold00024 282158 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 282289 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 282382 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 282415 2 CG TA scaffold8336 ScafM INDEL 0007.scaffold00024 282458 35 ................................... TTTTTTTTTGAGTTGAATCGATTTAGGTATGCAAA scaffold8336 ScafM SNP 0007.scaffold00024 282530 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 283275 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 283397 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 283415 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 283463 1 C T scaffold8336 ReadM SNP 0007.scaffold00024 284009 1 T C - ReadM SNP 0007.scaffold00024 284090 1 T C - ReadM SNP 0007.scaffold00024 284097 1 C T - ReadM SNP 0007.scaffold00024 284121 1 A G - ScafM SNP 0007.scaffold00024 286489 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 286491 1 T A scaffold8336 ReadM SNP 0007.scaffold00024 286561 1 C A - ReadM SNP 0007.scaffold00024 286566 1 T C - ReadM SNP 0007.scaffold00024 286655 1 C T - ReadM SNP 0007.scaffold00024 286717 1 T G - ReadM SNP 0007.scaffold00024 286795 1 T C - ReadM SNP 0007.scaffold00024 286858 1 C T - ReadM SNP 0007.scaffold00024 286918 1 T A - Both SNP 0007.scaffold00024 286960 1 T C scaffold8336 Both SNP 0007.scaffold00024 286962 1 T C scaffold8336 ReadM SNP 0007.scaffold00024 287065 1 T C - ReadM SNP 0007.scaffold00024 287606 1 G A - ReadM SNP 0007.scaffold00024 287677 1 C T - ReadM SNP 0007.scaffold00024 287851 1 C T - ReadM SNP 0007.scaffold00024 287892 1 G A - ReadM SNP 0007.scaffold00024 288022 1 C A - ReadM SNP 0007.scaffold00024 288080 1 A G - ReadM INDEL 0007.scaffold00024 288128 1 . T - ReadM SNP 0007.scaffold00024 288202 1 G A - ReadM SNP 0007.scaffold00024 288309 1 G A - ReadM SNP 0007.scaffold00024 288324 1 T C - ReadM SNP 0007.scaffold00024 288330 1 C G - ReadM SNP 0007.scaffold00024 288368 1 C T - ReadM SNP 0007.scaffold00024 288388 1 G A - ReadM SNP 0007.scaffold00024 288529 1 G C - ReadM SNP 0007.scaffold00024 288583 1 T G - ReadM SNP 0007.scaffold00024 288599 1 T C - ReadM SNP 0007.scaffold00024 288620 1 G A - ReadM SNP 0007.scaffold00024 288823 1 G A - ReadM SNP 0007.scaffold00024 290270 1 C T - ReadM SNP 0007.scaffold00024 290279 1 A G - ReadM SNP 0007.scaffold00024 290500 1 C T - ReadM SNP 0007.scaffold00024 290529 1 A T - ReadM SNP 0007.scaffold00024 290563 1 A G - ReadM SNP 0007.scaffold00024 290704 1 T C - ReadM SNP 0007.scaffold00024 290730 1 C T - ReadM SNP 0007.scaffold00024 290763 1 G A - ReadM SNP 0007.scaffold00024 290813 1 G T - ReadM SNP 0007.scaffold00024 290886 1 A T - ReadM SNP 0007.scaffold00024 290937 1 C T - ScafM SNP 0007.scaffold00024 291576 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 291602 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 291641 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 291703 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 291741 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 291748 2 CA TG scaffold8336 ScafM SNP 0007.scaffold00024 291765 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 291774 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 291822 2 TC CT scaffold8336 ScafM SNP 0007.scaffold00024 291834 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 291934 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 291964 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 291967 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 291985 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 292002 1 C T scaffold8336 ScafM INDEL 0007.scaffold00024 292027 6 ATTTTC ...... scaffold8336 ScafM INDEL 0007.scaffold00024 292034 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 292038 2 CG TA scaffold8336 ScafM INDEL 0007.scaffold00024 292119 1 . T scaffold8336 ScafM INDEL 0007.scaffold00024 292121 1 . G scaffold8336 ScafM INDEL 0007.scaffold00024 292143 3 ... GTG scaffold8336 ScafM INDEL 0007.scaffold00024 292162 1 G . scaffold8336 ScafM SNP 0007.scaffold00024 292768 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 292813 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 292972 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 293081 1 T . scaffold8336 ScafM INDEL 0007.scaffold00024 293088 7 CCCCCCC ....... scaffold8336 ScafM SNP 0007.scaffold00024 293205 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 293213 1 T C scaffold8336 ReadM SNP 0007.scaffold00024 293383 1 A G - ReadM SNP 0007.scaffold00024 293432 1 T C - ReadM SNP 0007.scaffold00024 293435 1 T G - ReadM SNP 0007.scaffold00024 293561 1 A T - Both INDEL 0007.scaffold00024 293660 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 293662 1 A G scaffold8336 Both SNP 0007.scaffold00024 293700 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 293782 1 C A scaffold8336 Both INDEL 0007.scaffold00024 294016 1 . A scaffold8336 Both SNP 0007.scaffold00024 294072 1 G A scaffold8336 Both SNP 0007.scaffold00024 294087 1 A C scaffold8336 Both SNP 0007.scaffold00024 294095 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 294429 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 294434 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 294436 1 T C scaffold8336 ReadM INDEL 0007.scaffold00024 294631 1 A . - ScafM SNP 0007.scaffold00024 294982 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 294989 1 G C scaffold8336 ScafM INDEL 0007.scaffold00024 295002 1 . G scaffold8336 ScafM SNP 0007.scaffold00024 295026 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 295864 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 295894 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 295932 1 A C scaffold8336 ScafM SNP 0007.scaffold00024 295940 1 A C scaffold8336 ScafM INDEL 0007.scaffold00024 295945 8 ........ TCACGTAG scaffold8336 ScafM SNP 0007.scaffold00024 295974 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 295995 36 AGTTATCTCAATCCTATTCCTTCCCCTTCAATCTTG .................................... scaffold8336 ScafM INDEL 0007.scaffold00024 296035 2 AC .. scaffold8336 ScafM INDEL 0007.scaffold00024 296038 7 CGGGCAA ....... scaffold8336 ScafM INDEL 0007.scaffold00024 296048 4 TTAT .... scaffold8336 ScafM INDEL 0007.scaffold00024 296069 1 C . scaffold8336 ScafM SNP 0007.scaffold00024 296091 1 G C scaffold8336 Both SNP 0007.scaffold00024 296285 1 A T scaffold8336 Both SNP 0007.scaffold00024 296319 1 C T scaffold8336 Both SNP 0007.scaffold00024 296453 1 T C scaffold8336 Both INDEL 0007.scaffold00024 296487 2 TG .. scaffold8336 Both SNP 0007.scaffold00024 296573 1 T C scaffold8336 Both SNP 0007.scaffold00024 296740 1 T A scaffold8336 Both SNP 0007.scaffold00024 296793 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 296952 2 .. TT scaffold8336 Both SNP 0007.scaffold00024 297219 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 297288 1 G A scaffold8336 ScafM INDEL 0007.scaffold00024 297290 1 . A scaffold8336 ScafM INDEL 0007.scaffold00024 297299 3 GGC ... scaffold8336 ScafM SNP 0007.scaffold00024 297350 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 297354 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 297356 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 297370 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 297385 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 297400 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 297413 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 297431 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 297434 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 297457 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 297501 3 TCT ... scaffold8336 ScafM SNP 0007.scaffold00024 297559 2 AG TT scaffold8336 ScafM SNP 0007.scaffold00024 297564 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 297637 1 C A scaffold8336 ScafM SNP 0007.scaffold00024 297689 2 GT TA scaffold8336 ScafM INDEL 0007.scaffold00024 297701 1 C . scaffold8336 ScafM INDEL 0007.scaffold00024 297708 1 A . scaffold8336 ScafM SNP 0007.scaffold00024 297717 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 297740 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 297747 1 C G scaffold8336 ScafM SNP 0007.scaffold00024 297791 1 G C scaffold8336 ScafM SNP 0007.scaffold00024 297796 1 C T scaffold8336 Both SNP 0007.scaffold00024 297807 1 T A scaffold8336 Both SNP 0007.scaffold00024 297856 1 C T scaffold8336 Both SNP 0007.scaffold00024 297924 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 298007 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 298071 2 AT TA scaffold8336 Both SNP 0007.scaffold00024 298116 1 A G scaffold8336 Both INDEL 0007.scaffold00024 298276 1 . T scaffold8336 Both SNP 0007.scaffold00024 298306 1 T G scaffold8336 Both INDEL 0007.scaffold00024 298310 1 A . scaffold8336 Both SNP 0007.scaffold00024 298391 1 T A scaffold8336 Both SNP 0007.scaffold00024 298427 1 G A scaffold8336 Both SNP 0007.scaffold00024 298436 1 T G scaffold8336 ScafM SNP 0007.scaffold00024 298476 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 298487 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 298489 1 . C scaffold8336 ScafM SNP 0007.scaffold00024 298528 2 CT AA scaffold8336 ScafM SNP 0007.scaffold00024 298548 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 298556 1 T G scaffold8336 Both SNP 0007.scaffold00024 298584 1 A T scaffold8336 ScafM SNP 0007.scaffold00024 298604 1 A T scaffold8336 Both SNP 0007.scaffold00024 298611 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 298673 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 298678 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 298683 1 G A scaffold8336 Both SNP 0007.scaffold00024 298703 1 G A scaffold8336 Both SNP 0007.scaffold00024 298798 1 A T scaffold8336 Both SNP 0007.scaffold00024 298800 1 G C scaffold8336 Both SNP 0007.scaffold00024 298855 1 A G scaffold8336 Both SNP 0007.scaffold00024 298901 1 G T scaffold8336 Both SNP 0007.scaffold00024 298959 1 T C scaffold8336 Both SNP 0007.scaffold00024 298972 1 C T scaffold8336 Both SNP 0007.scaffold00024 299008 1 A G scaffold8336 Both INDEL 0007.scaffold00024 299068 1 C . scaffold8336 ScafM INDEL 0007.scaffold00024 299187 3 ... AAA scaffold8336 ScafM SNP 0007.scaffold00024 299191 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 299194 1 C T scaffold8336 ScafM INDEL 0007.scaffold00024 299196 3 ... TAC scaffold8336 ScafM SNP 0007.scaffold00024 299227 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 299229 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 299231 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 299236 1 G T scaffold8336 ScafM SNP 0007.scaffold00024 299246 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 299253 1 . T scaffold8336 Both SNP 0007.scaffold00024 299279 1 G C scaffold8336 Both SNP 0007.scaffold00024 299305 1 G A scaffold8336 Both INDEL 0007.scaffold00024 299371 2 TA .. scaffold8336 Both SNP 0007.scaffold00024 299387 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 299399 1 G A scaffold8336 Both SNP 0007.scaffold00024 299448 1 A G scaffold8336 ScafM INDEL 0007.scaffold00024 299471 1 G . scaffold8336 ScafM SNP 0007.scaffold00024 299525 1 T C scaffold8336 Both SNP 0007.scaffold00024 299536 2 CA TG scaffold8336 Both SNP 0007.scaffold00024 299645 1 C A scaffold8336 Both SNP 0007.scaffold00024 299675 1 C T scaffold8336 ScafM SNP 0007.scaffold00024 299692 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 299695 2 CA TC scaffold8336 ScafM SNP 0007.scaffold00024 299752 1 A T scaffold8336 ScafM INDEL 0007.scaffold00024 299760 6 ...... CAGTAG scaffold8336 Both SNP 0007.scaffold00024 299808 1 C A scaffold8336 Both INDEL 0007.scaffold00024 299917 1 . C scaffold8336 Both SNP 0007.scaffold00024 299934 1 G A scaffold8336 Both SNP 0007.scaffold00024 299981 1 G T scaffold8336 Both SNP 0007.scaffold00024 300075 1 G T scaffold8336 Both SNP 0007.scaffold00024 300150 1 T G scaffold8336 ReadM SNP 0007.scaffold00024 300186 1 A G - ReadM INDEL 0007.scaffold00024 300227 1 . G - ReadM SNP 0007.scaffold00024 300260 1 T C - ReadM SNP 0007.scaffold00024 300313 1 C T - ReadM SNP 0007.scaffold00024 300367 1 C T - ScafM INDEL 0007.scaffold00024 300421 4 .... TAAT scaffold8336 ScafM SNP 0007.scaffold00024 300434 1 A T scaffold8336 ScafM INDEL 0007.scaffold00024 300471 10 .......... GACCCACCCT scaffold8336 ScafM SNP 0007.scaffold00024 300495 1 A T scaffold8336 Both SNP 0007.scaffold00024 300579 1 A G scaffold8336 Both SNP 0007.scaffold00024 300587 1 T A scaffold8336 Both SNP 0007.scaffold00024 300602 1 T C scaffold8336 ReadM SNP 0007.scaffold00024 300663 1 C T - Both SNP 0007.scaffold00024 300795 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 301391 1 A G scaffold8336 ScafM SNP 0007.scaffold00024 301791 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 301816 1 G A scaffold8336 ScafM SNP 0007.scaffold00024 301833 1 T C scaffold8336 ScafM INDEL 0007.scaffold00024 301845 1 . C scaffold8336 ScafM SNP 0007.scaffold00024 301855 1 T A scaffold8336 ScafM SNP 0007.scaffold00024 301861 1 A C scaffold8336 Both SNP 0007.scaffold00024 302353 1 G C scaffold8336 Both SNP 0007.scaffold00024 302369 1 G A scaffold8336 Both SNP 0007.scaffold00024 302377 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 302410 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 302414 1 T C scaffold8336 ScafM SNP 0007.scaffold00024 302423 1 C T scaffold8336 ReadM SNP 0007.scaffold00024 302465 1 A G - ReadM SNP 0007.scaffold00024 302624 1 G A - ReadM SNP 0007.scaffold00024 302633 1 G T - ReadM SNP 0007.scaffold00024 302847 1 A G - ReadM INDEL 0007.scaffold00024 302852 1 . A - Both SNP 0007.scaffold00024 303011 1 T C scaffold11484 ReadM INDEL 0007.scaffold00024 303077 1 T . - ReadM SNP 0007.scaffold00024 303084 1 C G - ReadM SNP 0007.scaffold00024 303116 1 T C - ReadM SNP 0007.scaffold00024 303160 1 G T - ReadM SNP 0007.scaffold00024 303355 1 A T - ReadM SNP 0007.scaffold00024 303383 1 G C - Both SNP 0007.scaffold00024 303433 1 T C scaffold11484 ScafM INDEL 0007.scaffold00024 303473 2 .. GT scaffold11484 ScafM SNP 0007.scaffold00024 303475 1 A G scaffold11484 ScafM SNP 0007.scaffold00024 303489 1 G A scaffold11484 ScafM SNP 0007.scaffold00024 303495 1 T A scaffold11484 ScafM INDEL 0007.scaffold00024 303504 2 AT .G scaffold11484 ScafM SNP 0007.scaffold00024 303549 2 AC GT scaffold11484 ScafM SNP 0007.scaffold00024 303559 1 C T scaffold11484 ScafM INDEL 0007.scaffold00024 303584 1 T . scaffold11484 Both SNP 0007.scaffold00024 303619 1 A T scaffold11484 ReadM SNP 0007.scaffold00024 303652 1 A G - ReadM SNP 0007.scaffold00024 303662 1 A C - ScafM INDEL 0007.scaffold00024 303821 1 . T scaffold11484 ScafM SNP 0007.scaffold00024 303868 1 A G scaffold11484 ScafM SNP 0007.scaffold00024 303888 1 T G scaffold11484 ScafM SNP 0007.scaffold00024 303893 1 T C scaffold11484 Both SNP 0007.scaffold00024 303906 1 C A scaffold11484 ReadM SNP 0007.scaffold00024 303983 1 A T - ReadM SNP 0007.scaffold00024 304254 1 T C - ReadM SNP 0007.scaffold00024 304306 1 A G - ReadM SNP 0007.scaffold00024 304392 1 A T - ReadM SNP 0007.scaffold00024 304459 1 G A - Both SNP 0007.scaffold00024 304655 1 A C scaffold11484 Both SNP 0007.scaffold00024 304722 1 C A scaffold11484 ReadM SNP 0007.scaffold00024 304821 1 T C - ReadM INDEL 0007.scaffold00024 304831 1 G . - ReadM SNP 0007.scaffold00024 305013 1 T A - ReadM SNP 0007.scaffold00024 305100 1 T G - ReadM SNP 0007.scaffold00024 305170 1 C G - ReadM SNP 0007.scaffold00024 306278 1 T A - ReadM SNP 0007.scaffold00024 306290 1 A G - ReadM SNP 0007.scaffold00024 306308 1 T C - ReadM SNP 0007.scaffold00024 306416 1 A G - ReadM INDEL 0007.scaffold00024 306427 1 T . - ReadM SNP 0007.scaffold00024 306841 1 T A - ReadM SNP 0007.scaffold00024 306849 1 C T - ScafM SNP 0007.scaffold00024 307090 1 A G scaffold11484 ScafM SNP 0007.scaffold00024 307114 1 A C scaffold11484 ScafM SNP 0007.scaffold00024 307126 1 C T scaffold11484 ScafM INDEL 0007.scaffold00024 307133 1 . G scaffold11484 ScafM SNP 0007.scaffold00024 307146 1 T C scaffold11484 ScafM SNP 0007.scaffold00024 307156 2 CC TT scaffold11484 ScafM INDEL 0007.scaffold00024 307183 1 . T scaffold11484 ScafM SNP 0007.scaffold00024 307189 1 T G scaffold11484 ScafM SNP 0007.scaffold00024 307197 1 G A scaffold11484 ScafM SNP 0007.scaffold00024 307224 1 T A scaffold11484 ScafM SNP 0007.scaffold00024 307325 2 CC TT scaffold11484 ScafM SNP 0007.scaffold00024 307354 1 A G scaffold11484 ScafM SNP 0007.scaffold00024 307365 1 G A scaffold11484 ScafM SNP 0007.scaffold00024 307390 1 C G scaffold11484 ScafM INDEL 0007.scaffold00024 307417 1 C . scaffold11484 ScafM SNP 0007.scaffold00024 307424 1 G C scaffold11484 ScafM INDEL 0007.scaffold00024 307476 2 .. TT scaffold11484 ScafM SNP 0007.scaffold00024 307498 1 G T scaffold11484 ScafM SNP 0007.scaffold00024 307517 1 C T scaffold11484 Both SNP 0007.scaffold00024 307546 1 G A scaffold11484 Both SNP 0007.scaffold00024 307552 1 C G scaffold11484 Both SNP 0007.scaffold00024 307575 1 A G scaffold11484 Both SNP 0007.scaffold00024 307640 1 G A scaffold11484 Both SNP 0007.scaffold00024 307677 1 A G scaffold11484 ReadM SNP 0007.scaffold00024 307708 1 T C - ReadM SNP 0007.scaffold00024 307714 1 G A - ReadM SNP 0007.scaffold00024 307794 1 G A - ReadM SNP 0007.scaffold00024 307823 1 G C - ReadM SNP 0007.scaffold00024 307835 1 C A - ReadM SNP 0007.scaffold00024 307966 1 G A - ReadM INDEL 0007.scaffold00024 308020 1 . T - ReadM SNP 0007.scaffold00024 308125 1 T C - ReadM INDEL 0007.scaffold00024 308448 1 T . - ReadM SNP 0007.scaffold00024 308863 1 C T - ReadM SNP 0007.scaffold00024 308877 1 A G - Both SNP 0007.scaffold00024 308881 1 G A scaffold11484 ScafM SNP 0007.scaffold00024 308918 1 G A scaffold11484 ScafM INDEL 0007.scaffold00024 308979 14 ACTTCGGAGGAAGT .............. scaffold11484 ScafM SNP 0007.scaffold00024 309047 1 T G scaffold11484 ScafM INDEL 0007.scaffold00024 309087 1 A . scaffold11484 ScafM INDEL 0007.scaffold00024 309091 5 ACAAA ...GT scaffold11484 ScafM SNP 0007.scaffold00024 309099 2 TT GG scaffold11484 ScafM INDEL 0007.scaffold00024 309101 2 .. GA scaffold11484 ScafM SNP 0007.scaffold00024 309108 1 G A scaffold11484 ScafM SNP 0007.scaffold00024 309114 1 C T scaffold11484 ScafM SNP 0007.scaffold00024 309116 1 T A scaffold11484 ScafM SNP 0007.scaffold00024 309138 1 C T scaffold11484 ScafM INDEL 0007.scaffold00024 309205 2 GG .A scaffold11484 ScafM SNP 0007.scaffold00024 309209 3 GGG CCT scaffold11484 ScafM SNP 0007.scaffold00024 309213 2 GG AA scaffold11484 ScafM INDEL 0007.scaffold00024 309216 2 GG .. scaffold11484 ScafM SNP 0007.scaffold00024 309229 3 AAA GGG scaffold11484 ScafM SNP 0007.scaffold00024 309241 1 G T scaffold11484 ScafM SNP 0007.scaffold00024 309255 1 T G scaffold11484 Both SNP 0007.scaffold00024 309270 1 T A scaffold11484 Both SNP 0007.scaffold00024 309276 1 G T scaffold11484 Both SNP 0007.scaffold00024 309397 1 C G scaffold11484 Both SNP 0007.scaffold00024 309414 1 C A scaffold11484 Both SNP 0007.scaffold00024 309496 1 C T scaffold11484 Both SNP 0007.scaffold00024 309502 1 A T scaffold11484 ScafM SNP 0007.scaffold00024 309610 1 G A scaffold11484 ReadM SNP 0007.scaffold00024 309747 1 T C - ReadM SNP 0007.scaffold00024 309879 1 C T - ReadM SNP 0007.scaffold00024 309905 1 G C - ReadM SNP 0007.scaffold00024 309930 1 T G - Both SNP 0007.scaffold00024 310034 1 C T C19770149 Both SNP 0007.scaffold00024 310055 1 A T C19770149 ScafM SNP 0007.scaffold00024 310070 1 A G C19770149 ScafM SNP 0007.scaffold00024 310080 1 G A C19770149 ScafM SNP 0007.scaffold00024 310103 1 C T C19770149 ScafM INDEL 0007.scaffold00024 310139 2 .. TA C19770149 Both SNP 0007.scaffold00024 310169 1 A G C19770149 Both SNP 0007.scaffold00024 310180 1 T C C19770149 ScafM SNP 0007.scaffold00024 310290 1 C A C19770149 ScafM SNP 0007.scaffold00024 310292 1 A G C19770149 Both SNP 0007.scaffold00024 310336 1 C G C19770149 Both SNP 0007.scaffold00024 310447 1 T C C19770149 Both INDEL 0007.scaffold00024 310533 1 . T C19770149 Both SNP 0007.scaffold00024 310558 1 C T C19770149 Both SNP 0007.scaffold00024 310577 1 A G C19770149 ScafM SNP 0007.scaffold00024 310597 1 G A C19770149 ScafM SNP 0007.scaffold00024 310619 1 A G C19770149 ScafM SNP 0007.scaffold00024 310667 1 T A C19770149 ScafM SNP 0007.scaffold00024 310676 1 T C C19770149 ScafM SNP 0007.scaffold00024 310707 1 C T C19770149 ScafM SNP 0007.scaffold00024 310716 1 A G C19770149 ScafM INDEL 0007.scaffold00024 310752 7 ....... TATGCAT C19770149 ScafM INDEL 0007.scaffold00024 310754 4 .... GAAA C19770149 ScafM INDEL 0007.scaffold00024 310755 1 . T C19770149 ScafM INDEL 0007.scaffold00024 310758 7 ....... TTTTACA C19770149 ScafM INDEL 0007.scaffold00024 310759 1 . G C19770149 ScafM INDEL 0007.scaffold00024 310761 5 ..... GACCA C19770149 ScafM INDEL 0007.scaffold00024 310764 1 . G C19770149 ScafM INDEL 0007.scaffold00024 310766 11 ........... ACAAAAGAATA C19770149 ScafM INDEL 0007.scaffold00024 310767 1 . T C19770149 Both SNP 0007.scaffold00024 310855 1 G A C19770149 ScafM SNP 0007.scaffold00024 311016 1 T G C19770149 ScafM SNP 0007.scaffold00024 311020 1 G A C19770149 ScafM SNP 0007.scaffold00024 311031 1 C A C19770149 ScafM SNP 0007.scaffold00024 311036 1 C T C19770149 ScafM SNP 0007.scaffold00024 311040 1 T A C19770149 Both SNP 0007.scaffold00024 311174 1 A G C19770149 Both SNP 0007.scaffold00024 311196 1 A C C19770149 Both SNP 0007.scaffold00024 311206 1 T G C19770149 Both SNP 0007.scaffold00024 311256 1 A G C19770149 Both SNP 0007.scaffold00024 311319 1 A G C19770149 Both SNP 0007.scaffold00024 311391 1 G T C19770149 Both SNP 0007.scaffold00024 311399 1 G A C19770149 Both SNP 0007.scaffold00024 311471 1 A C C19770149 Both SNP 0007.scaffold00024 311769 1 G A C19770149 Both SNP 0007.scaffold00024 311835 1 G A C19770149 ScafM SNP 0007.scaffold00024 311896 1 A T C19770149 Both SNP 0007.scaffold00024 311937 1 G A C19770149 Both SNP 0007.scaffold00024 311946 1 C T C19770149 ScafM INDEL 0007.scaffold00024 311960 3 ... TAG C19770149 Both SNP 0007.scaffold00024 311991 1 G A C19770149 Both SNP 0007.scaffold00024 312029 1 G A C19770149 Both SNP 0007.scaffold00024 312080 1 T A C19770149 Both SNP 0007.scaffold00024 312119 1 T A C19770149 Both SNP 0007.scaffold00024 312146 1 A C C19770149 Both INDEL 0007.scaffold00024 312195 1 . G C19770149 Both SNP 0007.scaffold00024 312213 1 C T C19770149 ScafM SNP 0007.scaffold00024 312246 1 G A C19770149 ScafM SNP 0007.scaffold00024 312254 1 T C C19770149 ScafM SNP 0007.scaffold00024 312262 1 G T C19770149 ScafM SNP 0007.scaffold00024 312265 1 T C C19770149 ScafM INDEL 0007.scaffold00024 312271 4 TAAA .... C19770149 Both SNP 0007.scaffold00024 312302 1 C G C19770149 Both SNP 0007.scaffold00024 312388 1 C T C19770149 Both SNP 0007.scaffold00024 312416 1 G C C19770149 ScafM INDEL 0007.scaffold00024 312452 3 ... GTG C19770149 Both SNP 0007.scaffold00024 312489 1 A G C19770149 ReadM SNP 0007.scaffold00024 312560 1 G A - ReadM INDEL 0007.scaffold00024 312590 1 A . - ReadM SNP 0007.scaffold00024 312650 1 T C - ReadM SNP 0007.scaffold00024 312718 1 C G - Both SNP 0007.scaffold00024 312867 1 A C scaffold11484 ReadM SNP 0007.scaffold00024 312964 1 G A - Both SNP 0007.scaffold00024 313209 1 C T scaffold11484 ScafM INDEL 0007.scaffold00024 313266 10 AAAATGTTTA .......... scaffold11484 ScafM SNP 0007.scaffold00024 313316 1 A G scaffold11484 Both SNP 0007.scaffold00024 313337 1 C T scaffold11484 ScafM SNP 0007.scaffold00024 313344 1 T G scaffold11484 Both SNP 0007.scaffold00024 313399 1 T C scaffold11484 Both SNP 0007.scaffold00024 313449 1 T C scaffold11484 Both SNP 0007.scaffold00024 313529 1 T C scaffold11484 ScafM SNP 0007.scaffold00024 314002 1 G T scaffold11484 ScafM SNP 0007.scaffold00024 314548 1 A C scaffold11484 Both SNP 0007.scaffold00024 314552 1 G C scaffold11484 ReadM INDEL 0007.scaffold00024 314671 1 A . - ReadM SNP 0007.scaffold00024 314996 1 G A - ScafM SNP 0007.scaffold00024 315021 2 CC TT scaffold11484 ReadM SNP 0007.scaffold00024 315456 1 G A - ScafM SNP 0007.scaffold00024 315635 1 A G scaffold4026 Both SNP 0007.scaffold00024 315686 1 A G scaffold4026 Both SNP 0007.scaffold00024 315820 1 C T scaffold4026 ReadM SNP 0007.scaffold00024 316222 1 T C - ReadM SNP 0007.scaffold00024 316388 1 T G - Both SNP 0007.scaffold00024 316679 1 G A scaffold4026 Both SNP 0007.scaffold00024 316692 1 G A scaffold4026 ScafM SNP 0007.scaffold00024 316748 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 316960 1 A C scaffold4026 ScafM SNP 0007.scaffold00024 317143 1 G A scaffold4026 ReadM SNP 0007.scaffold00024 318125 1 T C - Both SNP 0007.scaffold00024 318650 1 C A scaffold4026 Both SNP 0007.scaffold00024 318707 1 A G scaffold4026 ScafM SNP 0007.scaffold00024 318717 1 C T scaffold4026 ReadM SNP 0007.scaffold00024 318874 1 T C - ReadM SNP 0007.scaffold00024 321378 1 G C - ReadM SNP 0007.scaffold00024 321451 1 A G - ReadM SNP 0007.scaffold00024 321971 1 T C - ReadM SNP 0007.scaffold00024 322840 1 T A - Both SNP 0007.scaffold00024 322982 1 C G scaffold4026 Both SNP 0007.scaffold00024 323033 1 A G scaffold4026 ReadM SNP 0007.scaffold00024 323298 1 A T - ReadM SNP 0007.scaffold00024 323435 1 T C - ReadM SNP 0007.scaffold00024 323617 1 G A - ReadM SNP 0007.scaffold00024 323621 1 C T - ReadM SNP 0007.scaffold00024 323971 1 T C - Both SNP 0007.scaffold00024 324149 1 G A scaffold4026 ReadM SNP 0007.scaffold00024 324962 1 T C - ReadM SNP 0007.scaffold00024 326426 1 G T - ReadM SNP 0007.scaffold00024 326451 1 G A - ReadM SNP 0007.scaffold00024 326602 1 A C - ReadM SNP 0007.scaffold00024 326753 1 A T - Both SNP 0007.scaffold00024 326963 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 327369 1 C A scaffold4026 Both SNP 0007.scaffold00024 327517 1 C T scaffold4026 ReadM SNP 0007.scaffold00024 327663 1 T C - ReadM INDEL 0007.scaffold00024 327791 2 .. TC - ReadM SNP 0007.scaffold00024 327862 1 C A - ReadM SNP 0007.scaffold00024 328790 1 A G - ReadM SNP 0007.scaffold00024 344754 1 T C - ReadM SNP 0007.scaffold00024 344942 1 T C - ReadM SNP 0007.scaffold00024 345007 1 T A - ReadM SNP 0007.scaffold00024 345019 1 C T - ScafM SNP 0007.scaffold00024 345116 1 G A scaffold4026 ReadM SNP 0007.scaffold00024 345233 1 G A - ReadM SNP 0007.scaffold00024 345470 1 G A - ReadM SNP 0007.scaffold00024 345698 1 A G - ReadM SNP 0007.scaffold00024 345813 1 T C - ReadM SNP 0007.scaffold00024 345869 1 G A - ReadM SNP 0007.scaffold00024 345927 1 T C - ReadM SNP 0007.scaffold00024 346102 1 T C - ReadM SNP 0007.scaffold00024 346374 1 C T - ReadM SNP 0007.scaffold00024 346942 1 C T - ReadM SNP 0007.scaffold00024 346987 1 A G - Both SNP 0007.scaffold00024 347216 1 A G scaffold4026 Both SNP 0007.scaffold00024 347254 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 348059 1 G A scaffold4026 Both SNP 0007.scaffold00024 348124 1 T A scaffold4026 Both SNP 0007.scaffold00024 349285 1 G C scaffold4026 Both SNP 0007.scaffold00024 349905 1 T C scaffold4026 ScafM SNP 0007.scaffold00024 350243 1 C T scaffold4026 Both SNP 0007.scaffold00024 350358 1 C A scaffold4026 Both SNP 0007.scaffold00024 350608 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 351009 1 G A scaffold4026 Both SNP 0007.scaffold00024 351053 1 T C scaffold4026 Both SNP 0007.scaffold00024 351118 1 T G scaffold4026 ReadM INDEL 0007.scaffold00024 351158 1 A . - ReadM SNP 0007.scaffold00024 351400 1 T C - Both SNP 0007.scaffold00024 351589 1 T C scaffold4026 Both SNP 0007.scaffold00024 351605 1 T A scaffold4026 ScafM SNP 0007.scaffold00024 351843 1 G A scaffold4026 Both SNP 0007.scaffold00024 352019 1 G T scaffold4026 ScafM INDEL 0007.scaffold00024 352055 1 . A scaffold4026 ReadM SNP 0007.scaffold00024 352193 1 T C - ScafM SNP 0007.scaffold00024 352728 1 C T scaffold4026 ReadM SNP 0007.scaffold00024 352896 1 G A - Both SNP 0007.scaffold00024 353576 1 A G scaffold4026 ScafM SNP 0007.scaffold00024 353631 1 C A scaffold4026 Both SNP 0007.scaffold00024 353827 1 G T scaffold4026 Both SNP 0007.scaffold00024 354090 1 A G scaffold4026 ScafM INDEL 0007.scaffold00024 354799 1 . T scaffold4026 Both SNP 0007.scaffold00024 355030 1 C G scaffold4026 Both SNP 0007.scaffold00024 355247 1 A C scaffold4026 Both SNP 0007.scaffold00024 355335 1 T C scaffold4026 Both SNP 0007.scaffold00024 355543 1 T C scaffold4026 Both SNP 0007.scaffold00024 355545 1 G A scaffold4026 Both SNP 0007.scaffold00024 355847 1 G A scaffold4026 Both SNP 0007.scaffold00024 356650 1 T A scaffold4026 Both SNP 0007.scaffold00024 357022 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 357369 1 C T scaffold4026 Both SNP 0007.scaffold00024 357701 1 A G scaffold4026 Both SNP 0007.scaffold00024 358614 1 G A scaffold4026 Both SNP 0007.scaffold00024 358685 1 T G scaffold4026 ScafM INDEL 0007.scaffold00024 358828 21 ..................... ACAACAACAACAACAACAACA scaffold4026 ScafM SNP 0007.scaffold00024 359426 1 T A scaffold4026 Both SNP 0007.scaffold00024 359447 1 T A scaffold4026 ScafM SNP 0007.scaffold00024 359686 1 G A scaffold4026 Both SNP 0007.scaffold00024 359865 1 T C scaffold4026 Both SNP 0007.scaffold00024 360085 1 T A scaffold4026 Both SNP 0007.scaffold00024 360534 1 A G scaffold4026 Both SNP 0007.scaffold00024 360850 1 T C scaffold4026 Both INDEL 0007.scaffold00024 361346 1 . A scaffold4026 ScafM SNP 0007.scaffold00024 361352 1 G A scaffold4026 ScafM SNP 0007.scaffold00024 361749 1 T C scaffold4026 Both SNP 0007.scaffold00024 361842 1 C T scaffold4026 ScafM INDEL 0007.scaffold00024 362390 4 GGCA .... scaffold4026 Both SNP 0007.scaffold00024 362524 1 T C scaffold4026 Both SNP 0007.scaffold00024 362997 1 C G scaffold4026 Both SNP 0007.scaffold00024 363039 1 G T scaffold4026 Both SNP 0007.scaffold00024 363206 1 G T scaffold4026 Both SNP 0007.scaffold00024 363667 1 G A scaffold4026 ScafM SNP 0007.scaffold00024 363680 1 A G scaffold4026 ScafM SNP 0007.scaffold00024 364011 1 A T scaffold4026 Both SNP 0007.scaffold00024 364022 1 A C scaffold4026 ScafM SNP 0007.scaffold00024 364078 1 C T scaffold4026 ReadM INDEL 0007.scaffold00024 364125 1 . C - ReadM INDEL 0007.scaffold00024 364126 1 . A - Both SNP 0007.scaffold00024 364767 1 A G C19758453 Both SNP 0007.scaffold00024 364776 1 C T C19758453 ScafM SNP 0007.scaffold00024 364800 1 G A C19758453 ScafM SNP 0007.scaffold00024 364804 1 T A C19758453 ReadM SNP 0007.scaffold00024 364932 1 A G - ScafM INDEL 0007.scaffold00024 365082 3 ACT ... C19758453 ScafM SNP 0007.scaffold00024 365099 1 G T C19758453 ScafM SNP 0007.scaffold00024 365226 1 A C C19758453 ScafM SNP 0007.scaffold00024 365234 1 A G C19758453 ScafM INDEL 0007.scaffold00024 365422 1 . C C19758453 ScafM SNP 0007.scaffold00024 365691 1 C T C19758453 ScafM INDEL 0007.scaffold00024 365805 2 GA .. C19758453 ScafM SNP 0007.scaffold00024 366604 1 T G scaffold4026 ScafM SNP 0007.scaffold00024 366607 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 366610 1 T G scaffold4026 ScafM SNP 0007.scaffold00024 366662 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 366698 1 G A scaffold4026 ScafM SNP 0007.scaffold00024 366727 1 C A scaffold4026 ScafM SNP 0007.scaffold00024 366731 1 G C scaffold4026 ScafM SNP 0007.scaffold00024 366735 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 366743 1 T G scaffold4026 ScafM INDEL 0007.scaffold00024 366748 1 C . scaffold4026 ScafM SNP 0007.scaffold00024 366763 3 AAG CGA scaffold4026 ScafM INDEL 0007.scaffold00024 366773 1 . T scaffold4026 ScafM INDEL 0007.scaffold00024 366786 1 . A scaffold4026 ScafM SNP 0007.scaffold00024 366789 1 G T scaffold4026 ReadM SNP 0007.scaffold00024 366892 1 G A - ScafM SNP 0007.scaffold00024 366912 1 G C scaffold4026 ScafM SNP 0007.scaffold00024 366917 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 366928 2 TA CG scaffold4026 ScafM SNP 0007.scaffold00024 366947 1 T A scaffold4026 ScafM SNP 0007.scaffold00024 366956 2 TC CA scaffold4026 ScafM SNP 0007.scaffold00024 366967 1 T C scaffold4026 Both SNP 0007.scaffold00024 367167 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 367197 1 C T scaffold4026 Both SNP 0007.scaffold00024 367272 1 T C scaffold4026 ScafM SNP 0007.scaffold00024 367288 1 G C scaffold4026 ScafM SNP 0007.scaffold00024 367353 1 A T scaffold4026 Both SNP 0007.scaffold00024 367483 1 C T scaffold4026 ScafM SNP 0007.scaffold00024 367485 1 A C scaffold4026 ScafM SNP 0007.scaffold00024 367843 1 T G scaffold4026 ScafM SNP 0007.scaffold00024 367849 1 G C scaffold4026 ScafM INDEL 0007.scaffold00024 367851 1 . C scaffold4026 ScafM INDEL 0007.scaffold00024 367856 1 A . scaffold4026 ScafM SNP 0007.scaffold00024 367861 2 AG TT scaffold4026 ScafM INDEL 0007.scaffold00024 367867 2 GT .. scaffold4026 ScafM SNP 0007.scaffold00024 367883 1 G C scaffold4026 ScafM INDEL 0007.scaffold00024 367893 1 A . scaffold4026 ScafM SNP 0007.scaffold00024 367910 2 CG GT scaffold4026 ScafM SNP 0007.scaffold00024 367919 1 T G scaffold4026 ReadM SNP 0007.scaffold00024 369680 1 A G - ReadM SNP 0007.scaffold00024 369991 1 A G - ScafM SNP 0007.scaffold00024 371286 1 T G scaffold16392 ScafM SNP 0007.scaffold00024 371351 1 G A scaffold16392 ScafM SNP 0007.scaffold00024 371368 1 C T scaffold16392 ScafM SNP 0007.scaffold00024 371375 1 C T scaffold16392 ScafM SNP 0007.scaffold00024 371408 1 A C scaffold16392 ScafM INDEL 0007.scaffold00024 371421 1 . A scaffold16392 ScafM SNP 0007.scaffold00024 371444 1 T A scaffold16392 ScafM INDEL 0007.scaffold00024 371463 1 G . scaffold16392 ScafM SNP 0007.scaffold00024 371489 1 G A scaffold16392 ScafM SNP 0007.scaffold00024 373746 1 A T scaffold4026 ScafM SNP 0007.scaffold00024 373780 1 A G scaffold4026 ReadM SNP 0007.scaffold00024 373917 1 A G - ScafM SNP 0007.scaffold00024 374308 1 C A scaffold38218 ScafM SNP 0007.scaffold00024 374336 1 G A scaffold38218 ScafM SNP 0007.scaffold00024 377389 1 T C scaffold16392 ScafM SNP 0007.scaffold00024 377401 2 CA TG scaffold16392 ScafM SNP 0007.scaffold00024 377460 1 T C scaffold16392 ScafM SNP 0007.scaffold00024 377474 1 T C scaffold16392 ScafM SNP 0007.scaffold00024 377483 1 C T scaffold16392 ScafM SNP 0007.scaffold00024 377503 1 A G scaffold16392 ScafM SNP 0007.scaffold00024 377579 1 C T scaffold16392 ScafM SNP 0007.scaffold00024 377586 1 G A scaffold16392 ScafM SNP 0007.scaffold00024 377601 1 T C scaffold16392 ReadM SNP 0007.scaffold00024 377903 1 A G - ReadM SNP 0007.scaffold00024 377927 1 G A - ReadM SNP 0007.scaffold00024 377955 1 A G - ReadM SNP 0007.scaffold00024 378035 1 G A - ReadM SNP 0007.scaffold00024 378076 1 T G - ReadM SNP 0007.scaffold00024 378502 1 A C - ReadM SNP 0007.scaffold00024 379002 1 A T - ReadM SNP 0007.scaffold00024 379085 1 G C - ScafM SNP 0007.scaffold00024 379219 2 GC AT scaffold38218 ScafM INDEL 0007.scaffold00024 379237 3 TTC ... scaffold38218 ScafM INDEL 0007.scaffold00024 381892 4 .... TGCA scaffold48393 ScafM SNP 0007.scaffold00024 381897 1 C T scaffold48393 ScafM SNP 0007.scaffold00024 382040 1 T A scaffold18171 ScafM INDEL 0007.scaffold00024 382081 1 . T scaffold18171 ScafM SNP 0007.scaffold00024 382092 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 382127 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 382160 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 382204 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 382249 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 382252 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 382258 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 382299 1 T G scaffold18171 ReadM SNP 0007.scaffold00024 382710 1 T C - ReadM INDEL 0007.scaffold00024 382773 1 . G - ReadM SNP 0007.scaffold00024 383032 1 G T - Both SNP 0007.scaffold00024 383064 1 C T scaffold18171 Both SNP 0007.scaffold00024 383125 1 A G scaffold18171 Both SNP 0007.scaffold00024 383191 1 G A scaffold18171 Both SNP 0007.scaffold00024 383255 1 C G scaffold18171 Both SNP 0007.scaffold00024 383312 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 383330 1 C G scaffold18171 ScafM SNP 0007.scaffold00024 383354 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 383356 1 A G scaffold18171 Both INDEL 0007.scaffold00024 383377 1 . A scaffold18171 Both SNP 0007.scaffold00024 383390 1 T C scaffold18171 Both SNP 0007.scaffold00024 383404 1 C T scaffold18171 Both INDEL 0007.scaffold00024 383543 2 TG .. scaffold18171 Both SNP 0007.scaffold00024 383579 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 383744 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 383781 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 383858 1 A C scaffold18171 Both INDEL 0007.scaffold00024 383867 1 A . scaffold18171 ScafM SNP 0007.scaffold00024 383920 1 C A scaffold18171 ScafM SNP 0007.scaffold00024 383954 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 384032 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 384051 1 T G scaffold18171 ScafM SNP 0007.scaffold00024 384201 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 384249 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 384269 1 A C scaffold18171 ScafM INDEL 0007.scaffold00024 384301 1 T . scaffold18171 ScafM SNP 0007.scaffold00024 384316 1 A C scaffold18171 ScafM SNP 0007.scaffold00024 384331 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 384336 1 G A scaffold18171 ScafM INDEL 0007.scaffold00024 385627 2 .A GT scaffold18171 ScafM SNP 0007.scaffold00024 385635 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 385654 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 385660 1 G A scaffold18171 ScafM SNP 0007.scaffold00024 385711 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 385726 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 385731 1 A T scaffold18171 ScafM SNP 0007.scaffold00024 385741 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 385759 1 G C scaffold18171 ScafM SNP 0007.scaffold00024 385768 1 T G scaffold18171 ScafM SNP 0007.scaffold00024 385770 1 G C scaffold18171 ScafM SNP 0007.scaffold00024 385784 1 G A scaffold18171 ScafM SNP 0007.scaffold00024 385790 1 A T scaffold18171 ScafM SNP 0007.scaffold00024 385813 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 385825 1 A C scaffold18171 ScafM INDEL 0007.scaffold00024 385849 8 TATTTATG ........ scaffold18171 ScafM INDEL 0007.scaffold00024 385870 1 . A scaffold18171 ScafM SNP 0007.scaffold00024 385926 1 G T scaffold18171 ScafM SNP 0007.scaffold00024 385935 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 385937 1 T C scaffold18171 ScafM SNP 0007.scaffold00024 385956 1 G C scaffold18171 ScafM SNP 0007.scaffold00024 385963 1 C A scaffold18171 ScafM SNP 0007.scaffold00024 385967 1 G A scaffold18171 ScafM SNP 0007.scaffold00024 385974 1 C T scaffold18171 ScafM SNP 0007.scaffold00024 385983 1 C G scaffold18171 ScafM SNP 0007.scaffold00024 385994 1 A C scaffold18171 ScafM SNP 0007.scaffold00024 386068 1 A T scaffold18171 ScafM SNP 0007.scaffold00024 386079 1 T C scaffold18171 Both SNP 0007.scaffold00024 386268 1 C T scaffold18171 ReadM SNP 0007.scaffold00024 386493 1 G A - ReadM SNP 0007.scaffold00024 386530 1 C T - ReadM SNP 0007.scaffold00024 386582 1 A C - ReadM SNP 0007.scaffold00024 386610 1 G A - ReadM SNP 0007.scaffold00024 386687 1 T C - ReadM SNP 0007.scaffold00024 388202 1 A G - ScafM INDEL 0007.scaffold00024 388300 2 CC .. scaffold47137 ScafM SNP 0007.scaffold00024 388361 1 A C scaffold47137 ScafM SNP 0007.scaffold00024 388430 1 G T scaffold47137 ScafM INDEL 0007.scaffold00024 388448 4 AAAA ..TT scaffold47137 ScafM SNP 0007.scaffold00024 388574 1 A T scaffold47137 ScafM SNP 0007.scaffold00024 388680 1 G C scaffold47137 Both SNP 0007.scaffold00024 388721 1 T C scaffold47137 ScafM SNP 0007.scaffold00024 388874 1 C T scaffold47137 ScafM SNP 0007.scaffold00024 388910 1 T A scaffold47137 ScafM SNP 0007.scaffold00024 388930 1 A G scaffold47137 Both SNP 0007.scaffold00024 389148 1 A G scaffold18171 Both SNP 0007.scaffold00024 389296 1 A C scaffold18171 ReadM SNP 0007.scaffold00024 389508 1 C G - ReadM SNP 0007.scaffold00024 389516 1 T C - ReadM SNP 0007.scaffold00024 389672 1 G A - ReadM SNP 0007.scaffold00024 389690 1 C T - ScafM SNP 0007.scaffold00024 390017 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 390137 1 G T scaffold18171 ScafM SNP 0007.scaffold00024 391133 1 G C scaffold1725 ScafM SNP 0007.scaffold00024 391557 1 G A scaffold18171 ScafM SNP 0007.scaffold00024 391582 1 G C scaffold18171 ScafM SNP 0007.scaffold00024 391654 1 A C scaffold18171 ScafM SNP 0007.scaffold00024 391685 1 C A scaffold18171 ScafM SNP 0007.scaffold00024 391700 1 A G scaffold18171 ScafM INDEL 0007.scaffold00024 391711 6 ...... TAGTTT scaffold18171 ScafM SNP 0007.scaffold00024 391715 2 AG TT scaffold18171 ScafM SNP 0007.scaffold00024 391877 1 A G scaffold18171 ScafM SNP 0007.scaffold00024 391937 1 T A scaffold18171 ScafM SNP 0007.scaffold00024 391963 1 T C scaffold18171 ScafM INDEL 0007.scaffold00024 392089 1 . T scaffold18171 ReadM SNP 0007.scaffold00024 392374 1 T C - ReadM SNP 0007.scaffold00024 392408 1 T C - ReadM SNP 0007.scaffold00024 392491 1 A T - ReadM SNP 0007.scaffold00024 392639 1 C G - ReadM SNP 0007.scaffold00024 393588 1 G T - ReadM SNP 0007.scaffold00024 393707 1 T C - ReadM SNP 0007.scaffold00024 393711 1 C A - ReadM SNP 0007.scaffold00024 393826 1 C T - ReadM SNP 0007.scaffold00024 393965 1 T C - ReadM SNP 0007.scaffold00024 395104 1 A G - ReadM SNP 0007.scaffold00024 395128 1 G C - ReadM INDEL 0007.scaffold00024 395248 2 .. AC - Both SNP 0007.scaffold00024 395282 1 T G C19723309 ReadM SNP 0007.scaffold00024 395370 1 T A - ReadM SNP 0007.scaffold00024 395457 1 T C - ReadM SNP 0007.scaffold00024 395474 1 A T - ReadM SNP 0007.scaffold00024 395529 1 T C - ReadM SNP 0007.scaffold00024 395603 1 A G - ReadM SNP 0007.scaffold00024 395648 1 T A - ReadM SNP 0007.scaffold00024 395820 1 A G - ReadM INDEL 0007.scaffold00024 395878 2 .. AA - ReadM SNP 0007.scaffold00024 395968 1 G C - ReadM SNP 0007.scaffold00024 395979 1 T A - ReadM SNP 0007.scaffold00024 395999 1 A C - ReadM SNP 0007.scaffold00024 396108 1 T C - ReadM SNP 0007.scaffold00024 396200 1 A G - ReadM SNP 0007.scaffold00024 396269 1 C T - ReadM SNP 0007.scaffold00024 396326 1 T C - ReadM SNP 0007.scaffold00024 396353 1 T G - ReadM SNP 0007.scaffold00024 396649 1 G T - ReadM SNP 0007.scaffold00024 396872 1 T C - ReadM SNP 0007.scaffold00024 397062 1 T C - ReadM SNP 0007.scaffold00024 397513 1 T C - Both INDEL 0007.scaffold00024 397765 1 . G scaffold46375 Both SNP 0007.scaffold00024 397960 1 A G scaffold46375 ReadM SNP 0007.scaffold00024 398035 1 G A - ScafM SNP 0007.scaffold00024 398172 1 C T scaffold46375 ScafM INDEL 0007.scaffold00024 398176 7 ....... GGTGAGG scaffold46375 ScafM SNP 0007.scaffold00024 398224 1 A G scaffold46375 ScafM SNP 0007.scaffold00024 398236 1 G A scaffold46375 ScafM SNP 0007.scaffold00024 398252 1 A T scaffold46375 ReadM SNP 0007.scaffold00024 399793 1 C A - ReadM SNP 0007.scaffold00024 399804 1 T G - ReadM SNP 0007.scaffold00024 400048 1 C G - ScafM SNP 0007.scaffold00024 400074 1 A T scaffold5128 ReadM SNP 0007.scaffold00024 400081 1 T A - ScafM SNP 0007.scaffold00024 400081 1 T G scaffold5128 ScafM SNP 0007.scaffold00024 400087 1 A G scaffold5128 ScafM INDEL 0007.scaffold00024 400099 2 AA .. scaffold5128 ScafM INDEL 0007.scaffold00024 400102 1 T . scaffold5128 ScafM SNP 0007.scaffold00024 400140 1 A G scaffold5128 ReadM SNP 0007.scaffold00024 400620 1 A G - ReadM SNP 0007.scaffold00024 400846 1 T G - ReadM SNP 0007.scaffold00024 400954 1 C T - ReadM SNP 0007.scaffold00024 401838 1 T C - ReadM SNP 0007.scaffold00024 402089 1 A G - ReadM SNP 0007.scaffold00024 402211 1 G C - ReadM SNP 0007.scaffold00024 402373 1 C T - ReadM SNP 0007.scaffold00024 402778 1 C T - ReadM SNP 0007.scaffold00024 402804 1 T C - ReadM INDEL 0007.scaffold00024 404121 1 . T - ReadM SNP 0007.scaffold00024 404389 1 G A - ReadM SNP 0007.scaffold00024 404499 1 C T - ReadM SNP 0007.scaffold00024 404675 1 C A - ReadM SNP 0007.scaffold00024 404872 1 C T - ReadM SNP 0007.scaffold00024 404968 1 C T - ReadM SNP 0007.scaffold00024 404979 1 A T - ScafM INDEL 0007.scaffold00024 405124 10 TTAACTATTT .......... scaffold14789 ReadM INDEL 0007.scaffold00024 405138 1 A . - ScafM SNP 0007.scaffold00024 405145 1 A T scaffold14789 ScafM SNP 0007.scaffold00024 405193 1 G T scaffold14789 Both SNP 0007.scaffold00024 405301 1 G C scaffold14789 ScafM SNP 0007.scaffold00024 405400 1 C A scaffold14789 ScafM INDEL 0007.scaffold00024 405460 3 GAT ... scaffold14789 ScafM INDEL 0007.scaffold00024 405464 1 G . scaffold14789 ScafM INDEL 0007.scaffold00024 405516 7 ....... AGTCCCG scaffold14789 ScafM SNP 0007.scaffold00024 405560 1 C T scaffold14789 ReadM SNP 0007.scaffold00024 405624 1 A T - ReadM SNP 0007.scaffold00024 405895 1 T C - ReadM SNP 0007.scaffold00024 405927 1 A G - ScafM INDEL 0007.scaffold00024 406079 1 . A scaffold14788 ScafM SNP 0007.scaffold00024 406082 1 A G scaffold14788 ScafM SNP 0007.scaffold00024 406098 1 A T scaffold14788 ScafM INDEL 0007.scaffold00024 406103 2 AA .G scaffold14788 ScafM INDEL 0007.scaffold00024 406115 1 . C scaffold14788 Both SNP 0007.scaffold00024 406130 1 A T scaffold14788 ReadM SNP 0007.scaffold00024 406503 1 A G - ScafM SNP 0007.scaffold00024 406808 1 T C scaffold14788 Both SNP 0007.scaffold00024 406817 1 A G scaffold14788 Both SNP 0007.scaffold00024 406877 1 T G scaffold14788 Both SNP 0007.scaffold00024 406901 1 C T scaffold14788 ScafM SNP 0007.scaffold00024 406906 1 G T scaffold14788 ScafM SNP 0007.scaffold00024 406908 1 G C scaffold14788 ReadM SNP 0007.scaffold00024 407006 1 T C - ReadM SNP 0007.scaffold00024 407012 1 G A - ReadM SNP 0007.scaffold00024 407129 1 T C - Both SNP 0007.scaffold00024 407308 1 T C scaffold14788 ScafM SNP 0007.scaffold00024 407333 1 T C scaffold14788 ReadM SNP 0007.scaffold00024 407402 1 C A - ReadM SNP 0007.scaffold00024 407507 1 G A - ScafM INDEL 0007.scaffold00024 408022 1 T . scaffold14788 ScafM SNP 0007.scaffold00024 408530 1 G T scaffold29042 ScafM SNP 0007.scaffold00024 408574 1 A G scaffold29042 ScafM SNP 0007.scaffold00024 408650 1 T G scaffold29042 ScafM SNP 0007.scaffold00024 408653 1 C T scaffold29042 ScafM SNP 0007.scaffold00024 408698 1 G T scaffold29042 ScafM INDEL 0007.scaffold00024 408702 3 AAG ... scaffold29042 Both SNP 0007.scaffold00024 408883 1 A C scaffold29042 Both SNP 0007.scaffold00024 408914 1 C T scaffold29042 Both SNP 0007.scaffold00024 408972 1 T C scaffold29042 ScafM SNP 0007.scaffold00024 409079 1 T C scaffold29042 Both SNP 0007.scaffold00024 409154 1 A G scaffold29042 Both SNP 0007.scaffold00024 409290 1 C G scaffold29042 ScafM SNP 0007.scaffold00024 409362 1 A C scaffold29042 ScafM INDEL 0007.scaffold00024 409367 1 . A scaffold29042 Both SNP 0007.scaffold00024 409393 1 G C scaffold29042 Both INDEL 0007.scaffold00024 409398 1 T . scaffold29042 ScafM SNP 0007.scaffold00024 409440 1 T G scaffold29042 ScafM SNP 0007.scaffold00024 409444 1 T C scaffold29042 ReadM SNP 0007.scaffold00024 409729 1 G A - ReadM SNP 0007.scaffold00024 409775 1 C A - ReadM SNP 0007.scaffold00024 409925 1 G C - ReadM SNP 0007.scaffold00024 409949 1 A G - ReadM SNP 0007.scaffold00024 410018 1 C A - ReadM SNP 0007.scaffold00024 410153 1 A G - ReadM SNP 0007.scaffold00024 410187 1 T G - ReadM SNP 0007.scaffold00024 410297 1 C G - ReadM SNP 0007.scaffold00024 410333 1 A C - ReadM SNP 0007.scaffold00024 410406 1 A G - ReadM SNP 0007.scaffold00024 410445 1 G A - ReadM SNP 0007.scaffold00024 410461 1 A G - ReadM SNP 0007.scaffold00024 410594 1 C T - ReadM SNP 0007.scaffold00024 410708 1 G A - ReadM SNP 0007.scaffold00024 410784 1 C A - ReadM SNP 0007.scaffold00024 410966 1 A G - ReadM SNP 0007.scaffold00024 411035 1 G A - ReadM SNP 0007.scaffold00024 411066 1 T C - ReadM SNP 0007.scaffold00024 411084 1 G A - Both SNP 0007.scaffold00024 411249 1 A G C19669755 Both SNP 0007.scaffold00024 411270 1 G T C19669755 Both SNP 0007.scaffold00024 411310 1 G A C19669755 Both SNP 0007.scaffold00024 411390 1 T A C19669755 Both SNP 0007.scaffold00024 411449 1 T G C19669755 ScafM SNP 0007.scaffold00024 411490 1 C G C19669755 Both SNP 0007.scaffold00024 411538 1 G A C19669755 Both SNP 0007.scaffold00024 411540 1 T A C19669755 ScafM SNP 0007.scaffold00024 411562 1 T G C19669755 Both SNP 0007.scaffold00024 411579 1 C T C19669755 Both SNP 0007.scaffold00024 411627 1 A C C19669755 ScafM SNP 0007.scaffold00024 411656 1 C T C19669755 Both SNP 0007.scaffold00024 411698 1 A T C19669755 ReadM SNP 0007.scaffold00024 411798 1 T G - ReadM SNP 0007.scaffold00024 411831 1 T A - ReadM SNP 0007.scaffold00024 411857 1 C T - ReadM SNP 0007.scaffold00024 411926 1 A C - ReadM SNP 0007.scaffold00024 411953 1 T C - ReadM SNP 0007.scaffold00024 411995 1 G A - ReadM INDEL 0007.scaffold00024 412013 1 T . - ReadM SNP 0007.scaffold00024 412108 2 AA TG - ReadM INDEL 0007.scaffold00024 412181 1 . T - ReadM SNP 0007.scaffold00024 412208 1 A G - ReadM SNP 0007.scaffold00024 412378 1 G A - ReadM SNP 0007.scaffold00024 412461 1 A G - ReadM SNP 0007.scaffold00024 412539 1 A C - ReadM SNP 0007.scaffold00024 412643 1 T G - ReadM SNP 0007.scaffold00024 412690 1 C T - ReadM SNP 0007.scaffold00024 412763 1 A G - ReadM SNP 0007.scaffold00024 412804 1 A G - ReadM SNP 0007.scaffold00024 412905 1 G A - ReadM SNP 0007.scaffold00024 412919 1 A C - ReadM SNP 0007.scaffold00024 412925 1 T A - ReadM SNP 0007.scaffold00024 412936 1 C A - ReadM SNP 0007.scaffold00024 413027 1 C T - ReadM SNP 0007.scaffold00024 413058 1 G C - ScafM SNP 0007.scaffold00024 413104 1 G A C19684105 ScafM SNP 0007.scaffold00024 413114 1 A T C19684105 ScafM SNP 0007.scaffold00024 413127 1 A T C19684105 ScafM SNP 0007.scaffold00024 413130 1 A G C19684105 ScafM SNP 0007.scaffold00024 413140 1 A G C19684105 ScafM SNP 0007.scaffold00024 413145 1 A G C19684105 ScafM SNP 0007.scaffold00024 413156 1 G T C19684105 ScafM SNP 0007.scaffold00024 413193 1 G A C19684105 ScafM SNP 0007.scaffold00024 413350 1 G A C19684105 ReadM INDEL 0007.scaffold00024 413396 1 . 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T - ReadM SNP 0007.scaffold00024 508717 1 G A - ReadM SNP 0007.scaffold00024 509717 1 G A - ReadM SNP 0007.scaffold00024 509737 1 T G - ReadM SNP 0007.scaffold00024 509761 1 C T - ReadM SNP 0007.scaffold00024 509796 1 C T - ReadM SNP 0007.scaffold00024 512469 1 T C - ReadM SNP 0007.scaffold00024 512472 1 T G - ReadM SNP 0007.scaffold00024 512511 1 T C - ReadM SNP 0007.scaffold00024 513041 1 T C - ReadM SNP 0007.scaffold00024 513816 1 T A - ReadM SNP 0007.scaffold00024 513820 1 T A - ReadM SNP 0007.scaffold00024 513858 1 G C - ReadM SNP 0007.scaffold00024 513909 1 G T - ReadM SNP 0007.scaffold00024 513936 1 A C - ReadM SNP 0007.scaffold00024 514301 1 G T - ReadM SNP 0007.scaffold00024 514409 1 G T - ReadM SNP 0007.scaffold00024 514439 1 C T - ReadM SNP 0007.scaffold00024 514481 1 G T - ReadM SNP 0007.scaffold00024 514628 1 A G - ReadM SNP 0007.scaffold00024 514678 1 G A - Both SNP 0007.scaffold00024 515094 1 T C C19722791 Both SNP 0007.scaffold00024 515106 1 A G C19722791 ScafM SNP 0007.scaffold00024 515111 1 A C C19722791 ScafM SNP 0007.scaffold00024 515129 1 T A C19722791 ScafM SNP 0007.scaffold00024 515137 1 C G C19722791 ScafM SNP 0007.scaffold00024 515154 1 G A C19722791 ScafM SNP 0007.scaffold00024 515174 1 G A C19722791 ScafM SNP 0007.scaffold00024 515182 1 G A C19722791 ScafM SNP 0007.scaffold00024 515221 1 T A C19722791 ScafM SNP 0007.scaffold00024 515239 1 G A C19722791 ScafM SNP 0007.scaffold00024 515244 1 C T C19722791 ScafM SNP 0007.scaffold00024 515281 1 G C C19722791 ScafM SNP 0007.scaffold00024 515306 1 T C C19722791 ScafM SNP 0007.scaffold00024 515328 1 G A C19722791 ScafM SNP 0007.scaffold00024 515391 1 C T C19722791 ScafM SNP 0007.scaffold00024 515393 1 G A C19722791 ReadM SNP 0007.scaffold00024 515458 1 G A - ReadM SNP 0007.scaffold00024 515555 1 A T - ReadM SNP 0007.scaffold00024 515580 1 G A - ReadM SNP 0007.scaffold00024 515625 1 T C - ReadM SNP 0007.scaffold00024 515709 1 T G - ReadM SNP 0007.scaffold00024 515810 1 T C - ReadM SNP 0007.scaffold00024 515825 1 A G - ReadM SNP 0007.scaffold00024 515838 1 G A - ReadM SNP 0007.scaffold00024 515934 1 A G - ReadM SNP 0007.scaffold00024 515946 1 T C - ScafM INDEL 0007.scaffold00024 516027 3 ... TAG scaffold70113 ScafM INDEL 0007.scaffold00024 516028 1 . T scaffold70113 ScafM INDEL 0007.scaffold00024 516029 1 . T scaffold70113 ScafM INDEL 0007.scaffold00024 516030 1 . G scaffold70113 ScafM SNP 0007.scaffold00024 516037 1 G A scaffold70113 ScafM SNP 0007.scaffold00024 516039 1 T C scaffold70113 ScafM SNP 0007.scaffold00024 516051 2 CT GC scaffold70113 ScafM SNP 0007.scaffold00024 516151 1 G A scaffold70113 Both SNP 0007.scaffold00024 516163 1 A T scaffold70113 ScafM SNP 0007.scaffold00024 516175 1 G T scaffold70113 ScafM SNP 0007.scaffold00024 516189 1 A G scaffold70113 ScafM SNP 0007.scaffold00024 516195 1 T C scaffold70113 ScafM SNP 0007.scaffold00024 516205 1 T A scaffold70113 ScafM SNP 0007.scaffold00024 516223 1 A T scaffold70113 ScafM SNP 0007.scaffold00024 516255 1 G A scaffold70113 ScafM INDEL 0007.scaffold00024 516276 1 T . scaffold70113 ScafM SNP 0007.scaffold00024 516298 1 A T scaffold70113 ScafM SNP 0007.scaffold00024 516304 1 A T scaffold70113 ScafM SNP 0007.scaffold00024 516309 1 A G scaffold70113 ScafM SNP 0007.scaffold00024 516328 1 T C scaffold70113 Both SNP 0007.scaffold00024 516373 1 T C scaffold70113 Both SNP 0007.scaffold00024 516382 1 C T scaffold70113 ScafM SNP 0007.scaffold00024 516458 1 C G scaffold70113 ScafM SNP 0007.scaffold00024 516479 3 GGT ATA scaffold70113 ScafM SNP 0007.scaffold00024 516496 1 T A scaffold70113 ReadM SNP 0007.scaffold00024 516704 1 T C - ReadM SNP 0007.scaffold00024 516725 1 C G - ReadM SNP 0007.scaffold00024 516807 1 T C - ReadM SNP 0007.scaffold00024 516813 1 C A - ReadM SNP 0007.scaffold00024 519335 1 G A - ReadM SNP 0007.scaffold00024 519457 1 C T - ReadM SNP 0007.scaffold00024 519544 1 G A - ReadM SNP 0007.scaffold00024 520458 1 C T - Both SNP 0007.scaffold00024 520960 1 T C scaffold11878 ScafM SNP 0007.scaffold00024 521004 1 A C scaffold11878 ScafM SNP 0007.scaffold00024 521073 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 521142 1 G C scaffold11878 ScafM SNP 0007.scaffold00024 521223 1 G C scaffold11878 Both SNP 0007.scaffold00024 521316 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 521362 1 T A scaffold11878 ScafM SNP 0007.scaffold00024 521499 1 C G scaffold11878 Both SNP 0007.scaffold00024 521528 1 A G scaffold11878 Both SNP 0007.scaffold00024 521797 1 T C scaffold11878 Both SNP 0007.scaffold00024 521854 1 T C scaffold11878 ScafM SNP 0007.scaffold00024 522078 1 T C scaffold11878 ScafM INDEL 0007.scaffold00024 522130 20 TATCTCTTCCTCATCGGATT .................... scaffold11878 ReadM INDEL 0007.scaffold00024 522138 1 C . - Both SNP 0007.scaffold00024 522208 1 A C scaffold11878 Both SNP 0007.scaffold00024 522248 1 T G scaffold11878 Both SNP 0007.scaffold00024 522316 1 T C scaffold11878 Both SNP 0007.scaffold00024 522441 1 A T scaffold11878 Both SNP 0007.scaffold00024 522466 1 T A scaffold11878 ScafM SNP 0007.scaffold00024 522495 1 G A scaffold11878 Both SNP 0007.scaffold00024 522521 1 C T scaffold11878 ReadM SNP 0007.scaffold00024 522832 1 A G - ReadM SNP 0007.scaffold00024 522875 1 C T - ScafM SNP 0007.scaffold00024 523331 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 523347 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 524525 1 G A scaffold11878 Both INDEL 0007.scaffold00024 524722 3 AGC ... scaffold11878 Both SNP 0007.scaffold00024 524824 1 A G scaffold11878 Both SNP 0007.scaffold00024 524896 1 T C scaffold11878 Both SNP 0007.scaffold00024 524925 1 G T scaffold11878 Both SNP 0007.scaffold00024 524938 1 T C scaffold11878 Both SNP 0007.scaffold00024 524964 1 C T scaffold11878 ReadM SNP 0007.scaffold00024 525036 1 C T - ReadM SNP 0007.scaffold00024 525046 1 C G - ReadM SNP 0007.scaffold00024 525059 1 G C - ReadM SNP 0007.scaffold00024 525202 1 T C - ReadM SNP 0007.scaffold00024 525267 1 G A - ReadM SNP 0007.scaffold00024 525435 1 T C - ReadM SNP 0007.scaffold00024 525547 1 G A - ReadM SNP 0007.scaffold00024 525556 1 C T - ReadM SNP 0007.scaffold00024 525574 1 A G - ReadM SNP 0007.scaffold00024 525724 1 A C - ReadM SNP 0007.scaffold00024 525758 1 A G - ReadM SNP 0007.scaffold00024 525791 1 C T - ReadM SNP 0007.scaffold00024 525796 1 C G - ReadM SNP 0007.scaffold00024 525935 1 G C - ReadM SNP 0007.scaffold00024 526075 1 G T - ReadM SNP 0007.scaffold00024 526112 1 C T - ReadM SNP 0007.scaffold00024 526477 1 C G - ReadM SNP 0007.scaffold00024 526524 1 T A - ReadM SNP 0007.scaffold00024 526556 1 C T - ReadM SNP 0007.scaffold00024 526596 1 A G - ReadM SNP 0007.scaffold00024 526703 1 A G - ReadM SNP 0007.scaffold00024 526768 1 G C - ReadM INDEL 0007.scaffold00024 526782 1 . A - ReadM SNP 0007.scaffold00024 526813 1 T G - ReadM SNP 0007.scaffold00024 526846 1 T C - ReadM SNP 0007.scaffold00024 526881 1 G C - ReadM SNP 0007.scaffold00024 526905 1 G C - ReadM SNP 0007.scaffold00024 526989 1 G T - ReadM INDEL 0007.scaffold00024 527047 1 A . - ReadM SNP 0007.scaffold00024 527150 1 C T - ReadM SNP 0007.scaffold00024 527316 1 G A - ReadM SNP 0007.scaffold00024 527365 1 T C - Both SNP 0007.scaffold00024 527414 1 C T scaffold11878 Both SNP 0007.scaffold00024 527428 1 C A scaffold11878 Both INDEL 0007.scaffold00024 527472 1 . A scaffold11878 Both SNP 0007.scaffold00024 527531 1 T A scaffold11878 Both SNP 0007.scaffold00024 527573 1 G A scaffold11878 Both SNP 0007.scaffold00024 527587 1 T C scaffold11878 Both SNP 0007.scaffold00024 527684 1 A G scaffold11878 Both SNP 0007.scaffold00024 527786 1 A T scaffold11878 Both SNP 0007.scaffold00024 527839 1 C A scaffold11878 ReadM SNP 0007.scaffold00024 527984 1 T C - ReadM SNP 0007.scaffold00024 528018 1 A T - ReadM SNP 0007.scaffold00024 528386 1 C T - ReadM SNP 0007.scaffold00024 528551 1 T C - ReadM SNP 0007.scaffold00024 528636 1 A C - ReadM SNP 0007.scaffold00024 528688 1 T A - ReadM SNP 0007.scaffold00024 528733 1 G T - ReadM INDEL 0007.scaffold00024 528871 1 C . - ReadM SNP 0007.scaffold00024 528936 1 T C - ReadM SNP 0007.scaffold00024 528953 1 G A - ReadM SNP 0007.scaffold00024 529025 1 T C - ReadM SNP 0007.scaffold00024 529162 1 G A - ReadM SNP 0007.scaffold00024 529177 1 C T - ReadM SNP 0007.scaffold00024 529219 1 A G - ReadM SNP 0007.scaffold00024 529344 1 C G - ReadM SNP 0007.scaffold00024 529361 1 C T - ReadM SNP 0007.scaffold00024 529520 1 T C - Both SNP 0007.scaffold00024 529614 1 A G scaffold11878 Both SNP 0007.scaffold00024 529639 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 529770 1 T C scaffold11878 ScafM SNP 0007.scaffold00024 529854 1 C A scaffold11878 ScafM SNP 0007.scaffold00024 529860 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 529885 1 G C scaffold11878 ScafM SNP 0007.scaffold00024 529912 1 A T scaffold11878 ScafM SNP 0007.scaffold00024 529917 1 A T scaffold11878 ScafM SNP 0007.scaffold00024 530105 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 530122 1 A T scaffold11878 ScafM SNP 0007.scaffold00024 530140 1 A G scaffold11878 ScafM SNP 0007.scaffold00024 530178 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 530184 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 530188 1 C G scaffold11878 ScafM SNP 0007.scaffold00024 530705 1 A G scaffold11878 ScafM SNP 0007.scaffold00024 530715 1 T C scaffold11878 ScafM INDEL 0007.scaffold00024 531005 1 . T scaffold11878 ScafM SNP 0007.scaffold00024 531010 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 531064 1 A C scaffold11878 ScafM SNP 0007.scaffold00024 531070 1 C T scaffold11878 ScafM INDEL 0007.scaffold00024 531086 3 ... TAT scaffold11878 ScafM SNP 0007.scaffold00024 531102 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 531116 1 G A scaffold11878 ReadM SNP 0007.scaffold00024 531289 1 A G - Both SNP 0007.scaffold00024 531457 1 T C scaffold11878 ScafM SNP 0007.scaffold00024 531614 1 G A scaffold55209 ScafM SNP 0007.scaffold00024 531618 1 T G scaffold55209 ScafM SNP 0007.scaffold00024 531685 1 T A scaffold55209 ScafM INDEL 0007.scaffold00024 531754 1 . T scaffold55209 ScafM SNP 0007.scaffold00024 537954 1 G A scaffold11878 ScafM SNP 0007.scaffold00024 537965 1 A T scaffold11878 ScafM INDEL 0007.scaffold00024 537978 22 CTTTTTCTGATGGAGGTTTTCA ...................... scaffold11878 ScafM SNP 0007.scaffold00024 538034 1 A G scaffold11878 ScafM SNP 0007.scaffold00024 538057 1 C T scaffold11878 ScafM SNP 0007.scaffold00024 538061 1 C G scaffold11878 ScafM SNP 0007.scaffold00024 538076 1 C A scaffold11878 ReadM SNP 0007.scaffold00024 538375 1 T C - ReadM SNP 0007.scaffold00024 538585 1 C T - ReadM SNP 0007.scaffold00024 538693 1 A C - ReadM SNP 0007.scaffold00024 538704 1 C T - ReadM SNP 0007.scaffold00024 538714 1 G A - ReadM SNP 0007.scaffold00024 538747 1 A G - ReadM INDEL 0007.scaffold00024 538749 1 A . - ReadM SNP 0007.scaffold00024 538775 1 C T - ReadM SNP 0007.scaffold00024 538849 1 C T - ReadM SNP 0007.scaffold00024 538855 1 T G - ReadM SNP 0007.scaffold00024 538946 1 T G - ReadM SNP 0007.scaffold00024 539010 1 A T - ReadM SNP 0007.scaffold00024 539021 1 G A - ReadM SNP 0007.scaffold00024 539109 1 G A - ReadM SNP 0007.scaffold00024 539205 1 T C - ReadM SNP 0007.scaffold00024 539434 1 A C - ReadM SNP 0007.scaffold00024 539479 1 T C - ReadM INDEL 0007.scaffold00024 539546 1 . A - ReadM SNP 0007.scaffold00024 539574 1 A G - ReadM SNP 0007.scaffold00024 539700 1 T G - ReadM SNP 0007.scaffold00024 539731 1 C G - ReadM SNP 0007.scaffold00024 539887 1 T G - ReadM INDEL 0007.scaffold00024 539920 1 T . - ReadM SNP 0007.scaffold00024 540149 1 G A - ReadM SNP 0007.scaffold00024 541363 1 T C - ReadM SNP 0007.scaffold00024 541737 1 T C - Both SNP 0007.scaffold00024 541847 1 C A scaffold54571 ScafM SNP 0007.scaffold00024 541851 1 G A scaffold54571 Both SNP 0007.scaffold00024 541861 1 G T scaffold54571 ReadM SNP 0007.scaffold00024 541923 1 A C - ReadM SNP 0007.scaffold00024 541992 1 C T - ReadM SNP 0007.scaffold00024 542154 1 C G - ReadM SNP 0007.scaffold00024 543062 1 G A - ReadM SNP 0007.scaffold00024 543624 1 A T - ScafM SNP 0007.scaffold00024 543647 1 G A scaffold54571 ScafM SNP 0007.scaffold00024 543658 1 T G scaffold54571 ReadM SNP 0007.scaffold00024 544180 1 A G - ScafM SNP 0007.scaffold00024 545259 1 A G scaffold6913 ScafM SNP 0007.scaffold00024 545270 1 A G scaffold6913 ScafM SNP 0007.scaffold00024 545290 1 C T scaffold6913 ScafM INDEL 0007.scaffold00024 545339 2 GG .. scaffold6913 ScafM INDEL 0007.scaffold00024 545345 4 TGCT .... scaffold6913 ScafM INDEL 0007.scaffold00024 545355 12 GCAGAGGTTGCT ............ scaffold6913 ScafM SNP 0007.scaffold00024 545384 1 G A scaffold6913 ScafM SNP 0007.scaffold00024 545399 1 G A scaffold6913 ScafM SNP 0007.scaffold00024 545410 1 G A scaffold6913 ScafM SNP 0007.scaffold00024 545412 2 CC TT scaffold6913 ScafM INDEL 0007.scaffold00024 545421 13 ............. GCGGTCGTTGCTG scaffold6913 ScafM SNP 0007.scaffold00024 545444 1 T G scaffold6913 ScafM INDEL 0007.scaffold00024 545478 1 C . scaffold6913 ScafM SNP 0007.scaffold00024 545483 1 G T scaffold6913 ReadM SNP 0007.scaffold00024 545799 1 T G - ReadM SNP 0007.scaffold00024 545899 1 G A - ReadM SNP 0007.scaffold00024 554122 1 C G - ReadM SNP 0007.scaffold00024 554532 1 A G - ReadM SNP 0007.scaffold00024 554732 1 C A - ReadM SNP 0007.scaffold00024 554887 1 G T - ReadM SNP 0007.scaffold00024 554896 1 A G - ScafM SNP 0007.scaffold00024 554965 1 G A scaffold50696 Both SNP 0007.scaffold00024 554982 1 C A scaffold50696 Both SNP 0007.scaffold00024 555022 1 A G scaffold50696 ScafM INDEL 0007.scaffold00024 555034 18 .................. AATTTGTTCTTTTTTTTT scaffold50696 Both INDEL 0007.scaffold00024 555059 1 T . scaffold50696 Both SNP 0007.scaffold00024 555071 1 T C scaffold50696 ScafM SNP 0007.scaffold00024 555123 1 C T scaffold50696 ScafM SNP 0007.scaffold00024 555145 1 A G scaffold50696 Both INDEL 0007.scaffold00024 555161 1 . T scaffold50696 ScafM SNP 0007.scaffold00024 555172 1 G A scaffold50696 ScafM SNP 0007.scaffold00024 555279 1 A G scaffold50696 Both SNP 0007.scaffold00024 555293 1 A C scaffold50696 Both SNP 0007.scaffold00024 555313 1 T C scaffold50696 Both SNP 0007.scaffold00024 555383 1 A G scaffold50696 ScafM SNP 0007.scaffold00024 555412 1 T C scaffold50696 Both SNP 0007.scaffold00024 555418 1 A G scaffold50696 Both SNP 0007.scaffold00024 555465 1 A G scaffold50696 ScafM INDEL 0007.scaffold00024 555510 2 CA .G scaffold50696 ScafM INDEL 0007.scaffold00024 555523 1 A . scaffold50696 ScafM SNP 0007.scaffold00024 555529 1 A C scaffold50696 Both SNP 0007.scaffold00024 555632 1 G A scaffold50696 ScafM SNP 0007.scaffold00024 555792 1 T G scaffold50696 ReadM INDEL 0007.scaffold00024 555878 1 A . - ReadM SNP 0007.scaffold00024 555899 1 T G - ReadM SNP 0007.scaffold00024 556011 1 A G - ReadM SNP 0007.scaffold00024 556312 1 C T - ReadM SNP 0007.scaffold00024 556342 1 G C - ReadM SNP 0007.scaffold00024 556409 1 A T - ReadM SNP 0007.scaffold00024 556432 1 T A - ScafM SNP 0007.scaffold00024 556536 1 G A scaffold15135 ScafM SNP 0007.scaffold00024 556597 2 CA TG scaffold15135 ScafM INDEL 0007.scaffold00024 556849 1 C . scaffold15135 ReadM SNP 0007.scaffold00024 556856 1 C T - ReadM SNP 0007.scaffold00024 556862 1 C T - ScafM SNP 0007.scaffold00024 556869 2 AT CC scaffold15135 Both SNP 0007.scaffold00024 556884 1 A T scaffold15135 ScafM INDEL 0007.scaffold00024 556903 1 . C scaffold15135 ScafM SNP 0007.scaffold00024 556978 1 G T scaffold15135 ScafM SNP 0007.scaffold00024 557022 1 G T scaffold15135 ScafM SNP 0007.scaffold00024 557025 1 C A scaffold15135 ScafM SNP 0007.scaffold00024 557082 1 A T scaffold15135 ScafM SNP 0007.scaffold00024 557112 1 G A scaffold15135 ScafM INDEL 0007.scaffold00024 557118 1 T . scaffold15135 ScafM SNP 0007.scaffold00024 557150 1 G T scaffold15135 ScafM SNP 0007.scaffold00024 557307 1 C A scaffold15135 ScafM SNP 0007.scaffold00024 557411 2 GT CA scaffold15135 ScafM SNP 0007.scaffold00024 557415 1 C T scaffold15135 ScafM INDEL 0007.scaffold00024 557483 1 . A scaffold15135 ScafM SNP 0007.scaffold00024 557526 1 T G scaffold15135 ScafM SNP 0007.scaffold00024 557545 1 C T scaffold15135 ScafM SNP 0007.scaffold00024 557752 1 A C scaffold15135 ScafM INDEL 0007.scaffold00024 557768 2 CC .G scaffold15135 ScafM SNP 0007.scaffold00024 557778 1 T A scaffold15135 ScafM SNP 0007.scaffold00024 557823 1 T C scaffold15135 ScafM SNP 0007.scaffold00024 557858 1 G C scaffold15135 ScafM SNP 0007.scaffold00024 557895 1 C T scaffold15135 ScafM SNP 0007.scaffold00024 557901 1 A G scaffold15135 ScafM SNP 0007.scaffold00024 557930 1 T C scaffold15135 ScafM SNP 0007.scaffold00024 557937 1 G T scaffold15135 ScafM SNP 0007.scaffold00024 557992 1 G A scaffold15135 ScafM INDEL 0007.scaffold00024 558004 1 . G scaffold15135 ScafM SNP 0007.scaffold00024 558006 1 T G scaffold15135 ScafM SNP 0007.scaffold00024 558036 2 GA CG scaffold15135 ScafM SNP 0007.scaffold00024 558040 1 G T scaffold15135 ScafM SNP 0007.scaffold00024 558052 1 G A scaffold15135 ScafM SNP 0007.scaffold00024 558076 1 A G scaffold15135 ScafM SNP 0007.scaffold00024 558087 1 A G scaffold15135 ScafM INDEL 0007.scaffold00024 558108 1 . G scaffold15135 ScafM INDEL 0007.scaffold00024 558168 1 T . scaffold15135 ScafM SNP 0007.scaffold00024 558196 1 G C scaffold15135 ScafM SNP 0007.scaffold00024 558202 1 A G scaffold15135 ScafM SNP 0007.scaffold00024 558318 1 T G scaffold15135 ScafM SNP 0007.scaffold00024 558326 1 G A scaffold15135 ScafM SNP 0007.scaffold00024 558340 1 T G scaffold15135 ScafM SNP 0007.scaffold00024 558630 1 C A scaffold55562 ScafM SNP 0007.scaffold00024 558679 1 G C scaffold55562 ScafM SNP 0007.scaffold00024 558701 1 C T scaffold55562 Both SNP 0007.scaffold00024 558711 1 G C scaffold55562 ReadM SNP 0007.scaffold00024 558789 1 G A - ReadM SNP 0007.scaffold00024 558812 1 T C - ScafM SNP 0007.scaffold00024 559183 1 A C scaffold55562 Both SNP 0007.scaffold00024 559219 1 T C scaffold55562 ScafM INDEL 0007.scaffold00024 559255 1 . G scaffold55562 ScafM INDEL 0007.scaffold00024 559289 1 . C scaffold55562 ScafM INDEL 0007.scaffold00024 559295 1 A . scaffold55562 ScafM INDEL 0007.scaffold00024 559320 1 A . scaffold55562 ScafM SNP 0007.scaffold00024 559340 1 T A scaffold55562 ScafM SNP 0007.scaffold00024 559393 1 C T scaffold55562 ScafM SNP 0007.scaffold00024 559411 1 T G scaffold55562 ScafM INDEL 0007.scaffold00024 559419 1 . A scaffold55562 ScafM SNP 0007.scaffold00024 559424 1 T A scaffold55562 Both SNP 0007.scaffold00024 559439 1 C T scaffold55562 ScafM SNP 0007.scaffold00024 559471 1 C G scaffold55562 ScafM SNP 0007.scaffold00024 559483 1 A G scaffold55562 ScafM SNP 0007.scaffold00024 559542 1 G A scaffold55562 ScafM SNP 0007.scaffold00024 559664 1 T C scaffold55562 ScafM SNP 0007.scaffold00024 559684 1 G A scaffold55562 ScafM SNP 0007.scaffold00024 559696 1 T C scaffold55562 ReadM SNP 0007.scaffold00024 561053 1 A G - ReadM SNP 0007.scaffold00024 563581 1 T A - ReadM SNP 0007.scaffold00024 563636 1 T G - ReadM SNP 0007.scaffold00024 563641 1 G A - ReadM SNP 0007.scaffold00024 563706 1 A G - ReadM SNP 0007.scaffold00024 563794 1 C A - ReadM SNP 0007.scaffold00024 564039 1 G A - ReadM SNP 0007.scaffold00024 564192 1 G C - ReadM SNP 0007.scaffold00024 564298 1 G C - ReadM SNP 0007.scaffold00024 564447 1 A G - ReadM SNP 0007.scaffold00024 564470 1 T C - ReadM SNP 0007.scaffold00024 564636 1 A C - ReadM SNP 0007.scaffold00024 564779 1 A G - ReadM SNP 0007.scaffold00024 564843 1 C T - ReadM SNP 0007.scaffold00024 564858 1 A T - ReadM SNP 0007.scaffold00024 564911 1 G C - ReadM SNP 0007.scaffold00024 565005 1 T G - ReadM SNP 0007.scaffold00024 565111 1 A T - ReadM SNP 0007.scaffold00024 565181 1 G A - ReadM SNP 0007.scaffold00024 565687 1 A G - ReadM SNP 0007.scaffold00024 566021 1 A G - ReadM SNP 0007.scaffold00024 566447 1 T G - ReadM SNP 0007.scaffold00024 566515 1 A T - ReadM SNP 0007.scaffold00024 566602 1 A C - ReadM SNP 0007.scaffold00024 566726 1 A T - ScafM SNP 0007.scaffold00024 578742 1 G A scaffold1361 ScafM SNP 0007.scaffold00024 578758 1 G C scaffold1361 ScafM SNP 0007.scaffold00024 578767 1 C T scaffold1361 ScafM SNP 0007.scaffold00024 578819 1 C T scaffold1361 ReadM SNP 0007.scaffold00024 579066 1 C T - Both SNP 0007.scaffold00024 579256 1 T C scaffold1361 ScafM SNP 0007.scaffold00024 579277 2 TG CA scaffold1361 ReadM SNP 0007.scaffold00024 579278 1 G A - ScafM SNP 0007.scaffold00024 579311 1 C T scaffold1361 Both SNP 0007.scaffold00024 579356 1 A C scaffold1361 ReadM INDEL 0007.scaffold00024 579417 1 T . - ScafM INDEL 0007.scaffold00024 579417 2 TA .G scaffold1361 ScafM SNP 0007.scaffold00024 579482 1 T A scaffold1361 Both SNP 0007.scaffold00024 579491 1 A T scaffold1361 Both SNP 0007.scaffold00024 579565 1 G A scaffold1361 ScafM SNP 0007.scaffold00024 579624 1 G A scaffold1361 Both SNP 0007.scaffold00024 579685 1 T A scaffold1361 ScafM SNP 0007.scaffold00024 579694 1 C T scaffold1361 ScafM INDEL 0007.scaffold00024 579740 1 C . scaffold1361 Both SNP 0007.scaffold00024 579890 1 G A scaffold1361 Both SNP 0007.scaffold00024 579922 1 A T scaffold1361 ReadM INDEL 0007.scaffold00024 579944 1 . A - ReadM SNP 0007.scaffold00024 579990 1 T C - ReadM SNP 0007.scaffold00024 580061 1 C T - ReadM SNP 0007.scaffold00024 580404 1 T G - ReadM SNP 0007.scaffold00024 580472 1 C T - ReadM SNP 0007.scaffold00024 580744 1 G A - ScafM SNP 0007.scaffold00024 580995 1 T G scaffold40386 ScafM SNP 0007.scaffold00024 581011 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581018 1 G A scaffold40386 ScafM SNP 0007.scaffold00024 581033 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581054 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581066 1 C A scaffold40386 Both SNP 0007.scaffold00024 581217 1 C A scaffold40386 Both SNP 0007.scaffold00024 581273 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581300 1 C A scaffold40386 ReadM SNP 0007.scaffold00024 581338 1 A G - ScafM SNP 0007.scaffold00024 581348 1 G A scaffold40386 Both INDEL 0007.scaffold00024 581358 1 A . scaffold40386 ScafM SNP 0007.scaffold00024 581431 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581443 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 581470 1 T A scaffold40386 ScafM INDEL 0007.scaffold00024 581542 4 AAAA .... scaffold40386 ScafM SNP 0007.scaffold00024 581547 1 G T scaffold40386 ScafM SNP 0007.scaffold00024 581621 1 A T scaffold40386 ScafM SNP 0007.scaffold00024 581644 1 G A scaffold40386 Both SNP 0007.scaffold00024 581674 1 A G scaffold40386 ScafM SNP 0007.scaffold00024 581744 1 G A scaffold40386 ScafM SNP 0007.scaffold00024 581776 1 G C scaffold40386 ScafM SNP 0007.scaffold00024 581842 1 G C scaffold40386 Both SNP 0007.scaffold00024 581910 1 G C scaffold40386 ScafM SNP 0007.scaffold00024 581916 1 T A scaffold40386 ScafM SNP 0007.scaffold00024 581927 1 A G scaffold40386 ScafM SNP 0007.scaffold00024 581953 1 A T scaffold40386 ReadM SNP 0007.scaffold00024 581969 1 G A - ScafM SNP 0007.scaffold00024 581969 1 G T scaffold40386 ScafM SNP 0007.scaffold00024 581997 1 T C scaffold40386 ScafM SNP 0007.scaffold00024 582001 1 A T scaffold40386 ScafM SNP 0007.scaffold00024 582033 1 C T scaffold40386 ScafM SNP 0007.scaffold00024 582037 1 A T scaffold40386 Both SNP 0007.scaffold00024 582051 1 T C scaffold40386 Both SNP 0007.scaffold00024 582517 1 T A scaffold40386 ScafM SNP 0007.scaffold00024 582939 1 G A scaffold40386 ScafM SNP 0007.scaffold00024 583057 1 C T scaffold40386 ReadM SNP 0007.scaffold00024 583544 1 A G - ReadM SNP 0007.scaffold00024 583572 1 T C - ReadM SNP 0007.scaffold00024 583763 1 A G - ReadM SNP 0007.scaffold00024 583956 1 C G - ReadM SNP 0007.scaffold00024 584202 1 G A - ReadM SNP 0007.scaffold00024 584241 1 T C - ReadM SNP 0007.scaffold00024 584304 1 A C - ReadM SNP 0007.scaffold00024 584351 1 T A - ReadM SNP 0007.scaffold00024 584490 1 G C - ReadM SNP 0007.scaffold00024 584720 1 A G - ReadM SNP 0007.scaffold00024 585422 1 G A - ReadM SNP 0007.scaffold00024 585571 1 A G - ReadM SNP 0007.scaffold00024 585830 1 A C - ReadM INDEL 0007.scaffold00024 585992 1 . T - ReadM SNP 0007.scaffold00024 586068 1 A T - ReadM SNP 0007.scaffold00024 586495 1 G T - ReadM SNP 0007.scaffold00024 586913 1 T G - ReadM SNP 0007.scaffold00024 586982 1 G C - ReadM SNP 0007.scaffold00024 587053 1 A C - ReadM INDEL 0007.scaffold00024 587187 1 . C - ReadM INDEL 0007.scaffold00024 587542 1 . A - ScafM INDEL 0007.scaffold00024 587599 2 .. CA scaffold20273 ScafM SNP 0007.scaffold00024 587600 1 G A scaffold20273 ScafM SNP 0007.scaffold00024 587698 1 T C scaffold20273 ScafM SNP 0007.scaffold00024 587730 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 587765 1 T C scaffold20273 ScafM SNP 0007.scaffold00024 587767 1 A C scaffold20273 ScafM SNP 0007.scaffold00024 587787 1 T G scaffold20273 Both SNP 0007.scaffold00024 587815 1 T C scaffold20273 ScafM SNP 0007.scaffold00024 587857 1 T G scaffold20273 ScafM SNP 0007.scaffold00024 587874 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 587924 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 587930 1 A G scaffold20273 ScafM INDEL 0007.scaffold00024 588037 22 ...................... CAAGATCAAGCAAGTCCGCGTT scaffold20273 ScafM INDEL 0007.scaffold00024 588039 11 ........... CCAACAAGCAT scaffold20273 ScafM INDEL 0007.scaffold00024 588040 1 . C scaffold20273 Both SNP 0007.scaffold00024 588098 1 T A scaffold20273 Both SNP 0007.scaffold00024 588108 1 T G scaffold20273 ScafM SNP 0007.scaffold00024 588122 1 T A scaffold20273 ScafM SNP 0007.scaffold00024 588165 1 G A scaffold20273 ScafM SNP 0007.scaffold00024 588209 1 C A scaffold20273 ScafM SNP 0007.scaffold00024 588463 1 C A scaffold20273 Both SNP 0007.scaffold00024 588501 1 G A scaffold20273 ScafM SNP 0007.scaffold00024 588551 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 588597 1 T C scaffold20273 ScafM SNP 0007.scaffold00024 588604 1 A C scaffold20273 ScafM SNP 0007.scaffold00024 588611 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 588616 1 A C scaffold20273 ScafM INDEL 0007.scaffold00024 588625 5 ..... AAAAA scaffold20273 ScafM SNP 0007.scaffold00024 588634 1 T A scaffold20273 ScafM SNP 0007.scaffold00024 588725 1 C T scaffold20273 ScafM SNP 0007.scaffold00024 588728 1 G A scaffold20273 Both SNP 0007.scaffold00024 588797 1 T G scaffold20273 ScafM SNP 0007.scaffold00024 588801 1 T G scaffold20273 ReadM SNP 0007.scaffold00024 588849 1 A C - ReadM INDEL 0007.scaffold00024 589051 3 AAA ... - ScafM SNP 0007.scaffold00024 589213 1 G C scaffold12829 ScafM SNP 0007.scaffold00024 589269 1 G A scaffold12829 ReadM SNP 0007.scaffold00024 589567 1 T C - ReadM SNP 0007.scaffold00024 590550 1 A G - ReadM SNP 0007.scaffold00024 590594 1 A G - ReadM SNP 0007.scaffold00024 590803 1 T A - ReadM SNP 0007.scaffold00024 590808 1 G C - ReadM SNP 0007.scaffold00024 591407 1 A T - ReadM SNP 0007.scaffold00024 591422 1 T C - ReadM SNP 0007.scaffold00024 591469 1 A G - ReadM SNP 0007.scaffold00024 591570 1 T G - ReadM SNP 0007.scaffold00024 591778 1 C T - ReadM SNP 0007.scaffold00024 591830 1 C T - ReadM SNP 0007.scaffold00024 591879 1 C A - ScafM SNP 0007.scaffold00024 592193 1 G A C19654543 Both SNP 0007.scaffold00024 592320 1 G T C19654543 ScafM SNP 0007.scaffold00024 592376 2 CG AT C19654543 Both SNP 0007.scaffold00024 592564 1 G T C19654543 ReadM INDEL 0007.scaffold00024 592949 1 T . - ReadM INDEL 0007.scaffold00024 593110 1 A . - ReadM SNP 0007.scaffold00024 593517 1 T C - ReadM SNP 0007.scaffold00024 593660 1 T C - ReadM SNP 0007.scaffold00024 593887 1 C G - ReadM SNP 0007.scaffold00024 595376 1 A C - ReadM SNP 0007.scaffold00024 595686 1 T A - ReadM SNP 0007.scaffold00024 595799 1 A G - ReadM SNP 0007.scaffold00024 595836 1 A G - ReadM SNP 0007.scaffold00024 595924 1 T G - ReadM SNP 0007.scaffold00024 595960 1 C T - ReadM INDEL 0007.scaffold00024 596112 1 . C - ReadM SNP 0007.scaffold00024 597687 1 A T - ReadM INDEL 0007.scaffold00024 599315 1 T . - ReadM SNP 0007.scaffold00024 599345 1 T C - ReadM INDEL 0007.scaffold00024 599658 1 T . - ReadM SNP 0007.scaffold00024 599943 1 T C - ReadM SNP 0007.scaffold00024 599998 1 G T - ReadM SNP 0007.scaffold00024 600114 1 T A - ReadM SNP 0007.scaffold00024 600280 1 T C - ReadM SNP 0007.scaffold00024 600690 1 C T - ReadM SNP 0007.scaffold00024 601293 1 T C - ReadM SNP 0007.scaffold00024 601336 1 A G - ReadM SNP 0007.scaffold00024 601674 1 G A - ReadM SNP 0007.scaffold00024 601808 1 A G - ReadM SNP 0007.scaffold00024 603633 1 G A - ReadM INDEL 0007.scaffold00024 604213 1 . A - ReadM INDEL 0007.scaffold00024 604710 3 CTA ... - ReadM SNP 0007.scaffold00024 605343 1 C A - ScafM SNP 0007.scaffold00024 605654 1 A T scaffold13462 ScafM SNP 0007.scaffold00024 605986 1 A G scaffold13462 ReadM INDEL 0007.scaffold00024 606400 1 . A - Both SNP 0007.scaffold00024 606431 1 T C scaffold13462 Both SNP 0007.scaffold00024 606597 1 T C scaffold13462 Both SNP 0007.scaffold00024 606715 1 G C scaffold13462 ScafM INDEL 0007.scaffold00024 607467 18 TTGCCTGCTTTACCTACG .................. scaffold13462 ScafM SNP 0007.scaffold00024 607798 1 C T scaffold13462 ReadM SNP 0007.scaffold00024 607974 1 T C - ReadM SNP 0007.scaffold00024 608007 1 A T - ReadM SNP 0007.scaffold00024 608011 1 T C - ReadM SNP 0007.scaffold00024 608052 1 A G - Both SNP 0007.scaffold00024 608096 1 G A scaffold13462 Both SNP 0007.scaffold00024 608141 1 A C scaffold13462 Both SNP 0007.scaffold00024 608181 1 C T scaffold13462 ScafM INDEL 0007.scaffold00024 608389 1 . A scaffold13462 ScafM SNP 0007.scaffold00024 608766 1 C A scaffold13462 ScafM SNP 0007.scaffold00024 609248 1 C T scaffold13462 ScafM SNP 0007.scaffold00024 609312 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 609334 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 609413 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 609498 1 T G scaffold13462 ScafM SNP 0007.scaffold00024 609544 1 T G scaffold13462 ScafM INDEL 0007.scaffold00024 609650 10 .......... CTGATAAAGG scaffold13462 ScafM SNP 0007.scaffold00024 609689 1 G T scaffold13462 ScafM INDEL 0007.scaffold00024 609701 3 ... TCG scaffold13462 ScafM SNP 0007.scaffold00024 609743 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 609748 1 C G scaffold13462 ScafM SNP 0007.scaffold00024 609763 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 609783 1 G A scaffold13462 Both SNP 0007.scaffold00024 609920 1 A C scaffold13462 Both SNP 0007.scaffold00024 609943 1 T A scaffold13462 Both SNP 0007.scaffold00024 610102 1 C A scaffold13462 ScafM SNP 0007.scaffold00024 610208 1 T C scaffold13462 ReadM SNP 0007.scaffold00024 610245 1 T C - ScafM SNP 0007.scaffold00024 610559 1 T C scaffold13462 ScafM SNP 0007.scaffold00024 610644 1 C T scaffold13462 ScafM SNP 0007.scaffold00024 610864 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 610903 1 A G scaffold13462 Both SNP 0007.scaffold00024 612515 1 T G scaffold13462 ScafM SNP 0007.scaffold00024 612530 1 A G scaffold13462 Both SNP 0007.scaffold00024 612576 1 T A scaffold13462 Both SNP 0007.scaffold00024 612636 1 G A scaffold13462 ReadM SNP 0007.scaffold00024 612986 1 T C - Both SNP 0007.scaffold00024 613125 1 T G scaffold13462 Both SNP 0007.scaffold00024 613317 1 A G scaffold13462 Both SNP 0007.scaffold00024 613489 1 C T scaffold13462 Both SNP 0007.scaffold00024 613522 1 A G scaffold13462 ScafM SNP 0007.scaffold00024 613834 1 A G scaffold13462 Both INDEL 0007.scaffold00024 613940 2 AT .. scaffold13462 Both SNP 0007.scaffold00024 614151 1 A G scaffold13462 Both SNP 0007.scaffold00024 614685 1 C T scaffold13462 ScafM SNP 0007.scaffold00024 614797 1 T C scaffold13462 ReadM SNP 0007.scaffold00024 614950 1 A G - ReadM SNP 0007.scaffold00024 614986 1 A G - ReadM SNP 0007.scaffold00024 615245 1 A G - ReadM SNP 0007.scaffold00024 615842 1 G A - ReadM SNP 0007.scaffold00024 616174 1 T G - ReadM SNP 0007.scaffold00024 616306 1 A C - ReadM SNP 0007.scaffold00024 616362 1 T C - ReadM SNP 0007.scaffold00024 616505 1 T C - ReadM SNP 0007.scaffold00024 616635 1 A T - ReadM SNP 0007.scaffold00024 616769 1 T C - ReadM SNP 0007.scaffold00024 617327 1 T C - ReadM SNP 0007.scaffold00024 617535 1 T C - ReadM SNP 0007.scaffold00024 617911 1 C T - ReadM SNP 0007.scaffold00024 617963 1 G A - ReadM SNP 0007.scaffold00024 618389 1 A T - ReadM SNP 0007.scaffold00024 618423 1 T C - ScafM SNP 0007.scaffold00024 619271 1 T G scaffold13462 ScafM SNP 0007.scaffold00024 619383 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 619390 1 T G scaffold13462 ScafM SNP 0007.scaffold00024 619452 2 GC CT scaffold13462 Both SNP 0007.scaffold00024 619759 1 C G scaffold13462 Both SNP 0007.scaffold00024 619826 1 C G scaffold13462 ReadM SNP 0007.scaffold00024 619866 1 G T - ReadM SNP 0007.scaffold00024 620034 1 C G - ReadM SNP 0007.scaffold00024 620105 1 G A - ReadM SNP 0007.scaffold00024 620460 1 G A - ReadM SNP 0007.scaffold00024 620889 1 T C - ReadM SNP 0007.scaffold00024 621225 1 T C - Both SNP 0007.scaffold00024 621488 1 G A scaffold13462 ScafM INDEL 0007.scaffold00024 621668 1 C . scaffold13462 ScafM SNP 0007.scaffold00024 621769 1 A G scaffold13462 ReadM SNP 0007.scaffold00024 621981 1 A C - Both SNP 0007.scaffold00024 622189 1 A G scaffold13462 ScafM SNP 0007.scaffold00024 622417 1 T C scaffold13462 Both INDEL 0007.scaffold00024 622515 1 T . scaffold13462 ScafM SNP 0007.scaffold00024 622518 1 T A scaffold13462 ScafM SNP 0007.scaffold00024 622525 1 G A scaffold13462 Both SNP 0007.scaffold00024 622534 1 A G scaffold13462 ScafM SNP 0007.scaffold00024 622561 1 C T scaffold13462 ScafM INDEL 0007.scaffold00024 622689 2 AA .. scaffold13462 ScafM SNP 0007.scaffold00024 623361 1 G A scaffold13462 ScafM SNP 0007.scaffold00024 623448 1 C T scaffold13462 ScafM INDEL 0007.scaffold00024 623639 1 . A scaffold13462 ReadM SNP 0007.scaffold00024 625474 1 A G - ReadM SNP 0007.scaffold00024 625519 1 A C - Both SNP 0007.scaffold00024 629281 1 G A scaffold8962 ReadM SNP 0007.scaffold00024 629355 1 G A - ReadM INDEL 0007.scaffold00024 629417 1 A . - ReadM SNP 0007.scaffold00024 629711 1 A G - ReadM SNP 0007.scaffold00024 629740 1 C G - ReadM SNP 0007.scaffold00024 629758 1 A C - ReadM SNP 0007.scaffold00024 629887 1 A G - ReadM SNP 0007.scaffold00024 629916 1 A G - ReadM SNP 0007.scaffold00024 630429 1 C A - ReadM INDEL 0007.scaffold00024 630592 1 . A - ReadM SNP 0007.scaffold00024 630612 1 T C - ReadM SNP 0007.scaffold00024 630670 1 A G - ReadM INDEL 0007.scaffold00024 630712 1 . T - ScafM SNP 0007.scaffold00024 630772 1 T A scaffold8962 ScafM SNP 0007.scaffold00024 632350 1 C A scaffold8962 ScafM SNP 0007.scaffold00024 632352 1 A T scaffold8962 ScafM SNP 0007.scaffold00024 632354 1 C A scaffold8962 ScafM SNP 0007.scaffold00024 632356 1 T G scaffold8962 ScafM INDEL 0007.scaffold00024 632362 8 ........ TCAAGTAT scaffold8962 ScafM SNP 0007.scaffold00024 632462 1 A C scaffold8962 ScafM SNP 0007.scaffold00024 632480 1 C A scaffold8962 ScafM SNP 0007.scaffold00024 632591 1 G A scaffold8962 ScafM SNP 0007.scaffold00024 632663 1 G A scaffold8962 Both SNP 0007.scaffold00024 632856 1 G C scaffold8962 Both SNP 0007.scaffold00024 632880 1 C T scaffold8962 Both INDEL 0007.scaffold00024 632948 1 . A scaffold8962 Both INDEL 0007.scaffold00024 632972 2 GC .. scaffold8962 ScafM SNP 0007.scaffold00024 633051 1 C T scaffold8962 ScafM INDEL 0007.scaffold00024 633058 3 AAA .TT scaffold8962 ScafM INDEL 0007.scaffold00024 633074 1 A . scaffold8962 ScafM SNP 0007.scaffold00024 633194 1 C T scaffold8962 ScafM SNP 0007.scaffold00024 633199 1 T A scaffold8962 ScafM SNP 0007.scaffold00024 633224 1 A C scaffold8962 ScafM SNP 0007.scaffold00024 633549 1 C T scaffold8962 ReadM SNP 0007.scaffold00024 634575 1 T C - ReadM SNP 0007.scaffold00024 634706 1 T A - ReadM SNP 0007.scaffold00024 635332 1 A C - ScafM SNP 0007.scaffold00024 635702 1 T C scaffold6091 ReadM SNP 0007.scaffold00024 636943 1 G C - ReadM SNP 0007.scaffold00024 637082 1 C T - ReadM SNP 0007.scaffold00024 637120 1 A G - ReadM SNP 0007.scaffold00024 637581 1 T C - ReadM SNP 0007.scaffold00024 637661 1 A G - ReadM SNP 0007.scaffold00024 637804 1 C A - ReadM SNP 0007.scaffold00024 637873 1 T C - ReadM SNP 0007.scaffold00024 638001 1 T C - ReadM SNP 0007.scaffold00024 638130 1 T C - ReadM SNP 0007.scaffold00024 638216 1 G A - ReadM SNP 0007.scaffold00024 638220 1 C T - ReadM SNP 0007.scaffold00024 638224 1 C G - ReadM INDEL 0007.scaffold00024 638295 1 . C - ReadM SNP 0007.scaffold00024 638630 1 C G - ReadM SNP 0007.scaffold00024 638643 1 G C - ReadM SNP 0007.scaffold00024 638836 1 T C - ReadM SNP 0007.scaffold00024 639050 1 C G - ReadM SNP 0007.scaffold00024 639280 1 A G - ReadM SNP 0007.scaffold00024 639807 1 A G - ReadM SNP 0007.scaffold00024 640377 1 C A - ReadM SNP 0007.scaffold00024 640558 1 A G - ReadM SNP 0007.scaffold00024 640643 1 T A - ScafM SNP 0007.scaffold00024 640888 1 G A scaffold6091 ReadM SNP 0007.scaffold00024 641165 1 A G - ReadM SNP 0007.scaffold00024 641396 1 T C - ReadM SNP 0007.scaffold00024 642052 1 A C - ScafM SNP 0007.scaffold00024 642182 1 T A scaffold53801 ScafM SNP 0007.scaffold00024 642210 1 G A scaffold53801 ScafM SNP 0007.scaffold00024 642436 1 G C scaffold53801 ScafM SNP 0007.scaffold00024 642452 1 C T scaffold53801 ScafM INDEL 0007.scaffold00024 642515 1 T . scaffold53801 ScafM SNP 0007.scaffold00024 642639 1 T A scaffold53801 Both SNP 0007.scaffold00024 642909 1 A C scaffold53801 ScafM SNP 0007.scaffold00024 643070 1 T C scaffold53801 ScafM SNP 0007.scaffold00024 643087 1 C T scaffold53801 ScafM SNP 0007.scaffold00024 643100 1 T G scaffold53801 ScafM INDEL 0007.scaffold00024 643429 1 A . scaffold53801 ScafM INDEL 0007.scaffold00024 643558 2 .A CT scaffold53801 ScafM SNP 0007.scaffold00024 643561 1 A T scaffold53801 ScafM SNP 0007.scaffold00024 643626 1 C A scaffold53801 ScafM SNP 0007.scaffold00024 643703 1 A C scaffold53801 ScafM SNP 0007.scaffold00024 643728 1 A T scaffold53801 ReadM SNP 0007.scaffold00024 645558 1 A G - ReadM SNP 0007.scaffold00024 645688 1 A T - ReadM SNP 0007.scaffold00024 645935 1 A G - ReadM SNP 0007.scaffold00024 647093 1 A G - ReadM SNP 0007.scaffold00024 647258 1 C T - ReadM SNP 0007.scaffold00024 647479 1 A G - ReadM SNP 0007.scaffold00024 647847 1 T C - Both SNP 0007.scaffold00024 648364 1 T C scaffold39300 Both SNP 0007.scaffold00024 648936 1 G A scaffold39300 Both SNP 0007.scaffold00024 649036 1 G A scaffold39300 ScafM SNP 0007.scaffold00024 650677 1 C T C19666379 Both SNP 0007.scaffold00024 650791 1 T C C19666379 ScafM SNP 0007.scaffold00024 650891 1 G A C19666379 Both SNP 0007.scaffold00024 650936 1 T C C19666379 ScafM SNP 0007.scaffold00024 650948 1 G A C19666379 ScafM SNP 0007.scaffold00024 651011 1 C T C19666379 ReadM SNP 0007.scaffold00024 651126 1 T G - ReadM SNP 0007.scaffold00024 651485 1 C T - ReadM SNP 0007.scaffold00024 651671 1 G C - ReadM SNP 0007.scaffold00024 652083 1 T G - ReadM SNP 0007.scaffold00024 652425 1 T C - ReadM SNP 0007.scaffold00024 652598 1 C T - ReadM SNP 0007.scaffold00024 652879 1 A G - ReadM SNP 0007.scaffold00024 652964 1 C T - ReadM SNP 0007.scaffold00024 653465 1 G A - ReadM SNP 0007.scaffold00024 653491 1 G A - ReadM SNP 0007.scaffold00024 653792 1 G A - ReadM SNP 0007.scaffold00024 654447 1 C T - ReadM SNP 0007.scaffold00024 654543 1 A T - ReadM SNP 0007.scaffold00024 654621 1 G C - ReadM SNP 0007.scaffold00024 654952 1 C T - ReadM SNP 0007.scaffold00024 655011 1 A G - ReadM SNP 0007.scaffold00024 655141 1 T C - ReadM SNP 0007.scaffold00024 655327 1 A G - ReadM SNP 0007.scaffold00024 655659 1 T G - ScafM SNP 0007.scaffold00024 656439 1 T A scaffold39300 ScafM SNP 0007.scaffold00024 656472 1 C A scaffold39300 ReadM SNP 0007.scaffold00024 657414 1 C G - ReadM INDEL 0007.scaffold00024 657418 1 . A - ReadM SNP 0007.scaffold00024 657750 1 G A - ReadM SNP 0007.scaffold00024 658770 1 A G - ReadM SNP 0007.scaffold00024 659126 1 A G - Both SNP 0007.scaffold00024 660169 1 A G scaffold13563 ScafM SNP 0007.scaffold00024 660230 1 G A scaffold13563 ScafM SNP 0007.scaffold00024 660243 1 G A scaffold13563 ScafM SNP 0007.scaffold00024 660282 1 A C scaffold13563 ScafM SNP 0007.scaffold00024 662502 1 T C scaffold13563 ReadM SNP 0007.scaffold00024 663341 1 T C - ScafM SNP 0007.scaffold00024 663395 1 G A scaffold13563 ScafM SNP 0007.scaffold00024 663398 1 A G scaffold13563 ScafM SNP 0007.scaffold00024 663430 1 C T scaffold13563 ReadM SNP 0007.scaffold00024 664108 1 T G - ScafM SNP 0007.scaffold00024 664181 1 C T scaffold13563 ScafM SNP 0007.scaffold00024 664204 1 G A scaffold13563 ScafM SNP 0007.scaffold00024 664220 1 G C scaffold13563 ScafM SNP 0007.scaffold00024 664257 1 C T scaffold13563 ScafM INDEL 0007.scaffold00024 664356 35 AGTCCGAAACCTCGCCGTCGACCTTACCGTCGCTC ................................... scaffold13563 ScafM SNP 0007.scaffold00024 664410 1 C T scaffold13563 ScafM INDEL 0007.scaffold00024 664434 1 . T scaffold13563 ScafM INDEL 0007.scaffold00024 664442 1 . C scaffold13563 ScafM INDEL 0007.scaffold00024 664495 2 .. TT scaffold13563 ScafM SNP 0007.scaffold00024 664497 1 A G scaffold13563 ScafM SNP 0007.scaffold00024 664519 1 A T scaffold13563 ScafM SNP 0007.scaffold00024 664744 1 C T scaffold13563 ReadM SNP 0007.scaffold00024 665078 1 T C - ReadM INDEL 0007.scaffold00024 665112 1 . C - ReadM SNP 0007.scaffold00024 665154 1 G A - ReadM SNP 0007.scaffold00024 665488 1 A G - ReadM SNP 0007.scaffold00024 667312 1 A G - ReadM SNP 0007.scaffold00024 668758 1 C A - Both SNP 0007.scaffold00024 669351 1 C T C19686677 Both SNP 0007.scaffold00024 669362 1 A T C19686677 Both SNP 0007.scaffold00024 669397 1 T A C19686677 Both SNP 0007.scaffold00024 669419 1 T C C19686677 ScafM SNP 0007.scaffold00024 669554 1 T C C19686677 ScafM SNP 0007.scaffold00024 669636 1 C T C19686677 ScafM SNP 0007.scaffold00024 669800 1 G T C19686677 ScafM SNP 0007.scaffold00024 670061 1 T A C19686677 ScafM SNP 0007.scaffold00024 670088 1 C G C19686677 ScafM SNP 0007.scaffold00024 670213 1 T C C19686677 ScafM SNP 0007.scaffold00024 670326 1 C G C19686677 ScafM SNP 0007.scaffold00024 670416 1 C T C19686677 ReadM SNP 0007.scaffold00024 671396 1 A G - ReadM SNP 0007.scaffold00024 674092 1 C T - ReadM SNP 0007.scaffold00024 674200 1 C A - ScafM SNP 0007.scaffold00024 675800 1 C A scaffold8965 ScafM SNP 0007.scaffold00024 675813 1 A G scaffold8965 ScafM INDEL 0007.scaffold00024 675868 2 .C TT scaffold8965 ScafM SNP 0007.scaffold00024 675898 1 C T scaffold8965 ScafM SNP 0007.scaffold00024 675906 1 G A scaffold8965 ScafM SNP 0007.scaffold00024 675930 2 AT TA scaffold8965 ScafM SNP 0007.scaffold00024 675973 1 A C scaffold8965 ScafM SNP 0007.scaffold00024 676057 1 T A scaffold8965 ScafM SNP 0007.scaffold00024 676089 1 A T scaffold8965 ScafM SNP 0007.scaffold00024 676183 1 A G scaffold8965 ReadM SNP 0007.scaffold00024 677322 1 T C - ReadM SNP 0007.scaffold00024 677471 1 T C - ReadM INDEL 0007.scaffold00024 678411 1 C . - ReadM INDEL 0007.scaffold00024 678412 1 T . - ScafM SNP 0007.scaffold00024 679077 1 T C scaffold36279 ScafM SNP 0007.scaffold00024 679305 1 A G scaffold36279 ScafM SNP 0007.scaffold00024 679615 1 T A scaffold36279 ScafM INDEL 0007.scaffold00024 679692 5 ..... AGCCC scaffold36279 ScafM SNP 0007.scaffold00024 680095 1 A T scaffold36279 ScafM SNP 0007.scaffold00024 680395 1 A G scaffold36279 ScafM SNP 0007.scaffold00024 680416 1 T C scaffold36279 ScafM SNP 0007.scaffold00024 680430 1 A C scaffold36279 ScafM SNP 0007.scaffold00024 680440 1 C G scaffold36279 ScafM SNP 0007.scaffold00024 680450 1 G A scaffold36279 ScafM INDEL 0007.scaffold00024 680470 1 . G scaffold36279 ScafM SNP 0007.scaffold00024 680472 1 A G scaffold36279 ScafM SNP 0007.scaffold00024 680495 1 A G scaffold36279 ScafM SNP 0007.scaffold00024 680513 1 G A scaffold36279 ScafM SNP 0007.scaffold00024 680529 1 A G scaffold36279 ScafM SNP 0007.scaffold00024 680550 1 C A scaffold36279 ScafM SNP 0007.scaffold00024 680582 1 G A scaffold36279 ScafM SNP 0007.scaffold00024 680640 1 T C scaffold36279 ReadM SNP 0007.scaffold00024 681373 1 A G - ReadM INDEL 0007.scaffold00024 681940 1 . A - ReadM SNP 0007.scaffold00024 682515 1 A G - ReadM SNP 0007.scaffold00024 682812 1 T C - ReadM INDEL 0007.scaffold00024 682948 1 . T - ReadM SNP 0007.scaffold00024 683189 1 G A - ReadM SNP 0007.scaffold00024 683247 1 A T - ReadM SNP 0007.scaffold00024 683270 1 G A - ReadM INDEL 0007.scaffold00024 687866 1 . A - ReadM SNP 0007.scaffold00024 688488 1 G A - ReadM SNP 0007.scaffold00024 690486 1 C G - Both SNP 0007.scaffold00024 690770 1 T C scaffold10039 ReadM SNP 0007.scaffold00024 690841 1 G A - ScafM SNP 0007.scaffold00024 691050 1 A T scaffold10039 ReadM SNP 0007.scaffold00024 691414 1 C T - ScafM INDEL 0007.scaffold00024 691566 2 .. AT scaffold10039 ScafM SNP 0007.scaffold00024 697433 1 A T scaffold2121 Both INDEL 0007.scaffold00024 697603 1 C . scaffold2121 Both SNP 0007.scaffold00024 697634 1 G C scaffold2121 Both SNP 0007.scaffold00024 697758 1 A G scaffold2121 Both SNP 0007.scaffold00024 697898 1 A T scaffold2121 Both SNP 0007.scaffold00024 697990 1 T G scaffold2121 Both SNP 0007.scaffold00024 698137 1 T C scaffold2121 Both INDEL 0007.scaffold00024 698230 1 . A scaffold2121 ScafM SNP 0007.scaffold00024 699515 1 T C scaffold31684 ScafM SNP 0007.scaffold00024 699543 1 A C scaffold31684 ReadM SNP 0007.scaffold00024 701695 1 A C - ReadM SNP 0007.scaffold00024 702020 1 G A - ReadM SNP 0007.scaffold00024 702615 1 T C - ReadM SNP 0007.scaffold00024 702947 1 A G - ReadM SNP 0007.scaffold00024 703102 1 T C - ReadM INDEL 0007.scaffold00024 703154 1 . G - ReadM SNP 0007.scaffold00024 703916 1 G A - ReadM SNP 0007.scaffold00024 704224 1 C A - ReadM SNP 0007.scaffold00024 704366 1 C T - ReadM SNP 0007.scaffold00024 704409 1 C T - ReadM SNP 0007.scaffold00024 704750 1 T C - ReadM SNP 0007.scaffold00024 704792 1 C G - ReadM SNP 0007.scaffold00024 705051 1 A C - ReadM SNP 0007.scaffold00024 705649 1 T C - ReadM SNP 0007.scaffold00024 705989 1 A G - ReadM SNP 0007.scaffold00024 706142 1 C T - ReadM SNP 0007.scaffold00024 706187 1 T C - ReadM SNP 0007.scaffold00024 706304 1 A G - ReadM SNP 0007.scaffold00024 706308 1 C T - ReadM SNP 0007.scaffold00024 707392 1 C G - ReadM SNP 0007.scaffold00024 707915 1 G C - ReadM SNP 0007.scaffold00024 708502 1 T A - ReadM SNP 0007.scaffold00024 708895 1 C T - ScafM SNP 0007.scaffold00024 710941 2 GT AA scaffold18495 ScafM SNP 0007.scaffold00024 710975 1 C G scaffold18495 ScafM SNP 0007.scaffold00024 711101 2 TC CT scaffold4878 ScafM SNP 0007.scaffold00024 711117 1 T C scaffold4878 ScafM SNP 0007.scaffold00024 711228 1 T C scaffold4878 ScafM SNP 0007.scaffold00024 711253 1 A G scaffold4878 ScafM INDEL 0007.scaffold00024 711304 10 .......... CTCTCTCCAC scaffold4878 ScafM INDEL 0007.scaffold00024 711305 1 . C scaffold4878 ScafM SNP 0007.scaffold00024 711341 1 A G scaffold4878 ScafM SNP 0007.scaffold00024 711440 1 G T scaffold4878 ScafM SNP 0007.scaffold00024 711451 1 G A scaffold4878 ScafM INDEL 0007.scaffold00024 711483 1 . A scaffold4878 ScafM SNP 0007.scaffold00024 711521 1 C T scaffold4878 ScafM SNP 0007.scaffold00024 711523 1 G A scaffold4878 ScafM SNP 0007.scaffold00024 711553 1 A G scaffold4878 ScafM SNP 0007.scaffold00024 711559 1 C T scaffold4878 ScafM INDEL 0007.scaffold00024 711628 1 T . scaffold4878 ScafM SNP 0007.scaffold00024 711643 1 A G scaffold4878 ScafM SNP 0007.scaffold00024 711646 1 A G scaffold4878 ReadM SNP 0007.scaffold00024 713962 1 T G - ReadM INDEL 0007.scaffold00024 714045 1 . G - ReadM SNP 0007.scaffold00024 714408 1 T C - ReadM SNP 0007.scaffold00024 714410 1 G A - ReadM SNP 0007.scaffold00024 714464 1 A G - ReadM SNP 0007.scaffold00024 714669 1 T C - ReadM SNP 0007.scaffold00024 714937 1 G A - Both SNP 0007.scaffold00024 715209 1 A G scaffold2121 Both SNP 0007.scaffold00024 715266 1 T C scaffold2121 Both SNP 0007.scaffold00024 715281 1 G A scaffold2121 Both SNP 0007.scaffold00024 715914 1 G A scaffold2121 Both SNP 0007.scaffold00024 715951 1 G A scaffold2121 Both SNP 0007.scaffold00024 716020 1 G T scaffold2121 Both SNP 0007.scaffold00024 716130 1 T C scaffold2121 ReadM SNP 0007.scaffold00024 716218 1 A G - ReadM SNP 0007.scaffold00024 718800 1 C A - ReadM SNP 0007.scaffold00024 718910 1 T A - ReadM SNP 0007.scaffold00024 718998 1 A C - ReadM SNP 0007.scaffold00024 719389 1 T C - ReadM SNP 0007.scaffold00024 719809 1 C T - ReadM SNP 0007.scaffold00024 720279 1 C T - ReadM SNP 0007.scaffold00024 720401 1 C T - ReadM SNP 0007.scaffold00024 720599 1 G A - ReadM SNP 0007.scaffold00024 720631 1 G A - ReadM SNP 0007.scaffold00024 721173 1 A G - ReadM SNP 0007.scaffold00024 729463 1 A G - Both SNP 0007.scaffold00024 729653 1 G C scaffold2121 ScafM SNP 0007.scaffold00024 729696 1 C T scaffold2121 ReadM SNP 0007.scaffold00024 729743 1 G T - ReadM SNP 0007.scaffold00024 730162 1 T C - ReadM SNP 0007.scaffold00024 730296 1 C G - ReadM SNP 0007.scaffold00024 730452 1 A G - ReadM SNP 0007.scaffold00024 730501 1 G C - ReadM SNP 0007.scaffold00024 730603 1 T C - ReadM SNP 0007.scaffold00024 731451 1 C G - ReadM SNP 0007.scaffold00024 731751 1 A G - ReadM SNP 0007.scaffold00024 731915 1 T A - Both SNP 0007.scaffold00024 732382 1 T C scaffold2121 ScafM SNP 0007.scaffold00024 732484 1 A G scaffold2121 ReadM SNP 0007.scaffold00024 732609 1 T C - ReadM SNP 0007.scaffold00024 732792 1 G C - ReadM SNP 0007.scaffold00024 733946 1 G A - ReadM SNP 0007.scaffold00024 734120 1 C T - ReadM SNP 0007.scaffold00024 734243 1 T C - ReadM SNP 0007.scaffold00024 734661 1 A G - ReadM SNP 0007.scaffold00024 736926 1 A G - ScafM SNP 0007.scaffold00024 737946 1 T A scaffold29156 ScafM SNP 0007.scaffold00024 737980 1 G A scaffold29156 ScafM INDEL 0007.scaffold00024 738066 10 .......... TATTTTTATT scaffold29156 ScafM SNP 0007.scaffold00024 738081 1 A G scaffold29156 ScafM SNP 0007.scaffold00024 738101 1 C T scaffold29156 ScafM SNP 0007.scaffold00024 738145 1 C T scaffold29156 ScafM SNP 0007.scaffold00024 738169 1 T G scaffold29156 ScafM SNP 0007.scaffold00024 738184 1 T G scaffold29156 ScafM SNP 0007.scaffold00024 738216 1 A G scaffold29156 ScafM INDEL 0007.scaffold00024 738219 4 .... CCCC scaffold29156 ScafM INDEL 0007.scaffold00024 738258 6 AGAAAA ...... scaffold29156 ScafM SNP 0007.scaffold00024 738269 1 A C scaffold29156 ScafM SNP 0007.scaffold00024 738366 1 C G scaffold29156 ScafM SNP 0007.scaffold00024 738430 1 C T scaffold29156 ScafM SNP 0007.scaffold00024 738459 1 T G scaffold29156 ScafM SNP 0007.scaffold00024 738499 1 A G scaffold29156 ReadM SNP 0007.scaffold00024 744056 1 G T - ReadM SNP 0007.scaffold00024 744195 1 A T - ReadM INDEL 0007.scaffold00024 744270 1 A . - ReadM SNP 0007.scaffold00024 744284 1 A G - ScafM SNP 0007.scaffold00024 744285 1 T G scaffold102 ScafM SNP 0007.scaffold00024 744288 1 C T scaffold102 ScafM SNP 0007.scaffold00024 744291 1 G T scaffold102 ScafM SNP 0007.scaffold00024 744293 1 C T scaffold102 ScafM SNP 0007.scaffold00024 744299 1 T G scaffold102 ScafM SNP 0007.scaffold00024 744302 1 C T scaffold102 ScafM SNP 0007.scaffold00024 744307 1 A C scaffold102 ScafM SNP 0007.scaffold00024 744309 1 A G scaffold102 ScafM SNP 0007.scaffold00024 744339 1 T A scaffold102 ScafM SNP 0007.scaffold00024 744343 1 G A scaffold102 ScafM SNP 0007.scaffold00024 744388 1 T C scaffold102 Both SNP 0007.scaffold00024 744390 1 T C scaffold102 ScafM INDEL 0007.scaffold00024 744427 1 A . scaffold102 Both SNP 0007.scaffold00024 744430 1 C A scaffold102 ScafM INDEL 0007.scaffold00024 744510 35 ................................... AGGGAATAAAGTAGTTTAATGAATTCAAGCACACA scaffold102 ScafM SNP 0007.scaffold00024 744569 1 C G scaffold102 Both SNP 0007.scaffold00024 744609 1 A C scaffold102 ScafM SNP 0007.scaffold00024 744615 2 AA CG scaffold102 ScafM SNP 0007.scaffold00024 744641 1 C A scaffold102 ScafM SNP 0007.scaffold00024 744648 1 C T scaffold102 ScafM INDEL 0007.scaffold00024 744667 2 .. TT scaffold102 ScafM SNP 0007.scaffold00024 744684 1 A G scaffold102 ScafM SNP 0007.scaffold00024 744720 1 G A scaffold102 ScafM SNP 0007.scaffold00024 744806 1 A C scaffold102 ScafM SNP 0007.scaffold00024 744821 1 A T scaffold102 ScafM SNP 0007.scaffold00024 744841 1 A G scaffold102 ScafM SNP 0007.scaffold00024 744863 1 G T scaffold102 ScafM INDEL 0007.scaffold00024 744880 3 TTT ... scaffold102 ScafM SNP 0007.scaffold00024 744887 1 T C scaffold102 ScafM SNP 0007.scaffold00024 744934 1 G T scaffold102 ScafM SNP 0007.scaffold00024 744976 1 C T scaffold102 ScafM SNP 0007.scaffold00024 745035 1 T C scaffold102 ScafM SNP 0007.scaffold00024 745037 1 T G scaffold102 Both SNP 0007.scaffold00024 745059 1 T C scaffold102 ReadM SNP 0007.scaffold00024 745228 1 T C - ReadM SNP 0007.scaffold00024 760417 1 T A - ReadM SNP 0007.scaffold00024 760472 1 G C - ReadM SNP 0007.scaffold00024 760771 1 A C - ReadM SNP 0007.scaffold00024 761046 1 T C - ReadM SNP 0007.scaffold00024 761358 1 A G - ReadM SNP 0007.scaffold00024 761414 1 A G - ReadM SNP 0007.scaffold00024 761498 1 C A - ReadM SNP 0007.scaffold00024 763882 1 T C - ReadM SNP 0007.scaffold00024 764101 1 A G - ReadM SNP 0007.scaffold00024 764152 1 T A - ReadM SNP 0007.scaffold00024 764194 1 G A - ReadM SNP 0007.scaffold00024 764212 1 C T - ReadM SNP 0007.scaffold00024 764262 1 T C - ReadM SNP 0007.scaffold00024 765547 1 G A - ReadM SNP 0007.scaffold00024 767194 1 T C - ReadM SNP 0007.scaffold00024 767269 1 T G - ReadM SNP 0007.scaffold00024 767577 1 T C - ReadM SNP 0007.scaffold00024 767973 1 C T - ReadM SNP 0007.scaffold00024 768571 1 G A - ReadM SNP 0007.scaffold00024 768792 1 T C - ReadM SNP 0007.scaffold00024 768957 1 C G - ReadM SNP 0007.scaffold00024 769390 1 T C - ReadM SNP 0007.scaffold00024 770334 1 G A - ReadM SNP 0007.scaffold00024 770821 1 A G - ReadM SNP 0007.scaffold00024 771132 1 T C - ReadM SNP 0007.scaffold00024 771539 1 T C - ReadM SNP 0007.scaffold00024 771543 1 A T - ReadM SNP 0007.scaffold00024 771739 1 T A - ReadM SNP 0007.scaffold00024 771743 1 T C - ReadM INDEL 0007.scaffold00024 771932 1 C . - ReadM SNP 0007.scaffold00024 771965 1 G T - ReadM SNP 0007.scaffold00024 772045 1 T A - ReadM SNP 0007.scaffold00024 772717 1 G C - ReadM SNP 0007.scaffold00024 772775 1 T C - ReadM INDEL 0007.scaffold00024 772834 1 . A - ReadM SNP 0007.scaffold00024 773583 1 G T - ReadM SNP 0007.scaffold00024 773608 1 T A - Both INDEL 0007.scaffold00024 774271 1 T . scaffold20407 Both SNP 0007.scaffold00024 774524 1 C G scaffold20407 ScafM INDEL 0007.scaffold00024 775362 13 ............. CATATTTTCCGTC scaffold20407 ScafM SNP 0007.scaffold00024 775412 1 G T scaffold20407 ScafM INDEL 0007.scaffold00024 775428 1 A . scaffold20407 ScafM INDEL 0007.scaffold00024 775560 1 . T scaffold20407 ScafM SNP 0007.scaffold00024 775913 1 C A scaffold20407 ScafM INDEL 0007.scaffold00024 775995 1 . T scaffold20407 ScafM INDEL 0007.scaffold00024 776014 1 A . scaffold20407 Both SNP 0007.scaffold00024 776074 1 A G scaffold20407 ScafM SNP 0007.scaffold00024 776172 1 T C scaffold20407 ScafM SNP 0007.scaffold00024 776320 1 G A scaffold20407 Both SNP 0007.scaffold00024 777528 1 T A scaffold20407 Both SNP 0007.scaffold00024 777574 1 G T scaffold20407 ScafM INDEL 0007.scaffold00024 777737 1 . A scaffold20407 ReadM SNP 0007.scaffold00024 778047 1 G T - ReadM SNP 0007.scaffold00024 778385 1 A G - Both INDEL 0007.scaffold00024 778635 1 . A scaffold20407 Both SNP 0007.scaffold00024 779440 1 A T scaffold20407 ReadM SNP 0007.scaffold00024 779674 1 T C - ScafM INDEL 0007.scaffold00024 780105 2 .. AC scaffold5158 ScafM INDEL 0007.scaffold00024 780172 2 .. AC scaffold5158 ScafM INDEL 0007.scaffold00024 780174 3 ..C AGG scaffold5158 ScafM SNP 0007.scaffold00024 780215 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 780242 1 G C scaffold5158 ScafM SNP 0007.scaffold00024 780252 1 T G scaffold5158 ScafM SNP 0007.scaffold00024 780265 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 780464 1 C A scaffold5158 ReadM SNP 0007.scaffold00024 780559 1 T A - ReadM INDEL 0007.scaffold00024 781003 2 TT .. - ReadM SNP 0007.scaffold00024 781808 1 G A - ReadM SNP 0007.scaffold00024 781845 1 G C - ReadM SNP 0007.scaffold00024 781975 1 T G - ReadM SNP 0007.scaffold00024 782571 1 G A - ReadM SNP 0007.scaffold00024 783417 1 C G - ReadM SNP 0007.scaffold00024 783440 1 T C - ReadM SNP 0007.scaffold00024 783443 1 A G - ReadM SNP 0007.scaffold00024 783949 1 T C - ReadM SNP 0007.scaffold00024 784628 1 G A - ReadM SNP 0007.scaffold00024 784664 1 C T - ReadM SNP 0007.scaffold00024 785380 1 A G - ReadM SNP 0007.scaffold00024 786726 1 G A - ReadM SNP 0007.scaffold00024 787803 1 T C - Both SNP 0007.scaffold00024 788451 1 T C scaffold20407 Both SNP 0007.scaffold00024 788640 1 A G scaffold20407 ScafM SNP 0007.scaffold00024 788681 1 C A scaffold20407 ScafM SNP 0007.scaffold00024 788831 1 G A scaffold20407 Both SNP 0007.scaffold00024 789155 1 T C scaffold20407 ReadM SNP 0007.scaffold00024 789824 1 A C - ReadM SNP 0007.scaffold00024 789962 1 G A - ReadM SNP 0007.scaffold00024 790256 1 C T - ReadM SNP 0007.scaffold00024 790541 1 G A - ReadM SNP 0007.scaffold00024 790644 1 A G - ReadM SNP 0007.scaffold00024 790763 1 A G - ReadM SNP 0007.scaffold00024 790919 1 A C - ReadM SNP 0007.scaffold00024 790933 1 T C - ReadM SNP 0007.scaffold00024 791412 1 G T - ScafM SNP 0007.scaffold00024 791695 1 C T scaffold20407 ScafM INDEL 0007.scaffold00024 791763 1 C . scaffold20407 ScafM SNP 0007.scaffold00024 791780 1 C A scaffold20407 Both INDEL 0007.scaffold00024 791803 1 G . scaffold20407 ScafM SNP 0007.scaffold00024 791863 1 C T scaffold20407 ScafM SNP 0007.scaffold00024 792115 2 TA AG scaffold5158 Both SNP 0007.scaffold00024 792164 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 792191 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 792291 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 792295 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 792302 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 792304 1 A C scaffold5158 ScafM SNP 0007.scaffold00024 792372 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 792392 2 CT GC scaffold5158 ScafM SNP 0007.scaffold00024 792407 2 CC TT scaffold5158 ScafM SNP 0007.scaffold00024 792423 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 792428 1 T G scaffold5158 ScafM SNP 0007.scaffold00024 792466 1 G A scaffold5158 ScafM INDEL 0007.scaffold00024 792469 1 A . scaffold5158 ScafM SNP 0007.scaffold00024 792474 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 792495 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 792503 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 792564 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 792574 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 792638 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 792642 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 792650 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 792682 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 792728 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 792757 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 792818 1 T C scaffold5158 ScafM INDEL 0007.scaffold00024 792821 2 .C AA scaffold5158 ScafM SNP 0007.scaffold00024 792845 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 792860 2 TA GG scaffold5158 ScafM SNP 0007.scaffold00024 792908 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 792914 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 792965 1 C G scaffold5158 ScafM SNP 0007.scaffold00024 793019 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 793069 1 C G scaffold5158 ScafM SNP 0007.scaffold00024 793181 1 C G scaffold5158 ScafM SNP 0007.scaffold00024 793202 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 793205 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 793232 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 793235 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 793272 1 A G scaffold5158 Both SNP 0007.scaffold00024 793306 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 793324 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 793367 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 793371 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 793408 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 793421 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 793497 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 793502 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 793541 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 793543 1 G C scaffold5158 ScafM SNP 0007.scaffold00024 793593 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 793602 2 AA TC scaffold5158 ScafM SNP 0007.scaffold00024 793755 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 793807 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 793823 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 793866 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 793888 2 AT GG scaffold5158 ScafM SNP 0007.scaffold00024 793955 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 794004 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 794007 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 794009 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 794011 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 794014 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 794016 1 T A scaffold5158 Both SNP 0007.scaffold00024 794042 1 A T scaffold5158 Both SNP 0007.scaffold00024 794064 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 794133 1 T G scaffold5158 ScafM SNP 0007.scaffold00024 794175 1 A C scaffold5158 ScafM SNP 0007.scaffold00024 794193 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 794237 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 794260 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 794282 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 794336 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 794441 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 794455 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 794466 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 794478 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 794504 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 794522 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 794590 1 C A scaffold5158 ReadM INDEL 0007.scaffold00024 794702 1 T . - ScafM SNP 0007.scaffold00024 796328 1 G A scaffold3750 ScafM SNP 0007.scaffold00024 796345 1 G A scaffold3750 ScafM SNP 0007.scaffold00024 796712 1 A G scaffold3750 ScafM SNP 0007.scaffold00024 796714 1 T C scaffold3750 ScafM SNP 0007.scaffold00024 796741 1 C A scaffold3750 ReadM SNP 0007.scaffold00024 796897 1 A C - ReadM SNP 0007.scaffold00024 796959 1 A G - ReadM SNP 0007.scaffold00024 796998 1 T C - ReadM SNP 0007.scaffold00024 797155 1 C A - ReadM SNP 0007.scaffold00024 797159 1 A G - ScafM SNP 0007.scaffold00024 797903 1 T C scaffold3750 Both SNP 0007.scaffold00024 797936 1 T C scaffold3750 Both SNP 0007.scaffold00024 798206 1 T C scaffold3750 Both SNP 0007.scaffold00024 798213 1 C T scaffold3750 ScafM SNP 0007.scaffold00024 798264 1 A T scaffold3750 ScafM SNP 0007.scaffold00024 798309 1 C T scaffold3750 Both SNP 0007.scaffold00024 798506 1 T C scaffold3750 Both SNP 0007.scaffold00024 798513 1 A G scaffold3750 Both SNP 0007.scaffold00024 798596 1 C T scaffold3750 Both SNP 0007.scaffold00024 798661 1 G A scaffold3750 Both SNP 0007.scaffold00024 798699 1 C T scaffold3750 Both SNP 0007.scaffold00024 799527 1 T A scaffold3750 ScafM SNP 0007.scaffold00024 799610 1 G C scaffold3750 Both SNP 0007.scaffold00024 799895 1 G T scaffold3750 ScafM SNP 0007.scaffold00024 799945 1 T C scaffold3750 ReadM SNP 0007.scaffold00024 800147 1 G A - Both SNP 0007.scaffold00024 800250 1 G A scaffold3750 Both SNP 0007.scaffold00024 800287 1 T C scaffold3750 Both SNP 0007.scaffold00024 800369 1 T G scaffold3750 ReadM SNP 0007.scaffold00024 800807 1 A G - ReadM SNP 0007.scaffold00024 801040 1 C T - ReadM SNP 0007.scaffold00024 801092 1 T C - ReadM SNP 0007.scaffold00024 801267 1 A G - ReadM SNP 0007.scaffold00024 801325 1 T C - ReadM SNP 0007.scaffold00024 801531 1 C T - ReadM SNP 0007.scaffold00024 801778 1 T A - ReadM INDEL 0007.scaffold00024 802383 1 . A - Both SNP 0007.scaffold00024 802428 1 T C scaffold3750 ScafM INDEL 0007.scaffold00024 804701 1 . A scaffold3750 Both SNP 0007.scaffold00024 804876 1 C T scaffold3750 ScafM SNP 0007.scaffold00024 805079 1 T C scaffold3750 ScafM SNP 0007.scaffold00024 805084 1 T A scaffold3750 ScafM INDEL 0007.scaffold00024 805129 1 A . scaffold3750 ReadM SNP 0007.scaffold00024 805917 1 T C - ReadM SNP 0007.scaffold00024 806023 1 A T - ReadM INDEL 0007.scaffold00024 806327 1 T . - ReadM SNP 0007.scaffold00024 806921 1 T C - ScafM SNP 0007.scaffold00024 807063 1 C T scaffold759 ScafM SNP 0007.scaffold00024 807065 1 A G scaffold759 ScafM SNP 0007.scaffold00024 807142 1 A C scaffold759 ReadM SNP 0007.scaffold00024 807384 1 A T - ReadM SNP 0007.scaffold00024 809123 1 T A - ReadM SNP 0007.scaffold00024 809400 1 T A - ReadM SNP 0007.scaffold00024 809416 1 G A - ReadM SNP 0007.scaffold00024 810160 1 A G - ScafM SNP 0007.scaffold00024 810412 1 C T scaffold363 ScafM SNP 0007.scaffold00024 810420 1 C T scaffold363 ScafM SNP 0007.scaffold00024 810426 1 C T scaffold363 ScafM SNP 0007.scaffold00024 810435 1 T C scaffold363 ScafM SNP 0007.scaffold00024 810448 1 G A scaffold363 ScafM SNP 0007.scaffold00024 810493 1 G A scaffold363 ScafM SNP 0007.scaffold00024 810546 1 T A scaffold363 ScafM INDEL 0007.scaffold00024 810575 2 .. TG scaffold363 ScafM SNP 0007.scaffold00024 810576 2 AC TT scaffold363 ScafM SNP 0007.scaffold00024 810607 1 T G scaffold363 ScafM SNP 0007.scaffold00024 810609 2 TA AG scaffold363 ReadM SNP 0007.scaffold00024 810642 1 T A - ScafM INDEL 0007.scaffold00024 810748 1 A . scaffold719 ScafM SNP 0007.scaffold00024 810758 1 A G scaffold719 ScafM SNP 0007.scaffold00024 810829 1 C G scaffold719 ReadM SNP 0007.scaffold00024 812261 1 A G - ReadM SNP 0007.scaffold00024 812933 1 C T - ReadM SNP 0007.scaffold00024 812958 1 G A - ReadM SNP 0007.scaffold00024 812969 1 T C - ReadM SNP 0007.scaffold00024 813226 1 G A - ReadM SNP 0007.scaffold00024 813290 1 C T - ScafM SNP 0007.scaffold00024 813948 1 C T scaffold15549 Both SNP 0007.scaffold00024 814065 1 C T scaffold15549 Both SNP 0007.scaffold00024 814107 1 T G scaffold15549 ReadM INDEL 0007.scaffold00024 814863 1 . A - ReadM SNP 0007.scaffold00024 814873 1 T C - ReadM SNP 0007.scaffold00024 814949 1 T C - ScafM SNP 0007.scaffold00024 815350 1 A T scaffold15549 Both SNP 0007.scaffold00024 815697 1 T G scaffold15549 ScafM SNP 0007.scaffold00024 815753 1 T C scaffold15549 ScafM SNP 0007.scaffold00024 815949 1 C G scaffold15549 Both SNP 0007.scaffold00024 815970 1 A G scaffold15549 ScafM INDEL 0007.scaffold00024 816387 7 ACGACTT ....... scaffold15549 ScafM SNP 0007.scaffold00024 816438 1 A T scaffold15549 ScafM SNP 0007.scaffold00024 816883 1 A G scaffold15549 ScafM INDEL 0007.scaffold00024 816954 1 . T scaffold15549 ScafM SNP 0007.scaffold00024 817017 1 A T scaffold15549 ScafM INDEL 0007.scaffold00024 817470 2 TA .. scaffold15549 Both SNP 0007.scaffold00024 818409 1 G A scaffold15549 ReadM SNP 0007.scaffold00024 818894 1 A G - ReadM SNP 0007.scaffold00024 819412 1 A G - ReadM SNP 0007.scaffold00024 819533 1 G A - ReadM SNP 0007.scaffold00024 820318 1 G A - ReadM SNP 0007.scaffold00024 821493 1 A G - ScafM SNP 0007.scaffold00024 823332 1 A G scaffold15549 Both INDEL 0007.scaffold00024 823436 1 G . scaffold15549 ScafM SNP 0007.scaffold00024 823799 1 C T scaffold15549 ScafM SNP 0007.scaffold00024 823860 1 T A scaffold15549 ScafM SNP 0007.scaffold00024 823985 1 T C scaffold15549 ScafM SNP 0007.scaffold00024 824121 1 T G scaffold15549 ScafM SNP 0007.scaffold00024 824405 1 A C scaffold15549 ReadM SNP 0007.scaffold00024 826959 1 T A - ReadM SNP 0007.scaffold00024 827787 1 A G - ReadM SNP 0007.scaffold00024 827917 1 C T - ReadM SNP 0007.scaffold00024 828127 1 C T - ReadM SNP 0007.scaffold00024 828212 1 G A - ReadM SNP 0007.scaffold00024 828253 1 A G - ReadM SNP 0007.scaffold00024 828292 1 A G - ReadM SNP 0007.scaffold00024 828411 1 G A - ReadM SNP 0007.scaffold00024 828441 1 G A - ReadM SNP 0007.scaffold00024 828509 1 G T - ReadM SNP 0007.scaffold00024 828723 1 C T - ReadM SNP 0007.scaffold00024 828740 1 A G - ReadM SNP 0007.scaffold00024 829077 1 G A - ReadM SNP 0007.scaffold00024 829110 1 A T - Both SNP 0007.scaffold00024 829454 1 C T scaffold15549 ReadM SNP 0007.scaffold00024 829525 1 C T - ReadM SNP 0007.scaffold00024 829777 1 T C - ScafM SNP 0007.scaffold00024 831866 1 T A scaffold15549 ReadM SNP 0007.scaffold00024 832112 1 T C - ReadM SNP 0007.scaffold00024 832187 1 A G - ReadM SNP 0007.scaffold00024 832237 1 G A - ReadM SNP 0007.scaffold00024 832422 1 A C - ReadM SNP 0007.scaffold00024 832436 1 T G - ReadM SNP 0007.scaffold00024 833522 1 C T - ReadM SNP 0007.scaffold00024 833686 1 A G - ReadM SNP 0007.scaffold00024 833965 1 G A - ReadM SNP 0007.scaffold00024 833978 1 G A - ReadM SNP 0007.scaffold00024 834028 1 G T - ReadM SNP 0007.scaffold00024 834231 1 G A - ReadM SNP 0007.scaffold00024 834292 1 T A - ReadM SNP 0007.scaffold00024 834319 1 G A - ReadM SNP 0007.scaffold00024 834378 1 C T - ReadM SNP 0007.scaffold00024 834666 1 T C - ReadM SNP 0007.scaffold00024 834861 1 T C - Both SNP 0007.scaffold00024 835583 1 A G scaffold15549 ReadM SNP 0007.scaffold00024 835769 1 C G - ReadM SNP 0007.scaffold00024 836106 1 A T - ReadM SNP 0007.scaffold00024 836112 1 T G - ReadM SNP 0007.scaffold00024 836153 1 T A - ReadM SNP 0007.scaffold00024 836736 1 A G - ReadM SNP 0007.scaffold00024 837025 1 A T - ReadM SNP 0007.scaffold00024 837516 1 A C - ReadM SNP 0007.scaffold00024 838420 1 T C - ReadM SNP 0007.scaffold00024 838499 1 A G - ReadM SNP 0007.scaffold00024 838539 1 T C - ReadM SNP 0007.scaffold00024 838995 1 A T - ReadM SNP 0007.scaffold00024 839065 1 C T - ScafM SNP 0007.scaffold00024 841675 1 A G scaffold47591 ScafM INDEL 0007.scaffold00024 841821 2 CT .. scaffold47591 ScafM SNP 0007.scaffold00024 841852 1 G A scaffold47591 ScafM INDEL 0007.scaffold00024 841889 9 ......... GTTGTCGGC scaffold47591 ScafM INDEL 0007.scaffold00024 841892 9 ......... AGCGCTTCG scaffold47591 ScafM INDEL 0007.scaffold00024 841893 2 .. TG scaffold47591 ScafM INDEL 0007.scaffold00024 841900 17 ................. CTCCGTCTTCTTCGCCC scaffold47591 ScafM SNP 0007.scaffold00024 841929 1 T C scaffold47591 ScafM SNP 0007.scaffold00024 842427 1 A G scaffold8525 ScafM SNP 0007.scaffold00024 842485 2 AA TT scaffold8525 ScafM INDEL 0007.scaffold00024 842542 2 .. TT scaffold8525 ScafM SNP 0007.scaffold00024 842654 1 G T scaffold8525 ScafM SNP 0007.scaffold00024 842693 1 T G scaffold8525 ReadM SNP 0007.scaffold00024 842964 1 G A - ReadM SNP 0007.scaffold00024 843548 1 T C - ReadM SNP 0007.scaffold00024 843698 1 T C - ReadM SNP 0007.scaffold00024 844114 1 T C - ScafM SNP 0007.scaffold00024 844766 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 844778 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 844783 1 G C scaffold5158 ScafM SNP 0007.scaffold00024 844785 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 844806 1 C G scaffold5158 ScafM SNP 0007.scaffold00024 844815 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 844832 1 A G scaffold5158 ScafM SNP 0007.scaffold00024 844848 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 844876 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 844893 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 844912 1 G C scaffold5158 ScafM SNP 0007.scaffold00024 844999 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 845008 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 845105 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 845115 1 G C scaffold5158 ScafM INDEL 0007.scaffold00024 845816 3 GTT ... scaffold5158 ReadM INDEL 0007.scaffold00024 845817 1 T . - ScafM SNP 0007.scaffold00024 845854 1 A T scaffold5158 ScafM SNP 0007.scaffold00024 845869 1 A G scaffold5158 ScafM INDEL 0007.scaffold00024 845876 4 TTTT .... scaffold5158 ScafM SNP 0007.scaffold00024 845900 1 G A scaffold5158 ScafM SNP 0007.scaffold00024 845984 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 845993 1 C T scaffold5158 ScafM SNP 0007.scaffold00024 846013 1 A C scaffold5158 ScafM SNP 0007.scaffold00024 846069 1 C A scaffold5158 ScafM SNP 0007.scaffold00024 846072 1 G T scaffold5158 ScafM SNP 0007.scaffold00024 846159 1 T A scaffold5158 ScafM SNP 0007.scaffold00024 846182 1 T C scaffold5158 ScafM SNP 0007.scaffold00024 846188 1 C T scaffold5158 ScafM INDEL 0007.scaffold00024 846212 1 G . scaffold5158 ScafM SNP 0007.scaffold00024 846468 1 A G scaffold33530 ScafM SNP 0007.scaffold00024 846574 1 A G scaffold33530 ScafM INDEL 0007.scaffold00024 846713 23 AATACAATATCTTCTACATGCTA ....................... scaffold33530 ScafM SNP 0007.scaffold00024 846792 1 T C scaffold33530 ScafM SNP 0007.scaffold00024 846946 1 C T scaffold33530 ScafM SNP 0007.scaffold00024 847190 1 A T scaffold33530 Both SNP 0007.scaffold00024 847204 1 T C scaffold33530 ScafM SNP 0007.scaffold00024 847220 1 C T scaffold33530 ScafM SNP 0007.scaffold00024 847236 1 A C scaffold33530 ScafM SNP 0007.scaffold00024 847243 1 T G scaffold33530 ScafM SNP 0007.scaffold00024 847253 1 A G scaffold33530 ScafM INDEL 0007.scaffold00024 847713 1 T . scaffold33530 ScafM SNP 0007.scaffold00024 847803 1 A T scaffold33530 ScafM SNP 0007.scaffold00024 847855 1 T C scaffold33530 ScafM SNP 0007.scaffold00024 847871 1 T C scaffold33530 ScafM SNP 0007.scaffold00024 847912 1 G T scaffold33530 ScafM SNP 0007.scaffold00024 848004 1 C T scaffold33530 ScafM SNP 0007.scaffold00024 848063 1 A G scaffold33530 ScafM INDEL 0007.scaffold00024 848435 5 ..... GAGAA scaffold22365 ScafM SNP 0007.scaffold00024 848486 1 C T scaffold22365 ReadM INDEL 0007.scaffold00024 849087 1 A . - ReadM SNP 0007.scaffold00024 849184 1 G A - ReadM SNP 0007.scaffold00024 849269 1 A G - ReadM SNP 0007.scaffold00024 849273 1 C G - ReadM SNP 0007.scaffold00024 849334 1 T G - ReadM SNP 0007.scaffold00024 849480 1 A G - ReadM SNP 0007.scaffold00024 849553 1 T A - ReadM SNP 0007.scaffold00024 849765 1 T C - ReadM SNP 0007.scaffold00024 849912 1 T C - ReadM SNP 0007.scaffold00024 850492 1 A G - ReadM SNP 0007.scaffold00024 850553 1 T C - ReadM SNP 0007.scaffold00024 850609 1 A G - ReadM SNP 0007.scaffold00024 851872 1 A G - ReadM SNP 0007.scaffold00024 853060 1 T C - ReadM SNP 0007.scaffold00024 854110 1 T C - ReadM SNP 0007.scaffold00024 854644 1 C A - ReadM SNP 0007.scaffold00024 855070 1 A G - ReadM SNP 0007.scaffold00024 855151 1 T C - ReadM SNP 0007.scaffold00024 855606 1 A T - ReadM SNP 0007.scaffold00024 856072 1 A T - ReadM SNP 0007.scaffold00024 857403 1 T G - ReadM SNP 0007.scaffold00024 857475 1 T C - ReadM SNP 0007.scaffold00024 857614 1 T C - ScafM SNP 0007.scaffold00024 857999 1 G A scaffold26972 ScafM INDEL 0007.scaffold00024 858090 1 . T scaffold26972 ScafM SNP 0007.scaffold00024 858165 1 T C scaffold26972 ScafM INDEL 0007.scaffold00024 858179 2 .. TA scaffold26972 ReadM SNP 0007.scaffold00024 858203 1 A T - ReadM SNP 0007.scaffold00024 858205 1 G C - ScafM SNP 0007.scaffold00024 858347 1 A C scaffold26972 ScafM SNP 0007.scaffold00024 858922 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 858925 1 G A scaffold12318 ScafM INDEL 0007.scaffold00024 858957 1 . C scaffold12318 Both INDEL 0007.scaffold00024 858985 1 . T scaffold12318 ScafM SNP 0007.scaffold00024 859410 1 T A scaffold12318 ScafM SNP 0007.scaffold00024 859422 1 C T scaffold12318 ScafM SNP 0007.scaffold00024 859447 1 C T scaffold12318 ScafM SNP 0007.scaffold00024 859508 2 AT CC scaffold12318 ScafM SNP 0007.scaffold00024 859537 1 G T scaffold12318 ScafM SNP 0007.scaffold00024 859560 1 C T scaffold12318 ScafM INDEL 0007.scaffold00024 860795 1 . T scaffold12318 ScafM INDEL 0007.scaffold00024 860824 2 .. AA scaffold12318 ScafM SNP 0007.scaffold00024 860974 1 C T scaffold12318 ScafM SNP 0007.scaffold00024 861302 1 A C scaffold12318 ScafM INDEL 0007.scaffold00024 861322 1 A . scaffold12318 ScafM INDEL 0007.scaffold00024 861330 2 .C TT scaffold12318 ScafM INDEL 0007.scaffold00024 861336 1 . T scaffold12318 ScafM SNP 0007.scaffold00024 861562 1 C T scaffold12318 ScafM SNP 0007.scaffold00024 861589 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 861613 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 861638 1 G A scaffold12318 ScafM INDEL 0007.scaffold00024 861942 78 .............................................................................. ATGGATTTGTTTTCATTTAGATCATATGGTTTTATATGATTGTTGTAAAGGGAGATATACTCGGTTCTCCTGAAGGGT scaffold12318 ScafM SNP 0007.scaffold00024 862533 1 T A scaffold12318 ScafM SNP 0007.scaffold00024 862541 1 A C scaffold12318 ScafM SNP 0007.scaffold00024 862673 1 T G scaffold12318 ScafM SNP 0007.scaffold00024 862797 1 G A scaffold12318 ScafM SNP 0007.scaffold00024 862853 1 C T scaffold12318 ScafM SNP 0007.scaffold00024 863876 1 T A scaffold12318 ScafM SNP 0007.scaffold00024 864061 1 C A scaffold12318 ScafM SNP 0007.scaffold00024 864533 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 864814 1 G A scaffold12318 ScafM SNP 0007.scaffold00024 865157 1 G A scaffold12318 ScafM SNP 0007.scaffold00024 865495 1 G T scaffold12318 Both SNP 0007.scaffold00024 865515 1 G T scaffold12318 ScafM SNP 0007.scaffold00024 865927 1 G T scaffold12318 ScafM SNP 0007.scaffold00024 866009 1 C G scaffold12318 ScafM SNP 0007.scaffold00024 866320 1 G T scaffold12318 ScafM SNP 0007.scaffold00024 866877 1 G A scaffold12318 ScafM INDEL 0007.scaffold00024 867540 7 GCCTGTA ....... scaffold12318 ScafM INDEL 0007.scaffold00024 867771 73 ......................................................................... TAGTTGGTGTCAGTGTGGTCTTTATCATTAGATTCATTTTATGATTTAATAATCATCTTTCCAAATTCTTAAA scaffold12318 Both SNP 0007.scaffold00024 868017 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 868577 1 G C scaffold12318 Both SNP 0007.scaffold00024 869041 1 G C scaffold12318 ScafM INDEL 0007.scaffold00024 869291 71 ....................................................................... TCTATTTTGTTGAAGGGGGTAAAATTTGTTGGATTATTGGTGGAAAAGGCAAAGAGGCCATTCTACAATTG scaffold12318 ScafM SNP 0007.scaffold00024 869346 1 A T scaffold12318 Both SNP 0007.scaffold00024 869432 1 T C scaffold12318 ScafM INDEL 0007.scaffold00024 869440 1 A . scaffold12318 Both SNP 0007.scaffold00024 870186 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 870627 1 C T scaffold12318 Both SNP 0007.scaffold00024 871240 1 A G scaffold12318 ScafM SNP 0007.scaffold00024 871248 1 T A scaffold12318 ScafM SNP 0007.scaffold00024 871264 1 A T scaffold12318 ScafM SNP 0007.scaffold00024 871282 1 G A scaffold12318 ReadM INDEL 0007.scaffold00024 871555 1 A . - ReadM SNP 0007.scaffold00024 871802 1 T C - ReadM SNP 0007.scaffold00024 872380 1 A G - ScafM SNP 0007.scaffold00024 876256 1 C T scaffold14814 ScafM INDEL 0007.scaffold00024 876266 1 A . scaffold14814 ScafM SNP 0007.scaffold00024 876269 1 A T scaffold14814 Both INDEL 0007.scaffold00024 876311 1 . C scaffold14814 ScafM SNP 0007.scaffold00024 876318 1 A G scaffold14814 ScafM SNP 0007.scaffold00024 876322 1 C T scaffold14814 ScafM SNP 0007.scaffold00024 876422 1 A T scaffold14814 ScafM SNP 0007.scaffold00024 876482 1 C T scaffold14814 ScafM SNP 0007.scaffold00024 876495 1 G T scaffold14814 ScafM SNP 0007.scaffold00024 876538 1 C T scaffold14814 ScafM SNP 0007.scaffold00024 876540 1 A G scaffold14814 ScafM SNP 0007.scaffold00024 876702 1 G A scaffold14814 ScafM SNP 0007.scaffold00024 877130 1 T A scaffold14814 ScafM SNP 0007.scaffold00024 877139 1 A G scaffold14814 ScafM SNP 0007.scaffold00024 877150 1 G T scaffold14814 ScafM SNP 0007.scaffold00024 877154 1 A T scaffold14814 ScafM INDEL 0007.scaffold00024 877161 1 . T scaffold14814 ScafM SNP 0007.scaffold00024 877385 1 A G scaffold14814 ScafM SNP 0007.scaffold00024 877852 1 G T scaffold14814 Both SNP 0007.scaffold00024 877962 1 A T scaffold14814 ScafM SNP 0007.scaffold00024 878145 1 T C scaffold14814 ScafM SNP 0007.scaffold00024 880314 1 G A scaffold3399 ScafM SNP 0007.scaffold00024 880318 1 A G scaffold3399 ScafM SNP 0007.scaffold00024 880334 1 A G scaffold3399 ScafM SNP 0007.scaffold00024 880369 2 CT TG scaffold3399 ScafM SNP 0007.scaffold00024 880532 1 A G scaffold3399 ScafM SNP 0007.scaffold00024 880563 1 T C scaffold3399 ReadM SNP 0007.scaffold00024 880822 1 C T - ReadM SNP 0007.scaffold00024 881501 1 A G - ReadM INDEL 0007.scaffold00024 882779 1 . T - ReadM SNP 0007.scaffold00024 883088 1 T A - ReadM SNP 0007.scaffold00024 883494 1 A G - ReadM SNP 0007.scaffold00024 883506 1 T C - ReadM INDEL 0007.scaffold00024 884202 2 AT .. - ReadM INDEL 0007.scaffold00024 884680 1 G . - ScafM INDEL 0007.scaffold00024 885769 30 .............................. TACGTTATTCAACCGTTTATTTTTAACATT scaffold15442 ScafM INDEL 0007.scaffold00024 885831 6 TTTTTT .....C scaffold15442 Both INDEL 0007.scaffold00024 885863 1 . A scaffold15442 ScafM INDEL 0007.scaffold00024 886023 5 ..... ATACT scaffold15442 Both SNP 0007.scaffold00024 886207 1 C T scaffold15442 ScafM INDEL 0007.scaffold00024 886304 14 .............. TGAATAAAAGTAGG scaffold15442 ScafM INDEL 0007.scaffold00024 886372 1 T . scaffold15442 ScafM SNP 0007.scaffold00024 886383 1 T G scaffold15442 ScafM SNP 0007.scaffold00024 886386 1 A T scaffold15442 ScafM SNP 0007.scaffold00024 886683 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 886785 1 T G scaffold15442 ScafM SNP 0007.scaffold00024 886791 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 887260 1 T A scaffold15442 Both SNP 0007.scaffold00024 887321 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 887331 1 C A scaffold15442 ScafM SNP 0007.scaffold00024 887607 1 G A scaffold15442 ScafM SNP 0007.scaffold00024 887704 1 G C scaffold15442 ScafM SNP 0007.scaffold00024 887789 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 887801 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 887811 2 GG CT scaffold15442 ScafM SNP 0007.scaffold00024 887842 1 T G scaffold15442 ScafM INDEL 0007.scaffold00024 887909 1 . A scaffold15442 ScafM INDEL 0007.scaffold00024 887930 2 CT .. scaffold15442 ScafM INDEL 0007.scaffold00024 888066 1 . T scaffold15442 ScafM SNP 0007.scaffold00024 888070 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 888143 1 A C scaffold15442 ScafM SNP 0007.scaffold00024 888147 1 T A scaffold15442 ScafM SNP 0007.scaffold00024 888170 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 888201 1 C G scaffold15442 ScafM SNP 0007.scaffold00024 888219 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 888280 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 888302 1 T A scaffold15442 ScafM SNP 0007.scaffold00024 888306 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 888312 1 C T scaffold15442 ScafM INDEL 0007.scaffold00024 888353 6 ...... AAAAAA scaffold15442 ScafM SNP 0007.scaffold00024 888355 1 G A scaffold15442 ScafM SNP 0007.scaffold00024 888368 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 888379 1 A C scaffold15442 ScafM SNP 0007.scaffold00024 888390 2 TA GT scaffold15442 ScafM SNP 0007.scaffold00024 888397 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 888427 1 A T scaffold15442 ScafM SNP 0007.scaffold00024 888446 1 T G scaffold15442 ScafM SNP 0007.scaffold00024 888451 1 A G scaffold15442 ScafM SNP 0007.scaffold00024 888537 1 C G scaffold15442 ScafM SNP 0007.scaffold00024 888583 1 G T scaffold15442 ScafM INDEL 0007.scaffold00024 888611 1 . A scaffold15442 ScafM SNP 0007.scaffold00024 888636 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 888707 1 C A scaffold15442 Both SNP 0007.scaffold00024 888727 1 G A scaffold15442 Both SNP 0007.scaffold00024 888756 1 T C scaffold15442 ScafM INDEL 0007.scaffold00024 888757 1 . A scaffold15442 Both SNP 0007.scaffold00024 888819 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 889007 1 G A scaffold15442 ScafM SNP 0007.scaffold00024 889151 3 GGA AAG scaffold15442 ScafM SNP 0007.scaffold00024 889301 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 889330 1 G A scaffold15442 ScafM SNP 0007.scaffold00024 889450 1 T A scaffold15442 ScafM SNP 0007.scaffold00024 889553 1 A T scaffold15442 Both SNP 0007.scaffold00024 889638 1 T G scaffold15442 ScafM SNP 0007.scaffold00024 890020 1 C T scaffold15442 ScafM SNP 0007.scaffold00024 890151 1 A G scaffold15442 Both SNP 0007.scaffold00024 891073 1 G C scaffold15442 ScafM SNP 0007.scaffold00024 892012 3 TGT AAA scaffold15442 ScafM SNP 0007.scaffold00024 892017 3 TTG AAA scaffold15442 ScafM SNP 0007.scaffold00024 892021 4 TCCG AAAA scaffold15442 ScafM INDEL 0007.scaffold00024 892026 9 CTCCCCCTC ......... scaffold15442 ScafM INDEL 0007.scaffold00024 892145 1 T . scaffold15442 ScafM INDEL 0007.scaffold00024 892230 1 G . scaffold15442 Both SNP 0007.scaffold00024 892340 1 T C scaffold15442 Both INDEL 0007.scaffold00024 892421 1 . C scaffold15442 ScafM INDEL 0007.scaffold00024 893014 3 TTT ... scaffold15442 Both SNP 0007.scaffold00024 893025 1 G T scaffold15442 ScafM SNP 0007.scaffold00024 893043 1 G A scaffold15442 ScafM INDEL 0007.scaffold00024 893051 1 . G scaffold15442 ScafM SNP 0007.scaffold00024 893150 1 A C scaffold15442 Both INDEL 0007.scaffold00024 893181 3 ... GCC scaffold15442 ScafM INDEL 0007.scaffold00024 893466 2 .. CT scaffold15442 Both SNP 0007.scaffold00024 893537 1 T C scaffold15442 ScafM SNP 0007.scaffold00024 893583 1 G A scaffold15442 ReadM INDEL 0007.scaffold00024 893623 1 A . - ReadM SNP 0007.scaffold00024 893685 1 C T - ScafM INDEL 0007.scaffold00024 894070 1 A . scaffold15442 ScafM INDEL 0007.scaffold00024 894109 1 . A scaffold15442 ScafM SNP 0007.scaffold00024 895843 1 C G scaffold15442 ScafM INDEL 0007.scaffold00024 895967 1 . A scaffold15442 ScafM INDEL 0007.scaffold00024 895985 4 .ATT TGCA scaffold15442 ScafM SNP 0007.scaffold00024 895991 2 TT AC scaffold15442 ScafM SNP 0007.scaffold00024 895995 5 TTTTT AAAAG scaffold15442 ScafM SNP 0007.scaffold00024 896002 1 C A scaffold15442 ScafM SNP 0007.scaffold00024 896125 1 A G scaffold15442 Both SNP 0007.scaffold00024 896131 1 A G scaffold15442 Both SNP 0007.scaffold00024 896142 1 C A scaffold15442 ReadM SNP 0007.scaffold00024 896332 1 C T - ReadM SNP 0007.scaffold00024 896538 1 C T - ScafM INDEL 0007.scaffold00024 897220 1 C . scaffold15442 Both SNP 0007.scaffold00024 897262 1 A T scaffold15442 Both SNP 0007.scaffold00024 897306 1 C T scaffold15442 ScafM INDEL 0007.scaffold00024 897624 1 . C scaffold15442 Both SNP 0007.scaffold00024 897881 1 A T scaffold15442 Both SNP 0007.scaffold00024 897884 1 A G scaffold15442 Both SNP 0007.scaffold00024 898284 1 C T scaffold15442 ReadM INDEL 0007.scaffold00024 898960 1 A . - ReadM INDEL 0007.scaffold00024 899055 3 ... AAC - ReadM SNP 0007.scaffold00024 902085 1 A C - ReadM SNP 0007.scaffold00024 904548 2 CA TG - ReadM INDEL 0007.scaffold00024 918912 1 . G - ReadM SNP 0007.scaffold00024 919031 1 G A - ReadM SNP 0007.scaffold00024 919585 1 T A - ReadM SNP 0007.scaffold00024 920623 2 AA GG - ReadM SNP 0007.scaffold00024 920739 1 A G - ScafM INDEL 0007.scaffold00024 921066 1 . A scaffold15442 ScafM INDEL 0007.scaffold00024 921080 22 ...................... ACTGTAGTAAGTAAAGTGTAGT scaffold15442 ScafM INDEL 0007.scaffold00024 921082 1 . G scaffold15442 ScafM INDEL 0007.scaffold00024 921084 3 ... ACT scaffold15442 ScafM INDEL 0007.scaffold00024 921086 3 ... TTG scaffold15442 ScafM INDEL 0007.scaffold00024 921088 1 . T scaffold15442 ScafM SNP 0007.scaffold00024 921091 1 G T scaffold15442 ScafM INDEL 0007.scaffold00024 921092 6 ...... AAAAAA scaffold15442 ScafM INDEL 0007.scaffold00024 921093 1 . G scaffold15442 ScafM INDEL 0007.scaffold00024 921097 2 .. TC scaffold15442 ScafM INDEL 0007.scaffold00024 921098 2 .. CT scaffold15442 ScafM INDEL 0007.scaffold00024 921099 3 ... TCT scaffold15442 ScafM SNP 0007.scaffold00024 921101 1 G T scaffold15442 ScafM SNP 0007.scaffold00024 921122 1 T A scaffold15442 Both SNP 0007.scaffold00024 921334 1 C T scaffold15442 Both SNP 0007.scaffold00024 921638 1 A T scaffold15442 ScafM SNP 0007.scaffold00024 921904 1 C G scaffold15442 ReadM SNP 0007.scaffold00024 922404 1 T C - ReadM SNP 0007.scaffold00024 922647 1 A G - Both SNP 0007.scaffold00024 922849 1 G T scaffold15442 Both SNP 0007.scaffold00024 922938 1 G A scaffold15442 ScafM SNP 0007.scaffold00024 923017 1 G T scaffold15442 Both SNP 0007.scaffold00024 923509 1 A C scaffold15442 ReadM SNP 0007.scaffold00024 923619 1 T C - ReadM SNP 0007.scaffold00024 923713 1 G C - ReadM SNP 0007.scaffold00024 924099 1 T C - ScafM SNP 0007.scaffold00024 924631 1 G A scaffold2907 Both SNP 0007.scaffold00024 925002 1 C A scaffold2907 ReadM SNP 0007.scaffold00024 925507 1 G T - ReadM SNP 0007.scaffold00024 925779 1 A G - ReadM SNP 0007.scaffold00024 926056 1 T C - Both SNP 0007.scaffold00024 927707 1 G A scaffold2907 ReadM SNP 0007.scaffold00024 928197 1 C T - ReadM SNP 0007.scaffold00024 928430 1 T C - ScafM SNP 0007.scaffold00024 928628 1 G A scaffold2907 ScafM SNP 0007.scaffold00024 928645 1 T A scaffold2907 ScafM SNP 0007.scaffold00024 928650 1 C G scaffold2907 ReadM SNP 0007.scaffold00024 928985 1 A G - Both SNP 0007.scaffold00024 930518 1 C T scaffold2907 ScafM SNP 0007.scaffold00024 930790 1 A T scaffold2907 Both SNP 0007.scaffold00024 931198 1 C T scaffold2907 Both SNP 0007.scaffold00024 931351 1 T C scaffold2907 Both INDEL 0007.scaffold00024 931440 1 . C scaffold2907 ScafM SNP 0007.scaffold00024 931510 1 G C scaffold2907 Both INDEL 0007.scaffold00024 931525 2 .. CA scaffold2907 Both SNP 0007.scaffold00024 931642 1 A C scaffold2907 Both SNP 0007.scaffold00024 931768 1 G T scaffold2907 ScafM INDEL 0007.scaffold00024 932192 1 . T scaffold2907 ScafM SNP 0007.scaffold00024 932194 1 A T scaffold2907 ScafM SNP 0007.scaffold00024 932196 1 T G scaffold2907 ScafM INDEL 0007.scaffold00024 932198 2 .C TA scaffold2907 Both SNP 0007.scaffold00024 932842 1 T C scaffold2907 ScafM SNP 0007.scaffold00024 933019 1 T G scaffold2907 Both SNP 0007.scaffold00024 933110 1 A T scaffold2907 ScafM SNP 0007.scaffold00024 933136 1 T G scaffold2907 ScafM SNP 0007.scaffold00024 933493 1 G T scaffold2907 ScafM SNP 0007.scaffold00024 934076 1 A G scaffold2907 ScafM INDEL 0007.scaffold00024 936876 1 . T scaffold2907 Both INDEL 0007.scaffold00024 937374 2 .. CT scaffold2907 ScafM SNP 0007.scaffold00024 937599 1 A G scaffold2907 Both SNP 0007.scaffold00024 937770 1 T A scaffold2907 Both SNP 0007.scaffold00024 937772 1 T C scaffold2907 ReadM SNP 0007.scaffold00024 937827 1 G T - ScafM SNP 0007.scaffold00024 940028 1 C G scaffold2907 Both SNP 0007.scaffold00024 940284 1 A G scaffold2907 Both SNP 0007.scaffold00024 940425 1 G T scaffold2907 ScafM SNP 0007.scaffold00024 940523 1 T C scaffold2907 Both SNP 0007.scaffold00024 941208 1 T G scaffold2907 ScafM INDEL 0007.scaffold00024 941877 25 TAATAACCTAATCATTTTCTTTTTT ......................... scaffold2907 ScafM SNP 0007.scaffold00024 941904 2 TT GG scaffold2907 ScafM INDEL 0007.scaffold00024 943502 1 . A scaffold2907 Both SNP 0007.scaffold00024 944250 1 C T scaffold2907 Both SNP 0007.scaffold00024 944595 1 T A scaffold2907 ReadM SNP 0007.scaffold00024 947300 1 C T - ReadM SNP 0007.scaffold00024 947767 1 C T - ScafM SNP 0007.scaffold00024 948439 1 T C scaffold2907 ScafM INDEL 0007.scaffold00024 949999 1 . A scaffold2907 Both SNP 0007.scaffold00024 950325 2 TT CC scaffold2907 Both SNP 0007.scaffold00024 950471 1 A C scaffold2907 Both SNP 0007.scaffold00024 950576 1 A G scaffold2907 ScafM SNP 0007.scaffold00024 953127 1 G A scaffold7464 ScafM SNP 0007.scaffold00024 953135 1 A G scaffold7464 ScafM SNP 0007.scaffold00024 953176 1 G T scaffold7464 ScafM SNP 0007.scaffold00024 953202 1 G A scaffold7464 ScafM SNP 0007.scaffold00024 955378 1 G A scaffold49945 Both INDEL 0007.scaffold00024 955529 1 . G scaffold49945 ScafM SNP 0007.scaffold00024 955602 1 C A scaffold49945 ReadM SNP 0007.scaffold00024 956501 1 T C - ReadM SNP 0007.scaffold00024 956602 1 G A - ReadM SNP 0007.scaffold00024 959309 1 T G - ReadM SNP 0007.scaffold00024 959996 1 C A - ReadM SNP 0007.scaffold00024 960155 1 T C - ReadM SNP 0007.scaffold00024 960398 1 A G - ReadM SNP 0007.scaffold00024 960503 1 C A - ReadM INDEL 0007.scaffold00024 961034 1 . T - ReadM SNP 0007.scaffold00024 962733 1 T C - ReadM SNP 0007.scaffold00024 963026 1 T C - ReadM SNP 0007.scaffold00024 963423 1 A G - ReadM SNP 0007.scaffold00024 963537 1 A T - ReadM SNP 0007.scaffold00024 965013 1 A T - ReadM SNP 0007.scaffold00024 965845 1 T C - ReadM SNP 0007.scaffold00024 966328 1 T C - ReadM SNP 0007.scaffold00024 966765 1 A G - ReadM SNP 0007.scaffold00024 966907 1 C G - ReadM SNP 0007.scaffold00024 967056 1 G A - ReadM SNP 0007.scaffold00024 967659 1 T C - ReadM SNP 0007.scaffold00024 967741 1 T A - ReadM INDEL 0007.scaffold00024 969115 2 AA .. - ScafM SNP 0007.scaffold00024 971426 1 G C scaffold11466 ReadM SNP 0007.scaffold00024 972791 1 A G - ScafM SNP 0007.scaffold00024 972942 1 A C scaffold11466 ReadM SNP 0007.scaffold00024 976316 1 T G - ReadM SNP 0007.scaffold00024 977425 1 A T - ReadM SNP 0007.scaffold00024 977737 1 G C - ReadM SNP 0007.scaffold00024 978098 1 A C - ReadM SNP 0007.scaffold00024 978227 1 G C - ReadM SNP 0007.scaffold00024 978254 1 T G - ReadM SNP 0007.scaffold00024 978462 1 A G - ScafM SNP 0007.scaffold00024 979082 1 T C scaffold11466 ScafM SNP 0007.scaffold00024 981055 1 A T scaffold591 ScafM SNP 0007.scaffold00024 981285 1 G C scaffold591 ScafM SNP 0007.scaffold00024 981431 1 C T scaffold591 ReadM INDEL 0007.scaffold00024 982098 1 T . - ScafM INDEL 0007.scaffold00024 982098 2 TT .C scaffold591 ScafM SNP 0007.scaffold00024 982728 1 G A scaffold591 Both SNP 0007.scaffold00024 982795 1 T A scaffold591 ScafM SNP 0007.scaffold00024 984241 1 C A scaffold591 ReadM SNP 0007.scaffold00024 987465 1 T C - ReadM SNP 0007.scaffold00024 987554 1 A G - ReadM SNP 0007.scaffold00024 987983 1 A G - ReadM SNP 0007.scaffold00024 988409 1 C G - ReadM SNP 0007.scaffold00024 988501 1 C T - ReadM SNP 0007.scaffold00024 989534 1 T G - ReadM SNP 0007.scaffold00024 990040 1 G A - ReadM SNP 0007.scaffold00024 990356 1 C T - ReadM SNP 0007.scaffold00024 990738 1 C T - ReadM SNP 0007.scaffold00024 990807 1 T C - ReadM SNP 0007.scaffold00024 991088 1 A G - ReadM SNP 0007.scaffold00024 991201 1 A G - ReadM SNP 0007.scaffold00024 991257 1 G A - ReadM SNP 0007.scaffold00024 992286 1 A G - ReadM INDEL 0007.scaffold00024 993412 1 T . - ReadM SNP 0007.scaffold00024 993957 1 A G - ReadM SNP 0007.scaffold00024 993961 1 T C - ReadM SNP 0007.scaffold00024 994279 1 A G - ReadM SNP 0007.scaffold00024 994384 1 G C - ReadM SNP 0007.scaffold00024 994468 1 A G - ReadM SNP 0007.scaffold00024 994963 1 T C - ReadM SNP 0007.scaffold00024 995190 1 A T - ReadM SNP 0007.scaffold00024 996244 1 G T - Both SNP 0007.scaffold00024 996335 1 A G scaffold591 ReadM SNP 0007.scaffold00024 997531 1 C T - ReadM SNP 0007.scaffold00024 998345 1 A G - ReadM SNP 0007.scaffold00024 998672 1 T A - ReadM SNP 0007.scaffold00024 999842 1 A G - ReadM SNP 0007.scaffold00024 1000455 1 A G - ReadM SNP 0007.scaffold00024 1000527 1 A G - ScafM SNP 0007.scaffold00024 1001062 1 G A scaffold591 ScafM SNP 0007.scaffold00024 1001119 1 A G scaffold591 ReadM SNP 0007.scaffold00024 1001630 1 G A - ScafM INDEL 0007.scaffold00024 1001847 52 .................................................... CTCAGTAAGTCTCCGAGCCATTTCTGATTCTCTGGGAACAGTAGGAACAGAA scaffold591 ReadM SNP 0007.scaffold00024 1002075 1 A C - ReadM SNP 0007.scaffold00024 1002178 1 A G - ReadM SNP 0007.scaffold00024 1002676 1 T A - ReadM SNP 0007.scaffold00024 1002883 1 T C - ReadM SNP 0007.scaffold00024 1005205 1 T C - ReadM SNP 0007.scaffold00024 1005734 1 T C - Both SNP 0007.scaffold00024 1007464 1 C A scaffold591 ReadM SNP 0007.scaffold00024 1008012 1 A G - ScafM INDEL 0007.scaffold00024 1008655 2 TA .. scaffold591 ReadM SNP 0007.scaffold00024 1009691 1 G C - ScafM SNP 0007.scaffold00024 1010773 1 C A scaffold591 ScafM SNP 0007.scaffold00024 1010862 1 T C scaffold591 ScafM INDEL 0007.scaffold00024 1011136 1 . T scaffold591 ScafM INDEL 0007.scaffold00024 1011173 1 T . scaffold591 ScafM SNP 0007.scaffold00024 1011727 1 A T scaffold591 ScafM SNP 0007.scaffold00024 1011737 1 C T scaffold591 ReadM SNP 0007.scaffold00024 1012755 1 T C - Both SNP 0007.scaffold00024 1013099 1 C G scaffold591 ScafM SNP 0007.scaffold00024 1013108 1 C T scaffold591 ReadM SNP 0007.scaffold00024 1013289 1 C T - ScafM INDEL 0007.scaffold00024 1013741 10 .......... CTCACACACA scaffold591 Both SNP 0007.scaffold00024 1014052 1 C T scaffold591 Both SNP 0007.scaffold00024 1014278 1 C A scaffold591 ReadM SNP 0007.scaffold00024 1014675 1 G T - ScafM SNP 0007.scaffold00024 1014913 1 T C scaffold591 Both SNP 0007.scaffold00024 1015033 1 G A scaffold591 ScafM SNP 0007.scaffold00024 1015341 1 A G scaffold591 ScafM INDEL 0007.scaffold00024 1016539 2 .. TT scaffold591 ScafM SNP 0007.scaffold00024 1017408 1 A C scaffold591 ScafM SNP 0007.scaffold00024 1017619 1 T A scaffold591 ScafM SNP 0007.scaffold00024 1020051 1 C T scaffold591 Both SNP 0007.scaffold00024 1020064 1 G A scaffold591 Both SNP 0007.scaffold00024 1020131 1 T A scaffold591 ScafM SNP 0007.scaffold00024 1020726 1 A T scaffold591 ScafM INDEL 0007.scaffold00024 1020730 4 .... TTAT scaffold591 ScafM INDEL 0007.scaffold00024 1021110 1 A . scaffold591 ReadM SNP 0007.scaffold00024 1021550 1 A G - ReadM INDEL 0007.scaffold00024 1021711 1 . G - Both SNP 0007.scaffold00024 1023182 1 T G scaffold591 Both SNP 0007.scaffold00024 1023315 1 A C scaffold591 ScafM SNP 0007.scaffold00024 1023502 1 C T scaffold591 ScafM INDEL 0007.scaffold00024 1024299 2 .. TT scaffold591 ScafM SNP 0007.scaffold00024 1024813 1 C A scaffold591 Both SNP 0007.scaffold00024 1025126 1 T A scaffold591 Both SNP 0007.scaffold00024 1025304 1 T C scaffold591 ScafM SNP 0007.scaffold00024 1025839 1 G T scaffold591 Both SNP 0007.scaffold00024 1026251 1 A T scaffold591 ScafM SNP 0007.scaffold00024 1026317 1 C T scaffold591 Both SNP 0007.scaffold00024 1026869 1 A G scaffold591 Both SNP 0007.scaffold00024 1026947 1 A C scaffold591 Both SNP 0007.scaffold00024 1028378 1 G T scaffold591 Both SNP 0007.scaffold00024 1028650 1 G A scaffold591 ScafM SNP 0007.scaffold00024 1029472 1 C T scaffold591 ReadM SNP 0007.scaffold00024 1030237 1 C A - ReadM INDEL 0007.scaffold00024 1030378 2 .. GA - Both SNP 0007.scaffold00024 1030413 1 T G scaffold591 Both SNP 0007.scaffold00024 1030837 1 T C scaffold591 Both SNP 0007.scaffold00024 1031555 1 A G scaffold591 Both SNP 0007.scaffold00024 1031838 1 C G scaffold591 ScafM SNP 0007.scaffold00024 1032811 1 C T scaffold591 Both SNP 0007.scaffold00024 1034710 1 C T scaffold591 Both SNP 0007.scaffold00024 1034995 1 T C scaffold591 ScafM INDEL 0007.scaffold00024 1035095 1 . T scaffold591 ReadM SNP 0007.scaffold00024 1035401 1 G C - ScafM INDEL 0007.scaffold00024 1035656 1 A . scaffold591 ScafM SNP 0007.scaffold00024 1036793 1 G T scaffold591 ScafM SNP 0007.scaffold00024 1036828 1 C T scaffold591 Both SNP 0007.scaffold00024 1036936 1 G A scaffold591 Both SNP 0007.scaffold00024 1036959 1 C T scaffold591 ScafM SNP 0007.scaffold00024 1037855 1 T A scaffold591 ReadM SNP 0007.scaffold00024 1038054 1 A T - ScafM SNP 0007.scaffold00024 1038558 1 A C scaffold591 ScafM SNP 0007.scaffold00024 1040054 1 T A scaffold591 Both INDEL 0007.scaffold00024 1040209 1 C . scaffold591 Both SNP 0007.scaffold00024 1040236 1 A C scaffold591 Both SNP 0007.scaffold00024 1040254 1 G A scaffold591 Both SNP 0007.scaffold00024 1040587 1 T A scaffold591 ReadM SNP 0007.scaffold00024 1040993 1 A G - ReadM SNP 0007.scaffold00024 1041144 1 T C - Both SNP 0007.scaffold00024 1041787 1 T A scaffold591 ScafM INDEL 0007.scaffold00024 1041850 1 C . scaffold591 ScafM INDEL 0007.scaffold00024 1041937 2 CC .. scaffold591 ScafM SNP 0007.scaffold00024 1041974 1 T C scaffold591 Both SNP 0007.scaffold00024 1042051 1 T C scaffold591 ScafM SNP 0007.scaffold00024 1042507 1 G A scaffold591 Both SNP 0007.scaffold00024 1042683 1 A C scaffold591 Both SNP 0007.scaffold00024 1043177 1 G C scaffold591 ScafM SNP 0007.scaffold00024 1043289 1 A G scaffold591 ScafM SNP 0007.scaffold00024 1043292 2 AC GT scaffold591 ScafM SNP 0007.scaffold00024 1043310 2 GT AC scaffold591 ScafM SNP 0007.scaffold00024 1043348 1 C T scaffold591 ScafM SNP 0007.scaffold00024 1043375 1 T C scaffold591 ScafM INDEL 0007.scaffold00024 1043398 5 ..... TTGGG scaffold591 ReadM INDEL 0007.scaffold00024 1043400 1 G . - ScafM INDEL 0007.scaffold00024 1043402 1 . A scaffold591 ScafM INDEL 0007.scaffold00024 1043403 4 .... TACT scaffold591 ScafM INDEL 0007.scaffold00024 1043404 1 . C scaffold591 ScafM SNP 0007.scaffold00024 1043419 1 C T scaffold591 ScafM SNP 0007.scaffold00024 1043431 1 C T scaffold591 ScafM INDEL 0007.scaffold00024 1043440 2 .. AT scaffold591 ScafM INDEL 0007.scaffold00024 1043441 1 . A scaffold591 ScafM SNP 0007.scaffold00024 1043446 1 T A scaffold591 ScafM SNP 0007.scaffold00024 1043448 2 GG CA scaffold591 ScafM INDEL 0007.scaffold00024 1043450 1 . G scaffold591 ScafM SNP 0007.scaffold00024 1043452 2 GG CC scaffold591 ScafM INDEL 0007.scaffold00024 1043455 2 .T CA scaffold591 ScafM SNP 0007.scaffold00024 1043469 1 G C scaffold591 ReadM SNP 0007.scaffold00024 1043496 1 A G - ReadM SNP 0007.scaffold00024 1043565 1 A G - ReadM SNP 0007.scaffold00024 1044520 1 A T - ReadM SNP 0007.scaffold00024 1044654 1 G A - ReadM SNP 0007.scaffold00024 1044956 1 A C - ReadM SNP 0007.scaffold00024 1045804 1 T C - ReadM SNP 0007.scaffold00024 1046127 1 T C - ReadM SNP 0007.scaffold00024 1046149 1 T C - ReadM SNP 0007.scaffold00024 1046394 1 T C - ReadM SNP 0007.scaffold00024 1046475 1 A G - ScafM INDEL 0007.scaffold00024 1046839 1 . A scaffold4593 ScafM SNP 0007.scaffold00024 1047359 1 C A scaffold4593 Both SNP 0007.scaffold00024 1048034 1 A T scaffold4593 ScafM SNP 0007.scaffold00024 1049086 1 C T scaffold4593 ReadM SNP 0007.scaffold00024 1049491 1 A C - ReadM SNP 0007.scaffold00024 1050808 1 A G - ReadM SNP 0007.scaffold00024 1050932 1 A G - ReadM SNP 0007.scaffold00024 1051463 1 G A - ReadM SNP 0007.scaffold00024 1051631 1 T C - ReadM SNP 0007.scaffold00024 1051832 1 A T - ReadM INDEL 0007.scaffold00024 1052412 1 . C - ReadM SNP 0007.scaffold00024 1052518 1 T C - ScafM SNP 0007.scaffold00024 1055141 1 C T scaffold4593 Both SNP 0007.scaffold00024 1055421 1 A G scaffold4593 Both INDEL 0007.scaffold00024 1055958 2 .. AG scaffold4593 ReadM SNP 0007.scaffold00024 1056248 1 C T - ReadM SNP 0007.scaffold00024 1056266 1 A G - ReadM SNP 0007.scaffold00024 1056649 1 T G - ReadM SNP 0007.scaffold00024 1057333 1 A G - ReadM SNP 0007.scaffold00024 1057888 1 T C - ReadM SNP 0007.scaffold00024 1058091 1 T C - ReadM SNP 0007.scaffold00024 1058164 1 G A - ReadM SNP 0007.scaffold00024 1058206 1 A T - ReadM SNP 0007.scaffold00024 1058371 1 T C - ReadM SNP 0007.scaffold00024 1058959 1 A G - ReadM SNP 0007.scaffold00024 1059449 1 T C - ReadM SNP 0007.scaffold00024 1059691 1 G T - ReadM SNP 0007.scaffold00024 1059789 1 T G - ReadM SNP 0007.scaffold00024 1059842 1 C A - ReadM SNP 0007.scaffold00024 1060531 1 T C - ReadM SNP 0007.scaffold00024 1060662 1 G T - ReadM SNP 0007.scaffold00024 1061114 1 A G - ReadM SNP 0007.scaffold00024 1061546 1 A G - ReadM SNP 0007.scaffold00024 1061782 1 C G - ReadM SNP 0007.scaffold00024 1063440 1 A C - ReadM SNP 0007.scaffold00024 1063865 1 C T - ReadM SNP 0007.scaffold00024 1063930 1 A G - ScafM SNP 0007.scaffold00024 1064970 1 T C scaffold4593 ScafM SNP 0007.scaffold00024 1065094 1 A G scaffold4593 ReadM SNP 0007.scaffold00024 1065368 1 A G - ScafM SNP 0007.scaffold00024 1065912 1 G T scaffold4593 ScafM SNP 0007.scaffold00024 1065918 1 G A scaffold4593 ScafM INDEL 0007.scaffold00024 1066015 62 .............................................................. CTGTCTCCAAGGAGGTGGTGTCGGCCCGGTCTCCCAAGGAAGGGAGAGGACGGGCGTTGACC scaffold4593 ScafM SNP 0007.scaffold00024 1066046 1 C T scaffold4593 ScafM SNP 0007.scaffold00024 1066098 1 G A scaffold4593 ScafM SNP 0007.scaffold00024 1067163 1 G T scaffold4593 ReadM SNP 0007.scaffold00024 1067389 1 C T - ReadM SNP 0007.scaffold00024 1068009 1 A G - ReadM SNP 0007.scaffold00024 1068345 1 T C - ReadM SNP 0007.scaffold00024 1069081 1 A G - ReadM SNP 0007.scaffold00024 1069273 1 T C - ReadM SNP 0007.scaffold00024 1069660 1 T C - ReadM SNP 0007.scaffold00024 1070204 1 A G - ReadM SNP 0007.scaffold00024 1070513 1 A G - Both SNP 0007.scaffold00024 1070764 1 T C scaffold4593 ScafM SNP 0007.scaffold00024 1070878 1 C T scaffold4593 Both SNP 0007.scaffold00024 1070938 1 A G scaffold4593 ScafM SNP 0007.scaffold00024 1070988 1 G T scaffold4593 ReadM SNP 0007.scaffold00024 1071364 1 C G - ReadM SNP 0007.scaffold00024 1072200 1 A G - ReadM SNP 0007.scaffold00024 1072502 1 A T - ReadM SNP 0007.scaffold00024 1072517 1 A G - ReadM SNP 0007.scaffold00024 1072804 1 A G - ReadM SNP 0007.scaffold00024 1073132 1 A G - Both SNP 0007.scaffold00024 1073851 1 G T scaffold4593 ScafM SNP 0007.scaffold00024 1074236 1 A G scaffold4593 ReadM SNP 0007.scaffold00024 1074294 1 C T - ReadM SNP 0007.scaffold00024 1074773 1 A G - Both SNP 0007.scaffold00024 1074802 1 A C scaffold4593 ScafM SNP 0007.scaffold00024 1076805 1 T C scaffold4593 ScafM SNP 0007.scaffold00024 1076860 1 C T scaffold4593 ScafM INDEL 0007.scaffold00024 1076952 1 A . scaffold4593 ScafM SNP 0007.scaffold00024 1077761 1 T A scaffold4593 ScafM INDEL 0007.scaffold00024 1077842 1 . G scaffold4593 ReadM SNP 0007.scaffold00024 1080544 1 T G - ReadM SNP 0007.scaffold00024 1081082 1 A C - ReadM SNP 0007.scaffold00024 1081483 1 T G - ScafM SNP 0007.scaffold00024 1081759 1 T C scaffold4593 ScafM SNP 0007.scaffold00024 1081814 1 C T scaffold4593 Both SNP 0007.scaffold00024 1081827 1 T G scaffold4593 ScafM SNP 0007.scaffold00024 1081977 1 T A scaffold4593 ScafM SNP 0007.scaffold00024 1082273 1 C T scaffold4593 ScafM SNP 0007.scaffold00024 1082338 1 C T scaffold4593 ScafM INDEL 0007.scaffold00024 1082450 1 T . scaffold4593 ReadM SNP 0007.scaffold00024 1084625 1 G A - Both SNP 0007.scaffold00024 1085653 1 A G scaffold4593 ScafM SNP 0007.scaffold00024 1085693 1 A G scaffold4593 ScafM SNP 0007.scaffold00024 1085808 1 T G scaffold4593 Both INDEL 0007.scaffold00024 1085817 1 T . scaffold4593 ScafM SNP 0007.scaffold00024 1085982 1 A T scaffold4593 ReadM SNP 0007.scaffold00024 1086758 1 A C - ReadM SNP 0007.scaffold00024 1087004 1 C G - Both SNP 0007.scaffold00024 1088431 1 T C scaffold4593 Both SNP 0007.scaffold00024 1088804 1 A T scaffold4593 Both SNP 0007.scaffold00024 1089133 1 T A scaffold1947 ReadM SNP 0007.scaffold00024 1089374 1 A G - ReadM SNP 0007.scaffold00024 1089412 1 T C - ReadM SNP 0007.scaffold00024 1089526 1 T A - ScafM SNP 0007.scaffold00024 1090013 1 A G scaffold1947 Both SNP 0007.scaffold00024 1090193 1 G A scaffold1947 Both SNP 0007.scaffold00024 1090356 1 A G scaffold1947 ReadM SNP 0007.scaffold00024 1091232 1 G A - ScafM INDEL 0007.scaffold00024 1091521 2 TT .. scaffold1947 ScafM SNP 0007.scaffold00024 1091627 1 G T scaffold1947 ScafM SNP 0007.scaffold00024 1092222 1 A G scaffold1947 ScafM SNP 0007.scaffold00024 1092411 1 A G scaffold1947 ScafM SNP 0007.scaffold00024 1092482 1 G T scaffold1947 ReadM SNP 0007.scaffold00024 1092911 1 A C - ReadM SNP 0007.scaffold00024 1093192 1 C T - ScafM SNP 0007.scaffold00024 1093575 1 T C scaffold1947 ScafM INDEL 0007.scaffold00024 1093772 1 T . scaffold1947 ScafM SNP 0007.scaffold00024 1093835 1 A T scaffold1947 ScafM INDEL 0007.scaffold00024 1094158 1 . G scaffold1947 ScafM SNP 0007.scaffold00024 1094214 1 A C scaffold1947 ScafM SNP 0007.scaffold00024 1094362 1 C G scaffold1947 ScafM SNP 0007.scaffold00024 1094498 1 T G scaffold1947 ReadM SNP 0007.scaffold00024 1097679 1 T A - ScafM INDEL 0007.scaffold00024 1099487 3 ... AAA scaffold6830 ScafM SNP 0007.scaffold00024 1099533 2 CC AA scaffold6830 ScafM SNP 0007.scaffold00024 1099550 1 C A scaffold6830 ScafM SNP 0007.scaffold00024 1099608 1 A C scaffold6830 ScafM SNP 0007.scaffold00024 1099681 1 T C scaffold1947 ScafM SNP 0007.scaffold00024 1099934 1 C A scaffold1947 ReadM SNP 0007.scaffold00024 1100789 1 T G - ReadM SNP 0007.scaffold00024 1101995 1 C G - ReadM SNP 0007.scaffold00024 1103144 1 T C - ReadM SNP 0007.scaffold00024 1104462 1 C T - ReadM SNP 0007.scaffold00024 1105204 1 A G - ReadM SNP 0007.scaffold00024 1105666 1 A G - ReadM SNP 0007.scaffold00024 1105830 1 G C - ReadM SNP 0007.scaffold00024 1106449 1 A G - ReadM SNP 0007.scaffold00024 1106718 1 A G - ReadM SNP 0007.scaffold00024 1106732 1 A G - ReadM SNP 0007.scaffold00024 1108081 1 C T - ReadM SNP 0007.scaffold00024 1108682 1 G T - ReadM SNP 0007.scaffold00024 1109207 1 C G - ReadM SNP 0007.scaffold00024 1109553 1 T G - ReadM SNP 0007.scaffold00024 1109569 1 A G - ReadM SNP 0007.scaffold00024 1109963 1 T A - ReadM SNP 0007.scaffold00024 1110251 1 A G - ReadM SNP 0007.scaffold00024 1110826 1 A C - ReadM SNP 0007.scaffold00024 1110981 1 C T - ReadM SNP 0007.scaffold00024 1111136 1 T C - ReadM SNP 0007.scaffold00024 1111144 1 C T - ReadM SNP 0007.scaffold00024 1111623 1 T A - ReadM SNP 0007.scaffold00024 1112056 1 T C - ReadM SNP 0007.scaffold00024 1112241 1 A C - ReadM SNP 0007.scaffold00024 1113090 1 T A - ReadM SNP 0007.scaffold00024 1113239 1 C T - ReadM SNP 0007.scaffold00024 1114077 1 T G - ReadM SNP 0007.scaffold00024 1114470 1 T C - ReadM SNP 0007.scaffold00024 1114771 1 A T - ReadM SNP 0007.scaffold00024 1114931 1 A T - Both SNP 0007.scaffold00024 1115241 1 T C scaffold1947 ReadM SNP 0007.scaffold00024 1115586 1 C A - Both SNP 0007.scaffold00024 1115890 1 A T scaffold1947 ReadM SNP 0007.scaffold00024 1116787 1 T C - ReadM SNP 0007.scaffold00024 1117195 1 G A - ReadM SNP 0007.scaffold00024 1117395 1 T G - ReadM SNP 0007.scaffold00024 1119315 1 G A - ReadM SNP 0007.scaffold00024 1119837 1 C G - ReadM SNP 0007.scaffold00024 1120603 1 T C - ReadM SNP 0007.scaffold00024 1120638 1 A G - ScafM SNP 0007.scaffold00024 1121537 1 C T scaffold1345 Both SNP 0007.scaffold00024 1121577 1 T C scaffold1345 ScafM SNP 0007.scaffold00024 1121632 1 A C scaffold1345 ScafM SNP 0007.scaffold00024 1121658 1 T A scaffold1345 Both SNP 0007.scaffold00024 1121701 1 G C scaffold1345 ScafM SNP 0007.scaffold00024 1121834 1 T A scaffold1345 Both SNP 0007.scaffold00024 1122091 1 A G scaffold1345 ReadM SNP 0007.scaffold00024 1122258 1 T C - ScafM SNP 0007.scaffold00024 1122546 1 C T scaffold1345 ScafM SNP 0007.scaffold00024 1122589 1 A T scaffold1345 Both SNP 0007.scaffold00024 1122693 1 A G scaffold1345 Both SNP 0007.scaffold00024 1123116 1 C T scaffold1345 ScafM SNP 0007.scaffold00024 1123292 1 G T scaffold1345 ReadM SNP 0007.scaffold00024 1123611 1 C T - Both SNP 0007.scaffold00024 1125090 1 C T scaffold1345 ScafM INDEL 0007.scaffold00024 1125096 1 . T scaffold1345 ReadM SNP 0007.scaffold00024 1125257 1 T C - ReadM SNP 0007.scaffold00024 1125283 1 G C - ReadM SNP 0007.scaffold00024 1125318 1 A G - Both SNP 0007.scaffold00024 1125369 1 T G scaffold1345 ReadM SNP 0007.scaffold00024 1125525 1 G C - ReadM SNP 0007.scaffold00024 1125619 1 G T - ScafM SNP 0007.scaffold00024 1125905 1 C A scaffold1345 Both SNP 0007.scaffold00024 1126020 1 T A scaffold1345 ReadM SNP 0007.scaffold00024 1126299 1 A G - ReadM SNP 0007.scaffold00024 1126386 1 C T - ReadM SNP 0007.scaffold00024 1126886 1 C G - ReadM SNP 0007.scaffold00024 1127273 1 A C - ReadM SNP 0007.scaffold00024 1127594 1 A G - ReadM SNP 0007.scaffold00024 1127715 1 T C - ReadM SNP 0007.scaffold00024 1127868 1 T G - ScafM INDEL 0007.scaffold00024 1128812 1 C . scaffold1345 Both SNP 0007.scaffold00024 1129079 1 A G scaffold1345 Both SNP 0007.scaffold00024 1129169 1 T C scaffold1345 Both SNP 0007.scaffold00024 1129419 1 T G scaffold1345 ScafM SNP 0007.scaffold00024 1129474 1 A G scaffold1345 Both SNP 0007.scaffold00024 1129506 1 G A scaffold1345 ScafM INDEL 0007.scaffold00024 1129560 26 .......................... AGAGAGCAAGTGCTCGAGTAGAGGAG scaffold1345 Both SNP 0007.scaffold00024 1129628 1 A C scaffold1345 Both SNP 0007.scaffold00024 1129827 1 T C scaffold1345 ScafM SNP 0007.scaffold00024 1129880 1 G A scaffold1345 Both SNP 0007.scaffold00024 1130016 1 A G scaffold1345 ScafM SNP 0007.scaffold00024 1130045 1 G A scaffold1345 Both SNP 0007.scaffold00024 1130072 1 A G scaffold1345 Both SNP 0007.scaffold00024 1130192 1 A G scaffold1345 Both SNP 0007.scaffold00024 1130367 1 A C scaffold1345 ScafM SNP 0007.scaffold00024 1130758 1 A G scaffold1345 Both SNP 0007.scaffold00024 1130836 1 A G scaffold1345 Both SNP 0007.scaffold00024 1131194 1 A G scaffold1345 ReadM SNP 0007.scaffold00024 1131733 1 C T - ReadM SNP 0007.scaffold00024 1131759 1 A G - ReadM SNP 0007.scaffold00024 1131958 1 C T - Both SNP 0007.scaffold00024 1132100 1 G T scaffold1345 ScafM SNP 0007.scaffold00024 1132307 1 A G scaffold1345 Both SNP 0007.scaffold00024 1132376 1 G C scaffold1345 ScafM INDEL 0007.scaffold00024 1132823 6 CTGCTA ...... scaffold1345 ScafM SNP 0007.scaffold00024 1132873 1 T C scaffold1345 ScafM SNP 0007.scaffold00024 1132943 1 G A scaffold1345 ScafM SNP 0007.scaffold00024 1132951 1 A T scaffold1345 ReadM SNP 0007.scaffold00024 1133084 1 C T - ScafM SNP 0007.scaffold00024 1133210 1 C T scaffold388 ScafM SNP 0007.scaffold00024 1133242 1 A G scaffold388 ScafM SNP 0007.scaffold00024 1133356 1 T G scaffold388 ScafM SNP 0007.scaffold00024 1133436 1 A G scaffold388 ScafM SNP 0007.scaffold00024 1133551 1 A G scaffold388 ScafM INDEL 0007.scaffold00024 1133569 6 ...... CCATTT scaffold388 ScafM SNP 0007.scaffold00024 1133604 1 A C scaffold388 ScafM SNP 0007.scaffold00024 1133607 1 C T scaffold388 ScafM SNP 0007.scaffold00024 1135235 1 T G scaffold1345 ScafM SNP 0007.scaffold00024 1135392 1 C T scaffold1345 ScafM SNP 0007.scaffold00024 1135408 1 A G scaffold1345 Both SNP 0007.scaffold00024 1135521 1 A G scaffold1345 ReadM SNP 0007.scaffold00024 1135718 1 A G - ReadM SNP 0007.scaffold00024 1135771 1 T G - ReadM SNP 0007.scaffold00024 1138799 1 C A - ReadM SNP 0007.scaffold00024 1138890 1 T A - ScafM SNP 0007.scaffold00024 1139638 1 T A scaffold1345 Both SNP 0007.scaffold00024 1140430 1 T C scaffold1345 Both SNP 0007.scaffold00024 1140536 1 A T scaffold1345 ReadM SNP 0007.scaffold00024 1140654 1 G T - ReadM SNP 0007.scaffold00024 1140698 1 C T - ReadM SNP 0007.scaffold00024 1140770 1 G A - ReadM SNP 0007.scaffold00024 1140942 1 A G - ReadM SNP 0007.scaffold00024 1141076 1 G T - ReadM SNP 0007.scaffold00024 1141234 1 C T - Both SNP 0007.scaffold00024 1141618 1 T C scaffold1345 Both SNP 0007.scaffold00024 1141685 1 T G scaffold1345 Both SNP 0007.scaffold00024 1141756 1 C T scaffold1345 Both SNP 0007.scaffold00024 1141787 1 A C scaffold1345 ReadM SNP 0007.scaffold00024 1141873 1 T C - ReadM SNP 0007.scaffold00024 1141877 1 T G - ReadM SNP 0007.scaffold00024 1141920 1 T C - ReadM INDEL 0007.scaffold00024 1142035 1 . A - Both SNP 0007.scaffold00024 1142074 1 A G scaffold1345 ScafM SNP 0007.scaffold00024 1142271 1 G T scaffold1345 Both SNP 0007.scaffold00024 1142481 1 A C scaffold1345 ScafM SNP 0007.scaffold00024 1142603 1 A C scaffold1345 Both SNP 0007.scaffold00024 1142669 1 A G scaffold1345 Both SNP 0007.scaffold00024 1142779 1 A T scaffold1345 Both SNP 0007.scaffold00024 1142817 1 C A scaffold1345 ScafM INDEL 0007.scaffold00024 1142962 4 .... TATA scaffold1345 ScafM SNP 0007.scaffold00024 1143022 1 C T scaffold1345 ReadM SNP 0007.scaffold00024 1143520 1 C T - Both SNP 0007.scaffold00024 1143653 1 T C scaffold1345 ReadM SNP 0007.scaffold00024 1144947 1 T C - ReadM SNP 0007.scaffold00024 1145094 1 A C - ReadM SNP 0007.scaffold00024 1145453 1 C A - ReadM SNP 0007.scaffold00024 1145538 1 T C - ReadM SNP 0007.scaffold00024 1145672 1 T A - ReadM SNP 0007.scaffold00024 1146258 1 A G - ReadM SNP 0007.scaffold00024 1146922 1 G A - ReadM SNP 0007.scaffold00024 1147680 1 A C - ReadM SNP 0007.scaffold00024 1148015 1 A G - ReadM INDEL 0007.scaffold00024 1148142 1 A . - ScafM INDEL 0007.scaffold00024 1148331 1 A . scaffold1345 ScafM INDEL 0007.scaffold00024 1148336 1 A . scaffold1345 Both SNP 0007.scaffold00024 1148515 1 T A scaffold1345 Both SNP 0007.scaffold00024 1148688 1 G A scaffold1345 ReadM SNP 0007.scaffold00024 1149156 1 A G - ReadM SNP 0007.scaffold00024 1150397 1 T C - ReadM SNP 0007.scaffold00024 1150883 1 A G - ReadM SNP 0007.scaffold00024 1151303 1 A C - ScafM SNP 0007.scaffold00024 1151757 1 G A scaffold1345 ScafM SNP 0007.scaffold00024 1152348 1 G C scaffold1345 Both SNP 0007.scaffold00024 1152762 1 G A scaffold1345 ReadM SNP 0007.scaffold00024 1153673 1 T C - ReadM SNP 0007.scaffold00024 1153967 1 A C - ReadM SNP 0007.scaffold00024 1154834 1 C G - ReadM SNP 0007.scaffold00024 1154957 1 G A - ReadM SNP 0007.scaffold00024 1155291 1 T C - ReadM SNP 0007.scaffold00024 1155305 1 A T - ReadM SNP 0007.scaffold00024 1169359 1 G A - ReadM SNP 0007.scaffold00024 1169508 1 C T - ReadM SNP 0007.scaffold00024 1169572 1 A C - ReadM SNP 0007.scaffold00024 1170038 1 A G - ReadM SNP 0007.scaffold00024 1170436 1 T G - ReadM SNP 0007.scaffold00024 1171191 1 T C - ReadM SNP 0007.scaffold00024 1171559 1 A G - ReadM SNP 0007.scaffold00024 1171670 1 C A - ReadM SNP 0007.scaffold00024 1171748 1 T C - ReadM SNP 0007.scaffold00024 1173556 1 C T - ReadM SNP 0007.scaffold00024 1174098 1 A G - Both INDEL 0007.scaffold00024 1174931 1 A . scaffold41420 ReadM SNP 0007.scaffold00024 1175357 1 T C - ReadM SNP 0007.scaffold00024 1175943 1 A T - ReadM SNP 0007.scaffold00024 1175973 1 G C - Both SNP 0007.scaffold00024 1176292 1 T C scaffold41420 Both SNP 0007.scaffold00024 1176418 1 A G scaffold41420 ScafM SNP 0007.scaffold00024 1176531 1 T A scaffold41420 Both SNP 0007.scaffold00024 1176590 1 A T scaffold41420 Both SNP 0007.scaffold00024 1176705 1 G A scaffold41420 Both SNP 0007.scaffold00024 1176789 1 C T scaffold41420 ReadM SNP 0007.scaffold00024 1177169 1 T C - ReadM SNP 0007.scaffold00024 1177399 1 G A - ReadM SNP 0007.scaffold00024 1177510 1 A G - ReadM SNP 0007.scaffold00024 1177669 1 A G - ReadM SNP 0007.scaffold00024 1177744 1 C T - ReadM SNP 0007.scaffold00024 1177793 1 C T - Both SNP 0007.scaffold00024 1178821 1 T C scaffold41420 Both SNP 0007.scaffold00024 1178880 1 C T scaffold41420 ScafM INDEL 0007.scaffold00024 1179024 3 CCC ... scaffold41420 ScafM SNP 0007.scaffold00024 1179053 1 A G scaffold41420 Both SNP 0007.scaffold00024 1179251 1 A T scaffold41420 Both SNP 0007.scaffold00024 1179310 1 C A scaffold41420 Both SNP 0007.scaffold00024 1179481 1 G A scaffold41420 Both SNP 0007.scaffold00024 1179501 1 A C scaffold41420 ScafM INDEL 0007.scaffold00024 1179568 6 ...... TCCTTC scaffold41420 Both SNP 0007.scaffold00024 1179714 1 C T scaffold41420 Both SNP 0007.scaffold00024 1180193 1 C T scaffold41420 ReadM SNP 0007.scaffold00024 1180312 1 C T - ReadM SNP 0007.scaffold00024 1180456 1 C T - ReadM SNP 0007.scaffold00024 1180574 1 T G - ScafM SNP 0007.scaffold00024 1180707 2 GA AG scaffold41420 Both SNP 0007.scaffold00024 1180807 1 T G scaffold41420 ScafM SNP 0007.scaffold00024 1181129 1 C T scaffold41420 ScafM SNP 0007.scaffold00024 1181471 1 G A scaffold41420 Both SNP 0007.scaffold00024 1181991 1 C G scaffold41420 Both SNP 0007.scaffold00024 1182029 1 T G scaffold41420 ReadM SNP 0007.scaffold00024 1182106 1 A T - ReadM SNP 0007.scaffold00024 1182132 1 G C - ScafM SNP 0007.scaffold00024 1182261 1 G T scaffold41420 ScafM SNP 0007.scaffold00024 1182310 1 G A scaffold41420 Both SNP 0007.scaffold00024 1182392 1 A C scaffold41420 Both SNP 0007.scaffold00024 1182449 1 C T scaffold41420 Both INDEL 0007.scaffold00024 1182506 1 T . scaffold41420 ScafM SNP 0007.scaffold00024 1182579 1 C T scaffold41420 ScafM SNP 0007.scaffold00024 1188858 1 G A scaffold41420 Both SNP 0007.scaffold00024 1189862 1 G A scaffold41420 ScafM SNP 0007.scaffold00024 1189978 1 A G scaffold41420 ScafM INDEL 0007.scaffold00024 1190363 21 ..................... AAAATTCTAATGGTGGACAAG scaffold41420 ScafM INDEL 0007.scaffold00024 1190364 1 . T scaffold41420 Both SNP 0007.scaffold00024 1190818 1 G T scaffold41420 ScafM SNP 0007.scaffold00024 1191004 1 C G scaffold41420 ScafM SNP 0007.scaffold00024 1192076 1 G A scaffold41420 ReadM SNP 0007.scaffold00024 1192347 1 A C - ReadM SNP 0007.scaffold00024 1192355 1 A G - ReadM SNP 0007.scaffold00024 1193491 1 T G - ReadM SNP 0007.scaffold00024 1193530 1 A G - ReadM SNP 0007.scaffold00024 1193810 1 A G - ReadM SNP 0007.scaffold00024 1194484 1 G T - ReadM SNP 0007.scaffold00024 1194592 1 T A - ReadM SNP 0007.scaffold00024 1194907 1 A G - ReadM SNP 0007.scaffold00024 1195622 1 T A - ReadM SNP 0007.scaffold00024 1196059 1 A G - ScafM SNP 0007.scaffold00024 1196460 1 G A scaffold41420 ScafM SNP 0007.scaffold00024 1197043 1 C A scaffold41420 Both SNP 0007.scaffold00024 1197047 1 G A scaffold41420 Both SNP 0007.scaffold00024 1197050 1 T C scaffold41420 ScafM SNP 0007.scaffold00024 1197088 1 C A scaffold41420 Both SNP 0007.scaffold00024 1197287 1 A G scaffold41420 ScafM SNP 0007.scaffold00024 1197375 1 C T scaffold41420 ScafM INDEL 0007.scaffold00024 1197392 3 TTA ... scaffold41420 Both SNP 0007.scaffold00024 1197478 1 T C scaffold41420 ScafM SNP 0007.scaffold00024 1198329 1 A G scaffold41420 ScafM SNP 0007.scaffold00024 1198508 1 A G scaffold41420 ScafM INDEL 0007.scaffold00024 1198628 1 . A scaffold41420 Both SNP 0007.scaffold00024 1199023 1 T C scaffold41420 ScafM SNP 0007.scaffold00024 1199108 1 T C scaffold41420 ReadM SNP 0007.scaffold00024 1199620 1 G A - ReadM SNP 0007.scaffold00024 1199872 1 C T - ReadM SNP 0007.scaffold00024 1200310 1 T C - Both SNP 0007.scaffold00024 1200431 1 C T scaffold41420 ReadM SNP 0007.scaffold00024 1200484 1 C T - ReadM SNP 0007.scaffold00024 1202353 1 A G - ReadM SNP 0007.scaffold00024 1203277 1 G T - ReadM SNP 0007.scaffold00024 1203976 1 A T - ScafM SNP 0007.scaffold00024 1204479 1 C A scaffold4114 ScafM SNP 0007.scaffold00024 1204573 1 C T scaffold4114 Both SNP 0007.scaffold00024 1205030 1 A G scaffold4114 ScafM SNP 0007.scaffold00024 1205038 1 T C scaffold4114 ScafM SNP 0007.scaffold00024 1205070 1 A T scaffold4114 ScafM INDEL 0007.scaffold00024 1205259 1 A . scaffold4114 ReadM SNP 0007.scaffold00024 1205390 1 G A - Both SNP 0007.scaffold00024 1206082 1 C T scaffold4114 Both SNP 0007.scaffold00024 1206843 1 T G scaffold4114 ReadM SNP 0007.scaffold00024 1207129 1 T C - ReadM SNP 0007.scaffold00024 1207270 1 A T - ReadM SNP 0007.scaffold00024 1207319 1 C A - ReadM SNP 0007.scaffold00024 1207457 1 C T - Both SNP 0007.scaffold00024 1207561 1 T C scaffold4114 ReadM SNP 0007.scaffold00024 1207762 1 T C - ReadM SNP 0007.scaffold00024 1207974 1 A T - ReadM SNP 0007.scaffold00024 1208032 1 A T - ReadM SNP 0007.scaffold00024 1208140 1 C A - ScafM SNP 0007.scaffold00024 1209179 1 C T scaffold4114 ReadM SNP 0007.scaffold00024 1210483 1 T C - ReadM SNP 0007.scaffold00024 1210833 1 G T - ReadM SNP 0007.scaffold00024 1210885 1 G A - ReadM SNP 0007.scaffold00024 1211906 1 A T - ReadM SNP 0007.scaffold00024 1212082 1 G A - ReadM SNP 0007.scaffold00024 1212248 1 C T - ReadM SNP 0007.scaffold00024 1212281 1 T C - ReadM SNP 0007.scaffold00024 1212459 1 G T - ReadM SNP 0007.scaffold00024 1212505 1 G T - ReadM SNP 0007.scaffold00024 1212833 1 A C - ReadM SNP 0007.scaffold00024 1212936 1 A C - ReadM SNP 0007.scaffold00024 1213001 1 T C - ReadM SNP 0007.scaffold00024 1213108 1 A T - ReadM SNP 0007.scaffold00024 1213248 1 T G - ReadM SNP 0007.scaffold00024 1213380 1 T C - ReadM SNP 0007.scaffold00024 1213745 1 T C - ReadM SNP 0007.scaffold00024 1214041 1 C A - ReadM SNP 0007.scaffold00024 1214210 1 A G - ReadM SNP 0007.scaffold00024 1214300 1 C G - ReadM SNP 0007.scaffold00024 1214398 1 A G - ReadM SNP 0007.scaffold00024 1214471 1 G C - ReadM SNP 0007.scaffold00024 1214614 1 C T - ScafM SNP 0007.scaffold00024 1214800 1 A T scaffold4114 Both SNP 0007.scaffold00024 1214916 1 C G scaffold4114 ReadM SNP 0007.scaffold00024 1215016 1 T C - ReadM SNP 0007.scaffold00024 1215549 1 C G - ReadM SNP 0007.scaffold00024 1215602 1 T C - ScafM SNP 0007.scaffold00024 1215867 1 A G scaffold2830 Both SNP 0007.scaffold00024 1215871 1 A G scaffold2830 ScafM SNP 0007.scaffold00024 1215883 1 G T scaffold2830 ScafM SNP 0007.scaffold00024 1215888 1 G A scaffold2830 ScafM SNP 0007.scaffold00024 1215893 1 A C scaffold2830 ScafM SNP 0007.scaffold00024 1215901 1 A G scaffold2830 ScafM INDEL 0007.scaffold00024 1215902 2 .. TT scaffold2830 ScafM SNP 0007.scaffold00024 1215945 1 A C scaffold2830 ScafM SNP 0007.scaffold00024 1215947 1 A G scaffold2830 ScafM SNP 0007.scaffold00024 1215954 1 C T scaffold2830 ScafM SNP 0007.scaffold00024 1215961 1 C T scaffold2830 ScafM SNP 0007.scaffold00024 1215966 1 G A scaffold2830 ScafM SNP 0007.scaffold00024 1215974 1 C T scaffold2830 ScafM INDEL 0007.scaffold00024 1215983 1 . C scaffold2830 ScafM INDEL 0007.scaffold00024 1215989 1 G . scaffold2830 ScafM SNP 0007.scaffold00024 1215993 1 C T scaffold2830 ScafM SNP 0007.scaffold00024 1216004 2 CT TC scaffold2830 ScafM SNP 0007.scaffold00024 1216014 1 A G scaffold2830 ScafM SNP 0007.scaffold00024 1216060 1 G C scaffold2830 ScafM SNP 0007.scaffold00024 1216062 1 G A scaffold2830 ScafM SNP 0007.scaffold00024 1216070 1 G A scaffold2830 ReadM SNP 0007.scaffold00024 1216406 1 T C - ReadM SNP 0007.scaffold00024 1216459 1 C G - ReadM SNP 0007.scaffold00024 1218527 1 T A - Both SNP 0007.scaffold00024 1218939 1 C T scaffold48549 ReadM SNP 0007.scaffold00024 1220037 1 T G - ReadM SNP 0007.scaffold00024 1220307 1 T C - ReadM SNP 0007.scaffold00024 1220706 1 G A - ReadM SNP 0007.scaffold00024 1221008 1 A G - ReadM SNP 0007.scaffold00024 1221726 1 T C - ReadM SNP 0007.scaffold00024 1221834 1 A G - ReadM SNP 0007.scaffold00024 1221962 1 T G - ReadM SNP 0007.scaffold00024 1222421 1 G A - ReadM SNP 0007.scaffold00024 1222749 1 A G - ReadM SNP 0007.scaffold00024 1223555 1 A T - ReadM SNP 0007.scaffold00024 1223841 1 T A - ReadM SNP 0007.scaffold00024 1224548 1 T A - ReadM SNP 0007.scaffold00024 1224880 1 G C - Both SNP 0007.scaffold00024 1225394 1 C A scaffold35324 ReadM SNP 0007.scaffold00024 1225864 1 T C - ReadM SNP 0007.scaffold00024 1228807 1 G T - ReadM SNP 0007.scaffold00024 1229743 1 A T - ReadM INDEL 0007.scaffold00024 1229972 1 . A - ScafM INDEL 0007.scaffold00024 1229972 2 .G AA scaffold35324 ScafM SNP 0007.scaffold00024 1229978 1 T C scaffold35324 ReadM SNP 0007.scaffold00024 1230408 1 A G - ReadM SNP 0007.scaffold00024 1230720 1 C T - ReadM SNP 0007.scaffold00024 1231003 1 C T - ScafM SNP 0007.scaffold00024 1231361 1 T C scaffold35324 ReadM SNP 0007.scaffold00024 1231709 1 A G - ReadM SNP 0007.scaffold00024 1231759 1 T A - Both SNP 0007.scaffold00024 1232695 1 A G scaffold35324 ReadM SNP 0007.scaffold00024 1233246 1 T A - ScafM SNP 0007.scaffold00024 1233283 1 A T scaffold35324 ScafM SNP 0007.scaffold00024 1233958 1 A T scaffold35324 ScafM INDEL 0007.scaffold00024 1234000 1 T . scaffold35324 Both SNP 0007.scaffold00024 1234141 1 A G scaffold35324 ScafM INDEL 0007.scaffold00024 1234356 3 ... TAT scaffold35324 ScafM SNP 0007.scaffold00024 1234500 1 T C scaffold35324 ReadM SNP 0007.scaffold00024 1234595 1 G A - ScafM SNP 0007.scaffold00024 1234595 2 GT AC scaffold35324 ScafM SNP 0007.scaffold00024 1234614 1 A G scaffold35324 ScafM SNP 0007.scaffold00024 1234823 1 A T scaffold35324 ScafM SNP 0007.scaffold00024 1234880 1 G T scaffold35324 ScafM SNP 0007.scaffold00024 1235034 1 A T scaffold35324 ScafM SNP 0007.scaffold00024 1235055 1 T A scaffold35324 ScafM SNP 0007.scaffold00024 1235224 1 T C scaffold35324 ScafM SNP 0007.scaffold00024 1235302 1 T G scaffold35324 ScafM SNP 0007.scaffold00024 1235475 1 T G scaffold35324 ScafM INDEL 0007.scaffold00024 1235616 1 T . scaffold35324 ScafM SNP 0007.scaffold00024 1235700 1 T G scaffold35324 ScafM SNP 0007.scaffold00024 1235722 1 C G scaffold35324 ScafM SNP 0007.scaffold00024 1235724 1 C T scaffold35324 ScafM SNP 0007.scaffold00024 1235734 1 T C scaffold35324 ScafM SNP 0007.scaffold00024 1235867 1 C T scaffold35324 ReadM SNP 0007.scaffold00024 1238700 1 T C - ReadM SNP 0007.scaffold00024 1239943 1 A C - ReadM SNP 0007.scaffold00024 1240347 1 A G - ReadM SNP 0007.scaffold00024 1241540 1 A G - ReadM SNP 0007.scaffold00024 1241577 1 C T - ReadM SNP 0007.scaffold00024 1242224 1 G A - ReadM SNP 0007.scaffold00024 1242300 1 A T - ReadM SNP 0007.scaffold00024 1242502 1 A G - ReadM SNP 0007.scaffold00024 1242812 1 T C - ScafM SNP 0007.scaffold00024 1243149 1 C T scaffold32190 Both SNP 0007.scaffold00024 1243256 1 T C scaffold32190 ScafM SNP 0007.scaffold00024 1243718 1 G A scaffold32190 Both SNP 0007.scaffold00024 1243867 1 A C scaffold32190 ScafM SNP 0007.scaffold00024 1243921 1 C G scaffold32190 ReadM SNP 0007.scaffold00024 1244109 1 C A - ReadM SNP 0007.scaffold00024 1244184 1 A G - ReadM SNP 0007.scaffold00024 1246105 1 A G - ScafM INDEL 0007.scaffold00024 1246516 72 ........................................................................ AACAATCCATAGGATCAATATGAATATAATAGCCCCTATACAATCCATGCCATCTGCAACTGGAAAAAAAAA scaffold1332 ScafM SNP 0007.scaffold00024 1246563 1 C T scaffold1332 Both SNP 0007.scaffold00024 1247047 1 G A scaffold1332 Both SNP 0007.scaffold00024 1247324 1 A G scaffold1332 Both INDEL 0007.scaffold00024 1247460 1 . A scaffold1332 Both SNP 0007.scaffold00024 1247484 1 A G scaffold1332 ScafM SNP 0007.scaffold00024 1247694 1 C A scaffold1332 ScafM SNP 0007.scaffold00024 1247706 1 G T scaffold1332 ScafM INDEL 0007.scaffold00024 1247823 2 AA .. scaffold1332 ScafM INDEL 0007.scaffold00024 1248153 1 G . scaffold1332 Both SNP 0007.scaffold00024 1248652 1 T G scaffold1332 ScafM SNP 0007.scaffold00024 1248767 1 A T scaffold1332 ScafM SNP 0007.scaffold00024 1248874 1 C T scaffold1332 ScafM SNP 0007.scaffold00024 1249311 1 A T scaffold1332 ScafM SNP 0007.scaffold00024 1250503 1 T C scaffold1332 ScafM SNP 0007.scaffold00024 1250895 1 A T scaffold1332 ScafM SNP 0007.scaffold00024 1250984 1 T A scaffold1332 Both SNP 0007.scaffold00024 1251137 1 C T scaffold1332 Both SNP 0007.scaffold00024 1251233 1 G A scaffold1332 Both SNP 0007.scaffold00024 1251418 1 T C scaffold1332 ScafM SNP 0007.scaffold00024 1251456 1 C A scaffold1332 ScafM SNP 0007.scaffold00024 1251539 1 G A scaffold1332 ScafM SNP 0007.scaffold00024 1251840 1 C T scaffold1332 ScafM SNP 0007.scaffold00024 1252208 2 GA AG scaffold1332 Both SNP 0007.scaffold00024 1252227 1 C G scaffold1332 ScafM SNP 0007.scaffold00024 1252347 1 T A scaffold1332 Both SNP 0007.scaffold00024 1252436 1 A G scaffold1332 Both SNP 0007.scaffold00024 1252473 1 A C scaffold1332 Both SNP 0007.scaffold00024 1252766 1 T C scaffold1332 ScafM SNP 0007.scaffold00024 1253283 1 G A scaffold1332 Both SNP 0007.scaffold00024 1253290 1 C T scaffold1332 ScafM SNP 0007.scaffold00024 1253542 1 C T scaffold1332 ScafM SNP 0007.scaffold00024 1253602 1 T G scaffold1332 Both SNP 0007.scaffold00024 1253684 1 G C scaffold1332 ScafM SNP 0007.scaffold00024 1253771 1 C T scaffold1332 ScafM SNP 0007.scaffold00024 1253908 1 G C scaffold1332 ScafM SNP 0007.scaffold00024 1253912 1 T G scaffold1332 ReadM INDEL 0007.scaffold00024 1254245 1 . A - ReadM SNP 0007.scaffold00024 1256021 1 T C - ScafM INDEL 0007.scaffold00024 1256778 4 TTCA .... scaffold1332 ReadM SNP 0007.scaffold00024 1256888 1 T C - ReadM SNP 0007.scaffold00024 1260068 1 A T - Both SNP 0007.scaffold00024 1260245 1 A T scaffold1332 Both SNP 0007.scaffold00024 1260259 1 G T scaffold1332 Both SNP 0007.scaffold00024 1260398 1 C T scaffold1332 ReadM SNP 0007.scaffold00024 1260629 1 C T - ReadM SNP 0007.scaffold00024 1261040 1 T C - ReadM SNP 0007.scaffold00024 1261505 1 A C - ReadM SNP 0007.scaffold00024 1261718 1 G A - ReadM SNP 0007.scaffold00024 1261723 1 A T - ReadM SNP 0007.scaffold00024 1262186 1 A G - ReadM SNP 0007.scaffold00024 1262229 1 C G - ReadM SNP 0007.scaffold00024 1263726 1 T C - Both SNP 0007.scaffold00024 1263996 1 G A scaffold1332 ReadM SNP 0007.scaffold00024 1264439 1 T A - ReadM SNP 0007.scaffold00024 1264524 1 A G - ReadM SNP 0007.scaffold00024 1264559 1 A G - ReadM SNP 0007.scaffold00024 1264565 1 A C - ReadM SNP 0007.scaffold00024 1265636 1 A C - ReadM SNP 0007.scaffold00024 1266118 1 T C - ReadM SNP 0007.scaffold00024 1266918 1 G T - ReadM INDEL 0007.scaffold00024 1266969 2 .. 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T scaffold11070 ScafM SNP 0007.scaffold00024 1340550 1 T A scaffold11070 ScafM SNP 0007.scaffold00024 1340640 1 C T scaffold11070 ScafM SNP 0007.scaffold00024 1340653 1 A G scaffold11070 ScafM SNP 0007.scaffold00024 1340685 2 CC TT scaffold11070 ScafM SNP 0007.scaffold00024 1340703 1 G A scaffold11070 ScafM SNP 0007.scaffold00024 1340917 1 G A scaffold11070 ScafM SNP 0007.scaffold00024 1341025 1 A T scaffold11070 ScafM INDEL 0007.scaffold00024 1341130 11 ........... TAAACATTTTT scaffold11070 Both SNP 0007.scaffold00024 1341277 1 T A scaffold11070 Both INDEL 0007.scaffold00024 1341279 1 . 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G scaffold1007 ScafM SNP 0007.scaffold00024 1447583 1 A G scaffold1007 ScafM SNP 0007.scaffold00024 1450445 1 A G scaffold1007 ReadM INDEL 0007.scaffold00024 1452807 3 ... 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A scaffold1007 ScafM INDEL 0007.scaffold00024 1515924 1 A . scaffold1007 ScafM INDEL 0007.scaffold00024 1516026 1 T . scaffold1007 ReadM INDEL 0007.scaffold00024 1560317 1 . T - ReadM SNP 0007.scaffold00024 1567139 1 T C - ScafM SNP 0007.scaffold00024 1574571 1 T G scaffold1964 ScafM SNP 0007.scaffold00024 1574637 1 G T scaffold1964 ScafM SNP 0007.scaffold00024 1574944 1 T C scaffold1964 ScafM SNP 0007.scaffold00024 1578224 1 C T scaffold1964 ScafM SNP 0007.scaffold00024 1584110 1 A G scaffold1964 ScafM SNP 0007.scaffold00024 1590229 1 A C scaffold1964 ScafM SNP 0007.scaffold00024 1590264 1 C T scaffold1964 ScafM SNP 0007.scaffold00024 1593042 1 C T scaffold1964 ScafM SNP 0007.scaffold00024 1593044 1 C T scaffold1964 ScafM SNP 0007.scaffold00024 1595278 1 G A scaffold1964 ScafM SNP 0007.scaffold00024 1595281 1 A G scaffold1964 ScafM SNP 0007.scaffold00024 1595352 1 T G scaffold1964 ScafM SNP 0007.scaffold00024 1595878 1 T G scaffold1964 ScafM SNP 0007.scaffold00024 1596258 1 G A scaffold1964 ScafM SNP 0007.scaffold00024 1607375 1 C A scaffold1964 ScafM SNP 0007.scaffold00024 1607472 1 G A scaffold1964 ScafM SNP 0007.scaffold00024 1607553 1 C G scaffold1964 ScafM SNP 0007.scaffold00024 1607812 1 A G scaffold1964 ScafM SNP 0007.scaffold00024 1612413 1 G T scaffold1964 ScafM SNP 0007.scaffold00024 1613428 1 T C scaffold1964 ScafM SNP 0007.scaffold00024 1613434 1 T C scaffold1964 ScafM SNP 0007.scaffold00024 1617673 1 T C scaffold1964 ScafM SNP 0007.scaffold00024 1618821 1 G A scaffold2952 ScafM INDEL 0007.scaffold00024 1618876 1 . T scaffold2952 ScafM SNP 0007.scaffold00024 1622126 1 A T scaffold900 ScafM SNP 0007.scaffold00024 1622193 1 C A scaffold900 ScafM SNP 0007.scaffold00024 1622209 1 G A scaffold900 ScafM SNP 0007.scaffold00024 1622212 1 A G scaffold900 ScafM SNP 0007.scaffold00024 1622231 1 T A scaffold900 ScafM SNP 0007.scaffold00024 1629501 1 C A scaffold1147 ScafM INDEL 0007.scaffold00024 1629962 4 GGGG .... scaffold1147 ScafM SNP 0007.scaffold00024 1630041 1 C A scaffold1147 ScafM SNP 0007.scaffold00024 1630568 1 C A scaffold1147 ReadM SNP 0007.scaffold00024 1637867 1 T C - ScafM SNP 0007.scaffold00024 1639419 1 C T scaffold1147 ScafM SNP 0007.scaffold00024 1645552 1 G A scaffold1147 ReadM SNP 0007.scaffold00024 1659000 1 A G - ScafM INDEL 0007.scaffold00024 1667450 7 ....... AACAGAA scaffold1147 ScafM SNP 0007.scaffold00024 1671726 1 A T scaffold1147 ScafM SNP 0007.scaffold00024 1678005 1 T A scaffold1147 ScafM INDEL 0007.scaffold00024 1679014 2 .. TA scaffold1147 ScafM INDEL 0007.scaffold00024 1679073 1 T . scaffold1147 ScafM INDEL 0007.scaffold00024 1679075 1 . T scaffold1147 ScafM SNP 0007.scaffold00024 1680350 1 G T scaffold1147 ScafM SNP 0007.scaffold00024 1685550 1 A C scaffold1147 ScafM SNP 0007.scaffold00024 1701959 1 C T scaffold2562 ScafM INDEL 0007.scaffold00024 1702077 1 A . scaffold2562 ScafM SNP 0007.scaffold00024 1706054 1 T A scaffold2562 ScafM SNP 0007.scaffold00024 1706059 1 G T scaffold2562 ScafM SNP 0007.scaffold00024 1706061 1 A C scaffold2562 ScafM SNP 0007.scaffold00024 1706089 1 A G scaffold2562 ScafM SNP 0007.scaffold00024 1706129 1 G T scaffold2562 ScafM SNP 0007.scaffold00024 1706133 1 G A scaffold2562 ScafM SNP 0007.scaffold00024 1706136 1 G A scaffold2562 ScafM SNP 0007.scaffold00024 1706150 1 G A scaffold2562 ScafM SNP 0007.scaffold00024 1706152 1 C T scaffold2562 ScafM SNP 0007.scaffold00024 1706181 1 A T scaffold2562 ScafM SNP 0007.scaffold00024 1706188 1 T C scaffold2562 ScafM SNP 0007.scaffold00024 1708680 1 T A scaffold2562 ScafM SNP 0007.scaffold00024 1710454 1 T C scaffold2562 ScafM SNP 0007.scaffold00024 1712493 1 T G scaffold2562 ScafM SNP 0007.scaffold00024 1712545 1 T G scaffold2562 ScafM INDEL 0007.scaffold00024 1712761 1 . A scaffold2562 ScafM SNP 0007.scaffold00024 1719861 1 G A scaffold2562 ScafM INDEL 0007.scaffold00024 1720608 4 TTTT .... scaffold2562 ScafM SNP 0007.scaffold00024 1720613 1 T A scaffold2562 ScafM SNP 0007.scaffold00024 1720643 1 C T scaffold2562 ScafM SNP 0007.scaffold00024 1724774 1 G A scaffold266 ScafM SNP 0007.scaffold00024 1724777 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1724795 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1724875 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1724898 1 G A scaffold266 ScafM SNP 0007.scaffold00024 1724953 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1724990 1 A G scaffold266 ScafM SNP 0007.scaffold00024 1725010 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1725019 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725104 1 G A scaffold266 ScafM SNP 0007.scaffold00024 1725121 1 C A scaffold266 ScafM SNP 0007.scaffold00024 1725149 1 G C scaffold266 ScafM SNP 0007.scaffold00024 1725160 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725171 1 G A scaffold266 ScafM SNP 0007.scaffold00024 1725216 1 A T scaffold266 ScafM SNP 0007.scaffold00024 1725218 1 G A scaffold266 ScafM SNP 0007.scaffold00024 1725220 1 A G scaffold266 ScafM SNP 0007.scaffold00024 1725256 1 T A scaffold266 ScafM SNP 0007.scaffold00024 1725282 2 CC AT scaffold266 ScafM SNP 0007.scaffold00024 1725311 1 A G scaffold266 ScafM SNP 0007.scaffold00024 1725318 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725329 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725350 1 A G scaffold266 ScafM SNP 0007.scaffold00024 1725379 1 T C scaffold266 ScafM SNP 0007.scaffold00024 1725417 1 T A scaffold266 ScafM SNP 0007.scaffold00024 1725427 1 G A scaffold266 ScafM INDEL 0007.scaffold00024 1725432 1 . T scaffold266 ScafM SNP 0007.scaffold00024 1725454 1 C G scaffold266 ScafM SNP 0007.scaffold00024 1725456 1 A G scaffold266 ScafM SNP 0007.scaffold00024 1725477 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725482 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725493 2 TA GG scaffold266 ScafM SNP 0007.scaffold00024 1725503 1 A T scaffold266 ScafM SNP 0007.scaffold00024 1725507 1 A T scaffold266 ScafM SNP 0007.scaffold00024 1725523 1 C A scaffold266 ScafM INDEL 0007.scaffold00024 1725557 1 T . scaffold266 ScafM SNP 0007.scaffold00024 1725569 1 C T scaffold266 ScafM SNP 0007.scaffold00024 1725590 1 T C scaffold266 ReadM INDEL 0007.scaffold00024 1728732 1 . A - ScafM INDEL 0007.scaffold00024 1733335 1 . T scaffold7234 ReadM SNP 0007.scaffold00024 1737902 1 A C - ScafM INDEL 0007.scaffold00024 1752077 14 .............. TGAAATTTCTGTTA scaffold709 ScafM INDEL 0007.scaffold00024 1752148 1 . G scaffold709 ScafM SNP 0007.scaffold00024 1752150 1 A G scaffold709 ScafM SNP 0007.scaffold00024 1752156 1 G T scaffold709 ReadM INDEL 0007.scaffold00024 1759351 1 . A - ScafM SNP 0007.scaffold00024 1765382 1 A T scaffold12275 ScafM SNP 0007.scaffold00024 1768350 1 A G scaffold4061 ScafM SNP 0007.scaffold00024 1790168 1 G T scaffold5135 ScafM SNP 0007.scaffold00024 1791931 1 G C scaffold5135 ScafM SNP 0007.scaffold00024 1792148 1 T A scaffold5135 ScafM SNP 0007.scaffold00024 1792189 1 A G scaffold5135 ScafM SNP 0007.scaffold00024 1792260 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1792650 1 A T scaffold5135 ScafM SNP 0007.scaffold00024 1792674 1 G A scaffold5135 ScafM SNP 0007.scaffold00024 1792709 1 T C scaffold5135 ScafM SNP 0007.scaffold00024 1792740 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1792769 1 T C scaffold5135 ScafM SNP 0007.scaffold00024 1792773 1 G C scaffold5135 ScafM SNP 0007.scaffold00024 1793053 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1793056 1 T C scaffold5135 ScafM SNP 0007.scaffold00024 1793070 1 A G scaffold5135 ScafM INDEL 0007.scaffold00024 1793072 1 . A scaffold5135 ScafM SNP 0007.scaffold00024 1793097 1 T G scaffold5135 ScafM SNP 0007.scaffold00024 1793101 1 A G scaffold5135 ScafM SNP 0007.scaffold00024 1793104 1 G T scaffold5135 ScafM SNP 0007.scaffold00024 1793126 1 A T scaffold5135 ScafM SNP 0007.scaffold00024 1793169 1 A T scaffold5135 ScafM SNP 0007.scaffold00024 1793175 1 T G scaffold5135 ScafM INDEL 0007.scaffold00024 1793182 5 ..... TGTTC scaffold5135 ScafM SNP 0007.scaffold00024 1793568 1 C A scaffold5135 ScafM SNP 0007.scaffold00024 1793661 1 A G scaffold5135 ScafM SNP 0007.scaffold00024 1793673 1 T G scaffold5135 ScafM SNP 0007.scaffold00024 1793690 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1793741 1 A T scaffold5135 ScafM SNP 0007.scaffold00024 1793744 1 G C scaffold5135 ScafM SNP 0007.scaffold00024 1793818 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1794310 1 T C scaffold5135 ScafM SNP 0007.scaffold00024 1795546 1 G T scaffold5135 ScafM SNP 0007.scaffold00024 1795974 1 T C scaffold5135 ScafM SNP 0007.scaffold00024 1796086 1 A G scaffold5135 ScafM SNP 0007.scaffold00024 1796482 1 C T scaffold5135 ScafM SNP 0007.scaffold00024 1796497 1 T C scaffold5135 ScafM INDEL 0007.scaffold00024 1797045 23 ....................... CACGCAAACTTTTGCTTGGTTTC scaffold5135 ScafM SNP 0007.scaffold00024 1798958 1 A C scaffold5135 ScafM SNP 0007.scaffold00024 1800097 1 T A scaffold5135 ScafM SNP 0007.scaffold00024 1803456 1 G A scaffold5135 ReadM INDEL 0007.scaffold00024 1815362 1 . T - ScafM SNP 0007.scaffold00024 1820640 1 C A scaffold10410 ScafM INDEL 0007.scaffold00024 1840360 1 . T scaffold10410 ScafM INDEL 0007.scaffold00024 1841868 1 . A scaffold10410 ScafM SNP 0007.scaffold00024 1842723 1 T C scaffold10410 ScafM INDEL 0007.scaffold00024 1843594 1 . A scaffold10410 ScafM SNP 0007.scaffold00024 1873482 1 G A scaffold5596 ScafM SNP 0007.scaffold00024 1873988 1 G A scaffold5596 ScafM SNP 0007.scaffold00024 1878984 2 AA GG scaffold539 ScafM SNP 0007.scaffold00024 1878993 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1879003 1 A T scaffold539 ScafM SNP 0007.scaffold00024 1879013 2 AG GA scaffold539 ScafM INDEL 0007.scaffold00024 1879026 1 . T scaffold539 ScafM SNP 0007.scaffold00024 1879032 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1879046 1 A T scaffold539 ScafM SNP 0007.scaffold00024 1879068 1 A G scaffold539 ScafM SNP 0007.scaffold00024 1879084 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1879111 2 CT TC scaffold539 ScafM INDEL 0007.scaffold00024 1879136 5 ..... CAAAA scaffold539 ScafM INDEL 0007.scaffold00024 1879144 2 .. GC scaffold539 ScafM SNP 0007.scaffold00024 1879156 1 C A scaffold539 ScafM SNP 0007.scaffold00024 1879179 1 G T scaffold539 ScafM SNP 0007.scaffold00024 1879210 1 T A scaffold539 ScafM SNP 0007.scaffold00024 1879227 2 TG CA scaffold539 ScafM SNP 0007.scaffold00024 1879254 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879261 1 A C scaffold539 ScafM SNP 0007.scaffold00024 1879277 1 T G scaffold539 ScafM SNP 0007.scaffold00024 1879294 1 T G scaffold539 ScafM SNP 0007.scaffold00024 1879355 2 AA GT scaffold539 ScafM SNP 0007.scaffold00024 1879358 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879384 1 T C scaffold539 ScafM SNP 0007.scaffold00024 1879388 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1879457 1 T C scaffold539 ScafM SNP 0007.scaffold00024 1879466 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1879513 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879518 3 TGT CAC scaffold539 ScafM SNP 0007.scaffold00024 1879534 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879564 1 A T scaffold539 ScafM INDEL 0007.scaffold00024 1879584 1 C . scaffold539 ScafM SNP 0007.scaffold00024 1879588 1 C A scaffold539 ScafM SNP 0007.scaffold00024 1879599 1 A C scaffold539 ScafM INDEL 0007.scaffold00024 1879722 1 . A scaffold539 ScafM SNP 0007.scaffold00024 1879782 1 G T scaffold539 ScafM SNP 0007.scaffold00024 1879787 1 A C scaffold539 ScafM INDEL 0007.scaffold00024 1879817 1 . A scaffold539 ScafM SNP 0007.scaffold00024 1879822 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879827 1 T A scaffold539 ScafM SNP 0007.scaffold00024 1879848 1 C A scaffold539 ScafM SNP 0007.scaffold00024 1879863 1 C A scaffold539 ScafM SNP 0007.scaffold00024 1879874 1 A T scaffold539 ScafM SNP 0007.scaffold00024 1879879 1 C T scaffold539 ScafM INDEL 0007.scaffold00024 1879891 3 GAT ... scaffold539 ScafM SNP 0007.scaffold00024 1879897 1 A G scaffold539 ScafM SNP 0007.scaffold00024 1879899 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879905 1 A G scaffold539 ScafM SNP 0007.scaffold00024 1879911 1 A G scaffold539 ScafM SNP 0007.scaffold00024 1879914 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1879923 1 T C scaffold539 ScafM SNP 0007.scaffold00024 1879995 1 C T scaffold539 ScafM SNP 0007.scaffold00024 1880016 1 T A scaffold539 ScafM SNP 0007.scaffold00024 1880032 1 A G scaffold539 ScafM SNP 0007.scaffold00024 1880039 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1880089 1 G T scaffold539 ScafM SNP 0007.scaffold00024 1880116 1 T G scaffold539 ScafM SNP 0007.scaffold00024 1880133 1 G A scaffold539 ScafM SNP 0007.scaffold00024 1882482 1 T C scaffold5596 ScafM SNP 0007.scaffold00024 1882649 1 C A scaffold5596 ScafM INDEL 0007.scaffold00024 1886451 1 . G scaffold5596 ScafM INDEL 0007.scaffold00024 1886645 1 . T scaffold5596 ScafM SNP 0007.scaffold00024 1899665 1 G A scaffold5596 ScafM INDEL 0007.scaffold00024 1899693 1 . T scaffold5596 ScafM SNP 0007.scaffold00024 1903085 1 A T scaffold5596 ScafM SNP 0007.scaffold00024 1903714 1 G A scaffold5596 ScafM INDEL 0007.scaffold00024 1905539 1 . T scaffold5596 ScafM INDEL 0007.scaffold00024 1907337 20 AGTTGTAATTCCAAGGTACA .................... scaffold5596 ReadM SNP 0007.scaffold00024 1910619 1 A G - ScafM INDEL 0007.scaffold00024 1911109 2 .. AA scaffold5596 ScafM INDEL 0007.scaffold00024 1911130 1 . T scaffold5596 ScafM SNP 0007.scaffold00024 1922546 1 A T scaffold849 ScafM SNP 0007.scaffold00024 1922550 1 G A scaffold849 ScafM SNP 0007.scaffold00024 1922555 1 A G scaffold849 ScafM SNP 0007.scaffold00024 1922571 2 CC TT scaffold849 ScafM SNP 0007.scaffold00024 1922593 1 C T scaffold849 ScafM SNP 0007.scaffold00024 1922920 1 A T scaffold32718 ScafM SNP 0007.scaffold00024 1923079 1 A G scaffold32718 ScafM SNP 0007.scaffold00024 1923096 1 A T scaffold32718 ScafM INDEL 0007.scaffold00024 1923127 1 C . scaffold32718 ScafM SNP 0007.scaffold00024 1923132 1 G A scaffold32718 ScafM SNP 0007.scaffold00024 1923134 1 T C scaffold32718 ScafM SNP 0007.scaffold00024 1923157 1 T G scaffold32718 ScafM SNP 0007.scaffold00024 1923162 1 G A scaffold32718 ScafM INDEL 0007.scaffold00024 1923172 1 T . scaffold32718 ScafM SNP 0007.scaffold00024 1923177 1 C T scaffold32718 ScafM INDEL 0007.scaffold00024 1923215 9 TAACAAATA ......... scaffold32718 ScafM SNP 0007.scaffold00024 1923232 1 T G scaffold32718 ScafM SNP 0007.scaffold00024 1923839 1 T C scaffold1881 ScafM INDEL 0007.scaffold00024 1924065 1 . A scaffold1881 ScafM SNP 0007.scaffold00024 1924942 1 A T scaffold8293 ScafM SNP 0007.scaffold00024 1924944 1 G C scaffold8293 ScafM SNP 0007.scaffold00024 1924961 1 G T scaffold8293 ScafM SNP 0007.scaffold00024 1924977 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1925000 1 T A scaffold8293 ScafM SNP 0007.scaffold00024 1925029 1 T C scaffold8293 ScafM SNP 0007.scaffold00024 1925125 2 TT CA scaffold8293 ScafM SNP 0007.scaffold00024 1925297 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1925468 1 A G scaffold8293 ScafM SNP 0007.scaffold00024 1925520 1 T G scaffold8293 ScafM SNP 0007.scaffold00024 1925543 2 CA TC scaffold8293 ScafM SNP 0007.scaffold00024 1925657 1 A G scaffold8293 ScafM SNP 0007.scaffold00024 1925673 1 G T scaffold8293 ScafM SNP 0007.scaffold00024 1925689 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1925708 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1925756 1 A T scaffold8293 ScafM SNP 0007.scaffold00024 1925765 1 A C scaffold8293 ScafM SNP 0007.scaffold00024 1925776 1 C G scaffold8293 ScafM SNP 0007.scaffold00024 1925833 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1925908 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1925985 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1926038 1 A C scaffold8293 ScafM SNP 0007.scaffold00024 1926103 1 T G scaffold8293 ScafM SNP 0007.scaffold00024 1926131 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1926223 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1926265 1 G A scaffold8293 ScafM SNP 0007.scaffold00024 1926267 1 A G scaffold8293 ScafM SNP 0007.scaffold00024 1926389 1 C G scaffold8293 ScafM SNP 0007.scaffold00024 1926411 1 A G scaffold8293 ScafM SNP 0007.scaffold00024 1926448 1 G T scaffold8293 ScafM INDEL 0007.scaffold00024 1926462 2 AA .. scaffold8293 ScafM SNP 0007.scaffold00024 1926572 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1926601 1 T A scaffold8293 ScafM SNP 0007.scaffold00024 1926677 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1926767 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1926857 1 A G scaffold8293 ScafM INDEL 0007.scaffold00024 1932770 9 ATTAATGTT ......... scaffold8293 ScafM SNP 0007.scaffold00024 1933203 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1955739 1 C T scaffold8293 ScafM SNP 0007.scaffold00024 1956381 1 T G scaffold8293 ScafM SNP 0007.scaffold00024 1958790 1 T C scaffold8293 ScafM SNP 0007.scaffold00024 1963799 1 A T scaffold8293 ScafM SNP 0007.scaffold00024 1979543 1 T C scaffold959 ScafM SNP 0007.scaffold00024 1979562 1 G C scaffold959 ScafM INDEL 0007.scaffold00024 1979617 11 ........... ACAACACTTCG scaffold959 ReadM SNP 0007.scaffold00024 1982200 1 C T - ScafM SNP 0007.scaffold00024 1989270 1 A T scaffold959 ScafM INDEL 0007.scaffold00024 1989431 9 ......... CTTCTTCTT scaffold959 ScafM INDEL 0007.scaffold00024 1991838 32 TCCCACTTAGGAACTCTCCCACTTAGGAACTC ................................ scaffold959 ScafM INDEL 0007.scaffold00024 1992167 56 ........................................................ CTTGTTCTATGTTAATGTAATATGCACATTTCAAATAGAGATGTTAGTTAGATAAT scaffold959 ScafM SNP 0007.scaffold00024 1996131 1 C T scaffold959 ScafM SNP 0007.scaffold00024 1997417 1 A C scaffold959 ScafM SNP 0007.scaffold00024 2000674 1 G T scaffold959 ScafM SNP 0007.scaffold00024 2002044 1 C A scaffold959 ScafM INDEL 0007.scaffold00024 2002755 1 G . scaffold959 ScafM INDEL 0007.scaffold00024 2003906 1 . T scaffold959 ScafM SNP 0008.scaffold00029 8 1 T C scaffold7392 ScafM SNP 0008.scaffold00029 59 1 G A scaffold7392 ScafM SNP 0008.scaffold00029 124 1 T G scaffold7392 ScafM SNP 0008.scaffold00029 216 1 T A scaffold7392 ScafM INDEL 0008.scaffold00029 254 4 .... TGCA scaffold7392 ScafM SNP 0008.scaffold00029 263 1 T C scaffold7392 ScafM SNP 0008.scaffold00029 275 1 G A scaffold7392 ScafM SNP 0008.scaffold00029 450 1 G A scaffold7392 ScafM SNP 0008.scaffold00029 495 1 C A scaffold7392 ScafM SNP 0008.scaffold00029 511 1 C T scaffold7392 ScafM SNP 0008.scaffold00029 851 1 C T scaffold1904 ScafM INDEL 0008.scaffold00029 854 2 .. TC scaffold1904 ScafM SNP 0008.scaffold00029 903 1 G A scaffold1904 ScafM SNP 0008.scaffold00029 910 1 A G scaffold1904 ScafM SNP 0008.scaffold00029 925 1 A G scaffold1904 ScafM SNP 0008.scaffold00029 943 1 A C scaffold1904 ScafM INDEL 0008.scaffold00029 15688 1 T . scaffold26439 ReadM SNP 0008.scaffold00029 16688 1 T G - ScafM INDEL 0008.scaffold00029 18461 34 GGATATAAAACAACATAAAGCTCGAAGTTTCCCT .................................. scaffold26439 ScafM INDEL 0008.scaffold00029 18496 3 TCC ... scaffold26439 ScafM SNP 0008.scaffold00029 21313 1 C A scaffold26439 ScafM INDEL 0008.scaffold00029 21366 1 . G scaffold26439 Both SNP 0008.scaffold00029 56175 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 56259 2 AT TC scaffold7854 ScafM INDEL 0008.scaffold00029 56400 12 ATGCAAATTAAA ............ scaffold7854 ScafM INDEL 0008.scaffold00029 56760 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 56833 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 56855 5 TGATC ..... scaffold7854 ScafM SNP 0008.scaffold00029 56881 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 57945 1 . G scaffold7854 ScafM INDEL 0008.scaffold00029 57947 2 .. TC scaffold7854 ScafM INDEL 0008.scaffold00029 57948 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 57957 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 57963 2 AC .. scaffold7854 ScafM SNP 0008.scaffold00029 57969 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 57983 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 57985 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 58002 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 58006 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 58032 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 58036 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 58041 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 58054 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 58077 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 58086 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 58097 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 58119 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 58124 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 58159 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 58163 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 58447 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 58455 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 58462 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 58464 1 A G scaffold7854 Both SNP 0008.scaffold00029 58478 1 G A scaffold7854 Both SNP 0008.scaffold00029 58573 1 A G scaffold7854 Both SNP 0008.scaffold00029 58585 1 T C scaffold7854 Both SNP 0008.scaffold00029 58594 1 A C scaffold7854 Both SNP 0008.scaffold00029 58636 1 A G scaffold7854 Both INDEL 0008.scaffold00029 58681 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 58713 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 58725 12 CACTAACAACAC ............ scaffold7854 Both SNP 0008.scaffold00029 58751 1 T C scaffold7854 Both INDEL 0008.scaffold00029 58858 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 58876 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 58878 1 T . scaffold7854 ScafM INDEL 0008.scaffold00029 58893 1 T . scaffold7854 Both SNP 0008.scaffold00029 58921 1 A T scaffold7854 Both SNP 0008.scaffold00029 58936 1 A G scaffold7854 Both SNP 0008.scaffold00029 59029 1 C T scaffold7854 Both INDEL 0008.scaffold00029 59049 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 59144 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 59146 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 59149 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 59156 1 T G scaffold7854 Both SNP 0008.scaffold00029 59179 1 A T scaffold7854 Both SNP 0008.scaffold00029 59240 1 C A scaffold7854 Both SNP 0008.scaffold00029 59244 1 C T scaffold7854 Both SNP 0008.scaffold00029 59273 1 G A scaffold7854 Both SNP 0008.scaffold00029 59316 1 A G scaffold7854 Both SNP 0008.scaffold00029 59456 1 G C scaffold7854 Both SNP 0008.scaffold00029 59488 1 A T scaffold7854 Both SNP 0008.scaffold00029 59514 1 A G scaffold7854 Both SNP 0008.scaffold00029 59777 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 60317 9 ......... GACGGAATA scaffold7854 Both SNP 0008.scaffold00029 60339 1 C A scaffold7854 Both SNP 0008.scaffold00029 60363 1 C T scaffold7854 Both INDEL 0008.scaffold00029 60453 1 A . scaffold7854 Both SNP 0008.scaffold00029 60503 1 T C scaffold7854 Both SNP 0008.scaffold00029 60573 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 60773 2 TA GT scaffold7854 ScafM SNP 0008.scaffold00029 60776 1 A T scaffold7854 Both SNP 0008.scaffold00029 60856 1 G T scaffold7854 Both SNP 0008.scaffold00029 60867 1 C T scaffold7854 Both SNP 0008.scaffold00029 60988 1 T C scaffold7854 Both SNP 0008.scaffold00029 61139 2 CA TG scaffold7854 ScafM SNP 0008.scaffold00029 61285 1 A T scaffold7854 ReadM SNP 0008.scaffold00029 61431 1 C T - Both SNP 0008.scaffold00029 61460 1 G T scaffold7854 Both SNP 0008.scaffold00029 62219 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 62357 1 A G - ScafM SNP 0008.scaffold00029 63031 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 63036 3 CCC TTT scaffold7854 ScafM SNP 0008.scaffold00029 63107 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 63168 1 T C scaffold7854 Both SNP 0008.scaffold00029 63286 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 63384 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 63575 1 C G scaffold7854 Both SNP 0008.scaffold00029 63650 1 A G scaffold7854 Both SNP 0008.scaffold00029 63669 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 64111 1 A G scaffold7854 Both SNP 0008.scaffold00029 64214 1 A G scaffold7854 Both SNP 0008.scaffold00029 64415 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 64440 1 C T scaffold7854 Both SNP 0008.scaffold00029 64453 1 A T scaffold7854 Both SNP 0008.scaffold00029 64616 1 T C scaffold7854 Both SNP 0008.scaffold00029 64654 1 G A scaffold7854 Both SNP 0008.scaffold00029 64825 1 A T scaffold7854 Both SNP 0008.scaffold00029 64838 1 G A scaffold7854 Both SNP 0008.scaffold00029 64855 1 C T scaffold7854 Both SNP 0008.scaffold00029 64871 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 64951 1 G T scaffold7854 ScafM INDEL 0008.scaffold00029 64952 4 .... ACCA scaffold7854 Both SNP 0008.scaffold00029 65070 1 A G scaffold7854 Both SNP 0008.scaffold00029 65238 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 65260 1 C T scaffold7854 Both SNP 0008.scaffold00029 65385 1 C T scaffold7854 Both INDEL 0008.scaffold00029 65389 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 65398 1 G T scaffold7854 Both SNP 0008.scaffold00029 65651 1 C T scaffold7854 Both SNP 0008.scaffold00029 65676 1 T C scaffold7854 Both SNP 0008.scaffold00029 65765 1 T C scaffold7854 Both SNP 0008.scaffold00029 65784 2 AA TT scaffold7854 Both SNP 0008.scaffold00029 65943 1 A G scaffold7854 Both INDEL 0008.scaffold00029 66184 1 G . scaffold7854 Both SNP 0008.scaffold00029 66199 1 A C scaffold7854 Both SNP 0008.scaffold00029 66223 1 C A scaffold7854 Both SNP 0008.scaffold00029 66273 1 T C scaffold7854 Both INDEL 0008.scaffold00029 66306 2 .. TG scaffold7854 Both SNP 0008.scaffold00029 66423 2 AT GC scaffold7854 Both SNP 0008.scaffold00029 66507 1 G T scaffold7854 Both SNP 0008.scaffold00029 66870 1 T C scaffold7854 Both SNP 0008.scaffold00029 66876 1 A G scaffold7854 Both INDEL 0008.scaffold00029 67299 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 67303 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 67314 1 G C scaffold7854 ScafM INDEL 0008.scaffold00029 67325 7 GCTATCA ....... scaffold7854 Both SNP 0008.scaffold00029 67498 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 67538 2 GT TA scaffold7854 Both SNP 0008.scaffold00029 67572 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 67616 1 A T - ReadM INDEL 0008.scaffold00029 67706 1 . T - ReadM SNP 0008.scaffold00029 67800 1 T C - ReadM SNP 0008.scaffold00029 67809 1 A T - Both SNP 0008.scaffold00029 67873 1 C T scaffold7854 Both SNP 0008.scaffold00029 67901 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 67940 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 67944 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 67962 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 67988 1 T G scaffold7854 ReadM SNP 0008.scaffold00029 68050 1 C T - ReadM SNP 0008.scaffold00029 68082 1 T C - ReadM SNP 0008.scaffold00029 68212 1 C T - ScafM SNP 0008.scaffold00029 69257 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 69360 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 69450 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 69680 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 69685 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 69695 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 69713 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 69751 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 69766 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 69768 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 69796 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 70102 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 70121 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 70125 5 GTTTT ..... scaffold7854 ScafM SNP 0008.scaffold00029 70134 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 70137 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 70139 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 70143 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 70160 5 ATTGC ..... scaffold7854 ScafM INDEL 0008.scaffold00029 70166 3 GGC ... scaffold7854 ScafM SNP 0008.scaffold00029 70175 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 70227 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 70233 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 70270 1 G T scaffold7854 Both SNP 0008.scaffold00029 70301 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 70347 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 70448 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 70452 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 70467 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 70480 2 .. TT scaffold7854 ScafM SNP 0008.scaffold00029 70483 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 70492 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 70495 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 70506 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 70508 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 70529 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 71330 2 AC .. scaffold7854 ScafM SNP 0008.scaffold00029 71354 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 71358 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 71389 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 71479 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 71525 7 ....... ACGAGTC scaffold7854 ScafM SNP 0008.scaffold00029 71553 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 71564 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 71601 4 .... AAAA scaffold7854 ScafM SNP 0008.scaffold00029 71602 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 71607 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 71642 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 71644 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 71658 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 71667 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 71682 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 71701 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 71718 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 71731 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 71741 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 71747 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 72288 1 C T - ReadM INDEL 0008.scaffold00029 72344 1 A . - ScafM SNP 0008.scaffold00029 74414 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 74424 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 74469 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 74502 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 74591 4 TCCT ATTG scaffold7854 ScafM SNP 0008.scaffold00029 74653 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 74658 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 74665 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 74682 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 74688 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 74700 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 74710 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 74733 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 74745 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 74795 8 ATTGCTAG ........ scaffold7854 ScafM SNP 0008.scaffold00029 75024 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 75027 2 .C AA scaffold7854 ScafM SNP 0008.scaffold00029 75031 3 CTA AGT scaffold7854 ScafM INDEL 0008.scaffold00029 75034 3 ... GGG scaffold7854 ScafM SNP 0008.scaffold00029 75036 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 75038 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 75055 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 75087 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 75095 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 75110 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 75113 2 AA GG scaffold7854 ScafM INDEL 0008.scaffold00029 75144 4 .... AGTC scaffold7854 ScafM SNP 0008.scaffold00029 75178 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 75182 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 75184 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 75203 4 .... TTAA scaffold7854 ScafM SNP 0008.scaffold00029 75211 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 75222 1 G . scaffold7854 ScafM SNP 0008.scaffold00029 75232 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 75259 15 ............... ATTCTCCATCTGAAC scaffold7854 Both INDEL 0008.scaffold00029 75423 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 75558 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 75612 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 75680 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 75683 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 75687 2 .. GG scaffold7854 ScafM SNP 0008.scaffold00029 75709 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 75718 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 75722 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 75737 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 75746 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 75754 2 AT GC scaffold7854 ScafM SNP 0008.scaffold00029 75778 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 75780 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 75788 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 75815 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 75823 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 75826 1 G A scaffold7854 Both SNP 0008.scaffold00029 75861 1 T G scaffold7854 Both SNP 0008.scaffold00029 75876 1 T C scaffold7854 Both SNP 0008.scaffold00029 75899 1 A C scaffold7854 Both SNP 0008.scaffold00029 75969 1 G T scaffold7854 Both SNP 0008.scaffold00029 75992 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76014 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76019 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76065 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76083 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76091 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 76102 6 ...... CACAGA scaffold7854 ScafM SNP 0008.scaffold00029 76113 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 76202 2 TC GA scaffold7854 ScafM SNP 0008.scaffold00029 76207 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 76211 2 .. TA scaffold7854 ScafM SNP 0008.scaffold00029 76223 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 76262 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 76272 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 76275 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 76294 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76297 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76306 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 76316 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 76321 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 76337 1 G . scaffold7854 ScafM INDEL 0008.scaffold00029 76340 3 TCG ... scaffold7854 ScafM SNP 0008.scaffold00029 76349 1 G C scaffold7854 ScafM INDEL 0008.scaffold00029 76351 3 ... CTG scaffold7854 ScafM SNP 0008.scaffold00029 76355 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 76365 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 76404 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 76410 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76413 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 76418 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 76473 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 76475 1 G T scaffold7854 Both SNP 0008.scaffold00029 76483 1 T A scaffold7854 Both SNP 0008.scaffold00029 76544 1 A G scaffold7854 Both SNP 0008.scaffold00029 76570 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76586 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 76593 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76649 2 AG GA scaffold7854 ScafM SNP 0008.scaffold00029 76681 2 TG CA scaffold7854 ScafM SNP 0008.scaffold00029 76685 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76700 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76719 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76738 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76784 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76797 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76812 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 76828 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 76834 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 76884 2 TC AA scaffold7854 ScafM SNP 0008.scaffold00029 76892 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76911 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 76952 8 ACTGTGAA ........ scaffold7854 ScafM SNP 0008.scaffold00029 76970 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 76984 2 TG CT scaffold7854 ScafM SNP 0008.scaffold00029 77056 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 77058 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 77121 2 AT TC scaffold7854 ScafM INDEL 0008.scaffold00029 77126 6 ...... TTTTTT scaffold7854 ScafM SNP 0008.scaffold00029 77127 7 AAAAACA TTTTTTT scaffold7854 ScafM SNP 0008.scaffold00029 77158 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 77196 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 77209 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 77217 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 77240 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 77272 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 77318 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 77329 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 77368 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 77384 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 77410 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 77454 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 77464 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 79027 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 79030 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 79048 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 79052 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 79057 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 79073 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 79086 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 79096 1 . C scaffold7854 ScafM SNP 0008.scaffold00029 79124 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 79126 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 79191 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 79198 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 79203 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 79235 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 79240 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 79266 2 CA AG scaffold7854 ScafM SNP 0008.scaffold00029 79282 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 79300 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 79334 2 GA AG scaffold7854 ScafM INDEL 0008.scaffold00029 79339 2 GA .. scaffold7854 ScafM SNP 0008.scaffold00029 79342 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 79363 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 79364 4 .... TTTG scaffold7854 ScafM INDEL 0008.scaffold00029 79433 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 79474 1 G T scaffold7854 Both INDEL 0008.scaffold00029 79517 1 . T scaffold7854 Both SNP 0008.scaffold00029 79522 1 T A scaffold7854 Both SNP 0008.scaffold00029 79545 1 G A scaffold7854 Both SNP 0008.scaffold00029 79605 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 79657 1 C . scaffold7854 ScafM INDEL 0008.scaffold00029 79664 1 . C scaffold7854 Both SNP 0008.scaffold00029 79744 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 79777 25 GTAAGGGATCAACTTTTTGGGTTTC ......................... scaffold7854 ScafM SNP 0008.scaffold00029 79821 1 T C scaffold7854 Both SNP 0008.scaffold00029 80006 1 A T scaffold7854 Both INDEL 0008.scaffold00029 80022 2 AT .. scaffold7854 Both SNP 0008.scaffold00029 80143 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 80162 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 80172 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80185 2 CG AT scaffold7854 ScafM INDEL 0008.scaffold00029 80189 2 .. TT scaffold7854 ScafM INDEL 0008.scaffold00029 80238 7 ACTGACC ....... scaffold7854 ScafM SNP 0008.scaffold00029 80263 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 80347 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 80359 9 ......... TTAGCTGTC scaffold7854 ScafM SNP 0008.scaffold00029 80371 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 80373 1 G T scaffold7854 ScafM INDEL 0008.scaffold00029 80409 7 GACTAGA ....... scaffold7854 ScafM INDEL 0008.scaffold00029 80425 3 CCA ... scaffold7854 ScafM INDEL 0008.scaffold00029 80430 2 GG .. scaffold7854 ScafM SNP 0008.scaffold00029 80434 2 GG AT scaffold7854 ScafM SNP 0008.scaffold00029 80440 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 80449 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80456 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 80459 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80461 2 AC TT scaffold7854 ScafM INDEL 0008.scaffold00029 80468 3 ... AGT scaffold7854 ScafM SNP 0008.scaffold00029 80475 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 80479 7 ....... AGGTTTG scaffold7854 ScafM INDEL 0008.scaffold00029 80481 5 ..... TTATG scaffold7854 ScafM INDEL 0008.scaffold00029 80482 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 80492 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 80502 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80504 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 80506 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80509 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80538 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80543 3 AAA GTT scaffold7854 ScafM SNP 0008.scaffold00029 80555 1 G T scaffold7854 ScafM INDEL 0008.scaffold00029 80562 3 AAT ... scaffold7854 ScafM INDEL 0008.scaffold00029 80566 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 80572 12 TTTGAGTTTTTT ............ scaffold7854 ScafM INDEL 0008.scaffold00029 80586 4 AGTA .... scaffold7854 ScafM INDEL 0008.scaffold00029 80591 1 C . scaffold7854 ScafM INDEL 0008.scaffold00029 80594 11 TAAAAAAAAAA ........... scaffold7854 ScafM SNP 0008.scaffold00029 80608 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 80610 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 80612 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 80616 16 TCTCCTAGTAATTCTG ................ scaffold7854 ScafM INDEL 0008.scaffold00029 80634 9 TCTGATGAA ......... scaffold7854 ScafM SNP 0008.scaffold00029 80651 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 80656 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80660 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80666 2 GA AG scaffold7854 ScafM SNP 0008.scaffold00029 80670 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80672 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80691 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 80697 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 80710 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80722 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 80739 2 TT CG scaffold7854 ScafM INDEL 0008.scaffold00029 80742 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 80747 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 80773 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 80780 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80796 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 80800 3 ... TTT scaffold7854 ScafM SNP 0008.scaffold00029 80802 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 80817 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 80828 1 C . scaffold7854 ScafM SNP 0008.scaffold00029 80831 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 80837 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80841 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80851 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80861 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 80869 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80899 2 TC CT scaffold7854 ScafM SNP 0008.scaffold00029 80920 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 80922 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80927 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80950 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 80952 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 80991 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 80993 2 AG GA scaffold7854 ScafM SNP 0008.scaffold00029 81010 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 81016 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81018 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 81037 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81039 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 81060 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 81080 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 81110 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 81116 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 81128 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 81173 3 AAA ... scaffold7854 ScafM SNP 0008.scaffold00029 81178 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 81206 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 81215 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 81242 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 81252 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 81261 2 .. TA scaffold7854 ScafM SNP 0008.scaffold00029 81279 3 AAG GGA scaffold7854 ScafM SNP 0008.scaffold00029 81295 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 81314 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 81317 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 81323 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81325 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 81329 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 81337 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81341 2 AG GA scaffold7854 ScafM SNP 0008.scaffold00029 81352 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 81365 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 81377 2 TC .. scaffold7854 ScafM INDEL 0008.scaffold00029 81386 46 GAATATTTAGCTCTATCAAGAAACTGTCAAGATTAAAAGTGTCATT .............................................. scaffold7854 ScafM SNP 0008.scaffold00029 81444 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81460 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 81468 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 81478 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81482 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 81488 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 81491 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 81493 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 81497 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 81502 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 81543 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 81552 2 TC CT scaffold7854 ScafM SNP 0008.scaffold00029 81565 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 81975 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 81978 2 .. AT scaffold7854 ScafM INDEL 0008.scaffold00029 82003 2 .T GA scaffold7854 ScafM SNP 0008.scaffold00029 82016 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82041 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82047 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82074 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82089 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 82100 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 82106 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 82113 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82133 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 82143 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82184 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 82201 2 CT AC scaffold7854 ScafM SNP 0008.scaffold00029 82206 3 GCT ATA scaffold7854 ScafM SNP 0008.scaffold00029 82217 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 82219 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 82221 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 82239 1 C . scaffold7854 ScafM SNP 0008.scaffold00029 82246 2 TG CA scaffold7854 ScafM SNP 0008.scaffold00029 82268 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 82281 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82287 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82297 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 82302 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82310 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82349 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 82356 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 82366 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82368 2 TC CG scaffold7854 ScafM SNP 0008.scaffold00029 82374 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 82386 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82401 2 GT TA scaffold7854 ScafM SNP 0008.scaffold00029 82414 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 82418 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 82421 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 82425 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 82437 2 CA TT scaffold7854 ScafM SNP 0008.scaffold00029 82445 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 82451 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 82468 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 82474 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82482 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 82514 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82519 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82546 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82548 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 82559 3 ... AAC scaffold7854 ScafM SNP 0008.scaffold00029 82574 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82594 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 82598 7 ....... ATTTAAT scaffold7854 ScafM INDEL 0008.scaffold00029 82617 3 ... AAC scaffold7854 ScafM INDEL 0008.scaffold00029 82619 4 .... CAGG scaffold7854 ScafM INDEL 0008.scaffold00029 82621 16 ................ AAATTCAACCCGTCTT scaffold7854 ScafM INDEL 0008.scaffold00029 82622 18 .................. CAGAAAAAAAAAAAAAAG scaffold7854 ScafM SNP 0008.scaffold00029 82629 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82641 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 82647 1 C . scaffold7854 ScafM SNP 0008.scaffold00029 82667 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 82676 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82679 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 82681 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 82683 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82698 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 82737 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82741 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82743 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 82757 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 82761 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82764 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 82780 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 82788 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 82790 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 82792 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 82797 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 82801 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82824 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 82843 5 ..... ACAAG scaffold7854 ScafM SNP 0008.scaffold00029 82872 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 82883 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 82905 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 82944 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 82947 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 82965 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 83030 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 83037 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 83053 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 83056 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 83058 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 83092 2 TT AG scaffold7854 ScafM SNP 0008.scaffold00029 83123 1 G C scaffold7854 ScafM INDEL 0008.scaffold00029 83131 1 . C scaffold7854 ScafM INDEL 0008.scaffold00029 83135 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 83148 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 83165 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 83177 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 83187 2 GG AA scaffold7854 ScafM SNP 0008.scaffold00029 83195 2 TT AA scaffold7854 ScafM SNP 0008.scaffold00029 83201 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 83205 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 83221 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 83245 1 G . scaffold7854 ScafM SNP 0008.scaffold00029 83248 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 83273 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 83277 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 83293 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 83297 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 83307 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 83311 2 CG AA scaffold7854 Both SNP 0008.scaffold00029 83342 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 83349 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 83351 1 T C scaffold7854 Both SNP 0008.scaffold00029 83452 1 G A scaffold7854 Both SNP 0008.scaffold00029 83554 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 83564 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 83566 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 83665 1 T A scaffold7854 Both INDEL 0008.scaffold00029 83740 1 G . scaffold7854 Both SNP 0008.scaffold00029 83743 1 G A scaffold7854 Both SNP 0008.scaffold00029 83826 1 C G scaffold7854 Both SNP 0008.scaffold00029 83833 1 C G scaffold7854 Both SNP 0008.scaffold00029 83963 1 A G scaffold7854 Both SNP 0008.scaffold00029 84110 1 G C scaffold7854 Both SNP 0008.scaffold00029 84146 1 G A scaffold7854 Both SNP 0008.scaffold00029 84176 1 C T scaffold7854 Both SNP 0008.scaffold00029 84355 1 G T scaffold7854 Both SNP 0008.scaffold00029 84404 1 T G scaffold7854 Both SNP 0008.scaffold00029 84465 1 A G scaffold7854 Both SNP 0008.scaffold00029 84488 1 A G scaffold7854 ReadM SNP 0008.scaffold00029 84520 1 A T - Both SNP 0008.scaffold00029 84542 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 84573 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 84582 1 A C scaffold7854 Both INDEL 0008.scaffold00029 84625 1 . T scaffold7854 Both SNP 0008.scaffold00029 84639 1 A G scaffold7854 Both SNP 0008.scaffold00029 84663 1 G A scaffold7854 Both SNP 0008.scaffold00029 84801 1 C A scaffold7854 Both SNP 0008.scaffold00029 84823 1 A C scaffold7854 Both SNP 0008.scaffold00029 84868 1 C A scaffold7854 Both SNP 0008.scaffold00029 84879 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 84920 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 84928 3 TTA ... scaffold7854 ScafM SNP 0008.scaffold00029 84950 1 T G scaffold7854 Both SNP 0008.scaffold00029 85002 1 G T scaffold7854 Both SNP 0008.scaffold00029 85011 1 G T scaffold7854 Both SNP 0008.scaffold00029 85050 1 T C scaffold7854 Both SNP 0008.scaffold00029 85074 1 T G scaffold7854 Both SNP 0008.scaffold00029 85207 1 C T scaffold7854 Both SNP 0008.scaffold00029 85262 1 C T scaffold7854 Both INDEL 0008.scaffold00029 85473 2 TA .. scaffold7854 Both SNP 0008.scaffold00029 85532 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 85603 3 ACC GTG scaffold7854 ScafM INDEL 0008.scaffold00029 85607 2 .. GA scaffold7854 ScafM SNP 0008.scaffold00029 85611 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 85613 2 TA .. scaffold7854 ScafM INDEL 0008.scaffold00029 85616 2 GG .C scaffold7854 ScafM SNP 0008.scaffold00029 85641 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 85644 1 A T scaffold7854 Both SNP 0008.scaffold00029 85743 1 C T scaffold7854 Both SNP 0008.scaffold00029 86289 1 A T scaffold7854 Both SNP 0008.scaffold00029 86333 1 T C scaffold7854 Both SNP 0008.scaffold00029 86392 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 86420 4 .... ATAC scaffold7854 Both SNP 0008.scaffold00029 86549 1 C A scaffold7854 Both SNP 0008.scaffold00029 86572 1 C A scaffold7854 Both SNP 0008.scaffold00029 86609 1 G C scaffold7854 Both INDEL 0008.scaffold00029 86714 1 . A scaffold7854 Both INDEL 0008.scaffold00029 86766 1 A . scaffold7854 Both SNP 0008.scaffold00029 86821 1 C T scaffold7854 Both SNP 0008.scaffold00029 86844 1 C T scaffold7854 Both SNP 0008.scaffold00029 86875 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 86908 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 86912 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 86926 2 AC GT scaffold7854 Both SNP 0008.scaffold00029 86996 1 C T scaffold7854 Both SNP 0008.scaffold00029 87013 1 A G scaffold7854 Both SNP 0008.scaffold00029 87117 1 T G scaffold7854 Both SNP 0008.scaffold00029 87166 1 A T scaffold7854 ReadM INDEL 0008.scaffold00029 87226 1 A . - ScafM INDEL 0008.scaffold00029 87226 2 AA .C scaffold7854 ScafM SNP 0008.scaffold00029 87254 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 87256 4 CCCC ..AA scaffold7854 ScafM SNP 0008.scaffold00029 87261 2 GG AA scaffold7854 ScafM SNP 0008.scaffold00029 87268 1 A C scaffold7854 Both SNP 0008.scaffold00029 87278 1 T C scaffold7854 Both SNP 0008.scaffold00029 87369 1 A G scaffold7854 Both INDEL 0008.scaffold00029 87425 2 .. TG scaffold7854 Both SNP 0008.scaffold00029 87610 1 G A scaffold7854 Both SNP 0008.scaffold00029 87870 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 87903 8 ........ AGTCATAG scaffold7854 ScafM SNP 0008.scaffold00029 87913 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 87924 2 .A GT scaffold7854 ScafM SNP 0008.scaffold00029 87928 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 87937 7 GTACTAT ....... scaffold7854 ScafM SNP 0008.scaffold00029 87970 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 87981 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 87983 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 87995 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 87996 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 88006 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 88025 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88028 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88044 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88052 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 88085 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88112 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88123 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 88127 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 88131 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 88134 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88140 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 88144 2 AG GA scaffold7854 ScafM SNP 0008.scaffold00029 88179 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 88198 8 ........ TTTACAAG scaffold7854 ScafM SNP 0008.scaffold00029 88215 2 AG GA scaffold7854 Both SNP 0008.scaffold00029 88248 1 A G scaffold7854 Both SNP 0008.scaffold00029 88256 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88320 1 A C scaffold7854 Both INDEL 0008.scaffold00029 88345 1 G . scaffold7854 Both SNP 0008.scaffold00029 88359 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88377 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 88379 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88405 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 88436 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88439 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 88459 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 88461 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 88466 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88517 1 G C scaffold7854 ScafM INDEL 0008.scaffold00029 88539 4 AATG .... scaffold7854 ScafM SNP 0008.scaffold00029 88549 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 88564 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 88582 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 88597 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 88621 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 88628 2 .. AG scaffold7854 ScafM INDEL 0008.scaffold00029 88629 6 ...... CCCACA scaffold7854 ScafM SNP 0008.scaffold00029 88694 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 88698 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 88708 1 G A scaffold7854 Both SNP 0008.scaffold00029 88789 1 G A scaffold7854 Both SNP 0008.scaffold00029 88801 1 T C scaffold7854 Both SNP 0008.scaffold00029 88841 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 88866 1 A G scaffold7854 ReadM SNP 0008.scaffold00029 89326 1 T C - ReadM SNP 0008.scaffold00029 89364 1 C T - ReadM SNP 0008.scaffold00029 89491 1 T A - ReadM SNP 0008.scaffold00029 89579 1 C T - ReadM SNP 0008.scaffold00029 89587 1 A G - ScafM SNP 0008.scaffold00029 89655 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 89662 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 89665 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 89668 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 89670 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 89677 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 89691 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 89709 2 AA .T scaffold7854 ScafM SNP 0008.scaffold00029 89721 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 89745 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 89757 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 89761 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 89821 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 89849 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 89865 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 89881 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 89887 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 89889 1 T C scaffold7854 ReadM SNP 0008.scaffold00029 90031 1 A T - ReadM SNP 0008.scaffold00029 90070 1 T C - ReadM INDEL 0008.scaffold00029 90077 1 G . - ScafM SNP 0008.scaffold00029 90349 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 90356 4 CCCT TTGA scaffold7854 ScafM SNP 0008.scaffold00029 90399 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 90412 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 90430 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 90432 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 90435 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 90438 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 90447 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 90484 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 90513 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 90522 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 111867 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 111873 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 111886 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 111905 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 111924 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 111938 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 111941 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 111955 2 AC TT scaffold7854 ScafM SNP 0008.scaffold00029 111981 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112015 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 112042 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112044 2 CT TC scaffold7854 ScafM SNP 0008.scaffold00029 112057 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 112059 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112086 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 112097 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112099 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 112148 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 112150 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 112187 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 112205 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112211 2 AT CC scaffold7854 ScafM SNP 0008.scaffold00029 112219 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112221 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 112250 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 112536 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 112539 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112583 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112588 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 112624 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112663 2 TA AT scaffold7854 ScafM SNP 0008.scaffold00029 112702 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 112722 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 112727 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 112752 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112761 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 112778 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112790 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 112792 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 112826 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 112829 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 112858 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 112877 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112884 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 112899 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 112903 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 112914 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 112924 2 GC AA scaffold7854 ScafM SNP 0008.scaffold00029 112977 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 112984 2 TA CT scaffold7854 ScafM SNP 0008.scaffold00029 112989 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112996 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 112998 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 113006 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 113013 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113016 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 113023 1 G A scaffold7854 ReadM SNP 0008.scaffold00029 113120 1 T A - ReadM SNP 0008.scaffold00029 113165 1 A G - Both SNP 0008.scaffold00029 113188 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 113242 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 113263 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 113266 3 AAC ... scaffold7854 ScafM SNP 0008.scaffold00029 113271 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 113273 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 113277 1 C . scaffold7854 ScafM INDEL 0008.scaffold00029 113279 1 C . scaffold7854 ScafM SNP 0008.scaffold00029 113282 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 113285 5 TTTTT ..... scaffold7854 ScafM SNP 0008.scaffold00029 113292 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 113296 4 TTCA ...G scaffold7854 ScafM INDEL 0008.scaffold00029 113304 4 ACAA .... scaffold7854 ScafM SNP 0008.scaffold00029 113310 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 113313 2 CA .. scaffold7854 ScafM SNP 0008.scaffold00029 113355 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 113381 2 .. TT scaffold7854 ScafM SNP 0008.scaffold00029 113388 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 113422 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 113439 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 113456 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113465 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113499 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 113529 2 GA TG scaffold7854 ScafM SNP 0008.scaffold00029 113536 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 113558 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 113563 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 113579 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 113588 1 . T scaffold7854 Both INDEL 0008.scaffold00029 113685 2 .. AG scaffold7854 Both SNP 0008.scaffold00029 113715 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113777 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113792 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 113799 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 113803 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 113858 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 113861 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 113867 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 113876 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113879 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 113976 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 113983 1 G . scaffold7854 ScafM SNP 0008.scaffold00029 114031 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 114034 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 114081 3 TTT ... scaffold7854 ScafM INDEL 0008.scaffold00029 114107 2 TT .. scaffold7854 ScafM SNP 0008.scaffold00029 114117 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 114146 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 114172 3 ATA ... scaffold7854 ScafM INDEL 0008.scaffold00029 114176 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 114208 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 114210 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 114227 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 114237 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 114463 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 114479 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 114493 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 114507 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 114510 1 T . scaffold7854 ScafM SNP 0008.scaffold00029 114545 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 114553 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 114574 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 114579 5 ..... TTTAA scaffold7854 ScafM SNP 0008.scaffold00029 114638 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 114641 4 GATG .... scaffold7854 ScafM SNP 0008.scaffold00029 114657 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 114693 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 114695 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 114762 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 114767 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 114793 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 114802 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 116234 2 TT AG scaffold18284 ScafM SNP 0008.scaffold00029 116240 1 A C scaffold18284 ScafM SNP 0008.scaffold00029 116249 1 A G scaffold18284 ScafM SNP 0008.scaffold00029 116318 1 C T scaffold18284 ScafM SNP 0008.scaffold00029 116326 1 A G scaffold18284 ScafM SNP 0008.scaffold00029 117316 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 117343 1 C A scaffold26089 ScafM INDEL 0008.scaffold00029 117356 1 . T scaffold26089 ScafM SNP 0008.scaffold00029 117368 1 T G scaffold26089 ScafM SNP 0008.scaffold00029 117371 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 117383 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 117395 1 C T scaffold26089 ReadM SNP 0008.scaffold00029 117842 1 T G - ReadM SNP 0008.scaffold00029 117950 1 G A - ScafM SNP 0008.scaffold00029 118043 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 118055 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118095 1 A C scaffold26089 ScafM SNP 0008.scaffold00029 118097 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 118127 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 118148 1 T A scaffold26089 ScafM SNP 0008.scaffold00029 118170 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 118186 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 118202 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 118234 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 118245 2 CC TT scaffold26089 ScafM SNP 0008.scaffold00029 118255 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 118264 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 118268 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118271 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118284 1 C G scaffold26089 ScafM SNP 0008.scaffold00029 118286 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 118329 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118334 1 T G scaffold26089 ScafM SNP 0008.scaffold00029 118339 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118379 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 118385 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118409 1 G C scaffold26089 ScafM SNP 0008.scaffold00029 118412 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 118431 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 118448 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 118467 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 118516 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 118520 1 A C scaffold26089 ScafM SNP 0008.scaffold00029 118530 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 118532 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 118574 1 A G scaffold26089 ReadM SNP 0008.scaffold00029 118639 1 G T - ReadM SNP 0008.scaffold00029 118719 1 T C - ReadM SNP 0008.scaffold00029 118808 1 C A - ReadM SNP 0008.scaffold00029 118822 1 A G - ReadM SNP 0008.scaffold00029 118858 1 T C - ReadM SNP 0008.scaffold00029 118893 1 G A - ReadM SNP 0008.scaffold00029 118915 1 C T - ReadM SNP 0008.scaffold00029 118975 1 C T - ScafM SNP 0008.scaffold00029 119039 1 C T scaffold26089 ScafM SNP 0008.scaffold00029 119042 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 119075 1 C T scaffold26089 ScafM SNP 0008.scaffold00029 119098 1 C A scaffold26089 ScafM INDEL 0008.scaffold00029 119119 1 T . scaffold26089 ScafM SNP 0008.scaffold00029 119151 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 119153 1 A T scaffold26089 ScafM SNP 0008.scaffold00029 119215 2 GA AG scaffold26089 ScafM SNP 0008.scaffold00029 119234 1 A G scaffold26089 Both SNP 0008.scaffold00029 119258 1 A G scaffold26089 Both SNP 0008.scaffold00029 119272 1 G A scaffold26089 Both SNP 0008.scaffold00029 119347 1 T C scaffold26089 Both SNP 0008.scaffold00029 119372 1 C T scaffold26089 Both SNP 0008.scaffold00029 119459 1 A G scaffold26089 Both SNP 0008.scaffold00029 119471 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 119489 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 119501 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 119516 2 AC GA scaffold26089 ScafM SNP 0008.scaffold00029 119594 1 A C scaffold26089 Both SNP 0008.scaffold00029 119603 1 G T scaffold26089 Both SNP 0008.scaffold00029 119613 1 G A scaffold26089 Both SNP 0008.scaffold00029 119661 1 C A scaffold26089 Both SNP 0008.scaffold00029 119696 1 A G scaffold26089 Both SNP 0008.scaffold00029 119757 1 A C scaffold26089 Both SNP 0008.scaffold00029 119777 1 C A scaffold26089 ScafM SNP 0008.scaffold00029 119801 1 A G scaffold26089 ScafM SNP 0008.scaffold00029 119814 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 119822 1 T G scaffold26089 ScafM SNP 0008.scaffold00029 119858 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 119871 1 G A scaffold26089 ScafM SNP 0008.scaffold00029 119893 2 AG CT scaffold26089 ScafM SNP 0008.scaffold00029 119899 1 T C scaffold26089 ScafM SNP 0008.scaffold00029 119904 1 G T scaffold26089 ScafM SNP 0008.scaffold00029 119922 1 C T scaffold26089 Both SNP 0008.scaffold00029 119951 1 A G scaffold26089 ReadM SNP 0008.scaffold00029 119998 1 C T - ReadM SNP 0008.scaffold00029 120068 1 T G - ReadM SNP 0008.scaffold00029 120104 1 G A - ReadM SNP 0008.scaffold00029 120132 1 G A - ReadM SNP 0008.scaffold00029 120160 1 C T - ReadM SNP 0008.scaffold00029 120283 1 A C - ReadM SNP 0008.scaffold00029 120433 1 G T - ReadM SNP 0008.scaffold00029 120459 1 C T - ReadM SNP 0008.scaffold00029 120542 1 A G - ReadM SNP 0008.scaffold00029 120572 1 G A - ReadM SNP 0008.scaffold00029 120623 1 C T - ReadM SNP 0008.scaffold00029 120818 1 T C - ReadM SNP 0008.scaffold00029 120860 1 T C - ReadM SNP 0008.scaffold00029 120893 1 C G - ReadM INDEL 0008.scaffold00029 120993 1 A . - ReadM SNP 0008.scaffold00029 121000 1 T C - ReadM SNP 0008.scaffold00029 121004 1 G T - ReadM SNP 0008.scaffold00029 121205 1 T C - ReadM SNP 0008.scaffold00029 121241 1 A G - ReadM SNP 0008.scaffold00029 121274 1 G A - ReadM SNP 0008.scaffold00029 121298 1 G T - ReadM SNP 0008.scaffold00029 121314 1 C T - ReadM SNP 0008.scaffold00029 121349 1 T C - ReadM SNP 0008.scaffold00029 121394 1 G A - ReadM SNP 0008.scaffold00029 121430 1 A C - ScafM SNP 0008.scaffold00029 121469 1 A T scaffold26089 Both SNP 0008.scaffold00029 121514 1 C A scaffold26089 ReadM SNP 0008.scaffold00029 121682 1 A G - ReadM SNP 0008.scaffold00029 121687 1 C G - ReadM SNP 0008.scaffold00029 121726 1 G A - ReadM SNP 0008.scaffold00029 121819 1 T A - ReadM SNP 0008.scaffold00029 121825 1 A C - ReadM SNP 0008.scaffold00029 122035 1 T C - ScafM INDEL 0008.scaffold00029 122879 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 122882 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 122887 4 AATT .... scaffold7854 ScafM SNP 0008.scaffold00029 122904 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 122947 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 122990 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 123009 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 123013 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 123042 2 .. AC scaffold7854 ScafM SNP 0008.scaffold00029 123164 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 123178 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 123191 2 TA AC scaffold7854 ScafM SNP 0008.scaffold00029 123222 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 123246 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 123266 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 123274 1 T A scaffold7854 Both SNP 0008.scaffold00029 123303 1 A T scaffold7854 Both SNP 0008.scaffold00029 123335 1 G C scaffold7854 Both SNP 0008.scaffold00029 123374 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 123394 2 AA .. scaffold7854 ScafM INDEL 0008.scaffold00029 123400 9 CCGCATTTT ......... scaffold7854 ScafM INDEL 0008.scaffold00029 123410 3 AAG ... scaffold7854 ScafM INDEL 0008.scaffold00029 123415 5 ATTAA ..... scaffold7854 ScafM INDEL 0008.scaffold00029 123422 1 T . scaffold7854 ScafM INDEL 0008.scaffold00029 123425 1 G . scaffold7854 ScafM INDEL 0008.scaffold00029 123427 2 CT .. scaffold7854 ScafM INDEL 0008.scaffold00029 123430 6 AGAAAA ...... scaffold7854 ScafM SNP 0008.scaffold00029 123443 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 123476 2 .. TG scaffold7854 ScafM INDEL 0008.scaffold00029 123478 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 123499 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 123506 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 123523 1 G A scaffold7854 Both SNP 0008.scaffold00029 123535 1 T A scaffold7854 Both SNP 0008.scaffold00029 123664 1 T C scaffold7854 Both SNP 0008.scaffold00029 123802 1 T G scaffold7854 Both SNP 0008.scaffold00029 124042 1 T C scaffold7854 Both SNP 0008.scaffold00029 124553 1 T A scaffold7854 Both SNP 0008.scaffold00029 124613 1 A G scaffold7854 Both SNP 0008.scaffold00029 124663 1 A T scaffold7854 Both SNP 0008.scaffold00029 124691 1 A T scaffold7854 Both SNP 0008.scaffold00029 124735 1 A T scaffold7854 Both SNP 0008.scaffold00029 125087 1 A T scaffold7854 Both SNP 0008.scaffold00029 125128 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 125512 1 C T - ScafM INDEL 0008.scaffold00029 125758 32 ................................ TATCTTAAGGGTGTGGGTTTTAAAAAGGAGTA scaffold7854 ReadM INDEL 0008.scaffold00029 125882 1 T . - ScafM INDEL 0008.scaffold00029 125882 2 TA .G scaffold7854 Both INDEL 0008.scaffold00029 126127 1 G . scaffold7854 ReadM INDEL 0008.scaffold00029 126328 3 ... TTT - ScafM INDEL 0008.scaffold00029 126339 4 .... TTTT scaffold7854 Both SNP 0008.scaffold00029 126439 1 C T scaffold7854 Both SNP 0008.scaffold00029 126441 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 126593 1 A T scaffold7854 ReadM SNP 0008.scaffold00029 126987 1 A C - ReadM SNP 0008.scaffold00029 127045 1 G A - Both SNP 0008.scaffold00029 127093 1 T C scaffold7854 Both SNP 0008.scaffold00029 127196 1 C A scaffold7854 Both SNP 0008.scaffold00029 127733 1 A G scaffold7854 Both SNP 0008.scaffold00029 127963 1 C T scaffold7854 Both SNP 0008.scaffold00029 128020 1 C T scaffold7854 Both SNP 0008.scaffold00029 128026 1 G T scaffold7854 Both SNP 0008.scaffold00029 128028 1 G T scaffold7854 Both SNP 0008.scaffold00029 128418 1 C G scaffold7854 Both SNP 0008.scaffold00029 128812 1 T A scaffold7854 Both SNP 0008.scaffold00029 129078 1 T C scaffold7854 Both SNP 0008.scaffold00029 129217 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 129223 3 AGT ... scaffold7854 ScafM SNP 0008.scaffold00029 129251 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 129326 27 ........................... TATCTGGGCATTAATGGATGGTTGGTG scaffold7854 Both SNP 0008.scaffold00029 129392 1 T C scaffold7854 Both SNP 0008.scaffold00029 129835 1 G T scaffold7854 Both SNP 0008.scaffold00029 129872 1 G T scaffold7854 Both SNP 0008.scaffold00029 129881 1 A C scaffold7854 Both SNP 0008.scaffold00029 129890 1 T G scaffold7854 Both SNP 0008.scaffold00029 129956 1 T C scaffold7854 Both SNP 0008.scaffold00029 130067 1 G T scaffold7854 Both SNP 0008.scaffold00029 130352 1 A T scaffold7854 Both SNP 0008.scaffold00029 130518 1 A C scaffold7854 Both SNP 0008.scaffold00029 130605 1 A G scaffold7854 Both SNP 0008.scaffold00029 130634 1 A G scaffold7854 Both SNP 0008.scaffold00029 131250 1 C T scaffold7854 Both SNP 0008.scaffold00029 131306 1 T C scaffold7854 Both SNP 0008.scaffold00029 131634 1 T C scaffold7854 Both SNP 0008.scaffold00029 131676 1 T G scaffold7854 Both SNP 0008.scaffold00029 131696 1 A G scaffold7854 Both SNP 0008.scaffold00029 131894 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 131951 15 ............... ATTATTATTATTAGG scaffold7854 ScafM INDEL 0008.scaffold00029 132001 3 TCT ... scaffold7854 ScafM SNP 0008.scaffold00029 132005 1 C A scaffold7854 Both SNP 0008.scaffold00029 132066 1 T C scaffold7854 Both SNP 0008.scaffold00029 132089 1 A G scaffold7854 Both INDEL 0008.scaffold00029 132104 1 T . scaffold7854 ScafM INDEL 0008.scaffold00029 132156 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 132159 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 132171 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 132175 2 AG .. scaffold7854 Both SNP 0008.scaffold00029 132243 1 T A scaffold7854 Both SNP 0008.scaffold00029 132408 1 A G scaffold7854 Both SNP 0008.scaffold00029 132460 1 C T scaffold7854 Both SNP 0008.scaffold00029 132591 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 132674 1 T C scaffold7854 Both SNP 0008.scaffold00029 133247 1 G A scaffold7854 Both SNP 0008.scaffold00029 133296 1 G C scaffold7854 ScafM INDEL 0008.scaffold00029 133332 1 . T scaffold7854 ReadM SNP 0008.scaffold00029 133506 1 G T - ReadM SNP 0008.scaffold00029 133511 1 A T - Both SNP 0008.scaffold00029 133899 2 GG AA scaffold7854 Both SNP 0008.scaffold00029 133984 1 T G scaffold7854 Both SNP 0008.scaffold00029 134003 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 134041 9 ......... TTGAGGTGG scaffold7854 Both SNP 0008.scaffold00029 134090 1 A G scaffold7854 Both SNP 0008.scaffold00029 134102 1 G A scaffold7854 Both SNP 0008.scaffold00029 134227 2 CC TT scaffold7854 Both SNP 0008.scaffold00029 134496 1 T C scaffold7854 Both SNP 0008.scaffold00029 134794 1 G T scaffold7854 Both SNP 0008.scaffold00029 135039 1 G A scaffold7854 Both SNP 0008.scaffold00029 135931 1 A T scaffold7854 Both SNP 0008.scaffold00029 136020 1 C G scaffold7854 Both INDEL 0008.scaffold00029 136722 1 G . scaffold7854 Both SNP 0008.scaffold00029 136756 1 T C scaffold7854 Both SNP 0008.scaffold00029 136789 1 G A scaffold7854 Both SNP 0008.scaffold00029 136836 1 C T scaffold7854 Both SNP 0008.scaffold00029 136902 1 A G scaffold7854 Both INDEL 0008.scaffold00029 136977 1 . C scaffold7854 Both SNP 0008.scaffold00029 137145 1 C T scaffold7854 Both SNP 0008.scaffold00029 137250 1 T C scaffold7854 Both SNP 0008.scaffold00029 137270 1 A G scaffold7854 Both INDEL 0008.scaffold00029 137379 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 137388 1 C G scaffold7854 Both SNP 0008.scaffold00029 137643 1 C T scaffold7854 Both SNP 0008.scaffold00029 137701 1 T A scaffold7854 Both SNP 0008.scaffold00029 138078 1 C T scaffold7854 Both INDEL 0008.scaffold00029 138149 3 ... AAG scaffold7854 ReadM INDEL 0008.scaffold00029 138154 3 ... GAC - ScafM SNP 0008.scaffold00029 138873 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 138877 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 139336 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 139410 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 139501 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 139503 3 TTG ... scaffold7854 ScafM SNP 0008.scaffold00029 139516 1 G T scaffold7854 Both SNP 0008.scaffold00029 139853 1 C T scaffold7854 Both SNP 0008.scaffold00029 140184 1 G C scaffold7854 Both SNP 0008.scaffold00029 140570 1 A G scaffold7854 Both SNP 0008.scaffold00029 140666 1 G A scaffold7854 Both INDEL 0008.scaffold00029 140670 1 . A scaffold7854 Both SNP 0008.scaffold00029 140762 1 C T scaffold7854 Both SNP 0008.scaffold00029 140913 1 A G scaffold7854 ReadM SNP 0008.scaffold00029 141010 1 T C - ReadM SNP 0008.scaffold00029 141071 1 T C - Both SNP 0008.scaffold00029 141205 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 141260 22 ...................... TTTCTTTCCCCCCTTTTTTTTT scaffold7854 ScafM SNP 0008.scaffold00029 141344 2 AC CT scaffold7854 Both INDEL 0008.scaffold00029 141377 1 . A scaffold7854 ScafM SNP 0008.scaffold00029 141384 1 A T scaffold7854 ReadM SNP 0008.scaffold00029 141494 1 C T - Both SNP 0008.scaffold00029 141586 1 T C scaffold7854 ReadM SNP 0008.scaffold00029 141920 1 C T - ReadM SNP 0008.scaffold00029 141940 1 G C - Both SNP 0008.scaffold00029 142063 1 C T scaffold7854 Both SNP 0008.scaffold00029 142392 1 A C scaffold7854 Both SNP 0008.scaffold00029 142721 1 G C scaffold7854 Both SNP 0008.scaffold00029 142805 1 T C scaffold7854 Both SNP 0008.scaffold00029 142840 1 T C scaffold7854 Both SNP 0008.scaffold00029 142911 1 A G scaffold7854 ReadM SNP 0008.scaffold00029 143342 1 G T - ReadM SNP 0008.scaffold00029 143873 1 G A - ReadM SNP 0008.scaffold00029 143945 1 A G - ReadM SNP 0008.scaffold00029 143983 1 T C - ReadM SNP 0008.scaffold00029 143986 1 C G - Both SNP 0008.scaffold00029 144292 1 A G scaffold7854 Both SNP 0008.scaffold00029 144563 1 C T scaffold7854 Both INDEL 0008.scaffold00029 144642 1 T . scaffold7854 Both SNP 0008.scaffold00029 144877 1 T C scaffold7854 Both INDEL 0008.scaffold00029 145589 1 . A scaffold7854 Both SNP 0008.scaffold00029 145610 1 C T scaffold7854 Both SNP 0008.scaffold00029 145723 1 T C scaffold7854 Both SNP 0008.scaffold00029 145823 1 G A scaffold7854 Both INDEL 0008.scaffold00029 145967 1 . C scaffold7854 ReadM SNP 0008.scaffold00029 146494 1 G T - Both SNP 0008.scaffold00029 146704 1 A G scaffold7854 Both SNP 0008.scaffold00029 146870 1 C T scaffold7854 Both SNP 0008.scaffold00029 146933 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 147105 2 .. TT scaffold7854 Both SNP 0008.scaffold00029 147232 1 A T scaffold7854 Both SNP 0008.scaffold00029 147265 1 G T scaffold7854 Both SNP 0008.scaffold00029 147623 1 C A scaffold7854 ReadM SNP 0008.scaffold00029 148098 1 A G - ReadM INDEL 0008.scaffold00029 148132 1 . C - Both SNP 0008.scaffold00029 148318 1 A C scaffold7854 Both SNP 0008.scaffold00029 148484 1 T C scaffold7854 Both SNP 0008.scaffold00029 148626 1 G A scaffold7854 Both SNP 0008.scaffold00029 148659 1 A T scaffold7854 Both SNP 0008.scaffold00029 148888 1 A C scaffold7854 Both SNP 0008.scaffold00029 149103 1 A T scaffold7854 Both SNP 0008.scaffold00029 149134 1 G A scaffold7854 Both SNP 0008.scaffold00029 149490 1 G T scaffold7854 Both SNP 0008.scaffold00029 149527 1 A G scaffold7854 Both SNP 0008.scaffold00029 149815 1 G T scaffold7854 Both SNP 0008.scaffold00029 149954 1 T C scaffold7854 Both SNP 0008.scaffold00029 150203 1 T C scaffold7854 Both SNP 0008.scaffold00029 150358 1 G A scaffold7854 ReadM SNP 0008.scaffold00029 150438 1 C T - Both SNP 0008.scaffold00029 150606 1 A C scaffold7854 Both SNP 0008.scaffold00029 150726 1 C G scaffold7854 Both SNP 0008.scaffold00029 151017 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 151230 1 T C - ReadM SNP 0008.scaffold00029 151317 1 A G - ReadM INDEL 0008.scaffold00029 151355 2 AG .. - ScafM INDEL 0008.scaffold00029 151853 4 TGAA .... scaffold7854 ScafM INDEL 0008.scaffold00029 151859 1 G . scaffold7854 ScafM INDEL 0008.scaffold00029 152281 5 ..... ACTTT scaffold7854 Both SNP 0008.scaffold00029 152443 1 C A scaffold7854 ReadM SNP 0008.scaffold00029 152500 1 C T - ReadM SNP 0008.scaffold00029 152579 1 T C - ReadM SNP 0008.scaffold00029 152792 1 T C - ReadM SNP 0008.scaffold00029 152834 1 G A - Both SNP 0008.scaffold00029 152980 1 C T scaffold7854 Both SNP 0008.scaffold00029 153075 1 C T scaffold7854 Both SNP 0008.scaffold00029 153106 1 T C scaffold7854 Both SNP 0008.scaffold00029 153119 1 G T scaffold7854 ReadM SNP 0008.scaffold00029 153137 1 T C - ReadM SNP 0008.scaffold00029 153145 1 C T - ReadM SNP 0008.scaffold00029 153266 1 T C - ReadM SNP 0008.scaffold00029 153767 1 G A - ScafM SNP 0008.scaffold00029 154223 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 154269 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 155373 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 155599 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 155617 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 155619 1 A C scaffold7854 Both INDEL 0008.scaffold00029 155748 1 . T scaffold7854 Both SNP 0008.scaffold00029 155782 1 G A scaffold7854 Both INDEL 0008.scaffold00029 155843 1 A . scaffold7854 ReadM SNP 0008.scaffold00029 155934 1 A G - Both SNP 0008.scaffold00029 156253 1 T C scaffold7854 Both SNP 0008.scaffold00029 156317 1 T C scaffold7854 Both SNP 0008.scaffold00029 156454 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 156551 1 T G scaffold7854 Both SNP 0008.scaffold00029 156586 1 T G scaffold7854 Both SNP 0008.scaffold00029 156621 1 C T scaffold7854 Both SNP 0008.scaffold00029 156813 1 A G scaffold7854 Both SNP 0008.scaffold00029 156854 1 A G scaffold7854 Both SNP 0008.scaffold00029 157086 1 A G scaffold7854 Both SNP 0008.scaffold00029 157125 1 A C scaffold7854 Both SNP 0008.scaffold00029 157227 1 T C scaffold7854 Both SNP 0008.scaffold00029 157461 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 157737 6 CATCTT ...... scaffold7854 Both SNP 0008.scaffold00029 157790 1 C T scaffold7854 Both SNP 0008.scaffold00029 157878 1 A G scaffold7854 Both SNP 0008.scaffold00029 157912 1 T C scaffold7854 Both SNP 0008.scaffold00029 157991 1 G T scaffold7854 Both SNP 0008.scaffold00029 158155 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 158250 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 158254 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 158258 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 158260 1 T C scaffold7854 Both SNP 0008.scaffold00029 158306 1 A G scaffold7854 Both SNP 0008.scaffold00029 158403 1 T A scaffold7854 Both INDEL 0008.scaffold00029 158677 1 T . scaffold7854 ReadM SNP 0008.scaffold00029 158859 1 T C - ReadM SNP 0008.scaffold00029 158931 1 A G - ScafM SNP 0008.scaffold00029 159297 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 159315 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 159342 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 159347 1 C A scaffold7854 ReadM SNP 0008.scaffold00029 169141 1 A G - ReadM SNP 0008.scaffold00029 169248 1 C T - ReadM SNP 0008.scaffold00029 169502 1 G A - ReadM SNP 0008.scaffold00029 169599 1 G A - ReadM SNP 0008.scaffold00029 169621 1 G A - ReadM SNP 0008.scaffold00029 169631 1 T G - ReadM SNP 0008.scaffold00029 169643 1 C A - ReadM SNP 0008.scaffold00029 169712 1 C T - ReadM INDEL 0008.scaffold00029 169891 1 T . - ReadM SNP 0008.scaffold00029 170090 1 T C - ReadM SNP 0008.scaffold00029 170098 1 A C - ReadM SNP 0008.scaffold00029 170215 1 A C - ReadM SNP 0008.scaffold00029 170305 1 A G - ReadM SNP 0008.scaffold00029 170350 1 C T - ScafM SNP 0008.scaffold00029 170651 1 C T scaffold7854 Both SNP 0008.scaffold00029 170697 1 T C scaffold7854 ReadM SNP 0008.scaffold00029 170816 1 T G - ReadM SNP 0008.scaffold00029 170820 1 C G - ReadM SNP 0008.scaffold00029 171154 1 G A - ReadM SNP 0008.scaffold00029 171307 1 A G - ReadM SNP 0008.scaffold00029 171376 1 G T - ReadM SNP 0008.scaffold00029 171414 1 G A - ReadM SNP 0008.scaffold00029 171488 1 T C - ReadM SNP 0008.scaffold00029 171568 1 G T - ReadM SNP 0008.scaffold00029 171774 1 C T - ReadM SNP 0008.scaffold00029 171802 1 C T - Both SNP 0008.scaffold00029 171918 1 G A scaffold7854 Both SNP 0008.scaffold00029 171931 1 T G scaffold7854 ReadM SNP 0008.scaffold00029 172408 1 T C - ReadM SNP 0008.scaffold00029 172439 1 T A - ReadM SNP 0008.scaffold00029 172719 1 T C - ReadM SNP 0008.scaffold00029 172739 1 C A - ReadM SNP 0008.scaffold00029 172821 1 C T - ReadM SNP 0008.scaffold00029 172839 1 G C - ReadM SNP 0008.scaffold00029 172955 1 A G - ReadM SNP 0008.scaffold00029 172960 1 A C - ReadM SNP 0008.scaffold00029 172991 1 T G - ReadM SNP 0008.scaffold00029 173091 1 C T - ReadM SNP 0008.scaffold00029 173239 1 G A - ReadM SNP 0008.scaffold00029 173312 1 C T - ReadM SNP 0008.scaffold00029 173358 1 G A - ReadM SNP 0008.scaffold00029 173384 1 G A - ReadM INDEL 0008.scaffold00029 173405 2 TA .. - ReadM SNP 0008.scaffold00029 173580 1 C T - ReadM SNP 0008.scaffold00029 173611 1 T C - ReadM SNP 0008.scaffold00029 173654 1 A G - ReadM SNP 0008.scaffold00029 173815 1 T G - ReadM SNP 0008.scaffold00029 173820 1 A G - ReadM SNP 0008.scaffold00029 173836 1 G A - ReadM SNP 0008.scaffold00029 173851 1 G A - ReadM SNP 0008.scaffold00029 173978 1 G A - ReadM SNP 0008.scaffold00029 174251 1 C T - ReadM SNP 0008.scaffold00029 174269 1 T C - ReadM SNP 0008.scaffold00029 174659 1 C G - ReadM SNP 0008.scaffold00029 174663 1 C G - ReadM SNP 0008.scaffold00029 174827 1 A T - ReadM SNP 0008.scaffold00029 175442 1 A T - ReadM SNP 0008.scaffold00029 175605 1 A G - ReadM SNP 0008.scaffold00029 175723 1 G A - ReadM SNP 0008.scaffold00029 175879 1 G A - ReadM SNP 0008.scaffold00029 175890 1 A G - ReadM SNP 0008.scaffold00029 175942 1 A T - ReadM SNP 0008.scaffold00029 175982 1 A G - ReadM SNP 0008.scaffold00029 176038 1 T C - ReadM SNP 0008.scaffold00029 176060 1 C T - ReadM SNP 0008.scaffold00029 176261 1 G A - ReadM SNP 0008.scaffold00029 176313 1 G A - ReadM SNP 0008.scaffold00029 176529 1 T A - ReadM SNP 0008.scaffold00029 176802 1 G A - ReadM SNP 0008.scaffold00029 176815 1 T C - ReadM SNP 0008.scaffold00029 176823 1 A C - ReadM SNP 0008.scaffold00029 176849 1 A G - ReadM SNP 0008.scaffold00029 176853 1 T G - ReadM SNP 0008.scaffold00029 176887 1 G A - ReadM SNP 0008.scaffold00029 177001 1 T C - ReadM SNP 0008.scaffold00029 177154 1 C T - ReadM SNP 0008.scaffold00029 177169 1 G A - ReadM SNP 0008.scaffold00029 177200 1 G A - ScafM SNP 0008.scaffold00029 177289 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 177323 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 177614 1 C T - Both SNP 0008.scaffold00029 177820 1 A C scaffold7854 Both SNP 0008.scaffold00029 177869 1 T C scaffold7854 Both INDEL 0008.scaffold00029 177967 1 . C scaffold7854 Both SNP 0008.scaffold00029 177978 1 G A scaffold7854 Both SNP 0008.scaffold00029 178002 1 G A scaffold7854 Both SNP 0008.scaffold00029 178093 1 A T scaffold7854 Both SNP 0008.scaffold00029 178205 1 A G scaffold7854 Both SNP 0008.scaffold00029 178316 1 C G scaffold7854 Both INDEL 0008.scaffold00029 178389 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 178513 2 GT AA scaffold7854 ScafM SNP 0008.scaffold00029 178541 2 GT AG scaffold7854 ScafM INDEL 0008.scaffold00029 178630 8 ........ CAATTCTA scaffold7854 Both SNP 0008.scaffold00029 178730 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 178887 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 178899 11 TTTGTCTTTTC ........... scaffold7854 ScafM INDEL 0008.scaffold00029 178946 7 TGATTGT ....... scaffold7854 Both INDEL 0008.scaffold00029 178995 2 TT .. scaffold7854 Both SNP 0008.scaffold00029 179121 1 T C scaffold7854 Both SNP 0008.scaffold00029 179124 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 179161 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 179175 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 179198 1 A G scaffold7854 Both SNP 0008.scaffold00029 179217 1 A G scaffold7854 Both SNP 0008.scaffold00029 179242 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 179306 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 179317 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 179322 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 179354 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 179369 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 179372 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 179381 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 179398 3 ATT GAA scaffold7854 ScafM INDEL 0008.scaffold00029 179443 2 AA .T scaffold7854 ScafM SNP 0008.scaffold00029 179451 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 179455 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 179468 2 .. CA scaffold7854 ScafM INDEL 0008.scaffold00029 179537 1 C . scaffold7854 ScafM SNP 0008.scaffold00029 179549 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 179566 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 179583 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 179610 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 179642 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 179644 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 179661 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 179667 1 . A scaffold7854 Both SNP 0008.scaffold00029 179746 1 C A scaffold7854 Both SNP 0008.scaffold00029 179844 1 T A scaffold7854 Both SNP 0008.scaffold00029 179850 1 T A scaffold7854 Both INDEL 0008.scaffold00029 179863 1 T . scaffold7854 Both INDEL 0008.scaffold00029 180037 1 . G scaffold7854 Both SNP 0008.scaffold00029 180148 1 C G scaffold7854 Both SNP 0008.scaffold00029 180232 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 180256 2 .. TC scaffold7854 Both SNP 0008.scaffold00029 180286 1 T C scaffold7854 Both SNP 0008.scaffold00029 180331 1 G C scaffold7854 Both INDEL 0008.scaffold00029 180396 2 TA .. scaffold7854 Both SNP 0008.scaffold00029 180478 1 G C scaffold7854 Both SNP 0008.scaffold00029 180487 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 180536 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 180576 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 180582 2 TC .A scaffold7854 ScafM INDEL 0008.scaffold00029 180593 1 A . scaffold7854 ScafM SNP 0008.scaffold00029 180615 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 180621 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 180626 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 180632 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 180639 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 180648 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 180659 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 180660 4 .... CCTC scaffold7854 ScafM INDEL 0008.scaffold00029 180661 1 . A scaffold7854 ScafM INDEL 0008.scaffold00029 180662 3 ... TTT scaffold7854 ScafM INDEL 0008.scaffold00029 180665 12 ............ ATATTATGGGAT scaffold7854 Both SNP 0008.scaffold00029 180712 1 G T scaffold7854 Both SNP 0008.scaffold00029 180754 1 T A scaffold7854 Both SNP 0008.scaffold00029 180785 1 T A scaffold7854 ScafM INDEL 0008.scaffold00029 180798 10 GTGAAAATTG .......... scaffold7854 ScafM SNP 0008.scaffold00029 180814 1 A C scaffold7854 Both SNP 0008.scaffold00029 180832 1 G C scaffold7854 Both SNP 0008.scaffold00029 180850 1 G A scaffold7854 Both SNP 0008.scaffold00029 180911 1 A T scaffold7854 Both SNP 0008.scaffold00029 180925 1 G A scaffold7854 Both SNP 0008.scaffold00029 180955 1 A T scaffold7854 Both SNP 0008.scaffold00029 180980 1 T C scaffold7854 Both SNP 0008.scaffold00029 181189 1 C T scaffold7854 Both SNP 0008.scaffold00029 181195 1 G A scaffold7854 Both SNP 0008.scaffold00029 181294 1 T A scaffold7854 Both SNP 0008.scaffold00029 181317 1 T C scaffold7854 Both SNP 0008.scaffold00029 181561 1 A G scaffold7854 Both SNP 0008.scaffold00029 181568 1 G T scaffold7854 Both SNP 0008.scaffold00029 181607 1 A C scaffold7854 ScafM INDEL 0008.scaffold00029 181626 1 . T scaffold7854 ScafM SNP 0008.scaffold00029 181628 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 181636 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 181648 1 T A scaffold7854 Both SNP 0008.scaffold00029 181669 1 A G scaffold7854 Both SNP 0008.scaffold00029 181691 1 G A scaffold7854 Both SNP 0008.scaffold00029 181768 1 C T scaffold7854 Both SNP 0008.scaffold00029 181998 1 A C scaffold7854 Both SNP 0008.scaffold00029 182187 1 G C scaffold7854 Both SNP 0008.scaffold00029 182244 1 C G scaffold7854 Both SNP 0008.scaffold00029 182252 1 C A scaffold7854 Both SNP 0008.scaffold00029 182309 1 C T scaffold7854 Both SNP 0008.scaffold00029 182320 1 C T scaffold7854 Both SNP 0008.scaffold00029 182363 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 182390 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 182407 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 182409 2 TC .. scaffold7854 ScafM SNP 0008.scaffold00029 182412 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 182418 5 AGATC ..... scaffold7854 ScafM SNP 0008.scaffold00029 182466 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 182511 8 TGGGGGGG ........ scaffold7854 ScafM INDEL 0008.scaffold00029 182525 7 GGTGGGG ....... scaffold7854 ScafM INDEL 0008.scaffold00029 182533 1 G . scaffold7854 ScafM INDEL 0008.scaffold00029 182618 2 .. CT scaffold7854 ScafM SNP 0008.scaffold00029 182639 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 182642 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 182648 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 182669 2 .. TA scaffold7854 ScafM SNP 0008.scaffold00029 182705 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 182711 1 C T scaffold7854 Both SNP 0008.scaffold00029 182908 1 G A scaffold7854 Both INDEL 0008.scaffold00029 182913 2 .. AA scaffold7854 ScafM INDEL 0008.scaffold00029 182982 2 AT .. scaffold7854 ScafM INDEL 0008.scaffold00029 182990 3 ... CCC scaffold7854 Both SNP 0008.scaffold00029 183066 1 T A scaffold7854 Both SNP 0008.scaffold00029 183090 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 183105 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 183111 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 183120 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 183137 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 183158 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 183163 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 183171 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 183182 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 183211 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 183214 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 183222 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 183226 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 183228 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 183230 1 G A scaffold7854 Both SNP 0008.scaffold00029 183334 1 C T scaffold7854 Both SNP 0008.scaffold00029 183618 1 T A scaffold7854 Both SNP 0008.scaffold00029 183652 1 G T scaffold7854 Both SNP 0008.scaffold00029 183665 1 T C scaffold7854 Both SNP 0008.scaffold00029 183722 1 T G scaffold7854 Both SNP 0008.scaffold00029 183746 1 T A scaffold7854 Both SNP 0008.scaffold00029 183784 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 183901 8 TATTTGAT ........ scaffold7854 ScafM SNP 0008.scaffold00029 184925 1 C T scaffold2147 ScafM SNP 0008.scaffold00029 184962 1 G C scaffold2147 Both SNP 0008.scaffold00029 186153 1 G A scaffold7854 Both SNP 0008.scaffold00029 186326 1 C G scaffold7854 Both SNP 0008.scaffold00029 186342 1 C T scaffold7854 Both SNP 0008.scaffold00029 186416 1 A G scaffold7854 ReadM SNP 0008.scaffold00029 186707 1 T C - ReadM SNP 0008.scaffold00029 186787 1 C T - ReadM SNP 0008.scaffold00029 186918 1 G A - ReadM SNP 0008.scaffold00029 187084 1 G A - ReadM SNP 0008.scaffold00029 187226 1 C G - ReadM SNP 0008.scaffold00029 187353 1 A C - ReadM SNP 0008.scaffold00029 187396 1 A G - ReadM SNP 0008.scaffold00029 187500 1 T C - ReadM SNP 0008.scaffold00029 187675 1 C T - ReadM SNP 0008.scaffold00029 187854 1 G T - ReadM SNP 0008.scaffold00029 187883 1 A T - ReadM SNP 0008.scaffold00029 188035 1 G C - ReadM SNP 0008.scaffold00029 188243 1 G A - ReadM SNP 0008.scaffold00029 188305 1 G A - ReadM INDEL 0008.scaffold00029 188320 1 A . - ReadM SNP 0008.scaffold00029 188676 1 C T - ReadM SNP 0008.scaffold00029 188923 1 A C - ReadM SNP 0008.scaffold00029 189304 1 G A - Both SNP 0008.scaffold00029 189494 1 C T scaffold7854 Both SNP 0008.scaffold00029 189526 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 189562 1 G A scaffold7854 ReadM INDEL 0008.scaffold00029 189723 1 A . - ReadM SNP 0008.scaffold00029 190010 1 C T - Both SNP 0008.scaffold00029 190177 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 190224 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 190226 1 A T scaffold7854 ScafM INDEL 0008.scaffold00029 190512 4 .... AAAA scaffold7854 ScafM SNP 0008.scaffold00029 190513 1 C A scaffold7854 ScafM INDEL 0008.scaffold00029 191052 3 ... AAA scaffold7854 ScafM INDEL 0008.scaffold00029 191069 1 . G scaffold7854 ScafM SNP 0008.scaffold00029 191073 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 191204 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 191286 8 GCCATATG ........ scaffold7854 ScafM SNP 0008.scaffold00029 191538 1 C T scaffold7854 ReadM SNP 0008.scaffold00029 193195 1 G T - ReadM SNP 0008.scaffold00029 193233 1 C T - ReadM SNP 0008.scaffold00029 193329 1 A G - ReadM SNP 0008.scaffold00029 193452 1 A T - ReadM SNP 0008.scaffold00029 193459 1 T A - Both SNP 0008.scaffold00029 193696 1 A T scaffold7854 Both INDEL 0008.scaffold00029 193726 2 .. TC scaffold7854 ReadM INDEL 0008.scaffold00029 193727 1 . C - ReadM INDEL 0008.scaffold00029 194064 1 T . - ReadM SNP 0008.scaffold00029 194169 1 A C - ReadM SNP 0008.scaffold00029 194265 1 T C - ReadM SNP 0008.scaffold00029 194414 1 A C - ReadM SNP 0008.scaffold00029 194427 1 G A - ReadM SNP 0008.scaffold00029 194473 1 A C - ReadM SNP 0008.scaffold00029 195086 1 T C - ReadM SNP 0008.scaffold00029 195148 1 C T - ReadM SNP 0008.scaffold00029 195467 1 C T - ReadM SNP 0008.scaffold00029 195592 1 G A - Both SNP 0008.scaffold00029 195645 1 C A scaffold7854 Both SNP 0008.scaffold00029 195651 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 195721 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 195723 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 195776 2 CC TT scaffold7854 Both SNP 0008.scaffold00029 195859 1 A C scaffold7854 Both SNP 0008.scaffold00029 195925 1 T A scaffold7854 Both SNP 0008.scaffold00029 196027 1 T C scaffold7854 Both SNP 0008.scaffold00029 196070 1 A G scaffold7854 Both SNP 0008.scaffold00029 196097 1 A T scaffold7854 ReadM SNP 0008.scaffold00029 196387 1 T A - ReadM SNP 0008.scaffold00029 197971 1 T G - ReadM SNP 0008.scaffold00029 198286 1 T A - ReadM SNP 0008.scaffold00029 198459 1 C T - ReadM SNP 0008.scaffold00029 198503 1 A G - ReadM SNP 0008.scaffold00029 198514 1 T A - ReadM SNP 0008.scaffold00029 198795 1 A T - ReadM SNP 0008.scaffold00029 199156 1 A G - ReadM SNP 0008.scaffold00029 199189 1 A G - ReadM SNP 0008.scaffold00029 199205 1 G A - ReadM SNP 0008.scaffold00029 199325 1 A T - ScafM INDEL 0008.scaffold00029 199437 6 ...... ATTATC scaffold7854 ScafM SNP 0008.scaffold00029 199951 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 200344 1 T A scaffold7854 ScafM SNP 0008.scaffold00029 200514 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 200546 1 C G scaffold7854 ScafM INDEL 0008.scaffold00029 200582 3 AGT ... scaffold7854 ScafM INDEL 0008.scaffold00029 200619 1 T . scaffold7854 ScafM INDEL 0008.scaffold00029 200656 3 ... ATA scaffold7854 Both INDEL 0008.scaffold00029 200711 1 A . scaffold7854 Both INDEL 0008.scaffold00029 200813 3 ... CAT scaffold7854 Both SNP 0008.scaffold00029 200877 1 G C scaffold7854 Both SNP 0008.scaffold00029 200905 1 A G scaffold7854 Both SNP 0008.scaffold00029 201229 1 G A scaffold7854 ScafM INDEL 0008.scaffold00029 201238 3 ... TAT scaffold7854 Both SNP 0008.scaffold00029 201393 1 G T scaffold7854 Both SNP 0008.scaffold00029 201417 1 G T scaffold7854 Both SNP 0008.scaffold00029 201420 1 A G scaffold7854 Both SNP 0008.scaffold00029 201543 1 T C scaffold7854 Both SNP 0008.scaffold00029 201642 1 T A scaffold7854 Both SNP 0008.scaffold00029 201701 1 T A scaffold7854 Both SNP 0008.scaffold00029 201755 1 T A scaffold7854 Both SNP 0008.scaffold00029 201920 1 T A scaffold7854 Both INDEL 0008.scaffold00029 201987 2 .. TG scaffold7854 ReadM INDEL 0008.scaffold00029 201988 2 .. GC - Both SNP 0008.scaffold00029 202109 1 A C scaffold7854 Both SNP 0008.scaffold00029 202131 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202171 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202177 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 202190 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 202206 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202212 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202219 1 T C scaffold7854 ScafM INDEL 0008.scaffold00029 202224 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 202226 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 202230 6 ACTTTT ...... scaffold7854 ScafM SNP 0008.scaffold00029 202238 1 A G scaffold7854 ScafM INDEL 0008.scaffold00029 202243 2 TG .. scaffold7854 ScafM INDEL 0008.scaffold00029 202247 1 T . scaffold7854 ScafM INDEL 0008.scaffold00029 202249 2 AA .. scaffold7854 ScafM INDEL 0008.scaffold00029 202254 5 TACAT ..... scaffold7854 ScafM INDEL 0008.scaffold00029 202261 1 A . scaffold7854 ScafM INDEL 0008.scaffold00029 202263 2 CT .. scaffold7854 ScafM INDEL 0008.scaffold00029 202267 4 TAAA .... scaffold7854 ScafM INDEL 0008.scaffold00029 202274 1 G . scaffold7854 ScafM INDEL 0008.scaffold00029 202277 5 CTGAT ..... scaffold7854 ScafM INDEL 0008.scaffold00029 202283 3 CGA ... scaffold7854 ScafM INDEL 0008.scaffold00029 202289 2 CC .. scaffold7854 ScafM INDEL 0008.scaffold00029 202292 4 ACTT .... scaffold7854 ScafM INDEL 0008.scaffold00029 202297 7 AAACCAA ....... scaffold7854 ScafM INDEL 0008.scaffold00029 202306 2 AA .. scaffold7854 ScafM INDEL 0008.scaffold00029 202310 4 CCCG .... scaffold7854 ScafM SNP 0008.scaffold00029 202321 2 CC TT scaffold7854 ScafM SNP 0008.scaffold00029 202331 1 G T scaffold7854 ScafM INDEL 0008.scaffold00029 202338 3 ... AAT scaffold7854 ScafM SNP 0008.scaffold00029 202342 3 TTG CCA scaffold7854 ScafM SNP 0008.scaffold00029 202389 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 202404 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202416 2 CG AA scaffold7854 ScafM SNP 0008.scaffold00029 202425 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202432 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202449 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 202456 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 202477 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 202487 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202501 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202507 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 202521 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202533 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 202544 1 A C scaffold7854 ScafM SNP 0008.scaffold00029 202560 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202608 2 CG AT scaffold7854 ScafM SNP 0008.scaffold00029 202684 1 T G scaffold7854 ScafM SNP 0008.scaffold00029 202699 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202736 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 202766 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 202801 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 202813 5 ..... TTGAC scaffold7854 ScafM SNP 0008.scaffold00029 202816 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 202821 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 202830 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 202875 1 C A scaffold7854 ScafM SNP 0008.scaffold00029 202940 1 T C scaffold7854 ScafM SNP 0008.scaffold00029 202979 2 AT CC scaffold7854 ScafM SNP 0008.scaffold00029 203115 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 203137 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203176 1 C T scaffold7854 ScafM INDEL 0008.scaffold00029 203186 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 203321 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 203322 1 . G scaffold7854 ScafM INDEL 0008.scaffold00029 203323 1 . T scaffold7854 ScafM INDEL 0008.scaffold00029 203325 2 .. AT scaffold7854 ScafM SNP 0008.scaffold00029 203346 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203409 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 203417 1 G A scaffold7854 ScafM SNP 0008.scaffold00029 203432 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 203436 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 203465 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203479 1 A T scaffold7854 ScafM SNP 0008.scaffold00029 203485 1 C G scaffold7854 ScafM SNP 0008.scaffold00029 203505 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 203523 1 A G scaffold7854 ScafM SNP 0008.scaffold00029 203529 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203542 1 G C scaffold7854 ScafM SNP 0008.scaffold00029 203545 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203571 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203578 1 T G scaffold7854 ScafM INDEL 0008.scaffold00029 203601 31 CCCAACCCAGCAAGACTTTACGTCAGCGAGA ............................... scaffold7854 ScafM INDEL 0008.scaffold00029 203665 7 ACTAGAG ....... scaffold7854 ScafM SNP 0008.scaffold00029 203696 2 TT CA scaffold7854 ScafM SNP 0008.scaffold00029 203728 2 AA CG scaffold7854 ScafM SNP 0008.scaffold00029 203749 1 G T scaffold7854 ScafM SNP 0008.scaffold00029 203758 1 C T scaffold7854 ScafM SNP 0008.scaffold00029 203760 1 A G scaffold7854 Both SNP 0008.scaffold00029 203825 1 A C scaffold7854 Both SNP 0008.scaffold00029 203844 1 T G scaffold7854 ReadM SNP 0008.scaffold00029 204999 1 T C - ReadM SNP 0008.scaffold00029 205006 1 C T - ReadM SNP 0008.scaffold00029 205056 1 A G - ReadM SNP 0008.scaffold00029 205427 1 T G - ReadM SNP 0008.scaffold00029 205445 1 C T - ReadM SNP 0008.scaffold00029 205909 1 G A - ReadM SNP 0008.scaffold00029 205934 1 T G - ReadM SNP 0008.scaffold00029 206175 1 G A - ReadM SNP 0008.scaffold00029 206204 1 G A - ScafM SNP 0008.scaffold00029 217158 2 CG TA scaffold6587 ScafM SNP 0008.scaffold00029 217167 1 A G scaffold6587 ScafM SNP 0008.scaffold00029 217177 1 C G scaffold6587 ScafM SNP 0008.scaffold00029 217192 1 G T scaffold6587 ScafM SNP 0008.scaffold00029 217218 1 T C scaffold6587 ScafM SNP 0008.scaffold00029 217259 1 T C scaffold6587 ScafM SNP 0008.scaffold00029 217287 1 C G scaffold6587 ScafM SNP 0008.scaffold00029 217292 1 T C scaffold6587 ScafM SNP 0008.scaffold00029 217312 1 A G scaffold6587 ScafM SNP 0008.scaffold00029 217320 1 T C scaffold6587 ScafM SNP 0008.scaffold00029 217328 1 A G scaffold6587 ScafM SNP 0008.scaffold00029 220668 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 220674 1 A T scaffold18888 ScafM SNP 0008.scaffold00029 220688 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 220691 2 CT TA scaffold18888 ScafM INDEL 0008.scaffold00029 220696 2 .A GT scaffold18888 ScafM SNP 0008.scaffold00029 220702 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 220739 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 220750 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 220760 2 AT GG scaffold18888 ScafM SNP 0008.scaffold00029 220764 1 C G scaffold18888 ScafM SNP 0008.scaffold00029 220775 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 220829 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 220842 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 220858 1 G C scaffold18888 ScafM SNP 0008.scaffold00029 220896 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 220898 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 220917 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 220923 1 G A scaffold18888 ScafM INDEL 0008.scaffold00029 220934 1 A . scaffold18888 ScafM SNP 0008.scaffold00029 220940 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 220953 1 T C scaffold18888 ScafM INDEL 0008.scaffold00029 220991 2 AA .. scaffold18888 ScafM SNP 0008.scaffold00029 220998 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221003 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 221008 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221010 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 221025 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221027 1 C G scaffold18888 ScafM SNP 0008.scaffold00029 221046 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 221064 1 T C scaffold18888 ScafM INDEL 0008.scaffold00029 221066 2 .. AG scaffold18888 ScafM INDEL 0008.scaffold00029 221068 10 .......... GCTCAAAGCA scaffold18888 ScafM SNP 0008.scaffold00029 221074 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221077 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221083 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221086 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221096 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221132 1 A C scaffold18888 ScafM SNP 0008.scaffold00029 221138 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221156 2 GG AA scaffold18888 ScafM SNP 0008.scaffold00029 221181 1 C A scaffold18888 ScafM SNP 0008.scaffold00029 221197 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221348 1 C G scaffold18888 ScafM SNP 0008.scaffold00029 221377 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 221379 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221382 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221398 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 221408 1 T C scaffold18888 ScafM INDEL 0008.scaffold00029 221417 13 CGATATAATACAA ............. scaffold18888 ScafM SNP 0008.scaffold00029 221443 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221451 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 221479 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221485 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221529 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221531 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 221536 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221561 1 A C scaffold18888 ScafM SNP 0008.scaffold00029 221582 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221584 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221610 1 C T scaffold18888 ScafM INDEL 0008.scaffold00029 221659 1 . C scaffold18888 ScafM SNP 0008.scaffold00029 221677 2 TT CG scaffold18888 ScafM SNP 0008.scaffold00029 221685 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 221695 1 C T scaffold18888 ScafM INDEL 0008.scaffold00029 221702 1 A . scaffold18888 ScafM SNP 0008.scaffold00029 221713 1 G T scaffold18888 ScafM SNP 0008.scaffold00029 221752 1 A G scaffold18888 ScafM INDEL 0008.scaffold00029 221767 1 . A scaffold18888 ScafM SNP 0008.scaffold00029 221782 2 CA TG scaffold18888 ScafM SNP 0008.scaffold00029 221800 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 221806 1 G T scaffold18888 ScafM SNP 0008.scaffold00029 221811 2 CA AG scaffold18888 ScafM SNP 0008.scaffold00029 221840 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 221923 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221926 2 AT TG scaffold18888 ScafM SNP 0008.scaffold00029 221936 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 221955 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 221966 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221972 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 221974 1 A G scaffold18888 ScafM INDEL 0008.scaffold00029 221992 1 T . scaffold18888 ScafM SNP 0008.scaffold00029 222001 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 222020 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 222023 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 222025 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 222032 1 T A scaffold18888 ScafM INDEL 0008.scaffold00029 222040 1 T . scaffold18888 ScafM SNP 0008.scaffold00029 222233 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 222274 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 222320 1 A C scaffold18888 ScafM SNP 0008.scaffold00029 222323 1 G T scaffold18888 ScafM SNP 0008.scaffold00029 222327 1 A T scaffold18888 ScafM SNP 0008.scaffold00029 222353 1 C A scaffold18888 ScafM INDEL 0008.scaffold00029 222358 1 . T scaffold18888 ScafM SNP 0008.scaffold00029 222367 1 A C scaffold18888 ScafM SNP 0008.scaffold00029 222370 1 G T scaffold18888 ScafM SNP 0008.scaffold00029 222919 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 222935 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 222947 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 222951 1 C A scaffold18888 ScafM SNP 0008.scaffold00029 222990 1 T C scaffold18888 ScafM INDEL 0008.scaffold00029 223000 1 . T scaffold18888 ScafM SNP 0008.scaffold00029 223006 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 223035 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 223046 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 223048 1 C T scaffold18888 ScafM INDEL 0008.scaffold00029 225036 1 . A scaffold18888 ScafM SNP 0008.scaffold00029 225471 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 225474 1 C T scaffold18888 Both SNP 0008.scaffold00029 225508 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 225531 1 C T scaffold18888 ScafM SNP 0008.scaffold00029 225544 1 A G scaffold18888 ScafM INDEL 0008.scaffold00029 225551 1 T . scaffold18888 ScafM SNP 0008.scaffold00029 225608 1 C A scaffold18888 ScafM SNP 0008.scaffold00029 225637 2 TG CC scaffold18888 ScafM SNP 0008.scaffold00029 225645 1 A T scaffold18888 ScafM SNP 0008.scaffold00029 225655 1 A T scaffold18888 ScafM SNP 0008.scaffold00029 225663 1 A G scaffold18888 Both SNP 0008.scaffold00029 225683 1 T C scaffold18888 Both SNP 0008.scaffold00029 225712 1 G T scaffold18888 Both INDEL 0008.scaffold00029 225808 1 . C scaffold18888 ScafM INDEL 0008.scaffold00029 225816 2 .. CG scaffold18888 Both SNP 0008.scaffold00029 225874 1 C T scaffold18888 Both INDEL 0008.scaffold00029 225878 1 A . scaffold18888 Both SNP 0008.scaffold00029 225934 1 G A scaffold18888 Both SNP 0008.scaffold00029 225959 1 T C scaffold18888 Both SNP 0008.scaffold00029 226165 1 G A scaffold18888 Both SNP 0008.scaffold00029 226171 1 G T scaffold18888 Both SNP 0008.scaffold00029 226207 1 T C scaffold18888 Both SNP 0008.scaffold00029 226246 1 T C scaffold18888 Both SNP 0008.scaffold00029 226540 1 G A scaffold18888 Both SNP 0008.scaffold00029 226762 1 C T scaffold18888 Both SNP 0008.scaffold00029 227396 1 T C scaffold18888 Both SNP 0008.scaffold00029 227526 1 A G scaffold18888 Both SNP 0008.scaffold00029 227701 1 G A scaffold18888 Both SNP 0008.scaffold00029 227734 1 C G scaffold18888 Both SNP 0008.scaffold00029 228056 1 C T scaffold18888 Both SNP 0008.scaffold00029 228367 1 T C scaffold18888 Both SNP 0008.scaffold00029 228403 1 G T scaffold18888 Both SNP 0008.scaffold00029 228418 1 T G scaffold18888 Both SNP 0008.scaffold00029 228470 1 A T scaffold18888 ScafM INDEL 0008.scaffold00029 229025 3 ... ATA scaffold18888 Both SNP 0008.scaffold00029 229050 1 T A scaffold18888 Both SNP 0008.scaffold00029 229374 1 G T scaffold18888 Both SNP 0008.scaffold00029 229934 1 G A scaffold18888 ScafM INDEL 0008.scaffold00029 230431 27 ........................... TCCTGACGTATATGAACGAGTGTGGTT scaffold18888 Both SNP 0008.scaffold00029 230608 1 C T scaffold18888 ReadM SNP 0008.scaffold00029 230672 1 C T - ReadM SNP 0008.scaffold00029 230690 1 G A - Both INDEL 0008.scaffold00029 230936 1 . A scaffold18888 ReadM INDEL 0008.scaffold00029 230953 1 T . - ReadM SNP 0008.scaffold00029 231162 1 T A - Both SNP 0008.scaffold00029 231198 1 C T scaffold18888 Both SNP 0008.scaffold00029 231462 1 T G scaffold18888 Both SNP 0008.scaffold00029 231574 1 T C scaffold18888 Both SNP 0008.scaffold00029 231607 1 C T scaffold18888 Both SNP 0008.scaffold00029 231636 1 A C scaffold18888 Both SNP 0008.scaffold00029 232027 1 A G scaffold18888 Both SNP 0008.scaffold00029 232576 1 T C scaffold18888 ScafM SNP 0008.scaffold00029 232767 1 G A scaffold18888 Both SNP 0008.scaffold00029 233046 1 G A scaffold18888 Both SNP 0008.scaffold00029 233069 1 A C scaffold18888 ReadM SNP 0008.scaffold00029 233171 1 C T - ScafM SNP 0008.scaffold00029 233551 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 233653 1 T G scaffold18888 Both SNP 0008.scaffold00029 233911 1 A C scaffold18888 Both SNP 0008.scaffold00029 233960 1 G A scaffold18888 Both SNP 0008.scaffold00029 233968 1 A G scaffold18888 Both SNP 0008.scaffold00029 233997 1 G A scaffold18888 ScafM INDEL 0008.scaffold00029 234022 3 AAA ... scaffold18888 ScafM INDEL 0008.scaffold00029 234026 3 AGA ... scaffold18888 ScafM SNP 0008.scaffold00029 234061 1 A G scaffold18888 ScafM SNP 0008.scaffold00029 234089 2 CT GG scaffold18888 ScafM SNP 0008.scaffold00029 234094 1 T C scaffold18888 Both SNP 0008.scaffold00029 234118 1 C T scaffold18888 Both SNP 0008.scaffold00029 234253 1 T C scaffold18888 Both SNP 0008.scaffold00029 234256 1 A G scaffold18888 Both SNP 0008.scaffold00029 234298 1 G A scaffold18888 ScafM SNP 0008.scaffold00029 234400 1 C T scaffold18888 Both SNP 0008.scaffold00029 234640 1 T C scaffold18888 Both SNP 0008.scaffold00029 234681 1 T G scaffold18888 Both SNP 0008.scaffold00029 234694 1 C T scaffold18888 Both SNP 0008.scaffold00029 234733 1 C T scaffold18888 Both SNP 0008.scaffold00029 234742 1 C A scaffold18888 Both SNP 0008.scaffold00029 234766 1 T C scaffold18888 Both SNP 0008.scaffold00029 234955 1 T C scaffold18888 Both SNP 0008.scaffold00029 234985 1 A T scaffold18888 ScafM INDEL 0008.scaffold00029 235484 3 ... GTT scaffold18888 ScafM INDEL 0008.scaffold00029 235564 1 . A scaffold18888 ScafM INDEL 0008.scaffold00029 235601 1 T . scaffold18888 ScafM SNP 0008.scaffold00029 235795 1 T A scaffold18888 ScafM SNP 0008.scaffold00029 235802 1 T G scaffold18888 ScafM SNP 0008.scaffold00029 236769 1 T C scaffold1335 ScafM SNP 0008.scaffold00029 236833 1 A C scaffold1335 ScafM SNP 0008.scaffold00029 236839 1 C G scaffold1335 ScafM SNP 0008.scaffold00029 236875 1 C T scaffold1335 ScafM INDEL 0008.scaffold00029 236890 1 . T scaffold1335 ScafM INDEL 0008.scaffold00029 236893 1 C . scaffold1335 ScafM SNP 0008.scaffold00029 236925 1 T G scaffold1335 ScafM SNP 0008.scaffold00029 240059 1 C T scaffold1335 ScafM SNP 0008.scaffold00029 240127 2 GG AA scaffold1335 ScafM SNP 0008.scaffold00029 240136 1 C G scaffold1335 ScafM INDEL 0008.scaffold00029 240198 2 TT .. scaffold1335 ScafM SNP 0008.scaffold00029 240400 1 A C scaffold1335 ScafM INDEL 0008.scaffold00029 240424 2 .. AA scaffold1335 ScafM SNP 0008.scaffold00029 240440 1 A G scaffold1335 ScafM SNP 0008.scaffold00029 240509 1 A G scaffold1335 Both SNP 0008.scaffold00029 240559 1 G T scaffold1335 Both SNP 0008.scaffold00029 240562 1 T A scaffold1335 Both SNP 0008.scaffold00029 240609 1 A T scaffold1335 ReadM SNP 0008.scaffold00029 240684 1 G A - ReadM SNP 0008.scaffold00029 240779 1 A G - ReadM SNP 0008.scaffold00029 240793 1 C T - ReadM INDEL 0008.scaffold00029 240823 1 . C - ScafM SNP 0008.scaffold00029 240901 4 GTTG AAAT scaffold1335 ScafM SNP 0008.scaffold00029 240932 1 A C scaffold1335 ScafM SNP 0008.scaffold00029 240944 1 G C scaffold1335 ScafM SNP 0008.scaffold00029 240954 1 A G scaffold1335 ScafM SNP 0008.scaffold00029 240959 1 G A scaffold1335 ScafM SNP 0008.scaffold00029 240978 1 C A scaffold1335 ScafM INDEL 0008.scaffold00029 240990 1 T . scaffold1335 ScafM INDEL 0008.scaffold00029 241000 1 . A scaffold1335 ScafM SNP 0008.scaffold00029 241008 2 TT AC scaffold1335 Both INDEL 0008.scaffold00029 241102 1 . G scaffold1335 Both INDEL 0008.scaffold00029 241164 1 . A scaffold1335 Both SNP 0008.scaffold00029 241201 1 T C scaffold1335 ScafM SNP 0008.scaffold00029 241234 1 A G scaffold1335 ScafM SNP 0008.scaffold00029 241261 1 G A scaffold1335 ScafM SNP 0008.scaffold00029 241516 1 A C scaffold7552 ScafM SNP 0008.scaffold00029 248167 1 G A scaffold7552 ReadM SNP 0008.scaffold00029 248706 1 T C - ReadM SNP 0008.scaffold00029 248734 1 A G - Both SNP 0008.scaffold00029 248771 1 C T scaffold7552 ScafM INDEL 0008.scaffold00029 248808 5 TGATC ..... scaffold7552 ScafM SNP 0008.scaffold00029 248824 1 G C scaffold7552 ScafM SNP 0008.scaffold00029 248836 1 G A scaffold7552 ReadM SNP 0008.scaffold00029 248947 1 C T - ReadM SNP 0008.scaffold00029 248954 1 T C - Both SNP 0008.scaffold00029 249006 1 T C scaffold7552 Both SNP 0008.scaffold00029 249042 1 A C scaffold7552 Both SNP 0008.scaffold00029 249076 1 A C scaffold7552 Both INDEL 0008.scaffold00029 249192 1 T . scaffold7552 Both SNP 0008.scaffold00029 249247 1 T C scaffold7552 Both INDEL 0008.scaffold00029 249262 1 T . scaffold7552 Both SNP 0008.scaffold00029 249393 1 A G scaffold7552 Both SNP 0008.scaffold00029 249395 1 T C scaffold7552 Both SNP 0008.scaffold00029 249454 1 A G scaffold7552 Both SNP 0008.scaffold00029 249480 1 C A scaffold7552 Both SNP 0008.scaffold00029 249547 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 249562 1 G A scaffold7552 ScafM INDEL 0008.scaffold00029 249565 1 A . scaffold7552 ScafM SNP 0008.scaffold00029 249592 1 G A scaffold7552 Both SNP 0008.scaffold00029 249650 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 249784 1 A T scaffold7552 ReadM SNP 0008.scaffold00029 249837 1 C T - ReadM SNP 0008.scaffold00029 249887 1 T A - Both SNP 0008.scaffold00029 249933 1 C T scaffold7552 Both SNP 0008.scaffold00029 250022 1 A G scaffold7552 Both SNP 0008.scaffold00029 250125 1 T C scaffold7552 ReadM SNP 0008.scaffold00029 250238 1 C G - ReadM SNP 0008.scaffold00029 250271 1 C T - Both SNP 0008.scaffold00029 250480 1 A G scaffold7552 Both SNP 0008.scaffold00029 250533 1 A G scaffold7552 Both SNP 0008.scaffold00029 250607 1 C T scaffold7552 Both SNP 0008.scaffold00029 250621 1 A G scaffold7552 Both SNP 0008.scaffold00029 250696 1 T C scaffold7552 Both SNP 0008.scaffold00029 250700 1 A G scaffold7552 Both SNP 0008.scaffold00029 250771 1 C A scaffold7552 Both SNP 0008.scaffold00029 250815 1 T C scaffold7552 Both SNP 0008.scaffold00029 250859 1 C A scaffold7552 ScafM SNP 0008.scaffold00029 250913 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 250916 1 G A scaffold7552 ReadM SNP 0008.scaffold00029 251073 1 A G - ReadM SNP 0008.scaffold00029 251076 1 T G - ReadM SNP 0008.scaffold00029 251122 1 T A - ReadM SNP 0008.scaffold00029 251139 1 G T - ReadM SNP 0008.scaffold00029 251184 1 C G - ScafM SNP 0008.scaffold00029 251308 1 G C scaffold7552 ReadM SNP 0008.scaffold00029 251381 1 A G - Both SNP 0008.scaffold00029 251726 1 T A scaffold7552 Both SNP 0008.scaffold00029 251754 1 C A scaffold7552 ScafM SNP 0008.scaffold00029 251884 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 251974 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 252023 1 G . scaffold7552 ScafM SNP 0008.scaffold00029 252079 1 C G scaffold7552 ScafM SNP 0008.scaffold00029 252086 1 C A scaffold7552 ScafM INDEL 0008.scaffold00029 252147 1 . A scaffold7552 ScafM SNP 0008.scaffold00029 252159 1 C G scaffold7552 ScafM SNP 0008.scaffold00029 252175 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 252945 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 253257 1 C T scaffold7552 Both SNP 0008.scaffold00029 253328 1 T G scaffold7552 Both INDEL 0008.scaffold00029 253338 1 T . scaffold7552 Both SNP 0008.scaffold00029 253353 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 253418 1 A G scaffold7552 ScafM INDEL 0008.scaffold00029 253560 24 ........................ AGTTCAAATTTTCTTTGTGATAAA scaffold7552 ScafM SNP 0008.scaffold00029 253576 1 T A scaffold7552 ScafM SNP 0008.scaffold00029 253673 1 G A scaffold7552 ScafM INDEL 0008.scaffold00029 253875 1 C . scaffold7552 ScafM SNP 0008.scaffold00029 253878 1 A G scaffold7552 ScafM INDEL 0008.scaffold00029 253880 2 GG .T scaffold7552 ScafM INDEL 0008.scaffold00029 253884 2 .. TT scaffold7552 ScafM SNP 0008.scaffold00029 253887 1 T A scaffold7552 ScafM INDEL 0008.scaffold00029 253891 1 G . scaffold7552 ScafM SNP 0008.scaffold00029 253894 1 C T scaffold7552 ScafM INDEL 0008.scaffold00029 253895 4 .ATT TGGC scaffold7552 ScafM INDEL 0008.scaffold00029 253903 1 C . scaffold7552 ScafM INDEL 0008.scaffold00029 253906 3 ATG ... scaffold7552 ScafM SNP 0008.scaffold00029 253911 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 253929 1 T G scaffold7552 ReadM SNP 0008.scaffold00029 254083 1 A T - ReadM SNP 0008.scaffold00029 254093 1 G A - ReadM SNP 0008.scaffold00029 254160 1 C G - ReadM SNP 0008.scaffold00029 254204 1 C G - ReadM SNP 0008.scaffold00029 254266 1 A G - Both SNP 0008.scaffold00029 254517 2 TC GA scaffold7552 Both SNP 0008.scaffold00029 254554 1 A C scaffold7552 Both INDEL 0008.scaffold00029 254607 1 . A scaffold7552 ScafM SNP 0008.scaffold00029 254611 1 C A scaffold7552 ScafM SNP 0008.scaffold00029 254677 1 A G scaffold7552 Both SNP 0008.scaffold00029 254980 1 A G scaffold7552 Both SNP 0008.scaffold00029 255079 1 G A scaffold7552 Both SNP 0008.scaffold00029 255641 1 A G scaffold7552 Both INDEL 0008.scaffold00029 255709 1 . T scaffold7552 Both INDEL 0008.scaffold00029 255761 1 A . scaffold7552 ScafM SNP 0008.scaffold00029 255832 1 A G scaffold7552 Both INDEL 0008.scaffold00029 255927 1 . T scaffold7552 Both SNP 0008.scaffold00029 256223 1 T C scaffold7552 Both SNP 0008.scaffold00029 256260 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 256330 1 A T scaffold7552 Both SNP 0008.scaffold00029 256423 1 C A scaffold7552 Both SNP 0008.scaffold00029 256430 1 G A scaffold7552 ReadM SNP 0008.scaffold00029 256533 1 C G - ReadM INDEL 0008.scaffold00029 257066 3 CAA ... - ReadM SNP 0008.scaffold00029 257347 1 C T - ReadM SNP 0008.scaffold00029 259408 1 G T - ReadM SNP 0008.scaffold00029 259641 1 C T - ReadM INDEL 0008.scaffold00029 259751 1 T . - Both SNP 0008.scaffold00029 260546 1 G A scaffold7552 ReadM SNP 0008.scaffold00029 260702 1 A G - Both SNP 0008.scaffold00029 261069 1 T C scaffold7552 Both INDEL 0008.scaffold00029 261106 1 . A scaffold7552 ReadM SNP 0008.scaffold00029 261257 1 C T - ReadM SNP 0008.scaffold00029 261265 1 A G - Both SNP 0008.scaffold00029 261627 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 261656 4 .... CTCT scaffold7552 Both SNP 0008.scaffold00029 261763 1 A G scaffold7552 Both SNP 0008.scaffold00029 261799 1 C T scaffold7552 Both SNP 0008.scaffold00029 262750 1 T C scaffold7552 ReadM SNP 0008.scaffold00029 262906 1 C A - ReadM SNP 0008.scaffold00029 262955 1 A G - ReadM SNP 0008.scaffold00029 263252 1 T C - ReadM SNP 0008.scaffold00029 263518 1 T A - ReadM SNP 0008.scaffold00029 263666 1 C T - ReadM SNP 0008.scaffold00029 263839 1 A G - ReadM SNP 0008.scaffold00029 264192 1 G A - ReadM SNP 0008.scaffold00029 264279 1 T C - Both SNP 0008.scaffold00029 264320 1 A G scaffold7552 ScafM INDEL 0008.scaffold00029 264372 4 .... ACTT scaffold7552 ScafM INDEL 0008.scaffold00029 264416 1 T . scaffold7552 Both SNP 0008.scaffold00029 264811 1 G A scaffold7552 Both SNP 0008.scaffold00029 265872 1 C T scaffold7552 ReadM SNP 0008.scaffold00029 265947 1 C A - Both SNP 0008.scaffold00029 266120 1 G A scaffold7552 Both SNP 0008.scaffold00029 266456 1 A T scaffold7552 ScafM SNP 0008.scaffold00029 267628 1 C T scaffold7552 Both SNP 0008.scaffold00029 267994 1 A C scaffold7552 Both SNP 0008.scaffold00029 268781 1 G A scaffold7552 Both SNP 0008.scaffold00029 269036 1 T C scaffold7552 Both SNP 0008.scaffold00029 269115 1 T C scaffold7552 Both SNP 0008.scaffold00029 269319 1 G A scaffold7552 ReadM INDEL 0008.scaffold00029 269941 1 . C - ReadM SNP 0008.scaffold00029 269958 1 G T - Both SNP 0008.scaffold00029 270365 1 C G scaffold7552 Both SNP 0008.scaffold00029 271199 1 C T scaffold7552 Both SNP 0008.scaffold00029 271563 1 A G scaffold7552 Both INDEL 0008.scaffold00029 272237 1 . A scaffold7552 Both SNP 0008.scaffold00029 272621 1 C T scaffold7552 Both SNP 0008.scaffold00029 272883 1 C T scaffold7552 Both SNP 0008.scaffold00029 272896 1 C T scaffold7552 Both SNP 0008.scaffold00029 273008 1 T C scaffold7552 Both SNP 0008.scaffold00029 273159 1 G C scaffold7552 Both SNP 0008.scaffold00029 273197 1 G A scaffold7552 Both SNP 0008.scaffold00029 273274 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 274028 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 274361 1 T C scaffold7552 Both INDEL 0008.scaffold00029 275075 1 . T scaffold7552 Both SNP 0008.scaffold00029 275580 1 A G scaffold7552 Both SNP 0008.scaffold00029 275739 1 A C scaffold7552 Both SNP 0008.scaffold00029 275765 1 T A scaffold7552 Both SNP 0008.scaffold00029 275852 1 G A scaffold7552 Both INDEL 0008.scaffold00029 277280 1 G . scaffold7552 Both SNP 0008.scaffold00029 277719 1 C G scaffold7552 Both SNP 0008.scaffold00029 278237 1 A G scaffold7552 ReadM SNP 0008.scaffold00029 278807 2 CC AT - Both SNP 0008.scaffold00029 278868 1 G T scaffold7552 ReadM SNP 0008.scaffold00029 279472 1 T G - Both INDEL 0008.scaffold00029 279888 1 . C scaffold7552 Both SNP 0008.scaffold00029 280118 1 T G scaffold7552 ReadM SNP 0008.scaffold00029 281084 1 C T - ReadM SNP 0008.scaffold00029 281137 1 G T - ReadM SNP 0008.scaffold00029 281174 1 C T - ReadM SNP 0008.scaffold00029 281952 1 C G - ReadM SNP 0008.scaffold00029 282846 2 TT CC - ReadM SNP 0008.scaffold00029 283071 1 C T - ReadM SNP 0008.scaffold00029 283783 1 G C - ReadM INDEL 0008.scaffold00029 283855 1 . T - ReadM SNP 0008.scaffold00029 284127 1 T C - ReadM SNP 0008.scaffold00029 284403 1 A G - ReadM INDEL 0008.scaffold00029 284828 1 A . - ReadM SNP 0008.scaffold00029 284859 1 A G - Both SNP 0008.scaffold00029 284918 1 C A scaffold7552 Both SNP 0008.scaffold00029 285084 1 G A scaffold7552 Both INDEL 0008.scaffold00029 285189 1 A . scaffold7552 Both SNP 0008.scaffold00029 285215 1 T C scaffold7552 ReadM SNP 0008.scaffold00029 285345 1 A C - Both SNP 0008.scaffold00029 285421 1 A T scaffold7552 Both SNP 0008.scaffold00029 285428 1 T G scaffold7552 ReadM SNP 0008.scaffold00029 285687 1 C T - ReadM SNP 0008.scaffold00029 285741 1 C T - ReadM SNP 0008.scaffold00029 285982 1 T G - ReadM SNP 0008.scaffold00029 285998 1 T A - ReadM INDEL 0008.scaffold00029 286102 1 C . - ReadM SNP 0008.scaffold00029 286214 1 C T - ReadM SNP 0008.scaffold00029 286322 1 C G - ReadM SNP 0008.scaffold00029 286414 1 T G - ReadM SNP 0008.scaffold00029 286980 1 G A - ReadM SNP 0008.scaffold00029 287071 1 G T - ReadM SNP 0008.scaffold00029 287075 1 A C - ReadM SNP 0008.scaffold00029 287296 1 A C - ReadM SNP 0008.scaffold00029 287448 1 G C - ReadM SNP 0008.scaffold00029 287566 1 C G - ReadM SNP 0008.scaffold00029 287642 1 A C - ReadM SNP 0008.scaffold00029 287837 1 G T - ReadM SNP 0008.scaffold00029 287865 1 T C - ReadM SNP 0008.scaffold00029 288037 1 T G - ReadM SNP 0008.scaffold00029 288229 1 T C - ReadM SNP 0008.scaffold00029 290093 1 C T - ReadM SNP 0008.scaffold00029 290203 1 C A - ReadM INDEL 0008.scaffold00029 290209 1 A . - ReadM SNP 0008.scaffold00029 290219 1 A C - ReadM SNP 0008.scaffold00029 290661 1 T C - ReadM SNP 0008.scaffold00029 291402 1 G A - ReadM SNP 0008.scaffold00029 291689 1 T A - ReadM SNP 0008.scaffold00029 291907 1 A G - Both SNP 0008.scaffold00029 292085 1 C A scaffold7552 Both SNP 0008.scaffold00029 292242 1 C A scaffold7552 Both SNP 0008.scaffold00029 292267 1 C G scaffold7552 Both SNP 0008.scaffold00029 292380 1 G A scaffold7552 Both SNP 0008.scaffold00029 292513 1 T C scaffold7552 ReadM SNP 0008.scaffold00029 292984 1 T C - ReadM SNP 0008.scaffold00029 293002 1 C T - ReadM SNP 0008.scaffold00029 293087 1 A G - ReadM SNP 0008.scaffold00029 293100 1 C T - ScafM SNP 0008.scaffold00029 293307 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 293496 1 T A scaffold7552 ReadM SNP 0008.scaffold00029 294012 1 A G - ReadM SNP 0008.scaffold00029 294549 1 A C - Both SNP 0008.scaffold00029 294689 1 C A scaffold7552 Both SNP 0008.scaffold00029 294715 1 C T scaffold7552 Both SNP 0008.scaffold00029 294837 2 TT AC scaffold7552 ScafM INDEL 0008.scaffold00029 294956 24 GAAAATTCTTTAGCAACTTCCTAG ........................ scaffold7552 Both SNP 0008.scaffold00029 295276 1 A T scaffold7552 Both SNP 0008.scaffold00029 295570 1 T A scaffold7552 ScafM SNP 0008.scaffold00029 295595 1 A C scaffold7552 ScafM SNP 0008.scaffold00029 295597 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 295604 1 A C scaffold7552 ScafM SNP 0008.scaffold00029 295610 1 A T scaffold7552 Both SNP 0008.scaffold00029 295620 1 C A scaffold7552 Both SNP 0008.scaffold00029 295837 1 G A scaffold7552 Both INDEL 0008.scaffold00029 296417 1 . T scaffold7552 Both SNP 0008.scaffold00029 296424 1 A G scaffold7552 Both SNP 0008.scaffold00029 296468 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 296845 1 G A scaffold7552 Both SNP 0008.scaffold00029 297112 1 A G scaffold7552 Both SNP 0008.scaffold00029 297195 1 A G scaffold7552 Both SNP 0008.scaffold00029 297211 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 297372 1 C T scaffold7552 ReadM INDEL 0008.scaffold00029 298459 1 . T - ReadM SNP 0008.scaffold00029 298535 1 C G - ReadM SNP 0008.scaffold00029 298788 1 A G - ReadM INDEL 0008.scaffold00029 298845 1 . T - ReadM SNP 0008.scaffold00029 298974 1 A G - ReadM SNP 0008.scaffold00029 298996 1 C T - ReadM SNP 0008.scaffold00029 301350 1 T C - Both SNP 0008.scaffold00029 301519 1 C T scaffold7552 Both SNP 0008.scaffold00029 302268 1 C T scaffold7552 Both SNP 0008.scaffold00029 302304 1 T C scaffold7552 Both SNP 0008.scaffold00029 302391 1 A G scaffold7552 Both SNP 0008.scaffold00029 302490 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 302553 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 302600 1 T A scaffold7552 ScafM SNP 0008.scaffold00029 302752 1 C G scaffold7552 ScafM SNP 0008.scaffold00029 302821 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 302842 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 302885 1 G C scaffold7552 ScafM SNP 0008.scaffold00029 302903 1 G T scaffold7552 ScafM SNP 0008.scaffold00029 302928 1 A T scaffold7552 ScafM SNP 0008.scaffold00029 302939 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 302945 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 302947 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 302957 1 T G scaffold7552 Both SNP 0008.scaffold00029 303865 1 A C scaffold7552 Both SNP 0008.scaffold00029 303897 1 C A scaffold7552 Both INDEL 0008.scaffold00029 303925 1 A . scaffold7552 Both SNP 0008.scaffold00029 303955 1 C G scaffold7552 Both SNP 0008.scaffold00029 303964 1 G A scaffold7552 Both INDEL 0008.scaffold00029 304002 1 . T scaffold7552 ScafM INDEL 0008.scaffold00029 304082 4 ATTT .... scaffold7552 ScafM SNP 0008.scaffold00029 304091 1 G A scaffold7552 Both SNP 0008.scaffold00029 304136 1 G A scaffold7552 Both SNP 0008.scaffold00029 304217 1 G T scaffold7552 Both SNP 0008.scaffold00029 304277 1 T A scaffold7552 Both SNP 0008.scaffold00029 304604 1 C A scaffold7552 Both INDEL 0008.scaffold00029 304663 1 T . scaffold7552 ScafM SNP 0008.scaffold00029 304784 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 304788 2 GT TG scaffold7552 ScafM SNP 0008.scaffold00029 304820 1 G A scaffold7552 Both SNP 0008.scaffold00029 304855 1 G T scaffold7552 Both SNP 0008.scaffold00029 305024 1 G A scaffold7552 Both SNP 0008.scaffold00029 305220 1 C T scaffold7552 Both SNP 0008.scaffold00029 305295 1 C T scaffold7552 Both SNP 0008.scaffold00029 305504 1 G A scaffold7552 Both SNP 0008.scaffold00029 305630 1 C T scaffold7552 Both SNP 0008.scaffold00029 305662 1 T A scaffold7552 ReadM INDEL 0008.scaffold00029 305900 1 G . - ReadM SNP 0008.scaffold00029 305950 1 G T - ReadM SNP 0008.scaffold00029 305979 1 C T - ReadM SNP 0008.scaffold00029 306044 1 C T - ReadM INDEL 0008.scaffold00029 306093 1 . A - ReadM SNP 0008.scaffold00029 306184 1 T C - ReadM SNP 0008.scaffold00029 306206 1 T G - ReadM SNP 0008.scaffold00029 306240 1 C G - ReadM INDEL 0008.scaffold00029 306283 1 . T - ReadM SNP 0008.scaffold00029 306418 1 T C - ReadM SNP 0008.scaffold00029 306496 1 G C - ReadM SNP 0008.scaffold00029 306506 1 T C - ReadM SNP 0008.scaffold00029 306573 1 C T - ReadM SNP 0008.scaffold00029 306581 1 C T - ReadM SNP 0008.scaffold00029 306584 1 T C - ReadM SNP 0008.scaffold00029 306706 1 G T - ReadM SNP 0008.scaffold00029 306750 1 A G - ReadM SNP 0008.scaffold00029 306822 1 C A - ReadM SNP 0008.scaffold00029 307041 1 A G - ReadM SNP 0008.scaffold00029 307083 1 A G - ReadM SNP 0008.scaffold00029 307174 1 G A - ReadM SNP 0008.scaffold00029 307292 1 C T - ReadM INDEL 0008.scaffold00029 307327 1 . T - ReadM SNP 0008.scaffold00029 307337 1 C G - ReadM SNP 0008.scaffold00029 307451 1 G A - ReadM SNP 0008.scaffold00029 307494 1 C T - ReadM SNP 0008.scaffold00029 307549 1 G A - ReadM SNP 0008.scaffold00029 307578 1 T C - ReadM SNP 0008.scaffold00029 307624 1 C T - ReadM SNP 0008.scaffold00029 307657 1 G A - ReadM SNP 0008.scaffold00029 307660 1 G A - ReadM SNP 0008.scaffold00029 307720 1 G A - ReadM SNP 0008.scaffold00029 307760 1 A G - Both SNP 0008.scaffold00029 307900 1 T C scaffold7552 Both SNP 0008.scaffold00029 307932 1 G T scaffold7552 Both SNP 0008.scaffold00029 307978 1 G C scaffold7552 Both SNP 0008.scaffold00029 308056 1 C T scaffold7552 Both INDEL 0008.scaffold00029 308073 1 T . scaffold7552 Both SNP 0008.scaffold00029 308105 1 G A scaffold7552 Both INDEL 0008.scaffold00029 308153 1 A . scaffold7552 Both SNP 0008.scaffold00029 308192 1 G A scaffold7552 Both INDEL 0008.scaffold00029 308265 2 .. TC scaffold7552 ReadM INDEL 0008.scaffold00029 308267 1 . T - Both SNP 0008.scaffold00029 308307 1 G C scaffold7552 Both SNP 0008.scaffold00029 308416 1 C A scaffold7552 Both SNP 0008.scaffold00029 308454 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 308604 1 T A scaffold7552 ScafM SNP 0008.scaffold00029 308606 1 C T scaffold7552 Both SNP 0008.scaffold00029 308619 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 308756 1 C A scaffold7552 ScafM SNP 0008.scaffold00029 308887 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 308901 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 308918 2 AG GA scaffold7552 ReadM SNP 0008.scaffold00029 310319 1 A G - ReadM SNP 0008.scaffold00029 310437 1 A T - ReadM SNP 0008.scaffold00029 310507 1 T G - ReadM INDEL 0008.scaffold00029 310627 1 . T - ReadM SNP 0008.scaffold00029 310681 1 A C - ReadM SNP 0008.scaffold00029 310690 1 G T - ReadM SNP 0008.scaffold00029 310749 1 G A - ReadM SNP 0008.scaffold00029 310754 1 G C - ReadM SNP 0008.scaffold00029 310804 1 G A - ReadM SNP 0008.scaffold00029 310861 1 T C - ReadM SNP 0008.scaffold00029 310985 1 A G - ReadM SNP 0008.scaffold00029 311035 1 G A - ReadM SNP 0008.scaffold00029 311081 1 A G - ReadM SNP 0008.scaffold00029 311116 1 C T - ReadM INDEL 0008.scaffold00029 311158 1 . C - ReadM SNP 0008.scaffold00029 311220 1 T C - ReadM SNP 0008.scaffold00029 311226 1 A T - ReadM SNP 0008.scaffold00029 311230 1 G A - ReadM SNP 0008.scaffold00029 311333 1 T C - ReadM SNP 0008.scaffold00029 311428 1 T C - ReadM SNP 0008.scaffold00029 311461 1 G A - ReadM SNP 0008.scaffold00029 311500 1 T C - ReadM SNP 0008.scaffold00029 311562 1 G C - ReadM SNP 0008.scaffold00029 311587 1 C T - ReadM SNP 0008.scaffold00029 311643 1 T C - ReadM SNP 0008.scaffold00029 311674 1 C A - ReadM SNP 0008.scaffold00029 311800 1 G A - ReadM SNP 0008.scaffold00029 311803 1 T C - Both SNP 0008.scaffold00029 311835 1 A T scaffold7552 Both SNP 0008.scaffold00029 311924 1 A C scaffold7552 Both SNP 0008.scaffold00029 311952 1 T G scaffold7552 Both SNP 0008.scaffold00029 311954 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 311988 1 C A scaffold7552 Both SNP 0008.scaffold00029 312008 1 T C scaffold7552 Both SNP 0008.scaffold00029 312018 1 C T scaffold7552 Both INDEL 0008.scaffold00029 312052 1 . T scaffold7552 Both SNP 0008.scaffold00029 312131 1 G A scaffold7552 Both INDEL 0008.scaffold00029 312173 1 T . scaffold7552 Both SNP 0008.scaffold00029 312185 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 312211 3 ... GCG scaffold7552 Both SNP 0008.scaffold00029 312326 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 312367 2 CG AT scaffold7552 ScafM SNP 0008.scaffold00029 312381 1 G T scaffold7552 Both SNP 0008.scaffold00029 312430 1 C T scaffold7552 Both SNP 0008.scaffold00029 312448 1 T C scaffold7552 Both SNP 0008.scaffold00029 312483 1 A G scaffold7552 ScafM INDEL 0008.scaffold00029 312571 3 GTT ... scaffold7552 ScafM SNP 0008.scaffold00029 312625 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 312633 1 A G scaffold7552 Both SNP 0008.scaffold00029 312648 1 A T scaffold7552 ScafM SNP 0008.scaffold00029 312685 2 AC GT scaffold7552 Both SNP 0008.scaffold00029 312741 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 312771 1 G C scaffold7552 Both SNP 0008.scaffold00029 313025 1 G A scaffold7552 Both SNP 0008.scaffold00029 313034 1 T A scaffold7552 Both SNP 0008.scaffold00029 313048 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 313097 1 A G scaffold7552 Both SNP 0008.scaffold00029 313113 1 A C scaffold7552 Both SNP 0008.scaffold00029 313132 1 A T scaffold7552 ReadM INDEL 0008.scaffold00029 313214 1 C . - ScafM INDEL 0008.scaffold00029 313214 2 CC .G scaffold7552 Both SNP 0008.scaffold00029 313326 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 313810 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 313816 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 313818 2 TT .. scaffold7552 ScafM INDEL 0008.scaffold00029 313842 1 . T scaffold7552 ScafM INDEL 0008.scaffold00029 313876 1 . A scaffold7552 ScafM SNP 0008.scaffold00029 313891 1 G A scaffold7552 Both SNP 0008.scaffold00029 314082 1 G A scaffold7552 Both SNP 0008.scaffold00029 314169 1 T C scaffold7552 Both SNP 0008.scaffold00029 314256 1 G C scaffold7552 Both SNP 0008.scaffold00029 314418 2 AT GG scaffold7552 Both SNP 0008.scaffold00029 314478 1 C T scaffold7552 Both SNP 0008.scaffold00029 314532 1 G T scaffold7552 Both SNP 0008.scaffold00029 314594 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 314646 3 ... ATT scaffold7552 Both SNP 0008.scaffold00029 314711 1 G A scaffold7552 Both SNP 0008.scaffold00029 314774 1 G A scaffold7552 Both INDEL 0008.scaffold00029 314864 1 . A scaffold7552 ScafM SNP 0008.scaffold00029 314945 1 G A scaffold7552 ScafM INDEL 0008.scaffold00029 314970 1 . T scaffold7552 ScafM SNP 0008.scaffold00029 314976 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 314982 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 315029 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 315061 1 A C scaffold7552 ScafM SNP 0008.scaffold00029 315419 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 315555 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 315576 1 G C scaffold7552 ScafM SNP 0008.scaffold00029 315589 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 315634 1 G C scaffold7552 ScafM SNP 0008.scaffold00029 315657 1 A G scaffold7552 ScafM INDEL 0008.scaffold00029 315815 1 A . scaffold7552 ScafM SNP 0008.scaffold00029 315864 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 316053 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 316115 1 T G scaffold7552 ReadM SNP 0008.scaffold00029 316699 1 C T - ReadM SNP 0008.scaffold00029 316859 1 A G - ReadM SNP 0008.scaffold00029 316865 1 G A - Both SNP 0008.scaffold00029 316971 1 T A scaffold7552 ScafM SNP 0008.scaffold00029 317064 1 T C scaffold7552 ScafM SNP 0008.scaffold00029 317106 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 317133 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 317145 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 317148 1 T C scaffold7552 ScafM INDEL 0008.scaffold00029 317244 4 .... GCAT scaffold7552 ScafM INDEL 0008.scaffold00029 317348 1 T . scaffold7552 ScafM INDEL 0008.scaffold00029 317373 1 . T scaffold7552 Both SNP 0008.scaffold00029 317412 1 A G scaffold7552 Both INDEL 0008.scaffold00029 317420 1 A . scaffold7552 Both SNP 0008.scaffold00029 317454 1 C A scaffold7552 ReadM SNP 0008.scaffold00029 317545 1 T C - ReadM SNP 0008.scaffold00029 317651 1 C A - ReadM SNP 0008.scaffold00029 317703 1 T C - ReadM SNP 0008.scaffold00029 317705 1 G A - ReadM SNP 0008.scaffold00029 317744 1 T C - ReadM SNP 0008.scaffold00029 317760 1 C T - ReadM SNP 0008.scaffold00029 317837 1 A G - ReadM SNP 0008.scaffold00029 317960 1 G A - ReadM SNP 0008.scaffold00029 317993 1 C G - ReadM SNP 0008.scaffold00029 318019 1 T G - ReadM SNP 0008.scaffold00029 318072 1 C A - ReadM SNP 0008.scaffold00029 318167 1 G T - ReadM SNP 0008.scaffold00029 318169 1 C T - ReadM SNP 0008.scaffold00029 318265 1 G A - ReadM SNP 0008.scaffold00029 318341 1 G A - ReadM SNP 0008.scaffold00029 318515 1 T C - ReadM SNP 0008.scaffold00029 318595 1 A C - ReadM SNP 0008.scaffold00029 318613 1 C T - ReadM SNP 0008.scaffold00029 318700 1 A G - ReadM SNP 0008.scaffold00029 318785 1 C T - ReadM SNP 0008.scaffold00029 318869 1 C T - ReadM SNP 0008.scaffold00029 318900 1 T C - ReadM INDEL 0008.scaffold00029 318940 1 . C - ReadM SNP 0008.scaffold00029 319012 1 A C - ReadM INDEL 0008.scaffold00029 319218 3 ... ACT - ReadM SNP 0008.scaffold00029 319301 1 A G - ReadM SNP 0008.scaffold00029 319329 1 T C - ReadM SNP 0008.scaffold00029 319369 1 A T - ReadM SNP 0008.scaffold00029 319408 1 T G - ReadM SNP 0008.scaffold00029 319480 1 A G - ReadM SNP 0008.scaffold00029 319539 1 T C - ReadM SNP 0008.scaffold00029 319605 1 T C - ReadM SNP 0008.scaffold00029 319675 1 T G - ReadM SNP 0008.scaffold00029 319696 1 C G - ReadM SNP 0008.scaffold00029 319741 1 A C - ReadM SNP 0008.scaffold00029 319753 1 A G - ReadM SNP 0008.scaffold00029 319801 1 T G - ReadM SNP 0008.scaffold00029 319862 1 G T - Both SNP 0008.scaffold00029 319886 1 T C scaffold7552 Both SNP 0008.scaffold00029 319960 1 C T scaffold7552 ReadM SNP 0008.scaffold00029 320019 1 C G - ReadM SNP 0008.scaffold00029 320047 1 A G - ReadM SNP 0008.scaffold00029 320072 1 A T - ReadM SNP 0008.scaffold00029 320127 1 G C - ReadM SNP 0008.scaffold00029 320172 1 T C - ReadM SNP 0008.scaffold00029 320189 1 T A - ReadM SNP 0008.scaffold00029 320299 1 A C - ReadM SNP 0008.scaffold00029 320333 1 C A - ReadM SNP 0008.scaffold00029 320398 1 T C - ReadM SNP 0008.scaffold00029 320438 1 A C - ReadM SNP 0008.scaffold00029 320460 1 T C - ReadM SNP 0008.scaffold00029 320519 1 C T - ReadM SNP 0008.scaffold00029 320572 1 A G - ReadM SNP 0008.scaffold00029 320579 1 G A - ReadM SNP 0008.scaffold00029 320612 1 T C - ReadM SNP 0008.scaffold00029 320637 1 G A - ReadM SNP 0008.scaffold00029 320779 1 T G - ReadM SNP 0008.scaffold00029 320807 1 G A - ReadM SNP 0008.scaffold00029 320893 1 C A - ReadM SNP 0008.scaffold00029 320943 1 A G - ReadM SNP 0008.scaffold00029 320950 1 C T - ReadM SNP 0008.scaffold00029 321029 1 C T - ReadM SNP 0008.scaffold00029 321115 1 A G - ReadM SNP 0008.scaffold00029 321140 1 A C - ReadM SNP 0008.scaffold00029 321331 1 A G - ReadM SNP 0008.scaffold00029 321518 1 G A - ReadM SNP 0008.scaffold00029 321544 1 G A - ReadM SNP 0008.scaffold00029 321602 1 A G - ReadM SNP 0008.scaffold00029 321697 1 A G - ReadM SNP 0008.scaffold00029 321707 1 G T - ReadM SNP 0008.scaffold00029 321734 1 A G - ReadM SNP 0008.scaffold00029 321827 1 G A - ReadM SNP 0008.scaffold00029 321943 1 G A - ReadM SNP 0008.scaffold00029 321980 1 A G - ReadM SNP 0008.scaffold00029 322031 1 C T - ReadM SNP 0008.scaffold00029 322142 1 G C - ReadM SNP 0008.scaffold00029 322187 1 A G - ReadM SNP 0008.scaffold00029 322283 1 G A - ReadM SNP 0008.scaffold00029 322300 1 G A - ReadM SNP 0008.scaffold00029 322493 1 G A - ReadM SNP 0008.scaffold00029 322519 1 A G - ReadM SNP 0008.scaffold00029 322586 1 G C - ReadM INDEL 0008.scaffold00029 322610 1 . G - ReadM SNP 0008.scaffold00029 322662 1 C T - ReadM SNP 0008.scaffold00029 322681 1 A T - ReadM SNP 0008.scaffold00029 322691 1 A G - ReadM SNP 0008.scaffold00029 322771 1 C G - ReadM SNP 0008.scaffold00029 322783 1 T G - Both SNP 0008.scaffold00029 322930 1 A G scaffold7552 Both SNP 0008.scaffold00029 322967 1 A G scaffold7552 ReadM SNP 0008.scaffold00029 323054 1 A G - ReadM SNP 0008.scaffold00029 323075 1 A C - ReadM SNP 0008.scaffold00029 323105 1 A G - ReadM SNP 0008.scaffold00029 325181 1 A G - ReadM SNP 0008.scaffold00029 325192 1 G T - ReadM SNP 0008.scaffold00029 325202 1 A C - ReadM SNP 0008.scaffold00029 325262 1 C T - ReadM SNP 0008.scaffold00029 325266 1 C G - ReadM SNP 0008.scaffold00029 325356 1 G A - ReadM SNP 0008.scaffold00029 325551 1 T C - ReadM SNP 0008.scaffold00029 325640 1 A G - ReadM SNP 0008.scaffold00029 325710 1 G A - ReadM SNP 0008.scaffold00029 325718 1 C T - ReadM SNP 0008.scaffold00029 325743 1 T A - ReadM SNP 0008.scaffold00029 325780 1 C G - ReadM SNP 0008.scaffold00029 325819 1 T A - ReadM SNP 0008.scaffold00029 325837 1 T C - ReadM SNP 0008.scaffold00029 325922 1 C T - ReadM SNP 0008.scaffold00029 325951 1 A T - Both SNP 0008.scaffold00029 325999 1 G A scaffold7552 Both SNP 0008.scaffold00029 326060 1 T C scaffold7552 Both SNP 0008.scaffold00029 326155 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 326208 1 G C scaffold7552 ScafM SNP 0008.scaffold00029 326216 1 T G scaffold7552 ScafM SNP 0008.scaffold00029 326236 2 GA AG scaffold7552 ScafM SNP 0008.scaffold00029 326246 1 T C scaffold7552 ReadM SNP 0008.scaffold00029 326501 1 T C - ReadM SNP 0008.scaffold00029 326504 1 A G - ReadM INDEL 0008.scaffold00029 326531 1 A . - ReadM INDEL 0008.scaffold00029 326563 1 A . - ReadM SNP 0008.scaffold00029 326582 1 C T - ReadM SNP 0008.scaffold00029 326612 1 T C - ReadM SNP 0008.scaffold00029 326721 1 A T - ReadM SNP 0008.scaffold00029 326756 1 T C - ReadM INDEL 0008.scaffold00029 326783 1 . C - ScafM SNP 0008.scaffold00029 327168 1 C G scaffold7552 ScafM INDEL 0008.scaffold00029 327289 2 TT .. scaffold7552 ScafM SNP 0008.scaffold00029 327306 1 A T scaffold7552 ScafM SNP 0008.scaffold00029 327468 1 C G scaffold7552 ScafM SNP 0008.scaffold00029 327554 1 G A scaffold7552 ScafM SNP 0008.scaffold00029 327597 1 C T scaffold7552 ReadM SNP 0008.scaffold00029 328074 1 A G - ReadM SNP 0008.scaffold00029 328086 1 C T - ReadM SNP 0008.scaffold00029 328373 1 G T - ReadM INDEL 0008.scaffold00029 328398 1 G . - ReadM SNP 0008.scaffold00029 328622 1 T A - Both SNP 0008.scaffold00029 328656 1 A G scaffold7552 Both SNP 0008.scaffold00029 328756 1 T G scaffold7552 ScafM SNP 0008.scaffold00029 328796 1 T G scaffold7552 ScafM SNP 0008.scaffold00029 328824 1 A G scaffold7552 Both SNP 0008.scaffold00029 328903 1 A G scaffold7552 Both SNP 0008.scaffold00029 329025 1 T C scaffold7552 Both SNP 0008.scaffold00029 329032 1 G T scaffold7552 ReadM SNP 0008.scaffold00029 329224 1 C T - ReadM SNP 0008.scaffold00029 329230 1 C T - ReadM INDEL 0008.scaffold00029 329350 1 . C - ReadM SNP 0008.scaffold00029 329360 1 A T - ReadM SNP 0008.scaffold00029 329383 1 C T - ReadM SNP 0008.scaffold00029 329426 1 A G - ReadM SNP 0008.scaffold00029 329435 1 G T - ReadM SNP 0008.scaffold00029 329452 1 G T - ReadM SNP 0008.scaffold00029 329523 1 C T - ReadM SNP 0008.scaffold00029 329582 1 G T - ReadM SNP 0008.scaffold00029 329645 1 C T - ReadM INDEL 0008.scaffold00029 329667 1 A . - ReadM SNP 0008.scaffold00029 329684 1 C T - ReadM SNP 0008.scaffold00029 329815 1 A G - ReadM SNP 0008.scaffold00029 329858 1 T A - ReadM SNP 0008.scaffold00029 329922 1 A G - Both SNP 0008.scaffold00029 330004 1 G A scaffold7552 Both INDEL 0008.scaffold00029 330029 1 . A scaffold7552 Both SNP 0008.scaffold00029 330044 1 C T scaffold7552 Both SNP 0008.scaffold00029 330053 1 T C scaffold7552 Both INDEL 0008.scaffold00029 330116 1 . G scaffold7552 Both SNP 0008.scaffold00029 330140 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 330182 1 A C scaffold7552 ScafM SNP 0008.scaffold00029 330185 1 T G scaffold7552 ScafM SNP 0008.scaffold00029 330192 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 330216 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 330218 1 A T scaffold7552 ScafM SNP 0008.scaffold00029 330226 1 C T scaffold7552 Both SNP 0008.scaffold00029 330266 1 C T scaffold7552 Both SNP 0008.scaffold00029 330298 1 A G scaffold7552 Both SNP 0008.scaffold00029 330308 1 T C scaffold7552 Both SNP 0008.scaffold00029 330354 1 A G scaffold7552 Both SNP 0008.scaffold00029 330416 1 A G scaffold7552 ReadM SNP 0008.scaffold00029 330467 1 G A - ReadM SNP 0008.scaffold00029 330547 1 G A - ReadM SNP 0008.scaffold00029 330652 1 A T - ReadM SNP 0008.scaffold00029 330736 1 G A - ReadM SNP 0008.scaffold00029 330765 1 T C - ReadM SNP 0008.scaffold00029 330928 1 G A - ReadM SNP 0008.scaffold00029 331110 1 C T - ReadM SNP 0008.scaffold00029 331114 1 A G - ReadM INDEL 0008.scaffold00029 331162 1 . A - ReadM SNP 0008.scaffold00029 331262 1 G C - ReadM INDEL 0008.scaffold00029 331288 1 . A - Both SNP 0008.scaffold00029 331361 1 A C scaffold7552 Both SNP 0008.scaffold00029 331376 1 C A scaffold7552 Both SNP 0008.scaffold00029 331419 1 A G scaffold7552 Both SNP 0008.scaffold00029 331601 1 G T scaffold7552 Both SNP 0008.scaffold00029 331635 1 G T scaffold7552 Both SNP 0008.scaffold00029 331651 1 T A scaffold7552 Both SNP 0008.scaffold00029 331758 1 T A scaffold7552 Both SNP 0008.scaffold00029 331779 1 C T scaffold7552 Both SNP 0008.scaffold00029 331800 1 A T scaffold7552 Both SNP 0008.scaffold00029 331917 1 A G scaffold7552 Both INDEL 0008.scaffold00029 331950 1 . A scaffold7552 ScafM INDEL 0008.scaffold00029 332080 1 . T scaffold7552 ReadM SNP 0008.scaffold00029 332084 1 T C - ScafM SNP 0008.scaffold00029 332171 1 A G scaffold7552 ScafM SNP 0008.scaffold00029 332187 1 C T scaffold7552 ScafM SNP 0008.scaffold00029 332199 1 A T scaffold7552 Both SNP 0008.scaffold00029 332206 1 C T scaffold7552 Both SNP 0008.scaffold00029 332289 1 A G scaffold7552 Both SNP 0008.scaffold00029 332300 1 C T scaffold7552 ReadM INDEL 0008.scaffold00029 332318 1 . A - ReadM SNP 0008.scaffold00029 332435 1 G C - ReadM SNP 0008.scaffold00029 332440 1 A C - ReadM SNP 0008.scaffold00029 332452 1 C A - ReadM SNP 0008.scaffold00029 332610 1 A G - ReadM SNP 0008.scaffold00029 332710 1 G A - ReadM SNP 0008.scaffold00029 333619 1 C T - ReadM SNP 0008.scaffold00029 333797 1 A G - ReadM SNP 0008.scaffold00029 333812 1 A C - ReadM SNP 0008.scaffold00029 333821 1 A G - ReadM SNP 0008.scaffold00029 333887 1 C T - ReadM SNP 0008.scaffold00029 333899 1 C A - ReadM SNP 0008.scaffold00029 334161 1 A G - ReadM SNP 0008.scaffold00029 334176 1 T G - ReadM SNP 0008.scaffold00029 334256 1 G A - ReadM SNP 0008.scaffold00029 334259 1 C G - ReadM SNP 0008.scaffold00029 334331 1 C G - ReadM SNP 0008.scaffold00029 334353 1 T C - ReadM SNP 0008.scaffold00029 334398 1 G A - ReadM SNP 0008.scaffold00029 334544 1 A G - ReadM SNP 0008.scaffold00029 334570 1 T C - ReadM SNP 0008.scaffold00029 334619 1 A G - ReadM SNP 0008.scaffold00029 334796 1 G C - ReadM SNP 0008.scaffold00029 334819 1 C A - ReadM SNP 0008.scaffold00029 334846 1 C T - ReadM SNP 0008.scaffold00029 334901 1 A G - ReadM SNP 0008.scaffold00029 334906 1 T C - ReadM SNP 0008.scaffold00029 334928 1 A G - ReadM SNP 0008.scaffold00029 335055 1 T A - ReadM SNP 0008.scaffold00029 335066 1 A G - ReadM SNP 0008.scaffold00029 335202 1 A C - ScafM SNP 0008.scaffold00029 338638 2 GC AA scaffold32034 ScafM SNP 0008.scaffold00029 338673 1 C T scaffold32034 ReadM SNP 0008.scaffold00029 361700 1 A C - ReadM SNP 0008.scaffold00029 361727 1 T A - ReadM SNP 0008.scaffold00029 361811 1 C T - ReadM SNP 0008.scaffold00029 361903 1 A C - ReadM SNP 0008.scaffold00029 361998 1 T A - Both SNP 0008.scaffold00029 362036 1 T A scaffold13810 Both SNP 0008.scaffold00029 362119 1 T C scaffold13810 Both SNP 0008.scaffold00029 362126 1 G T scaffold13810 ReadM SNP 0008.scaffold00029 362200 1 A G - ReadM SNP 0008.scaffold00029 362285 1 G T - ReadM SNP 0008.scaffold00029 362314 1 G T - ReadM SNP 0008.scaffold00029 362326 1 T A - ReadM SNP 0008.scaffold00029 362456 1 T A - ReadM SNP 0008.scaffold00029 362492 1 A G - ReadM SNP 0008.scaffold00029 362554 1 T G - ReadM SNP 0008.scaffold00029 362570 1 T G - ReadM SNP 0008.scaffold00029 362585 1 T C - ReadM SNP 0008.scaffold00029 362768 1 G A - ReadM SNP 0008.scaffold00029 362814 1 T G - ReadM SNP 0008.scaffold00029 362828 1 C T - ReadM SNP 0008.scaffold00029 362879 1 T A - ReadM SNP 0008.scaffold00029 363010 1 T A - ReadM SNP 0008.scaffold00029 363048 1 A C - ReadM SNP 0008.scaffold00029 363080 1 T C - ReadM SNP 0008.scaffold00029 363125 1 A T - ReadM SNP 0008.scaffold00029 363180 1 A C - ReadM SNP 0008.scaffold00029 363202 1 T C - ReadM SNP 0008.scaffold00029 363221 1 A G - ReadM SNP 0008.scaffold00029 363356 1 C T - ReadM SNP 0008.scaffold00029 363389 1 C A - ReadM SNP 0008.scaffold00029 363449 1 G C - ReadM SNP 0008.scaffold00029 363476 1 T C - ReadM SNP 0008.scaffold00029 363536 1 C T - ReadM SNP 0008.scaffold00029 363541 1 T C - ReadM SNP 0008.scaffold00029 363587 1 G A - ReadM SNP 0008.scaffold00029 363634 1 T G - ReadM SNP 0008.scaffold00029 363644 1 G T - ReadM SNP 0008.scaffold00029 363703 1 C T - ReadM SNP 0008.scaffold00029 363919 1 A C - ReadM SNP 0008.scaffold00029 363990 1 T C - Both SNP 0008.scaffold00029 364035 1 A G scaffold13810 ScafM SNP 0008.scaffold00029 364045 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 364061 1 A G scaffold13810 ScafM SNP 0008.scaffold00029 364070 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 364079 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 364082 1 T A scaffold13810 ScafM SNP 0008.scaffold00029 364114 1 T C scaffold13810 ReadM SNP 0008.scaffold00029 364178 1 A G - ReadM SNP 0008.scaffold00029 364205 1 A C - Both SNP 0008.scaffold00029 364239 1 C T scaffold13810 Both SNP 0008.scaffold00029 364272 1 A G scaffold13810 Both SNP 0008.scaffold00029 364277 1 A G scaffold13810 Both SNP 0008.scaffold00029 364310 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 364355 1 A T scaffold13810 ScafM SNP 0008.scaffold00029 364371 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 364382 2 TA CC scaffold13810 Both SNP 0008.scaffold00029 364445 1 C T scaffold13810 Both SNP 0008.scaffold00029 364463 1 G A scaffold13810 Both SNP 0008.scaffold00029 364468 1 T G scaffold13810 ScafM SNP 0008.scaffold00029 364544 1 A C scaffold13810 ScafM INDEL 0008.scaffold00029 364560 11 ........... CTTCTAATTTA scaffold13810 Both SNP 0008.scaffold00029 364602 1 A C scaffold13810 ReadM SNP 0008.scaffold00029 364662 1 A G - ReadM SNP 0008.scaffold00029 364732 1 C A - ReadM SNP 0008.scaffold00029 364854 1 A G - ReadM SNP 0008.scaffold00029 364889 1 C A - ReadM SNP 0008.scaffold00029 364941 1 T C - ReadM SNP 0008.scaffold00029 364950 1 T A - ReadM SNP 0008.scaffold00029 365073 1 A C - ReadM SNP 0008.scaffold00029 365112 1 G T - ReadM SNP 0008.scaffold00029 365180 1 A G - ReadM SNP 0008.scaffold00029 365435 1 T C - ReadM SNP 0008.scaffold00029 365447 1 T A - ReadM SNP 0008.scaffold00029 365462 1 T G - Both SNP 0008.scaffold00029 365493 1 G A scaffold13810 Both SNP 0008.scaffold00029 365617 1 T A scaffold13810 Both SNP 0008.scaffold00029 365638 1 A C scaffold13810 Both SNP 0008.scaffold00029 365660 1 G A scaffold13810 ScafM SNP 0008.scaffold00029 365683 1 T G scaffold13810 Both SNP 0008.scaffold00029 365720 1 C A scaffold13810 Both SNP 0008.scaffold00029 365723 1 T G scaffold13810 ScafM SNP 0008.scaffold00029 365766 1 A G scaffold13810 ScafM SNP 0008.scaffold00029 365799 1 C A scaffold13810 Both SNP 0008.scaffold00029 365803 1 G T scaffold13810 Both SNP 0008.scaffold00029 365810 1 C T scaffold13810 Both SNP 0008.scaffold00029 365886 1 C T scaffold13810 Both INDEL 0008.scaffold00029 365961 1 C . scaffold13810 Both SNP 0008.scaffold00029 365989 1 C G scaffold13810 ScafM SNP 0008.scaffold00029 366035 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 366053 1 G T scaffold13810 ScafM SNP 0008.scaffold00029 366063 1 C A scaffold13810 ScafM SNP 0008.scaffold00029 366081 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 366088 1 G T scaffold13810 ScafM SNP 0008.scaffold00029 366091 1 A T scaffold13810 Both SNP 0008.scaffold00029 366164 1 A G scaffold13810 Both SNP 0008.scaffold00029 366243 1 G A scaffold13810 Both SNP 0008.scaffold00029 366262 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 366286 1 T A scaffold13810 ScafM SNP 0008.scaffold00029 366295 1 T G scaffold13810 ScafM SNP 0008.scaffold00029 366299 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 366306 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 366332 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 366352 1 T A scaffold13810 Both SNP 0008.scaffold00029 366398 1 C T scaffold13810 Both SNP 0008.scaffold00029 366416 1 T G scaffold13810 Both SNP 0008.scaffold00029 366424 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 366473 1 A G scaffold13810 ScafM SNP 0008.scaffold00029 366481 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 366483 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 366485 1 A G scaffold13810 Both SNP 0008.scaffold00029 366578 1 G A scaffold13810 Both SNP 0008.scaffold00029 366589 1 G T scaffold13810 Both SNP 0008.scaffold00029 366601 1 A G scaffold13810 Both SNP 0008.scaffold00029 366760 1 C T scaffold13810 Both SNP 0008.scaffold00029 366799 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 366835 1 A T scaffold13810 Both SNP 0008.scaffold00029 366868 1 A G scaffold13810 Both SNP 0008.scaffold00029 366910 1 T G scaffold13810 Both SNP 0008.scaffold00029 366946 1 A G scaffold13810 Both SNP 0008.scaffold00029 366978 1 T A scaffold13810 Both SNP 0008.scaffold00029 367039 1 T C scaffold13810 Both SNP 0008.scaffold00029 367094 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 367099 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 367195 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 367202 1 G T scaffold13810 ScafM SNP 0008.scaffold00029 367231 1 A C scaffold13810 ScafM SNP 0008.scaffold00029 367283 1 G A scaffold13810 ScafM SNP 0008.scaffold00029 367291 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 367319 1 C T scaffold13810 ScafM SNP 0008.scaffold00029 367327 1 T C scaffold13810 ScafM SNP 0008.scaffold00029 367353 1 G A scaffold13810 ScafM SNP 0008.scaffold00029 367356 1 G T scaffold13810 ScafM SNP 0008.scaffold00029 367363 2 AT GG scaffold13810 ScafM SNP 0008.scaffold00029 367370 1 A G scaffold13810 ScafM SNP 0008.scaffold00029 367390 1 G A scaffold13810 ScafM SNP 0008.scaffold00029 367399 1 A C scaffold13810 ScafM SNP 0008.scaffold00029 368238 1 C A scaffold4961 ScafM SNP 0008.scaffold00029 368240 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368256 2 TT AC scaffold4961 ScafM INDEL 0008.scaffold00029 368266 2 .. GG scaffold4961 ScafM SNP 0008.scaffold00029 368488 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 368510 1 G C scaffold4961 ScafM INDEL 0008.scaffold00029 368512 3 TTC ... scaffold4961 ScafM INDEL 0008.scaffold00029 368516 2 CG .. scaffold4961 ScafM SNP 0008.scaffold00029 368526 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 368539 5 TTGAA ..... scaffold4961 ScafM SNP 0008.scaffold00029 368550 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368555 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 368565 1 A G scaffold4961 ScafM INDEL 0008.scaffold00029 368590 1 . A scaffold4961 ScafM SNP 0008.scaffold00029 368592 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368622 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368633 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368640 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 368649 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 368656 2 GT AA scaffold4961 ScafM SNP 0008.scaffold00029 368668 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368684 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 368711 2 CC TA scaffold4961 ScafM SNP 0008.scaffold00029 368715 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368722 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368729 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368749 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368753 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 368771 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 368778 2 TC AA scaffold4961 ScafM SNP 0008.scaffold00029 368784 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 368787 1 C A scaffold4961 ScafM SNP 0008.scaffold00029 368803 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368824 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 368830 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 368852 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 368854 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 368899 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 368916 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 368918 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 368928 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 368939 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 368951 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 368957 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 369601 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 369607 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 369619 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 369629 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 369631 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 369638 1 T G scaffold4961 ScafM SNP 0008.scaffold00029 369724 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 369730 1 T G scaffold4961 ScafM INDEL 0008.scaffold00029 369756 1 . C scaffold4961 ScafM SNP 0008.scaffold00029 369761 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 369779 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 369790 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 369792 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 369807 1 T G scaffold4961 ScafM SNP 0008.scaffold00029 369812 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 369816 1 A T scaffold4961 ScafM INDEL 0008.scaffold00029 369859 4 .... CTTT scaffold4961 ScafM SNP 0008.scaffold00029 369863 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 369868 1 T G scaffold4961 ScafM INDEL 0008.scaffold00029 369871 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 369886 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 369889 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 369891 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 369899 2 TG CT scaffold4961 ScafM SNP 0008.scaffold00029 369913 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 369936 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 369945 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 369952 1 T G scaffold4961 ScafM SNP 0008.scaffold00029 369955 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 369975 2 TC CT scaffold4961 ScafM INDEL 0008.scaffold00029 369995 1 . T scaffold4961 ScafM SNP 0008.scaffold00029 370013 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 370016 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 370019 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370025 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 370032 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370036 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 370049 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 370074 1 C A scaffold4961 ScafM SNP 0008.scaffold00029 370082 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 370088 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 370095 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370104 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370118 1 C T scaffold4961 ScafM INDEL 0008.scaffold00029 370348 1 . A scaffold4961 ScafM SNP 0008.scaffold00029 370368 2 AT GC scaffold4961 ScafM SNP 0008.scaffold00029 370371 2 TA CT scaffold4961 ScafM SNP 0008.scaffold00029 370385 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 370388 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370406 1 T A scaffold4961 ScafM INDEL 0008.scaffold00029 370420 2 .. CT scaffold4961 ScafM SNP 0008.scaffold00029 370425 2 GG TA scaffold4961 ScafM SNP 0008.scaffold00029 370454 1 C A scaffold4961 ScafM SNP 0008.scaffold00029 370458 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370466 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370494 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370498 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 370521 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 370529 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370536 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 370542 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370578 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370645 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370726 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370748 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 370776 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370780 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 370783 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370789 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 370807 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 370809 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 370859 1 C A scaffold4961 ScafM SNP 0008.scaffold00029 370885 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 370888 2 AA TG scaffold4961 ScafM SNP 0008.scaffold00029 370907 2 AA GT scaffold4961 ScafM INDEL 0008.scaffold00029 370964 7 AATTTCA ....... scaffold4961 ScafM SNP 0008.scaffold00029 370976 1 C G scaffold4961 ScafM INDEL 0008.scaffold00029 371100 2 AT .G scaffold4961 ScafM SNP 0008.scaffold00029 371106 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 371112 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 371155 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 371167 1 G C scaffold4961 ScafM INDEL 0008.scaffold00029 371241 24 AAAAGAAGAGAGGTTTTAAGGTAA ........................ scaffold4961 ScafM INDEL 0008.scaffold00029 371267 2 AA .. scaffold4961 ScafM SNP 0008.scaffold00029 371321 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 371328 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 371354 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 371356 1 T G scaffold4961 ScafM SNP 0008.scaffold00029 371391 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 371404 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 371420 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 371432 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 371615 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 371708 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 371802 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 371807 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 371918 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 371995 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 372004 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 372059 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 372125 1 C G scaffold4961 Both SNP 0008.scaffold00029 372188 1 G A scaffold4961 Both INDEL 0008.scaffold00029 372269 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 372318 1 C G scaffold4961 ScafM INDEL 0008.scaffold00029 372342 4 .... AAAA scaffold4961 ScafM SNP 0008.scaffold00029 372392 2 TT AG scaffold4961 ScafM SNP 0008.scaffold00029 372400 1 A C scaffold4961 ScafM INDEL 0008.scaffold00029 372404 1 G . scaffold4961 ScafM INDEL 0008.scaffold00029 372477 3 TAA ... scaffold4961 ScafM SNP 0008.scaffold00029 372488 1 T G scaffold4961 ScafM SNP 0008.scaffold00029 372550 2 AC CA scaffold4961 ScafM INDEL 0008.scaffold00029 372583 1 T . scaffold4961 ScafM INDEL 0008.scaffold00029 372591 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 372602 1 T C scaffold4961 ScafM INDEL 0008.scaffold00029 372672 1 . A scaffold4961 ScafM INDEL 0008.scaffold00029 372762 3 ... TTT scaffold4961 ScafM SNP 0008.scaffold00029 372839 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 372855 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 373797 2 .. TT scaffold4961 ScafM SNP 0008.scaffold00029 373799 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 373801 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 373816 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 373821 1 T C scaffold4961 ScafM INDEL 0008.scaffold00029 373826 1 . T scaffold4961 ScafM SNP 0008.scaffold00029 373837 2 TT AA scaffold4961 ScafM SNP 0008.scaffold00029 373879 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 373951 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 374023 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 374046 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 374263 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 374277 1 T A scaffold4961 ScafM INDEL 0008.scaffold00029 374292 5 AACTG ..... scaffold4961 ScafM INDEL 0008.scaffold00029 374299 3 TGT ..A scaffold4961 ScafM SNP 0008.scaffold00029 374321 1 A G scaffold4961 Both SNP 0008.scaffold00029 374359 1 C A scaffold4961 Both SNP 0008.scaffold00029 374369 1 G C scaffold4961 Both INDEL 0008.scaffold00029 374496 1 . T scaffold4961 ScafM SNP 0008.scaffold00029 374499 1 A G scaffold4961 Both INDEL 0008.scaffold00029 374562 1 T . scaffold4961 Both SNP 0008.scaffold00029 374666 1 G C scaffold4961 Both SNP 0008.scaffold00029 374693 1 T A scaffold4961 Both SNP 0008.scaffold00029 374740 1 A G scaffold4961 Both SNP 0008.scaffold00029 374768 1 A C scaffold4961 ReadM SNP 0008.scaffold00029 374931 1 A G - ReadM SNP 0008.scaffold00029 374957 1 T C - ScafM SNP 0008.scaffold00029 375001 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 375013 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 375018 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 375021 2 .. TT scaffold4961 ScafM SNP 0008.scaffold00029 375041 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 375073 1 A T scaffold4961 Both SNP 0008.scaffold00029 375109 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 375165 1 C T scaffold4961 Both SNP 0008.scaffold00029 375204 1 G A scaffold4961 Both SNP 0008.scaffold00029 375226 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 375285 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 375298 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 375300 1 C A scaffold4961 Both SNP 0008.scaffold00029 375319 1 A G scaffold4961 Both SNP 0008.scaffold00029 375361 1 T C scaffold4961 Both SNP 0008.scaffold00029 375402 1 A G scaffold4961 Both SNP 0008.scaffold00029 375433 1 A C scaffold4961 Both INDEL 0008.scaffold00029 375462 1 . A scaffold4961 Both INDEL 0008.scaffold00029 375561 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 375563 1 G C scaffold4961 Both SNP 0008.scaffold00029 375582 1 T C scaffold4961 Both SNP 0008.scaffold00029 375629 1 A G scaffold4961 Both INDEL 0008.scaffold00029 375796 3 TAA ... scaffold4961 ReadM SNP 0008.scaffold00029 376055 1 C G - ReadM SNP 0008.scaffold00029 376237 1 C T - ReadM SNP 0008.scaffold00029 376401 1 G A - ReadM SNP 0008.scaffold00029 376516 1 C T - ReadM SNP 0008.scaffold00029 377086 1 T C - ReadM SNP 0008.scaffold00029 377150 1 T C - ReadM SNP 0008.scaffold00029 377233 1 T C - ReadM SNP 0008.scaffold00029 377275 1 C T - ReadM SNP 0008.scaffold00029 377557 1 A G - ReadM SNP 0008.scaffold00029 377599 1 G A - ReadM SNP 0008.scaffold00029 377956 1 A G - ReadM SNP 0008.scaffold00029 377970 1 T C - ScafM INDEL 0008.scaffold00029 378391 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 378393 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 378402 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 378417 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 378421 1 A G scaffold4961 ScafM INDEL 0008.scaffold00029 378423 6 TCTTAG ...... scaffold4961 ScafM SNP 0008.scaffold00029 378436 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 378440 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 378442 1 G C scaffold4961 ScafM INDEL 0008.scaffold00029 378496 1 A . scaffold4961 ScafM SNP 0008.scaffold00029 378503 1 A C scaffold4961 ScafM INDEL 0008.scaffold00029 378507 3 ACA ... scaffold4961 ScafM SNP 0008.scaffold00029 378533 1 G C scaffold4961 ScafM INDEL 0008.scaffold00029 378542 2 GG .. scaffold4961 ScafM INDEL 0008.scaffold00029 378546 1 T . scaffold4961 ScafM INDEL 0008.scaffold00029 378548 1 T . scaffold4961 ScafM SNP 0008.scaffold00029 378555 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 378564 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 378957 3 GGC TAT scaffold4961 ScafM INDEL 0008.scaffold00029 378963 3 GTT .AG scaffold4961 ScafM SNP 0008.scaffold00029 379001 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 379014 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 379020 1 G A scaffold4961 Both SNP 0008.scaffold00029 379078 1 C A scaffold4961 Both SNP 0008.scaffold00029 379110 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 379150 1 G A scaffold4961 Both SNP 0008.scaffold00029 379190 1 T G scaffold4961 Both SNP 0008.scaffold00029 379247 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 379283 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 379336 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 379389 1 A G scaffold4961 Both SNP 0008.scaffold00029 379425 1 G A scaffold4961 Both SNP 0008.scaffold00029 379444 1 T A scaffold4961 Both SNP 0008.scaffold00029 379457 1 T G scaffold4961 Both SNP 0008.scaffold00029 379657 1 A T scaffold4961 Both SNP 0008.scaffold00029 379958 1 A T scaffold4961 ReadM SNP 0008.scaffold00029 380657 1 G A - ScafM SNP 0008.scaffold00029 380838 1 T C scaffold4961 ReadM SNP 0008.scaffold00029 381116 1 A G - ScafM SNP 0008.scaffold00029 381528 1 G C scaffold4961 Both SNP 0008.scaffold00029 381583 1 C G scaffold4961 Both SNP 0008.scaffold00029 381599 1 A G scaffold4961 Both SNP 0008.scaffold00029 381670 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 381822 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 381827 2 GC AG scaffold4961 ScafM SNP 0008.scaffold00029 381833 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 381838 1 C T scaffold4961 Both SNP 0008.scaffold00029 381863 1 T C scaffold4961 Both SNP 0008.scaffold00029 382051 1 C G scaffold4961 Both SNP 0008.scaffold00029 382137 1 T A scaffold4961 ScafM INDEL 0008.scaffold00029 382569 3 ... TTT scaffold4961 Both SNP 0008.scaffold00029 382832 1 G A scaffold4961 Both SNP 0008.scaffold00029 382997 1 A T scaffold4961 Both SNP 0008.scaffold00029 383015 1 T C scaffold4961 Both SNP 0008.scaffold00029 383017 1 G A scaffold4961 Both INDEL 0008.scaffold00029 383038 1 . A scaffold4961 Both SNP 0008.scaffold00029 383465 1 T G scaffold4961 Both SNP 0008.scaffold00029 383599 1 T C scaffold4961 Both SNP 0008.scaffold00029 383678 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 401877 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 401999 1 G T scaffold4961 ScafM INDEL 0008.scaffold00029 402328 15 GAATTAAGATTTTTA ............... scaffold4961 ReadM SNP 0008.scaffold00029 402717 1 A C - Both SNP 0008.scaffold00029 402924 1 T C scaffold4961 ReadM INDEL 0008.scaffold00029 403217 1 T . - ScafM INDEL 0008.scaffold00029 403449 5 ..... AATTT scaffold4961 ScafM SNP 0008.scaffold00029 403451 1 G C scaffold4961 ReadM SNP 0008.scaffold00029 404315 1 T C - ReadM INDEL 0008.scaffold00029 404502 1 . T - ReadM SNP 0008.scaffold00029 404569 1 G A - ReadM SNP 0008.scaffold00029 404650 1 G A - ReadM SNP 0008.scaffold00029 404683 1 A T - ReadM SNP 0008.scaffold00029 404966 1 A G - Both INDEL 0008.scaffold00029 405289 1 . T scaffold4961 ReadM SNP 0008.scaffold00029 405720 1 G A - ReadM SNP 0008.scaffold00029 405833 1 A G - Both SNP 0008.scaffold00029 406348 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 406368 1 A T scaffold4961 Both SNP 0008.scaffold00029 406451 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 406508 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 406571 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 406628 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 407924 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 408887 1 T G scaffold33598 ScafM SNP 0008.scaffold00029 409343 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 409396 1 A G scaffold4961 ScafM SNP 0008.scaffold00029 409619 1 C G scaffold4961 ScafM INDEL 0008.scaffold00029 409696 3 TTA ... scaffold4961 ScafM SNP 0008.scaffold00029 409876 1 C G scaffold4961 ReadM SNP 0008.scaffold00029 410074 1 A C - Both SNP 0008.scaffold00029 410430 1 A G scaffold4961 Both SNP 0008.scaffold00029 410486 1 C T scaffold4961 ReadM SNP 0008.scaffold00029 410643 1 G A - ReadM SNP 0008.scaffold00029 410699 1 T G - ReadM SNP 0008.scaffold00029 410811 1 T C - ReadM SNP 0008.scaffold00029 410840 1 T C - ReadM SNP 0008.scaffold00029 410950 1 T C - ReadM SNP 0008.scaffold00029 411059 1 G A - ReadM SNP 0008.scaffold00029 411077 1 A G - ReadM SNP 0008.scaffold00029 411286 1 C T - ReadM INDEL 0008.scaffold00029 411455 1 T . - ReadM SNP 0008.scaffold00029 411627 1 T C - ReadM SNP 0008.scaffold00029 411732 1 C T - ReadM SNP 0008.scaffold00029 411818 1 G A - Both SNP 0008.scaffold00029 412002 1 C T scaffold4961 ScafM INDEL 0008.scaffold00029 412104 78 .............................................................................. GGAATCGACACACTTTTTAAAAAAGTCATGTATGTGGAGATAGAAACATATTTCATATCCTTCACTCGTTTACCTTAA scaffold4961 ReadM SNP 0008.scaffold00029 412106 1 T G - ScafM INDEL 0008.scaffold00029 412106 3 ... AGG scaffold4961 Both SNP 0008.scaffold00029 412274 1 G A scaffold4961 ReadM SNP 0008.scaffold00029 412374 1 C G - ReadM SNP 0008.scaffold00029 412408 1 G T - ReadM SNP 0008.scaffold00029 412479 1 G A - ReadM SNP 0008.scaffold00029 412889 1 G C - ReadM SNP 0008.scaffold00029 413129 1 A G - ReadM SNP 0008.scaffold00029 413163 1 C G - Both SNP 0008.scaffold00029 413534 1 C T scaffold4961 Both SNP 0008.scaffold00029 413550 1 T A scaffold4961 ReadM SNP 0008.scaffold00029 413573 1 G C - ReadM SNP 0008.scaffold00029 413859 1 A C - Both SNP 0008.scaffold00029 413907 1 G T scaffold4961 ReadM SNP 0008.scaffold00029 413953 1 C T - ScafM SNP 0008.scaffold00029 414194 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 414226 1 C T scaffold4961 ReadM SNP 0008.scaffold00029 414317 1 A C - ReadM SNP 0008.scaffold00029 414353 1 T C - ReadM SNP 0008.scaffold00029 415065 1 A T - ReadM SNP 0008.scaffold00029 415096 1 T C - ReadM SNP 0008.scaffold00029 415168 1 A G - ReadM SNP 0008.scaffold00029 415494 1 A G - ReadM SNP 0008.scaffold00029 415585 1 G C - ReadM SNP 0008.scaffold00029 415793 1 T A - ReadM SNP 0008.scaffold00029 415941 1 G A - ReadM SNP 0008.scaffold00029 416469 1 T C - Both SNP 0008.scaffold00029 416766 1 T C scaffold4961 Both SNP 0008.scaffold00029 416908 1 G A scaffold4961 ScafM SNP 0008.scaffold00029 417262 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 417344 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 418024 1 T G scaffold4961 ScafM INDEL 0008.scaffold00029 418153 3 ... AAA scaffold4961 ScafM SNP 0008.scaffold00029 418281 1 T A scaffold4961 ScafM INDEL 0008.scaffold00029 418283 1 . T scaffold4961 ScafM SNP 0008.scaffold00029 418285 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 418287 1 T G scaffold4961 ScafM INDEL 0008.scaffold00029 418289 1 A . scaffold4961 ScafM INDEL 0008.scaffold00029 418316 1 . A scaffold4961 ScafM SNP 0008.scaffold00029 418446 1 G C scaffold4961 ScafM INDEL 0008.scaffold00029 418522 1 . A scaffold4961 ScafM SNP 0008.scaffold00029 418753 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 418872 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 418880 1 T A scaffold4961 ReadM SNP 0008.scaffold00029 419162 1 T C - Both SNP 0008.scaffold00029 419200 1 G A scaffold4961 Both SNP 0008.scaffold00029 419263 1 A G scaffold4961 ReadM SNP 0008.scaffold00029 421600 1 G A - ReadM SNP 0008.scaffold00029 421644 1 G A - ReadM SNP 0008.scaffold00029 421818 1 C A - ReadM SNP 0008.scaffold00029 422004 1 C A - ReadM SNP 0008.scaffold00029 422012 1 C T - Both SNP 0008.scaffold00029 422295 1 A C scaffold4961 Both SNP 0008.scaffold00029 422554 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 423180 1 T G scaffold4961 ReadM SNP 0008.scaffold00029 423305 1 T G - ReadM SNP 0008.scaffold00029 423432 1 T A - ReadM SNP 0008.scaffold00029 423691 1 T C - ReadM SNP 0008.scaffold00029 424174 1 T C - ReadM SNP 0008.scaffold00029 424457 1 A G - ScafM INDEL 0008.scaffold00029 424592 2 .. TT scaffold4961 ScafM SNP 0008.scaffold00029 424594 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 424599 1 G A scaffold4961 ReadM SNP 0008.scaffold00029 424669 1 C A - ReadM SNP 0008.scaffold00029 424761 1 G A - ReadM SNP 0008.scaffold00029 424840 1 T A - ReadM SNP 0008.scaffold00029 424854 1 G A - ReadM SNP 0008.scaffold00029 424856 1 A C - ReadM SNP 0008.scaffold00029 426877 1 A G - ReadM SNP 0008.scaffold00029 426952 1 T A - ReadM SNP 0008.scaffold00029 427236 1 C T - ReadM SNP 0008.scaffold00029 427315 1 A G - ReadM SNP 0008.scaffold00029 427350 1 A G - ReadM SNP 0008.scaffold00029 427507 1 G T - ReadM SNP 0008.scaffold00029 427570 1 A G - ReadM SNP 0008.scaffold00029 427575 1 T C - ReadM SNP 0008.scaffold00029 427670 1 A G - ReadM SNP 0008.scaffold00029 427758 1 A G - ReadM SNP 0008.scaffold00029 427832 1 C G - ReadM SNP 0008.scaffold00029 427929 1 G C - ReadM SNP 0008.scaffold00029 428158 1 G A - ReadM SNP 0008.scaffold00029 428200 1 C T - ReadM SNP 0008.scaffold00029 428308 1 T G - ReadM SNP 0008.scaffold00029 428411 1 A G - ReadM SNP 0008.scaffold00029 428419 1 A G - ReadM SNP 0008.scaffold00029 428538 1 G A - ReadM SNP 0008.scaffold00029 428549 1 T G - ReadM SNP 0008.scaffold00029 428595 1 C G - ReadM SNP 0008.scaffold00029 428718 1 G A - ReadM SNP 0008.scaffold00029 428848 1 A C - ReadM INDEL 0008.scaffold00029 428974 2 CG .. - ReadM SNP 0008.scaffold00029 429217 1 A G - ReadM SNP 0008.scaffold00029 429486 1 A G - ReadM SNP 0008.scaffold00029 429599 1 A C - ScafM SNP 0008.scaffold00029 433595 1 T G scaffold361 ScafM SNP 0008.scaffold00029 433606 1 G A scaffold361 ScafM SNP 0008.scaffold00029 433612 1 T C scaffold361 ScafM SNP 0008.scaffold00029 433630 1 C T scaffold361 ScafM SNP 0008.scaffold00029 433654 1 G T scaffold361 ScafM SNP 0008.scaffold00029 433741 1 C A scaffold361 ScafM SNP 0008.scaffold00029 433747 4 GACA AGTG scaffold361 ScafM SNP 0008.scaffold00029 433780 1 A T scaffold361 ReadM SNP 0008.scaffold00029 438128 1 A C - ReadM SNP 0008.scaffold00029 438165 1 T C - ReadM SNP 0008.scaffold00029 438213 1 A G - ReadM SNP 0008.scaffold00029 438217 1 A T - ReadM SNP 0008.scaffold00029 438341 1 A G - ReadM SNP 0008.scaffold00029 438363 1 C T - Both SNP 0008.scaffold00029 438704 1 T C scaffold4961 ReadM SNP 0008.scaffold00029 438764 1 C T - ReadM SNP 0008.scaffold00029 438791 1 G T - ScafM INDEL 0008.scaffold00029 439180 1 T . scaffold4961 Both INDEL 0008.scaffold00029 439191 1 A . scaffold4961 Both SNP 0008.scaffold00029 439241 1 A T scaffold4961 Both SNP 0008.scaffold00029 439432 1 T A scaffold4961 Both INDEL 0008.scaffold00029 439998 1 T . scaffold4961 Both SNP 0008.scaffold00029 440013 1 T C scaffold4961 Both INDEL 0008.scaffold00029 440161 1 . A scaffold4961 ReadM SNP 0008.scaffold00029 440295 1 G A - ReadM SNP 0008.scaffold00029 440316 1 T G - ReadM SNP 0008.scaffold00029 440429 1 T A - ReadM SNP 0008.scaffold00029 441234 1 G T - ReadM SNP 0008.scaffold00029 441306 1 G T - ReadM SNP 0008.scaffold00029 441319 1 A C - ReadM INDEL 0008.scaffold00029 441351 1 T . - ReadM SNP 0008.scaffold00029 441403 1 T C - ReadM SNP 0008.scaffold00029 441524 1 C T - ReadM SNP 0008.scaffold00029 441668 1 A T - ReadM SNP 0008.scaffold00029 442204 1 A G - ScafM SNP 0008.scaffold00029 442277 1 C T scaffold4961 Both SNP 0008.scaffold00029 442502 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 442628 1 . C scaffold4961 Both SNP 0008.scaffold00029 442699 1 A T scaffold4961 Both SNP 0008.scaffold00029 442711 1 C T scaffold4961 Both SNP 0008.scaffold00029 442824 1 C T scaffold4961 Both SNP 0008.scaffold00029 442851 1 G C scaffold4961 ScafM SNP 0008.scaffold00029 444563 1 A G scaffold4961 ReadM SNP 0008.scaffold00029 444774 1 G A - ReadM SNP 0008.scaffold00029 445017 1 C T - ReadM SNP 0008.scaffold00029 445036 1 C T - ReadM SNP 0008.scaffold00029 445392 1 C A - ReadM SNP 0008.scaffold00029 445480 1 A G - ReadM SNP 0008.scaffold00029 445626 2 AT GC - ReadM SNP 0008.scaffold00029 445689 1 A T - ReadM SNP 0008.scaffold00029 445717 1 T A - ReadM SNP 0008.scaffold00029 446327 1 A G - Both SNP 0008.scaffold00029 446554 1 T A scaffold4961 Both INDEL 0008.scaffold00029 446562 1 . T scaffold4961 Both SNP 0008.scaffold00029 446613 1 A G scaffold4961 Both SNP 0008.scaffold00029 446728 1 T C scaffold4961 Both SNP 0008.scaffold00029 446908 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 447088 1 T C scaffold4961 ScafM SNP 0008.scaffold00029 448900 1 C T scaffold4961 ScafM SNP 0008.scaffold00029 448903 1 C A scaffold4961 Both SNP 0008.scaffold00029 448963 1 A G scaffold4961 Both SNP 0008.scaffold00029 449124 1 C T scaffold4961 Both SNP 0008.scaffold00029 449213 1 A T scaffold4961 Both INDEL 0008.scaffold00029 449255 2 AA .. scaffold4961 ReadM SNP 0008.scaffold00029 449360 1 T A - ReadM SNP 0008.scaffold00029 449512 1 T A - ReadM SNP 0008.scaffold00029 449550 1 T G - ReadM SNP 0008.scaffold00029 449586 1 T G - ReadM SNP 0008.scaffold00029 449626 1 T C - ReadM SNP 0008.scaffold00029 449830 1 G T - ReadM SNP 0008.scaffold00029 449914 1 G A - ReadM SNP 0008.scaffold00029 450085 1 C T - ReadM SNP 0008.scaffold00029 450244 1 T C - Both SNP 0008.scaffold00029 450293 1 C A scaffold4961 Both SNP 0008.scaffold00029 450310 1 G A scaffold4961 Both SNP 0008.scaffold00029 450396 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 450510 1 A . scaffold4961 ScafM INDEL 0008.scaffold00029 450513 2 .A CT scaffold4961 ScafM SNP 0008.scaffold00029 450516 2 CA GC scaffold4961 ScafM INDEL 0008.scaffold00029 450519 1 A . scaffold4961 ScafM INDEL 0008.scaffold00029 450522 2 TT .. scaffold4961 ScafM SNP 0008.scaffold00029 450526 1 A T scaffold4961 ScafM SNP 0008.scaffold00029 450529 2 GT CC scaffold4961 ScafM SNP 0008.scaffold00029 450535 2 TC AA scaffold4961 ReadM INDEL 0008.scaffold00029 450536 1 . A - ScafM SNP 0008.scaffold00029 450553 1 G A scaffold4961 Both SNP 0008.scaffold00029 450605 1 T A scaffold4961 ReadM SNP 0008.scaffold00029 450688 2 CT AG - ReadM SNP 0008.scaffold00029 450723 1 A G - Both SNP 0008.scaffold00029 450814 1 T C scaffold4961 Both SNP 0008.scaffold00029 450820 1 A G scaffold4961 ReadM SNP 0008.scaffold00029 450863 1 G A - ReadM INDEL 0008.scaffold00029 450894 1 T . - Both SNP 0008.scaffold00029 451192 1 T C scaffold4961 Both SNP 0008.scaffold00029 451194 1 G A scaffold4961 ReadM SNP 0008.scaffold00029 451433 1 A G - ReadM SNP 0008.scaffold00029 451756 1 A G - ReadM SNP 0008.scaffold00029 451814 1 C T - ReadM SNP 0008.scaffold00029 451842 1 G A - ReadM SNP 0008.scaffold00029 451854 1 G A - ReadM SNP 0008.scaffold00029 451999 1 T C - Both SNP 0008.scaffold00029 452027 1 A G scaffold4961 Both SNP 0008.scaffold00029 452146 1 T C scaffold4961 ReadM SNP 0008.scaffold00029 452287 1 A G - ReadM SNP 0008.scaffold00029 452463 1 C T - ReadM SNP 0008.scaffold00029 452476 1 G A - Both SNP 0008.scaffold00029 452612 1 T C scaffold4961 ReadM SNP 0008.scaffold00029 452870 1 A G - ReadM SNP 0008.scaffold00029 453116 1 C G - ReadM SNP 0008.scaffold00029 453182 1 G A - ReadM SNP 0008.scaffold00029 453312 1 C T - ReadM SNP 0008.scaffold00029 453573 1 A T - ReadM SNP 0008.scaffold00029 453617 1 A C - ReadM SNP 0008.scaffold00029 453809 1 T C - ReadM SNP 0008.scaffold00029 454230 1 A G - ReadM SNP 0008.scaffold00029 454329 1 A T - ReadM SNP 0008.scaffold00029 454420 1 C T - ReadM SNP 0008.scaffold00029 454467 1 A G - ReadM SNP 0008.scaffold00029 454491 1 C A - ReadM SNP 0008.scaffold00029 454532 1 A T - ReadM SNP 0008.scaffold00029 454562 1 A T - Both SNP 0008.scaffold00029 455208 1 C A scaffold4961 Both SNP 0008.scaffold00029 455359 1 T G scaffold4961 ReadM SNP 0008.scaffold00029 456568 1 C T - ReadM SNP 0008.scaffold00029 456713 1 G A - ReadM SNP 0008.scaffold00029 456854 1 G A - ReadM SNP 0008.scaffold00029 457169 1 T G - ReadM SNP 0008.scaffold00029 457225 1 T C - ReadM SNP 0008.scaffold00029 457398 1 C T - ReadM SNP 0008.scaffold00029 457778 1 A G - ReadM SNP 0008.scaffold00029 457796 1 A G - ReadM SNP 0008.scaffold00029 458087 1 A G - ScafM SNP 0008.scaffold00029 458907 1 G T scaffold4961 ScafM INDEL 0008.scaffold00029 458946 1 C . scaffold4961 Both SNP 0008.scaffold00029 459400 1 A G scaffold4961 ReadM SNP 0008.scaffold00029 459441 1 G T - Both SNP 0008.scaffold00029 459579 1 A T scaffold4961 Both SNP 0008.scaffold00029 459740 1 G A scaffold4961 Both SNP 0008.scaffold00029 459797 1 A G scaffold4961 Both SNP 0008.scaffold00029 460329 1 C T scaffold4961 ScafM INDEL 0008.scaffold00029 462474 4 .... AGTT scaffold4961 ScafM SNP 0008.scaffold00029 462503 1 G T scaffold4961 ScafM SNP 0008.scaffold00029 462541 1 A C scaffold4961 ScafM SNP 0008.scaffold00029 462562 1 G A scaffold4961 ScafM INDEL 0008.scaffold00029 462700 9 ......... AAGGTTGTT scaffold4961 ScafM SNP 0008.scaffold00029 462747 1 T G scaffold4961 Both SNP 0008.scaffold00029 462936 1 G T scaffold4961 Both SNP 0008.scaffold00029 463438 1 G A scaffold4961 Both SNP 0008.scaffold00029 463444 1 T C scaffold4961 Both SNP 0008.scaffold00029 463451 1 C T scaffold4961 ScafM INDEL 0008.scaffold00029 463627 15 ATCAGAGAAGAAGAA ............... scaffold4961 Both SNP 0008.scaffold00029 463678 1 A G scaffold4961 Both SNP 0008.scaffold00029 463686 1 C A scaffold4961 Both SNP 0008.scaffold00029 464036 1 A C scaffold4961 Both SNP 0008.scaffold00029 464048 1 A G scaffold4961 Both SNP 0008.scaffold00029 464220 1 A G scaffold4961 Both INDEL 0008.scaffold00029 464291 2 .. GT scaffold4961 Both SNP 0008.scaffold00029 464438 1 T A scaffold4961 Both SNP 0008.scaffold00029 465092 1 C T scaffold4961 Both SNP 0008.scaffold00029 465123 1 T A scaffold4961 Both SNP 0008.scaffold00029 465530 1 T C scaffold4961 Both SNP 0008.scaffold00029 465592 1 C A scaffold4961 Both SNP 0008.scaffold00029 465745 1 C G scaffold4961 ScafM SNP 0008.scaffold00029 465950 1 T A scaffold4961 ScafM SNP 0008.scaffold00029 466557 1 G C scaffold3460 Both SNP 0008.scaffold00029 466776 1 T G scaffold3460 ReadM INDEL 0008.scaffold00029 466982 1 A . - ScafM INDEL 0008.scaffold00029 466982 2 AA .T scaffold3460 Both SNP 0008.scaffold00029 467010 1 G C scaffold3460 Both INDEL 0008.scaffold00029 467125 1 . A scaffold3460 Both SNP 0008.scaffold00029 467612 1 C T scaffold3460 ScafM SNP 0008.scaffold00029 467780 1 C T scaffold3460 ScafM SNP 0008.scaffold00029 467890 1 G T scaffold3460 ScafM SNP 0008.scaffold00029 468163 1 C G scaffold3460 Both SNP 0008.scaffold00029 468358 1 C T scaffold3460 ScafM SNP 0008.scaffold00029 468632 1 G A scaffold3460 ScafM SNP 0008.scaffold00029 468672 1 G A scaffold3460 ScafM INDEL 0008.scaffold00029 468756 5 CCCAC ..... scaffold3460 ScafM SNP 0008.scaffold00029 468770 1 C A scaffold3460 Both SNP 0008.scaffold00029 468872 1 C T scaffold3460 ScafM SNP 0008.scaffold00029 469101 3 ATT CCA scaffold3460 Both SNP 0008.scaffold00029 469325 1 C A scaffold3460 Both SNP 0008.scaffold00029 469535 1 A G scaffold3460 ScafM SNP 0008.scaffold00029 469617 1 T C scaffold3460 Both SNP 0008.scaffold00029 469755 1 T C scaffold3460 Both SNP 0008.scaffold00029 470066 1 A T scaffold3460 ScafM SNP 0008.scaffold00029 470228 1 C G scaffold3460 ReadM SNP 0008.scaffold00029 470745 1 T C - ReadM SNP 0008.scaffold00029 470751 1 A G - ReadM SNP 0008.scaffold00029 470825 1 C T - ReadM SNP 0008.scaffold00029 470936 1 C T - ReadM SNP 0008.scaffold00029 471077 1 C T - ReadM SNP 0008.scaffold00029 471241 1 G C - ReadM SNP 0008.scaffold00029 471791 1 A T - ReadM INDEL 0008.scaffold00029 472094 1 A . - ReadM SNP 0008.scaffold00029 472213 1 T C - ReadM SNP 0008.scaffold00029 472859 1 A G - ReadM SNP 0008.scaffold00029 473202 1 G A - ReadM SNP 0008.scaffold00029 473398 1 C T - ReadM INDEL 0008.scaffold00029 473636 1 . T - ReadM SNP 0008.scaffold00029 473767 1 C A - ReadM SNP 0008.scaffold00029 473814 1 T C - Both SNP 0008.scaffold00029 474180 1 A T scaffold3460 Both SNP 0008.scaffold00029 474251 1 T C scaffold3460 Both SNP 0008.scaffold00029 474475 1 A G scaffold3460 Both SNP 0008.scaffold00029 475061 1 C T scaffold3460 Both SNP 0008.scaffold00029 476131 1 T C scaffold3460 Both SNP 0008.scaffold00029 476231 1 A C scaffold3460 ScafM SNP 0008.scaffold00029 476422 1 T C scaffold3460 Both SNP 0008.scaffold00029 476456 1 A G scaffold3460 ReadM SNP 0008.scaffold00029 476892 1 C T - Both INDEL 0008.scaffold00029 477610 1 . A scaffold3460 Both SNP 0008.scaffold00029 478201 1 T C scaffold3460 ScafM SNP 0008.scaffold00029 480250 1 T A scaffold3460 ReadM SNP 0008.scaffold00029 480999 1 T A - ReadM SNP 0008.scaffold00029 481056 1 G A - ReadM SNP 0008.scaffold00029 481498 1 T C - ReadM SNP 0008.scaffold00029 481881 1 C T - ReadM SNP 0008.scaffold00029 483191 1 T C - ReadM SNP 0008.scaffold00029 483216 1 C A - ReadM SNP 0008.scaffold00029 483954 1 C A - ReadM SNP 0008.scaffold00029 483997 1 G A - ReadM SNP 0008.scaffold00029 484544 1 G C - ReadM SNP 0008.scaffold00029 484658 1 G A - ScafM SNP 0008.scaffold00029 487927 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 488443 1 G A scaffold12968 Both SNP 0008.scaffold00029 488448 1 C T scaffold12968 Both SNP 0008.scaffold00029 488560 1 A G scaffold12968 Both SNP 0008.scaffold00029 488984 1 T A scaffold12968 Both SNP 0008.scaffold00029 489035 1 T C scaffold12968 Both SNP 0008.scaffold00029 489418 1 C T scaffold12968 Both SNP 0008.scaffold00029 489467 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 489609 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 489623 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 489718 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 490052 1 G A scaffold12968 Both SNP 0008.scaffold00029 491126 1 A C scaffold12968 Both SNP 0008.scaffold00029 491221 1 T C scaffold12968 Both SNP 0008.scaffold00029 491339 1 C T scaffold12968 Both INDEL 0008.scaffold00029 491417 2 .. TC scaffold12968 Both SNP 0008.scaffold00029 491431 1 C T scaffold12968 Both SNP 0008.scaffold00029 491612 1 T C scaffold12968 Both INDEL 0008.scaffold00029 491654 2 .. CT scaffold12968 Both SNP 0008.scaffold00029 491913 1 A C scaffold12968 Both SNP 0008.scaffold00029 491916 1 A G scaffold12968 Both SNP 0008.scaffold00029 491923 1 A C scaffold12968 Both SNP 0008.scaffold00029 491949 1 A G scaffold12968 Both SNP 0008.scaffold00029 491994 1 A C scaffold12968 Both SNP 0008.scaffold00029 492082 1 T G scaffold12968 Both SNP 0008.scaffold00029 492084 1 G A scaffold12968 Both SNP 0008.scaffold00029 492166 1 A T scaffold12968 Both SNP 0008.scaffold00029 492192 1 A T scaffold12968 Both SNP 0008.scaffold00029 492196 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 492266 1 G A scaffold12968 Both SNP 0008.scaffold00029 492422 1 T C scaffold12968 Both SNP 0008.scaffold00029 492426 1 G T scaffold12968 Both INDEL 0008.scaffold00029 492472 1 T . scaffold12968 Both SNP 0008.scaffold00029 492509 1 A G scaffold12968 ScafM INDEL 0008.scaffold00029 492612 1 . A scaffold12968 Both SNP 0008.scaffold00029 492710 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 492721 1 G C scaffold12968 ScafM SNP 0008.scaffold00029 492733 1 A G scaffold12968 Both SNP 0008.scaffold00029 492841 1 T C scaffold12968 Both SNP 0008.scaffold00029 492961 1 A G scaffold12968 Both SNP 0008.scaffold00029 493081 1 T A scaffold12968 ScafM INDEL 0008.scaffold00029 493089 3 ... CAA scaffold12968 ScafM INDEL 0008.scaffold00029 493345 4 .... TTTT scaffold12968 Both SNP 0008.scaffold00029 493901 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 493912 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 493919 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 493963 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 493966 1 T C scaffold12968 Both SNP 0008.scaffold00029 494038 1 A G scaffold12968 Both SNP 0008.scaffold00029 494361 1 A G scaffold12968 Both SNP 0008.scaffold00029 494454 1 G C scaffold12968 Both SNP 0008.scaffold00029 494460 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 494752 1 T G scaffold12968 Both SNP 0008.scaffold00029 495308 1 A C scaffold12968 Both SNP 0008.scaffold00029 495665 1 A G scaffold12968 ReadM INDEL 0008.scaffold00029 496308 1 A . - ReadM SNP 0008.scaffold00029 496331 1 G A - ReadM INDEL 0008.scaffold00029 496392 2 TT .. - ReadM SNP 0008.scaffold00029 496494 1 C T - ReadM SNP 0008.scaffold00029 496603 1 C T - ReadM SNP 0008.scaffold00029 496645 1 T G - Both SNP 0008.scaffold00029 496833 1 G C scaffold12968 Both SNP 0008.scaffold00029 496861 1 G A scaffold12968 Both SNP 0008.scaffold00029 496950 1 C T scaffold12968 Both SNP 0008.scaffold00029 496977 1 T C scaffold12968 Both SNP 0008.scaffold00029 497014 1 A G scaffold12968 Both SNP 0008.scaffold00029 497066 1 G C scaffold12968 Both SNP 0008.scaffold00029 497070 1 G A scaffold12968 Both SNP 0008.scaffold00029 497139 1 A C scaffold12968 Both SNP 0008.scaffold00029 497189 1 A G scaffold12968 ScafM INDEL 0008.scaffold00029 497222 3 TTT ... scaffold12968 ScafM SNP 0008.scaffold00029 497236 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 497256 2 AT .. scaffold12968 ScafM INDEL 0008.scaffold00029 497266 1 . A scaffold12968 ScafM INDEL 0008.scaffold00029 497272 1 . T scaffold12968 Both INDEL 0008.scaffold00029 497286 1 . A scaffold12968 Both SNP 0008.scaffold00029 497458 1 A G scaffold12968 Both SNP 0008.scaffold00029 497572 1 T C scaffold12968 Both SNP 0008.scaffold00029 497646 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 497719 1 C G scaffold12968 Both SNP 0008.scaffold00029 497880 1 T C scaffold12968 Both SNP 0008.scaffold00029 497915 1 G A scaffold12968 Both INDEL 0008.scaffold00029 497967 3 ... CTT scaffold12968 Both SNP 0008.scaffold00029 498053 1 C T scaffold12968 Both SNP 0008.scaffold00029 498222 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 498449 1 T G scaffold12968 Both SNP 0008.scaffold00029 498525 1 A G scaffold12968 Both SNP 0008.scaffold00029 498527 1 A G scaffold12968 Both SNP 0008.scaffold00029 498561 1 G T scaffold12968 Both SNP 0008.scaffold00029 498581 1 C T scaffold12968 Both SNP 0008.scaffold00029 498683 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 498738 2 AA TG scaffold12968 Both SNP 0008.scaffold00029 499045 1 C G scaffold12968 Both SNP 0008.scaffold00029 499091 1 T A scaffold12968 Both SNP 0008.scaffold00029 499111 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 499146 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 499204 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 499216 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 499219 1 G T scaffold12968 ScafM INDEL 0008.scaffold00029 499264 10 GCGAAGAAGA .......... scaffold12968 ScafM SNP 0008.scaffold00029 499320 1 T G scaffold12968 ScafM INDEL 0008.scaffold00029 499355 30 ATTTTTTTTAGAATCAGAAAAAGGAAGGAG .............................. scaffold12968 ScafM SNP 0008.scaffold00029 499396 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 499419 2 .. GG scaffold12968 ScafM INDEL 0008.scaffold00029 499430 1 G . scaffold12968 ScafM SNP 0008.scaffold00029 499457 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 499462 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 499487 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 499489 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 499499 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 499524 1 G T scaffold12968 ScafM INDEL 0008.scaffold00029 499538 1 G . scaffold12968 ScafM SNP 0008.scaffold00029 499568 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 500751 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 500762 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 500862 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 500868 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 501129 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 501177 1 T A scaffold12968 Both SNP 0008.scaffold00029 501231 1 T A scaffold12968 Both SNP 0008.scaffold00029 501247 1 T C scaffold12968 Both SNP 0008.scaffold00029 501306 1 A G scaffold12968 Both SNP 0008.scaffold00029 501414 1 A G scaffold12968 Both SNP 0008.scaffold00029 501553 1 G C scaffold12968 ReadM SNP 0008.scaffold00029 501576 1 C G - ReadM SNP 0008.scaffold00029 501605 1 A G - ReadM SNP 0008.scaffold00029 501641 1 C T - Both SNP 0008.scaffold00029 501741 1 A T scaffold12968 Both SNP 0008.scaffold00029 501804 1 A T scaffold12968 Both SNP 0008.scaffold00029 501839 1 C T scaffold12968 Both SNP 0008.scaffold00029 501939 1 T C scaffold12968 ReadM SNP 0008.scaffold00029 501973 1 T C - ReadM SNP 0008.scaffold00029 502072 1 A G - Both SNP 0008.scaffold00029 502170 1 C G scaffold12968 Both SNP 0008.scaffold00029 502180 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 502394 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 502434 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 502453 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 502471 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 502532 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 502569 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 503628 1 A G scaffold7225 ScafM SNP 0008.scaffold00029 503639 1 A G scaffold7225 ScafM SNP 0008.scaffold00029 503665 1 G A scaffold7225 ScafM SNP 0008.scaffold00029 503671 1 C T scaffold7225 ReadM SNP 0008.scaffold00029 504516 1 T A - ReadM SNP 0008.scaffold00029 504558 1 C T - ReadM SNP 0008.scaffold00029 504606 1 A T - ReadM SNP 0008.scaffold00029 504663 1 T C - ReadM SNP 0008.scaffold00029 504772 1 T G - ReadM SNP 0008.scaffold00029 504815 1 G T - ReadM SNP 0008.scaffold00029 504932 1 C T - ReadM SNP 0008.scaffold00029 505068 1 A C - ReadM SNP 0008.scaffold00029 505310 1 T C - ReadM SNP 0008.scaffold00029 505372 1 A G - Both SNP 0008.scaffold00029 505420 1 T G scaffold12968 ScafM INDEL 0008.scaffold00029 505466 28 TTAAGTTTTACCAAAAAAAAAAGGTGAA ............................ scaffold12968 ScafM SNP 0008.scaffold00029 505505 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 505508 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 505541 1 T C scaffold12968 Both SNP 0008.scaffold00029 505565 1 G T scaffold12968 Both SNP 0008.scaffold00029 505586 1 C A scaffold12968 Both SNP 0008.scaffold00029 505614 1 G T scaffold12968 Both SNP 0008.scaffold00029 505688 1 G A scaffold12968 Both SNP 0008.scaffold00029 505727 1 T A scaffold12968 Both SNP 0008.scaffold00029 505916 1 C T scaffold12968 Both SNP 0008.scaffold00029 505956 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 505990 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 505996 2 AG GC scaffold12968 ScafM SNP 0008.scaffold00029 506011 1 C T scaffold12968 Both SNP 0008.scaffold00029 506039 1 G A scaffold12968 Both SNP 0008.scaffold00029 506097 1 A G scaffold12968 Both SNP 0008.scaffold00029 506260 1 A G scaffold12968 Both INDEL 0008.scaffold00029 506380 2 .. AT scaffold12968 Both INDEL 0008.scaffold00029 506467 1 . C scaffold12968 Both SNP 0008.scaffold00029 506495 1 A T scaffold12968 Both SNP 0008.scaffold00029 506512 1 G A scaffold12968 Both SNP 0008.scaffold00029 506570 1 C T scaffold12968 Both INDEL 0008.scaffold00029 506582 1 . A scaffold12968 Both SNP 0008.scaffold00029 506904 1 T G scaffold12968 ScafM INDEL 0008.scaffold00029 506954 8 ........ TCAAGACT scaffold12968 ScafM SNP 0008.scaffold00029 507023 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 507107 1 C . scaffold12968 ScafM SNP 0008.scaffold00029 507118 1 C A scaffold12968 Both INDEL 0008.scaffold00029 507206 2 TA .. scaffold12968 Both SNP 0008.scaffold00029 507285 1 T A scaffold12968 Both SNP 0008.scaffold00029 507323 1 A T scaffold12968 Both SNP 0008.scaffold00029 507373 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 507512 4 ATTA .... scaffold12968 ScafM INDEL 0008.scaffold00029 507552 2 .. TC scaffold12968 Both SNP 0008.scaffold00029 507839 1 G A scaffold12968 Both SNP 0008.scaffold00029 507848 1 G A scaffold12968 Both SNP 0008.scaffold00029 507880 1 T G scaffold12968 Both SNP 0008.scaffold00029 507885 1 C T scaffold12968 Both SNP 0008.scaffold00029 507927 1 C G scaffold12968 ReadM SNP 0008.scaffold00029 508098 1 A C - ReadM SNP 0008.scaffold00029 508236 1 G A - ReadM INDEL 0008.scaffold00029 508276 1 . T - ReadM SNP 0008.scaffold00029 508310 1 T A - Both SNP 0008.scaffold00029 508362 1 C T scaffold12968 Both INDEL 0008.scaffold00029 508384 1 A . scaffold12968 Both SNP 0008.scaffold00029 508410 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 508568 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 508583 2 GG .. scaffold12968 ScafM SNP 0008.scaffold00029 508586 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 508594 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 508603 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 508607 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 508654 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 508657 1 G . scaffold12968 ScafM SNP 0008.scaffold00029 508668 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 508680 1 . G scaffold12968 Both SNP 0008.scaffold00029 508800 1 C A scaffold12968 Both SNP 0008.scaffold00029 508808 1 G T scaffold12968 Both SNP 0008.scaffold00029 508843 1 A T scaffold12968 Both INDEL 0008.scaffold00029 508970 1 . T scaffold12968 Both SNP 0008.scaffold00029 508995 1 A G scaffold12968 ReadM SNP 0008.scaffold00029 509020 1 A G - ReadM SNP 0008.scaffold00029 509221 1 G A - ReadM INDEL 0008.scaffold00029 509239 2 .. CA - ReadM SNP 0008.scaffold00029 509486 1 T C - ReadM SNP 0008.scaffold00029 509600 1 A G - ReadM SNP 0008.scaffold00029 509684 1 C T - ReadM SNP 0008.scaffold00029 509719 1 C T - ReadM SNP 0008.scaffold00029 509794 1 A C - ReadM SNP 0008.scaffold00029 509994 1 G C - ReadM SNP 0008.scaffold00029 510016 1 A T - ScafM SNP 0008.scaffold00029 510044 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 510086 1 T C scaffold12968 Both SNP 0008.scaffold00029 510182 1 T C scaffold12968 Both INDEL 0008.scaffold00029 510193 1 A . scaffold12968 ScafM SNP 0008.scaffold00029 510200 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 510222 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 510236 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 510238 1 G A scaffold12968 Both SNP 0008.scaffold00029 510255 1 G C scaffold12968 ReadM SNP 0008.scaffold00029 510388 1 G A - ReadM SNP 0008.scaffold00029 510400 1 A C - ReadM SNP 0008.scaffold00029 510426 1 G T - ScafM SNP 0008.scaffold00029 510527 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 510550 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 510555 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 510590 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 510594 1 G C scaffold12968 ScafM SNP 0008.scaffold00029 510596 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 510598 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 510658 4 TAAG .... scaffold12968 ScafM SNP 0008.scaffold00029 510985 1 G C scaffold12968 ScafM SNP 0008.scaffold00029 511351 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 511369 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 511423 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 511432 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 511459 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 511580 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 511587 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 511602 1 A . scaffold12968 ScafM SNP 0008.scaffold00029 511604 2 TG CT scaffold12968 ScafM INDEL 0008.scaffold00029 511618 2 .. TT scaffold12968 ScafM SNP 0008.scaffold00029 511628 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 511634 1 A T scaffold12968 Both SNP 0008.scaffold00029 512170 1 A T scaffold12968 Both INDEL 0008.scaffold00029 512195 1 G . scaffold12968 Both SNP 0008.scaffold00029 512199 1 G C scaffold12968 Both SNP 0008.scaffold00029 512225 1 G T scaffold12968 Both INDEL 0008.scaffold00029 512240 1 A . scaffold12968 ScafM SNP 0008.scaffold00029 512243 1 A G scaffold12968 Both INDEL 0008.scaffold00029 512363 1 . T scaffold12968 ScafM SNP 0008.scaffold00029 512375 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 512394 2 GC AT scaffold12968 Both SNP 0008.scaffold00029 512457 1 C A scaffold12968 Both SNP 0008.scaffold00029 512461 1 A C scaffold12968 Both SNP 0008.scaffold00029 512474 1 G A scaffold12968 Both SNP 0008.scaffold00029 512518 1 G T scaffold12968 Both SNP 0008.scaffold00029 512544 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 512610 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 512615 2 .. TT scaffold12968 ScafM SNP 0008.scaffold00029 512629 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 512631 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 512654 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 512658 1 C T scaffold12968 Both SNP 0008.scaffold00029 512716 1 A T scaffold12968 ReadM SNP 0008.scaffold00029 512776 1 G T - ReadM SNP 0008.scaffold00029 512813 1 T C - ReadM SNP 0008.scaffold00029 512836 1 C T - ReadM SNP 0008.scaffold00029 512853 1 T C - ReadM SNP 0008.scaffold00029 512953 1 T C - ReadM SNP 0008.scaffold00029 512955 1 G A - ReadM SNP 0008.scaffold00029 512964 1 T C - ReadM SNP 0008.scaffold00029 513439 1 C T - ReadM SNP 0008.scaffold00029 513456 1 G A - ReadM SNP 0008.scaffold00029 513468 1 A G - ReadM SNP 0008.scaffold00029 513649 1 A T - ScafM SNP 0008.scaffold00029 513902 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 513905 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 513925 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 513929 4 .... ATTC scaffold12968 ScafM SNP 0008.scaffold00029 513933 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 513935 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 513943 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 513957 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 513962 1 . T scaffold12968 ScafM SNP 0008.scaffold00029 513984 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 513996 1 T . scaffold12968 ScafM SNP 0008.scaffold00029 514012 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 514043 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 514051 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514106 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 514115 2 GG AA scaffold12968 ScafM SNP 0008.scaffold00029 514120 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 514328 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 514335 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514358 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 514387 1 . T scaffold12968 ScafM INDEL 0008.scaffold00029 514403 11 AGAGGCCATTA ........... scaffold12968 ScafM SNP 0008.scaffold00029 514422 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514467 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 514477 4 .... CTCG scaffold12968 ScafM SNP 0008.scaffold00029 514488 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514507 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 514581 1 T C scaffold12968 ScafM INDEL 0008.scaffold00029 514588 7 CTTTTAA ....... scaffold12968 ScafM INDEL 0008.scaffold00029 514622 2 .. AT scaffold12968 ScafM SNP 0008.scaffold00029 514631 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 514675 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 514714 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 514804 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 514818 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514821 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 514823 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 514838 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 514865 2 GA AG scaffold12968 ScafM SNP 0008.scaffold00029 514868 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 514897 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 514917 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 514924 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 514935 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 515026 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 515029 1 A G scaffold12968 ScafM INDEL 0008.scaffold00029 515037 1 A . scaffold12968 ScafM SNP 0008.scaffold00029 515057 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 515060 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 515063 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 515066 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 515074 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 515144 1 G T scaffold12968 ScafM INDEL 0008.scaffold00029 515175 1 . T scaffold12968 ScafM SNP 0008.scaffold00029 515187 1 T C scaffold12968 Both SNP 0008.scaffold00029 515279 1 A T scaffold12968 Both INDEL 0008.scaffold00029 515284 1 T . scaffold12968 ScafM SNP 0008.scaffold00029 515341 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 515366 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 515397 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 515400 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 515408 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 515424 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 515469 4 CACC AGAT scaffold12968 ScafM SNP 0008.scaffold00029 515542 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 515563 2 CC TG scaffold12968 ScafM SNP 0008.scaffold00029 515567 1 T G scaffold12968 ReadM SNP 0008.scaffold00029 515771 1 T C - ReadM SNP 0008.scaffold00029 515816 1 A G - ReadM SNP 0008.scaffold00029 515823 1 G A - ReadM SNP 0008.scaffold00029 515864 1 T C - ReadM SNP 0008.scaffold00029 515869 1 C T - ReadM SNP 0008.scaffold00029 515893 1 T C - ScafM SNP 0008.scaffold00029 515959 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 515968 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 515973 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 515997 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 516000 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 516010 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 516058 1 T C scaffold12968 Both INDEL 0008.scaffold00029 516111 1 C . scaffold12968 ScafM SNP 0008.scaffold00029 516148 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 516165 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 516171 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 516199 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 516216 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 516218 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 516245 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 516257 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 516276 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 516300 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 516307 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 516316 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 516364 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 516375 7 AAGCACC ....... scaffold12968 ScafM INDEL 0008.scaffold00029 516384 4 AGCT .... scaffold12968 ScafM INDEL 0008.scaffold00029 516389 2 CT .. scaffold12968 ScafM SNP 0008.scaffold00029 516407 2 GG AC scaffold12968 ScafM SNP 0008.scaffold00029 516414 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 516415 1 . C scaffold12968 ScafM SNP 0008.scaffold00029 516417 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 516440 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 516447 11 TTTCTCGAGAG ........... scaffold12968 ScafM SNP 0008.scaffold00029 516487 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 516525 2 TT GA scaffold12968 ScafM SNP 0008.scaffold00029 516547 2 AG CT scaffold12968 ScafM SNP 0008.scaffold00029 516559 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 516588 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 516638 1 A G scaffold12968 ReadM INDEL 0008.scaffold00029 516765 1 . C - ScafM SNP 0008.scaffold00029 517077 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 517090 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 517107 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 517112 1 T G scaffold12968 ScafM SNP 0008.scaffold00029 517129 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 517155 2 CC TT scaffold12968 ScafM SNP 0008.scaffold00029 517160 1 C A scaffold12968 ScafM INDEL 0008.scaffold00029 517171 2 AC .. scaffold12968 ReadM SNP 0008.scaffold00029 517399 1 C T - ReadM SNP 0008.scaffold00029 517406 1 T C - ScafM SNP 0008.scaffold00029 517576 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 517578 1 G A scaffold12968 ReadM SNP 0008.scaffold00029 517651 1 G C - ReadM SNP 0008.scaffold00029 517675 1 C T - ReadM SNP 0008.scaffold00029 517704 1 A G - ScafM SNP 0008.scaffold00029 517834 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 517851 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 517963 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 517967 1 A C scaffold12968 ScafM SNP 0008.scaffold00029 518017 1 A C scaffold12968 ScafM INDEL 0008.scaffold00029 518033 3 .AA TTT scaffold12968 ScafM SNP 0008.scaffold00029 518069 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 518145 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 518192 1 T A scaffold12968 ScafM INDEL 0008.scaffold00029 518336 2 .. TT scaffold12968 ScafM SNP 0008.scaffold00029 518337 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 518365 1 G T scaffold12968 Both SNP 0008.scaffold00029 518488 1 A T scaffold12968 ScafM INDEL 0008.scaffold00029 518611 1 . C scaffold12968 ScafM SNP 0008.scaffold00029 518640 2 TT AC scaffold12968 ReadM SNP 0008.scaffold00029 518939 1 T A - ReadM SNP 0008.scaffold00029 518979 1 T C - Both SNP 0008.scaffold00029 519099 1 A T scaffold12968 Both SNP 0008.scaffold00029 519140 1 G T scaffold12968 Both SNP 0008.scaffold00029 519330 1 C T scaffold12968 Both SNP 0008.scaffold00029 519335 1 A C scaffold12968 Both SNP 0008.scaffold00029 519824 1 T A scaffold12968 ScafM INDEL 0008.scaffold00029 519962 4 TGAT .... scaffold12968 ScafM SNP 0008.scaffold00029 519976 1 T G scaffold12968 Both SNP 0008.scaffold00029 519986 1 T C scaffold12968 Both SNP 0008.scaffold00029 520037 1 A G scaffold12968 Both SNP 0008.scaffold00029 520109 1 C G scaffold12968 Both SNP 0008.scaffold00029 520179 1 C T scaffold12968 Both SNP 0008.scaffold00029 520213 1 C A scaffold12968 ScafM SNP 0008.scaffold00029 520231 1 A G scaffold12968 ScafM INDEL 0008.scaffold00029 520239 6 ...... AATTTT scaffold12968 ScafM INDEL 0008.scaffold00029 520397 3 ... CCT scaffold12968 Both SNP 0008.scaffold00029 520422 1 A G scaffold12968 Both INDEL 0008.scaffold00029 520571 1 . C scaffold12968 Both INDEL 0008.scaffold00029 520597 2 AT .. scaffold12968 Both SNP 0008.scaffold00029 520862 1 G T scaffold12968 ScafM INDEL 0008.scaffold00029 520955 13 ............. TTTTTTTTTTTTT scaffold12968 Both SNP 0008.scaffold00029 521430 1 G C scaffold12968 Both SNP 0008.scaffold00029 521804 1 T A scaffold12968 Both INDEL 0008.scaffold00029 522094 2 TT .. scaffold12968 ReadM SNP 0008.scaffold00029 522294 1 A C - ReadM SNP 0008.scaffold00029 522312 1 G A - ReadM SNP 0008.scaffold00029 522328 1 A G - ReadM SNP 0008.scaffold00029 522473 1 C T - ReadM SNP 0008.scaffold00029 522482 1 A G - ReadM SNP 0008.scaffold00029 522526 1 G T - ReadM SNP 0008.scaffold00029 522646 1 C T - ReadM SNP 0008.scaffold00029 522852 1 C T - Both SNP 0008.scaffold00029 523004 1 C T scaffold12968 Both INDEL 0008.scaffold00029 523037 2 .. AA scaffold12968 Both INDEL 0008.scaffold00029 523074 2 TG .. scaffold12968 Both SNP 0008.scaffold00029 523232 1 A G scaffold12968 Both INDEL 0008.scaffold00029 523290 1 A . scaffold12968 Both SNP 0008.scaffold00029 523303 1 T G scaffold12968 Both SNP 0008.scaffold00029 523320 1 C T scaffold12968 Both SNP 0008.scaffold00029 523340 1 G A scaffold12968 Both INDEL 0008.scaffold00029 523486 1 . A scaffold12968 Both SNP 0008.scaffold00029 523527 1 C T scaffold12968 Both SNP 0008.scaffold00029 523567 1 C T scaffold12968 Both SNP 0008.scaffold00029 523573 1 C T scaffold12968 ScafM INDEL 0008.scaffold00029 523632 3 TAT ... scaffold12968 Both SNP 0008.scaffold00029 523666 1 G T scaffold12968 Both SNP 0008.scaffold00029 523766 1 A G scaffold12968 Both SNP 0008.scaffold00029 523907 1 A G scaffold12968 ReadM INDEL 0008.scaffold00029 523976 1 T . - ScafM INDEL 0008.scaffold00029 523976 2 TT .G scaffold12968 ScafM INDEL 0008.scaffold00029 524004 5 AATTT ..... scaffold12968 Both INDEL 0008.scaffold00029 524159 1 G . scaffold12968 Both SNP 0008.scaffold00029 524318 1 G A scaffold12968 Both SNP 0008.scaffold00029 524324 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 524353 1 A T scaffold12968 ScafM SNP 0008.scaffold00029 524588 1 G C scaffold12968 ScafM SNP 0008.scaffold00029 524664 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 524666 1 A T scaffold12968 ScafM INDEL 0008.scaffold00029 524675 2 TA .. scaffold12968 ScafM SNP 0008.scaffold00029 524690 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 524708 1 G C scaffold12968 ScafM SNP 0008.scaffold00029 524721 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 524751 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 524762 1 C G scaffold12968 ScafM SNP 0008.scaffold00029 524789 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 524807 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 524832 1 C A scaffold12968 ScafM INDEL 0008.scaffold00029 524859 2 .. TC scaffold12968 ScafM SNP 0008.scaffold00029 525132 1 T C scaffold12968 ScafM SNP 0008.scaffold00029 525197 1 A G scaffold12968 ScafM SNP 0008.scaffold00029 525225 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 525258 1 C G scaffold12968 ScafM INDEL 0008.scaffold00029 525453 4 .... GTCC scaffold12968 ScafM SNP 0008.scaffold00029 525481 1 T A scaffold12968 ScafM SNP 0008.scaffold00029 525486 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 525502 1 C T scaffold12968 ScafM SNP 0008.scaffold00029 525509 1 G T scaffold12968 ScafM SNP 0008.scaffold00029 525514 1 G A scaffold12968 ScafM SNP 0008.scaffold00029 525530 1 G A scaffold12968 ScafM INDEL 0008.scaffold00029 525986 4 GCTA .... scaffold12614 ScafM SNP 0008.scaffold00029 526034 1 C T scaffold12614 ScafM SNP 0008.scaffold00029 526039 1 T C scaffold12614 ScafM SNP 0008.scaffold00029 526139 1 A C scaffold12614 ScafM SNP 0008.scaffold00029 526249 1 A G scaffold12614 ScafM SNP 0008.scaffold00029 526259 1 T C scaffold12614 ScafM SNP 0008.scaffold00029 526262 1 G A scaffold12614 ScafM SNP 0008.scaffold00029 526274 1 C T scaffold12614 ScafM SNP 0008.scaffold00029 526371 1 T A scaffold12614 ReadM SNP 0008.scaffold00029 526555 1 G C - ScafM SNP 0008.scaffold00029 527094 1 A T scaffold36 ScafM SNP 0008.scaffold00029 527102 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527105 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527107 1 A C scaffold36 ScafM INDEL 0008.scaffold00029 527116 6 ATCACT ...... scaffold36 ScafM SNP 0008.scaffold00029 527127 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527129 1 A T scaffold36 ScafM SNP 0008.scaffold00029 527137 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527140 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527155 1 T G scaffold36 ScafM SNP 0008.scaffold00029 527158 1 C G scaffold36 ScafM INDEL 0008.scaffold00029 527160 4 CATT .... scaffold36 ScafM INDEL 0008.scaffold00029 527167 2 AA .. scaffold36 ScafM SNP 0008.scaffold00029 527170 2 CC GG scaffold36 ScafM SNP 0008.scaffold00029 527175 1 A T scaffold36 ScafM INDEL 0008.scaffold00029 527184 1 C . scaffold36 ScafM SNP 0008.scaffold00029 527189 2 CC AG scaffold36 ScafM SNP 0008.scaffold00029 527194 2 AT CC scaffold36 ScafM SNP 0008.scaffold00029 527203 1 C A scaffold36 ScafM SNP 0008.scaffold00029 527210 1 G A scaffold36 ScafM SNP 0008.scaffold00029 527225 1 A T scaffold36 ScafM SNP 0008.scaffold00029 527230 2 AC GA scaffold36 ScafM SNP 0008.scaffold00029 527237 1 A G scaffold36 ScafM SNP 0008.scaffold00029 527255 1 A C scaffold36 ScafM SNP 0008.scaffold00029 527273 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527282 1 G T scaffold36 ScafM SNP 0008.scaffold00029 527287 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527290 1 G T scaffold36 ScafM SNP 0008.scaffold00029 527295 1 T A scaffold36 ScafM SNP 0008.scaffold00029 527300 1 C A scaffold36 ScafM SNP 0008.scaffold00029 527305 1 G T scaffold36 ScafM SNP 0008.scaffold00029 527312 2 CA AC scaffold36 ScafM SNP 0008.scaffold00029 527315 1 A G scaffold36 ScafM SNP 0008.scaffold00029 527317 1 C G scaffold36 ScafM SNP 0008.scaffold00029 527319 1 T G scaffold36 ScafM SNP 0008.scaffold00029 527321 2 CC TG scaffold36 ScafM SNP 0008.scaffold00029 527324 1 C A scaffold36 ScafM SNP 0008.scaffold00029 527331 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527333 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527350 2 GA AT scaffold36 ScafM SNP 0008.scaffold00029 527357 1 A G scaffold36 ScafM SNP 0008.scaffold00029 527371 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527383 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527390 1 A G scaffold36 ScafM INDEL 0008.scaffold00029 527405 1 G . scaffold36 ReadM SNP 0008.scaffold00029 527407 1 T C - ScafM INDEL 0008.scaffold00029 527407 1 . C scaffold36 ScafM SNP 0008.scaffold00029 527409 1 G C scaffold36 Both SNP 0008.scaffold00029 527414 1 G A scaffold36 ScafM SNP 0008.scaffold00029 527422 2 GT AG scaffold36 ScafM SNP 0008.scaffold00029 527427 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527432 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527438 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527441 1 A C scaffold36 ScafM SNP 0008.scaffold00029 527453 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527462 1 C G scaffold36 ReadM SNP 0008.scaffold00029 527477 1 C T - ScafM SNP 0008.scaffold00029 527486 1 A G scaffold36 ScafM SNP 0008.scaffold00029 527490 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527493 2 GT CC scaffold36 ScafM SNP 0008.scaffold00029 527499 1 T G scaffold36 ScafM INDEL 0008.scaffold00029 527501 1 . T scaffold36 ScafM SNP 0008.scaffold00029 527504 1 T G scaffold36 ScafM INDEL 0008.scaffold00029 527507 1 G . scaffold36 ScafM SNP 0008.scaffold00029 527510 1 A T scaffold36 ScafM SNP 0008.scaffold00029 527521 1 C T scaffold36 ScafM SNP 0008.scaffold00029 527525 1 T C scaffold36 ScafM SNP 0008.scaffold00029 527626 1 T C scaffold36 Both SNP 0008.scaffold00029 527678 1 A C scaffold36 ScafM SNP 0008.scaffold00029 527701 1 A C scaffold36 ScafM SNP 0008.scaffold00029 527724 1 A G scaffold36 ScafM SNP 0008.scaffold00029 527767 1 A C scaffold36 ScafM SNP 0008.scaffold00029 527815 2 AC CA scaffold36 ScafM SNP 0008.scaffold00029 527870 1 A C scaffold36 Both SNP 0008.scaffold00029 527941 1 C T scaffold36 ScafM SNP 0008.scaffold00029 528098 1 T G scaffold36 Both SNP 0008.scaffold00029 528113 1 A C scaffold36 ScafM SNP 0008.scaffold00029 528164 1 T C scaffold36 Both INDEL 0008.scaffold00029 528226 1 T . scaffold36 ScafM INDEL 0008.scaffold00029 528268 3 ... AAG scaffold36 Both SNP 0008.scaffold00029 528339 1 G C scaffold36 Both INDEL 0008.scaffold00029 528386 1 T . scaffold36 Both SNP 0008.scaffold00029 528444 1 T C scaffold36 Both SNP 0008.scaffold00029 528455 1 A G scaffold36 ScafM INDEL 0008.scaffold00029 528620 1 C . scaffold36 ScafM INDEL 0008.scaffold00029 528762 4 .... CAAA scaffold36 ScafM INDEL 0008.scaffold00029 528763 1 . C scaffold36 ScafM SNP 0008.scaffold00029 528807 1 A G scaffold36 ScafM INDEL 0008.scaffold00029 528808 1 . A scaffold36 ScafM SNP 0008.scaffold00029 529144 1 A C scaffold36 ScafM INDEL 0008.scaffold00029 529200 3 AAT ... scaffold36 ScafM SNP 0008.scaffold00029 529228 1 T A scaffold36 ReadM SNP 0008.scaffold00029 529463 1 G T - ReadM SNP 0008.scaffold00029 529473 1 A G - ReadM SNP 0008.scaffold00029 529479 1 C T - ReadM SNP 0008.scaffold00029 529584 1 C T - ReadM SNP 0008.scaffold00029 529596 1 A G - ReadM SNP 0008.scaffold00029 529741 1 G A - ReadM INDEL 0008.scaffold00029 529744 1 . T - ReadM SNP 0008.scaffold00029 529787 1 T C - ScafM SNP 0008.scaffold00029 535079 1 C A scaffold36 ScafM SNP 0008.scaffold00029 535089 1 T A scaffold36 Both SNP 0008.scaffold00029 535107 1 T C scaffold36 Both SNP 0008.scaffold00029 535261 1 C A scaffold36 Both SNP 0008.scaffold00029 535283 1 G A scaffold36 ScafM SNP 0008.scaffold00029 535682 1 C T scaffold36 ScafM SNP 0008.scaffold00029 535687 1 G A scaffold36 ScafM SNP 0008.scaffold00029 535693 1 A G scaffold36 ScafM SNP 0008.scaffold00029 535701 1 C T scaffold36 ScafM SNP 0008.scaffold00029 535712 1 T G scaffold36 ScafM SNP 0008.scaffold00029 535724 1 T C scaffold36 ScafM SNP 0008.scaffold00029 535763 1 A C scaffold36 ScafM SNP 0008.scaffold00029 535790 1 A G scaffold36 ScafM SNP 0008.scaffold00029 535793 1 G A scaffold36 ScafM SNP 0008.scaffold00029 535808 1 T A scaffold36 ScafM INDEL 0008.scaffold00029 535812 1 . T scaffold36 ScafM SNP 0008.scaffold00029 535834 1 C A scaffold36 ScafM SNP 0008.scaffold00029 535843 2 CG TT scaffold36 ScafM SNP 0008.scaffold00029 535847 1 A T scaffold36 ScafM SNP 0008.scaffold00029 535920 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 535995 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 536034 1 A T scaffold7130 ScafM INDEL 0008.scaffold00029 536106 2 TA .. scaffold7130 ScafM SNP 0008.scaffold00029 536122 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 536308 1 T A scaffold7130 ScafM SNP 0008.scaffold00029 536344 1 C G scaffold7130 ScafM SNP 0008.scaffold00029 536362 1 T C scaffold7130 ScafM INDEL 0008.scaffold00029 536372 2 .A TC scaffold7130 ScafM SNP 0008.scaffold00029 536379 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 536400 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 536402 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 536411 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 536439 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 536447 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 536455 1 T A scaffold7130 ScafM INDEL 0008.scaffold00029 536470 10 .......... CAATATTCAC scaffold7130 ScafM INDEL 0008.scaffold00029 536535 1 . C scaffold7130 ScafM SNP 0008.scaffold00029 536551 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 536557 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 536562 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 536581 1 T A scaffold7130 ScafM SNP 0008.scaffold00029 536649 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 536750 2 TG AA scaffold7130 ScafM SNP 0008.scaffold00029 536753 5 TTGTT AAAAA scaffold7130 ScafM SNP 0008.scaffold00029 536759 9 CGTTTGGTT AAAAAAAAA scaffold7130 ScafM SNP 0008.scaffold00029 536807 1 A T scaffold7130 ScafM SNP 0008.scaffold00029 536826 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 536918 1 T G scaffold3370 ScafM SNP 0008.scaffold00029 537026 1 T C scaffold3370 ScafM SNP 0008.scaffold00029 537038 1 G A scaffold3370 ScafM INDEL 0008.scaffold00029 537044 1 G . scaffold3370 ScafM SNP 0008.scaffold00029 537046 1 C A scaffold3370 ScafM SNP 0008.scaffold00029 537049 1 C A scaffold3370 ScafM SNP 0008.scaffold00029 537064 1 T G scaffold3370 ScafM SNP 0008.scaffold00029 537079 1 C A scaffold3370 ScafM SNP 0008.scaffold00029 537207 1 C G scaffold3370 ScafM SNP 0008.scaffold00029 545409 1 A G scaffold7130 ScafM INDEL 0008.scaffold00029 545432 16 TCGAACCAGGGTGAAC ................ scaffold7130 ScafM SNP 0008.scaffold00029 545790 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 545811 1 C G scaffold7130 ScafM SNP 0008.scaffold00029 545841 1 A G scaffold7130 ScafM INDEL 0008.scaffold00029 545850 1 T . scaffold7130 ScafM INDEL 0008.scaffold00029 545881 1 . T scaffold7130 ScafM SNP 0008.scaffold00029 545883 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 545926 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 545929 1 G C scaffold7130 ScafM INDEL 0008.scaffold00029 545943 1 T . scaffold7130 Both INDEL 0008.scaffold00029 546012 1 . T scaffold7130 Both SNP 0008.scaffold00029 546028 1 A G scaffold7130 Both SNP 0008.scaffold00029 546046 1 A T scaffold7130 Both SNP 0008.scaffold00029 546107 1 T C scaffold7130 Both SNP 0008.scaffold00029 546132 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 546154 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 546178 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 546201 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 546210 1 A G scaffold7130 ScafM INDEL 0008.scaffold00029 546237 8 AGTTATGT ........ scaffold7130 ScafM INDEL 0008.scaffold00029 546290 4 AAGT .... scaffold7130 ScafM SNP 0008.scaffold00029 546298 1 T A scaffold7130 ScafM SNP 0008.scaffold00029 546334 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 546358 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 546364 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 546372 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 546379 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 546403 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 546457 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 546474 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 546507 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 546517 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 546519 1 G A scaffold7130 Both SNP 0008.scaffold00029 546562 1 A C scaffold7130 ScafM SNP 0008.scaffold00029 546660 1 G C scaffold7130 Both SNP 0008.scaffold00029 546847 1 A C scaffold7130 Both SNP 0008.scaffold00029 546850 1 G C scaffold7130 ScafM SNP 0008.scaffold00029 546856 1 A C scaffold7130 ScafM SNP 0008.scaffold00029 546928 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 546930 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 546949 1 G C scaffold7130 Both SNP 0008.scaffold00029 546967 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 547039 1 A C scaffold7130 ScafM SNP 0008.scaffold00029 547110 1 C T scaffold7130 Both SNP 0008.scaffold00029 547120 1 A T scaffold7130 Both SNP 0008.scaffold00029 547297 1 A G scaffold7130 Both SNP 0008.scaffold00029 547303 1 T G scaffold7130 Both SNP 0008.scaffold00029 547394 1 T A scaffold7130 ReadM INDEL 0008.scaffold00029 547404 1 . A - ScafM INDEL 0008.scaffold00029 547404 2 .T AA scaffold7130 Both SNP 0008.scaffold00029 547537 1 G T scaffold7130 Both INDEL 0008.scaffold00029 547544 1 T . scaffold7130 Both SNP 0008.scaffold00029 547729 1 C T scaffold7130 Both SNP 0008.scaffold00029 547737 1 A G scaffold7130 ScafM INDEL 0008.scaffold00029 547766 8 ........ GACTGAGT scaffold7130 Both SNP 0008.scaffold00029 547861 1 T A scaffold7130 Both SNP 0008.scaffold00029 548024 1 T C scaffold7130 Both SNP 0008.scaffold00029 548064 1 T G scaffold7130 ScafM SNP 0008.scaffold00029 548139 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 548144 1 C A scaffold7130 ReadM SNP 0008.scaffold00029 548360 1 A G - Both SNP 0008.scaffold00029 548444 1 A T scaffold7130 Both SNP 0008.scaffold00029 548449 1 C T scaffold7130 Both SNP 0008.scaffold00029 548512 1 G A scaffold7130 ReadM INDEL 0008.scaffold00029 548749 1 . T - ReadM SNP 0008.scaffold00029 548836 1 C T - ReadM SNP 0008.scaffold00029 548860 1 G T - ReadM SNP 0008.scaffold00029 548882 1 A C - ReadM SNP 0008.scaffold00029 548908 1 G A - ReadM SNP 0008.scaffold00029 548923 1 C A - ReadM SNP 0008.scaffold00029 549014 1 A G - ReadM SNP 0008.scaffold00029 549029 1 C T - ReadM SNP 0008.scaffold00029 549127 1 A G - ReadM SNP 0008.scaffold00029 549176 1 A G - ReadM SNP 0008.scaffold00029 549203 1 A G - Both SNP 0008.scaffold00029 549305 1 T C scaffold7130 Both SNP 0008.scaffold00029 549387 1 T A scaffold7130 Both SNP 0008.scaffold00029 549488 1 C T scaffold7130 Both SNP 0008.scaffold00029 549492 1 C T scaffold7130 Both SNP 0008.scaffold00029 549584 1 T C scaffold7130 Both SNP 0008.scaffold00029 549615 1 T C scaffold7130 Both SNP 0008.scaffold00029 549716 1 T G scaffold7130 ReadM INDEL 0008.scaffold00029 549772 1 C . - ReadM SNP 0008.scaffold00029 549813 1 G A - ReadM SNP 0008.scaffold00029 549854 1 G T - ReadM SNP 0008.scaffold00029 549953 1 G A - Both SNP 0008.scaffold00029 550063 1 C T scaffold7130 Both SNP 0008.scaffold00029 550206 1 G A scaffold7130 ReadM INDEL 0008.scaffold00029 550243 1 . C - ReadM SNP 0008.scaffold00029 550268 1 C T - ReadM SNP 0008.scaffold00029 550295 1 T C - ReadM SNP 0008.scaffold00029 550311 1 G A - ReadM SNP 0008.scaffold00029 550405 1 C G - Both SNP 0008.scaffold00029 550462 1 A C scaffold7130 Both SNP 0008.scaffold00029 550502 1 C A scaffold7130 Both SNP 0008.scaffold00029 550509 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 550522 1 A C scaffold7130 ScafM SNP 0008.scaffold00029 550526 1 C A scaffold7130 Both SNP 0008.scaffold00029 550539 1 T G scaffold7130 Both INDEL 0008.scaffold00029 550568 1 . C scaffold7130 Both SNP 0008.scaffold00029 550639 1 C A scaffold7130 ScafM INDEL 0008.scaffold00029 550807 1 . G scaffold7130 ScafM SNP 0008.scaffold00029 550810 1 T G scaffold7130 ScafM SNP 0008.scaffold00029 550812 1 C T scaffold7130 Both SNP 0008.scaffold00029 550834 1 T G scaffold7130 Both SNP 0008.scaffold00029 550843 1 C G scaffold7130 ReadM SNP 0008.scaffold00029 550906 1 T C - ReadM SNP 0008.scaffold00029 551036 1 T C - ReadM SNP 0008.scaffold00029 551038 1 G C - ReadM SNP 0008.scaffold00029 551077 1 G A - ReadM SNP 0008.scaffold00029 551135 1 C T - ReadM SNP 0008.scaffold00029 551159 1 A C - ReadM SNP 0008.scaffold00029 551218 1 A G - ReadM SNP 0008.scaffold00029 551233 1 A C - ReadM SNP 0008.scaffold00029 551459 1 G A - ReadM SNP 0008.scaffold00029 551550 1 T C - ReadM INDEL 0008.scaffold00029 551603 1 . C - ReadM SNP 0008.scaffold00029 551650 1 C T - ReadM SNP 0008.scaffold00029 551709 1 T C - ReadM SNP 0008.scaffold00029 551719 1 A G - ReadM SNP 0008.scaffold00029 552003 1 A G - ReadM SNP 0008.scaffold00029 552009 1 C G - ReadM SNP 0008.scaffold00029 552124 1 A G - ReadM SNP 0008.scaffold00029 552300 1 C G - ReadM SNP 0008.scaffold00029 552312 1 T C - ReadM SNP 0008.scaffold00029 552359 1 G C - ReadM SNP 0008.scaffold00029 552435 1 A C - ReadM SNP 0008.scaffold00029 552450 1 C A - ReadM SNP 0008.scaffold00029 552495 1 G C - ReadM SNP 0008.scaffold00029 552598 1 A G - ReadM SNP 0008.scaffold00029 552630 1 C T - ReadM SNP 0008.scaffold00029 552712 1 C G - ReadM SNP 0008.scaffold00029 552779 1 A G - ReadM SNP 0008.scaffold00029 552784 1 G A - ReadM SNP 0008.scaffold00029 552812 1 T G - ReadM SNP 0008.scaffold00029 552968 1 T C - ReadM SNP 0008.scaffold00029 553005 1 T G - ReadM SNP 0008.scaffold00029 553258 1 G A - ReadM INDEL 0008.scaffold00029 553283 1 . G - ReadM SNP 0008.scaffold00029 553288 1 C T - ReadM SNP 0008.scaffold00029 553318 1 G T - ReadM SNP 0008.scaffold00029 553415 1 G C - ReadM SNP 0008.scaffold00029 553443 1 G A - ReadM SNP 0008.scaffold00029 553446 1 C T - ReadM SNP 0008.scaffold00029 553496 2 CC TA - ReadM SNP 0008.scaffold00029 553568 1 G T - ReadM SNP 0008.scaffold00029 553640 1 A G - ReadM SNP 0008.scaffold00029 553676 1 G A - ReadM SNP 0008.scaffold00029 553696 1 T C - ReadM SNP 0008.scaffold00029 553775 1 T C - ReadM SNP 0008.scaffold00029 553777 1 G A - ReadM SNP 0008.scaffold00029 553784 1 T C - ReadM SNP 0008.scaffold00029 553841 1 C A - ReadM SNP 0008.scaffold00029 553853 1 G T - ReadM SNP 0008.scaffold00029 553865 1 C A - ReadM SNP 0008.scaffold00029 554006 1 T C - ReadM SNP 0008.scaffold00029 554047 1 T C - ReadM SNP 0008.scaffold00029 554061 1 C T - ReadM SNP 0008.scaffold00029 554063 1 C T - ReadM SNP 0008.scaffold00029 554120 1 A C - ReadM SNP 0008.scaffold00029 554210 1 T C - ReadM SNP 0008.scaffold00029 554257 1 C T - ReadM SNP 0008.scaffold00029 554259 1 C T - ReadM SNP 0008.scaffold00029 554309 1 G T - ReadM SNP 0008.scaffold00029 554332 1 T C - ReadM SNP 0008.scaffold00029 554365 1 A G - ReadM SNP 0008.scaffold00029 554383 1 G T - ReadM SNP 0008.scaffold00029 554556 1 A G - ScafM SNP 0008.scaffold00029 554805 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 554809 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 554975 1 T A scaffold7130 ReadM SNP 0008.scaffold00029 556685 1 T G - Both SNP 0008.scaffold00029 556728 1 T A scaffold7130 Both SNP 0008.scaffold00029 556751 1 A C scaffold7130 Both SNP 0008.scaffold00029 556797 1 T G scaffold7130 ScafM INDEL 0008.scaffold00029 556855 8 ........ AGTCAAAG scaffold7130 Both INDEL 0008.scaffold00029 557041 1 A . scaffold7130 ScafM SNP 0008.scaffold00029 557062 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 557071 1 A C scaffold7130 ReadM INDEL 0008.scaffold00029 557086 1 . C - ReadM SNP 0008.scaffold00029 557121 1 C T - ReadM SNP 0008.scaffold00029 557190 1 T A - ReadM SNP 0008.scaffold00029 558167 1 T C - Both SNP 0008.scaffold00029 558239 1 A G scaffold7130 Both SNP 0008.scaffold00029 558265 1 T G scaffold7130 ScafM INDEL 0008.scaffold00029 558551 6 .....A GTTGGT scaffold7130 ScafM SNP 0008.scaffold00029 558578 1 A G scaffold7130 ScafM INDEL 0008.scaffold00029 558622 2 .. TT scaffold7130 ScafM SNP 0008.scaffold00029 558624 1 A T scaffold7130 ScafM SNP 0008.scaffold00029 558643 1 T A scaffold7130 ScafM SNP 0008.scaffold00029 558744 1 T A scaffold7130 ScafM SNP 0008.scaffold00029 558766 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 558771 1 G A scaffold7130 ScafM INDEL 0008.scaffold00029 559328 7 GCCTTTA ....... scaffold7130 Both SNP 0008.scaffold00029 559454 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 559479 1 C G scaffold7130 ScafM SNP 0008.scaffold00029 559527 1 T C scaffold7130 Both SNP 0008.scaffold00029 559595 1 T A scaffold7130 ReadM SNP 0008.scaffold00029 559737 1 T A - ReadM SNP 0008.scaffold00029 560010 1 C T - ScafM SNP 0008.scaffold00029 560102 1 T A scaffold7130 Both SNP 0008.scaffold00029 560166 1 G A scaffold7130 ReadM INDEL 0008.scaffold00029 560224 1 . T - ReadM SNP 0008.scaffold00029 560295 1 G A - ReadM SNP 0008.scaffold00029 560440 1 G A - ReadM SNP 0008.scaffold00029 560463 1 G T - ScafM SNP 0008.scaffold00029 560697 2 CC TG scaffold7130 ScafM SNP 0008.scaffold00029 560710 1 C A scaffold7130 ReadM SNP 0008.scaffold00029 561145 1 C T - ReadM SNP 0008.scaffold00029 561166 1 C T - ReadM SNP 0008.scaffold00029 561181 1 A G - ScafM SNP 0008.scaffold00029 561267 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 561289 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 561305 1 T C scaffold7130 ScafM INDEL 0008.scaffold00029 561309 5 AAATA ....G scaffold7130 ScafM INDEL 0008.scaffold00029 561323 3 GCC ... scaffold7130 ScafM INDEL 0008.scaffold00029 561334 8 TACATAGC ........ scaffold7130 ScafM SNP 0008.scaffold00029 561359 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 561369 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 561458 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 561461 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 561471 1 A C scaffold7130 ScafM INDEL 0008.scaffold00029 561485 7 ....... CAAGGGC scaffold7130 ScafM SNP 0008.scaffold00029 561502 1 C G scaffold7130 ScafM SNP 0008.scaffold00029 561527 1 A T scaffold7130 ScafM SNP 0008.scaffold00029 561615 1 C G scaffold7130 ScafM SNP 0008.scaffold00029 561635 1 A C scaffold7130 ScafM SNP 0008.scaffold00029 561649 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 561651 1 G C scaffold7130 ScafM SNP 0008.scaffold00029 561671 1 A C scaffold7130 Both SNP 0008.scaffold00029 561682 1 G A scaffold7130 Both SNP 0008.scaffold00029 561761 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 562803 1 C T scaffold7130 ReadM SNP 0008.scaffold00029 563334 1 A T - ScafM SNP 0008.scaffold00029 563564 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 563576 2 AG GA scaffold7130 ScafM INDEL 0008.scaffold00029 563605 22 ...................... TATTTTTTAATAATCCAATCTT scaffold7130 ScafM SNP 0008.scaffold00029 563630 1 C T scaffold7130 ScafM SNP 0008.scaffold00029 563633 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 563683 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 563688 1 G T scaffold7130 Both SNP 0008.scaffold00029 563723 1 G T scaffold7130 ScafM SNP 0008.scaffold00029 563744 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 563755 1 T C scaffold7130 ScafM SNP 0008.scaffold00029 563793 1 C A scaffold7130 ScafM SNP 0008.scaffold00029 563804 1 G A scaffold7130 ScafM SNP 0008.scaffold00029 563811 1 G C scaffold7130 ScafM SNP 0008.scaffold00029 563829 1 G A scaffold7130 ScafM INDEL 0008.scaffold00029 563858 1 T . scaffold7130 ScafM SNP 0008.scaffold00029 563860 1 C G scaffold7130 ReadM INDEL 0008.scaffold00029 564118 1 . A - ReadM SNP 0008.scaffold00029 564136 1 T C - ReadM SNP 0008.scaffold00029 564200 1 A C - ReadM SNP 0008.scaffold00029 564251 1 T C - ReadM SNP 0008.scaffold00029 564261 1 C T - ReadM SNP 0008.scaffold00029 564315 1 A C - ReadM SNP 0008.scaffold00029 564332 1 G A - ReadM SNP 0008.scaffold00029 564345 1 C G - ScafM SNP 0008.scaffold00029 564606 1 A G scaffold7130 ScafM SNP 0008.scaffold00029 565059 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 565085 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 565169 1 C A scaffold3131 ScafM SNP 0008.scaffold00029 565172 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 565175 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 565179 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 565183 5 TTGTG CAAAA scaffold3131 ScafM SNP 0008.scaffold00029 565190 1 A T scaffold3131 Both SNP 0008.scaffold00029 565333 1 A T scaffold3131 ReadM SNP 0008.scaffold00029 565384 1 G A - ReadM SNP 0008.scaffold00029 565468 1 G A - ReadM SNP 0008.scaffold00029 565533 1 G C - ReadM SNP 0008.scaffold00029 565688 1 T A - ReadM SNP 0008.scaffold00029 565742 1 G T - ReadM SNP 0008.scaffold00029 565782 1 T C - Both SNP 0008.scaffold00029 565894 1 G T scaffold3131 Both INDEL 0008.scaffold00029 565934 1 A . scaffold3131 Both SNP 0008.scaffold00029 566100 1 T C scaffold3131 Both SNP 0008.scaffold00029 566157 1 G C scaffold3131 ReadM SNP 0008.scaffold00029 566305 1 C T - ScafM INDEL 0008.scaffold00029 567155 2 CG .. scaffold3131 ScafM INDEL 0008.scaffold00029 567177 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 567179 2 AT TA scaffold3131 ScafM SNP 0008.scaffold00029 567217 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 567260 1 A C scaffold3131 ScafM INDEL 0008.scaffold00029 567336 1 . T scaffold3131 ScafM SNP 0008.scaffold00029 567414 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 567427 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 567729 1 . C scaffold3131 ScafM SNP 0008.scaffold00029 568075 1 A C scaffold3131 Both INDEL 0008.scaffold00029 568244 3 ATT ... scaffold3131 ScafM SNP 0008.scaffold00029 568353 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 568393 1 A C scaffold3131 Both SNP 0008.scaffold00029 568471 1 G T scaffold3131 Both SNP 0008.scaffold00029 568484 1 A C scaffold3131 Both INDEL 0008.scaffold00029 568517 2 AA .. scaffold3131 Both SNP 0008.scaffold00029 568616 1 T C scaffold3131 Both INDEL 0008.scaffold00029 568743 2 AA .. scaffold3131 Both SNP 0008.scaffold00029 568820 1 A G scaffold3131 Both SNP 0008.scaffold00029 568853 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 568868 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 568891 1 T C scaffold3131 ScafM INDEL 0008.scaffold00029 568924 2 .. AA scaffold3131 ScafM SNP 0008.scaffold00029 568963 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 570160 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 570188 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 570242 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 570312 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 570327 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 570331 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 570410 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 570427 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 570507 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 570514 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 570535 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 570537 1 C G scaffold3131 ScafM SNP 0008.scaffold00029 570583 1 A C scaffold3131 ScafM INDEL 0008.scaffold00029 570593 1 . C scaffold3131 ScafM SNP 0008.scaffold00029 570607 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 570643 1 C G scaffold3131 ScafM SNP 0008.scaffold00029 570713 2 TG CA scaffold3131 ScafM SNP 0008.scaffold00029 570805 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 573508 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 573510 1 T C scaffold3131 ScafM INDEL 0008.scaffold00029 573579 1 . C scaffold3131 ScafM SNP 0008.scaffold00029 573585 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 573595 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 573614 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 573634 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 573652 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 573790 1 G A scaffold3131 ReadM SNP 0008.scaffold00029 573944 1 T G - ReadM SNP 0008.scaffold00029 573946 1 T A - ReadM SNP 0008.scaffold00029 573972 1 A C - ReadM SNP 0008.scaffold00029 574051 1 T C - ReadM SNP 0008.scaffold00029 574108 1 C T - ReadM SNP 0008.scaffold00029 574255 1 C T - ReadM INDEL 0008.scaffold00029 574277 1 C . - ScafM SNP 0008.scaffold00029 574722 1 C T scaffold3131 ScafM INDEL 0008.scaffold00029 574763 3 TAA ... scaffold3131 ScafM SNP 0008.scaffold00029 574782 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 574794 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 574796 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 574949 1 G C scaffold862 ScafM SNP 0008.scaffold00029 574959 1 A G scaffold862 ScafM SNP 0008.scaffold00029 574972 1 A C scaffold862 ScafM SNP 0008.scaffold00029 575013 1 C A scaffold862 ScafM SNP 0008.scaffold00029 575015 1 A C scaffold862 ScafM SNP 0008.scaffold00029 575018 1 G A scaffold862 ScafM INDEL 0008.scaffold00029 575031 5 TAATG ..... scaffold862 ScafM INDEL 0008.scaffold00029 575044 1 C . scaffold862 ScafM SNP 0008.scaffold00029 575054 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575059 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575066 1 A G scaffold862 ScafM INDEL 0008.scaffold00029 575097 1 . T scaffold862 ScafM INDEL 0008.scaffold00029 575099 2 .. AT scaffold862 ScafM INDEL 0008.scaffold00029 575100 2 .A GC scaffold862 ScafM INDEL 0008.scaffold00029 575102 1 . A scaffold862 ScafM SNP 0008.scaffold00029 575116 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575133 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575140 1 T C scaffold862 ScafM SNP 0008.scaffold00029 575171 1 T C scaffold862 ScafM SNP 0008.scaffold00029 575173 1 T G scaffold862 ScafM SNP 0008.scaffold00029 575176 1 T C scaffold862 ScafM SNP 0008.scaffold00029 575181 2 CG TA scaffold862 ScafM SNP 0008.scaffold00029 575196 1 G A scaffold862 ScafM SNP 0008.scaffold00029 575210 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575226 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575233 1 T C scaffold862 ScafM SNP 0008.scaffold00029 575240 1 C G scaffold862 ScafM SNP 0008.scaffold00029 575249 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575262 1 C G scaffold862 ScafM SNP 0008.scaffold00029 575268 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575271 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575280 1 A C scaffold862 ScafM SNP 0008.scaffold00029 575289 2 AG GA scaffold862 ScafM SNP 0008.scaffold00029 575295 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575307 1 A G scaffold862 ScafM SNP 0008.scaffold00029 575313 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575321 1 G T scaffold862 ScafM SNP 0008.scaffold00029 575323 1 T G scaffold862 ScafM SNP 0008.scaffold00029 575339 1 T G scaffold862 ScafM SNP 0008.scaffold00029 575353 1 C T scaffold862 ScafM SNP 0008.scaffold00029 575361 1 C T scaffold862 ReadM SNP 0008.scaffold00029 576786 1 A T - ReadM INDEL 0008.scaffold00029 576832 1 . T - ScafM SNP 0008.scaffold00029 581501 1 T G scaffold3131 ScafM INDEL 0008.scaffold00029 581504 1 A . scaffold3131 ScafM INDEL 0008.scaffold00029 581535 1 A . scaffold3131 ScafM SNP 0008.scaffold00029 581538 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 581563 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 581568 1 A G scaffold3131 ReadM SNP 0008.scaffold00029 582120 1 G C - ReadM SNP 0008.scaffold00029 582131 1 A G - ReadM SNP 0008.scaffold00029 582161 1 G A - ReadM SNP 0008.scaffold00029 582223 1 G A - ReadM SNP 0008.scaffold00029 582267 1 T C - ReadM SNP 0008.scaffold00029 582294 1 C T - ReadM SNP 0008.scaffold00029 582312 1 G A - ReadM SNP 0008.scaffold00029 582485 1 C G - ReadM SNP 0008.scaffold00029 582520 1 A G - ReadM SNP 0008.scaffold00029 582635 1 T C - ReadM SNP 0008.scaffold00029 582644 1 G C - ReadM SNP 0008.scaffold00029 582730 1 A G - ReadM SNP 0008.scaffold00029 582740 1 C T - ReadM SNP 0008.scaffold00029 582748 1 A G - ReadM INDEL 0008.scaffold00029 582816 1 . A - ReadM SNP 0008.scaffold00029 582841 1 C A - ReadM SNP 0008.scaffold00029 583005 1 T C - ReadM SNP 0008.scaffold00029 583020 1 C A - ReadM SNP 0008.scaffold00029 583032 1 T C - ReadM SNP 0008.scaffold00029 583125 1 A G - ReadM SNP 0008.scaffold00029 583129 1 C A - ReadM SNP 0008.scaffold00029 583157 1 G A - ReadM SNP 0008.scaffold00029 583225 1 C A - ReadM SNP 0008.scaffold00029 583322 1 A T - ReadM SNP 0008.scaffold00029 583348 1 C A - ReadM SNP 0008.scaffold00029 583378 1 G C - ReadM SNP 0008.scaffold00029 583434 1 G T - ReadM SNP 0008.scaffold00029 583458 1 G A - ReadM SNP 0008.scaffold00029 583563 1 A G - ReadM SNP 0008.scaffold00029 583575 1 G A - ReadM SNP 0008.scaffold00029 583620 1 T C - ReadM INDEL 0008.scaffold00029 583656 1 . A - ReadM INDEL 0008.scaffold00029 583681 1 . C - ReadM SNP 0008.scaffold00029 583751 1 T C - ReadM SNP 0008.scaffold00029 583807 1 C T - ReadM SNP 0008.scaffold00029 583886 1 C T - ReadM SNP 0008.scaffold00029 583897 1 A C - ReadM SNP 0008.scaffold00029 584057 1 C T - ReadM SNP 0008.scaffold00029 584064 1 C T - ReadM SNP 0008.scaffold00029 584183 1 G A - ReadM SNP 0008.scaffold00029 584195 1 C T - ReadM SNP 0008.scaffold00029 584259 1 A T - ReadM SNP 0008.scaffold00029 584275 1 T C - ReadM SNP 0008.scaffold00029 584301 1 A T - ReadM SNP 0008.scaffold00029 584401 1 C T - ReadM SNP 0008.scaffold00029 584412 1 G A - ReadM SNP 0008.scaffold00029 584464 1 T C - ReadM SNP 0008.scaffold00029 584476 1 C T - ReadM SNP 0008.scaffold00029 584494 1 A G - Both SNP 0008.scaffold00029 584538 1 C T scaffold3131 Both SNP 0008.scaffold00029 584551 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 584594 2 AT GC scaffold3131 Both SNP 0008.scaffold00029 584601 1 C T scaffold3131 Both SNP 0008.scaffold00029 584707 1 A G scaffold3131 ReadM SNP 0008.scaffold00029 584787 1 G A - ReadM SNP 0008.scaffold00029 584858 1 C T - ReadM SNP 0008.scaffold00029 584909 1 G A - ReadM SNP 0008.scaffold00029 584923 1 T C - ReadM SNP 0008.scaffold00029 585037 1 A T - ScafM INDEL 0008.scaffold00029 587630 1 . G scaffold3131 ScafM INDEL 0008.scaffold00029 587707 1 . A scaffold3131 ScafM INDEL 0008.scaffold00029 587736 1 G . scaffold3131 ScafM SNP 0008.scaffold00029 587759 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 587793 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 587836 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 587853 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 588146 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 588151 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 588166 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 588197 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 588211 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 591291 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 591295 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 591309 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 591567 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 591571 1 C G scaffold3131 ScafM SNP 0008.scaffold00029 591585 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 591607 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 591657 1 C A scaffold3131 ScafM SNP 0008.scaffold00029 591662 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 591669 1 G C scaffold3131 ScafM SNP 0008.scaffold00029 591671 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 591696 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 591733 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 591739 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 591748 1 A G scaffold3131 Both SNP 0008.scaffold00029 591815 1 T C scaffold3131 Both INDEL 0008.scaffold00029 591839 2 TG .. scaffold3131 ScafM INDEL 0008.scaffold00029 591989 10 CAAGATCCCC .......... scaffold3131 ScafM INDEL 0008.scaffold00029 592001 9 ACATCAAAC ......... scaffold3131 ScafM INDEL 0008.scaffold00029 592013 16 TTTACCCAAGTTTTTG ................ scaffold3131 ScafM INDEL 0008.scaffold00029 592031 1 T . scaffold3131 ScafM SNP 0008.scaffold00029 592041 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 592066 2 .. TT scaffold3131 ScafM INDEL 0008.scaffold00029 592070 1 . G scaffold3131 ScafM SNP 0008.scaffold00029 592087 1 T C scaffold3131 Both INDEL 0008.scaffold00029 592299 1 . A scaffold3131 Both SNP 0008.scaffold00029 592342 1 T C scaffold3131 Both INDEL 0008.scaffold00029 592346 1 . G scaffold3131 ScafM SNP 0008.scaffold00029 592495 2 AT TA scaffold3131 Both SNP 0008.scaffold00029 592597 1 C G scaffold3131 Both INDEL 0008.scaffold00029 592611 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 592613 1 T C scaffold3131 Both SNP 0008.scaffold00029 593972 1 C T scaffold3131 ScafM INDEL 0008.scaffold00029 594158 1 . T scaffold3131 Both SNP 0008.scaffold00029 594738 1 T C scaffold3131 Both SNP 0008.scaffold00029 594906 1 T C scaffold3131 Both SNP 0008.scaffold00029 595511 1 C G scaffold3131 Both SNP 0008.scaffold00029 595553 1 T G scaffold3131 Both SNP 0008.scaffold00029 595868 1 G T scaffold3131 Both SNP 0008.scaffold00029 597325 1 C T scaffold3131 Both SNP 0008.scaffold00029 598453 1 C T scaffold3131 Both INDEL 0008.scaffold00029 598501 2 AT .. scaffold3131 ScafM INDEL 0008.scaffold00029 599422 2 GG .. scaffold3131 ScafM INDEL 0008.scaffold00029 599446 4 .... GCTA scaffold3131 ScafM INDEL 0008.scaffold00029 599447 3 ... GGG scaffold3131 ReadM SNP 0008.scaffold00029 599690 1 T C - Both SNP 0008.scaffold00029 599788 1 A G scaffold3131 Both SNP 0008.scaffold00029 599866 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 602871 1 A G scaffold3131 Both SNP 0008.scaffold00029 603560 1 T C scaffold3131 ReadM SNP 0008.scaffold00029 604074 1 A T - ReadM SNP 0008.scaffold00029 604079 1 T A - ReadM SNP 0008.scaffold00029 604100 1 C T - ReadM SNP 0008.scaffold00029 604154 1 G A - ReadM SNP 0008.scaffold00029 604439 1 C T - Both SNP 0008.scaffold00029 605154 1 G A scaffold3131 ScafM INDEL 0008.scaffold00029 605197 21 ..................... AAAACTTAAGTTGGTAGCAAT scaffold3131 Both SNP 0008.scaffold00029 605266 1 C T scaffold3131 Both SNP 0008.scaffold00029 605360 1 C G scaffold3131 ScafM INDEL 0008.scaffold00029 605595 1 A . scaffold3131 ReadM SNP 0008.scaffold00029 605674 1 A G - ReadM SNP 0008.scaffold00029 605689 1 C T - ReadM SNP 0008.scaffold00029 605735 1 G A - Both SNP 0008.scaffold00029 605826 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 605943 2 AG GC scaffold3131 ScafM INDEL 0008.scaffold00029 605947 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 605967 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 605983 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 605986 1 G A scaffold3131 Both INDEL 0008.scaffold00029 606036 1 . A scaffold3131 Both SNP 0008.scaffold00029 606099 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 606211 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 606224 1 G T scaffold3131 ScafM INDEL 0008.scaffold00029 606237 1 T . scaffold3131 ScafM SNP 0008.scaffold00029 606253 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 606270 1 C G scaffold3131 ScafM SNP 0008.scaffold00029 606274 1 G A scaffold3131 ScafM INDEL 0008.scaffold00029 606282 28 ............................ TTTTTCCCTTTTCTAAATTTTACAAATA scaffold3131 ScafM INDEL 0008.scaffold00029 606285 3 ... TTA scaffold3131 ScafM INDEL 0008.scaffold00029 606289 3 ... TTT scaffold3131 ScafM INDEL 0008.scaffold00029 606290 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 606304 1 G T scaffold3131 ScafM INDEL 0008.scaffold00029 606311 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 606315 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 606318 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 606329 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 606390 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 606407 1 G C scaffold3131 ReadM SNP 0008.scaffold00029 610854 1 T G - ReadM INDEL 0008.scaffold00029 611109 1 . G - ReadM SNP 0008.scaffold00029 612801 1 T C - ReadM SNP 0008.scaffold00029 612893 1 G A - ReadM SNP 0008.scaffold00029 614666 1 C T - ReadM SNP 0008.scaffold00029 614776 1 T C - ReadM SNP 0008.scaffold00029 614780 1 G T - ReadM SNP 0008.scaffold00029 614906 1 G A - ReadM SNP 0008.scaffold00029 614914 1 T C - ReadM SNP 0008.scaffold00029 614975 1 C G - Both SNP 0008.scaffold00029 615062 1 A C scaffold3131 Both SNP 0008.scaffold00029 615081 1 C T scaffold3131 Both SNP 0008.scaffold00029 615177 1 C A scaffold3131 Both SNP 0008.scaffold00029 615218 1 G T scaffold3131 ScafM SNP 0008.scaffold00029 615240 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 615267 1 C A scaffold3131 ScafM INDEL 0008.scaffold00029 615290 6 TTATAT ...... scaffold3131 ScafM SNP 0008.scaffold00029 615314 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 615373 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 615375 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 615452 1 T A scaffold3131 Both SNP 0008.scaffold00029 615563 1 A G scaffold3131 Both SNP 0008.scaffold00029 615573 1 G A scaffold3131 Both SNP 0008.scaffold00029 615625 1 G T scaffold3131 ReadM SNP 0008.scaffold00029 615660 1 G A - ScafM SNP 0008.scaffold00029 615844 1 C A scaffold38645 ScafM SNP 0008.scaffold00029 615869 1 G A scaffold38645 ReadM SNP 0008.scaffold00029 616192 1 G A - ReadM SNP 0008.scaffold00029 616295 1 G T - ReadM SNP 0008.scaffold00029 616302 1 C T - ReadM SNP 0008.scaffold00029 616336 1 T C - ReadM SNP 0008.scaffold00029 616350 1 T G - ReadM SNP 0008.scaffold00029 616459 1 C T - ReadM SNP 0008.scaffold00029 616511 1 T A - ReadM SNP 0008.scaffold00029 616527 1 T C - ReadM SNP 0008.scaffold00029 616597 1 G A - ReadM SNP 0008.scaffold00029 616783 1 T G - ReadM SNP 0008.scaffold00029 616892 1 T C - ReadM SNP 0008.scaffold00029 616911 1 G A - ReadM SNP 0008.scaffold00029 616956 1 T C - ReadM SNP 0008.scaffold00029 617047 1 A G - ReadM SNP 0008.scaffold00029 617098 1 G T - ReadM SNP 0008.scaffold00029 617353 1 T C - ReadM SNP 0008.scaffold00029 617355 1 G A - ReadM SNP 0008.scaffold00029 617449 1 C G - ReadM SNP 0008.scaffold00029 617486 1 A T - ScafM INDEL 0008.scaffold00029 617536 11 ........... AGATTAGGTGG scaffold3131 ScafM SNP 0008.scaffold00029 617539 1 A G scaffold3131 Both SNP 0008.scaffold00029 617583 1 G A scaffold3131 Both SNP 0008.scaffold00029 617603 1 T A scaffold3131 Both SNP 0008.scaffold00029 617635 1 C A scaffold3131 ReadM SNP 0008.scaffold00029 617959 1 C A - ReadM SNP 0008.scaffold00029 618076 1 G A - ReadM SNP 0008.scaffold00029 618084 1 T A - ReadM SNP 0008.scaffold00029 618112 1 A C - ReadM SNP 0008.scaffold00029 618178 1 T A - ReadM SNP 0008.scaffold00029 618198 1 T G - ReadM SNP 0008.scaffold00029 618243 1 C T - ReadM SNP 0008.scaffold00029 618270 1 A G - ReadM SNP 0008.scaffold00029 618282 1 A T - ReadM SNP 0008.scaffold00029 618320 1 G A - ReadM SNP 0008.scaffold00029 618338 1 T C - ReadM SNP 0008.scaffold00029 618399 1 G T - ReadM SNP 0008.scaffold00029 618411 1 G A - ReadM SNP 0008.scaffold00029 618604 1 T C - ReadM SNP 0008.scaffold00029 618617 1 A G - ReadM SNP 0008.scaffold00029 618657 1 G C - Both SNP 0008.scaffold00029 618725 1 C T scaffold3131 ReadM SNP 0008.scaffold00029 618753 1 A G - ReadM SNP 0008.scaffold00029 618896 1 G A - ReadM SNP 0008.scaffold00029 618899 1 G A - ReadM SNP 0008.scaffold00029 618906 1 G A - ReadM SNP 0008.scaffold00029 619155 1 C T - ReadM SNP 0008.scaffold00029 619160 1 A G - ReadM SNP 0008.scaffold00029 619267 1 C T - ReadM SNP 0008.scaffold00029 619426 1 G A - ReadM SNP 0008.scaffold00029 619539 1 T C - ReadM SNP 0008.scaffold00029 619547 1 C T - ReadM SNP 0008.scaffold00029 619785 1 A T - ReadM SNP 0008.scaffold00029 619835 1 T C - ReadM SNP 0008.scaffold00029 619857 1 A G - ReadM SNP 0008.scaffold00029 619861 1 G A - Both SNP 0008.scaffold00029 620101 1 T C scaffold3131 Both SNP 0008.scaffold00029 620261 1 C G scaffold3131 Both SNP 0008.scaffold00029 620300 1 C T scaffold3131 Both SNP 0008.scaffold00029 620317 1 C A scaffold3131 ReadM SNP 0008.scaffold00029 620353 1 T G - ReadM SNP 0008.scaffold00029 620356 1 T C - ReadM SNP 0008.scaffold00029 620388 1 T A - ReadM SNP 0008.scaffold00029 620458 1 A G - ReadM SNP 0008.scaffold00029 620491 1 T C - ReadM SNP 0008.scaffold00029 620497 1 C T - Both SNP 0008.scaffold00029 620579 1 G A scaffold3131 Both SNP 0008.scaffold00029 620584 1 G A scaffold3131 Both SNP 0008.scaffold00029 620653 1 A G scaffold3131 Both SNP 0008.scaffold00029 620724 1 C T scaffold3131 Both SNP 0008.scaffold00029 620773 1 C T scaffold3131 Both SNP 0008.scaffold00029 620790 1 T C scaffold3131 Both SNP 0008.scaffold00029 620796 1 G C scaffold3131 Both SNP 0008.scaffold00029 620877 1 A G scaffold3131 Both SNP 0008.scaffold00029 620883 1 C T scaffold3131 Both SNP 0008.scaffold00029 620918 1 G T scaffold3131 ScafM SNP 0008.scaffold00029 620957 1 A G scaffold3131 Both SNP 0008.scaffold00029 621088 1 G A scaffold3131 Both SNP 0008.scaffold00029 621111 1 A G scaffold3131 Both SNP 0008.scaffold00029 621226 1 G A scaffold3131 Both SNP 0008.scaffold00029 621296 1 A G scaffold3131 Both SNP 0008.scaffold00029 621314 1 T C scaffold3131 Both SNP 0008.scaffold00029 621325 1 T G scaffold3131 Both SNP 0008.scaffold00029 621341 1 G A scaffold3131 Both SNP 0008.scaffold00029 621345 1 T G scaffold3131 ScafM SNP 0008.scaffold00029 621481 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 621483 1 G T scaffold3131 Both INDEL 0008.scaffold00029 621626 1 . T scaffold3131 Both SNP 0008.scaffold00029 621633 1 C T scaffold3131 Both SNP 0008.scaffold00029 621699 1 T C scaffold3131 ReadM SNP 0008.scaffold00029 621967 1 T C - ReadM SNP 0008.scaffold00029 622017 1 C A - ReadM SNP 0008.scaffold00029 622045 1 C T - ScafM INDEL 0008.scaffold00029 623000 5 ATCGT ..... scaffold3131 ScafM SNP 0008.scaffold00029 623150 1 G A scaffold3131 ScafM INDEL 0008.scaffold00029 623162 18 .................. GGGGGGGGGGGGGGGGGG scaffold3131 ScafM SNP 0008.scaffold00029 623166 1 A G scaffold3131 ReadM SNP 0008.scaffold00029 623309 1 G T - Both SNP 0008.scaffold00029 623416 1 G T scaffold3131 Both SNP 0008.scaffold00029 623424 1 G A scaffold3131 Both SNP 0008.scaffold00029 623532 1 A G scaffold3131 ReadM INDEL 0008.scaffold00029 623555 1 . T - ReadM SNP 0008.scaffold00029 623612 1 G T - ReadM SNP 0008.scaffold00029 623645 1 G A - ReadM SNP 0008.scaffold00029 623654 1 C T - ReadM SNP 0008.scaffold00029 623711 1 T A - ReadM SNP 0008.scaffold00029 623764 1 C T - ScafM SNP 0008.scaffold00029 623903 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 623933 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 623982 1 . G scaffold3131 ScafM INDEL 0008.scaffold00029 623995 3 AAA ... scaffold3131 ScafM SNP 0008.scaffold00029 624037 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 624039 1 C T scaffold3131 ScafM INDEL 0008.scaffold00029 624135 2 .. TA scaffold3131 ScafM SNP 0008.scaffold00029 624147 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 624164 1 G A scaffold3131 ScafM INDEL 0008.scaffold00029 625941 1 A . scaffold3131 ScafM SNP 0008.scaffold00029 625986 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 625998 1 G A scaffold3131 ScafM INDEL 0008.scaffold00029 626032 6 GATGTT ...... scaffold3131 ScafM SNP 0008.scaffold00029 626096 1 T G scaffold3131 ScafM SNP 0008.scaffold00029 626164 1 G C scaffold3131 ScafM SNP 0008.scaffold00029 626181 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 626243 1 C G scaffold3131 ScafM SNP 0008.scaffold00029 626358 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 626361 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 626397 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 626419 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 626454 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 626588 1 C T scaffold3131 ScafM SNP 0008.scaffold00029 626593 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 626620 2 GA AG scaffold3131 ScafM SNP 0008.scaffold00029 626635 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 626685 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 626712 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 626730 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 627218 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 627226 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 627337 1 . A scaffold3131 Both SNP 0008.scaffold00029 627627 1 A T scaffold3131 Both SNP 0008.scaffold00029 627640 1 T C scaffold3131 Both SNP 0008.scaffold00029 628031 1 T C scaffold3131 Both SNP 0008.scaffold00029 628105 1 G C scaffold3131 ScafM INDEL 0008.scaffold00029 628143 3 GCT ... scaffold3131 ScafM SNP 0008.scaffold00029 628147 1 A C scaffold3131 ScafM INDEL 0008.scaffold00029 628167 1 . A scaffold3131 ScafM SNP 0008.scaffold00029 628351 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 628441 1 A T scaffold3131 ScafM INDEL 0008.scaffold00029 628662 1 A . scaffold3131 ScafM SNP 0008.scaffold00029 634316 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 634330 1 T C scaffold3131 ScafM SNP 0008.scaffold00029 634400 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 634472 1 G A scaffold3131 ScafM SNP 0008.scaffold00029 634508 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 634548 1 T A scaffold3131 ScafM SNP 0008.scaffold00029 634583 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 634685 1 A T scaffold3131 ScafM SNP 0008.scaffold00029 634700 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 634726 1 . C scaffold3131 ScafM INDEL 0008.scaffold00029 634728 1 . C scaffold3131 Both SNP 0008.scaffold00029 634743 1 A G scaffold3131 Both SNP 0008.scaffold00029 634806 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 634980 8 ........ TTTTGGGT scaffold3131 ScafM SNP 0008.scaffold00029 634983 1 A C scaffold3131 ScafM INDEL 0008.scaffold00029 634987 5 ..... AGAAC scaffold3131 ScafM INDEL 0008.scaffold00029 634988 2 .. CG scaffold3131 ScafM SNP 0008.scaffold00029 634990 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 634992 4 ...C AAAA scaffold3131 ScafM INDEL 0008.scaffold00029 634994 3 ... GAA scaffold3131 ScafM INDEL 0008.scaffold00029 635000 1 . A scaffold3131 ScafM INDEL 0008.scaffold00029 635004 1 . C scaffold3131 ScafM SNP 0008.scaffold00029 635006 2 CC GT scaffold3131 ScafM SNP 0008.scaffold00029 635011 1 C T scaffold3131 ScafM INDEL 0008.scaffold00029 635012 3 ... CAC scaffold3131 ScafM SNP 0008.scaffold00029 635016 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 635019 5 TGTGG ...AC scaffold3131 ScafM SNP 0008.scaffold00029 635025 1 A C scaffold3131 ScafM SNP 0008.scaffold00029 635027 1 C T scaffold3131 ScafM INDEL 0008.scaffold00029 635059 12 ............ CAACAATATAGA scaffold3131 ScafM INDEL 0008.scaffold00029 635061 3 ... TTT scaffold3131 ScafM INDEL 0008.scaffold00029 635064 33 ................................. TTCCATCAAGATTTTAACCTTGGTCTCACATGT scaffold3131 ScafM SNP 0008.scaffold00029 635131 1 A T scaffold3131 ReadM SNP 0008.scaffold00029 635354 1 A G - ReadM INDEL 0008.scaffold00029 635543 2 .. GA - ReadM SNP 0008.scaffold00029 635557 1 A G - Both SNP 0008.scaffold00029 635826 1 A C scaffold3131 Both SNP 0008.scaffold00029 635948 1 A G scaffold3131 ScafM SNP 0008.scaffold00029 636104 1 A T scaffold3131 Both SNP 0008.scaffold00029 636156 1 G T scaffold3131 Both SNP 0008.scaffold00029 636587 1 G A scaffold3131 Both INDEL 0008.scaffold00029 637378 1 T . scaffold3131 Both SNP 0008.scaffold00029 637698 1 A G scaffold3131 Both SNP 0008.scaffold00029 637826 1 T G scaffold3131 Both SNP 0008.scaffold00029 638048 1 T A scaffold3131 Both SNP 0008.scaffold00029 638085 1 A C scaffold3131 Both SNP 0008.scaffold00029 638150 1 A G scaffold3131 ScafM INDEL 0008.scaffold00029 638356 11 ........... TTTTTTGGGGG scaffold3131 ScafM SNP 0008.scaffold00029 638368 1 C G scaffold3131 ReadM INDEL 0008.scaffold00029 638406 2 TA .. - Both SNP 0008.scaffold00029 638512 1 T C scaffold3131 Both SNP 0008.scaffold00029 639240 1 T G scaffold3131 Both SNP 0008.scaffold00029 639496 1 G A scaffold3131 Both SNP 0008.scaffold00029 639696 1 T C scaffold3131 ReadM SNP 0008.scaffold00029 640046 1 C T - Both SNP 0008.scaffold00029 640126 1 A T scaffold3131 ReadM SNP 0008.scaffold00029 640241 1 A G - ReadM SNP 0008.scaffold00029 640395 1 G A - Both INDEL 0008.scaffold00029 640558 1 . C scaffold3131 Both SNP 0008.scaffold00029 640628 1 G A scaffold3131 Both SNP 0008.scaffold00029 640736 1 C T scaffold3131 ReadM SNP 0008.scaffold00029 640875 1 C T - ReadM SNP 0008.scaffold00029 640959 1 C T - ReadM SNP 0008.scaffold00029 640982 1 A G - Both SNP 0008.scaffold00029 641182 1 G C scaffold3131 Both SNP 0008.scaffold00029 641257 1 G A scaffold3131 Both SNP 0008.scaffold00029 641736 1 G T scaffold3131 Both SNP 0008.scaffold00029 642117 1 T C scaffold3131 Both SNP 0008.scaffold00029 642487 1 G C scaffold3131 ScafM INDEL 0008.scaffold00029 642546 5 GTTAT ..... scaffold3131 ScafM SNP 0008.scaffold00029 642555 1 T A scaffold3131 Both SNP 0008.scaffold00029 642899 1 C G scaffold3131 Both INDEL 0008.scaffold00029 642915 1 . T scaffold3131 Both SNP 0008.scaffold00029 642949 1 C T scaffold3131 Both INDEL 0008.scaffold00029 642999 1 T . scaffold3131 ReadM SNP 0008.scaffold00029 643176 1 C T - ScafM SNP 0008.scaffold00029 643700 1 T G scaffold3131 ReadM SNP 0008.scaffold00029 644599 1 G A - ReadM SNP 0008.scaffold00029 644817 1 G A - ReadM SNP 0008.scaffold00029 644833 1 G A - Both INDEL 0008.scaffold00029 645075 1 . G scaffold46791 Both SNP 0008.scaffold00029 645446 1 A G scaffold46791 ScafM INDEL 0008.scaffold00029 645478 6 ...... AGAAAA scaffold46791 ReadM SNP 0008.scaffold00029 645479 1 G A - ScafM INDEL 0008.scaffold00029 645479 1 . A scaffold46791 ScafM SNP 0008.scaffold00029 645679 2 GC AA scaffold46791 ScafM SNP 0008.scaffold00029 645726 2 CC TT scaffold46791 Both INDEL 0008.scaffold00029 645837 1 C . scaffold46791 ScafM INDEL 0008.scaffold00029 646110 6 ...... ATCTCC scaffold46791 ReadM INDEL 0008.scaffold00029 647638 1 . A - ReadM SNP 0008.scaffold00029 647683 1 T C - ScafM SNP 0008.scaffold00029 649238 1 G A scaffold46791 ScafM SNP 0008.scaffold00029 649379 1 A G scaffold46791 ScafM SNP 0008.scaffold00029 649537 1 T C scaffold46791 ScafM SNP 0008.scaffold00029 650807 1 G A scaffold912 ScafM SNP 0008.scaffold00029 650848 1 T G scaffold912 ScafM SNP 0008.scaffold00029 650853 1 G C scaffold912 ScafM SNP 0008.scaffold00029 650964 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651001 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651010 1 T A scaffold912 ScafM SNP 0008.scaffold00029 651038 1 A C scaffold912 ScafM SNP 0008.scaffold00029 651074 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651093 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651152 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651177 1 G T scaffold912 ScafM SNP 0008.scaffold00029 651187 1 C G scaffold912 ScafM INDEL 0008.scaffold00029 651199 1 T . scaffold912 ScafM SNP 0008.scaffold00029 651220 1 T A scaffold912 ScafM SNP 0008.scaffold00029 651229 1 C T scaffold912 ScafM SNP 0008.scaffold00029 651234 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651246 1 C A scaffold912 ScafM SNP 0008.scaffold00029 651272 1 T G scaffold912 ScafM SNP 0008.scaffold00029 651430 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651485 2 GG TA scaffold912 ScafM SNP 0008.scaffold00029 651556 1 C T scaffold912 ScafM SNP 0008.scaffold00029 651571 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651573 1 T C scaffold912 ScafM SNP 0008.scaffold00029 651600 1 G A scaffold912 ScafM SNP 0008.scaffold00029 651622 3 GTC AAA scaffold912 ScafM SNP 0008.scaffold00029 651640 1 A T scaffold912 ScafM SNP 0008.scaffold00029 651647 1 T C scaffold912 ScafM SNP 0008.scaffold00029 651658 1 G A scaffold912 Both SNP 0008.scaffold00029 651710 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651783 2 TT CC scaffold912 ScafM SNP 0008.scaffold00029 651812 1 T G scaffold912 ScafM SNP 0008.scaffold00029 651826 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651832 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651880 1 T G scaffold912 ScafM SNP 0008.scaffold00029 651903 1 T A scaffold912 ScafM SNP 0008.scaffold00029 651967 1 A G scaffold912 ScafM SNP 0008.scaffold00029 651979 1 A T scaffold912 ScafM SNP 0008.scaffold00029 651999 1 A G scaffold912 ScafM SNP 0008.scaffold00029 652052 1 A G scaffold912 ScafM SNP 0008.scaffold00029 652084 1 A G scaffold912 ScafM SNP 0008.scaffold00029 652140 1 T C scaffold912 ScafM INDEL 0008.scaffold00029 652195 1 A . scaffold912 ScafM SNP 0008.scaffold00029 652215 1 T A scaffold912 ScafM SNP 0008.scaffold00029 652220 1 T C scaffold912 ScafM SNP 0008.scaffold00029 652249 1 A G scaffold912 ScafM SNP 0008.scaffold00029 652319 1 T C scaffold912 ScafM SNP 0008.scaffold00029 652364 1 G T scaffold912 Both SNP 0008.scaffold00029 652726 1 G A scaffold16440 ReadM SNP 0008.scaffold00029 655135 1 G A - ReadM SNP 0008.scaffold00029 655157 1 T C - ReadM SNP 0008.scaffold00029 655339 1 C T - ReadM SNP 0008.scaffold00029 655820 1 A C - ReadM SNP 0008.scaffold00029 655886 1 A G - Both SNP 0008.scaffold00029 655969 1 T A scaffold16440 Both SNP 0008.scaffold00029 655974 1 A C scaffold16440 Both SNP 0008.scaffold00029 656042 1 C T scaffold16440 Both SNP 0008.scaffold00029 656103 1 G T scaffold16440 Both INDEL 0008.scaffold00029 656178 1 . A scaffold16440 Both SNP 0008.scaffold00029 656256 1 C T scaffold16440 ReadM SNP 0008.scaffold00029 656370 1 G A - ReadM SNP 0008.scaffold00029 656372 1 G A - ReadM SNP 0008.scaffold00029 656672 1 T C - ReadM SNP 0008.scaffold00029 656752 1 A G - ScafM SNP 0008.scaffold00029 657044 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 657046 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 657048 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 657052 1 T G scaffold16440 ScafM SNP 0008.scaffold00029 657090 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 657092 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 657095 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 657097 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657110 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657133 1 C A scaffold16440 ScafM SNP 0008.scaffold00029 657143 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 657173 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657198 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 657204 1 T G scaffold16440 ScafM SNP 0008.scaffold00029 657220 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 657240 1 G A scaffold16440 ScafM INDEL 0008.scaffold00029 657258 1 A . scaffold16440 ScafM SNP 0008.scaffold00029 657268 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 657299 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 657306 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657338 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 657359 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 657394 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 657402 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657415 1 G C scaffold16440 ScafM SNP 0008.scaffold00029 657427 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 657477 1 . A scaffold16440 Both SNP 0008.scaffold00029 657495 1 G C scaffold16440 Both SNP 0008.scaffold00029 657518 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 657533 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 657587 1 A T scaffold16440 Both SNP 0008.scaffold00029 657980 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 658057 3 TAA CCC scaffold16440 ScafM INDEL 0008.scaffold00029 658061 2 .T AA scaffold16440 ScafM INDEL 0008.scaffold00029 658066 1 G . scaffold16440 ScafM SNP 0008.scaffold00029 658069 2 GG AA scaffold16440 ScafM SNP 0008.scaffold00029 658073 3 TCT CAA scaffold16440 ScafM SNP 0008.scaffold00029 658078 1 C G scaffold16440 ScafM INDEL 0008.scaffold00029 658081 7 CTTAATA ....... scaffold16440 ScafM SNP 0008.scaffold00029 658090 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 658092 3 ACC TGA scaffold16440 ScafM SNP 0008.scaffold00029 658108 1 G C scaffold16440 ScafM SNP 0008.scaffold00029 658118 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 658122 1 A C scaffold16440 Both SNP 0008.scaffold00029 658149 1 T G scaffold16440 Both SNP 0008.scaffold00029 658164 1 A C scaffold16440 Both SNP 0008.scaffold00029 658182 1 C A scaffold16440 Both SNP 0008.scaffold00029 658263 1 G A scaffold16440 Both SNP 0008.scaffold00029 658297 1 G T scaffold16440 Both SNP 0008.scaffold00029 658378 1 C G scaffold16440 Both INDEL 0008.scaffold00029 658413 1 . C scaffold16440 ScafM INDEL 0008.scaffold00029 658686 7 ....... TTTGATC scaffold16440 ScafM SNP 0008.scaffold00029 658698 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 658709 3 ATC ... scaffold16440 ScafM SNP 0008.scaffold00029 658713 1 C A scaffold16440 ScafM INDEL 0008.scaffold00029 658722 4 TGTG .... scaffold16440 ScafM SNP 0008.scaffold00029 658895 1 G A scaffold16440 ScafM INDEL 0008.scaffold00029 658896 4 .... TACG scaffold16440 ScafM INDEL 0008.scaffold00029 658897 2 .. GT scaffold16440 ScafM SNP 0008.scaffold00029 658915 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659135 1 T C scaffold16440 ScafM INDEL 0008.scaffold00029 659140 2 CA .. scaffold16440 ScafM SNP 0008.scaffold00029 659145 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 659149 1 T C scaffold16440 ScafM INDEL 0008.scaffold00029 659150 1 . T scaffold16440 ScafM SNP 0008.scaffold00029 659168 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 659176 2 AG CA scaffold16440 ScafM SNP 0008.scaffold00029 659181 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659184 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659195 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 659203 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 659215 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 659230 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659235 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659240 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 659242 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 659252 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 659255 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 659497 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 659499 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 659510 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 659513 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 659521 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 659525 1 A T scaffold16440 ScafM INDEL 0008.scaffold00029 659552 1 . G scaffold16440 ScafM SNP 0008.scaffold00029 659559 1 C G scaffold16440 ScafM INDEL 0008.scaffold00029 659560 1 . G scaffold16440 ScafM SNP 0008.scaffold00029 659568 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 659588 2 CC GT scaffold16440 ScafM SNP 0008.scaffold00029 659626 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 659644 1 A T scaffold16440 ScafM INDEL 0008.scaffold00029 659663 1 . T scaffold16440 ScafM INDEL 0008.scaffold00029 659670 1 G . scaffold16440 ScafM SNP 0008.scaffold00029 660752 2 AG GA scaffold16440 ScafM SNP 0008.scaffold00029 660765 1 A G scaffold16440 ScafM INDEL 0008.scaffold00029 660782 1 . A scaffold16440 ScafM SNP 0008.scaffold00029 660784 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 660798 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 660807 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 660830 3 ATC TGT scaffold16440 ScafM SNP 0008.scaffold00029 660848 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 660854 3 CAT TCC scaffold16440 ScafM SNP 0008.scaffold00029 660859 1 G C scaffold16440 ScafM SNP 0008.scaffold00029 660868 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 660875 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 660905 1 G T scaffold16440 ScafM INDEL 0008.scaffold00029 660925 1 A . scaffold16440 ScafM SNP 0008.scaffold00029 660931 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 660961 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 660964 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 660977 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 660986 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 661015 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661032 1 A G scaffold16440 ScafM INDEL 0008.scaffold00029 661035 4 CCCC ...T scaffold16440 ScafM SNP 0008.scaffold00029 661042 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 661068 2 .. TA scaffold16440 ScafM SNP 0008.scaffold00029 661072 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661078 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661093 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 661111 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661125 1 T C scaffold16440 ScafM INDEL 0008.scaffold00029 661139 1 A . scaffold16440 ScafM INDEL 0008.scaffold00029 661141 5 ATAAA ..... scaffold16440 ScafM SNP 0008.scaffold00029 661156 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 661163 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 661175 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 661195 1 A . scaffold16440 ScafM SNP 0008.scaffold00029 661240 2 GA TG scaffold16440 ScafM SNP 0008.scaffold00029 661254 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 661270 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661321 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661357 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661366 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 661391 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 661396 2 CT TC scaffold16440 ScafM SNP 0008.scaffold00029 661626 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 661888 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 661891 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661894 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 661900 2 GC AT scaffold16440 ScafM SNP 0008.scaffold00029 661905 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661942 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 661947 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661956 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661968 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 661974 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 662037 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662044 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662050 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 662452 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 662471 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 662473 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 662496 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662504 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 662513 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662539 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662562 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662600 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662620 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 662633 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 662667 1 T G scaffold16440 ScafM INDEL 0008.scaffold00029 662669 2 TC .. scaffold16440 ScafM INDEL 0008.scaffold00029 662689 1 . G scaffold16440 ScafM SNP 0008.scaffold00029 662703 2 GT AC scaffold16440 ScafM SNP 0008.scaffold00029 662706 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662745 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662767 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 662775 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 662780 1 G T scaffold16440 ScafM SNP 0008.scaffold00029 662783 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 662796 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662798 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 662804 1 C A scaffold16440 ScafM SNP 0008.scaffold00029 662829 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 662852 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 662854 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 662860 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662877 1 T A scaffold16440 ScafM INDEL 0008.scaffold00029 662880 2 CG .T scaffold16440 ScafM SNP 0008.scaffold00029 662902 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662906 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 662919 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 662936 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 664433 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 664439 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 664447 1 C A scaffold16440 ScafM SNP 0008.scaffold00029 664455 1 C A scaffold16440 ScafM INDEL 0008.scaffold00029 664489 1 . G scaffold16440 ScafM INDEL 0008.scaffold00029 664529 5 ..... TGCTG scaffold16440 ScafM INDEL 0008.scaffold00029 664530 3 ... ATT scaffold16440 ScafM INDEL 0008.scaffold00029 665609 7 ....... TTAATAA scaffold16440 ScafM INDEL 0008.scaffold00029 665629 1 A . scaffold16440 ScafM SNP 0008.scaffold00029 665720 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 665727 1 G A scaffold16440 ScafM INDEL 0008.scaffold00029 665760 5 ..... TACGT scaffold16440 ScafM SNP 0008.scaffold00029 665784 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 665937 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 665942 1 G T scaffold16440 ScafM SNP 0008.scaffold00029 666029 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 666046 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 666055 2 TG CA scaffold16440 ScafM SNP 0008.scaffold00029 666071 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 666073 1 C A scaffold16440 ScafM SNP 0008.scaffold00029 666075 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 666090 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 666100 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 666102 2 AG GA scaffold16440 ScafM SNP 0008.scaffold00029 666109 1 T C scaffold16440 ScafM INDEL 0008.scaffold00029 666165 6 ...... ACTCAT scaffold16440 ScafM SNP 0008.scaffold00029 666175 1 C T scaffold16440 Both SNP 0008.scaffold00029 666268 1 G A scaffold16440 ScafM INDEL 0008.scaffold00029 666327 3 ATA ... scaffold16440 ScafM INDEL 0008.scaffold00029 666347 4 .... TGCA scaffold16440 ScafM SNP 0008.scaffold00029 666361 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 666363 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 666372 1 A G scaffold16440 ScafM INDEL 0008.scaffold00029 666375 1 T . scaffold16440 ScafM SNP 0008.scaffold00029 666381 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 666387 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 666398 2 TC CT scaffold16440 ScafM SNP 0008.scaffold00029 666410 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 666417 1 T G scaffold16440 ScafM INDEL 0008.scaffold00029 666421 1 T . scaffold16440 ScafM INDEL 0008.scaffold00029 666429 2 .T CG scaffold16440 ScafM SNP 0008.scaffold00029 666459 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 666852 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 666857 1 G T scaffold16440 ScafM SNP 0008.scaffold00029 666889 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 666891 1 C G scaffold16440 Both SNP 0008.scaffold00029 666932 1 C T scaffold16440 Both SNP 0008.scaffold00029 666965 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 667030 1 . C scaffold16440 ScafM SNP 0008.scaffold00029 667062 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 667126 1 G T scaffold16440 ScafM INDEL 0008.scaffold00029 667142 1 . A scaffold16440 ScafM SNP 0008.scaffold00029 667168 1 C A scaffold16440 ScafM SNP 0008.scaffold00029 667191 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 667270 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 667299 1 C T scaffold16440 ScafM INDEL 0008.scaffold00029 667356 1 . G scaffold16440 ScafM SNP 0008.scaffold00029 667362 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 667484 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 667494 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 675708 1 G C scaffold7666 ScafM SNP 0008.scaffold00029 675726 1 T C scaffold7666 ScafM SNP 0008.scaffold00029 675742 1 T C scaffold7666 ScafM SNP 0008.scaffold00029 675744 1 C T scaffold7666 ScafM INDEL 0008.scaffold00029 675748 2 .. CT scaffold7666 ScafM INDEL 0008.scaffold00029 675755 1 . A scaffold7666 ScafM INDEL 0008.scaffold00029 675759 3 ... AAA scaffold7666 ScafM SNP 0008.scaffold00029 675762 1 A T scaffold7666 ScafM SNP 0008.scaffold00029 675771 1 G A scaffold7666 ScafM SNP 0008.scaffold00029 682759 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 682763 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 682778 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 682805 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 682809 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 682814 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 682817 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 682842 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 682846 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 682861 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 682891 1 A T scaffold16440 ScafM INDEL 0008.scaffold00029 682914 5 ..... AATTT scaffold16440 ScafM SNP 0008.scaffold00029 682950 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 682969 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 682991 1 A G scaffold16440 ScafM SNP 0008.scaffold00029 683042 1 C T scaffold16440 ScafM SNP 0008.scaffold00029 683056 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 683063 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 683070 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 683076 1 T C scaffold16440 ScafM INDEL 0008.scaffold00029 683087 3 ..G AAA scaffold16440 ScafM SNP 0008.scaffold00029 683102 1 C G scaffold16440 ScafM SNP 0008.scaffold00029 683150 1 A T scaffold16440 ScafM INDEL 0008.scaffold00029 683164 7 ....... TCTAGAC scaffold16440 ScafM SNP 0008.scaffold00029 683172 1 G T scaffold16440 ScafM SNP 0008.scaffold00029 683260 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 683263 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 683299 1 G C scaffold16440 ScafM SNP 0008.scaffold00029 683302 1 T C scaffold16440 ScafM SNP 0008.scaffold00029 683325 1 G A scaffold16440 ScafM SNP 0008.scaffold00029 683328 1 A T scaffold16440 ScafM SNP 0008.scaffold00029 683355 1 T A scaffold16440 ScafM SNP 0008.scaffold00029 683403 1 T G scaffold16440 Both SNP 0008.scaffold00029 683426 1 G T scaffold16440 Both SNP 0008.scaffold00029 683442 1 A G scaffold16440 Both INDEL 0008.scaffold00029 683460 1 G . scaffold16440 Both INDEL 0008.scaffold00029 683575 1 C . scaffold16440 Both SNP 0008.scaffold00029 683630 1 C A scaffold16440 Both SNP 0008.scaffold00029 683682 1 A C scaffold16440 ScafM SNP 0008.scaffold00029 683776 1 T C scaffold16440 Both SNP 0008.scaffold00029 683880 1 C G scaffold16440 ReadM INDEL 0008.scaffold00029 683908 1 A . - ReadM SNP 0008.scaffold00029 683938 1 A G - ReadM SNP 0008.scaffold00029 684053 1 A T - ReadM SNP 0008.scaffold00029 684135 1 G A - ReadM SNP 0008.scaffold00029 684222 1 A G - ReadM SNP 0008.scaffold00029 684457 1 C T - Both SNP 0008.scaffold00029 684536 1 A G scaffold16440 ReadM SNP 0008.scaffold00029 684681 1 G A - ReadM SNP 0008.scaffold00029 684694 1 C T - Both SNP 0008.scaffold00029 684916 1 T C scaffold16440 Both SNP 0008.scaffold00029 684950 1 C T scaffold16440 Both SNP 0008.scaffold00029 685080 1 T C scaffold16440 Both SNP 0008.scaffold00029 685114 1 G T scaffold16440 Both SNP 0008.scaffold00029 685134 1 A G scaffold16440 Both INDEL 0008.scaffold00029 685191 2 .. GA scaffold16440 ScafM SNP 0008.scaffold00029 685256 1 A C scaffold16440 ReadM SNP 0008.scaffold00029 685306 1 G C - ReadM SNP 0008.scaffold00029 685383 1 C T - ReadM SNP 0008.scaffold00029 685551 1 G A - ReadM SNP 0008.scaffold00029 685640 1 G A - ReadM INDEL 0008.scaffold00029 685693 1 . A - ReadM SNP 0008.scaffold00029 685783 1 C T - ReadM SNP 0008.scaffold00029 685796 1 C A - ReadM SNP 0008.scaffold00029 687447 1 T C - ReadM SNP 0008.scaffold00029 687472 1 A C - ReadM SNP 0008.scaffold00029 687482 1 T C - ReadM SNP 0008.scaffold00029 687607 1 C G - ReadM SNP 0008.scaffold00029 687651 1 T C - ReadM SNP 0008.scaffold00029 687682 1 C T - ReadM SNP 0008.scaffold00029 687697 1 T A - ReadM SNP 0008.scaffold00029 687721 1 G A - ReadM SNP 0008.scaffold00029 687928 1 T A - ReadM SNP 0008.scaffold00029 687957 1 T G - ReadM SNP 0008.scaffold00029 687989 1 G A - ReadM SNP 0008.scaffold00029 688092 1 G T - ScafM INDEL 0008.scaffold00029 688223 4 .... TAAT scaffold5633 Both SNP 0008.scaffold00029 688247 1 A G scaffold5633 Both SNP 0008.scaffold00029 688300 1 T A scaffold5633 ReadM SNP 0008.scaffold00029 688399 1 T C - Both SNP 0008.scaffold00029 688565 1 C T scaffold5633 Both SNP 0008.scaffold00029 688582 1 T A scaffold5633 Both SNP 0008.scaffold00029 688600 1 A C scaffold5633 Both SNP 0008.scaffold00029 688669 1 T G scaffold5633 Both SNP 0008.scaffold00029 688782 1 G T scaffold5633 Both SNP 0008.scaffold00029 688796 1 C T scaffold5633 Both SNP 0008.scaffold00029 688800 1 G T scaffold5633 Both SNP 0008.scaffold00029 688822 2 AA GT scaffold5633 ReadM SNP 0008.scaffold00029 688976 1 C A - ReadM SNP 0008.scaffold00029 688980 1 C T - ReadM SNP 0008.scaffold00029 688985 1 A G - Both SNP 0008.scaffold00029 689024 1 G A scaffold5633 Both INDEL 0008.scaffold00029 689065 1 G . scaffold5633 ScafM SNP 0008.scaffold00029 689069 1 A T scaffold5633 ReadM SNP 0008.scaffold00029 689109 1 C T - ReadM SNP 0008.scaffold00029 689121 1 G T - ReadM SNP 0008.scaffold00029 689154 1 T G - Both SNP 0008.scaffold00029 689343 1 T A scaffold5633 Both SNP 0008.scaffold00029 689471 1 T C scaffold5633 ReadM SNP 0008.scaffold00029 689700 1 C T - ReadM SNP 0008.scaffold00029 689720 1 C T - ReadM SNP 0008.scaffold00029 689731 1 G A - Both SNP 0008.scaffold00029 689919 1 A T scaffold5633 Both SNP 0008.scaffold00029 689926 1 A C scaffold5633 Both SNP 0008.scaffold00029 689959 1 G A scaffold5633 Both SNP 0008.scaffold00029 689995 1 T C scaffold5633 ReadM SNP 0008.scaffold00029 690007 1 C T - ReadM SNP 0008.scaffold00029 690257 1 C T - ReadM SNP 0008.scaffold00029 690336 1 G C - ReadM SNP 0008.scaffold00029 690401 1 T C - ReadM SNP 0008.scaffold00029 690428 1 T C - ReadM SNP 0008.scaffold00029 690443 1 G T - ReadM SNP 0008.scaffold00029 690594 1 T A - ReadM SNP 0008.scaffold00029 690703 1 G A - ReadM SNP 0008.scaffold00029 690747 1 G A - ReadM SNP 0008.scaffold00029 690788 1 C G - ReadM SNP 0008.scaffold00029 690826 1 T C - ReadM SNP 0008.scaffold00029 690862 1 C T - ReadM SNP 0008.scaffold00029 690882 1 A G - ReadM SNP 0008.scaffold00029 690955 1 C G - ReadM SNP 0008.scaffold00029 690960 1 G A - ReadM SNP 0008.scaffold00029 690983 1 G A - ReadM SNP 0008.scaffold00029 691054 1 C A - ReadM SNP 0008.scaffold00029 691060 1 A G - ReadM SNP 0008.scaffold00029 691068 1 G A - ReadM SNP 0008.scaffold00029 691121 1 C A - ReadM SNP 0008.scaffold00029 691160 1 G T - ReadM SNP 0008.scaffold00029 691164 1 A G - ReadM SNP 0008.scaffold00029 691258 1 A G - ReadM SNP 0008.scaffold00029 691267 1 C T - ReadM SNP 0008.scaffold00029 691288 1 G A - ReadM SNP 0008.scaffold00029 691347 1 G A - ReadM SNP 0008.scaffold00029 691414 1 C T - ReadM SNP 0008.scaffold00029 691440 1 G T - ReadM INDEL 0008.scaffold00029 691549 1 A . - ReadM SNP 0008.scaffold00029 691678 1 G A - ReadM SNP 0008.scaffold00029 691711 1 A G - ReadM SNP 0008.scaffold00029 691753 1 T C - ReadM SNP 0008.scaffold00029 691756 1 G A - ReadM SNP 0008.scaffold00029 691762 1 C A - ReadM SNP 0008.scaffold00029 691880 1 G A - ReadM SNP 0008.scaffold00029 691956 1 T C - ReadM SNP 0008.scaffold00029 692000 1 G T - ReadM SNP 0008.scaffold00029 692027 1 T A - ReadM SNP 0008.scaffold00029 692062 1 T A - ReadM SNP 0008.scaffold00029 692084 1 T C - ReadM SNP 0008.scaffold00029 692087 1 G T - Both SNP 0008.scaffold00029 692243 1 C T scaffold5633 Both SNP 0008.scaffold00029 692367 1 G A scaffold5633 Both SNP 0008.scaffold00029 692392 1 C T scaffold5633 Both SNP 0008.scaffold00029 692666 1 C A scaffold5633 ReadM SNP 0008.scaffold00029 692787 1 C T - ReadM SNP 0008.scaffold00029 692843 1 T C - ScafM SNP 0008.scaffold00029 692938 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 693062 3 ... ATA scaffold5633 ScafM SNP 0008.scaffold00029 693114 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 693135 4 TTGT .... scaffold5633 ScafM SNP 0008.scaffold00029 693276 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 694617 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 694773 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 694780 1 C T scaffold5633 Both SNP 0008.scaffold00029 694855 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 695202 2 CT TA scaffold5633 ScafM SNP 0008.scaffold00029 695226 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 695260 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 695270 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 695284 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 695321 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 695334 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 695342 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 695367 1 G T scaffold5633 ScafM INDEL 0008.scaffold00029 695773 1 . G scaffold5633 ScafM SNP 0008.scaffold00029 695777 2 AG CC scaffold5633 ScafM SNP 0008.scaffold00029 695789 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 695799 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 695842 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 695897 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 695912 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 695964 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 695974 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 696054 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 696071 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 696108 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 696110 1 C T scaffold5633 Both INDEL 0008.scaffold00029 696208 2 .. CT scaffold5633 ScafM INDEL 0008.scaffold00029 696305 2 GT .. scaffold5633 ScafM INDEL 0008.scaffold00029 696308 4 TAGG .... scaffold5633 ScafM SNP 0008.scaffold00029 696319 2 AT GG scaffold5633 ScafM INDEL 0008.scaffold00029 696344 7 ACTACGT ....... scaffold5633 ScafM SNP 0008.scaffold00029 696359 1 G C scaffold5633 ScafM INDEL 0008.scaffold00029 696377 1 G . scaffold5633 ReadM SNP 0008.scaffold00029 696432 1 C T - ReadM SNP 0008.scaffold00029 696452 1 A T - ReadM SNP 0008.scaffold00029 696511 1 C T - ReadM SNP 0008.scaffold00029 696607 1 G A - ReadM SNP 0008.scaffold00029 696646 1 G A - ScafM INDEL 0008.scaffold00029 696817 2 GA .. scaffold5633 ScafM SNP 0008.scaffold00029 696829 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 696844 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 696847 1 T A scaffold5633 Both SNP 0008.scaffold00029 696875 1 G A scaffold5633 Both SNP 0008.scaffold00029 696911 1 T C scaffold5633 Both SNP 0008.scaffold00029 697177 1 T G scaffold5633 ScafM INDEL 0008.scaffold00029 697292 5 TTTTT ..... scaffold5633 Both SNP 0008.scaffold00029 697375 1 A G scaffold5633 Both SNP 0008.scaffold00029 697473 1 T C scaffold5633 Both SNP 0008.scaffold00029 697529 1 A G scaffold5633 Both SNP 0008.scaffold00029 697561 1 C T scaffold5633 Both INDEL 0008.scaffold00029 697598 1 C . scaffold5633 Both SNP 0008.scaffold00029 697644 1 A G scaffold5633 Both SNP 0008.scaffold00029 697696 1 G C scaffold5633 ScafM INDEL 0008.scaffold00029 697731 3 TTT ... scaffold5633 ScafM SNP 0008.scaffold00029 697801 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 697817 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 697820 1 A G scaffold5633 Both SNP 0008.scaffold00029 697836 1 C T scaffold5633 Both SNP 0008.scaffold00029 697871 1 A T scaffold5633 Both SNP 0008.scaffold00029 697898 1 T A scaffold5633 Both SNP 0008.scaffold00029 697992 1 A G scaffold5633 Both SNP 0008.scaffold00029 698040 1 A T scaffold5633 Both SNP 0008.scaffold00029 698186 1 G A scaffold5633 Both SNP 0008.scaffold00029 698260 1 T G scaffold5633 Both INDEL 0008.scaffold00029 698280 1 T . scaffold5633 Both SNP 0008.scaffold00029 698283 1 T A scaffold5633 Both SNP 0008.scaffold00029 698674 1 C G scaffold5633 Both SNP 0008.scaffold00029 698752 1 G A scaffold5633 Both SNP 0008.scaffold00029 698957 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 699006 1 G T scaffold5633 ScafM INDEL 0008.scaffold00029 699015 2 .. TT scaffold5633 Both SNP 0008.scaffold00029 699345 1 G T scaffold5633 Both SNP 0008.scaffold00029 699394 1 G T scaffold5633 ScafM INDEL 0008.scaffold00029 699400 2 .. TG scaffold5633 Both SNP 0008.scaffold00029 699456 1 A C scaffold5633 Both SNP 0008.scaffold00029 699467 1 T A scaffold5633 Both SNP 0008.scaffold00029 699494 1 G A scaffold5633 Both SNP 0008.scaffold00029 699518 1 T A scaffold5633 ScafM INDEL 0008.scaffold00029 699580 1 A . scaffold5633 ScafM INDEL 0008.scaffold00029 699582 4 ACAA .... scaffold5633 Both SNP 0008.scaffold00029 699638 1 G A scaffold5633 Both SNP 0008.scaffold00029 699801 1 A T scaffold5633 Both SNP 0008.scaffold00029 699823 1 T C scaffold5633 Both SNP 0008.scaffold00029 699834 1 T C scaffold5633 Both SNP 0008.scaffold00029 699867 1 A G scaffold5633 Both SNP 0008.scaffold00029 699947 1 T C scaffold5633 Both SNP 0008.scaffold00029 699958 1 A C scaffold5633 Both SNP 0008.scaffold00029 700013 1 C T scaffold5633 Both SNP 0008.scaffold00029 700038 1 A G scaffold5633 ReadM SNP 0008.scaffold00029 700062 1 C G - ScafM SNP 0008.scaffold00029 700195 1 T C scaffold5633 Both SNP 0008.scaffold00029 700240 1 T G scaffold5633 Both INDEL 0008.scaffold00029 700244 1 C . scaffold5633 ScafM SNP 0008.scaffold00029 700253 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 700306 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 700308 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 700310 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 700312 1 G A scaffold5633 Both SNP 0008.scaffold00029 700510 1 A G scaffold5633 Both SNP 0008.scaffold00029 700560 1 G A scaffold5633 Both SNP 0008.scaffold00029 700593 1 C G scaffold5633 Both SNP 0008.scaffold00029 700733 1 G A scaffold5633 Both SNP 0008.scaffold00029 700808 1 T C scaffold5633 Both SNP 0008.scaffold00029 700868 1 T C scaffold5633 Both SNP 0008.scaffold00029 700882 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 700889 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 700917 1 T A scaffold5633 Both SNP 0008.scaffold00029 700937 1 A T scaffold5633 Both SNP 0008.scaffold00029 700973 1 A C scaffold5633 Both SNP 0008.scaffold00029 700983 1 T G scaffold5633 Both SNP 0008.scaffold00029 701047 1 G A scaffold5633 Both SNP 0008.scaffold00029 701261 1 A T scaffold5633 ScafM INDEL 0008.scaffold00029 701316 7 TCTTCTA ....... scaffold5633 ScafM INDEL 0008.scaffold00029 701325 1 A . scaffold5633 ScafM SNP 0008.scaffold00029 701345 1 A C scaffold5633 Both INDEL 0008.scaffold00029 701378 1 . C scaffold5633 Both SNP 0008.scaffold00029 701401 1 T C scaffold5633 Both SNP 0008.scaffold00029 701430 1 C A scaffold5633 Both SNP 0008.scaffold00029 701502 1 C T scaffold5633 Both INDEL 0008.scaffold00029 701544 1 . G scaffold5633 Both SNP 0008.scaffold00029 701572 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 701604 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 701608 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 701619 1 T C scaffold5633 ReadM SNP 0008.scaffold00029 701687 1 T C - ReadM INDEL 0008.scaffold00029 701703 2 AT .. - Both SNP 0008.scaffold00029 701914 1 A T scaffold5633 Both SNP 0008.scaffold00029 702043 1 G A scaffold5633 Both SNP 0008.scaffold00029 702047 1 A T scaffold5633 Both INDEL 0008.scaffold00029 702078 1 C . scaffold5633 Both SNP 0008.scaffold00029 702183 1 T C scaffold5633 Both INDEL 0008.scaffold00029 702189 1 G . scaffold5633 ScafM SNP 0008.scaffold00029 702191 1 T A scaffold5633 Both SNP 0008.scaffold00029 702227 1 C T scaffold5633 Both SNP 0008.scaffold00029 702256 1 T C scaffold5633 Both SNP 0008.scaffold00029 702276 1 G A scaffold5633 Both SNP 0008.scaffold00029 702338 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 702353 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 702360 2 TG AC scaffold5633 Both SNP 0008.scaffold00029 702434 1 C G scaffold5633 ScafM INDEL 0008.scaffold00029 702513 4 .... TAGC scaffold5633 Both SNP 0008.scaffold00029 702555 1 C T scaffold5633 Both SNP 0008.scaffold00029 702557 1 C A scaffold5633 ScafM INDEL 0008.scaffold00029 702716 40 ........................................ TCTCCCTTGAGAGAAGGGTGTCCTAACTTCCTCTATGTAC scaffold5633 ScafM INDEL 0008.scaffold00029 702718 17 ................. AAAAAAAAAAAAAAAAA scaffold5633 ScafM SNP 0008.scaffold00029 702781 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 702817 8 ........ CAGTTCCT scaffold5633 ScafM SNP 0008.scaffold00029 702848 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 702882 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 702914 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 703218 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 703236 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 703269 1 C A scaffold5633 ScafM SNP 0008.scaffold00029 703322 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 703338 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 703376 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 703432 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 703475 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 703494 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 703522 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 703528 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 703584 1 G C scaffold5633 ScafM SNP 0008.scaffold00029 703603 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 703646 1 G T scaffold5633 ScafM INDEL 0008.scaffold00029 703657 8 TTGTAGAC ........ scaffold5633 ScafM SNP 0008.scaffold00029 703691 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 703707 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 703722 1 G C scaffold5633 ScafM SNP 0008.scaffold00029 703758 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 703784 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 703807 1 T G scaffold5633 ReadM SNP 0008.scaffold00029 704334 1 T A - ReadM SNP 0008.scaffold00029 705422 1 C G - ReadM SNP 0008.scaffold00029 705565 1 G A - ReadM SNP 0008.scaffold00029 705569 1 A T - ReadM SNP 0008.scaffold00029 705611 1 T A - ReadM SNP 0008.scaffold00029 705756 1 C A - ReadM INDEL 0008.scaffold00029 705864 2 AA .. - ReadM SNP 0008.scaffold00029 705968 1 T A - ReadM SNP 0008.scaffold00029 706033 1 C G - ReadM SNP 0008.scaffold00029 706083 1 C T - ReadM SNP 0008.scaffold00029 706087 1 C T - ReadM SNP 0008.scaffold00029 706183 1 G A - ReadM SNP 0008.scaffold00029 706210 1 A G - ReadM SNP 0008.scaffold00029 706219 1 T A - Both SNP 0008.scaffold00029 706254 1 C T scaffold5633 Both SNP 0008.scaffold00029 706330 1 G T scaffold5633 Both SNP 0008.scaffold00029 706377 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 706404 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 706424 2 AG TA scaffold5633 ScafM SNP 0008.scaffold00029 706437 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 706439 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 706443 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 706451 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 706459 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 706497 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 706500 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 706512 7 GGGGGGG ....ATC scaffold5633 ScafM SNP 0008.scaffold00029 706523 1 G C scaffold5633 ScafM SNP 0008.scaffold00029 706548 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 706561 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 706572 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 706613 2 TC .. scaffold5633 ScafM SNP 0008.scaffold00029 706639 2 TA AT scaffold5633 ScafM SNP 0008.scaffold00029 706686 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 706694 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 706740 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 708286 1 . T scaffold15922 ScafM SNP 0008.scaffold00029 708977 1 G A scaffold15922 ScafM SNP 0008.scaffold00029 711663 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 711710 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 711740 1 G C scaffold5633 ScafM INDEL 0008.scaffold00029 711750 6 ...... CCACTG scaffold5633 ScafM INDEL 0008.scaffold00029 711825 8 ACTATAGT ........ scaffold5633 ScafM SNP 0008.scaffold00029 711888 1 T G scaffold5633 ScafM INDEL 0008.scaffold00029 712087 2 CT .. scaffold5633 ScafM SNP 0008.scaffold00029 712097 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 712108 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 712117 1 . T scaffold5633 Both INDEL 0008.scaffold00029 712165 1 . A scaffold5633 Both SNP 0008.scaffold00029 712204 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 712240 1 T A scaffold5633 ScafM INDEL 0008.scaffold00029 712258 4 .... ACAT scaffold5633 ScafM SNP 0008.scaffold00029 712271 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 712295 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 712298 1 A G scaffold5633 Both SNP 0008.scaffold00029 712353 1 A C scaffold5633 Both INDEL 0008.scaffold00029 712412 1 A . scaffold5633 Both SNP 0008.scaffold00029 712507 1 A G scaffold5633 Both SNP 0008.scaffold00029 712511 1 C G scaffold5633 Both SNP 0008.scaffold00029 712517 1 T C scaffold5633 Both SNP 0008.scaffold00029 712582 1 A G scaffold5633 Both SNP 0008.scaffold00029 712600 1 T C scaffold5633 Both SNP 0008.scaffold00029 712752 1 G A scaffold5633 ReadM SNP 0008.scaffold00029 712971 1 G T - ReadM INDEL 0008.scaffold00029 712983 2 AC .. - Both SNP 0008.scaffold00029 713056 1 A G scaffold5633 Both SNP 0008.scaffold00029 713072 1 T C scaffold5633 Both SNP 0008.scaffold00029 713077 1 T A scaffold5633 Both SNP 0008.scaffold00029 713188 1 T G scaffold5633 Both SNP 0008.scaffold00029 713242 1 C A scaffold5633 Both SNP 0008.scaffold00029 713248 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 713270 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 713309 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 713331 3 CAT TGC scaffold5633 ScafM SNP 0008.scaffold00029 713358 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 713411 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 713454 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 713474 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 713484 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 713531 1 G T scaffold5633 ScafM INDEL 0008.scaffold00029 713661 3 ... TGA scaffold5633 Both SNP 0008.scaffold00029 713710 1 C A scaffold5633 Both SNP 0008.scaffold00029 713771 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 713816 3 ..G ATA scaffold5633 ScafM SNP 0008.scaffold00029 713823 1 A T scaffold5633 ScafM INDEL 0008.scaffold00029 713831 7 TTCATAA ....... scaffold5633 ScafM SNP 0008.scaffold00029 713848 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 713898 1 C T scaffold5633 ScafM INDEL 0008.scaffold00029 713958 1 T . scaffold5633 ScafM SNP 0008.scaffold00029 713972 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 713981 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 713983 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 714027 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714030 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 714041 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714053 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714064 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714070 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714075 1 C A scaffold5633 ScafM SNP 0008.scaffold00029 714078 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 714080 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714089 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714102 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714105 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714116 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714136 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 714142 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714147 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714163 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714168 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714347 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 714356 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 714366 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714374 1 C T scaffold5633 ScafM INDEL 0008.scaffold00029 714378 1 T . scaffold5633 ScafM INDEL 0008.scaffold00029 714386 3 CTA ... scaffold5633 ScafM INDEL 0008.scaffold00029 714408 1 C . scaffold5633 ScafM SNP 0008.scaffold00029 714416 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714421 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714427 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714454 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714464 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 714469 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714479 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714490 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 714527 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 714531 1 T . scaffold5633 ScafM SNP 0008.scaffold00029 714543 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714558 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 714560 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 714580 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 714585 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 714587 1 C A scaffold5633 ScafM SNP 0008.scaffold00029 714612 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 714622 6 ...... GTTTTT scaffold5633 ScafM SNP 0008.scaffold00029 714635 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714657 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 714660 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 714687 1 . A scaffold5633 ScafM SNP 0008.scaffold00029 714689 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 714693 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 714706 1 A T scaffold5633 ScafM INDEL 0008.scaffold00029 714717 15 ............... GATCTAAATAAAAGA scaffold5633 ScafM SNP 0008.scaffold00029 714741 1 T A scaffold5633 ScafM INDEL 0008.scaffold00029 714743 2 .. AA scaffold5633 ScafM INDEL 0008.scaffold00029 714768 4 ATTA .... scaffold5633 ScafM INDEL 0008.scaffold00029 714815 1 . T scaffold5633 ScafM INDEL 0008.scaffold00029 714821 1 A . scaffold5633 ScafM SNP 0008.scaffold00029 714861 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 714875 1 A G scaffold5633 ReadM INDEL 0008.scaffold00029 714942 1 G . - ScafM INDEL 0008.scaffold00029 714942 2 GT .A scaffold5633 ScafM SNP 0008.scaffold00029 714993 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 715014 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 715021 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 715034 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 715055 1 A T scaffold5633 ScafM INDEL 0008.scaffold00029 715058 1 G . scaffold5633 ScafM SNP 0008.scaffold00029 715065 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 715093 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 715101 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 715110 2 AG GA scaffold5633 ScafM SNP 0008.scaffold00029 715121 1 A C scaffold5633 ScafM INDEL 0008.scaffold00029 715131 1 G . scaffold5633 ScafM SNP 0008.scaffold00029 715137 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 715147 1 T A scaffold5633 Both SNP 0008.scaffold00029 715500 1 G A scaffold5633 Both SNP 0008.scaffold00029 715516 1 A C scaffold5633 Both SNP 0008.scaffold00029 716089 1 C A scaffold5633 ScafM SNP 0008.scaffold00029 716142 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 716173 1 G C scaffold5633 ScafM INDEL 0008.scaffold00029 716223 2 .. TA scaffold5633 ScafM SNP 0008.scaffold00029 716260 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 716552 2 GG AT scaffold5633 ScafM SNP 0008.scaffold00029 716558 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 716580 2 TT .. scaffold5633 ScafM SNP 0008.scaffold00029 716591 2 GA AG scaffold5633 ScafM SNP 0008.scaffold00029 716996 1 C T scaffold5633 ScafM INDEL 0008.scaffold00029 717038 2 .. GC scaffold5633 ScafM SNP 0008.scaffold00029 717043 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 717049 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 718466 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 718469 1 T . scaffold5633 ScafM INDEL 0008.scaffold00029 718478 1 . C scaffold5633 ScafM INDEL 0008.scaffold00029 718480 2 .. CC scaffold5633 ScafM INDEL 0008.scaffold00029 718481 6 ...... CCAGCC scaffold5633 ScafM SNP 0008.scaffold00029 718515 1 C T scaffold5633 ScafM INDEL 0008.scaffold00029 718586 3 ..G TAA scaffold5633 ScafM SNP 0008.scaffold00029 718645 1 T G scaffold5633 ScafM SNP 0008.scaffold00029 718700 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 718720 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 718733 1 A . scaffold5633 ScafM SNP 0008.scaffold00029 718764 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 718786 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 718789 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 718814 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 718832 1 T A scaffold5633 ScafM INDEL 0008.scaffold00029 718857 3 ... TAA scaffold5633 ScafM INDEL 0008.scaffold00029 718960 1 C . scaffold5633 ScafM SNP 0008.scaffold00029 719671 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 719684 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 719687 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 719696 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 719699 1 G C scaffold5633 ScafM INDEL 0008.scaffold00029 719706 3 ... CGT scaffold5633 Both SNP 0008.scaffold00029 719730 1 G A scaffold5633 Both INDEL 0008.scaffold00029 719788 1 A . scaffold5633 Both SNP 0008.scaffold00029 719809 1 G A scaffold5633 Both SNP 0008.scaffold00029 719817 1 A C scaffold5633 Both SNP 0008.scaffold00029 719886 1 C T scaffold5633 Both SNP 0008.scaffold00029 719900 1 C T scaffold5633 Both SNP 0008.scaffold00029 719940 1 G T scaffold5633 Both SNP 0008.scaffold00029 720020 1 T G scaffold5633 Both SNP 0008.scaffold00029 720190 1 T A scaffold5633 Both SNP 0008.scaffold00029 720205 1 A G scaffold5633 Both SNP 0008.scaffold00029 720210 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 720258 1 T G scaffold5633 Both SNP 0008.scaffold00029 720273 1 T C scaffold5633 Both SNP 0008.scaffold00029 720277 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 720416 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 720568 31 ............................... GAAATATCCCCACACGGATAGTTTTTGTAGC scaffold5633 Both SNP 0008.scaffold00029 720631 1 A G scaffold5633 Both SNP 0008.scaffold00029 720680 1 T C scaffold5633 Both INDEL 0008.scaffold00029 720718 1 T . scaffold5633 Both SNP 0008.scaffold00029 720796 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 720808 1 A C scaffold5633 Both INDEL 0008.scaffold00029 720815 1 G . scaffold5633 Both SNP 0008.scaffold00029 720826 1 A C scaffold5633 Both SNP 0008.scaffold00029 720909 1 C A scaffold5633 Both SNP 0008.scaffold00029 720931 1 A T scaffold5633 Both SNP 0008.scaffold00029 720942 1 T G scaffold5633 Both SNP 0008.scaffold00029 721117 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 721257 10 TTGAGCAGCT .......... scaffold5633 ScafM SNP 0008.scaffold00029 721327 1 A C scaffold5633 ScafM INDEL 0008.scaffold00029 721351 4 .... ATCA scaffold5633 Both SNP 0008.scaffold00029 721429 1 C A scaffold5633 Both SNP 0008.scaffold00029 721449 1 G A scaffold5633 Both SNP 0008.scaffold00029 721502 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 721521 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 721527 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 721553 1 A C scaffold5633 ScafM SNP 0008.scaffold00029 721561 2 CT TC scaffold5633 Both SNP 0008.scaffold00029 721582 1 C A scaffold5633 Both SNP 0008.scaffold00029 721669 1 A T scaffold5633 Both SNP 0008.scaffold00029 721746 1 A C scaffold5633 Both SNP 0008.scaffold00029 721815 1 G A scaffold5633 Both SNP 0008.scaffold00029 721991 1 C G scaffold5633 Both INDEL 0008.scaffold00029 721994 1 . A scaffold5633 Both SNP 0008.scaffold00029 722019 1 A G scaffold5633 Both SNP 0008.scaffold00029 722096 1 C T scaffold5633 Both SNP 0008.scaffold00029 722191 1 T A scaffold5633 Both SNP 0008.scaffold00029 722223 1 G C scaffold5633 Both INDEL 0008.scaffold00029 722257 1 T . scaffold5633 Both SNP 0008.scaffold00029 722332 1 G A scaffold5633 Both SNP 0008.scaffold00029 722373 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 722385 2 TT GC scaffold5633 Both SNP 0008.scaffold00029 722415 1 T A scaffold5633 Both SNP 0008.scaffold00029 722433 1 C T scaffold5633 Both INDEL 0008.scaffold00029 722498 1 . C scaffold5633 Both SNP 0008.scaffold00029 722620 1 T A scaffold5633 Both INDEL 0008.scaffold00029 722633 1 A . scaffold5633 ScafM INDEL 0008.scaffold00029 722659 6 ...... CATATT scaffold5633 Both SNP 0008.scaffold00029 722729 1 A G scaffold5633 Both SNP 0008.scaffold00029 722775 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 722794 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 722800 2 AA GT scaffold5633 ScafM SNP 0008.scaffold00029 722815 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 722846 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 722860 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 722872 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 722884 3 ACT ... scaffold5633 ScafM INDEL 0008.scaffold00029 722888 4 AACA .... scaffold5633 ScafM INDEL 0008.scaffold00029 722895 1 C . scaffold5633 ScafM SNP 0008.scaffold00029 722897 1 T C scaffold5633 Both SNP 0008.scaffold00029 722919 1 G A scaffold5633 Both SNP 0008.scaffold00029 722997 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 723380 3 ... GTA scaffold5633 ScafM INDEL 0008.scaffold00029 723382 4 .... GGCC scaffold5633 ScafM SNP 0008.scaffold00029 723395 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 723418 1 C A scaffold5633 Both SNP 0008.scaffold00029 723463 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 723534 1 G C scaffold5633 ScafM SNP 0008.scaffold00029 723538 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 723542 1 T C scaffold5633 Both SNP 0008.scaffold00029 723642 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 723684 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 723721 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 723729 1 C T scaffold5633 ScafM INDEL 0008.scaffold00029 723732 1 . A scaffold5633 ScafM SNP 0008.scaffold00029 723735 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 723761 11 ........... ATTAACAACAC scaffold5633 ScafM SNP 0008.scaffold00029 723797 1 A G scaffold5633 ScafM SNP 0008.scaffold00029 723846 2 CG TA scaffold5633 ScafM SNP 0008.scaffold00029 723861 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 723889 29 GGGAGGGATGACCGATATATTTGCTCTAT ............................. scaffold5633 ScafM SNP 0008.scaffold00029 723954 1 G C scaffold5633 Both SNP 0008.scaffold00029 723996 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 724005 2 AC GA scaffold5633 ScafM INDEL 0008.scaffold00029 724063 4 .... ATGT scaffold5633 ScafM SNP 0008.scaffold00029 724088 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 724101 1 . A scaffold5633 ScafM SNP 0008.scaffold00029 724454 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 724456 1 G A scaffold5633 ScafM INDEL 0008.scaffold00029 724483 2 AT .. scaffold5633 ScafM SNP 0008.scaffold00029 724493 1 C G scaffold5633 ScafM SNP 0008.scaffold00029 724503 1 G T scaffold5633 ScafM SNP 0008.scaffold00029 724512 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 724528 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 724553 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 724561 1 C T scaffold5633 ScafM SNP 0008.scaffold00029 724568 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 724584 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 724602 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 724616 1 C A scaffold5633 ScafM SNP 0008.scaffold00029 724997 2 GA AG scaffold5633 ScafM SNP 0008.scaffold00029 725042 1 T C scaffold5633 ScafM SNP 0008.scaffold00029 725121 1 A T scaffold5633 ScafM SNP 0008.scaffold00029 725124 1 G A scaffold5633 ScafM SNP 0008.scaffold00029 725170 1 T A scaffold5633 ScafM SNP 0008.scaffold00029 725173 1 T C scaffold5633 Both SNP 0008.scaffold00029 725197 1 C A scaffold5633 Both INDEL 0008.scaffold00029 725217 1 . A scaffold5633 Both SNP 0008.scaffold00029 725273 1 T C scaffold5633 ScafM INDEL 0008.scaffold00029 725280 3 ... AAT scaffold5633 ScafM INDEL 0008.scaffold00029 725324 1 . A scaffold5633 ScafM INDEL 0008.scaffold00029 725325 2 .. CG scaffold5633 ScafM INDEL 0008.scaffold00029 725326 2 .. TT scaffold5633 Both SNP 0008.scaffold00029 725361 1 A G scaffold5633 Both INDEL 0008.scaffold00029 725401 1 . C scaffold5633 Both SNP 0008.scaffold00029 725422 1 A G scaffold5633 Both SNP 0008.scaffold00029 725461 1 A G scaffold5633 ScafM INDEL 0008.scaffold00029 725526 1 . T scaffold5633 ScafM INDEL 0008.scaffold00029 725534 4 .... GCTC scaffold5633 ScafM SNP 0008.scaffold00029 726728 1 G A scaffold558 ScafM SNP 0008.scaffold00029 726791 1 G A scaffold558 ScafM SNP 0008.scaffold00029 726799 1 T A scaffold558 ScafM SNP 0008.scaffold00029 726814 1 T C scaffold558 ScafM SNP 0008.scaffold00029 726818 1 G A scaffold558 ScafM SNP 0008.scaffold00029 726821 1 A C scaffold558 ScafM SNP 0008.scaffold00029 726823 1 T A scaffold558 ScafM SNP 0008.scaffold00029 726831 2 GT AA scaffold558 ScafM SNP 0008.scaffold00029 726860 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 726876 3 CAA ... scaffold558 ScafM INDEL 0008.scaffold00029 726922 3 ... ACA scaffold558 ScafM INDEL 0008.scaffold00029 726936 3 TGT ... scaffold558 ScafM INDEL 0008.scaffold00029 726946 1 A . scaffold558 ScafM SNP 0008.scaffold00029 726963 1 A G scaffold558 ScafM SNP 0008.scaffold00029 726997 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 727026 2 TG .. scaffold558 ScafM SNP 0008.scaffold00029 727035 1 C T scaffold558 ScafM SNP 0008.scaffold00029 727061 1 C T scaffold558 ScafM SNP 0008.scaffold00029 727438 1 T G scaffold558 ScafM SNP 0008.scaffold00029 727498 1 C T scaffold558 ScafM SNP 0008.scaffold00029 727502 1 A G scaffold558 ScafM SNP 0008.scaffold00029 727506 1 G C scaffold558 ScafM SNP 0008.scaffold00029 727523 1 T G scaffold558 ScafM SNP 0008.scaffold00029 727538 1 A G scaffold558 ScafM SNP 0008.scaffold00029 727569 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 727574 1 T . scaffold558 ScafM SNP 0008.scaffold00029 727584 1 A G scaffold558 ScafM SNP 0008.scaffold00029 727586 1 G T scaffold558 ScafM SNP 0008.scaffold00029 727628 1 T C scaffold558 ReadM SNP 0008.scaffold00029 727750 1 C G - ReadM SNP 0008.scaffold00029 727759 1 T A - Both SNP 0008.scaffold00029 727805 1 G T scaffold558 Both SNP 0008.scaffold00029 727817 1 T C scaffold558 Both SNP 0008.scaffold00029 727889 1 C G scaffold558 Both INDEL 0008.scaffold00029 727901 1 . A scaffold558 Both SNP 0008.scaffold00029 727933 1 T G scaffold558 ScafM SNP 0008.scaffold00029 727962 1 T G scaffold558 ScafM SNP 0008.scaffold00029 727979 1 T C scaffold558 ScafM SNP 0008.scaffold00029 727995 1 G A scaffold558 ScafM SNP 0008.scaffold00029 727999 1 A G scaffold558 ScafM SNP 0008.scaffold00029 728004 1 A T scaffold558 ScafM SNP 0008.scaffold00029 728109 1 A C scaffold558 ScafM SNP 0008.scaffold00029 728129 1 A G scaffold558 ScafM SNP 0008.scaffold00029 728140 1 A G scaffold558 ScafM SNP 0008.scaffold00029 728142 1 G C scaffold558 ScafM SNP 0008.scaffold00029 728160 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 728194 5 ATTAA ..... scaffold558 ScafM SNP 0008.scaffold00029 728200 1 T G scaffold558 ScafM SNP 0008.scaffold00029 728223 1 G C scaffold558 ScafM SNP 0008.scaffold00029 728266 2 TT AA scaffold558 ReadM SNP 0008.scaffold00029 728306 1 T A - ReadM SNP 0008.scaffold00029 728331 1 T C - ReadM SNP 0008.scaffold00029 728341 1 T C - ReadM SNP 0008.scaffold00029 728433 1 A G - ScafM SNP 0008.scaffold00029 729132 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729158 1 A G scaffold558 ScafM SNP 0008.scaffold00029 729174 1 C A scaffold558 ScafM SNP 0008.scaffold00029 729181 1 G A scaffold558 ScafM SNP 0008.scaffold00029 729183 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729185 1 G A scaffold558 ScafM SNP 0008.scaffold00029 729209 1 C T scaffold558 ScafM SNP 0008.scaffold00029 729315 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 729323 3 ... TGA scaffold558 ScafM SNP 0008.scaffold00029 729345 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 729365 5 TAATT ..... scaffold558 ScafM SNP 0008.scaffold00029 729437 1 C T scaffold558 ScafM SNP 0008.scaffold00029 729482 1 C G scaffold558 ScafM SNP 0008.scaffold00029 729512 1 G A scaffold558 ScafM SNP 0008.scaffold00029 729518 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 729551 4 .... GCGT scaffold558 ScafM SNP 0008.scaffold00029 729611 1 A T scaffold558 ScafM SNP 0008.scaffold00029 729621 1 A G scaffold558 ScafM SNP 0008.scaffold00029 729624 1 A G scaffold558 ScafM SNP 0008.scaffold00029 729626 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729638 1 C T scaffold558 ScafM SNP 0008.scaffold00029 729684 1 A G scaffold558 ScafM SNP 0008.scaffold00029 729710 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729715 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 729751 1 . C scaffold558 ScafM INDEL 0008.scaffold00029 729783 4 .... ATAC scaffold558 ScafM SNP 0008.scaffold00029 729790 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 729799 1 . A scaffold558 ScafM SNP 0008.scaffold00029 729804 1 C A scaffold558 ScafM SNP 0008.scaffold00029 729808 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729821 1 G A scaffold558 ScafM SNP 0008.scaffold00029 729835 1 G A scaffold558 ScafM SNP 0008.scaffold00029 729841 1 C G scaffold558 ScafM SNP 0008.scaffold00029 729870 1 C A scaffold558 ScafM SNP 0008.scaffold00029 729889 1 C T scaffold558 ScafM SNP 0008.scaffold00029 729901 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 729913 1 . T scaffold558 ScafM INDEL 0008.scaffold00029 729916 1 A . scaffold558 ScafM SNP 0008.scaffold00029 729918 1 C T scaffold558 ScafM SNP 0008.scaffold00029 729932 1 T G scaffold558 ScafM SNP 0008.scaffold00029 729946 1 T G scaffold558 ScafM SNP 0008.scaffold00029 729949 1 T C scaffold558 ScafM SNP 0008.scaffold00029 729961 1 A G scaffold558 ScafM SNP 0008.scaffold00029 730204 1 G A scaffold558 ScafM SNP 0008.scaffold00029 730214 1 C A scaffold558 ScafM SNP 0008.scaffold00029 730226 2 AG CC scaffold558 ScafM SNP 0008.scaffold00029 730241 1 A G scaffold558 ScafM SNP 0008.scaffold00029 730243 1 G A scaffold558 ScafM SNP 0008.scaffold00029 730266 1 A G scaffold558 ScafM SNP 0008.scaffold00029 730282 1 C A scaffold558 ScafM SNP 0008.scaffold00029 730286 1 T G scaffold558 ScafM SNP 0008.scaffold00029 730327 1 A C scaffold558 ScafM SNP 0008.scaffold00029 730335 1 C G scaffold558 ScafM SNP 0008.scaffold00029 730352 1 G A scaffold558 ScafM SNP 0008.scaffold00029 730375 1 T C scaffold558 ScafM SNP 0008.scaffold00029 730377 1 G T scaffold558 ScafM SNP 0008.scaffold00029 730420 1 G A scaffold558 ScafM SNP 0008.scaffold00029 730428 1 C T scaffold558 ScafM SNP 0008.scaffold00029 730455 1 C A scaffold558 ScafM SNP 0008.scaffold00029 731243 1 C A scaffold558 ScafM SNP 0008.scaffold00029 731246 1 C G scaffold558 ScafM SNP 0008.scaffold00029 731269 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 731287 7 AGAAACT ....... scaffold558 ScafM INDEL 0008.scaffold00029 731296 1 T . scaffold558 ScafM SNP 0008.scaffold00029 731303 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731354 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 731366 2 .. AC scaffold558 ScafM INDEL 0008.scaffold00029 731391 1 . A scaffold558 ScafM SNP 0008.scaffold00029 731394 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731408 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731414 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731422 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731459 1 C T scaffold558 ScafM SNP 0008.scaffold00029 731466 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731473 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731526 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731542 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 731548 3 ... AAA scaffold558 ScafM SNP 0008.scaffold00029 731566 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 731572 6 AATAAT ...... scaffold558 ScafM INDEL 0008.scaffold00029 731580 9 AAAAAAAAA ......... scaffold558 ScafM SNP 0008.scaffold00029 731626 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731636 1 G T scaffold558 ScafM SNP 0008.scaffold00029 731683 2 AC GT scaffold558 ScafM SNP 0008.scaffold00029 731691 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731711 1 G A scaffold558 ScafM SNP 0008.scaffold00029 731714 1 C A scaffold558 ScafM SNP 0008.scaffold00029 731726 1 A G scaffold558 ScafM SNP 0008.scaffold00029 731744 1 G A scaffold558 ScafM SNP 0008.scaffold00029 731750 1 G A scaffold558 ScafM SNP 0008.scaffold00029 731755 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 731759 8 ........ GATCTTGT scaffold558 ScafM INDEL 0008.scaffold00029 731844 3 CGG .AA scaffold558 ScafM SNP 0008.scaffold00029 731848 1 T A scaffold558 ScafM SNP 0008.scaffold00029 731850 2 CA AG scaffold558 ScafM SNP 0008.scaffold00029 731883 2 TG CT scaffold558 ScafM SNP 0008.scaffold00029 731893 1 G A scaffold558 ScafM SNP 0008.scaffold00029 731929 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731936 1 T G scaffold558 ScafM SNP 0008.scaffold00029 731948 1 T C scaffold558 ScafM SNP 0008.scaffold00029 731964 1 A G scaffold558 ScafM SNP 0008.scaffold00029 732012 1 G T scaffold558 ScafM SNP 0008.scaffold00029 732027 1 G A scaffold558 ScafM SNP 0008.scaffold00029 732050 1 A G scaffold558 ScafM SNP 0008.scaffold00029 732061 1 G C scaffold558 ScafM INDEL 0008.scaffold00029 732080 16 CAGGAGAAGATAGGTT ................ scaffold558 ScafM INDEL 0008.scaffold00029 732097 2 TT .. scaffold558 ScafM SNP 0008.scaffold00029 732137 1 T G scaffold558 ScafM SNP 0008.scaffold00029 732142 1 C T scaffold558 ScafM SNP 0008.scaffold00029 732146 1 C T scaffold558 ScafM SNP 0008.scaffold00029 732175 1 G C scaffold558 ScafM SNP 0008.scaffold00029 732177 1 G A scaffold558 ScafM SNP 0008.scaffold00029 732185 1 T A scaffold558 ScafM SNP 0008.scaffold00029 732191 1 A G scaffold558 ReadM INDEL 0008.scaffold00029 732733 1 . G - ReadM SNP 0008.scaffold00029 733259 1 G A - ReadM SNP 0008.scaffold00029 733301 1 C A - ReadM INDEL 0008.scaffold00029 733306 1 . G - ScafM SNP 0008.scaffold00029 733429 2 GT TC scaffold558 ScafM SNP 0008.scaffold00029 733432 1 G A scaffold558 ScafM SNP 0008.scaffold00029 733444 1 T A scaffold558 ScafM SNP 0008.scaffold00029 733451 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 733463 2 .. CA scaffold558 ScafM SNP 0008.scaffold00029 733485 1 T C scaffold558 ScafM SNP 0008.scaffold00029 733531 1 A C scaffold558 ScafM SNP 0008.scaffold00029 733547 2 AC GA scaffold558 ScafM SNP 0008.scaffold00029 733552 1 A G scaffold558 ScafM SNP 0008.scaffold00029 733562 1 C A scaffold558 ScafM SNP 0008.scaffold00029 733574 1 C A scaffold558 ScafM SNP 0008.scaffold00029 733588 1 G T scaffold558 ScafM SNP 0008.scaffold00029 733604 1 T G scaffold558 ScafM SNP 0008.scaffold00029 733612 1 A G scaffold558 ScafM SNP 0008.scaffold00029 733616 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 733619 3 CAT ... scaffold558 ScafM SNP 0008.scaffold00029 733623 1 A G scaffold558 ScafM SNP 0008.scaffold00029 733660 1 T C scaffold558 ScafM SNP 0008.scaffold00029 733683 1 A G scaffold558 ScafM SNP 0008.scaffold00029 733696 1 C T scaffold558 ScafM SNP 0008.scaffold00029 733699 1 C T scaffold558 ScafM SNP 0008.scaffold00029 733714 1 T C scaffold558 ScafM SNP 0008.scaffold00029 733736 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 733744 8 ........ TGTAAATG scaffold558 ScafM SNP 0008.scaffold00029 733751 1 G A scaffold558 ReadM SNP 0008.scaffold00029 734252 1 T C - ReadM SNP 0008.scaffold00029 734366 1 A G - ReadM SNP 0008.scaffold00029 734368 1 T C - ReadM SNP 0008.scaffold00029 734385 1 A G - ReadM SNP 0008.scaffold00029 734471 1 G A - ReadM SNP 0008.scaffold00029 734486 1 A G - ReadM SNP 0008.scaffold00029 734535 1 C T - ReadM INDEL 0008.scaffold00029 734581 1 A . - ReadM SNP 0008.scaffold00029 734609 1 C A - ReadM SNP 0008.scaffold00029 734629 1 A C - ReadM SNP 0008.scaffold00029 734761 1 A T - ReadM SNP 0008.scaffold00029 734791 1 A G - Both SNP 0008.scaffold00029 734824 1 A G scaffold558 Both SNP 0008.scaffold00029 734856 1 T G scaffold558 ScafM SNP 0008.scaffold00029 734868 1 T C scaffold558 ScafM SNP 0008.scaffold00029 734875 1 T A scaffold558 ScafM SNP 0008.scaffold00029 734880 1 C T scaffold558 ScafM SNP 0008.scaffold00029 734899 1 G A scaffold558 ScafM SNP 0008.scaffold00029 734909 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 734931 7 ....... GGCCCTA scaffold558 Both SNP 0008.scaffold00029 734975 1 G A scaffold558 Both SNP 0008.scaffold00029 735004 1 C T scaffold558 Both SNP 0008.scaffold00029 735065 1 G A scaffold558 Both SNP 0008.scaffold00029 735076 1 G A scaffold558 Both SNP 0008.scaffold00029 735087 1 T C scaffold558 ScafM SNP 0008.scaffold00029 735126 1 C A scaffold558 ScafM SNP 0008.scaffold00029 735132 1 C T scaffold558 ScafM SNP 0008.scaffold00029 735134 1 A T scaffold558 ReadM INDEL 0008.scaffold00029 735279 1 . T - ReadM SNP 0008.scaffold00029 735282 1 A T - ReadM SNP 0008.scaffold00029 735288 1 C A - ReadM SNP 0008.scaffold00029 735635 1 T G - ReadM SNP 0008.scaffold00029 735763 1 T C - ReadM INDEL 0008.scaffold00029 735765 1 T . - ReadM SNP 0008.scaffold00029 735796 1 C T - ReadM SNP 0008.scaffold00029 735904 1 T C - ReadM SNP 0008.scaffold00029 735936 1 C T - ScafM SNP 0008.scaffold00029 736564 1 G A scaffold558 ScafM SNP 0008.scaffold00029 736578 1 A G scaffold558 ScafM SNP 0008.scaffold00029 736645 1 G A scaffold558 ScafM SNP 0008.scaffold00029 736652 1 C T scaffold558 ScafM SNP 0008.scaffold00029 736660 1 A T scaffold558 ScafM SNP 0008.scaffold00029 736666 1 G A scaffold558 ScafM SNP 0008.scaffold00029 736672 3 CAC TGT scaffold558 ScafM SNP 0008.scaffold00029 736691 1 G C scaffold558 ScafM SNP 0008.scaffold00029 736698 1 C G scaffold558 ScafM SNP 0008.scaffold00029 736718 1 T C scaffold558 ScafM SNP 0008.scaffold00029 736720 1 G A scaffold558 ScafM SNP 0008.scaffold00029 736727 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 736736 3 ... AAG scaffold558 ScafM SNP 0008.scaffold00029 736738 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 736739 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736740 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736742 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736743 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736744 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736745 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736746 2 .T CA scaffold558 ScafM INDEL 0008.scaffold00029 736751 2 .G AA scaffold558 ScafM SNP 0008.scaffold00029 736754 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 736755 2 .C AG scaffold558 ScafM INDEL 0008.scaffold00029 736758 4 .... AAAA scaffold558 ScafM SNP 0008.scaffold00029 736760 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 736762 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 736766 5 ..... AAGAT scaffold558 ScafM SNP 0008.scaffold00029 736770 1 C T scaffold558 ScafM SNP 0008.scaffold00029 736783 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 736788 1 . A scaffold558 ScafM SNP 0008.scaffold00029 736797 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 736807 6 AGATGA ...... scaffold558 ScafM SNP 0008.scaffold00029 736820 2 AT TG scaffold558 ScafM SNP 0008.scaffold00029 736826 1 G A scaffold558 ScafM SNP 0008.scaffold00029 736831 1 T G scaffold558 ScafM SNP 0008.scaffold00029 736847 1 A G scaffold558 ScafM SNP 0008.scaffold00029 736861 1 T G scaffold558 ScafM SNP 0008.scaffold00029 736873 1 C T scaffold558 ScafM SNP 0008.scaffold00029 736881 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 736891 1 A . scaffold558 ScafM SNP 0008.scaffold00029 736893 1 A T scaffold558 ScafM SNP 0008.scaffold00029 736900 2 TC CT scaffold558 ScafM SNP 0008.scaffold00029 736927 1 T C scaffold558 ScafM SNP 0008.scaffold00029 736929 1 A G scaffold558 ScafM SNP 0008.scaffold00029 736935 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 736948 1 A . scaffold558 ScafM SNP 0008.scaffold00029 736956 1 G T scaffold558 ScafM SNP 0008.scaffold00029 736966 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 736976 2 TT .A scaffold558 ScafM SNP 0008.scaffold00029 736987 3 TGG CAA scaffold558 ScafM SNP 0008.scaffold00029 736995 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737002 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737042 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737075 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737093 1 G T scaffold558 ScafM SNP 0008.scaffold00029 737120 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737127 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737131 1 T C scaffold558 ScafM SNP 0008.scaffold00029 737174 1 T C scaffold558 ScafM SNP 0008.scaffold00029 737178 1 C A scaffold558 ScafM SNP 0008.scaffold00029 737186 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 737219 1 . T scaffold558 ScafM SNP 0008.scaffold00029 737233 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737239 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737276 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 737283 1 A . scaffold558 ScafM SNP 0008.scaffold00029 737329 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737355 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737364 1 G T scaffold558 ScafM SNP 0008.scaffold00029 737377 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 737417 2 .A TT scaffold558 ScafM SNP 0008.scaffold00029 737448 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737462 1 T C scaffold558 ScafM SNP 0008.scaffold00029 737479 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737503 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 737527 1 A . scaffold558 ScafM SNP 0008.scaffold00029 737529 1 A T scaffold558 ScafM SNP 0008.scaffold00029 737555 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737566 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737589 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737656 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737666 1 T A scaffold558 ScafM SNP 0008.scaffold00029 737684 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737696 1 A G scaffold558 ScafM SNP 0008.scaffold00029 737747 1 C T scaffold558 ScafM SNP 0008.scaffold00029 737749 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 737768 7 TGCAAAT ....... scaffold558 ScafM INDEL 0008.scaffold00029 737777 1 G . scaffold558 ScafM SNP 0008.scaffold00029 737782 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737802 1 G A scaffold558 ScafM SNP 0008.scaffold00029 737823 1 T A scaffold558 ScafM SNP 0008.scaffold00029 737862 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 737883 1 C . scaffold558 ScafM SNP 0008.scaffold00029 737911 1 G T scaffold558 ScafM SNP 0008.scaffold00029 737919 1 T C scaffold558 ScafM SNP 0008.scaffold00029 737930 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 737945 16 AGTAGAAGGAAGGGAG ................ scaffold558 ScafM SNP 0008.scaffold00029 737984 1 G A scaffold558 ScafM SNP 0008.scaffold00029 738001 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 738005 3 ... TTT scaffold558 ScafM SNP 0008.scaffold00029 738038 2 GT TG scaffold558 ScafM INDEL 0008.scaffold00029 738053 2 .. AA scaffold558 ScafM SNP 0008.scaffold00029 738056 1 G A scaffold558 ScafM SNP 0008.scaffold00029 738059 1 G A scaffold558 ScafM SNP 0008.scaffold00029 738075 1 A G scaffold558 ScafM SNP 0008.scaffold00029 738094 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 738107 2 .. TT scaffold558 ScafM SNP 0008.scaffold00029 738113 1 G A scaffold558 ScafM SNP 0008.scaffold00029 738121 1 C T scaffold558 ScafM SNP 0008.scaffold00029 738123 1 C A scaffold558 ScafM SNP 0008.scaffold00029 738155 1 C G scaffold558 ScafM SNP 0008.scaffold00029 738159 1 A T scaffold558 ScafM SNP 0008.scaffold00029 738190 1 G T scaffold558 ScafM SNP 0008.scaffold00029 738215 1 G C scaffold558 ScafM SNP 0008.scaffold00029 738230 1 A G scaffold558 ScafM SNP 0008.scaffold00029 738236 1 A T scaffold558 ScafM SNP 0008.scaffold00029 738253 2 TC AT scaffold558 ScafM SNP 0008.scaffold00029 738261 1 C G scaffold558 ScafM SNP 0008.scaffold00029 738269 1 A C scaffold558 ScafM SNP 0008.scaffold00029 738278 1 C T scaffold558 ScafM SNP 0008.scaffold00029 738281 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 738327 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 739185 4 CACT .... scaffold558 ScafM INDEL 0008.scaffold00029 739190 4 CACC .... scaffold558 ScafM SNP 0008.scaffold00029 739198 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 739255 1 A . scaffold558 ScafM SNP 0008.scaffold00029 739261 1 C T scaffold558 ScafM SNP 0008.scaffold00029 739274 1 A T scaffold558 ScafM SNP 0008.scaffold00029 740182 1 G A scaffold558 ScafM SNP 0008.scaffold00029 740212 1 G T scaffold558 ScafM SNP 0008.scaffold00029 740220 1 G C scaffold558 ScafM SNP 0008.scaffold00029 740237 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 740286 6 ...... GATTGT scaffold558 ScafM INDEL 0008.scaffold00029 740287 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 740294 18 .................. ACTATTGTAGAGAGAGAA scaffold558 ScafM INDEL 0008.scaffold00029 740297 5 ..... AGTAG scaffold558 ScafM INDEL 0008.scaffold00029 740299 1 . T scaffold558 ScafM INDEL 0008.scaffold00029 740301 2 .. TC scaffold558 ScafM INDEL 0008.scaffold00029 740328 7 ACTTAAG ....... scaffold558 ScafM INDEL 0008.scaffold00029 740354 1 . A scaffold558 ScafM INDEL 0008.scaffold00029 740377 1 A . scaffold558 ScafM SNP 0008.scaffold00029 740379 1 T C scaffold558 ScafM SNP 0008.scaffold00029 740386 1 T C scaffold558 ScafM SNP 0008.scaffold00029 740407 1 T C scaffold558 ScafM SNP 0008.scaffold00029 740418 1 C A scaffold558 ScafM SNP 0008.scaffold00029 740435 1 G A scaffold558 ScafM SNP 0008.scaffold00029 740438 2 CT TC scaffold558 ScafM SNP 0008.scaffold00029 740446 1 T C scaffold558 Both SNP 0008.scaffold00029 740499 1 C A scaffold558 ScafM SNP 0008.scaffold00029 740527 1 A G scaffold558 Both SNP 0008.scaffold00029 740546 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 740568 2 AA .G scaffold558 ScafM SNP 0008.scaffold00029 740577 1 C G scaffold558 ScafM SNP 0008.scaffold00029 740582 1 A C scaffold558 Both SNP 0008.scaffold00029 740795 1 A G scaffold558 Both SNP 0008.scaffold00029 740858 1 A G scaffold558 Both SNP 0008.scaffold00029 740894 1 C T scaffold558 Both SNP 0008.scaffold00029 740897 1 G A scaffold558 Both SNP 0008.scaffold00029 740915 1 A G scaffold558 Both SNP 0008.scaffold00029 740927 1 G A scaffold558 Both INDEL 0008.scaffold00029 741561 2 .. TT scaffold558 Both SNP 0008.scaffold00029 741604 1 T C scaffold558 Both SNP 0008.scaffold00029 741865 1 A C scaffold558 Both SNP 0008.scaffold00029 741913 1 T C scaffold558 Both SNP 0008.scaffold00029 741931 1 C T scaffold558 ReadM SNP 0008.scaffold00029 742199 1 G A - Both SNP 0008.scaffold00029 742413 1 C G scaffold558 Both SNP 0008.scaffold00029 742460 1 C G scaffold558 Both SNP 0008.scaffold00029 742539 1 A G scaffold558 ScafM SNP 0008.scaffold00029 742579 2 TC CT scaffold558 Both SNP 0008.scaffold00029 742604 1 T A scaffold558 ScafM SNP 0008.scaffold00029 742675 2 GC CG scaffold558 Both SNP 0008.scaffold00029 742736 1 C T scaffold558 Both SNP 0008.scaffold00029 742754 1 A G scaffold558 ScafM SNP 0008.scaffold00029 742839 2 GA TG scaffold558 Both SNP 0008.scaffold00029 742892 1 G T scaffold558 Both SNP 0008.scaffold00029 743123 1 A T scaffold558 Both SNP 0008.scaffold00029 743182 1 T A scaffold558 Both SNP 0008.scaffold00029 743222 1 C T scaffold558 ScafM SNP 0008.scaffold00029 743246 1 T A scaffold558 ScafM SNP 0008.scaffold00029 743254 2 AA TG scaffold558 ReadM SNP 0008.scaffold00029 743322 1 A G - ReadM SNP 0008.scaffold00029 743417 1 C G - ReadM SNP 0008.scaffold00029 743582 1 C T - ReadM SNP 0008.scaffold00029 743594 1 A C - Both SNP 0008.scaffold00029 743691 1 T C scaffold558 Both SNP 0008.scaffold00029 743714 1 C T scaffold558 ScafM SNP 0008.scaffold00029 743741 1 C T scaffold558 ScafM SNP 0008.scaffold00029 743752 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 743753 2 .. TT scaffold558 ReadM SNP 0008.scaffold00029 744051 1 T C - ReadM SNP 0008.scaffold00029 744084 1 A C - Both SNP 0008.scaffold00029 744102 1 G T scaffold558 Both SNP 0008.scaffold00029 744147 1 A T scaffold558 ScafM SNP 0008.scaffold00029 744173 1 T C scaffold558 ScafM SNP 0008.scaffold00029 744182 1 T C scaffold558 ScafM SNP 0008.scaffold00029 744187 1 T G scaffold558 Both SNP 0008.scaffold00029 744220 1 C T scaffold558 ReadM SNP 0008.scaffold00029 744269 1 T C - ReadM INDEL 0008.scaffold00029 744333 1 . A - ReadM INDEL 0008.scaffold00029 744449 1 T . - ReadM SNP 0008.scaffold00029 744494 1 C T - ReadM SNP 0008.scaffold00029 744539 1 A G - ReadM SNP 0008.scaffold00029 744572 1 C T - ReadM SNP 0008.scaffold00029 744672 1 C A - ReadM SNP 0008.scaffold00029 744709 1 A C - Both SNP 0008.scaffold00029 744822 1 G A scaffold558 Both SNP 0008.scaffold00029 744929 1 A G scaffold558 Both SNP 0008.scaffold00029 744938 1 C T scaffold558 Both INDEL 0008.scaffold00029 744949 1 A . scaffold558 ScafM SNP 0008.scaffold00029 745186 1 G A scaffold558 ReadM SNP 0008.scaffold00029 745300 1 G A - ReadM SNP 0008.scaffold00029 745324 1 A G - ReadM SNP 0008.scaffold00029 745398 1 T C - ReadM SNP 0008.scaffold00029 745450 1 C G - ReadM INDEL 0008.scaffold00029 745569 1 T . - ReadM SNP 0008.scaffold00029 745592 1 G C - ReadM SNP 0008.scaffold00029 745731 1 T C - Both SNP 0008.scaffold00029 745904 1 C T scaffold558 Both SNP 0008.scaffold00029 745977 1 T G scaffold558 Both SNP 0008.scaffold00029 746035 1 G A scaffold558 Both SNP 0008.scaffold00029 746176 1 T C scaffold558 Both SNP 0008.scaffold00029 746207 1 A C scaffold558 Both SNP 0008.scaffold00029 746241 1 C T scaffold558 Both SNP 0008.scaffold00029 746950 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 747181 1 T . scaffold558 ScafM INDEL 0008.scaffold00029 747185 15 ............... AAAAAAAAAAAAAAA scaffold558 ScafM SNP 0008.scaffold00029 747186 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 747588 2 .. AG scaffold558 ScafM INDEL 0008.scaffold00029 747598 1 . G scaffold558 ScafM SNP 0008.scaffold00029 747653 1 G A scaffold558 ScafM SNP 0008.scaffold00029 747659 1 G A scaffold558 Both SNP 0008.scaffold00029 747683 1 C T scaffold558 Both SNP 0008.scaffold00029 747704 1 C G scaffold558 Both SNP 0008.scaffold00029 747725 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 747775 4 .... AGGG scaffold558 ScafM INDEL 0008.scaffold00029 747867 25 AATGAAGACGCTCATCGCATCGTTA ......................... scaffold558 Both SNP 0008.scaffold00029 748018 1 C T scaffold558 Both SNP 0008.scaffold00029 748127 1 C T scaffold558 Both SNP 0008.scaffold00029 748132 1 T C scaffold558 Both SNP 0008.scaffold00029 748148 1 G A scaffold558 ScafM SNP 0008.scaffold00029 748176 1 A G scaffold558 ScafM SNP 0008.scaffold00029 748422 1 A C scaffold558 ScafM SNP 0008.scaffold00029 748561 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 748572 10 TAAAATTTAG .......... scaffold558 ScafM SNP 0008.scaffold00029 748590 1 T A scaffold558 ScafM SNP 0008.scaffold00029 748603 1 T C scaffold558 ScafM SNP 0008.scaffold00029 748607 1 A C scaffold558 ScafM SNP 0008.scaffold00029 748611 1 A G scaffold558 ScafM SNP 0008.scaffold00029 748621 1 T C scaffold558 ScafM SNP 0008.scaffold00029 748628 1 C T scaffold558 ScafM SNP 0008.scaffold00029 748637 1 G C scaffold558 ScafM INDEL 0008.scaffold00029 748645 1 G . scaffold558 ScafM SNP 0008.scaffold00029 748648 1 A C scaffold558 ScafM SNP 0008.scaffold00029 749312 1 G T scaffold558 Both SNP 0008.scaffold00029 749336 1 A G scaffold558 Both SNP 0008.scaffold00029 749387 1 A G scaffold558 Both SNP 0008.scaffold00029 749427 1 C T scaffold558 Both SNP 0008.scaffold00029 749440 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 749576 6 CCACCT ...... scaffold558 ScafM INDEL 0008.scaffold00029 749645 4 TCTC .... scaffold558 ScafM SNP 0008.scaffold00029 749659 1 G T scaffold558 ReadM SNP 0008.scaffold00029 749742 1 T C - ReadM SNP 0008.scaffold00029 749796 1 T C - ReadM SNP 0008.scaffold00029 749842 1 G A - ReadM SNP 0008.scaffold00029 749893 1 T C - ReadM SNP 0008.scaffold00029 749939 1 G C - ReadM SNP 0008.scaffold00029 749977 1 G A - ReadM INDEL 0008.scaffold00029 749980 1 . A - ReadM SNP 0008.scaffold00029 750028 1 C T - ReadM SNP 0008.scaffold00029 750030 1 A G - Both SNP 0008.scaffold00029 750307 1 G A scaffold558 Both SNP 0008.scaffold00029 750337 1 C T scaffold558 Both SNP 0008.scaffold00029 750454 1 G C scaffold558 ScafM INDEL 0008.scaffold00029 750495 2 .G TA scaffold558 ScafM SNP 0008.scaffold00029 750530 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 750626 1 T . scaffold558 ScafM SNP 0008.scaffold00029 750630 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 750693 22 ...................... GGGCTATGAACTATGAAGTAAC scaffold558 ScafM SNP 0008.scaffold00029 750726 1 G A scaffold558 ScafM SNP 0008.scaffold00029 750849 1 A T scaffold558 ScafM SNP 0008.scaffold00029 750863 1 G T scaffold558 ScafM SNP 0008.scaffold00029 750894 1 T C scaffold558 ScafM SNP 0008.scaffold00029 756715 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 756723 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 756729 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 756740 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 756765 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 756767 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 756802 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 756820 1 G A scaffold7997 ScafM INDEL 0008.scaffold00029 756830 3 TTT ..G scaffold7997 ScafM SNP 0008.scaffold00029 756874 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 756887 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 756905 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 756915 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 756924 2 CA GG scaffold7997 ScafM SNP 0008.scaffold00029 756979 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757001 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 757006 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757025 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757053 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757071 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 757138 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 757188 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 757210 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757216 2 TC AT scaffold7997 ScafM SNP 0008.scaffold00029 757237 1 G T scaffold7997 ScafM SNP 0008.scaffold00029 757271 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 757292 1 C T scaffold7997 ScafM INDEL 0008.scaffold00029 757299 1 C . scaffold7997 ScafM SNP 0008.scaffold00029 757310 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757324 1 G T scaffold7997 ScafM SNP 0008.scaffold00029 757351 2 GT AA scaffold7997 ScafM SNP 0008.scaffold00029 757362 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757394 2 GT AC scaffold7997 ScafM SNP 0008.scaffold00029 757406 1 A C scaffold7997 ScafM SNP 0008.scaffold00029 757416 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757454 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757460 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 757463 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757505 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757530 1 A C scaffold7997 ScafM SNP 0008.scaffold00029 757537 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757553 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757568 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757574 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 757582 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757589 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757594 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 757614 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757620 1 T A scaffold7997 ScafM SNP 0008.scaffold00029 757641 1 T A scaffold7997 ScafM SNP 0008.scaffold00029 757653 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 757660 1 T A scaffold7997 ScafM SNP 0008.scaffold00029 757687 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757693 1 G T scaffold7997 ScafM SNP 0008.scaffold00029 757747 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757761 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757778 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757790 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757795 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757798 1 T A scaffold7997 ScafM SNP 0008.scaffold00029 757800 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757803 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757841 1 A C scaffold7997 ScafM SNP 0008.scaffold00029 757857 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 757872 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757886 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 757888 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 757920 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 757945 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 757952 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758005 1 G A scaffold7997 ScafM SNP 0008.scaffold00029 758020 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758032 3 TGA CAT scaffold7997 ScafM SNP 0008.scaffold00029 758052 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 758066 2 AT GC scaffold7997 ScafM INDEL 0008.scaffold00029 758073 4 ATCG .... scaffold7997 ScafM SNP 0008.scaffold00029 758087 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758148 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 758160 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758188 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758192 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758199 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 758204 2 TT CG scaffold7997 ScafM SNP 0008.scaffold00029 758231 2 TG CA scaffold7997 ScafM SNP 0008.scaffold00029 758249 1 T C scaffold7997 ScafM INDEL 0008.scaffold00029 758263 2 .A GT scaffold7997 ScafM SNP 0008.scaffold00029 758298 1 G T scaffold7997 ScafM INDEL 0008.scaffold00029 758302 1 T . scaffold7997 ScafM SNP 0008.scaffold00029 758350 2 CA GG scaffold7997 ScafM SNP 0008.scaffold00029 758362 1 A T scaffold7997 ScafM SNP 0008.scaffold00029 758367 1 C G scaffold7997 ScafM SNP 0008.scaffold00029 758382 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758398 1 T C scaffold7997 ScafM INDEL 0008.scaffold00029 758404 1 G . scaffold7997 ScafM SNP 0008.scaffold00029 758408 2 TT AC scaffold7997 ScafM INDEL 0008.scaffold00029 758414 4 AGCT .... scaffold7997 ScafM SNP 0008.scaffold00029 758421 1 G T scaffold7997 ScafM SNP 0008.scaffold00029 758456 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758458 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758468 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758480 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758511 1 G A scaffold7997 ScafM INDEL 0008.scaffold00029 758525 2 .T AC scaffold7997 ScafM SNP 0008.scaffold00029 758529 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 758552 1 T C scaffold7997 ScafM SNP 0008.scaffold00029 758562 1 G C scaffold7997 ScafM INDEL 0008.scaffold00029 758626 1 . A scaffold7997 ScafM SNP 0008.scaffold00029 758632 3 TTT AAA scaffold7997 ScafM INDEL 0008.scaffold00029 758637 1 G . scaffold7997 ScafM SNP 0008.scaffold00029 758664 1 A G scaffold7997 ScafM SNP 0008.scaffold00029 758679 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 758695 1 T A scaffold7997 ScafM SNP 0008.scaffold00029 758698 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 758712 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 758720 1 A T scaffold7997 ScafM SNP 0008.scaffold00029 758809 1 T G scaffold7997 ScafM SNP 0008.scaffold00029 758844 2 TG AT scaffold7997 ScafM INDEL 0008.scaffold00029 758862 3 ATT ... scaffold7997 ScafM SNP 0008.scaffold00029 758879 3 TAA CCG scaffold7997 ScafM SNP 0008.scaffold00029 758891 2 GA AC scaffold7997 ScafM SNP 0008.scaffold00029 758895 1 G C scaffold7997 ScafM INDEL 0008.scaffold00029 758906 2 .. TT scaffold7997 ScafM SNP 0008.scaffold00029 758912 1 A T scaffold7997 ScafM SNP 0008.scaffold00029 758920 1 T G scaffold7997 ScafM INDEL 0008.scaffold00029 758930 4 TAAA .... scaffold7997 ScafM SNP 0008.scaffold00029 758952 1 C A scaffold7997 ScafM SNP 0008.scaffold00029 758960 1 C T scaffold7997 ScafM SNP 0008.scaffold00029 759014 1 G C scaffold4616 ScafM INDEL 0008.scaffold00029 759022 2 .. TC scaffold4616 ScafM SNP 0008.scaffold00029 759039 1 C T scaffold4616 ScafM INDEL 0008.scaffold00029 759063 15 ............... TAATTATCTACATTG scaffold4616 ScafM INDEL 0008.scaffold00029 759064 3 ... CTT scaffold4616 ScafM SNP 0008.scaffold00029 759086 1 T A scaffold4616 ScafM SNP 0008.scaffold00029 759107 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759124 1 A T scaffold4616 ScafM SNP 0008.scaffold00029 759126 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759129 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759156 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759158 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759198 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759214 1 T A scaffold4616 ScafM SNP 0008.scaffold00029 759222 1 A G scaffold4616 ScafM INDEL 0008.scaffold00029 759225 2 TG .. scaffold4616 ScafM INDEL 0008.scaffold00029 759228 2 TA .. scaffold4616 ScafM SNP 0008.scaffold00029 759267 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759272 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 759290 1 A C scaffold4616 ScafM SNP 0008.scaffold00029 759300 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759303 1 G C scaffold4616 ScafM INDEL 0008.scaffold00029 759314 1 . A scaffold4616 ScafM SNP 0008.scaffold00029 759330 1 T G scaffold4616 ScafM SNP 0008.scaffold00029 759374 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759399 1 A T scaffold4616 ScafM INDEL 0008.scaffold00029 759444 2 AA .. scaffold4616 ScafM SNP 0008.scaffold00029 759449 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759454 1 C T scaffold4616 ScafM INDEL 0008.scaffold00029 759462 2 .A TT scaffold4616 ScafM SNP 0008.scaffold00029 759476 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759480 1 C T scaffold4616 ScafM INDEL 0008.scaffold00029 759489 4 TTGA .... scaffold4616 ScafM SNP 0008.scaffold00029 759540 2 GG AT scaffold4616 ScafM SNP 0008.scaffold00029 759554 1 C G scaffold4616 ScafM SNP 0008.scaffold00029 759562 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 759570 1 A G scaffold4616 ScafM INDEL 0008.scaffold00029 759634 1 A . scaffold4616 ScafM INDEL 0008.scaffold00029 759648 3 GGA ... scaffold4616 ScafM INDEL 0008.scaffold00029 759652 2 GG .. scaffold4616 ScafM SNP 0008.scaffold00029 759675 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 759705 1 T G scaffold4616 ScafM SNP 0008.scaffold00029 759755 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 759766 1 T C scaffold4616 ScafM INDEL 0008.scaffold00029 759823 22 TTATCCGTTAGTAGATATAATA ...................... scaffold4616 ScafM SNP 0008.scaffold00029 759911 1 C A scaffold4616 ScafM SNP 0008.scaffold00029 759914 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 759942 1 C A scaffold4616 ScafM SNP 0008.scaffold00029 759968 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 759971 1 T C scaffold4616 ScafM INDEL 0008.scaffold00029 759974 1 A . scaffold4616 ScafM INDEL 0008.scaffold00029 759977 1 A . scaffold4616 ScafM SNP 0008.scaffold00029 760014 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 760020 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 760048 1 C T scaffold4616 ScafM INDEL 0008.scaffold00029 760057 2 .. TT scaffold4616 ScafM SNP 0008.scaffold00029 760066 2 TA CT scaffold4616 ScafM SNP 0008.scaffold00029 760072 1 C T scaffold4616 ScafM SNP 0008.scaffold00029 760085 1 T A scaffold4616 ScafM SNP 0008.scaffold00029 760090 1 G C scaffold4616 ScafM SNP 0008.scaffold00029 760103 1 A C scaffold4616 ScafM SNP 0008.scaffold00029 760109 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 760112 1 G T scaffold4616 ScafM SNP 0008.scaffold00029 760115 1 G C scaffold4616 ScafM SNP 0008.scaffold00029 760130 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 760135 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 760175 2 CG AC scaffold4616 ScafM INDEL 0008.scaffold00029 760181 1 . T scaffold4616 ScafM SNP 0008.scaffold00029 760186 1 C A scaffold4616 ScafM INDEL 0008.scaffold00029 760194 4 .... CACG scaffold4616 ScafM SNP 0008.scaffold00029 760205 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 760210 1 A G scaffold4616 ScafM INDEL 0008.scaffold00029 760214 1 . A scaffold4616 ScafM SNP 0008.scaffold00029 760218 1 G T scaffold4616 ScafM SNP 0008.scaffold00029 760220 1 C A scaffold4616 ScafM SNP 0008.scaffold00029 760236 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 760242 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 760244 2 GT TC scaffold4616 ScafM SNP 0008.scaffold00029 760247 1 G A scaffold4616 ScafM SNP 0008.scaffold00029 760259 1 A G scaffold4616 ScafM SNP 0008.scaffold00029 760266 2 TC CT scaffold4616 ScafM SNP 0008.scaffold00029 760278 1 G T scaffold4616 ScafM SNP 0008.scaffold00029 760287 2 TG CA scaffold4616 ScafM SNP 0008.scaffold00029 760290 1 T A scaffold4616 ScafM SNP 0008.scaffold00029 760308 2 GT AC scaffold4616 ScafM INDEL 0008.scaffold00029 760312 3 ... CCC scaffold4616 ScafM SNP 0008.scaffold00029 760319 1 T C scaffold4616 ScafM SNP 0008.scaffold00029 760324 1 C A scaffold4616 ScafM SNP 0008.scaffold00029 760347 1 G C scaffold4616 ScafM SNP 0008.scaffold00029 760735 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 760736 2 .. TA scaffold558 ScafM SNP 0008.scaffold00029 760774 1 C T scaffold558 ScafM SNP 0008.scaffold00029 760776 1 A C scaffold558 ScafM SNP 0008.scaffold00029 760786 1 A G scaffold558 ScafM SNP 0008.scaffold00029 760788 1 T C scaffold558 ScafM SNP 0008.scaffold00029 761498 3 AAG TGA scaffold558 ScafM SNP 0008.scaffold00029 761551 1 T G scaffold558 ScafM SNP 0008.scaffold00029 761553 1 G C scaffold558 ScafM SNP 0008.scaffold00029 761583 2 CG GA scaffold558 ScafM INDEL 0008.scaffold00029 761619 3 ATC ... scaffold558 ScafM SNP 0008.scaffold00029 762014 1 C T scaffold558 ScafM SNP 0008.scaffold00029 762035 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762050 1 A C scaffold558 ScafM SNP 0008.scaffold00029 762081 1 G T scaffold558 ScafM SNP 0008.scaffold00029 762090 1 C T scaffold558 ScafM SNP 0008.scaffold00029 762097 1 G A scaffold558 ScafM SNP 0008.scaffold00029 762116 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 762125 3 ... AGT scaffold558 ScafM INDEL 0008.scaffold00029 762127 1 . C scaffold558 ScafM INDEL 0008.scaffold00029 762129 8 ........ CTCCAATT scaffold558 ScafM SNP 0008.scaffold00029 762178 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762221 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762224 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762240 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762262 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 762266 3 TTA ..G scaffold558 ScafM SNP 0008.scaffold00029 762281 2 TA AG scaffold558 ScafM SNP 0008.scaffold00029 762803 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762806 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762817 1 C G scaffold558 ScafM SNP 0008.scaffold00029 762824 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762829 1 G T scaffold558 ScafM SNP 0008.scaffold00029 762834 1 T C scaffold558 ScafM SNP 0008.scaffold00029 762842 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762869 1 A C scaffold558 ScafM SNP 0008.scaffold00029 762877 1 C T scaffold558 ScafM SNP 0008.scaffold00029 762886 1 A T scaffold558 ScafM SNP 0008.scaffold00029 762888 1 G A scaffold558 ScafM SNP 0008.scaffold00029 762895 1 G A scaffold558 ScafM SNP 0008.scaffold00029 762902 1 G A scaffold558 ScafM SNP 0008.scaffold00029 762920 1 C T scaffold558 ScafM SNP 0008.scaffold00029 762928 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 762930 2 TA .C scaffold558 ScafM SNP 0008.scaffold00029 762934 1 A T scaffold558 ScafM SNP 0008.scaffold00029 762947 1 G A scaffold558 ScafM SNP 0008.scaffold00029 762973 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762977 1 G C scaffold558 ScafM SNP 0008.scaffold00029 762979 2 GT AG scaffold558 ScafM SNP 0008.scaffold00029 762992 1 A G scaffold558 ScafM SNP 0008.scaffold00029 762996 1 C A scaffold558 ScafM SNP 0008.scaffold00029 763000 1 G A scaffold558 ScafM SNP 0008.scaffold00029 763005 1 A G scaffold558 ScafM SNP 0008.scaffold00029 763015 1 C G scaffold558 ScafM SNP 0008.scaffold00029 763019 1 G A scaffold558 ScafM SNP 0008.scaffold00029 763023 1 A G scaffold558 ScafM SNP 0008.scaffold00029 763622 1 A T scaffold558 ScafM SNP 0008.scaffold00029 763653 1 T G scaffold558 ScafM SNP 0008.scaffold00029 763661 1 C T scaffold558 ScafM SNP 0008.scaffold00029 763692 1 G A scaffold558 ScafM SNP 0008.scaffold00029 763706 1 T C scaffold558 ScafM SNP 0008.scaffold00029 763733 1 A G scaffold558 ScafM SNP 0008.scaffold00029 763761 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 763781 5 ATTTA ..... scaffold558 ScafM SNP 0008.scaffold00029 763810 1 A G scaffold558 ScafM SNP 0008.scaffold00029 763821 1 G A scaffold558 ScafM SNP 0008.scaffold00029 763837 1 C T scaffold558 ScafM SNP 0008.scaffold00029 763850 1 G T scaffold558 ScafM INDEL 0008.scaffold00029 763854 2 .. TA scaffold558 ScafM SNP 0008.scaffold00029 763870 1 T A scaffold558 ScafM SNP 0008.scaffold00029 763874 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 763905 1 . C scaffold558 ScafM SNP 0008.scaffold00029 763913 1 C G scaffold558 ScafM SNP 0008.scaffold00029 763917 1 A C scaffold558 ScafM SNP 0008.scaffold00029 763925 1 C G scaffold558 ScafM SNP 0008.scaffold00029 763950 1 A G scaffold558 ScafM SNP 0008.scaffold00029 763982 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764100 1 A G scaffold558 ScafM SNP 0008.scaffold00029 764110 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764146 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764153 1 A C scaffold558 ScafM SNP 0008.scaffold00029 764168 1 T A scaffold558 ScafM SNP 0008.scaffold00029 764177 1 T G scaffold558 ScafM SNP 0008.scaffold00029 764184 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764205 1 A T scaffold558 ScafM SNP 0008.scaffold00029 764285 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764339 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764343 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764357 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764359 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764374 1 G T scaffold558 ScafM SNP 0008.scaffold00029 764408 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764437 1 T G scaffold558 ScafM SNP 0008.scaffold00029 764439 1 G T scaffold558 ScafM SNP 0008.scaffold00029 764459 1 G T scaffold558 ScafM SNP 0008.scaffold00029 764461 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764489 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764513 1 C G scaffold558 ScafM SNP 0008.scaffold00029 764517 1 A T scaffold558 ScafM SNP 0008.scaffold00029 764528 1 G T scaffold558 ScafM SNP 0008.scaffold00029 764556 1 A C scaffold558 ScafM SNP 0008.scaffold00029 764565 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764571 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764597 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764604 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764615 1 A T scaffold558 ScafM SNP 0008.scaffold00029 764624 1 A G scaffold558 ScafM SNP 0008.scaffold00029 764639 2 CT TC scaffold558 ScafM SNP 0008.scaffold00029 764665 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 764681 1 . A scaffold558 ScafM INDEL 0008.scaffold00029 764683 1 . C scaffold558 ScafM INDEL 0008.scaffold00029 764689 5 ..... ATTAT scaffold558 ScafM SNP 0008.scaffold00029 764697 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764702 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764704 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764706 1 A T scaffold558 ScafM SNP 0008.scaffold00029 764727 2 TG CT scaffold558 ScafM SNP 0008.scaffold00029 764738 1 A G scaffold558 ScafM SNP 0008.scaffold00029 764754 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 764769 2 .. AA scaffold558 ScafM SNP 0008.scaffold00029 764779 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 764782 1 . T scaffold558 ScafM INDEL 0008.scaffold00029 764795 1 . T scaffold558 ScafM SNP 0008.scaffold00029 764802 1 A C scaffold558 ScafM SNP 0008.scaffold00029 764807 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764821 1 A G scaffold558 ScafM SNP 0008.scaffold00029 764828 1 C A scaffold558 ScafM SNP 0008.scaffold00029 764832 1 G A scaffold558 ScafM SNP 0008.scaffold00029 764843 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764846 1 C A scaffold558 ScafM SNP 0008.scaffold00029 764851 1 G T scaffold558 ScafM SNP 0008.scaffold00029 764867 2 TA GT scaffold558 ScafM SNP 0008.scaffold00029 764887 1 C T scaffold558 ScafM SNP 0008.scaffold00029 764912 1 A C scaffold558 ScafM SNP 0008.scaffold00029 764946 1 T C scaffold558 ScafM SNP 0008.scaffold00029 764955 1 A G scaffold558 ScafM SNP 0008.scaffold00029 764994 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765012 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765026 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765032 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 765043 5 ACAGT ..... scaffold558 ScafM SNP 0008.scaffold00029 765053 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 765065 2 .. AC scaffold558 ScafM INDEL 0008.scaffold00029 765066 1 . A scaffold558 ScafM SNP 0008.scaffold00029 765085 1 A T scaffold558 ScafM SNP 0008.scaffold00029 765113 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 765118 1 . T scaffold558 ScafM INDEL 0008.scaffold00029 765119 1 . C scaffold558 ScafM SNP 0008.scaffold00029 765129 1 G T scaffold558 ScafM SNP 0008.scaffold00029 765137 1 C A scaffold558 ScafM SNP 0008.scaffold00029 765163 1 A C scaffold558 ScafM SNP 0008.scaffold00029 765196 1 C G scaffold558 ScafM SNP 0008.scaffold00029 765215 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765221 1 G T scaffold558 ScafM SNP 0008.scaffold00029 765225 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765232 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765237 1 C G scaffold558 ScafM SNP 0008.scaffold00029 765293 1 C G scaffold558 ScafM SNP 0008.scaffold00029 765302 2 GG AC scaffold558 ScafM SNP 0008.scaffold00029 765308 1 G T scaffold558 ScafM SNP 0008.scaffold00029 765316 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765318 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765339 2 CA TG scaffold558 ScafM SNP 0008.scaffold00029 765358 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765375 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765379 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765396 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765415 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765517 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765534 2 GT AC scaffold558 ScafM SNP 0008.scaffold00029 765557 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765563 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765580 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765592 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765596 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 765624 4 .... ATGT scaffold558 ScafM SNP 0008.scaffold00029 765644 2 GT TC scaffold558 ScafM SNP 0008.scaffold00029 765654 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765672 1 A C scaffold558 ScafM SNP 0008.scaffold00029 765684 2 GC AT scaffold558 ScafM SNP 0008.scaffold00029 765698 1 A T scaffold558 ScafM SNP 0008.scaffold00029 765702 1 A C scaffold558 ScafM SNP 0008.scaffold00029 765708 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 765710 1 G . scaffold558 ScafM SNP 0008.scaffold00029 765735 1 G C scaffold558 ScafM SNP 0008.scaffold00029 765778 1 G T scaffold558 ScafM SNP 0008.scaffold00029 765784 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765800 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 765807 9 AAAAAAAAG ......... scaffold558 ScafM SNP 0008.scaffold00029 765839 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765843 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765856 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 765861 1 . A scaffold558 ScafM SNP 0008.scaffold00029 765867 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765873 1 C A scaffold558 ScafM SNP 0008.scaffold00029 765882 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765886 1 T C scaffold558 ScafM SNP 0008.scaffold00029 765888 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765892 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765899 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765904 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765910 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765919 1 G T scaffold558 ScafM SNP 0008.scaffold00029 765921 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765938 1 T G scaffold558 ScafM SNP 0008.scaffold00029 765950 1 C T scaffold558 ScafM SNP 0008.scaffold00029 765965 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765968 1 A G scaffold558 ScafM SNP 0008.scaffold00029 765970 1 G A scaffold558 ScafM SNP 0008.scaffold00029 765985 1 A G scaffold558 ScafM SNP 0008.scaffold00029 766000 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 766010 1 G . scaffold558 ReadM SNP 0008.scaffold00029 767059 1 T C - ReadM SNP 0008.scaffold00029 767139 1 G T - ReadM SNP 0008.scaffold00029 767193 1 C G - ReadM SNP 0008.scaffold00029 767516 1 G T - ReadM SNP 0008.scaffold00029 767571 1 G C - ReadM SNP 0008.scaffold00029 767585 1 G T - ReadM SNP 0008.scaffold00029 767676 1 A G - ReadM SNP 0008.scaffold00029 767789 1 C A - ReadM SNP 0008.scaffold00029 767826 1 A G - ReadM SNP 0008.scaffold00029 767836 1 A T - ReadM SNP 0008.scaffold00029 768094 1 T C - ReadM SNP 0008.scaffold00029 768141 1 T A - ReadM SNP 0008.scaffold00029 768151 1 A G - ScafM SNP 0008.scaffold00029 777595 1 A C scaffold558 ScafM SNP 0008.scaffold00029 777606 1 A G scaffold558 ScafM SNP 0008.scaffold00029 777626 1 C G scaffold558 ScafM SNP 0008.scaffold00029 777746 1 T A scaffold558 ScafM SNP 0008.scaffold00029 777769 1 T A scaffold558 ScafM SNP 0008.scaffold00029 778225 1 T G scaffold558 ScafM SNP 0008.scaffold00029 778267 1 T A scaffold558 ScafM SNP 0008.scaffold00029 778318 1 G A scaffold558 ReadM SNP 0008.scaffold00029 778439 1 T A - ReadM SNP 0008.scaffold00029 778896 1 T G - ReadM SNP 0008.scaffold00029 778922 1 T C - ReadM SNP 0008.scaffold00029 779167 1 C T - ReadM SNP 0008.scaffold00029 779179 1 A T - ReadM SNP 0008.scaffold00029 779270 1 T C - ReadM SNP 0008.scaffold00029 779399 1 T G - ReadM SNP 0008.scaffold00029 779535 1 G A - ReadM SNP 0008.scaffold00029 779594 1 A G - ReadM SNP 0008.scaffold00029 779823 1 A G - ReadM SNP 0008.scaffold00029 779873 1 A T - ReadM SNP 0008.scaffold00029 779995 1 T C - ReadM INDEL 0008.scaffold00029 780061 1 T . - ReadM SNP 0008.scaffold00029 780087 1 A G - ReadM SNP 0008.scaffold00029 780139 1 T C - ReadM SNP 0008.scaffold00029 780205 1 G T - Both SNP 0008.scaffold00029 780242 1 G T scaffold558 Both INDEL 0008.scaffold00029 780346 1 T . scaffold558 ScafM SNP 0008.scaffold00029 780348 1 A G scaffold558 Both SNP 0008.scaffold00029 780355 1 A G scaffold558 ScafM SNP 0008.scaffold00029 780392 1 C G scaffold558 ScafM SNP 0008.scaffold00029 780400 1 G A scaffold558 ScafM SNP 0008.scaffold00029 780410 1 T C scaffold558 ScafM SNP 0008.scaffold00029 780428 1 A G scaffold558 ScafM SNP 0008.scaffold00029 780464 1 C T scaffold558 ScafM SNP 0008.scaffold00029 780480 1 T C scaffold558 ScafM SNP 0008.scaffold00029 780499 1 C A scaffold558 ScafM SNP 0008.scaffold00029 780509 1 T C scaffold558 ScafM SNP 0008.scaffold00029 780525 1 C T scaffold558 ScafM SNP 0008.scaffold00029 780542 1 G A scaffold558 ScafM SNP 0008.scaffold00029 780550 1 G T scaffold558 ScafM SNP 0008.scaffold00029 780561 1 G T scaffold558 ReadM INDEL 0008.scaffold00029 780585 1 A . - ReadM SNP 0008.scaffold00029 780604 1 G A - ReadM SNP 0008.scaffold00029 780644 1 C T - ReadM SNP 0008.scaffold00029 780696 1 C G - ReadM SNP 0008.scaffold00029 780705 1 C T - ReadM SNP 0008.scaffold00029 780717 1 C A - ReadM INDEL 0008.scaffold00029 780769 1 . T - ReadM INDEL 0008.scaffold00029 781143 1 . A - ReadM SNP 0008.scaffold00029 781191 1 A T - ReadM SNP 0008.scaffold00029 781194 1 T C - ReadM SNP 0008.scaffold00029 781242 1 C A - ReadM SNP 0008.scaffold00029 781274 1 G A - ReadM SNP 0008.scaffold00029 781360 1 C T - ReadM SNP 0008.scaffold00029 781416 1 C T - ReadM SNP 0008.scaffold00029 781424 1 A G - Both SNP 0008.scaffold00029 781614 1 T A scaffold558 Both SNP 0008.scaffold00029 781664 1 T A scaffold558 Both SNP 0008.scaffold00029 781747 1 T C scaffold558 Both SNP 0008.scaffold00029 781786 1 C T scaffold558 Both SNP 0008.scaffold00029 781802 1 A C scaffold558 Both SNP 0008.scaffold00029 781878 1 A G scaffold558 ScafM SNP 0008.scaffold00029 781966 1 T C scaffold558 ScafM SNP 0008.scaffold00029 781968 1 T C scaffold558 ScafM SNP 0008.scaffold00029 781976 1 A T scaffold558 ScafM SNP 0008.scaffold00029 781981 1 C T scaffold558 ScafM SNP 0008.scaffold00029 782002 1 C A scaffold558 ScafM SNP 0008.scaffold00029 782014 1 T C scaffold558 ScafM SNP 0008.scaffold00029 782024 1 C A scaffold558 ScafM SNP 0008.scaffold00029 782058 1 T G scaffold558 ScafM SNP 0008.scaffold00029 782094 1 G A scaffold558 ScafM SNP 0008.scaffold00029 782100 1 A G scaffold558 ScafM SNP 0008.scaffold00029 782108 1 T C scaffold558 ScafM SNP 0008.scaffold00029 782116 1 T C scaffold558 Both SNP 0008.scaffold00029 782137 1 C T scaffold558 Both SNP 0008.scaffold00029 782148 1 T G scaffold558 Both SNP 0008.scaffold00029 782200 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 783647 7 ATTGCTT ....... scaffold558 ScafM SNP 0008.scaffold00029 783666 1 T C scaffold558 ScafM SNP 0008.scaffold00029 783689 1 T C scaffold558 ScafM SNP 0008.scaffold00029 783699 1 G C scaffold558 ScafM SNP 0008.scaffold00029 783734 1 G A scaffold558 ScafM SNP 0008.scaffold00029 783782 1 A C scaffold558 ScafM SNP 0008.scaffold00029 783849 1 T A scaffold558 ScafM SNP 0008.scaffold00029 783853 2 GC CT scaffold558 ScafM SNP 0008.scaffold00029 783883 1 A G scaffold558 ScafM SNP 0008.scaffold00029 783890 1 C A scaffold558 ScafM SNP 0008.scaffold00029 783911 1 A G scaffold558 ScafM SNP 0008.scaffold00029 783922 1 A C scaffold558 ScafM SNP 0008.scaffold00029 783978 1 C T scaffold558 ScafM SNP 0008.scaffold00029 784009 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 784017 1 . G scaffold558 ScafM SNP 0008.scaffold00029 784022 1 T G scaffold558 ScafM SNP 0008.scaffold00029 784053 1 T C scaffold558 ScafM SNP 0008.scaffold00029 784081 1 C T scaffold558 ScafM SNP 0008.scaffold00029 784183 1 G T scaffold558 ScafM SNP 0008.scaffold00029 784211 1 A G scaffold558 ScafM SNP 0008.scaffold00029 784230 1 G T scaffold558 ScafM INDEL 0008.scaffold00029 784237 3 GAC ..T scaffold558 ScafM SNP 0008.scaffold00029 784242 1 G T scaffold558 ScafM SNP 0008.scaffold00029 784274 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 784275 1 . A scaffold558 ScafM SNP 0008.scaffold00029 784287 1 T A scaffold558 ScafM SNP 0008.scaffold00029 784345 1 G T scaffold558 ScafM SNP 0008.scaffold00029 784395 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 786886 2 .. TT scaffold558 ScafM SNP 0008.scaffold00029 786894 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 786955 8 ........ ATGAAGCG scaffold558 ScafM SNP 0008.scaffold00029 786975 1 A C scaffold558 ScafM SNP 0008.scaffold00029 787022 1 C A scaffold558 ScafM SNP 0008.scaffold00029 787046 1 G A scaffold558 ScafM SNP 0008.scaffold00029 787049 1 T C scaffold558 ScafM SNP 0008.scaffold00029 787475 1 G A scaffold558 ScafM SNP 0008.scaffold00029 787481 1 T G scaffold558 ScafM SNP 0008.scaffold00029 787516 1 A G scaffold558 ScafM SNP 0008.scaffold00029 787743 1 A G scaffold558 ScafM SNP 0008.scaffold00029 787746 1 A C scaffold558 ScafM INDEL 0008.scaffold00029 787752 2 AT .. scaffold558 ScafM SNP 0008.scaffold00029 787756 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 787762 3 ... AAA scaffold558 ScafM SNP 0008.scaffold00029 787763 2 GG AA scaffold558 ScafM SNP 0008.scaffold00029 787782 2 AA GC scaffold558 ScafM SNP 0008.scaffold00029 787810 1 A G scaffold558 ScafM SNP 0008.scaffold00029 787814 1 A C scaffold558 ScafM SNP 0008.scaffold00029 787854 1 G T scaffold558 ScafM SNP 0008.scaffold00029 787890 1 T C scaffold558 Both SNP 0008.scaffold00029 787971 1 A T scaffold558 ScafM SNP 0008.scaffold00029 787976 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 787999 1 G . scaffold558 ScafM SNP 0008.scaffold00029 788002 1 A G scaffold558 Both SNP 0008.scaffold00029 788311 1 A G scaffold558 Both SNP 0008.scaffold00029 788439 1 G T scaffold558 Both SNP 0008.scaffold00029 788457 1 T A scaffold558 Both SNP 0008.scaffold00029 788966 1 T C scaffold558 ScafM SNP 0008.scaffold00029 789147 1 A G scaffold558 ScafM SNP 0008.scaffold00029 789171 1 G A scaffold558 ScafM SNP 0008.scaffold00029 792426 1 C A scaffold558 ScafM SNP 0008.scaffold00029 792430 1 A G scaffold558 ScafM SNP 0008.scaffold00029 792439 1 C G scaffold558 ScafM SNP 0008.scaffold00029 792442 1 A G scaffold558 ScafM SNP 0008.scaffold00029 792448 1 C T scaffold558 ScafM SNP 0008.scaffold00029 792462 1 T C scaffold558 ScafM SNP 0008.scaffold00029 792466 2 GG AA scaffold558 ScafM SNP 0008.scaffold00029 792479 1 T G scaffold558 ScafM SNP 0008.scaffold00029 792481 1 T C scaffold558 ScafM SNP 0008.scaffold00029 792509 1 A C scaffold558 ScafM SNP 0008.scaffold00029 792516 1 A G scaffold558 ScafM SNP 0008.scaffold00029 792522 1 T C scaffold558 ScafM SNP 0008.scaffold00029 792546 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 792618 3 ... TAC scaffold558 ScafM SNP 0008.scaffold00029 792625 1 C G scaffold558 ScafM SNP 0008.scaffold00029 793429 1 G T scaffold558 ScafM SNP 0008.scaffold00029 793431 2 CC TA scaffold558 ScafM SNP 0008.scaffold00029 793444 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 793457 7 ....... CTGTAGT scaffold558 ScafM INDEL 0008.scaffold00029 793458 1 . C scaffold558 ScafM INDEL 0008.scaffold00029 793459 1 . G scaffold558 ScafM SNP 0008.scaffold00029 793506 1 C A scaffold558 ScafM SNP 0008.scaffold00029 793530 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 793544 7 CAAAACT ....... scaffold558 ScafM SNP 0008.scaffold00029 793571 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 793704 1 . T scaffold558 ScafM SNP 0008.scaffold00029 793724 1 T C scaffold558 ScafM SNP 0008.scaffold00029 793733 1 A C scaffold558 ScafM SNP 0008.scaffold00029 793806 1 C G scaffold558 ScafM SNP 0008.scaffold00029 793812 1 G C scaffold558 ScafM SNP 0008.scaffold00029 793817 1 A T scaffold558 ScafM SNP 0008.scaffold00029 793833 1 T C scaffold558 ScafM SNP 0008.scaffold00029 793855 1 A C scaffold558 ScafM SNP 0008.scaffold00029 793858 1 A C scaffold558 Both SNP 0008.scaffold00029 794042 1 A G scaffold558 Both SNP 0008.scaffold00029 794053 1 T C scaffold558 Both SNP 0008.scaffold00029 794069 1 G T scaffold558 Both SNP 0008.scaffold00029 794113 1 T A scaffold558 Both SNP 0008.scaffold00029 794158 1 C T scaffold558 ScafM SNP 0008.scaffold00029 794180 1 T G scaffold558 ScafM SNP 0008.scaffold00029 794182 1 C T scaffold558 Both SNP 0008.scaffold00029 794204 1 A G scaffold558 Both SNP 0008.scaffold00029 794249 1 C T scaffold558 Both SNP 0008.scaffold00029 794288 1 G A scaffold558 ScafM SNP 0008.scaffold00029 794372 1 C T scaffold558 ScafM SNP 0008.scaffold00029 794374 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 794379 3 ... TAA scaffold558 ScafM SNP 0008.scaffold00029 794436 1 C T scaffold558 ScafM SNP 0008.scaffold00029 794449 1 G T scaffold558 ScafM SNP 0008.scaffold00029 794451 1 C T scaffold558 ScafM SNP 0008.scaffold00029 794518 1 A G scaffold558 ScafM SNP 0008.scaffold00029 794521 1 G C scaffold558 ScafM INDEL 0008.scaffold00029 794558 1 T . scaffold558 ScafM SNP 0008.scaffold00029 794592 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 794599 1 A . scaffold558 ScafM INDEL 0008.scaffold00029 794604 2 .. AA scaffold558 ScafM INDEL 0008.scaffold00029 794605 3 ... CAG scaffold558 ScafM INDEL 0008.scaffold00029 794607 1 . T scaffold558 ScafM SNP 0008.scaffold00029 794659 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 794660 1 . G scaffold558 ScafM SNP 0008.scaffold00029 794663 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 794667 1 . G scaffold558 ScafM SNP 0008.scaffold00029 794704 1 G C scaffold558 ScafM INDEL 0008.scaffold00029 794736 1 . A scaffold558 ScafM SNP 0008.scaffold00029 794747 1 T G scaffold558 ScafM SNP 0008.scaffold00029 794750 1 G A scaffold558 ScafM SNP 0008.scaffold00029 794752 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 794771 2 AG .. scaffold558 ScafM SNP 0008.scaffold00029 794810 1 A C scaffold558 ScafM SNP 0008.scaffold00029 795589 1 A C scaffold10149 ScafM SNP 0008.scaffold00029 795598 1 C T scaffold10149 ScafM SNP 0008.scaffold00029 795664 1 A G scaffold10149 ScafM SNP 0008.scaffold00029 795685 1 A G scaffold10149 ScafM INDEL 0008.scaffold00029 795689 2 .C GT scaffold10149 ScafM SNP 0008.scaffold00029 795693 1 C T scaffold10149 ScafM SNP 0008.scaffold00029 795702 1 A T scaffold10149 ScafM SNP 0008.scaffold00029 795712 1 G A scaffold10149 ScafM SNP 0008.scaffold00029 795729 1 A G scaffold10149 ScafM SNP 0008.scaffold00029 795778 1 G A scaffold10149 ScafM SNP 0008.scaffold00029 795782 1 C T scaffold10149 ScafM SNP 0008.scaffold00029 795802 1 A C scaffold10149 ScafM INDEL 0008.scaffold00029 795820 10 AACTCACTTT .......... scaffold10149 ScafM INDEL 0008.scaffold00029 795841 1 A . scaffold10149 ScafM INDEL 0008.scaffold00029 795844 1 . A scaffold10149 ScafM SNP 0008.scaffold00029 795846 1 T G scaffold10149 ScafM SNP 0008.scaffold00029 795849 1 A C scaffold10149 ScafM INDEL 0008.scaffold00029 795867 2 CT .. scaffold10149 ScafM SNP 0008.scaffold00029 795882 1 C T scaffold10149 ScafM SNP 0008.scaffold00029 795891 1 T G scaffold10149 ScafM SNP 0008.scaffold00029 795899 1 T G scaffold10149 ScafM SNP 0008.scaffold00029 796527 1 C G scaffold558 ScafM SNP 0008.scaffold00029 796529 1 A G scaffold558 ScafM SNP 0008.scaffold00029 796535 1 C A scaffold558 ScafM INDEL 0008.scaffold00029 796537 1 . C scaffold558 ScafM SNP 0008.scaffold00029 796544 2 GA TG scaffold558 ScafM SNP 0008.scaffold00029 796894 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 796907 6 ACGTGC ...... scaffold558 ScafM SNP 0008.scaffold00029 796931 1 T C scaffold558 ScafM SNP 0008.scaffold00029 796961 1 G T scaffold558 ScafM SNP 0008.scaffold00029 796971 1 T A scaffold558 ScafM SNP 0008.scaffold00029 796991 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 796995 1 . A scaffold558 ScafM SNP 0008.scaffold00029 797022 1 T G scaffold558 ScafM SNP 0008.scaffold00029 797025 1 G A scaffold558 ScafM SNP 0008.scaffold00029 797066 1 G A scaffold558 ScafM SNP 0008.scaffold00029 797079 1 G T scaffold558 ScafM INDEL 0008.scaffold00029 797084 2 AG .. scaffold558 ScafM SNP 0008.scaffold00029 797099 1 A T scaffold558 ScafM SNP 0008.scaffold00029 797127 1 G A scaffold558 ScafM SNP 0008.scaffold00029 797129 1 C A scaffold558 ScafM SNP 0008.scaffold00029 797164 1 T G scaffold558 ScafM SNP 0008.scaffold00029 797204 1 T C scaffold558 ScafM SNP 0008.scaffold00029 797222 1 C A scaffold558 ScafM SNP 0008.scaffold00029 797229 1 T G scaffold558 ReadM SNP 0008.scaffold00029 797487 1 G A - ReadM SNP 0008.scaffold00029 797609 1 C T - ScafM SNP 0008.scaffold00029 797766 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 797773 3 ... TTA scaffold558 ReadM INDEL 0008.scaffold00029 797916 1 . A - Both SNP 0008.scaffold00029 798083 1 A G scaffold558 Both SNP 0008.scaffold00029 798252 1 C T scaffold558 ReadM SNP 0008.scaffold00029 798265 1 A G - ReadM SNP 0008.scaffold00029 798296 1 T A - ReadM SNP 0008.scaffold00029 798936 1 T C - ReadM SNP 0008.scaffold00029 798966 1 C T - ReadM SNP 0008.scaffold00029 798976 1 T G - ReadM SNP 0008.scaffold00029 799031 1 A G - Both SNP 0008.scaffold00029 799166 1 A C scaffold558 Both INDEL 0008.scaffold00029 799291 3 TAT ... scaffold558 Both SNP 0008.scaffold00029 799472 1 G A scaffold558 Both SNP 0008.scaffold00029 799495 1 C G scaffold558 Both SNP 0008.scaffold00029 799527 1 A C scaffold558 ReadM SNP 0008.scaffold00029 799722 1 G T - ReadM SNP 0008.scaffold00029 799728 1 G A - ReadM SNP 0008.scaffold00029 799943 1 A G - ReadM SNP 0008.scaffold00029 800038 1 A G - ReadM SNP 0008.scaffold00029 800150 1 A G - ReadM SNP 0008.scaffold00029 800306 1 C T - ReadM SNP 0008.scaffold00029 800604 1 T A - ReadM INDEL 0008.scaffold00029 800777 1 . A - ReadM SNP 0008.scaffold00029 800790 1 A T - ReadM SNP 0008.scaffold00029 800848 1 C T - Both SNP 0008.scaffold00029 800936 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 800997 3 TTT ... scaffold558 Both SNP 0008.scaffold00029 801041 1 G T scaffold558 Both SNP 0008.scaffold00029 801133 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 801231 4 AAAA .... scaffold558 ScafM INDEL 0008.scaffold00029 801296 7 TGTAATA ....... scaffold558 Both SNP 0008.scaffold00029 801344 1 A C scaffold558 Both INDEL 0008.scaffold00029 801354 1 A . scaffold558 Both SNP 0008.scaffold00029 801416 1 G A scaffold558 Both SNP 0008.scaffold00029 801448 1 A T scaffold558 Both SNP 0008.scaffold00029 801471 1 A G scaffold558 Both SNP 0008.scaffold00029 801513 2 TT CC scaffold558 Both SNP 0008.scaffold00029 801709 1 G T scaffold558 Both SNP 0008.scaffold00029 801731 1 T C scaffold558 Both SNP 0008.scaffold00029 801785 1 C T scaffold558 Both SNP 0008.scaffold00029 801800 1 T C scaffold558 Both SNP 0008.scaffold00029 802076 1 G T scaffold558 ScafM INDEL 0008.scaffold00029 802155 4 GAAT .... scaffold558 ScafM SNP 0008.scaffold00029 802162 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 802182 1 A . scaffold558 ScafM INDEL 0008.scaffold00029 802201 2 .. AT scaffold558 ScafM SNP 0008.scaffold00029 802209 1 G T scaffold558 ScafM SNP 0008.scaffold00029 802211 1 C G scaffold558 ScafM SNP 0008.scaffold00029 802430 1 G T scaffold558 ScafM SNP 0008.scaffold00029 802434 1 G T scaffold558 ScafM SNP 0008.scaffold00029 802514 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 802551 1 . T scaffold558 ScafM SNP 0008.scaffold00029 802574 1 C G scaffold558 ScafM SNP 0008.scaffold00029 804217 1 A C scaffold558 ScafM SNP 0008.scaffold00029 804253 1 G A scaffold558 ScafM SNP 0008.scaffold00029 804270 2 AC TA scaffold558 ScafM SNP 0008.scaffold00029 804273 1 C T scaffold558 ScafM SNP 0008.scaffold00029 804276 1 C T scaffold558 ScafM SNP 0008.scaffold00029 804280 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 804290 8 CAATAAGG ........ scaffold558 ScafM SNP 0008.scaffold00029 804302 2 AA TG scaffold558 ScafM SNP 0008.scaffold00029 804307 1 A G scaffold558 ScafM SNP 0008.scaffold00029 804319 1 T C scaffold558 ScafM SNP 0008.scaffold00029 804324 1 C G scaffold558 ScafM SNP 0008.scaffold00029 804338 1 C T scaffold558 ScafM SNP 0008.scaffold00029 804343 1 C A scaffold558 ScafM SNP 0008.scaffold00029 804355 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 804359 2 AA .C scaffold558 ScafM INDEL 0008.scaffold00029 804370 1 A . scaffold558 ScafM SNP 0008.scaffold00029 804378 1 A T scaffold558 ScafM SNP 0008.scaffold00029 804388 1 A G scaffold558 ScafM SNP 0008.scaffold00029 804393 1 T G scaffold558 ScafM SNP 0008.scaffold00029 804399 1 T A scaffold558 ScafM SNP 0008.scaffold00029 804403 1 T C scaffold558 ScafM SNP 0008.scaffold00029 804410 1 T C scaffold558 ScafM SNP 0008.scaffold00029 804417 2 TG CA scaffold558 ScafM SNP 0008.scaffold00029 804424 1 G T scaffold558 ScafM SNP 0008.scaffold00029 804429 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 804432 1 . A scaffold558 ScafM SNP 0008.scaffold00029 804434 1 G A scaffold558 ScafM SNP 0008.scaffold00029 804441 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 804447 3 AAA ... scaffold558 ScafM INDEL 0008.scaffold00029 804462 1 . G scaffold558 ScafM INDEL 0008.scaffold00029 804463 1 . C scaffold558 ScafM INDEL 0008.scaffold00029 804464 5 ..... GACGA scaffold558 ScafM SNP 0008.scaffold00029 804478 1 C T scaffold558 ScafM SNP 0008.scaffold00029 804493 1 A C scaffold558 ScafM SNP 0008.scaffold00029 804503 1 A C scaffold558 ScafM SNP 0008.scaffold00029 804508 1 T A scaffold558 ScafM INDEL 0008.scaffold00029 804514 1 C . scaffold558 ScafM SNP 0008.scaffold00029 804521 2 AT GA scaffold558 ScafM SNP 0008.scaffold00029 804524 1 A T scaffold558 ScafM INDEL 0008.scaffold00029 804530 1 . G scaffold558 ScafM SNP 0008.scaffold00029 804533 1 A G scaffold558 ScafM SNP 0008.scaffold00029 804544 1 C T scaffold558 ScafM SNP 0008.scaffold00029 804548 2 TT CC scaffold558 ScafM SNP 0008.scaffold00029 804573 2 CG GA scaffold558 ScafM SNP 0008.scaffold00029 804591 1 T C scaffold558 ScafM SNP 0008.scaffold00029 804623 1 G A scaffold558 ScafM SNP 0008.scaffold00029 804636 3 CAT GGC scaffold558 ScafM SNP 0008.scaffold00029 804642 1 G A scaffold558 ScafM SNP 0008.scaffold00029 804645 1 T A scaffold558 ScafM SNP 0008.scaffold00029 805303 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805313 1 C A scaffold558 ScafM SNP 0008.scaffold00029 805318 1 T A scaffold558 ScafM SNP 0008.scaffold00029 805338 1 C T scaffold558 ScafM SNP 0008.scaffold00029 805344 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805362 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805367 1 C G scaffold558 ScafM SNP 0008.scaffold00029 805389 1 T G scaffold558 ScafM INDEL 0008.scaffold00029 805399 1 . A scaffold558 ScafM INDEL 0008.scaffold00029 805410 2 AA .. scaffold558 ScafM SNP 0008.scaffold00029 805429 1 A C scaffold558 ScafM SNP 0008.scaffold00029 805432 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805451 3 AAG CTT scaffold558 ScafM SNP 0008.scaffold00029 805459 1 C A scaffold558 ScafM SNP 0008.scaffold00029 805465 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805481 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805484 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805493 2 TG CA scaffold558 ScafM SNP 0008.scaffold00029 805505 2 TT AA scaffold558 ScafM SNP 0008.scaffold00029 805518 1 C A scaffold558 ScafM SNP 0008.scaffold00029 805530 1 T A scaffold558 ScafM SNP 0008.scaffold00029 805542 1 A C scaffold558 ScafM SNP 0008.scaffold00029 805568 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 805570 2 AA .G scaffold558 ScafM SNP 0008.scaffold00029 805583 1 C T scaffold558 ScafM SNP 0008.scaffold00029 805585 1 C A scaffold558 ScafM SNP 0008.scaffold00029 805594 2 GG CA scaffold558 ScafM SNP 0008.scaffold00029 805598 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805601 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 805611 3 GGC ... scaffold558 ScafM INDEL 0008.scaffold00029 805616 10 AGGTTAAAAT .......... scaffold558 ScafM INDEL 0008.scaffold00029 805628 3 GCG ... scaffold558 ScafM INDEL 0008.scaffold00029 805633 1 C . scaffold558 ScafM INDEL 0008.scaffold00029 805635 3 GGC ... scaffold558 ScafM SNP 0008.scaffold00029 805653 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805660 2 AT CC scaffold558 ScafM SNP 0008.scaffold00029 805678 2 CG TA scaffold558 ScafM SNP 0008.scaffold00029 805702 1 T A scaffold558 ScafM SNP 0008.scaffold00029 805704 2 AC GT scaffold558 ScafM SNP 0008.scaffold00029 805715 1 T G scaffold558 ScafM SNP 0008.scaffold00029 805721 1 T G scaffold558 ScafM SNP 0008.scaffold00029 805733 1 T C scaffold558 ScafM INDEL 0008.scaffold00029 805736 8 ........ ACACACAC scaffold558 ScafM SNP 0008.scaffold00029 805751 1 G C scaffold558 ScafM SNP 0008.scaffold00029 805763 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805768 1 G A scaffold558 ScafM INDEL 0008.scaffold00029 805772 7 ....... CGCCACT scaffold558 ScafM SNP 0008.scaffold00029 805799 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 805802 5 ..... ACCCA scaffold558 ScafM SNP 0008.scaffold00029 805812 1 C G scaffold558 ScafM INDEL 0008.scaffold00029 805823 5 CGACC ....T scaffold558 ScafM SNP 0008.scaffold00029 805842 2 GC AT scaffold558 ScafM SNP 0008.scaffold00029 805864 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805882 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805896 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805900 1 T C scaffold558 ScafM SNP 0008.scaffold00029 805909 1 G A scaffold558 ScafM SNP 0008.scaffold00029 805911 1 A G scaffold558 ScafM SNP 0008.scaffold00029 805931 1 C T scaffold558 ScafM SNP 0008.scaffold00029 805964 2 GG CA scaffold558 ScafM SNP 0008.scaffold00029 807621 1 C T scaffold558 ScafM SNP 0008.scaffold00029 807632 1 C T scaffold558 ScafM SNP 0008.scaffold00029 807646 1 A G scaffold558 ScafM INDEL 0008.scaffold00029 807648 2 .. TT scaffold558 ScafM SNP 0008.scaffold00029 807650 1 C T scaffold558 ScafM SNP 0008.scaffold00029 807659 1 T A scaffold558 ScafM SNP 0008.scaffold00029 807662 1 T G scaffold558 ScafM SNP 0008.scaffold00029 807668 1 C T scaffold558 ScafM SNP 0008.scaffold00029 807688 1 A G scaffold558 ScafM SNP 0008.scaffold00029 807697 1 A G scaffold558 ScafM SNP 0008.scaffold00029 807706 1 C T scaffold558 ScafM SNP 0008.scaffold00029 807736 1 A G scaffold558 ScafM SNP 0008.scaffold00029 807749 1 T C scaffold558 ScafM SNP 0008.scaffold00029 807761 1 A G scaffold558 ScafM SNP 0008.scaffold00029 807769 1 G A scaffold558 ScafM SNP 0008.scaffold00029 807789 1 G A scaffold558 ScafM SNP 0008.scaffold00029 807797 2 GT AC scaffold558 ScafM SNP 0008.scaffold00029 807807 1 C A scaffold558 ScafM SNP 0008.scaffold00029 807814 1 G A scaffold558 ScafM SNP 0008.scaffold00029 807818 3 TTT AAC scaffold558 ScafM INDEL 0008.scaffold00029 807822 1 . G scaffold558 ScafM SNP 0008.scaffold00029 807827 1 A C scaffold558 ScafM SNP 0008.scaffold00029 807832 1 A C scaffold558 ScafM SNP 0008.scaffold00029 807850 1 T C scaffold558 ScafM SNP 0008.scaffold00029 807863 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 807865 2 GC .. scaffold558 ScafM SNP 0008.scaffold00029 807873 2 GA AG scaffold558 ScafM SNP 0008.scaffold00029 807898 1 G T scaffold558 ScafM SNP 0008.scaffold00029 807920 2 CG TA scaffold558 ScafM SNP 0008.scaffold00029 807945 1 T C scaffold558 ScafM SNP 0008.scaffold00029 807947 1 G A scaffold558 ScafM SNP 0008.scaffold00029 807956 1 A G scaffold558 ScafM SNP 0008.scaffold00029 807961 1 T C scaffold558 ScafM SNP 0008.scaffold00029 807970 1 C G scaffold558 ScafM SNP 0008.scaffold00029 808005 1 T C scaffold558 ScafM SNP 0008.scaffold00029 808012 1 T C scaffold558 ScafM SNP 0008.scaffold00029 808033 1 A C scaffold558 ScafM SNP 0008.scaffold00029 808040 1 T G scaffold558 ScafM SNP 0008.scaffold00029 808051 3 TGT CCC scaffold558 ScafM SNP 0008.scaffold00029 808063 1 T G scaffold558 ScafM SNP 0008.scaffold00029 808089 1 A C scaffold558 ScafM SNP 0008.scaffold00029 808095 1 G A scaffold558 ScafM SNP 0008.scaffold00029 808098 2 CG TC scaffold558 ScafM SNP 0008.scaffold00029 808109 1 T C scaffold558 ScafM SNP 0008.scaffold00029 808133 1 C T scaffold558 ScafM SNP 0008.scaffold00029 808144 1 T G scaffold558 ScafM SNP 0008.scaffold00029 808149 2 CT AC scaffold558 ScafM SNP 0008.scaffold00029 808166 1 A T scaffold558 ScafM SNP 0008.scaffold00029 808189 2 TG AA scaffold558 ScafM SNP 0008.scaffold00029 808271 1 C A scaffold558 ScafM SNP 0008.scaffold00029 808293 1 T C scaffold558 ScafM SNP 0008.scaffold00029 808308 1 C T scaffold558 ScafM INDEL 0008.scaffold00029 808325 2 TA .. scaffold558 ScafM INDEL 0008.scaffold00029 808329 1 A . scaffold558 ScafM SNP 0008.scaffold00029 808349 1 A C scaffold558 ScafM SNP 0008.scaffold00029 808371 1 G A scaffold558 ScafM SNP 0008.scaffold00029 808378 2 CA TG scaffold558 ScafM INDEL 0008.scaffold00029 808408 3 ATT ... scaffold558 ScafM SNP 0008.scaffold00029 808412 1 A C scaffold558 ScafM SNP 0008.scaffold00029 808423 2 CA TG scaffold558 ScafM SNP 0008.scaffold00029 808436 1 C T scaffold558 ScafM SNP 0008.scaffold00029 808457 1 C T scaffold558 ScafM SNP 0008.scaffold00029 808485 1 A T scaffold558 ScafM SNP 0008.scaffold00029 808505 1 G C scaffold558 ScafM SNP 0008.scaffold00029 808507 1 G A scaffold558 ScafM SNP 0008.scaffold00029 808514 2 TC GT scaffold558 ScafM SNP 0008.scaffold00029 808523 1 A C scaffold558 ScafM SNP 0008.scaffold00029 808535 1 C T scaffold558 ScafM SNP 0008.scaffold00029 810321 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810328 1 T A scaffold63705 ScafM SNP 0008.scaffold00029 810337 1 T C scaffold63705 ScafM INDEL 0008.scaffold00029 810340 2 CT .. scaffold63705 ScafM SNP 0008.scaffold00029 810353 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810360 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810393 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810405 1 A G scaffold63705 ScafM INDEL 0008.scaffold00029 810407 1 T . scaffold63705 ScafM INDEL 0008.scaffold00029 810410 5 ACCTT ..... scaffold63705 ScafM INDEL 0008.scaffold00029 810418 6 CATAGG ...... scaffold63705 ScafM SNP 0008.scaffold00029 810436 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810449 1 T C scaffold63705 ScafM SNP 0008.scaffold00029 810452 1 G T scaffold63705 ScafM SNP 0008.scaffold00029 810470 1 T A scaffold63705 ScafM SNP 0008.scaffold00029 810472 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810474 1 T A scaffold63705 ScafM SNP 0008.scaffold00029 810476 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810478 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810480 3 GTG ACA scaffold63705 ScafM INDEL 0008.scaffold00029 810487 7 ....... TATATAA scaffold63705 ScafM SNP 0008.scaffold00029 810493 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810496 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810507 1 C G scaffold63705 ScafM SNP 0008.scaffold00029 810517 1 T C scaffold63705 ScafM SNP 0008.scaffold00029 810534 1 A T scaffold63705 ScafM INDEL 0008.scaffold00029 810546 4 .... GCAC scaffold63705 ScafM SNP 0008.scaffold00029 810569 3 CTC TAT scaffold63705 ScafM SNP 0008.scaffold00029 810585 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810587 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810591 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810610 1 C A scaffold63705 ScafM SNP 0008.scaffold00029 810613 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810628 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810634 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810637 1 G A scaffold63705 ScafM INDEL 0008.scaffold00029 810640 2 TC .. scaffold63705 ScafM SNP 0008.scaffold00029 810650 1 G T scaffold63705 ScafM INDEL 0008.scaffold00029 810652 13 GAAAGCAAAAGCA ............. scaffold63705 ScafM INDEL 0008.scaffold00029 810666 1 G . scaffold63705 ScafM SNP 0008.scaffold00029 810674 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810684 1 T A scaffold63705 ScafM INDEL 0008.scaffold00029 810692 3 TCT ... scaffold63705 ScafM SNP 0008.scaffold00029 810696 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810705 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810717 1 C A scaffold63705 ScafM SNP 0008.scaffold00029 810722 2 CA GG scaffold63705 ScafM SNP 0008.scaffold00029 810726 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810744 2 CG AT scaffold63705 ScafM INDEL 0008.scaffold00029 810747 1 . G scaffold63705 ScafM SNP 0008.scaffold00029 810753 1 T A scaffold63705 ScafM SNP 0008.scaffold00029 810757 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810767 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810769 1 A C scaffold63705 ScafM SNP 0008.scaffold00029 810772 2 CT TC scaffold63705 ScafM SNP 0008.scaffold00029 810775 1 G T scaffold63705 ScafM SNP 0008.scaffold00029 810784 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810788 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810793 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810795 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810819 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810830 2 TT AA scaffold63705 ScafM SNP 0008.scaffold00029 810833 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810842 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810847 3 ATA GGT scaffold63705 ScafM SNP 0008.scaffold00029 810860 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 810871 1 G A scaffold63705 ScafM INDEL 0008.scaffold00029 810881 2 GG .. scaffold63705 ScafM SNP 0008.scaffold00029 810895 1 G A scaffold63705 ScafM INDEL 0008.scaffold00029 810898 1 A . scaffold63705 ScafM SNP 0008.scaffold00029 810901 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810905 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810909 2 GC AT scaffold63705 ScafM SNP 0008.scaffold00029 810914 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810917 1 T C scaffold63705 ScafM SNP 0008.scaffold00029 810920 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810922 1 T C scaffold63705 ScafM SNP 0008.scaffold00029 810933 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810937 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810948 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810950 1 T G scaffold63705 ScafM SNP 0008.scaffold00029 810963 1 A G scaffold63705 ScafM SNP 0008.scaffold00029 810965 1 A T scaffold63705 ScafM INDEL 0008.scaffold00029 810976 7 ....... AGTATAA scaffold63705 ScafM SNP 0008.scaffold00029 810977 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 810979 1 A C scaffold63705 ScafM SNP 0008.scaffold00029 810985 1 A C scaffold63705 ScafM SNP 0008.scaffold00029 811016 1 C T scaffold63705 ScafM SNP 0008.scaffold00029 811020 1 G A scaffold63705 ScafM SNP 0008.scaffold00029 811026 1 A G scaffold63705 ScafM INDEL 0008.scaffold00029 811032 1 . T scaffold63705 ScafM SNP 0008.scaffold00029 811042 1 G A scaffold63705 ScafM INDEL 0008.scaffold00029 811072 14 ATATAAAATGAGGA .............. scaffold63705 ScafM SNP 0008.scaffold00029 811102 1 T C scaffold63705 ScafM SNP 0008.scaffold00029 811104 1 C T scaffold63705 ReadM SNP 0008.scaffold00029 819024 1 A T - ReadM SNP 0008.scaffold00029 819419 1 G C - ReadM SNP 0008.scaffold00029 819449 1 C T - ScafM SNP 0008.scaffold00029 821984 2 GA AT scaffold4572 ScafM SNP 0008.scaffold00029 821992 1 T C scaffold4572 ScafM SNP 0008.scaffold00029 822008 1 T C scaffold4572 ScafM SNP 0008.scaffold00029 822022 1 T C scaffold4572 ScafM SNP 0008.scaffold00029 822050 2 CT TC scaffold4572 ScafM SNP 0008.scaffold00029 822054 1 T G scaffold4572 ScafM SNP 0008.scaffold00029 822060 1 T C scaffold4572 ScafM SNP 0008.scaffold00029 822068 1 C T scaffold4572 ScafM SNP 0008.scaffold00029 822075 1 G T scaffold4572 ScafM SNP 0008.scaffold00029 822090 1 A C scaffold4572 ScafM SNP 0008.scaffold00029 822132 1 G C scaffold4572 ScafM SNP 0008.scaffold00029 829193 1 T C scaffold25914 ScafM SNP 0008.scaffold00029 829334 1 T C scaffold25914 ScafM SNP 0008.scaffold00029 829348 1 A G scaffold25914 ScafM SNP 0008.scaffold00029 829374 1 T G scaffold25914 ScafM SNP 0008.scaffold00029 829457 1 G T scaffold25914 ScafM SNP 0008.scaffold00029 829605 1 C T scaffold25914 ScafM SNP 0008.scaffold00029 829728 1 T C scaffold25914 ScafM SNP 0008.scaffold00029 829741 1 C G scaffold25914 ScafM SNP 0008.scaffold00029 829813 1 G A scaffold25914 ScafM INDEL 0008.scaffold00029 829877 1 G . scaffold25914 ScafM INDEL 0008.scaffold00029 829894 1 T . scaffold25914 ScafM SNP 0008.scaffold00029 829967 1 T G scaffold25914 ScafM SNP 0008.scaffold00029 830020 1 A G scaffold25914 ScafM SNP 0008.scaffold00029 830037 1 A G scaffold25914 ScafM SNP 0008.scaffold00029 837591 1 G A scaffold43540 ScafM INDEL 0008.scaffold00029 837672 1 T . scaffold43540 ScafM INDEL 0008.scaffold00029 837825 1 . G scaffold43540 ScafM INDEL 0008.scaffold00029 837832 1 C . scaffold43540 ScafM SNP 0008.scaffold00029 838060 1 T G scaffold43540 ScafM SNP 0008.scaffold00029 838179 1 A T scaffold43540 ScafM SNP 0008.scaffold00029 838300 1 T C scaffold43540 ScafM INDEL 0008.scaffold00029 838377 1 . A scaffold43540 ScafM SNP 0008.scaffold00029 849240 2 TT CC scaffold4111 ScafM SNP 0008.scaffold00029 849249 1 C T scaffold4111 ScafM INDEL 0008.scaffold00029 849273 1 T . scaffold4111 ScafM SNP 0008.scaffold00029 849279 1 A G scaffold4111 ScafM SNP 0008.scaffold00029 849288 1 C A scaffold4111 ScafM SNP 0008.scaffold00029 849297 1 A C scaffold4111 ScafM SNP 0008.scaffold00029 849302 1 T C scaffold4111 ScafM SNP 0008.scaffold00029 849308 1 C A scaffold4111 ScafM SNP 0008.scaffold00029 849333 1 T G scaffold4111 ScafM SNP 0008.scaffold00029 849346 1 G T scaffold4111 ScafM SNP 0008.scaffold00029 849351 1 T A scaffold4111 ScafM SNP 0008.scaffold00029 849356 1 G A scaffold4111 ScafM SNP 0008.scaffold00029 851656 2 CA TC scaffold13954 ScafM SNP 0008.scaffold00029 851662 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 851666 1 C A scaffold13954 ScafM SNP 0008.scaffold00029 851702 1 A C scaffold13954 ScafM SNP 0008.scaffold00029 851707 1 A C scaffold13954 ScafM SNP 0008.scaffold00029 851719 1 A T scaffold13954 ScafM INDEL 0008.scaffold00029 851733 1 A . scaffold13954 ScafM SNP 0008.scaffold00029 851764 1 A T scaffold13954 ScafM INDEL 0008.scaffold00029 851806 2 .. AA scaffold13954 ScafM INDEL 0008.scaffold00029 851849 2 AG .. scaffold13954 ScafM SNP 0008.scaffold00029 851876 1 A G scaffold13954 ScafM INDEL 0008.scaffold00029 852282 2 CG .. scaffold13954 ScafM SNP 0008.scaffold00029 852292 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 852340 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 852346 2 CA AC scaffold13954 ScafM INDEL 0008.scaffold00029 852350 1 A . scaffold13954 ScafM SNP 0008.scaffold00029 852369 1 C A scaffold13954 ScafM SNP 0008.scaffold00029 852380 2 TT CC scaffold13954 ScafM SNP 0008.scaffold00029 852388 1 T A scaffold13954 ScafM INDEL 0008.scaffold00029 852395 2 .. AG scaffold13954 ScafM SNP 0008.scaffold00029 852424 1 C G scaffold13954 ScafM SNP 0008.scaffold00029 852434 1 A G scaffold13954 ScafM INDEL 0008.scaffold00029 852435 1 . T scaffold13954 ScafM SNP 0008.scaffold00029 852439 1 T A scaffold13954 ScafM SNP 0008.scaffold00029 852441 2 AA TT scaffold13954 ScafM SNP 0008.scaffold00029 852451 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 852455 1 A C scaffold13954 ScafM SNP 0008.scaffold00029 852484 1 A T scaffold13954 ScafM SNP 0008.scaffold00029 852535 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 852539 1 T . scaffold13954 ScafM SNP 0008.scaffold00029 852545 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 852564 1 G T scaffold13954 ScafM SNP 0008.scaffold00029 852569 1 C A scaffold13954 ScafM INDEL 0008.scaffold00029 852594 1 . T scaffold13954 ScafM INDEL 0008.scaffold00029 852602 3 ... TTT scaffold13954 ScafM INDEL 0008.scaffold00029 852603 3 ... TTT scaffold13954 ScafM SNP 0008.scaffold00029 852633 1 G T scaffold13954 ScafM SNP 0008.scaffold00029 852639 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 853055 1 G A scaffold13954 ScafM INDEL 0008.scaffold00029 853059 3 TAC ... scaffold13954 ScafM SNP 0008.scaffold00029 853065 1 T G scaffold13954 ScafM SNP 0008.scaffold00029 853068 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 853095 1 A C scaffold13954 ScafM SNP 0008.scaffold00029 853114 1 T C scaffold13954 ScafM INDEL 0008.scaffold00029 853122 2 .. TA scaffold13954 ScafM SNP 0008.scaffold00029 853126 1 A T scaffold13954 ScafM INDEL 0008.scaffold00029 853157 1 A . scaffold13954 ScafM INDEL 0008.scaffold00029 853203 1 A . scaffold13954 ScafM SNP 0008.scaffold00029 853205 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 853207 1 T . scaffold13954 Both SNP 0008.scaffold00029 853239 1 A T scaffold13954 ScafM SNP 0008.scaffold00029 853567 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 853600 1 G C scaffold13954 ScafM SNP 0008.scaffold00029 853614 1 A T scaffold13954 ScafM SNP 0008.scaffold00029 853623 1 C G scaffold13954 ScafM SNP 0008.scaffold00029 853633 1 G C scaffold13954 ScafM SNP 0008.scaffold00029 853644 1 C G scaffold13954 ScafM INDEL 0008.scaffold00029 853667 3 ... TAT scaffold13954 ScafM SNP 0008.scaffold00029 853670 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 853703 1 A T scaffold13954 ScafM INDEL 0008.scaffold00029 853730 4 ATTT ...G scaffold13954 ScafM SNP 0008.scaffold00029 853796 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 853802 1 T A scaffold13954 ScafM SNP 0008.scaffold00029 853807 1 C G scaffold13954 ScafM SNP 0008.scaffold00029 853826 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 853834 1 A G scaffold13954 Both SNP 0008.scaffold00029 853859 1 G T scaffold13954 Both SNP 0008.scaffold00029 853884 1 T A scaffold13954 Both SNP 0008.scaffold00029 853921 1 G T scaffold13954 ScafM SNP 0008.scaffold00029 854055 1 T G scaffold13954 ScafM SNP 0008.scaffold00029 854067 1 C A scaffold13954 ScafM INDEL 0008.scaffold00029 854075 2 .. AC scaffold13954 Both SNP 0008.scaffold00029 854119 1 G C scaffold13954 Both SNP 0008.scaffold00029 854146 1 A C scaffold13954 ScafM INDEL 0008.scaffold00029 854208 13 ............. GCTCTTAATTGTG scaffold13954 ScafM INDEL 0008.scaffold00029 854209 1 . G scaffold13954 ScafM INDEL 0008.scaffold00029 854235 9 ......... TGTGATTGT scaffold13954 Both SNP 0008.scaffold00029 854341 1 T C scaffold13954 Both SNP 0008.scaffold00029 854413 1 G A scaffold13954 Both SNP 0008.scaffold00029 854501 1 A G scaffold13954 Both SNP 0008.scaffold00029 854592 1 C G scaffold13954 Both INDEL 0008.scaffold00029 854684 1 A . scaffold13954 Both INDEL 0008.scaffold00029 854712 1 T . scaffold13954 Both SNP 0008.scaffold00029 854770 1 G T scaffold13954 Both SNP 0008.scaffold00029 854800 1 T C scaffold13954 Both SNP 0008.scaffold00029 854949 1 G A scaffold13954 Both SNP 0008.scaffold00029 854969 1 T C scaffold13954 Both SNP 0008.scaffold00029 855005 1 C T scaffold13954 Both SNP 0008.scaffold00029 855109 1 G A scaffold13954 Both SNP 0008.scaffold00029 855167 1 A C scaffold13954 Both SNP 0008.scaffold00029 855228 1 T A scaffold13954 ReadM SNP 0008.scaffold00029 855656 1 C T - ReadM SNP 0008.scaffold00029 855723 1 A G - ReadM SNP 0008.scaffold00029 855774 1 G A - ReadM SNP 0008.scaffold00029 855886 1 C T - ReadM SNP 0008.scaffold00029 855926 1 A C - ReadM INDEL 0008.scaffold00029 856025 2 .. AG - ReadM SNP 0008.scaffold00029 856091 1 T C - ReadM SNP 0008.scaffold00029 856156 1 T C - ReadM SNP 0008.scaffold00029 856282 1 G A - ReadM SNP 0008.scaffold00029 856462 1 T G - ScafM INDEL 0008.scaffold00029 857366 7 AGTTATT ....... scaffold13954 ScafM SNP 0008.scaffold00029 857429 1 G T scaffold13954 ScafM INDEL 0008.scaffold00029 857483 2 .. AG scaffold13954 ScafM SNP 0008.scaffold00029 857485 1 G T scaffold13954 Both SNP 0008.scaffold00029 857556 1 G T scaffold13954 ReadM SNP 0008.scaffold00029 857661 1 G T - ReadM SNP 0008.scaffold00029 857698 1 A G - ReadM SNP 0008.scaffold00029 857754 1 C T - Both SNP 0008.scaffold00029 857798 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 857811 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 857826 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 857836 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 857838 1 T C scaffold13954 Both SNP 0008.scaffold00029 857872 1 G A scaffold13954 Both SNP 0008.scaffold00029 857924 1 C T scaffold13954 Both SNP 0008.scaffold00029 857941 1 T C scaffold13954 Both SNP 0008.scaffold00029 857955 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 858044 5 ..... ATATT scaffold13954 ScafM INDEL 0008.scaffold00029 858156 5 ..... CTATA scaffold13954 ScafM INDEL 0008.scaffold00029 858160 9 ......... TATTTAAGG scaffold13954 ScafM INDEL 0008.scaffold00029 858162 8 ........ TGACCAAA scaffold13954 ScafM SNP 0008.scaffold00029 858170 1 G A scaffold13954 Both SNP 0008.scaffold00029 858192 1 C G scaffold13954 Both SNP 0008.scaffold00029 858253 1 T A scaffold13954 ScafM INDEL 0008.scaffold00029 858275 1 A . scaffold13954 ScafM SNP 0008.scaffold00029 858277 2 AA TT scaffold13954 ScafM SNP 0008.scaffold00029 858283 1 A G scaffold13954 ReadM INDEL 0008.scaffold00029 858345 2 AG .. - ReadM SNP 0008.scaffold00029 858431 1 A G - ReadM SNP 0008.scaffold00029 858446 1 A C - ReadM SNP 0008.scaffold00029 858772 1 T C - ScafM INDEL 0008.scaffold00029 858900 3 ... AAA scaffold13954 ScafM SNP 0008.scaffold00029 858902 1 C A scaffold13954 Both SNP 0008.scaffold00029 858932 1 G A scaffold13954 Both SNP 0008.scaffold00029 859198 1 G A scaffold13954 Both SNP 0008.scaffold00029 859317 1 A G scaffold13954 Both SNP 0008.scaffold00029 859532 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 859644 2 AT .. scaffold13954 ScafM SNP 0008.scaffold00029 859648 2 CA TC scaffold13954 ReadM SNP 0008.scaffold00029 859912 1 T A - ScafM SNP 0008.scaffold00029 860159 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 860241 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 860277 1 C T scaffold13954 ReadM SNP 0008.scaffold00029 860816 1 T C - ReadM SNP 0008.scaffold00029 860844 1 G A - ReadM SNP 0008.scaffold00029 860927 1 C T - ReadM INDEL 0008.scaffold00029 861084 1 . T - ReadM SNP 0008.scaffold00029 862272 1 C T - ReadM SNP 0008.scaffold00029 862372 1 G A - ReadM SNP 0008.scaffold00029 862389 1 T C - ReadM SNP 0008.scaffold00029 862522 1 C T - ReadM SNP 0008.scaffold00029 863078 1 T C - ReadM SNP 0008.scaffold00029 863215 1 C T - ReadM SNP 0008.scaffold00029 863325 1 A G - ReadM SNP 0008.scaffold00029 863370 1 G A - ReadM SNP 0008.scaffold00029 863426 1 A G - ReadM SNP 0008.scaffold00029 863454 1 T C - ReadM SNP 0008.scaffold00029 863725 1 T A - ReadM SNP 0008.scaffold00029 863847 1 C T - ReadM SNP 0008.scaffold00029 863928 1 C A - ReadM SNP 0008.scaffold00029 864341 1 G A - ReadM INDEL 0008.scaffold00029 865505 2 TT .. - ReadM SNP 0008.scaffold00029 865579 1 T C - ReadM SNP 0008.scaffold00029 865608 1 A T - ReadM SNP 0008.scaffold00029 865687 1 T A - Both SNP 0008.scaffold00029 865996 1 C G scaffold13954 Both SNP 0008.scaffold00029 866120 1 A G scaffold13954 Both SNP 0008.scaffold00029 866128 1 C G scaffold13954 Both SNP 0008.scaffold00029 866248 1 G C scaffold13954 Both INDEL 0008.scaffold00029 866360 3 GAG ... scaffold13954 Both SNP 0008.scaffold00029 866639 1 T C scaffold13954 ReadM SNP 0008.scaffold00029 866719 1 G A - ReadM SNP 0008.scaffold00029 866853 1 G A - ReadM SNP 0008.scaffold00029 866929 1 T C - ReadM INDEL 0008.scaffold00029 867116 1 . A - ReadM SNP 0008.scaffold00029 867232 1 G A - ReadM SNP 0008.scaffold00029 867308 1 T C - ReadM SNP 0008.scaffold00029 867379 1 A G - ScafM SNP 0008.scaffold00029 867606 1 A G scaffold13954 ReadM SNP 0008.scaffold00029 867782 1 G A - ReadM SNP 0008.scaffold00029 867794 1 A G - ReadM SNP 0008.scaffold00029 867828 1 C T - ReadM SNP 0008.scaffold00029 868043 1 A C - ReadM SNP 0008.scaffold00029 868057 1 G A - ReadM SNP 0008.scaffold00029 868265 1 A G - ReadM SNP 0008.scaffold00029 868282 1 G A - ReadM SNP 0008.scaffold00029 868292 1 C G - ScafM SNP 0008.scaffold00029 868379 2 GA TG scaffold13954 ScafM SNP 0008.scaffold00029 869014 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 869349 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 869392 1 G A scaffold13954 ScafM INDEL 0008.scaffold00029 869545 1 T . scaffold13954 ScafM SNP 0008.scaffold00029 869548 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 869598 1 C G scaffold13954 Both SNP 0008.scaffold00029 869631 1 T A scaffold13954 Both SNP 0008.scaffold00029 870090 1 T C scaffold13954 Both INDEL 0008.scaffold00029 870226 2 .. CG scaffold13954 Both SNP 0008.scaffold00029 870348 1 C T scaffold13954 Both SNP 0008.scaffold00029 870442 1 A T scaffold13954 ScafM SNP 0008.scaffold00029 870460 2 TA AG scaffold13954 ScafM SNP 0008.scaffold00029 870558 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 870564 77 ............................................................................. CATTGTTCTGCTAGATCACATGAGAATAGTTCTTTAAGGAATAAATCTATGCCCTCGAAGCTTCGACCCCCAATTGC scaffold13954 ScafM SNP 0008.scaffold00029 870589 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 870618 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 870635 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 870644 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 870650 2 TG AA scaffold13954 ScafM SNP 0008.scaffold00029 870668 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 870672 1 C T scaffold13954 ScafM SNP 0008.scaffold00029 870695 1 G T scaffold13954 ScafM SNP 0008.scaffold00029 870700 1 T A scaffold13954 ScafM INDEL 0008.scaffold00029 870709 2 .. TT scaffold13954 ScafM SNP 0008.scaffold00029 870720 1 T G scaffold13954 ScafM SNP 0008.scaffold00029 870725 2 TG GC scaffold13954 ScafM SNP 0008.scaffold00029 870742 1 G A scaffold13954 ScafM SNP 0008.scaffold00029 870762 1 A T scaffold13954 ScafM SNP 0008.scaffold00029 870780 1 A G scaffold13954 ScafM SNP 0008.scaffold00029 870789 1 T C scaffold13954 ScafM SNP 0008.scaffold00029 870827 1 C A scaffold13954 ScafM INDEL 0008.scaffold00029 870850 1 A . scaffold13954 ScafM SNP 0008.scaffold00029 870852 2 GG TT scaffold13954 ScafM INDEL 0008.scaffold00029 870953 1 A . scaffold13954 ScafM INDEL 0008.scaffold00029 870977 2 TC .. scaffold13954 ScafM INDEL 0008.scaffold00029 871000 1 . C scaffold13954 Both INDEL 0008.scaffold00029 871030 1 A . scaffold13954 Both SNP 0008.scaffold00029 871385 1 T C scaffold13954 Both SNP 0008.scaffold00029 872414 1 A T scaffold13954 Both SNP 0008.scaffold00029 872475 1 G T scaffold13954 Both SNP 0008.scaffold00029 874727 1 T C scaffold13954 Both SNP 0008.scaffold00029 874820 1 G A scaffold13954 Both SNP 0008.scaffold00029 874915 1 T G scaffold13954 Both SNP 0008.scaffold00029 875696 1 C T scaffold13954 Both SNP 0008.scaffold00029 875705 1 G T scaffold13954 ScafM INDEL 0008.scaffold00029 875822 68 .................................................................... ATTATGCAGTAGGTCACTGGGAACAACCTTAATTTCTTGAATGTCATGCTTCACGAGTGACTAGTGGA scaffold13954 ScafM INDEL 0008.scaffold00029 875823 6 ...... GAACCA scaffold13954 Both INDEL 0008.scaffold00029 877376 3 GCC ... scaffold13954 ScafM INDEL 0008.scaffold00029 877504 4 .... TATA scaffold13954 ScafM INDEL 0008.scaffold00029 878008 60 ............................................................ GTTTCTGAATTTTAGTCGTCGCTGAAAACTGGATATGGAATATGGGGAAATTTAGTCTGT scaffold13954 Both SNP 0008.scaffold00029 878122 1 A G scaffold13954 Both SNP 0008.scaffold00029 878288 1 A T scaffold13954 ReadM SNP 0008.scaffold00029 878818 1 A G - Both SNP 0008.scaffold00029 878887 1 A G scaffold13954 ReadM SNP 0008.scaffold00029 879133 1 T C - ReadM SNP 0008.scaffold00029 879186 1 T G - ReadM SNP 0008.scaffold00029 879292 1 C T - ReadM SNP 0008.scaffold00029 879294 1 A G - Both SNP 0008.scaffold00029 880320 1 C A scaffold13954 ReadM SNP 0008.scaffold00029 880576 1 A G - ReadM SNP 0008.scaffold00029 880970 1 A T - Both SNP 0008.scaffold00029 881344 1 T C scaffold13954 Both SNP 0008.scaffold00029 881415 1 T A scaffold13954 ReadM SNP 0008.scaffold00029 881896 1 T C - ReadM SNP 0008.scaffold00029 881898 1 A G - ReadM SNP 0008.scaffold00029 881918 1 C T - Both SNP 0008.scaffold00029 882084 1 G A scaffold13954 ReadM SNP 0008.scaffold00029 882139 1 A G - ReadM SNP 0008.scaffold00029 883505 1 G T - Both SNP 0008.scaffold00029 883923 1 G A scaffold13954 Both SNP 0008.scaffold00029 884120 1 G A scaffold13954 ReadM SNP 0008.scaffold00029 884142 1 T A - ReadM SNP 0008.scaffold00029 884535 1 T C - ReadM SNP 0008.scaffold00029 884921 1 G A - ReadM SNP 0008.scaffold00029 885157 1 T C - ReadM INDEL 0008.scaffold00029 885577 1 A . - ReadM SNP 0008.scaffold00029 885623 1 C A - ReadM SNP 0008.scaffold00029 886269 1 A C - ReadM SNP 0008.scaffold00029 886313 1 A T - ReadM SNP 0008.scaffold00029 886883 1 C T - ReadM SNP 0008.scaffold00029 887119 1 A C - ReadM SNP 0008.scaffold00029 887246 1 T C - ReadM SNP 0008.scaffold00029 887732 1 A G - ReadM SNP 0008.scaffold00029 888002 1 A G - ReadM SNP 0008.scaffold00029 888428 1 A G - ReadM INDEL 0008.scaffold00029 888606 1 C . - ReadM SNP 0008.scaffold00029 888710 1 C T - ReadM SNP 0008.scaffold00029 888993 1 T C - ReadM SNP 0008.scaffold00029 889425 2 GA TC - Both SNP 0008.scaffold00029 890335 1 T A scaffold13954 ReadM INDEL 0008.scaffold00029 890513 1 . C - ReadM SNP 0008.scaffold00029 890673 1 A G - ReadM SNP 0008.scaffold00029 890739 1 C T - ScafM INDEL 0008.scaffold00029 891200 1 . T scaffold13954 ReadM INDEL 0008.scaffold00029 891206 1 . T - ScafM INDEL 0008.scaffold00029 891564 1 . T scaffold13954 ReadM INDEL 0008.scaffold00029 891589 1 . A - Both SNP 0008.scaffold00029 891634 1 A T scaffold13954 Both SNP 0008.scaffold00029 891668 1 T C scaffold13954 Both SNP 0008.scaffold00029 891762 1 C T scaffold13954 ReadM INDEL 0008.scaffold00029 891955 1 A . - ReadM SNP 0008.scaffold00029 892009 1 A C - Both SNP 0008.scaffold00029 893295 1 T C scaffold13954 ReadM SNP 0008.scaffold00029 893564 1 G A - Both SNP 0008.scaffold00029 894512 1 C G scaffold13954 ReadM SNP 0008.scaffold00029 894971 1 T G - ReadM SNP 0008.scaffold00029 894975 1 G A - ReadM SNP 0008.scaffold00029 895419 1 G A - ReadM SNP 0008.scaffold00029 895621 1 A G - ReadM SNP 0008.scaffold00029 895825 1 A G - ReadM SNP 0008.scaffold00029 896193 1 G A - Both SNP 0008.scaffold00029 896371 1 T C scaffold13954 Both SNP 0008.scaffold00029 896967 1 C T scaffold13954 Both SNP 0008.scaffold00029 897143 1 T C scaffold13954 Both SNP 0008.scaffold00029 898197 1 C T scaffold13954 ScafM INDEL 0008.scaffold00029 899131 18 AAAAAGAAAAGGGAAAAA ..............CCCC scaffold13954 Both SNP 0008.scaffold00029 899680 1 C T scaffold13954 Both SNP 0008.scaffold00029 899771 1 C T scaffold13954 ReadM SNP 0008.scaffold00029 901118 1 G T - ReadM SNP 0008.scaffold00029 901234 1 G A - ReadM SNP 0008.scaffold00029 901259 1 T C - ReadM SNP 0008.scaffold00029 901632 1 A G - ReadM SNP 0008.scaffold00029 901771 1 A G - ReadM SNP 0008.scaffold00029 902230 1 T A - ReadM INDEL 0008.scaffold00029 902548 1 T . - ReadM SNP 0008.scaffold00029 902682 1 T G - ReadM SNP 0008.scaffold00029 903084 1 A G - ReadM SNP 0008.scaffold00029 903109 1 G C - ReadM SNP 0008.scaffold00029 903138 1 G A - ReadM SNP 0008.scaffold00029 903657 1 C T - ReadM SNP 0008.scaffold00029 904874 1 C G - ReadM SNP 0008.scaffold00029 905001 1 T C - ReadM SNP 0008.scaffold00029 905356 1 G A - ReadM SNP 0008.scaffold00029 905522 1 A G - Both SNP 0008.scaffold00029 906701 1 T C scaffold13954 Both SNP 0008.scaffold00029 906703 1 C T scaffold13954 Both SNP 0008.scaffold00029 906933 1 G A scaffold13954 Both SNP 0008.scaffold00029 907044 1 G A scaffold13954 Both SNP 0008.scaffold00029 907191 1 C T scaffold13954 ReadM SNP 0008.scaffold00029 908366 1 G C - ReadM SNP 0008.scaffold00029 909457 1 T C - Both INDEL 0008.scaffold00029 909668 2 .. TT scaffold13954 Both SNP 0008.scaffold00029 909730 1 G A scaffold13954 ReadM SNP 0008.scaffold00029 909825 1 C T - ReadM SNP 0008.scaffold00029 909866 1 A G - Both SNP 0008.scaffold00029 910121 1 T C scaffold13954 ReadM SNP 0008.scaffold00029 910208 1 T G - ReadM SNP 0008.scaffold00029 911693 1 T G - ReadM SNP 0008.scaffold00029 911991 1 C T - ReadM SNP 0008.scaffold00029 912174 1 T C - ReadM SNP 0008.scaffold00029 912217 1 A G - ReadM SNP 0008.scaffold00029 912234 1 G A - Both INDEL 0008.scaffold00029 912373 2 TT .. scaffold8581 ReadM SNP 0008.scaffold00029 912784 1 G A - Both SNP 0008.scaffold00029 912922 1 A T scaffold8581 Both INDEL 0008.scaffold00029 913067 1 T . scaffold8581 Both INDEL 0008.scaffold00029 913274 2 AG .. scaffold8581 Both SNP 0008.scaffold00029 913318 1 T C scaffold8581 Both SNP 0008.scaffold00029 913394 1 T C scaffold8581 ScafM INDEL 0008.scaffold00029 913711 5 ..... TATTT scaffold8581 Both SNP 0008.scaffold00029 914263 1 C T scaffold8581 ScafM INDEL 0008.scaffold00029 914285 1 T . scaffold8581 Both SNP 0008.scaffold00029 914380 1 A G scaffold8581 Both SNP 0008.scaffold00029 914402 1 G A scaffold8581 Both SNP 0008.scaffold00029 914523 1 T A scaffold8581 ReadM INDEL 0008.scaffold00029 914982 2 .. TA - ScafM INDEL 0008.scaffold00029 914982 3 ..G TAT scaffold8581 ReadM SNP 0008.scaffold00029 915069 1 T C - ReadM SNP 0008.scaffold00029 915260 1 C T - ReadM INDEL 0008.scaffold00029 915365 1 T . - ReadM SNP 0008.scaffold00029 915376 1 G A - ReadM SNP 0008.scaffold00029 915492 1 T G - ReadM SNP 0008.scaffold00029 915572 1 G A - ReadM SNP 0008.scaffold00029 915605 1 G A - ReadM SNP 0008.scaffold00029 915656 1 C T - ReadM SNP 0008.scaffold00029 915809 1 A G - Both SNP 0008.scaffold00029 916118 1 A C scaffold8581 Both SNP 0008.scaffold00029 916136 1 T G scaffold8581 Both SNP 0008.scaffold00029 916484 1 G A scaffold8581 Both SNP 0008.scaffold00029 916497 1 G T scaffold8581 ScafM INDEL 0008.scaffold00029 916530 8 ........ AATATACA scaffold8581 ReadM SNP 0008.scaffold00029 916561 1 C A - ReadM SNP 0008.scaffold00029 916593 1 G A - ReadM INDEL 0008.scaffold00029 916762 1 . T - ReadM SNP 0008.scaffold00029 917286 1 G A - ReadM SNP 0008.scaffold00029 917306 1 C A - Both SNP 0008.scaffold00029 917397 1 C T scaffold8581 ReadM SNP 0008.scaffold00029 917807 1 T A - ReadM SNP 0008.scaffold00029 918150 1 T C - ReadM SNP 0008.scaffold00029 918242 1 C T - ReadM INDEL 0008.scaffold00029 918353 1 . G - ReadM SNP 0008.scaffold00029 918376 1 T C - ReadM SNP 0008.scaffold00029 918523 1 C T - Both SNP 0008.scaffold00029 919219 1 G T scaffold8581 Both SNP 0008.scaffold00029 919247 1 T G scaffold8581 Both SNP 0008.scaffold00029 919478 1 C T scaffold8581 ReadM SNP 0008.scaffold00029 919978 1 T C - ReadM SNP 0008.scaffold00029 919987 1 G C - Both SNP 0008.scaffold00029 921223 1 A G scaffold8581 Both INDEL 0008.scaffold00029 921292 3 ... CCA scaffold8581 ScafM INDEL 0008.scaffold00029 921568 1 . G scaffold8581 Both SNP 0008.scaffold00029 921811 1 C T scaffold8581 ScafM INDEL 0008.scaffold00029 922335 3 ACA ... scaffold8581 ScafM SNP 0008.scaffold00029 922377 1 G C scaffold8581 ScafM SNP 0008.scaffold00029 922382 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 922459 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 922463 2 TT GA scaffold8581 ScafM INDEL 0008.scaffold00029 922469 2 .A GT scaffold8581 ScafM SNP 0008.scaffold00029 922474 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 922476 2 CT TG scaffold8581 ScafM SNP 0008.scaffold00029 922479 2 CA GT scaffold8581 ScafM INDEL 0008.scaffold00029 922482 2 AC .. scaffold8581 ScafM SNP 0008.scaffold00029 922494 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 922532 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 922541 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 922546 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 922584 1 A C scaffold8581 ScafM SNP 0008.scaffold00029 922602 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 922662 1 G C scaffold8581 ScafM INDEL 0008.scaffold00029 922685 1 . T scaffold8581 ScafM SNP 0008.scaffold00029 922687 2 CT GG scaffold8581 ScafM SNP 0008.scaffold00029 922730 1 G T scaffold8581 ScafM SNP 0008.scaffold00029 922736 2 TC CT scaffold8581 ScafM SNP 0008.scaffold00029 922776 2 CT GA scaffold8581 ScafM SNP 0008.scaffold00029 922787 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 922801 1 C A scaffold8581 ScafM INDEL 0008.scaffold00029 922857 2 .. GA scaffold8581 ScafM SNP 0008.scaffold00029 922872 1 G C scaffold8581 ScafM SNP 0008.scaffold00029 922911 2 TT AA scaffold8581 Both SNP 0008.scaffold00029 922943 1 G A scaffold8581 Both SNP 0008.scaffold00029 922958 1 G A scaffold8581 Both SNP 0008.scaffold00029 923060 1 C T scaffold8581 Both SNP 0008.scaffold00029 923072 1 T A scaffold8581 Both SNP 0008.scaffold00029 923224 2 TT GC scaffold8581 ScafM SNP 0008.scaffold00029 923466 2 TG AA scaffold8581 ScafM INDEL 0008.scaffold00029 923491 3 ... GAA scaffold8581 ReadM SNP 0008.scaffold00029 923746 1 T C - ReadM SNP 0008.scaffold00029 923790 1 T C - ReadM INDEL 0008.scaffold00029 923797 1 G . - ReadM SNP 0008.scaffold00029 923848 1 A C - ReadM SNP 0008.scaffold00029 923872 1 A G - ReadM SNP 0008.scaffold00029 923903 1 T A - Both SNP 0008.scaffold00029 923933 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 923995 1 C T scaffold8581 ScafM INDEL 0008.scaffold00029 924003 13 ATTGACTAATGAA ............. scaffold8581 ScafM INDEL 0008.scaffold00029 924038 4 CCTT .... scaffold8581 ScafM SNP 0008.scaffold00029 924043 1 G A scaffold8581 ScafM INDEL 0008.scaffold00029 924062 1 . T scaffold8581 ScafM SNP 0008.scaffold00029 924064 1 G T scaffold8581 Both SNP 0008.scaffold00029 924138 1 G A scaffold8581 ScafM INDEL 0008.scaffold00029 924174 4 .... TCTA scaffold8581 ScafM INDEL 0008.scaffold00029 924190 2 TA .. scaffold8581 Both SNP 0008.scaffold00029 924260 1 T C scaffold8581 ScafM INDEL 0008.scaffold00029 924340 10 .......... CATGGTGTAG scaffold8581 ScafM SNP 0008.scaffold00029 924355 1 C T scaffold8581 Both INDEL 0008.scaffold00029 924554 1 . A scaffold8581 Both SNP 0008.scaffold00029 924669 1 A G scaffold8581 Both SNP 0008.scaffold00029 924689 1 C T scaffold8581 ReadM SNP 0008.scaffold00029 924881 1 A G - ReadM SNP 0008.scaffold00029 924885 1 A G - ReadM SNP 0008.scaffold00029 924938 1 T A - Both SNP 0008.scaffold00029 925107 1 A G scaffold8581 Both INDEL 0008.scaffold00029 925120 1 G . scaffold8581 Both SNP 0008.scaffold00029 925148 1 A T scaffold8581 Both SNP 0008.scaffold00029 925533 1 C T scaffold8581 ReadM SNP 0008.scaffold00029 925549 1 T G - ReadM SNP 0008.scaffold00029 925583 1 T C - ScafM SNP 0008.scaffold00029 925668 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 925826 1 A T scaffold8581 ScafM SNP 0008.scaffold00029 925835 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 925849 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 925861 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 926067 1 G A scaffold8581 ScafM INDEL 0008.scaffold00029 926078 1 G . scaffold8581 ScafM INDEL 0008.scaffold00029 926088 2 .. AT scaffold8581 Both SNP 0008.scaffold00029 926165 1 A T scaffold8581 Both SNP 0008.scaffold00029 926207 1 A C scaffold8581 Both SNP 0008.scaffold00029 926224 1 T C scaffold8581 Both SNP 0008.scaffold00029 926275 1 A T scaffold8581 ScafM INDEL 0008.scaffold00029 926286 1 A . scaffold8581 ScafM SNP 0008.scaffold00029 926318 1 A G scaffold8581 ScafM INDEL 0008.scaffold00029 926330 2 GC .. scaffold8581 ScafM SNP 0008.scaffold00029 926333 1 A C scaffold8581 ScafM SNP 0008.scaffold00029 926337 1 A T scaffold8581 ScafM SNP 0008.scaffold00029 926339 6 AAAAAA TTTTTT scaffold8581 ScafM INDEL 0008.scaffold00029 926374 1 A . scaffold8581 Both INDEL 0008.scaffold00029 926687 1 A . scaffold8581 Both SNP 0008.scaffold00029 926701 1 C T scaffold8581 Both SNP 0008.scaffold00029 926725 1 A G scaffold8581 Both SNP 0008.scaffold00029 927273 1 C T scaffold8581 Both SNP 0008.scaffold00029 927509 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 927754 1 G C scaffold8581 ScafM SNP 0008.scaffold00029 929295 1 C G scaffold8581 ScafM INDEL 0008.scaffold00029 929388 1 C . scaffold8581 ReadM INDEL 0008.scaffold00029 929560 2 AT .. - ScafM SNP 0008.scaffold00029 929968 1 A T scaffold8581 Both INDEL 0008.scaffold00029 930010 2 .. TT scaffold8581 ScafM SNP 0008.scaffold00029 930076 1 T C scaffold8581 ScafM INDEL 0008.scaffold00029 930114 1 . T scaffold8581 ScafM INDEL 0008.scaffold00029 930115 1 . A scaffold8581 ScafM SNP 0008.scaffold00029 930118 1 T G scaffold8581 Both SNP 0008.scaffold00029 930543 1 A G scaffold8581 Both INDEL 0008.scaffold00029 930561 1 . T scaffold8581 Both SNP 0008.scaffold00029 930574 1 C A scaffold8581 ScafM INDEL 0008.scaffold00029 931019 1 G . scaffold8581 ScafM SNP 0008.scaffold00029 931374 1 A T scaffold8581 ReadM SNP 0008.scaffold00029 931504 1 C T - ReadM SNP 0008.scaffold00029 931718 1 A G - ReadM SNP 0008.scaffold00029 931763 1 A G - Both INDEL 0008.scaffold00029 931820 1 . A scaffold8581 ReadM SNP 0008.scaffold00029 932633 1 C T - Both SNP 0008.scaffold00029 933128 1 C G scaffold8581 Both SNP 0008.scaffold00029 933597 1 T C scaffold8581 Both SNP 0008.scaffold00029 933634 1 G A scaffold8581 Both SNP 0008.scaffold00029 933766 1 A C scaffold8581 ScafM INDEL 0008.scaffold00029 933800 14 AGCTACTGTAACTG .............. scaffold8581 ScafM INDEL 0008.scaffold00029 933816 1 G . scaffold8581 ScafM INDEL 0008.scaffold00029 934046 16 ACTTTCCTATTGCTAT ................ scaffold8581 ScafM SNP 0008.scaffold00029 936156 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 936628 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 936860 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 936994 1 A C scaffold8581 Both SNP 0008.scaffold00029 937344 1 T C scaffold8581 Both SNP 0008.scaffold00029 937407 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 941257 1 C T scaffold11084 ScafM SNP 0008.scaffold00029 941413 1 T A scaffold11084 ScafM SNP 0008.scaffold00029 941516 1 A G scaffold11084 ScafM SNP 0008.scaffold00029 941653 1 T C scaffold11084 ScafM INDEL 0008.scaffold00029 945176 8 ........ TAGTTCCA scaffold11084 ScafM SNP 0008.scaffold00029 945369 1 A T scaffold11084 ScafM INDEL 0008.scaffold00029 945379 4 GCAA .... scaffold11084 ScafM SNP 0008.scaffold00029 945435 1 A G scaffold11084 Both SNP 0008.scaffold00029 945448 1 C T scaffold11084 ScafM SNP 0008.scaffold00029 945485 1 C T scaffold11084 ScafM SNP 0008.scaffold00029 945659 1 C G scaffold11084 ScafM SNP 0008.scaffold00029 945677 1 G A scaffold11084 ScafM SNP 0008.scaffold00029 945740 1 G C scaffold11084 ScafM SNP 0008.scaffold00029 945747 1 C G scaffold11084 ScafM SNP 0008.scaffold00029 945809 1 A G scaffold11084 ScafM SNP 0008.scaffold00029 945823 1 G A scaffold11084 ScafM SNP 0008.scaffold00029 945844 1 C T scaffold11084 ScafM SNP 0008.scaffold00029 945848 1 C G scaffold11084 ScafM SNP 0008.scaffold00029 945879 1 T A scaffold11084 ScafM INDEL 0008.scaffold00029 950006 1 . A scaffold14811 ReadM SNP 0008.scaffold00029 955985 1 T C - ReadM INDEL 0008.scaffold00029 956315 1 T . - ReadM SNP 0008.scaffold00029 956467 1 C T - ReadM SNP 0008.scaffold00029 956842 1 T C - ReadM SNP 0008.scaffold00029 957063 1 A T - ReadM SNP 0008.scaffold00029 957198 1 G A - ReadM SNP 0008.scaffold00029 957610 1 G A - ReadM SNP 0008.scaffold00029 958351 1 C A - ReadM SNP 0008.scaffold00029 959805 1 A G - ReadM SNP 0008.scaffold00029 960020 1 T C - ReadM SNP 0008.scaffold00029 960886 1 T G - ReadM INDEL 0008.scaffold00029 960997 3 ... CCT - ReadM SNP 0008.scaffold00029 961351 1 T A - ReadM SNP 0008.scaffold00029 961822 1 G A - ReadM SNP 0008.scaffold00029 961839 1 A T - ScafM SNP 0008.scaffold00029 966068 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 966096 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 966380 1 T A scaffold8581 Both SNP 0008.scaffold00029 967662 1 G C scaffold8581 ScafM INDEL 0008.scaffold00029 967691 1 . T scaffold8581 ScafM SNP 0008.scaffold00029 968106 1 G C scaffold8581 ScafM SNP 0008.scaffold00029 968360 1 A T scaffold8581 ReadM SNP 0008.scaffold00029 969300 1 C T - ReadM SNP 0008.scaffold00029 969528 1 C T - ReadM SNP 0008.scaffold00029 970129 1 G A - ReadM SNP 0008.scaffold00029 970654 1 T A - ReadM SNP 0008.scaffold00029 971018 1 T C - ReadM SNP 0008.scaffold00029 971038 1 A G - ReadM SNP 0008.scaffold00029 971551 1 G A - ReadM SNP 0008.scaffold00029 972018 1 G A - ReadM SNP 0008.scaffold00029 972367 1 G A - ReadM SNP 0008.scaffold00029 972436 1 G A - Both SNP 0008.scaffold00029 973126 1 A G scaffold8581 ReadM SNP 0008.scaffold00029 973218 1 C T - ReadM SNP 0008.scaffold00029 973411 1 A C - Both SNP 0008.scaffold00029 973752 1 C T scaffold8581 ReadM SNP 0008.scaffold00029 973878 1 C T - ReadM INDEL 0008.scaffold00029 974823 1 C . - ReadM SNP 0008.scaffold00029 974836 1 C A - ReadM SNP 0008.scaffold00029 976019 1 G A - ReadM SNP 0008.scaffold00029 976513 1 T C - ReadM INDEL 0008.scaffold00029 976592 1 T . - ReadM SNP 0008.scaffold00029 976611 1 C T - ReadM SNP 0008.scaffold00029 977082 1 G A - ReadM SNP 0008.scaffold00029 977177 1 G A - ReadM SNP 0008.scaffold00029 977401 1 G A - ReadM SNP 0008.scaffold00029 977515 1 T C - ReadM SNP 0008.scaffold00029 977576 1 C G - ScafM SNP 0008.scaffold00029 978211 1 A T scaffold8581 ReadM SNP 0008.scaffold00029 980716 1 T C - ScafM SNP 0008.scaffold00029 983011 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 983637 1 A C scaffold8581 ScafM INDEL 0008.scaffold00029 983898 1 . A scaffold8581 Both SNP 0008.scaffold00029 984545 1 A C scaffold8581 Both SNP 0008.scaffold00029 984555 1 G A scaffold8581 ReadM SNP 0008.scaffold00029 987740 1 C A - ReadM SNP 0008.scaffold00029 987841 1 C T - ReadM SNP 0008.scaffold00029 988063 1 T C - ReadM SNP 0008.scaffold00029 988373 1 C A - ReadM SNP 0008.scaffold00029 988583 1 A G - ReadM SNP 0008.scaffold00029 989172 1 T C - ReadM SNP 0008.scaffold00029 989379 1 T C - ReadM SNP 0008.scaffold00029 989447 1 T G - ReadM INDEL 0008.scaffold00029 989586 1 A . - ReadM SNP 0008.scaffold00029 989609 1 C A - ReadM SNP 0008.scaffold00029 990266 1 T C - ReadM SNP 0008.scaffold00029 990275 1 C A - ReadM SNP 0008.scaffold00029 992717 1 T C - ReadM SNP 0008.scaffold00029 993128 1 A C - ReadM SNP 0008.scaffold00029 993207 1 A G - ReadM SNP 0008.scaffold00029 993671 1 A G - ReadM SNP 0008.scaffold00029 995158 1 A C - ReadM SNP 0008.scaffold00029 995278 1 A C - ReadM SNP 0008.scaffold00029 995608 1 T G - ReadM SNP 0008.scaffold00029 995688 1 G A - ReadM SNP 0008.scaffold00029 996004 1 T C - ReadM SNP 0008.scaffold00029 996264 1 T A - ReadM SNP 0008.scaffold00029 996319 1 A G - ReadM SNP 0008.scaffold00029 996733 1 A G - ReadM SNP 0008.scaffold00029 997052 1 T C - ScafM SNP 0008.scaffold00029 998059 1 A T scaffold8581 Both SNP 0008.scaffold00029 998347 1 A G scaffold8581 ReadM SNP 0008.scaffold00029 999480 1 A G - ReadM SNP 0008.scaffold00029 1000040 1 T C - ReadM SNP 0008.scaffold00029 1000500 1 G A - ScafM SNP 0008.scaffold00029 1001009 1 G T scaffold8581 ReadM SNP 0008.scaffold00029 1002206 1 T C - ReadM SNP 0008.scaffold00029 1002562 1 G A - ReadM SNP 0008.scaffold00029 1002780 1 A G - ScafM SNP 0008.scaffold00029 1003249 2 CA AT scaffold8581 ReadM SNP 0008.scaffold00029 1005750 1 T A - ReadM SNP 0008.scaffold00029 1005771 1 T A - ScafM SNP 0008.scaffold00029 1008800 1 T C scaffold8581 Both SNP 0008.scaffold00029 1009145 1 A C scaffold8581 Both SNP 0008.scaffold00029 1009326 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1009401 4 CGAA TTTT scaffold8581 ScafM SNP 0008.scaffold00029 1009406 8 GAGACACA TTTTTTTT scaffold8581 Both SNP 0008.scaffold00029 1010362 1 C G scaffold8581 Both SNP 0008.scaffold00029 1010433 1 T A scaffold8581 Both SNP 0008.scaffold00029 1011362 1 T C scaffold8581 Both SNP 0008.scaffold00029 1011597 1 A G scaffold8581 Both SNP 0008.scaffold00029 1012146 1 G T scaffold8581 Both SNP 0008.scaffold00029 1012419 1 T G scaffold8581 Both INDEL 0008.scaffold00029 1012653 1 . T scaffold8581 ScafM INDEL 0008.scaffold00029 1012794 5 CTCAT ..... scaffold8581 ScafM INDEL 0008.scaffold00029 1012835 1 . T scaffold8581 Both SNP 0008.scaffold00029 1013034 1 T C scaffold8581 Both SNP 0008.scaffold00029 1013215 1 C T scaffold8581 Both SNP 0008.scaffold00029 1013233 1 A G scaffold8581 ReadM SNP 0008.scaffold00029 1013401 1 T G - ReadM INDEL 0008.scaffold00029 1013564 3 ... TGT - ReadM INDEL 0008.scaffold00029 1013607 3 TGT ... - ScafM SNP 0008.scaffold00029 1013608 1 G T scaffold8581 ScafM INDEL 0008.scaffold00029 1013609 1 . G scaffold8581 Both SNP 0008.scaffold00029 1013719 1 G A scaffold8581 Both SNP 0008.scaffold00029 1013761 1 T G scaffold8581 Both SNP 0008.scaffold00029 1013767 1 A T scaffold8581 ScafM INDEL 0008.scaffold00029 1013965 3 AGG ... scaffold8581 ScafM SNP 0008.scaffold00029 1013970 1 A G scaffold8581 Both SNP 0008.scaffold00029 1014311 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 1014336 1 A G scaffold8581 ScafM INDEL 0008.scaffold00029 1014341 2 TA .. scaffold8581 ScafM SNP 0008.scaffold00029 1014349 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1014359 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014378 1 A T scaffold8581 ScafM SNP 0008.scaffold00029 1014387 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 1014391 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 1014398 1 T A scaffold8581 Both SNP 0008.scaffold00029 1014502 1 C A scaffold8581 Both INDEL 0008.scaffold00029 1014515 1 . A scaffold8581 Both SNP 0008.scaffold00029 1014701 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014751 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 1014760 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014834 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1014846 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014883 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014891 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 1014910 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014929 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1014955 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 1014963 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1014981 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1014988 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 1015019 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015062 1 A C scaffold8581 ScafM SNP 0008.scaffold00029 1015074 1 A T scaffold8581 ScafM INDEL 0008.scaffold00029 1015082 1 C . scaffold8581 ScafM SNP 0008.scaffold00029 1015088 1 G C scaffold8581 ScafM SNP 0008.scaffold00029 1015093 1 C T scaffold8581 ScafM SNP 0008.scaffold00029 1015105 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015118 1 A T scaffold8581 ScafM SNP 0008.scaffold00029 1015188 2 CA TG scaffold8581 ScafM SNP 0008.scaffold00029 1015203 2 CG AA scaffold8581 ScafM SNP 0008.scaffold00029 1015213 1 T C scaffold8581 ScafM INDEL 0008.scaffold00029 1015220 1 A . scaffold8581 ScafM SNP 0008.scaffold00029 1015282 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015291 1 C T scaffold8581 ScafM INDEL 0008.scaffold00029 1015296 4 TTTA .... scaffold8581 ScafM INDEL 0008.scaffold00029 1015313 3 CCC ... scaffold8581 ScafM SNP 0008.scaffold00029 1015319 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 1015324 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015327 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015340 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1015344 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1015439 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 1015456 1 G A scaffold8581 ScafM INDEL 0008.scaffold00029 1015492 1 G . scaffold8581 ScafM SNP 0008.scaffold00029 1015508 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015520 1 G A scaffold8581 ScafM INDEL 0008.scaffold00029 1015526 1 . C scaffold8581 ScafM SNP 0008.scaffold00029 1015531 1 G T scaffold8581 ScafM SNP 0008.scaffold00029 1015557 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015580 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1015634 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015639 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015648 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1015654 1 C A scaffold8581 ScafM SNP 0008.scaffold00029 1015659 1 G T scaffold8581 ScafM SNP 0008.scaffold00029 1015683 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015885 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 1015905 1 T C scaffold8581 ScafM INDEL 0008.scaffold00029 1015931 1 . A scaffold8581 ScafM SNP 0008.scaffold00029 1015956 2 TG CA scaffold8581 ScafM SNP 0008.scaffold00029 1015967 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1015971 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1015985 1 T G scaffold8581 ScafM SNP 0008.scaffold00029 1016012 1 T A scaffold8581 ScafM SNP 0008.scaffold00029 1016019 1 G A scaffold8581 ScafM SNP 0008.scaffold00029 1016026 1 T G scaffold8581 ScafM INDEL 0008.scaffold00029 1017037 2 .. AA scaffold8581 ScafM SNP 0008.scaffold00029 1017049 1 A C scaffold8581 ScafM SNP 0008.scaffold00029 1017051 1 A C scaffold8581 ScafM SNP 0008.scaffold00029 1017057 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1017096 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1017098 1 A G scaffold8581 ScafM SNP 0008.scaffold00029 1017105 1 T C scaffold8581 Both SNP 0008.scaffold00029 1017513 1 G A scaffold8581 Both SNP 0008.scaffold00029 1017547 1 T A scaffold8581 Both SNP 0008.scaffold00029 1017567 1 T A scaffold8581 ScafM INDEL 0008.scaffold00029 1017733 14 GGTCAAGACTAGCT .............. scaffold8581 ScafM INDEL 0008.scaffold00029 1017748 4 AATA .... scaffold8581 ScafM INDEL 0008.scaffold00029 1017753 1 T . scaffold8581 ScafM SNP 0008.scaffold00029 1017767 1 T A scaffold8581 Both SNP 0008.scaffold00029 1017815 1 G T scaffold8581 ScafM INDEL 0008.scaffold00029 1017820 1 . T scaffold8581 ReadM INDEL 0008.scaffold00029 1017852 1 . G - Both SNP 0008.scaffold00029 1017906 1 T C scaffold8581 Both SNP 0008.scaffold00029 1017912 1 T C scaffold8581 Both SNP 0008.scaffold00029 1017963 1 G A scaffold8581 Both SNP 0008.scaffold00029 1017981 1 T A scaffold8581 Both SNP 0008.scaffold00029 1017983 1 C G scaffold8581 Both SNP 0008.scaffold00029 1018010 1 G C scaffold8581 Both SNP 0008.scaffold00029 1018140 1 C G scaffold8581 ScafM SNP 0008.scaffold00029 1018427 1 A T scaffold8581 ScafM INDEL 0008.scaffold00029 1018596 4 ATAT .... scaffold8581 ScafM SNP 0008.scaffold00029 1018601 1 T C scaffold8581 ScafM SNP 0008.scaffold00029 1018604 1 A C scaffold8581 ScafM INDEL 0008.scaffold00029 1018636 1 . G scaffold8581 ScafM SNP 0008.scaffold00029 1018640 1 G A scaffold8581 ReadM SNP 0008.scaffold00029 1030849 1 C T - ReadM SNP 0008.scaffold00029 1030852 1 G A - ReadM SNP 0008.scaffold00029 1031021 1 G T - ReadM SNP 0008.scaffold00029 1031220 1 G A - ReadM INDEL 0008.scaffold00029 1031240 1 . C - ReadM SNP 0008.scaffold00029 1031256 1 G C - ReadM SNP 0008.scaffold00029 1031479 1 G A - ReadM SNP 0008.scaffold00029 1031511 1 A G - ReadM SNP 0008.scaffold00029 1032580 1 T C - ScafM SNP 0008.scaffold00029 1047033 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1047095 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1047108 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1047126 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1047138 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1047157 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1047205 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1047207 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1047239 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1047244 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1047257 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1047261 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1047270 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1047279 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1047310 2 AG .C scaffold12090 ScafM SNP 0008.scaffold00029 1047496 1 G A scaffold8830 ScafM SNP 0008.scaffold00029 1047499 2 AT CG scaffold8830 ScafM SNP 0008.scaffold00029 1047508 2 CG TT scaffold8830 ScafM SNP 0008.scaffold00029 1047512 1 C T scaffold8830 ScafM INDEL 0008.scaffold00029 1047518 1 . A scaffold8830 ScafM INDEL 0008.scaffold00029 1047523 2 .. AC scaffold8830 ScafM SNP 0008.scaffold00029 1047526 2 AT CC scaffold8830 ScafM SNP 0008.scaffold00029 1047535 1 C T scaffold8830 ScafM SNP 0008.scaffold00029 1047540 1 T C scaffold8830 ScafM INDEL 0008.scaffold00029 1047545 2 TC .A scaffold8830 ScafM SNP 0008.scaffold00029 1047550 1 C A scaffold8830 ScafM SNP 0008.scaffold00029 1047553 1 A G scaffold8830 ScafM INDEL 0008.scaffold00029 1047558 1 A . scaffold8830 ScafM SNP 0008.scaffold00029 1047563 1 T A scaffold8830 ScafM SNP 0008.scaffold00029 1047579 1 T C scaffold8830 ScafM INDEL 0008.scaffold00029 1047580 5 ..... ATTCT scaffold8830 ScafM SNP 0008.scaffold00029 1047585 1 G A scaffold8830 ScafM INDEL 0008.scaffold00029 1047594 1 G . scaffold8830 ScafM SNP 0008.scaffold00029 1047596 3 GAC CTA scaffold8830 ScafM SNP 0008.scaffold00029 1047630 1 G A scaffold8830 ScafM SNP 0008.scaffold00029 1047635 2 TA CC scaffold8830 ScafM SNP 0008.scaffold00029 1047639 2 AA CC scaffold8830 ScafM SNP 0008.scaffold00029 1047642 2 TA CG scaffold8830 ScafM SNP 0008.scaffold00029 1047649 1 G A scaffold8830 ScafM INDEL 0008.scaffold00029 1047662 1 T . scaffold8830 ScafM INDEL 0008.scaffold00029 1047668 1 . A scaffold8830 ScafM SNP 0008.scaffold00029 1047670 1 C A scaffold8830 ScafM SNP 0008.scaffold00029 1047677 1 G A scaffold8830 ScafM SNP 0008.scaffold00029 1047688 1 T G scaffold8830 ScafM SNP 0008.scaffold00029 1047698 1 G A scaffold8830 ScafM INDEL 0008.scaffold00029 1047699 1 . C scaffold8830 ScafM INDEL 0008.scaffold00029 1047702 3 TTT .GA scaffold8830 ScafM SNP 0008.scaffold00029 1047709 1 C T scaffold8830 ScafM SNP 0008.scaffold00029 1047724 1 C T scaffold8830 ScafM SNP 0008.scaffold00029 1047727 1 T C scaffold8830 ScafM SNP 0008.scaffold00029 1047783 1 T G scaffold8830 ScafM SNP 0008.scaffold00029 1048752 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1048753 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1048810 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1048817 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1048824 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1048826 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1048867 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1048899 2 TA .G scaffold12090 ScafM INDEL 0008.scaffold00029 1048904 7 AGTAATA ....... scaffold12090 ScafM SNP 0008.scaffold00029 1049354 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1049357 1 G C scaffold12090 ScafM INDEL 0008.scaffold00029 1049394 3 ... AAT scaffold12090 ScafM SNP 0008.scaffold00029 1049488 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1049547 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1049578 1 T G scaffold12090 ScafM INDEL 0008.scaffold00029 1049579 2 .. CA scaffold12090 ScafM SNP 0008.scaffold00029 1049903 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1049908 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1049911 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1049918 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1049927 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1049935 1 G T scaffold12090 ScafM INDEL 0008.scaffold00029 1049941 4 ATAT .... scaffold12090 ScafM SNP 0008.scaffold00029 1049947 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1049953 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1049973 1 G T scaffold12090 Both SNP 0008.scaffold00029 1050165 1 A T scaffold12090 Both INDEL 0008.scaffold00029 1050190 2 TT .. scaffold12090 ScafM SNP 0008.scaffold00029 1050255 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1050288 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1050311 1 A T scaffold12090 ScafM INDEL 0008.scaffold00029 1050387 12 ............ TCTCTCTCTCTC scaffold12090 Both INDEL 0008.scaffold00029 1050583 1 . A scaffold12090 Both SNP 0008.scaffold00029 1050625 1 A T scaffold12090 Both SNP 0008.scaffold00029 1050669 1 A G scaffold12090 Both SNP 0008.scaffold00029 1050845 1 C G scaffold12090 Both SNP 0008.scaffold00029 1050948 1 G A scaffold12090 Both SNP 0008.scaffold00029 1050967 1 T C scaffold12090 Both SNP 0008.scaffold00029 1050988 1 A G scaffold12090 Both SNP 0008.scaffold00029 1051067 1 G A scaffold12090 Both SNP 0008.scaffold00029 1051076 1 A C scaffold12090 Both SNP 0008.scaffold00029 1051113 1 A T scaffold12090 Both INDEL 0008.scaffold00029 1051221 1 T . scaffold12090 Both SNP 0008.scaffold00029 1051299 1 T A scaffold12090 Both SNP 0008.scaffold00029 1051372 1 A G scaffold12090 Both SNP 0008.scaffold00029 1051397 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1051416 1 A T scaffold12090 ScafM INDEL 0008.scaffold00029 1051435 7 CTCTTTC ....... scaffold12090 ReadM SNP 0008.scaffold00029 1051499 1 T C - ReadM SNP 0008.scaffold00029 1051546 1 C G - ReadM SNP 0008.scaffold00029 1051603 1 T C - ReadM SNP 0008.scaffold00029 1051619 1 T A - ReadM SNP 0008.scaffold00029 1051639 1 T C - ReadM SNP 0008.scaffold00029 1051754 1 C A - ReadM SNP 0008.scaffold00029 1051808 1 G A - ReadM SNP 0008.scaffold00029 1051813 1 T A - ReadM SNP 0008.scaffold00029 1051851 1 T C - ReadM SNP 0008.scaffold00029 1051859 1 C T - ReadM SNP 0008.scaffold00029 1051888 1 T C - ReadM SNP 0008.scaffold00029 1051953 1 G A - ReadM SNP 0008.scaffold00029 1051991 1 A G - ReadM SNP 0008.scaffold00029 1052059 1 A G - ReadM SNP 0008.scaffold00029 1052078 1 G A - ReadM SNP 0008.scaffold00029 1052143 1 G T - ReadM SNP 0008.scaffold00029 1052152 1 C T - ReadM INDEL 0008.scaffold00029 1052220 1 . C - ReadM SNP 0008.scaffold00029 1052231 1 T G - ReadM SNP 0008.scaffold00029 1052380 1 T A - ReadM SNP 0008.scaffold00029 1052495 1 T C - ReadM SNP 0008.scaffold00029 1052541 1 G C - ReadM SNP 0008.scaffold00029 1052672 1 A C - ReadM INDEL 0008.scaffold00029 1052705 1 . T - ReadM SNP 0008.scaffold00029 1052733 1 C A - ReadM SNP 0008.scaffold00029 1052744 1 G A - ReadM INDEL 0008.scaffold00029 1052824 2 .. AA - ReadM SNP 0008.scaffold00029 1052924 1 G A - ReadM SNP 0008.scaffold00029 1052954 1 C A - ReadM SNP 0008.scaffold00029 1053047 1 T C - ReadM SNP 0008.scaffold00029 1053094 1 C A - ReadM SNP 0008.scaffold00029 1053100 1 A G - ReadM SNP 0008.scaffold00029 1053331 1 A G - ReadM SNP 0008.scaffold00029 1053377 1 C A - ReadM SNP 0008.scaffold00029 1053478 1 A G - ReadM SNP 0008.scaffold00029 1053551 1 C T - ReadM SNP 0008.scaffold00029 1053657 1 C T - ReadM SNP 0008.scaffold00029 1053709 1 A G - ReadM SNP 0008.scaffold00029 1053724 1 T C - ScafM INDEL 0008.scaffold00029 1053933 1 A . scaffold12090 ScafM INDEL 0008.scaffold00029 1053975 4 ...A CTGT scaffold12090 ReadM SNP 0008.scaffold00029 1054016 1 G T - ReadM SNP 0008.scaffold00029 1054066 1 G C - ReadM SNP 0008.scaffold00029 1054070 1 G A - ReadM SNP 0008.scaffold00029 1054187 1 T G - ReadM SNP 0008.scaffold00029 1054257 1 A G - ReadM SNP 0008.scaffold00029 1054279 1 C T - ReadM SNP 0008.scaffold00029 1054312 1 A C - ReadM SNP 0008.scaffold00029 1054363 1 A G - ReadM SNP 0008.scaffold00029 1054409 1 G A - ReadM SNP 0008.scaffold00029 1054521 1 A C - ReadM SNP 0008.scaffold00029 1054563 1 C G - ScafM SNP 0008.scaffold00029 1054890 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1054908 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1054924 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1054927 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1055067 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1055109 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1055111 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1055119 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1055126 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1055135 1 . A scaffold12090 ScafM SNP 0008.scaffold00029 1055186 2 TG AT scaffold12090 ScafM SNP 0008.scaffold00029 1055205 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1055250 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1055283 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1055287 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1055293 1 C T scaffold12090 Both SNP 0008.scaffold00029 1055314 1 G A scaffold12090 Both SNP 0008.scaffold00029 1055346 1 C T scaffold12090 Both SNP 0008.scaffold00029 1055383 1 G A scaffold12090 Both SNP 0008.scaffold00029 1055485 1 A G scaffold12090 Both SNP 0008.scaffold00029 1055488 1 A C scaffold12090 Both SNP 0008.scaffold00029 1055565 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1055598 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1055601 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1055603 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1055619 2 GT TG scaffold12090 Both SNP 0008.scaffold00029 1055674 1 G A scaffold12090 Both SNP 0008.scaffold00029 1055696 1 C T scaffold12090 Both SNP 0008.scaffold00029 1055729 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1055766 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1055775 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1055780 2 CT TC scaffold12090 ScafM SNP 0008.scaffold00029 1055783 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1055800 2 GG .. scaffold12090 ReadM SNP 0008.scaffold00029 1055845 1 C A - ReadM SNP 0008.scaffold00029 1055960 1 T C - ReadM INDEL 0008.scaffold00029 1056175 1 . T - ReadM SNP 0008.scaffold00029 1056187 1 T G - ReadM SNP 0008.scaffold00029 1056245 1 A C - ReadM INDEL 0008.scaffold00029 1056375 1 G . - ReadM SNP 0008.scaffold00029 1056396 1 T C - ReadM SNP 0008.scaffold00029 1056480 1 T C - ReadM SNP 0008.scaffold00029 1056575 1 G A - ReadM SNP 0008.scaffold00029 1056589 1 G A - ReadM SNP 0008.scaffold00029 1056592 1 G A - ReadM SNP 0008.scaffold00029 1056735 1 T C - ReadM SNP 0008.scaffold00029 1056759 1 G C - ReadM SNP 0008.scaffold00029 1056845 1 T C - ReadM SNP 0008.scaffold00029 1056960 1 C G - ReadM SNP 0008.scaffold00029 1057042 1 C G - ReadM SNP 0008.scaffold00029 1057116 1 A T - ReadM SNP 0008.scaffold00029 1057135 1 G T - ReadM SNP 0008.scaffold00029 1057141 1 G C - ReadM SNP 0008.scaffold00029 1057194 1 C G - ReadM SNP 0008.scaffold00029 1057205 1 G A - Both SNP 0008.scaffold00029 1057314 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1057335 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1057342 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1057348 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1057386 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1057388 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1057399 1 G T scaffold12090 Both SNP 0008.scaffold00029 1057447 1 A C scaffold12090 ReadM SNP 0008.scaffold00029 1057554 1 T G - ReadM SNP 0008.scaffold00029 1057593 1 C G - ScafM SNP 0008.scaffold00029 1057625 1 T C scaffold12090 Both SNP 0008.scaffold00029 1057640 1 T G scaffold12090 ReadM SNP 0008.scaffold00029 1057909 1 T A - ScafM SNP 0008.scaffold00029 1059962 1 A T scaffold12090 ScafM INDEL 0008.scaffold00029 1059994 2 GA .. scaffold12090 ScafM INDEL 0008.scaffold00029 1060058 6 ...... CATTGG scaffold12090 ScafM SNP 0008.scaffold00029 1060105 1 T C scaffold12090 Both SNP 0008.scaffold00029 1060491 1 T A scaffold12090 Both SNP 0008.scaffold00029 1060750 1 A G scaffold12090 Both INDEL 0008.scaffold00029 1060903 1 T . scaffold12090 ScafM INDEL 0008.scaffold00029 1061122 1 . A scaffold12090 Both SNP 0008.scaffold00029 1061349 1 G A scaffold12090 Both SNP 0008.scaffold00029 1061419 1 T C scaffold12090 Both SNP 0008.scaffold00029 1061480 1 C T scaffold12090 Both SNP 0008.scaffold00029 1061529 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1062284 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1062428 1 A . scaffold12090 ScafM SNP 0008.scaffold00029 1062450 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1062510 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1062519 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1062522 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1062528 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1062535 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1062555 1 G T scaffold12090 Both SNP 0008.scaffold00029 1062591 1 T G scaffold12090 Both SNP 0008.scaffold00029 1062653 1 T C scaffold12090 Both SNP 0008.scaffold00029 1062760 1 C T scaffold12090 Both SNP 0008.scaffold00029 1062764 1 C T scaffold12090 Both SNP 0008.scaffold00029 1062832 1 T G scaffold12090 Both SNP 0008.scaffold00029 1062886 1 A G scaffold12090 Both SNP 0008.scaffold00029 1063165 1 G C scaffold12090 Both SNP 0008.scaffold00029 1063403 1 C A scaffold12090 Both SNP 0008.scaffold00029 1063406 1 G A scaffold12090 Both SNP 0008.scaffold00029 1063419 1 A G scaffold12090 Both SNP 0008.scaffold00029 1063446 1 C T scaffold12090 ReadM SNP 0008.scaffold00029 1063498 1 A T - ReadM SNP 0008.scaffold00029 1063612 1 G C - ReadM SNP 0008.scaffold00029 1063622 1 G A - ReadM SNP 0008.scaffold00029 1063678 1 G T - ReadM SNP 0008.scaffold00029 1063767 1 T A - ReadM SNP 0008.scaffold00029 1063792 1 A T - ReadM SNP 0008.scaffold00029 1063808 1 T A - ReadM SNP 0008.scaffold00029 1063891 1 T G - ReadM SNP 0008.scaffold00029 1064071 1 T A - ReadM SNP 0008.scaffold00029 1064079 1 G T - ReadM SNP 0008.scaffold00029 1064132 1 A T - ReadM SNP 0008.scaffold00029 1064333 1 T C - ReadM SNP 0008.scaffold00029 1064388 1 A G - ReadM SNP 0008.scaffold00029 1064440 1 G T - ReadM SNP 0008.scaffold00029 1064507 1 C T - ReadM SNP 0008.scaffold00029 1064626 1 A G - ReadM SNP 0008.scaffold00029 1064643 1 C T - ReadM INDEL 0008.scaffold00029 1064668 1 . A - ReadM SNP 0008.scaffold00029 1064779 1 G A - ReadM SNP 0008.scaffold00029 1064836 1 G A - ReadM SNP 0008.scaffold00029 1064942 1 T C - ReadM SNP 0008.scaffold00029 1065000 1 C T - ReadM SNP 0008.scaffold00029 1065025 1 G A - ReadM SNP 0008.scaffold00029 1065056 1 C T - ReadM SNP 0008.scaffold00029 1065476 1 G A - ReadM SNP 0008.scaffold00029 1065658 1 A G - ReadM SNP 0008.scaffold00029 1065765 1 G A - ReadM SNP 0008.scaffold00029 1065770 1 T C - Both SNP 0008.scaffold00029 1065911 1 G A scaffold12090 Both SNP 0008.scaffold00029 1065919 1 G A scaffold12090 Both SNP 0008.scaffold00029 1065929 1 C T scaffold12090 Both SNP 0008.scaffold00029 1065978 1 T G scaffold12090 Both SNP 0008.scaffold00029 1066000 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1066041 2 TT AA scaffold12090 ScafM SNP 0008.scaffold00029 1066050 1 C T scaffold12090 Both SNP 0008.scaffold00029 1066077 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1066162 1 G A scaffold12090 Both SNP 0008.scaffold00029 1066245 1 C T scaffold12090 Both SNP 0008.scaffold00029 1066333 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1066566 5 ..... TAGCT scaffold12090 ScafM SNP 0008.scaffold00029 1066610 1 A G scaffold12090 ReadM INDEL 0008.scaffold00029 1066690 2 .. AA - ReadM SNP 0008.scaffold00029 1066792 1 T C - ReadM SNP 0008.scaffold00029 1066813 1 T A - Both SNP 0008.scaffold00029 1067080 1 C T scaffold12090 ReadM SNP 0008.scaffold00029 1068982 1 T C - ReadM SNP 0008.scaffold00029 1069391 1 A T - ReadM SNP 0008.scaffold00029 1069487 1 C T - ReadM SNP 0008.scaffold00029 1069920 1 A G - ReadM SNP 0008.scaffold00029 1069999 1 G A - ReadM SNP 0008.scaffold00029 1071556 1 T A - ReadM SNP 0008.scaffold00029 1071697 1 G A - ReadM SNP 0008.scaffold00029 1071735 1 C T - ReadM SNP 0008.scaffold00029 1071840 1 G T - ReadM SNP 0008.scaffold00029 1071847 1 G A - ReadM SNP 0008.scaffold00029 1071896 1 T C - Both SNP 0008.scaffold00029 1072015 1 A G scaffold12090 ReadM SNP 0008.scaffold00029 1072115 1 A C - ReadM SNP 0008.scaffold00029 1072150 1 C T - ReadM INDEL 0008.scaffold00029 1072290 1 . A - ReadM SNP 0008.scaffold00029 1072353 1 C T - ReadM SNP 0008.scaffold00029 1072367 1 C A - ReadM SNP 0008.scaffold00029 1072626 1 C T - ReadM SNP 0008.scaffold00029 1072670 1 A G - ScafM SNP 0008.scaffold00029 1073709 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1073741 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1073923 1 G A scaffold12090 Both SNP 0008.scaffold00029 1073942 1 A C scaffold12090 Both SNP 0008.scaffold00029 1073996 1 A G scaffold12090 Both SNP 0008.scaffold00029 1074011 1 C A scaffold12090 Both INDEL 0008.scaffold00029 1074103 1 A . scaffold12090 Both SNP 0008.scaffold00029 1074112 1 A G scaffold12090 Both SNP 0008.scaffold00029 1074119 1 G T scaffold12090 ReadM SNP 0008.scaffold00029 1074188 1 T C - ReadM SNP 0008.scaffold00029 1074279 2 TG CA - ReadM SNP 0008.scaffold00029 1074317 1 A G - ReadM SNP 0008.scaffold00029 1074424 1 G T - Both SNP 0008.scaffold00029 1074900 1 C T scaffold12090 ReadM SNP 0008.scaffold00029 1074982 1 C T - ReadM SNP 0008.scaffold00029 1075122 2 AA TG - ReadM SNP 0008.scaffold00029 1075222 1 G A - ReadM SNP 0008.scaffold00029 1075243 1 C G - ReadM INDEL 0008.scaffold00029 1075460 1 A . - ReadM SNP 0008.scaffold00029 1075470 1 A G - ReadM SNP 0008.scaffold00029 1075602 1 A T - ReadM SNP 0008.scaffold00029 1075820 1 T C - ReadM SNP 0008.scaffold00029 1075970 1 C T - Both SNP 0008.scaffold00029 1076021 1 C T scaffold12090 Both SNP 0008.scaffold00029 1076184 1 A G scaffold12090 ReadM SNP 0008.scaffold00029 1076230 1 G T - ReadM SNP 0008.scaffold00029 1076251 1 T C - ReadM INDEL 0008.scaffold00029 1076315 1 C . - ReadM SNP 0008.scaffold00029 1076315 1 C T - Both SNP 0008.scaffold00029 1076329 1 G T scaffold12090 ReadM INDEL 0008.scaffold00029 1076383 1 . T - ReadM SNP 0008.scaffold00029 1076429 1 C T - ReadM SNP 0008.scaffold00029 1076503 1 C T - ReadM SNP 0008.scaffold00029 1076561 1 G C - ReadM SNP 0008.scaffold00029 1076640 1 T C - ReadM SNP 0008.scaffold00029 1079355 1 C A - ReadM SNP 0008.scaffold00029 1079390 1 C T - ReadM SNP 0008.scaffold00029 1079421 1 A T - ReadM SNP 0008.scaffold00029 1079487 1 A C - ReadM SNP 0008.scaffold00029 1079566 1 C T - ReadM SNP 0008.scaffold00029 1079748 1 G C - ReadM SNP 0008.scaffold00029 1079762 1 A T - ReadM SNP 0008.scaffold00029 1079854 1 A T - ReadM SNP 0008.scaffold00029 1080080 1 T C - ReadM SNP 0008.scaffold00029 1080123 1 T C - ReadM SNP 0008.scaffold00029 1080253 1 G A - ReadM SNP 0008.scaffold00029 1080321 1 A G - ReadM SNP 0008.scaffold00029 1080409 1 A T - ReadM SNP 0008.scaffold00029 1080552 1 T C - ReadM SNP 0008.scaffold00029 1080561 1 T C - ReadM SNP 0008.scaffold00029 1080600 1 A C - ReadM SNP 0008.scaffold00029 1080642 1 G A - ReadM SNP 0008.scaffold00029 1080735 1 A C - ReadM SNP 0008.scaffold00029 1080815 1 A G - ReadM SNP 0008.scaffold00029 1080924 1 A C - ReadM SNP 0008.scaffold00029 1081050 1 G A - ReadM SNP 0008.scaffold00029 1081177 1 A T - ReadM SNP 0008.scaffold00029 1081181 1 G T - ReadM SNP 0008.scaffold00029 1081451 1 A T - ReadM SNP 0008.scaffold00029 1081543 1 A G - ReadM SNP 0008.scaffold00029 1081970 1 G A - ReadM SNP 0008.scaffold00029 1082089 1 T C - ReadM SNP 0008.scaffold00029 1082243 1 G A - ReadM SNP 0008.scaffold00029 1082717 1 G A - ReadM SNP 0008.scaffold00029 1082913 1 A G - ReadM SNP 0008.scaffold00029 1083041 1 C A - ReadM SNP 0008.scaffold00029 1083121 1 C G - ReadM SNP 0008.scaffold00029 1083646 1 G T - ReadM SNP 0008.scaffold00029 1083674 1 G A - ReadM SNP 0008.scaffold00029 1083823 1 C T - ScafM SNP 0008.scaffold00029 1084633 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1084650 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1084715 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1084724 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1084750 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1084998 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1085003 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1085048 2 GG TA scaffold12090 ScafM SNP 0008.scaffold00029 1085051 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1085053 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1085092 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1085101 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1085103 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1085110 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1085113 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1085122 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1085135 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1085182 4 CGTC .... scaffold12090 ScafM INDEL 0008.scaffold00029 1085191 4 ACCT .... scaffold12090 ScafM INDEL 0008.scaffold00029 1085199 1 T . scaffold12090 ScafM INDEL 0008.scaffold00029 1085204 3 TTT ... scaffold12090 ScafM SNP 0008.scaffold00029 1085217 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1085245 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1085252 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1085278 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1085840 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1085842 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1085852 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1085876 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1085912 2 AA .. scaffold12090 ScafM SNP 0008.scaffold00029 1085916 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1085918 2 AT GG scaffold12090 ScafM SNP 0008.scaffold00029 1085922 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1085927 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1085939 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1085944 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1085949 1 A T scaffold12090 ScafM INDEL 0008.scaffold00029 1085962 3 GAT ... scaffold12090 ScafM SNP 0008.scaffold00029 1085980 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1086008 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1086018 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086025 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1086032 1 T G scaffold12090 ScafM INDEL 0008.scaffold00029 1086038 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1086052 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086062 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086068 1 G C scaffold12090 ScafM INDEL 0008.scaffold00029 1086081 1 A . scaffold12090 ScafM SNP 0008.scaffold00029 1086105 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086117 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1086227 2 CT TC scaffold12090 ScafM SNP 0008.scaffold00029 1086233 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1086251 1 . C scaffold12090 ScafM SNP 0008.scaffold00029 1086270 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1086284 24 ........................ TGGGGGACTCAGAAGATCTCCCAA scaffold12090 ScafM SNP 0008.scaffold00029 1086301 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086310 2 CA TG scaffold12090 ScafM SNP 0008.scaffold00029 1086342 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1086347 2 CT TC scaffold12090 ScafM SNP 0008.scaffold00029 1086372 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086377 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1086382 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086384 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1086390 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086410 2 CC TT scaffold12090 ScafM SNP 0008.scaffold00029 1086433 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086449 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1086455 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086477 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1086480 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086482 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086489 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1086511 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1086520 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086524 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1086545 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086552 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1086559 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1086565 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086568 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086571 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1086582 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1086593 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086600 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1086602 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086614 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1086645 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1086648 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1086680 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1086682 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1086687 1 A C scaffold12090 ScafM INDEL 0008.scaffold00029 1086692 1 . T scaffold12090 ScafM SNP 0008.scaffold00029 1086694 1 G C scaffold12090 ScafM INDEL 0008.scaffold00029 1086696 1 C . scaffold12090 ScafM SNP 0008.scaffold00029 1086713 2 CC TT scaffold12090 ScafM SNP 0008.scaffold00029 1086720 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1088792 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1088798 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1088802 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1088853 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1089292 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089299 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1089309 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089313 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1089317 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1089330 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089355 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089357 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1089367 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1089377 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089397 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089422 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089432 2 CT TC scaffold12090 ScafM INDEL 0008.scaffold00029 1089440 5 TCGCC ..... scaffold12090 ScafM SNP 0008.scaffold00029 1089463 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089467 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089476 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1089483 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1089503 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089505 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1089517 1 . A scaffold12090 ScafM SNP 0008.scaffold00029 1089521 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1089524 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1089526 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1089534 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1089548 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1089552 2 .T AC scaffold12090 ScafM SNP 0008.scaffold00029 1089568 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089582 2 GG AT scaffold12090 ScafM SNP 0008.scaffold00029 1089587 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1089602 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089893 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1089897 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1089911 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1089920 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089938 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1089944 4 TAAT .... scaffold12090 ScafM INDEL 0008.scaffold00029 1089956 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1089968 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1089986 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1089995 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1089998 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090001 1 A T scaffold12090 ScafM INDEL 0008.scaffold00029 1090020 2 TA .. scaffold12090 ScafM SNP 0008.scaffold00029 1090032 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090043 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1090055 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1090057 3 TTC ... scaffold12090 ScafM INDEL 0008.scaffold00029 1090063 2 CA .. scaffold12090 ScafM SNP 0008.scaffold00029 1090074 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1090088 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090103 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1090107 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090116 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090130 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090140 2 AA CG scaffold12090 ScafM SNP 0008.scaffold00029 1090144 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1090167 5 ..... TCTTC scaffold12090 ScafM INDEL 0008.scaffold00029 1090189 2 GA .. scaffold12090 ScafM INDEL 0008.scaffold00029 1090192 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1090238 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090241 1 A C scaffold12090 ScafM INDEL 0008.scaffold00029 1090264 1 . T scaffold12090 ScafM SNP 0008.scaffold00029 1090273 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1090276 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1090286 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090293 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1090340 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1090353 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1090392 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090398 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1090429 1 . T scaffold12090 ScafM SNP 0008.scaffold00029 1090443 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090450 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1090452 2 GA AG scaffold12090 ScafM SNP 0008.scaffold00029 1090458 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1090462 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090473 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1090686 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1090708 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1090733 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1090737 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1090821 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1090836 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1090879 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1090888 1 C . scaffold12090 ScafM SNP 0008.scaffold00029 1090891 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1090918 1 T G scaffold12090 ScafM INDEL 0008.scaffold00029 1090928 1 . T scaffold12090 ScafM SNP 0008.scaffold00029 1091014 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091023 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091037 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1091041 2 CT AC scaffold12090 ScafM INDEL 0008.scaffold00029 1091045 5 ATGAA ..... scaffold12090 ScafM SNP 0008.scaffold00029 1091059 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091068 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091079 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091084 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091091 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091140 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091205 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091228 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091234 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091247 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091267 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091307 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091312 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091314 2 CT TC scaffold12090 ScafM SNP 0008.scaffold00029 1091317 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091326 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091345 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091349 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091363 2 GA AG scaffold12090 ScafM SNP 0008.scaffold00029 1091372 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091394 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091396 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1091400 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1091404 3 TAA ATT scaffold12090 ScafM SNP 0008.scaffold00029 1091408 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091418 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091440 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091452 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1091467 1 C . scaffold12090 ScafM INDEL 0008.scaffold00029 1091469 3 AAA ... scaffold12090 ScafM SNP 0008.scaffold00029 1091476 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091522 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091555 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091558 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091598 2 AC TG scaffold12090 Both INDEL 0008.scaffold00029 1091655 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1091668 1 G T scaffold12090 ScafM INDEL 0008.scaffold00029 1091688 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1091695 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1091700 3 AAA ..T scaffold12090 ScafM SNP 0008.scaffold00029 1091731 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091734 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091736 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1091739 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091746 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1091757 2 GA AT scaffold12090 ScafM INDEL 0008.scaffold00029 1091767 2 .. AA scaffold12090 ScafM SNP 0008.scaffold00029 1091785 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091792 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091802 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1091805 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1091816 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091818 1 A T scaffold12090 Both SNP 0008.scaffold00029 1091839 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1091882 1 G A scaffold12090 Both SNP 0008.scaffold00029 1091884 1 C A scaffold12090 ScafM INDEL 0008.scaffold00029 1091928 4 GCAT .... scaffold12090 ScafM SNP 0008.scaffold00029 1091942 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091948 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1091973 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1091977 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1091999 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1092473 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1092521 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1092569 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1092599 2 CC TT scaffold12090 ScafM SNP 0008.scaffold00029 1092608 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1092610 2 AC GT scaffold12090 ScafM SNP 0008.scaffold00029 1092638 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1092666 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1092669 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1092686 1 A . scaffold12090 ScafM SNP 0008.scaffold00029 1092691 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1092704 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1092730 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1092744 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1092746 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1092754 3 GGG .CA scaffold12090 ScafM SNP 0008.scaffold00029 1092761 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1092763 2 .T CC scaffold12090 ScafM SNP 0008.scaffold00029 1092789 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1092794 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1092812 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1092826 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1092832 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1092834 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1092838 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1092858 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1092863 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1092885 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1092888 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1098664 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1102739 1 C A scaffold27049 ScafM SNP 0008.scaffold00029 1102750 1 G A scaffold27049 ScafM SNP 0008.scaffold00029 1102753 1 G C scaffold27049 ScafM SNP 0008.scaffold00029 1102772 1 G A scaffold27049 ScafM INDEL 0008.scaffold00029 1102789 1 C . scaffold27049 ScafM SNP 0008.scaffold00029 1102792 1 T C scaffold27049 ScafM SNP 0008.scaffold00029 1102806 1 T G scaffold27049 ScafM INDEL 0008.scaffold00029 1102817 1 . G scaffold27049 ScafM SNP 0008.scaffold00029 1102820 1 A G scaffold27049 ScafM SNP 0008.scaffold00029 1102837 1 C T scaffold27049 ScafM INDEL 0008.scaffold00029 1102848 11 ........... TTGCGCTTTTC scaffold27049 ScafM INDEL 0008.scaffold00029 1102849 6 ...... AAAAGA scaffold27049 ScafM INDEL 0008.scaffold00029 1102852 6 ...... AGAACA scaffold27049 ScafM INDEL 0008.scaffold00029 1102853 1 . A scaffold27049 ScafM SNP 0008.scaffold00029 1102868 1 C G scaffold27049 ScafM SNP 0008.scaffold00029 1102877 1 G T scaffold27049 ScafM SNP 0008.scaffold00029 1102888 1 T G scaffold27049 ScafM SNP 0008.scaffold00029 1102909 1 A T scaffold27049 ScafM SNP 0008.scaffold00029 1102914 1 T A scaffold27049 ScafM SNP 0008.scaffold00029 1102922 1 A C scaffold27049 ScafM SNP 0008.scaffold00029 1102925 1 G T scaffold27049 ScafM INDEL 0008.scaffold00029 1102933 1 A . scaffold27049 ScafM SNP 0008.scaffold00029 1102957 1 C T scaffold27049 ScafM SNP 0008.scaffold00029 1102972 1 G T scaffold27049 ScafM SNP 0008.scaffold00029 1103025 1 T C scaffold27049 ScafM SNP 0008.scaffold00029 1103040 1 A T scaffold27049 ScafM SNP 0008.scaffold00029 1103044 1 G C scaffold27049 ScafM INDEL 0008.scaffold00029 1103056 2 .. AC scaffold27049 ScafM SNP 0008.scaffold00029 1103058 1 G T scaffold27049 ScafM SNP 0008.scaffold00029 1103072 1 T A scaffold27049 ScafM SNP 0008.scaffold00029 1103089 1 G A scaffold27049 ScafM SNP 0008.scaffold00029 1103094 1 G T scaffold27049 ScafM SNP 0008.scaffold00029 1103101 1 G C scaffold27049 ScafM SNP 0008.scaffold00029 1103110 1 G A scaffold27049 ScafM SNP 0008.scaffold00029 1103129 1 T A scaffold27049 ScafM SNP 0008.scaffold00029 1103141 1 G A scaffold27049 ScafM SNP 0008.scaffold00029 1103146 2 CG TC scaffold27049 ScafM SNP 0008.scaffold00029 1103226 1 C T scaffold27049 ScafM SNP 0008.scaffold00029 1103233 1 A T scaffold27049 ScafM SNP 0008.scaffold00029 1103250 1 C A scaffold27049 ScafM SNP 0008.scaffold00029 1103253 1 T A scaffold27049 ScafM INDEL 0008.scaffold00029 1103259 6 ...... GTGCTA scaffold27049 ScafM INDEL 0008.scaffold00029 1103265 1 . C scaffold27049 ScafM INDEL 0008.scaffold00029 1103266 7 ....... GCGAAAC scaffold27049 ScafM INDEL 0008.scaffold00029 1103270 13 ............. AAAGTGCAGGCGC scaffold27049 ScafM INDEL 0008.scaffold00029 1103271 1 . A scaffold27049 ScafM INDEL 0008.scaffold00029 1103273 3 ... GAG scaffold27049 ScafM INDEL 0008.scaffold00029 1103274 2 .. TT scaffold27049 ScafM SNP 0008.scaffold00029 1103283 1 A T scaffold27049 ScafM SNP 0008.scaffold00029 1103300 2 TT GA scaffold27049 ScafM SNP 0008.scaffold00029 1103325 1 C T scaffold27049 ScafM SNP 0008.scaffold00029 1103351 1 G A scaffold27049 ScafM INDEL 0008.scaffold00029 1103372 3 TTT ... scaffold27049 ScafM SNP 0008.scaffold00029 1103382 1 G T scaffold27049 ScafM SNP 0008.scaffold00029 1103387 1 G A scaffold27049 ScafM SNP 0008.scaffold00029 1103415 1 A G scaffold27049 ScafM SNP 0008.scaffold00029 1103601 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1103616 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1103643 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1103670 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1103692 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1103698 9 ......... TCCAATTTC scaffold12090 ScafM INDEL 0008.scaffold00029 1103699 5 ..... AATTT scaffold12090 ScafM SNP 0008.scaffold00029 1103779 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1103781 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1103812 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1103826 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1103838 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1103856 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1103892 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1103904 1 G . scaffold12090 ScafM SNP 0008.scaffold00029 1103908 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1103925 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1103935 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1103956 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1103959 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1103964 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1103995 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1104020 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1104112 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1104119 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1104126 1 T C scaffold12090 Both SNP 0008.scaffold00029 1104152 1 C A scaffold12090 Both SNP 0008.scaffold00029 1104209 1 G A scaffold12090 Both SNP 0008.scaffold00029 1104222 1 A C scaffold12090 Both SNP 0008.scaffold00029 1104320 1 G T scaffold12090 Both SNP 0008.scaffold00029 1104366 1 A G scaffold12090 Both INDEL 0008.scaffold00029 1104424 1 C . scaffold12090 ScafM SNP 0008.scaffold00029 1104428 1 T G scaffold12090 Both SNP 0008.scaffold00029 1104450 1 T G scaffold12090 Both SNP 0008.scaffold00029 1104493 1 C A scaffold12090 Both SNP 0008.scaffold00029 1104502 1 C A scaffold12090 Both SNP 0008.scaffold00029 1104556 1 C G scaffold12090 Both SNP 0008.scaffold00029 1104566 1 G A scaffold12090 Both SNP 0008.scaffold00029 1104643 1 C G scaffold12090 Both SNP 0008.scaffold00029 1104663 1 C T scaffold12090 Both SNP 0008.scaffold00029 1104737 1 C G scaffold12090 Both SNP 0008.scaffold00029 1104809 1 T C scaffold12090 Both SNP 0008.scaffold00029 1104873 1 T C scaffold12090 Both INDEL 0008.scaffold00029 1104926 1 . T scaffold12090 Both INDEL 0008.scaffold00029 1105068 2 TG .. scaffold12090 Both SNP 0008.scaffold00029 1105199 1 T G scaffold12090 ReadM SNP 0008.scaffold00029 1105483 1 C T - ReadM INDEL 0008.scaffold00029 1105532 2 TA .. - ReadM SNP 0008.scaffold00029 1105725 1 T C - ReadM INDEL 0008.scaffold00029 1105773 1 . G - ReadM SNP 0008.scaffold00029 1106037 1 G T - ReadM SNP 0008.scaffold00029 1106075 1 T A - ReadM SNP 0008.scaffold00029 1106124 1 C T - ReadM SNP 0008.scaffold00029 1106506 1 G A - ReadM SNP 0008.scaffold00029 1106528 1 A G - ReadM SNP 0008.scaffold00029 1106598 1 G T - ReadM SNP 0008.scaffold00029 1106678 1 G A - ReadM SNP 0008.scaffold00029 1106684 1 C T - ReadM SNP 0008.scaffold00029 1107293 1 G A - ReadM SNP 0008.scaffold00029 1107393 1 T G - ReadM INDEL 0008.scaffold00029 1108489 1 . T - ReadM SNP 0008.scaffold00029 1108707 1 T C - ReadM SNP 0008.scaffold00029 1108767 1 G A - ReadM SNP 0008.scaffold00029 1108948 1 A T - ReadM SNP 0008.scaffold00029 1109112 1 T G - ReadM SNP 0008.scaffold00029 1109152 1 C T - ScafM INDEL 0008.scaffold00029 1115547 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1115549 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1115551 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1115634 16 ................ TATATATATATATATA scaffold12090 ScafM SNP 0008.scaffold00029 1115838 1 A G scaffold12090 Both INDEL 0008.scaffold00029 1116137 1 C . scaffold12090 Both SNP 0008.scaffold00029 1116260 1 T C scaffold12090 Both SNP 0008.scaffold00029 1116326 1 A G scaffold12090 Both SNP 0008.scaffold00029 1116348 1 G C scaffold12090 Both SNP 0008.scaffold00029 1116410 1 T C scaffold12090 Both SNP 0008.scaffold00029 1116627 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1116853 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1116855 1 G A scaffold12090 Both SNP 0008.scaffold00029 1117008 1 G C scaffold12090 Both SNP 0008.scaffold00029 1117101 1 T C scaffold12090 Both SNP 0008.scaffold00029 1117163 1 C G scaffold12090 ScafM INDEL 0008.scaffold00029 1117237 1 T . scaffold12090 ScafM SNP 0008.scaffold00029 1117250 2 CC AA scaffold12090 ScafM SNP 0008.scaffold00029 1117255 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1117260 1 C A scaffold12090 Both SNP 0008.scaffold00029 1117499 1 T C scaffold12090 Both SNP 0008.scaffold00029 1117807 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1118173 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1118240 1 T A scaffold12090 Both INDEL 0008.scaffold00029 1118320 2 GT .. scaffold12090 Both SNP 0008.scaffold00029 1118367 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1118492 1 A C scaffold12090 ReadM SNP 0008.scaffold00029 1118709 1 G T - Both SNP 0008.scaffold00029 1119317 1 C T scaffold12090 Both SNP 0008.scaffold00029 1119365 1 A G scaffold12090 Both SNP 0008.scaffold00029 1119382 1 T C scaffold12090 Both SNP 0008.scaffold00029 1119482 1 C G scaffold12090 Both SNP 0008.scaffold00029 1119820 1 T A scaffold12090 ReadM SNP 0008.scaffold00029 1120096 1 T A - ReadM INDEL 0008.scaffold00029 1120128 2 .. AT - ScafM INDEL 0008.scaffold00029 1120291 1 . C scaffold12090 ScafM INDEL 0008.scaffold00029 1120293 5 ..... CCCCC scaffold12090 ScafM SNP 0008.scaffold00029 1120307 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1120310 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1120312 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1120314 2 TT CC scaffold12090 Both SNP 0008.scaffold00029 1120545 1 A G scaffold12090 Both SNP 0008.scaffold00029 1120550 1 T G scaffold12090 Both SNP 0008.scaffold00029 1120989 1 A T scaffold12090 Both INDEL 0008.scaffold00029 1121007 1 T . scaffold12090 Both SNP 0008.scaffold00029 1121034 1 T G scaffold12090 Both SNP 0008.scaffold00029 1121058 1 T G scaffold12090 Both SNP 0008.scaffold00029 1121264 1 G T scaffold12090 Both SNP 0008.scaffold00029 1121300 1 T C scaffold12090 Both SNP 0008.scaffold00029 1121354 1 A C scaffold12090 Both SNP 0008.scaffold00029 1121414 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1121496 37 TACTTAGCTTCTAAAGTTGGTTGTACTTTATCGATGC ..................................... scaffold12090 Both INDEL 0008.scaffold00029 1121548 1 A . scaffold12090 Both SNP 0008.scaffold00029 1121740 1 T C scaffold12090 Both SNP 0008.scaffold00029 1121767 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1121865 8 GTGTAGTC ........ scaffold12090 ScafM SNP 0008.scaffold00029 1121998 2 AC TT scaffold12090 ScafM SNP 0008.scaffold00029 1122033 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1122043 1 T C scaffold12090 Both SNP 0008.scaffold00029 1122281 1 T C scaffold12090 Both SNP 0008.scaffold00029 1122342 1 A T scaffold12090 Both SNP 0008.scaffold00029 1122355 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1122366 3 ATG ..C scaffold12090 ScafM SNP 0008.scaffold00029 1122384 1 G A scaffold12090 Both SNP 0008.scaffold00029 1122395 1 G C scaffold12090 Both SNP 0008.scaffold00029 1122445 1 T G scaffold12090 Both SNP 0008.scaffold00029 1122454 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1122497 2 .. AA scaffold12090 ScafM SNP 0008.scaffold00029 1122502 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1122511 1 C T scaffold12090 ReadM SNP 0008.scaffold00029 1122581 1 C T - ReadM SNP 0008.scaffold00029 1122663 1 A C - ReadM SNP 0008.scaffold00029 1122775 1 A G - ReadM SNP 0008.scaffold00029 1122845 1 T C - ReadM SNP 0008.scaffold00029 1122860 1 T C - ReadM SNP 0008.scaffold00029 1123006 1 A C - Both SNP 0008.scaffold00029 1123060 1 A G scaffold12090 Both SNP 0008.scaffold00029 1123062 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1123076 1 A T scaffold12090 Both SNP 0008.scaffold00029 1123103 1 T C scaffold12090 Both SNP 0008.scaffold00029 1123110 1 A G scaffold12090 Both SNP 0008.scaffold00029 1123138 1 C T scaffold12090 ReadM SNP 0008.scaffold00029 1123264 1 C T - ReadM SNP 0008.scaffold00029 1123289 1 T C - ReadM INDEL 0008.scaffold00029 1123349 1 A . - ReadM SNP 0008.scaffold00029 1123373 1 C T - ScafM SNP 0008.scaffold00029 1123656 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1123701 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1123717 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1123741 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1123756 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1123761 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1123817 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1125794 1 . T scaffold12090 ScafM INDEL 0008.scaffold00029 1125815 3 AAT ... scaffold12090 ScafM INDEL 0008.scaffold00029 1125821 1 G . scaffold12090 ScafM INDEL 0008.scaffold00029 1125823 3 AAA ... scaffold12090 ScafM INDEL 0008.scaffold00029 1125827 1 C . scaffold12090 ScafM INDEL 0008.scaffold00029 1125894 31 ACCCCTCAAAAAAAAAACAATGTTTTTTACG ............................... scaffold12090 ScafM INDEL 0008.scaffold00029 1125959 4 GATC .... scaffold12090 ScafM SNP 0008.scaffold00029 1125968 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1125991 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1126019 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1126033 4 TTAA .... scaffold12090 ScafM INDEL 0008.scaffold00029 1126051 2 .. AC scaffold12090 ScafM SNP 0008.scaffold00029 1126065 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1126078 2 AT TC scaffold12090 ScafM INDEL 0008.scaffold00029 1126085 1 A . scaffold12090 ScafM INDEL 0008.scaffold00029 1126111 1 . T scaffold12090 ScafM SNP 0008.scaffold00029 1126113 1 G T scaffold12090 ScafM INDEL 0008.scaffold00029 1126142 4 TATA .... scaffold12090 ScafM INDEL 0008.scaffold00029 1126166 3 ... TAG scaffold12090 ScafM SNP 0008.scaffold00029 1126191 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1126195 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1126206 3 TAT ... scaffold12090 ScafM SNP 0008.scaffold00029 1126583 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1126644 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1126646 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1126664 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1126698 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1126838 1 G C scaffold12090 ScafM INDEL 0008.scaffold00029 1126963 6 TTATAT ...... scaffold12090 ScafM SNP 0008.scaffold00029 1127017 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1127068 1 C . scaffold12090 ScafM SNP 0008.scaffold00029 1127074 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127105 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127111 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1127119 2 .. TT scaffold12090 ScafM INDEL 0008.scaffold00029 1127120 22 ...................... TTATTTTTATTTTTATTTTTAT scaffold12090 ScafM SNP 0008.scaffold00029 1127133 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1127161 1 C G scaffold12090 ScafM INDEL 0008.scaffold00029 1127168 3 GAA ... scaffold12090 ScafM SNP 0008.scaffold00029 1127172 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127175 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127177 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127190 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127195 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1127215 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1127223 1 . T scaffold12090 ScafM INDEL 0008.scaffold00029 1127227 3 ... TTT scaffold12090 ScafM INDEL 0008.scaffold00029 1127233 1 . A scaffold12090 ScafM INDEL 0008.scaffold00029 1127234 2 .. AA scaffold12090 ScafM INDEL 0008.scaffold00029 1127235 1 . G scaffold12090 ScafM INDEL 0008.scaffold00029 1127237 3 ... TGC scaffold12090 ScafM INDEL 0008.scaffold00029 1127242 4 .... AAAG scaffold12090 ScafM SNP 0008.scaffold00029 1127246 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1127247 2 .C AA scaffold12090 ScafM SNP 0008.scaffold00029 1127250 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1127270 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127284 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127286 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127305 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127308 2 GG TA scaffold12090 ScafM SNP 0008.scaffold00029 1127334 2 CG GA scaffold12090 ScafM SNP 0008.scaffold00029 1127347 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127379 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127408 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1127417 4 AATT .... scaffold12090 ScafM SNP 0008.scaffold00029 1127424 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1127436 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127444 2 TG CT scaffold12090 ScafM INDEL 0008.scaffold00029 1127450 1 A . scaffold12090 ScafM SNP 0008.scaffold00029 1127455 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127457 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127479 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1127487 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127497 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1127519 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127521 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127533 1 C A scaffold12090 ScafM SNP 0008.scaffold00029 1127541 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1127560 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127564 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127577 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127582 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127584 2 AA GT scaffold12090 ScafM INDEL 0008.scaffold00029 1127602 1 . A scaffold12090 ScafM INDEL 0008.scaffold00029 1127603 3 ... ATA scaffold12090 ScafM SNP 0008.scaffold00029 1127620 4 TGGG CCAA scaffold12090 ScafM SNP 0008.scaffold00029 1127641 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127657 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127659 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127666 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127697 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127701 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1127706 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1127708 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127725 2 GC TT scaffold12090 ScafM SNP 0008.scaffold00029 1127747 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127754 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1127817 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127820 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1127827 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127835 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127840 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127848 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1127859 3 CTT ... scaffold12090 ScafM SNP 0008.scaffold00029 1127864 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1127891 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127895 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1127902 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1127910 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1127920 4 .... TTTT scaffold12090 ScafM SNP 0008.scaffold00029 1127926 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1127928 1 G T scaffold12090 ScafM INDEL 0008.scaffold00029 1127931 1 . G scaffold12090 ScafM INDEL 0008.scaffold00029 1127932 3 ..G ACA scaffold12090 ScafM SNP 0008.scaffold00029 1127971 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1127976 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1127981 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1128000 1 T A scaffold12090 ScafM INDEL 0008.scaffold00029 1128003 4 .... GTAC scaffold12090 ScafM SNP 0008.scaffold00029 1128025 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1128038 1 . A scaffold12090 ScafM SNP 0008.scaffold00029 1128043 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1128261 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1128270 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1128279 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1128296 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1128298 6 ...... ACCACC scaffold12090 ScafM SNP 0008.scaffold00029 1128308 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128321 1 A C scaffold12090 ScafM SNP 0008.scaffold00029 1128358 2 AT CC scaffold12090 ScafM SNP 0008.scaffold00029 1128366 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128384 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1128392 2 .. TC scaffold12090 ScafM INDEL 0008.scaffold00029 1128394 1 . G scaffold12090 ScafM SNP 0008.scaffold00029 1128398 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1128409 1 G . scaffold12090 ScafM INDEL 0008.scaffold00029 1128412 1 G . scaffold12090 ScafM INDEL 0008.scaffold00029 1128414 2 GG .. scaffold12090 ScafM INDEL 0008.scaffold00029 1128417 8 GCTTTGGT ........ scaffold12090 ScafM SNP 0008.scaffold00029 1128429 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1128449 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128459 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128461 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128470 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1128476 3 ... TGA scaffold12090 ScafM SNP 0008.scaffold00029 1128491 2 CA TG scaffold12090 ScafM SNP 0008.scaffold00029 1128495 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1128508 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128516 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128522 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128539 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128556 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1128560 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1128565 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1128576 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1128581 2 GT AC scaffold12090 ScafM SNP 0008.scaffold00029 1128596 2 GG AA scaffold12090 ScafM SNP 0008.scaffold00029 1128602 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128605 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128613 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128624 2 CA TG scaffold12090 ScafM SNP 0008.scaffold00029 1128630 2 CC GT scaffold12090 ScafM SNP 0008.scaffold00029 1128645 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128648 2 AA GT scaffold12090 ScafM SNP 0008.scaffold00029 1128656 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1128658 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1128665 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128668 1 G A scaffold12090 ScafM INDEL 0008.scaffold00029 1128708 1 . A scaffold12090 ScafM INDEL 0008.scaffold00029 1128709 1 . T scaffold12090 ScafM INDEL 0008.scaffold00029 1128710 1 . A scaffold12090 ScafM SNP 0008.scaffold00029 1128721 2 AT TA scaffold12090 ScafM SNP 0008.scaffold00029 1128743 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1128749 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128764 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128766 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128781 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1128784 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1128801 1 G T scaffold12090 ScafM SNP 0008.scaffold00029 1128811 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128821 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1128827 1 C G scaffold12090 ScafM SNP 0008.scaffold00029 1128848 2 GG TT scaffold12090 ScafM SNP 0008.scaffold00029 1128852 2 CA TG scaffold12090 ScafM INDEL 0008.scaffold00029 1128864 5 AGGGT ..... scaffold12090 ScafM INDEL 0008.scaffold00029 1128871 3 TGG ... scaffold12090 ScafM INDEL 0008.scaffold00029 1128875 2 GG .A scaffold12090 ScafM SNP 0008.scaffold00029 1128884 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1128886 1 T A scaffold12090 ScafM SNP 0008.scaffold00029 1128905 2 AG GA scaffold12090 ScafM SNP 0008.scaffold00029 1129603 1 G T scaffold12090 ScafM INDEL 0008.scaffold00029 1129605 3 ... GAC scaffold12090 ScafM SNP 0008.scaffold00029 1129619 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1129622 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1129646 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1129659 1 C G scaffold12090 ScafM INDEL 0008.scaffold00029 1129661 2 AG .. scaffold12090 ScafM INDEL 0008.scaffold00029 1129664 1 T . scaffold12090 ScafM INDEL 0008.scaffold00029 1129666 1 G . scaffold12090 ScafM SNP 0008.scaffold00029 1129675 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1129699 1 A G scaffold12090 ScafM INDEL 0008.scaffold00029 1129702 2 AT .. scaffold12090 ScafM SNP 0008.scaffold00029 1129706 1 G C scaffold12090 ScafM SNP 0008.scaffold00029 1129708 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1129721 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1129745 1 T G scaffold12090 ScafM SNP 0008.scaffold00029 1129752 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1129756 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1129773 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1129780 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1129787 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1129791 4 .... ATTA scaffold12090 ScafM SNP 0008.scaffold00029 1129806 1 A T scaffold12090 ScafM SNP 0008.scaffold00029 1129814 1 T C scaffold12090 ScafM SNP 0008.scaffold00029 1129823 1 G A scaffold12090 ScafM SNP 0008.scaffold00029 1129831 1 C T scaffold12090 ScafM INDEL 0008.scaffold00029 1129849 3 ... TAA scaffold12090 ScafM SNP 0008.scaffold00029 1129851 2 GC AT scaffold12090 ScafM INDEL 0008.scaffold00029 1129863 6 ...... GCTTTT scaffold12090 ScafM INDEL 0008.scaffold00029 1129864 1 . G scaffold12090 ScafM INDEL 0008.scaffold00029 1129866 2 .. TC scaffold12090 ScafM INDEL 0008.scaffold00029 1129868 1 . C scaffold12090 ScafM SNP 0008.scaffold00029 1129884 1 T C scaffold12090 ScafM INDEL 0008.scaffold00029 1129894 5 TTAGG ..... scaffold12090 ScafM INDEL 0008.scaffold00029 1129903 3 GAA ... scaffold12090 ScafM SNP 0008.scaffold00029 1129914 2 TG CA scaffold12090 ScafM SNP 0008.scaffold00029 1129932 1 C T scaffold12090 ScafM SNP 0008.scaffold00029 1129934 1 A G scaffold12090 ScafM SNP 0008.scaffold00029 1130419 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1130422 2 TA CC scaffold11323 ScafM SNP 0008.scaffold00029 1130431 2 AT GA scaffold11323 ScafM SNP 0008.scaffold00029 1130434 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1130451 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1130453 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1130466 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1130468 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1130471 2 .. TC scaffold11323 ScafM SNP 0008.scaffold00029 1130472 1 A T scaffold11323 ScafM INDEL 0008.scaffold00029 1130474 2 .. AC scaffold11323 ScafM INDEL 0008.scaffold00029 1130505 2 .. GG scaffold11323 ScafM INDEL 0008.scaffold00029 1130552 1 A . scaffold11323 ScafM SNP 0008.scaffold00029 1130566 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1130649 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1130735 1 A C scaffold11323 ScafM INDEL 0008.scaffold00029 1130742 2 .. AA scaffold11323 ScafM SNP 0008.scaffold00029 1130753 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1130756 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1130766 2 .. AT scaffold11323 ScafM INDEL 0008.scaffold00029 1130827 2 .C TT scaffold11323 ScafM INDEL 0008.scaffold00029 1130845 12 TCCGTGTTGAGA ............ scaffold11323 ScafM INDEL 0008.scaffold00029 1131188 1 T . scaffold11323 Both INDEL 0008.scaffold00029 1131200 1 . T scaffold11323 Both SNP 0008.scaffold00029 1131464 2 AA GG scaffold11323 Both SNP 0008.scaffold00029 1131823 1 T C scaffold11323 Both SNP 0008.scaffold00029 1131903 1 A G scaffold11323 Both SNP 0008.scaffold00029 1131982 1 A T scaffold11323 Both SNP 0008.scaffold00029 1132332 1 T A scaffold11323 Both SNP 0008.scaffold00029 1132337 1 A G scaffold11323 Both SNP 0008.scaffold00029 1132373 1 T C scaffold11323 Both SNP 0008.scaffold00029 1132461 1 C T scaffold11323 Both INDEL 0008.scaffold00029 1132721 1 . T scaffold11323 ScafM SNP 0008.scaffold00029 1132728 1 G T scaffold11323 Both SNP 0008.scaffold00029 1132815 1 C A scaffold11323 Both SNP 0008.scaffold00029 1132948 1 T C scaffold11323 Both INDEL 0008.scaffold00029 1133003 2 .. CA scaffold11323 ScafM SNP 0008.scaffold00029 1133004 1 T G scaffold11323 Both SNP 0008.scaffold00029 1133079 1 T G scaffold11323 Both SNP 0008.scaffold00029 1133142 1 G A scaffold11323 Both SNP 0008.scaffold00029 1133668 1 A T scaffold11323 Both SNP 0008.scaffold00029 1133779 1 A T scaffold11323 Both SNP 0008.scaffold00029 1133839 1 C A scaffold11323 Both SNP 0008.scaffold00029 1133853 1 C T scaffold11323 Both INDEL 0008.scaffold00029 1133989 3 TTT ... scaffold11323 Both SNP 0008.scaffold00029 1134250 1 T C scaffold11323 Both SNP 0008.scaffold00029 1134688 1 G A scaffold11323 Both SNP 0008.scaffold00029 1134842 1 C T scaffold11323 Both SNP 0008.scaffold00029 1134928 1 G A scaffold11323 Both SNP 0008.scaffold00029 1134945 1 A C scaffold11323 Both SNP 0008.scaffold00029 1135075 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1135890 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1136002 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1136035 1 T C scaffold11323 Both SNP 0008.scaffold00029 1136349 1 C T scaffold11323 Both SNP 0008.scaffold00029 1136470 1 G C scaffold11323 Both SNP 0008.scaffold00029 1136518 1 T G scaffold11323 Both SNP 0008.scaffold00029 1136556 1 T C scaffold11323 Both SNP 0008.scaffold00029 1136765 1 C T scaffold11323 Both SNP 0008.scaffold00029 1136776 1 T A scaffold11323 Both SNP 0008.scaffold00029 1136931 1 G A scaffold11323 Both SNP 0008.scaffold00029 1137138 1 A C scaffold11323 Both SNP 0008.scaffold00029 1137224 1 G A scaffold11323 Both SNP 0008.scaffold00029 1137509 1 C T scaffold11323 Both SNP 0008.scaffold00029 1137601 1 G T scaffold11323 Both SNP 0008.scaffold00029 1137755 1 T C scaffold11323 Both SNP 0008.scaffold00029 1137775 1 C T scaffold11323 Both SNP 0008.scaffold00029 1137903 1 C T scaffold11323 Both SNP 0008.scaffold00029 1137930 1 T C scaffold11323 Both SNP 0008.scaffold00029 1137990 1 T C scaffold11323 Both SNP 0008.scaffold00029 1138720 1 G T scaffold11323 Both SNP 0008.scaffold00029 1138841 1 G A scaffold11323 ReadM SNP 0008.scaffold00029 1139420 1 C T - ReadM SNP 0008.scaffold00029 1139548 1 C T - Both SNP 0008.scaffold00029 1139636 1 C T scaffold11323 Both SNP 0008.scaffold00029 1139691 1 A T scaffold11323 Both SNP 0008.scaffold00029 1139761 1 T A scaffold11323 Both SNP 0008.scaffold00029 1139846 1 G A scaffold11323 Both SNP 0008.scaffold00029 1140328 1 T A scaffold11323 Both SNP 0008.scaffold00029 1140339 1 T A scaffold11323 Both SNP 0008.scaffold00029 1140525 1 A T scaffold11323 ScafM INDEL 0008.scaffold00029 1140652 8 AATTAATA ........ scaffold11323 Both SNP 0008.scaffold00029 1140735 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1140827 2 TA AT scaffold11323 Both SNP 0008.scaffold00029 1140934 1 A G scaffold11323 Both SNP 0008.scaffold00029 1140951 1 T G scaffold11323 Both SNP 0008.scaffold00029 1140965 1 T C scaffold11323 ReadM SNP 0008.scaffold00029 1141221 1 T C - ScafM INDEL 0008.scaffold00029 1141477 1 C . scaffold11323 ScafM INDEL 0008.scaffold00029 1141480 1 . C scaffold11323 ScafM INDEL 0008.scaffold00029 1142266 1 T . scaffold11323 ScafM SNP 0008.scaffold00029 1142490 1 T G scaffold11323 Both SNP 0008.scaffold00029 1142811 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1142853 1 G C scaffold11323 Both INDEL 0008.scaffold00029 1143120 2 .. GT scaffold11323 Both SNP 0008.scaffold00029 1143170 1 A G scaffold11323 Both SNP 0008.scaffold00029 1143177 1 T C scaffold11323 Both SNP 0008.scaffold00029 1143295 1 G A scaffold11323 Both INDEL 0008.scaffold00029 1143620 3 ... TAA scaffold11323 Both SNP 0008.scaffold00029 1143690 1 G C scaffold11323 Both SNP 0008.scaffold00029 1143745 1 G A scaffold11323 Both SNP 0008.scaffold00029 1144270 1 A T scaffold11323 Both SNP 0008.scaffold00029 1144417 1 C T scaffold11323 Both SNP 0008.scaffold00029 1144483 1 A G scaffold11323 Both SNP 0008.scaffold00029 1144808 1 A G scaffold11323 Both SNP 0008.scaffold00029 1145040 1 C A scaffold11323 ScafM INDEL 0008.scaffold00029 1145179 3 GGG ... scaffold11323 ScafM SNP 0008.scaffold00029 1145183 4 GGGG TTTT scaffold11323 ScafM SNP 0008.scaffold00029 1145191 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1145201 1 A T scaffold11323 Both SNP 0008.scaffold00029 1145282 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1145397 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1145791 3 ATA ... scaffold11323 ScafM INDEL 0008.scaffold00029 1145800 15 ACTGACATGATGGGT ............... scaffold11323 ScafM INDEL 0008.scaffold00029 1145819 3 TCT ... scaffold11323 Both SNP 0008.scaffold00029 1145857 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1145972 34 .................................. TCCTCAATTCTATTTTCTTAGTTGCTTCTGTTGC scaffold11323 Both INDEL 0008.scaffold00029 1146242 3 ... CTT scaffold11323 Both SNP 0008.scaffold00029 1146426 1 T G scaffold11323 Both SNP 0008.scaffold00029 1146491 1 T C scaffold11323 Both SNP 0008.scaffold00029 1146502 1 C T scaffold11323 Both SNP 0008.scaffold00029 1146599 1 T A scaffold11323 Both SNP 0008.scaffold00029 1146672 1 T C scaffold11323 Both SNP 0008.scaffold00029 1147113 1 T G scaffold11323 Both SNP 0008.scaffold00029 1147278 1 T C scaffold11323 Both SNP 0008.scaffold00029 1147561 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1147696 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1148054 1 . G scaffold11323 ScafM SNP 0008.scaffold00029 1148065 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1148683 2 TA .. scaffold11323 ScafM SNP 0008.scaffold00029 1148701 1 T G scaffold11323 ScafM INDEL 0008.scaffold00029 1148723 15 TCCTTTAAGTACTTG ............... scaffold11323 ScafM SNP 0008.scaffold00029 1148759 2 TG CA scaffold11323 ScafM SNP 0008.scaffold00029 1148859 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1148972 1 G T scaffold11323 Both SNP 0008.scaffold00029 1149140 1 A C scaffold11323 ScafM INDEL 0008.scaffold00029 1149199 16 AAACAAACACATGGAC ................ scaffold11323 ScafM INDEL 0008.scaffold00029 1149219 7 TTAGACA ....... scaffold11323 ScafM INDEL 0008.scaffold00029 1149237 2 AA .. scaffold11323 Both SNP 0008.scaffold00029 1149422 1 T C scaffold11323 Both SNP 0008.scaffold00029 1149492 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1149535 6 ...... TGCTGT scaffold11323 Both SNP 0008.scaffold00029 1149660 1 C A scaffold11323 Both SNP 0008.scaffold00029 1149691 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1150027 2 CA AT scaffold11323 ScafM SNP 0008.scaffold00029 1150731 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1151491 1 T C scaffold11323 ReadM SNP 0008.scaffold00029 1151689 1 A G - ReadM INDEL 0008.scaffold00029 1151692 1 T . - ReadM SNP 0008.scaffold00029 1151723 1 T C - ReadM SNP 0008.scaffold00029 1151764 1 T G - ReadM SNP 0008.scaffold00029 1152001 1 G A - ReadM SNP 0008.scaffold00029 1152254 1 C T - ScafM SNP 0008.scaffold00029 1152533 1 A G scaffold11323 Both SNP 0008.scaffold00029 1152588 1 G A scaffold11323 Both SNP 0008.scaffold00029 1152718 1 C T scaffold11323 Both SNP 0008.scaffold00029 1152811 1 T C scaffold11323 Both SNP 0008.scaffold00029 1152854 1 T C scaffold11323 Both SNP 0008.scaffold00029 1152892 1 T A scaffold11323 Both SNP 0008.scaffold00029 1152916 1 T A scaffold11323 Both SNP 0008.scaffold00029 1152996 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1153287 3 AGG ... scaffold11323 ScafM INDEL 0008.scaffold00029 1153293 1 A . scaffold11323 Both SNP 0008.scaffold00029 1153488 1 G C scaffold11323 Both INDEL 0008.scaffold00029 1153533 1 T . scaffold11323 Both SNP 0008.scaffold00029 1153797 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1154244 1 A T scaffold11323 Both SNP 0008.scaffold00029 1154375 1 T C scaffold11323 Both INDEL 0008.scaffold00029 1154484 2 TG .. scaffold11323 Both INDEL 0008.scaffold00029 1154566 1 T . scaffold11323 Both SNP 0008.scaffold00029 1154774 1 A G scaffold11323 Both SNP 0008.scaffold00029 1154781 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1154807 1 T C scaffold11323 Both SNP 0008.scaffold00029 1154862 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1154883 8 TAAATTTT ........ scaffold11323 ScafM INDEL 0008.scaffold00029 1154936 8 ........ AATGGGTT scaffold11323 Both SNP 0008.scaffold00029 1154995 1 C T scaffold11323 ReadM SNP 0008.scaffold00029 1155060 1 T A - ReadM SNP 0008.scaffold00029 1155085 1 T C - ReadM SNP 0008.scaffold00029 1155095 1 G C - ReadM SNP 0008.scaffold00029 1155184 1 T C - ReadM SNP 0008.scaffold00029 1155263 1 C T - Both SNP 0008.scaffold00029 1155282 1 C T scaffold11323 ReadM SNP 0008.scaffold00029 1155400 1 C T - ReadM SNP 0008.scaffold00029 1155470 1 A G - ReadM SNP 0008.scaffold00029 1159289 1 T C - ReadM SNP 0008.scaffold00029 1159311 1 T C - Both SNP 0008.scaffold00029 1159366 1 A G scaffold11323 Both INDEL 0008.scaffold00029 1159416 1 . G scaffold11323 Both SNP 0008.scaffold00029 1159521 1 C A scaffold11323 Both SNP 0008.scaffold00029 1159561 1 T C scaffold11323 Both SNP 0008.scaffold00029 1159584 1 G A scaffold11323 Both SNP 0008.scaffold00029 1159668 1 A G scaffold11323 ReadM SNP 0008.scaffold00029 1159731 1 C G - ReadM SNP 0008.scaffold00029 1159737 1 A G - ReadM SNP 0008.scaffold00029 1159742 1 G A - ScafM SNP 0008.scaffold00029 1159936 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1159948 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1159968 1 A . scaffold11323 ScafM SNP 0008.scaffold00029 1159979 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1159996 1 T C scaffold11323 ReadM SNP 0008.scaffold00029 1160258 1 A T - ReadM SNP 0008.scaffold00029 1160432 1 A T - ReadM SNP 0008.scaffold00029 1160459 1 C T - ReadM SNP 0008.scaffold00029 1160481 1 C T - ReadM SNP 0008.scaffold00029 1160523 1 G C - ScafM INDEL 0008.scaffold00029 1161049 6 ...... TCTCAT scaffold11323 Both SNP 0008.scaffold00029 1161081 1 C G scaffold11323 Both SNP 0008.scaffold00029 1161414 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1161470 1 G C scaffold11323 Both SNP 0008.scaffold00029 1161504 1 A C scaffold11323 Both SNP 0008.scaffold00029 1161754 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1161844 8 ........ GACGTAGA scaffold11323 ReadM SNP 0008.scaffold00029 1161879 1 T C - ReadM SNP 0008.scaffold00029 1161927 1 G A - ReadM SNP 0008.scaffold00029 1161965 1 G A - Both SNP 0008.scaffold00029 1162132 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1162143 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1162147 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1162161 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1162195 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1162200 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1162233 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1162259 1 T C scaffold11323 ReadM SNP 0008.scaffold00029 1162402 1 T A - ReadM SNP 0008.scaffold00029 1162433 1 T G - Both SNP 0008.scaffold00029 1162527 1 C T scaffold11323 Both SNP 0008.scaffold00029 1162535 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1162624 2 TG CT scaffold11323 Both SNP 0008.scaffold00029 1162653 1 G A scaffold11323 ReadM SNP 0008.scaffold00029 1162925 1 A T - ReadM SNP 0008.scaffold00029 1162936 1 T C - ReadM SNP 0008.scaffold00029 1162988 1 G T - ScafM SNP 0008.scaffold00029 1163044 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1163046 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1163069 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1163114 1 . C scaffold11323 ScafM SNP 0008.scaffold00029 1163148 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1163156 1 . A scaffold11323 ScafM SNP 0008.scaffold00029 1163159 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1163185 2 .. TT scaffold11323 ScafM INDEL 0008.scaffold00029 1163214 38 CTTAACTCTACCCCTCAAAAAAAAAAAAAAAAAAGCTC ...................................... scaffold11323 ScafM INDEL 0008.scaffold00029 1163309 1 . A scaffold11323 ScafM SNP 0008.scaffold00029 1163314 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1163322 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1163335 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1163340 1 T A scaffold11323 ScafM INDEL 0008.scaffold00029 1163376 4 .... TCAC scaffold11323 ScafM SNP 0008.scaffold00029 1163387 2 AA TC scaffold11323 ScafM SNP 0008.scaffold00029 1163401 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1163423 1 C T scaffold11323 ReadM SNP 0008.scaffold00029 1163488 1 T C - ScafM SNP 0008.scaffold00029 1163725 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1163733 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1163775 1 C A scaffold11323 ScafM INDEL 0008.scaffold00029 1163787 10 CCCCTTTTTT .......... scaffold11323 Both SNP 0008.scaffold00029 1163823 1 T G scaffold11323 Both SNP 0008.scaffold00029 1163843 1 C T scaffold11323 Both SNP 0008.scaffold00029 1163861 1 A G scaffold11323 Both SNP 0008.scaffold00029 1163913 1 A G scaffold11323 Both SNP 0008.scaffold00029 1163961 1 G A scaffold11323 Both SNP 0008.scaffold00029 1163966 1 T C scaffold11323 Both SNP 0008.scaffold00029 1163986 1 A G scaffold11323 Both INDEL 0008.scaffold00029 1164062 1 T . scaffold11323 Both SNP 0008.scaffold00029 1164129 1 A T scaffold11323 Both SNP 0008.scaffold00029 1164293 1 C T scaffold11323 Both SNP 0008.scaffold00029 1164350 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1164422 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1164424 1 A C scaffold11323 ScafM SNP 0008.scaffold00029 1164427 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1164442 1 T . scaffold11323 Both SNP 0008.scaffold00029 1164490 1 G C scaffold11323 Both SNP 0008.scaffold00029 1164513 1 T G scaffold11323 Both SNP 0008.scaffold00029 1164542 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1164618 1 T C scaffold11323 Both INDEL 0008.scaffold00029 1164733 2 AT .. scaffold11323 Both SNP 0008.scaffold00029 1164743 1 G T scaffold11323 Both SNP 0008.scaffold00029 1164792 1 G A scaffold11323 Both SNP 0008.scaffold00029 1164872 1 T A scaffold11323 Both SNP 0008.scaffold00029 1164918 1 G A scaffold11323 Both SNP 0008.scaffold00029 1164970 1 T G scaffold11323 Both SNP 0008.scaffold00029 1165012 1 T C scaffold11323 Both SNP 0008.scaffold00029 1165020 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1165043 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1165061 1 C T scaffold11323 ScafM INDEL 0008.scaffold00029 1165068 3 TTT ... scaffold11323 ScafM SNP 0008.scaffold00029 1165084 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1165089 1 C T scaffold11323 Both SNP 0008.scaffold00029 1165165 1 G T scaffold11323 Both SNP 0008.scaffold00029 1165237 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1165269 1 T A scaffold11323 Both INDEL 0008.scaffold00029 1165271 1 A . scaffold11323 Both SNP 0008.scaffold00029 1165306 1 G C scaffold11323 Both SNP 0008.scaffold00029 1165434 1 C T scaffold11323 Both SNP 0008.scaffold00029 1165437 1 T G scaffold11323 Both SNP 0008.scaffold00029 1165445 1 G A scaffold11323 Both INDEL 0008.scaffold00029 1165512 1 . A scaffold11323 Both SNP 0008.scaffold00029 1165563 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1165633 3 TGG CTC scaffold11323 ScafM SNP 0008.scaffold00029 1165668 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1165678 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1165709 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1165711 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1165725 12 ............ GGCAATTTAAAG scaffold11323 ScafM SNP 0008.scaffold00029 1165734 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1165746 1 T C scaffold11323 Both INDEL 0008.scaffold00029 1165765 1 . T scaffold11323 Both SNP 0008.scaffold00029 1165784 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1165847 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1165861 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1165864 2 TT .G scaffold11323 ScafM INDEL 0008.scaffold00029 1165875 4 .... TCAC scaffold11323 Both SNP 0008.scaffold00029 1165897 1 C T scaffold11323 Both SNP 0008.scaffold00029 1165914 1 T C scaffold11323 Both SNP 0008.scaffold00029 1165936 1 G A scaffold11323 ReadM SNP 0008.scaffold00029 1166077 1 C T - ReadM SNP 0008.scaffold00029 1166144 1 G A - ReadM SNP 0008.scaffold00029 1166160 1 T C - ReadM SNP 0008.scaffold00029 1166180 1 T A - ReadM SNP 0008.scaffold00029 1166432 1 A G - ReadM SNP 0008.scaffold00029 1166478 1 G A - ReadM SNP 0008.scaffold00029 1166611 1 C T - ReadM INDEL 0008.scaffold00029 1166622 1 T . - ReadM SNP 0008.scaffold00029 1166635 1 G C - ReadM SNP 0008.scaffold00029 1166663 1 T C - ReadM SNP 0008.scaffold00029 1166752 1 T C - ScafM SNP 0008.scaffold00029 1167051 2 TA CG scaffold11323 ScafM SNP 0008.scaffold00029 1167062 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1167072 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1167090 1 . T scaffold11323 ScafM SNP 0008.scaffold00029 1167093 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1167104 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1167116 3 AAA ... scaffold11323 ScafM SNP 0008.scaffold00029 1167139 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1167155 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1167163 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1167189 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1167221 1 A . scaffold11323 ScafM SNP 0008.scaffold00029 1167262 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1167284 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1167286 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1167315 1 . T scaffold11323 ScafM INDEL 0008.scaffold00029 1167317 5 ..... CGAAC scaffold11323 ScafM INDEL 0008.scaffold00029 1167319 1 . G scaffold11323 ScafM SNP 0008.scaffold00029 1167323 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1167326 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1167338 1 A C scaffold11323 ScafM SNP 0008.scaffold00029 1167351 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1167418 2 CC TG scaffold11323 ScafM SNP 0008.scaffold00029 1167422 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1167426 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1167488 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1167492 1 A C scaffold11323 ScafM SNP 0008.scaffold00029 1167500 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1167508 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1167532 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1167546 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1167667 1 . T scaffold11323 ScafM SNP 0008.scaffold00029 1167715 1 T C scaffold11323 ScafM INDEL 0008.scaffold00029 1167739 2 .. TT scaffold11323 ScafM SNP 0008.scaffold00029 1167749 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1167804 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1167826 1 G A scaffold11323 Both SNP 0008.scaffold00029 1167854 1 T C scaffold11323 Both SNP 0008.scaffold00029 1167982 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1168075 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1168112 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1168117 1 A T scaffold11323 Both SNP 0008.scaffold00029 1168188 1 G C scaffold11323 Both SNP 0008.scaffold00029 1168207 1 C T scaffold11323 Both SNP 0008.scaffold00029 1168236 1 G C scaffold11323 Both INDEL 0008.scaffold00029 1168268 1 . G scaffold11323 Both SNP 0008.scaffold00029 1168363 1 G C scaffold11323 Both SNP 0008.scaffold00029 1168413 1 G T scaffold11323 Both SNP 0008.scaffold00029 1168467 1 G A scaffold11323 Both SNP 0008.scaffold00029 1168487 1 C T scaffold11323 ScafM INDEL 0008.scaffold00029 1168500 5 ..... TTGTT scaffold11323 ScafM SNP 0008.scaffold00029 1168542 1 C A scaffold11323 ScafM INDEL 0008.scaffold00029 1168554 4 .... CTTA scaffold11323 ScafM SNP 0008.scaffold00029 1168562 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1168573 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1168612 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1168618 1 G C scaffold11323 Both SNP 0008.scaffold00029 1168634 1 T A scaffold11323 Both SNP 0008.scaffold00029 1168679 1 G A scaffold11323 Both SNP 0008.scaffold00029 1168716 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1168723 1 G C scaffold11323 Both SNP 0008.scaffold00029 1168738 1 T G scaffold11323 Both SNP 0008.scaffold00029 1168742 1 T A scaffold11323 Both SNP 0008.scaffold00029 1168833 1 T C scaffold11323 Both SNP 0008.scaffold00029 1168843 1 G T scaffold11323 Both INDEL 0008.scaffold00029 1168883 1 . C scaffold11323 Both INDEL 0008.scaffold00029 1168930 1 C . scaffold11323 Both SNP 0008.scaffold00029 1169003 1 G A scaffold11323 Both SNP 0008.scaffold00029 1169147 1 A T scaffold11323 Both SNP 0008.scaffold00029 1169254 1 T A scaffold11323 Both SNP 0008.scaffold00029 1169277 1 T A scaffold11323 Both SNP 0008.scaffold00029 1169359 1 C T scaffold11323 Both SNP 0008.scaffold00029 1169391 1 G A scaffold11323 Both SNP 0008.scaffold00029 1169402 1 C G scaffold11323 ScafM SNP 0008.scaffold00029 1169461 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1169468 2 GA TT scaffold11323 ScafM SNP 0008.scaffold00029 1169471 2 TA GT scaffold11323 Both SNP 0008.scaffold00029 1169559 2 GT AC scaffold11323 Both INDEL 0008.scaffold00029 1169650 2 TA .. scaffold11323 ScafM SNP 0008.scaffold00029 1169764 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1169856 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1169916 2 GA TG scaffold11323 ScafM SNP 0008.scaffold00029 1169923 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1169944 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1169946 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1169990 1 T C scaffold11323 ScafM INDEL 0008.scaffold00029 1170003 3 GAA ... scaffold11323 ScafM SNP 0008.scaffold00029 1170032 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1171180 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1171197 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1171235 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1171244 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1171436 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1171460 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1171472 2 CA TT scaffold11323 ScafM SNP 0008.scaffold00029 1171486 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1171547 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1171572 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1171587 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1171624 1 G C scaffold11323 ScafM INDEL 0008.scaffold00029 1171837 2 TC .. scaffold5544 ScafM INDEL 0008.scaffold00029 1171871 6 CCACCT ...... scaffold5544 ScafM SNP 0008.scaffold00029 1171881 1 A G scaffold5544 ScafM INDEL 0008.scaffold00029 1171900 8 CAATTCTC ........ scaffold5544 ScafM INDEL 0008.scaffold00029 1171985 1 C . scaffold5544 ScafM SNP 0008.scaffold00029 1171988 1 C A scaffold5544 ScafM INDEL 0008.scaffold00029 1171996 3 GTG ... scaffold5544 ScafM SNP 0008.scaffold00029 1178835 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1178863 6 ...... TAATTA scaffold11323 ScafM SNP 0008.scaffold00029 1178885 1 T C scaffold11323 ScafM INDEL 0008.scaffold00029 1178912 11 ........... TGCATTCTCTC scaffold11323 ScafM SNP 0008.scaffold00029 1178934 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1178956 4 .... TAAT scaffold11323 ScafM SNP 0008.scaffold00029 1179001 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1179092 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1179095 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1179147 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1179154 1 G A scaffold11323 ReadM SNP 0008.scaffold00029 1179334 1 C T - ReadM SNP 0008.scaffold00029 1181709 1 T G - ScafM SNP 0008.scaffold00029 1181775 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1181817 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1181841 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1182050 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1182084 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1182089 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1182114 1 . C scaffold11323 ScafM SNP 0008.scaffold00029 1182116 1 G T scaffold11323 ScafM INDEL 0008.scaffold00029 1182262 12 ............ TTATTTTTATTT scaffold11323 ScafM SNP 0008.scaffold00029 1182303 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1182358 1 T A scaffold11323 ScafM INDEL 0008.scaffold00029 1182388 6 ...... CTCCCT scaffold11323 ScafM SNP 0008.scaffold00029 1182456 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1182631 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1182732 1 G C scaffold11323 Both SNP 0008.scaffold00029 1182757 1 G T scaffold11323 Both SNP 0008.scaffold00029 1182799 1 C T scaffold11323 Both SNP 0008.scaffold00029 1182900 1 C T scaffold11323 Both INDEL 0008.scaffold00029 1182917 1 . T scaffold11323 Both SNP 0008.scaffold00029 1182928 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1182949 1 T C scaffold11323 ScafM INDEL 0008.scaffold00029 1182955 6 ...... TTGAAG scaffold11323 ScafM INDEL 0008.scaffold00029 1182988 8 ACTTGATG ........ scaffold11323 ScafM SNP 0008.scaffold00029 1183014 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1183028 1 C A scaffold11323 ScafM INDEL 0008.scaffold00029 1183364 1 . C scaffold11323 ScafM SNP 0008.scaffold00029 1183386 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1183412 1 C T scaffold11323 Both SNP 0008.scaffold00029 1183503 1 C G scaffold11323 Both SNP 0008.scaffold00029 1183524 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1183556 1 C G scaffold11323 ScafM SNP 0008.scaffold00029 1183566 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1183582 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1183588 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1184020 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1184028 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1184030 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1184035 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1184041 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1184051 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1184071 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1184077 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1184112 2 TC GT scaffold11323 ScafM SNP 0008.scaffold00029 1184127 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1184132 1 . T scaffold11323 ScafM INDEL 0008.scaffold00029 1184153 2 AT .G scaffold11323 ScafM SNP 0008.scaffold00029 1184183 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1184186 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1184276 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1184287 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1184295 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1184299 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1184546 1 A C scaffold11323 ScafM INDEL 0008.scaffold00029 1184578 1 T . scaffold11323 ScafM SNP 0008.scaffold00029 1184606 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1184651 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1184715 2 GT AC scaffold11323 ScafM SNP 0008.scaffold00029 1185797 1 C G scaffold11323 ScafM SNP 0008.scaffold00029 1185801 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1185809 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1185835 1 G C scaffold11323 ScafM INDEL 0008.scaffold00029 1185899 2 .. AC scaffold11323 ScafM SNP 0008.scaffold00029 1185926 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1185934 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1185941 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1185947 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1186046 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186104 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1186118 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1186134 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1186137 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186147 2 CA TG scaffold11323 ScafM SNP 0008.scaffold00029 1186158 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1186186 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1186214 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186219 1 C G scaffold11323 ScafM SNP 0008.scaffold00029 1186224 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1186239 1 A C scaffold11323 ScafM SNP 0008.scaffold00029 1186245 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1186248 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1186264 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186277 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1186291 1 . A scaffold11323 ScafM SNP 0008.scaffold00029 1186304 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1186373 1 G C scaffold11323 ScafM SNP 0008.scaffold00029 1186382 2 TT AG scaffold11323 ScafM SNP 0008.scaffold00029 1186423 1 C A scaffold11323 ScafM SNP 0008.scaffold00029 1186499 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1186513 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186516 1 G A scaffold11323 ScafM INDEL 0008.scaffold00029 1186523 2 AC .. scaffold11323 Both INDEL 0008.scaffold00029 1186538 1 . C scaffold11323 Both SNP 0008.scaffold00029 1186550 1 A G scaffold11323 Both SNP 0008.scaffold00029 1186684 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186713 2 CA AC scaffold11323 ScafM SNP 0008.scaffold00029 1186719 1 A T scaffold11323 ScafM INDEL 0008.scaffold00029 1186723 1 . A scaffold11323 ScafM SNP 0008.scaffold00029 1186746 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1186757 1 A G scaffold11323 ScafM SNP 0008.scaffold00029 1186768 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1186791 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1186796 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1186806 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1186856 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1186861 1 . T scaffold11323 ScafM SNP 0008.scaffold00029 1186882 1 A C scaffold11323 ScafM SNP 0008.scaffold00029 1186901 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1186950 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1186957 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1186973 1 G T scaffold11323 ScafM SNP 0008.scaffold00029 1186982 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1187055 1 C T scaffold11323 ScafM INDEL 0008.scaffold00029 1187057 2 AC .. scaffold11323 ScafM SNP 0008.scaffold00029 1187083 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1187085 1 T G scaffold11323 Both SNP 0008.scaffold00029 1187103 1 A G scaffold11323 Both SNP 0008.scaffold00029 1187170 1 T C scaffold11323 Both SNP 0008.scaffold00029 1187180 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1187224 25 ......................... TGTATGTTGGCAAACTTGAAAGAGG scaffold11323 ScafM SNP 0008.scaffold00029 1187233 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1187247 1 A G scaffold11323 ScafM INDEL 0008.scaffold00029 1187262 2 .C GG scaffold11323 ScafM SNP 0008.scaffold00029 1187273 2 GG AA scaffold11323 ScafM SNP 0008.scaffold00029 1187290 1 C T scaffold11323 ScafM SNP 0008.scaffold00029 1187301 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1187325 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1187350 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1187365 1 T G scaffold11323 ScafM SNP 0008.scaffold00029 1187376 1 T A scaffold11323 ScafM INDEL 0008.scaffold00029 1187433 1 G . scaffold11323 ScafM SNP 0008.scaffold00029 1187439 1 T C scaffold11323 ScafM SNP 0008.scaffold00029 1187463 1 A T scaffold11323 ScafM SNP 0008.scaffold00029 1187476 1 T A scaffold11323 ScafM SNP 0008.scaffold00029 1187532 1 C G scaffold11323 ScafM INDEL 0008.scaffold00029 1187574 2 GA .. scaffold11323 ScafM SNP 0008.scaffold00029 1187610 1 G A scaffold11323 ScafM SNP 0008.scaffold00029 1189400 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189444 1 G A scaffold16536 ScafM INDEL 0008.scaffold00029 1189494 1 T . scaffold16536 ScafM SNP 0008.scaffold00029 1189502 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189515 1 T C scaffold16536 ScafM SNP 0008.scaffold00029 1189526 1 C T scaffold16536 ScafM SNP 0008.scaffold00029 1189587 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189597 1 C G scaffold16536 ScafM SNP 0008.scaffold00029 1189626 1 C T scaffold16536 ScafM SNP 0008.scaffold00029 1189671 1 G A scaffold16536 ScafM SNP 0008.scaffold00029 1189673 1 C T scaffold16536 ScafM SNP 0008.scaffold00029 1189692 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189695 2 CT AC scaffold16536 ScafM SNP 0008.scaffold00029 1189701 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189717 1 G T scaffold16536 ScafM SNP 0008.scaffold00029 1189754 1 C T scaffold16536 ScafM SNP 0008.scaffold00029 1189765 1 T C scaffold16536 ScafM SNP 0008.scaffold00029 1189768 1 G C scaffold16536 ScafM INDEL 0008.scaffold00029 1189841 1 . C scaffold16536 ScafM SNP 0008.scaffold00029 1189843 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189846 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189864 1 C A scaffold16536 ScafM SNP 0008.scaffold00029 1189872 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1189874 1 G A scaffold16536 Both SNP 0008.scaffold00029 1189927 1 A G scaffold16536 Both SNP 0008.scaffold00029 1189975 1 C T scaffold16536 Both SNP 0008.scaffold00029 1189978 1 G A scaffold16536 Both SNP 0008.scaffold00029 1190003 1 T C scaffold16536 Both SNP 0008.scaffold00029 1190076 1 C G scaffold16536 Both SNP 0008.scaffold00029 1190145 1 A G scaffold16536 Both SNP 0008.scaffold00029 1190208 1 T A scaffold16536 Both SNP 0008.scaffold00029 1190223 1 G A scaffold16536 Both SNP 0008.scaffold00029 1190235 1 T A scaffold16536 ScafM SNP 0008.scaffold00029 1190263 1 G T scaffold16536 ScafM SNP 0008.scaffold00029 1190269 1 C A scaffold16536 ScafM SNP 0008.scaffold00029 1190272 1 T A scaffold16536 ScafM SNP 0008.scaffold00029 1190279 1 C G scaffold16536 ScafM SNP 0008.scaffold00029 1190292 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1190297 1 T A scaffold16536 ScafM SNP 0008.scaffold00029 1190312 1 A C scaffold16536 ScafM SNP 0008.scaffold00029 1190350 1 G A scaffold16536 ScafM INDEL 0008.scaffold00029 1190354 3 ... ATT scaffold16536 ScafM SNP 0008.scaffold00029 1190358 1 T C scaffold16536 Both SNP 0008.scaffold00029 1190382 1 T A scaffold16536 Both SNP 0008.scaffold00029 1190420 1 A G scaffold16536 Both SNP 0008.scaffold00029 1190429 1 G T scaffold16536 ScafM SNP 0008.scaffold00029 1190562 1 T C scaffold16536 ScafM SNP 0008.scaffold00029 1190565 2 GG CT scaffold16536 ScafM SNP 0008.scaffold00029 1190589 1 C A scaffold16536 ScafM INDEL 0008.scaffold00029 1190596 3 ... TCA scaffold16536 ScafM SNP 0008.scaffold00029 1190608 1 A G scaffold16536 ScafM SNP 0008.scaffold00029 1190612 1 T G scaffold16536 ScafM INDEL 0008.scaffold00029 1190616 1 A . scaffold16536 ScafM INDEL 0008.scaffold00029 1190625 6 CTAACA ...... scaffold16536 ScafM SNP 0008.scaffold00029 1190633 1 A T scaffold16536 Both SNP 0008.scaffold00029 1190687 1 G A scaffold16536 Both SNP 0008.scaffold00029 1190709 1 T C scaffold16536 Both INDEL 0008.scaffold00029 1190796 1 A . scaffold16536 Both SNP 0008.scaffold00029 1190816 1 A G scaffold16536 Both SNP 0008.scaffold00029 1190910 1 T C scaffold16536 Both SNP 0008.scaffold00029 1190945 1 T C scaffold16536 Both SNP 0008.scaffold00029 1190947 1 T A scaffold16536 Both SNP 0008.scaffold00029 1190949 1 G C scaffold16536 ScafM SNP 0008.scaffold00029 1191101 1 G A scaffold16536 Both SNP 0008.scaffold00029 1191153 1 A C scaffold16536 Both SNP 0008.scaffold00029 1191290 1 T C scaffold16536 Both SNP 0008.scaffold00029 1191470 1 A G scaffold16536 Both SNP 0008.scaffold00029 1191592 1 C G scaffold16536 ScafM INDEL 0008.scaffold00029 1191782 3 TTT ... scaffold16536 Both SNP 0008.scaffold00029 1191903 1 T G scaffold16536 Both SNP 0008.scaffold00029 1192052 1 G A scaffold16536 Both SNP 0008.scaffold00029 1192066 1 A G scaffold16536 Both SNP 0008.scaffold00029 1192242 1 G T scaffold16536 Both SNP 0008.scaffold00029 1192254 1 A T scaffold16536 Both INDEL 0008.scaffold00029 1192290 1 T . scaffold16536 Both SNP 0008.scaffold00029 1192300 1 A G scaffold16536 ReadM SNP 0008.scaffold00029 1192358 1 A G - ReadM SNP 0008.scaffold00029 1192392 1 T A - ReadM INDEL 0008.scaffold00029 1192408 1 . A - ReadM SNP 0008.scaffold00029 1192440 1 G A - ReadM SNP 0008.scaffold00029 1192443 1 T C - ReadM SNP 0008.scaffold00029 1192488 1 T C - ReadM SNP 0008.scaffold00029 1192605 1 C A - ReadM SNP 0008.scaffold00029 1192631 1 A C - ReadM SNP 0008.scaffold00029 1192655 1 A C - ReadM SNP 0008.scaffold00029 1192682 1 A G - ReadM SNP 0008.scaffold00029 1192706 1 T A - ReadM SNP 0008.scaffold00029 1192813 1 T C - ReadM SNP 0008.scaffold00029 1193192 1 A G - ReadM INDEL 0008.scaffold00029 1193421 1 G . - ReadM SNP 0008.scaffold00029 1193512 1 A G - ReadM SNP 0008.scaffold00029 1193533 1 T G - ReadM SNP 0008.scaffold00029 1193535 1 T C - ReadM SNP 0008.scaffold00029 1193668 1 A G - ReadM SNP 0008.scaffold00029 1193864 1 C G - ReadM SNP 0008.scaffold00029 1193928 1 A G - Both SNP 0008.scaffold00029 1194009 1 C T scaffold16536 ReadM SNP 0008.scaffold00029 1194067 1 T C - ReadM SNP 0008.scaffold00029 1194192 1 A C - ReadM SNP 0008.scaffold00029 1194234 1 T C - ReadM SNP 0008.scaffold00029 1194294 1 C T - ReadM INDEL 0008.scaffold00029 1194368 3 ... AAT - ReadM SNP 0008.scaffold00029 1194414 1 C T - ReadM SNP 0008.scaffold00029 1194480 1 C T - ReadM SNP 0008.scaffold00029 1194556 1 T C - ReadM SNP 0008.scaffold00029 1194670 1 T C - ReadM SNP 0008.scaffold00029 1194720 1 G A - Both SNP 0008.scaffold00029 1194906 1 T A scaffold16536 ReadM INDEL 0008.scaffold00029 1194949 1 . T - ReadM SNP 0008.scaffold00029 1195002 1 C T - Both SNP 0008.scaffold00029 1195089 1 A G scaffold16536 ReadM SNP 0008.scaffold00029 1195213 1 A G - ReadM SNP 0008.scaffold00029 1195267 1 G A - ReadM SNP 0008.scaffold00029 1195305 1 A G - ReadM SNP 0008.scaffold00029 1195449 1 C T - ReadM SNP 0008.scaffold00029 1195467 1 T A - Both INDEL 0008.scaffold00029 1195789 1 . C scaffold16536 Both INDEL 0008.scaffold00029 1195814 1 G . scaffold16536 Both SNP 0008.scaffold00029 1195987 1 C T scaffold16536 Both INDEL 0008.scaffold00029 1196087 1 A . scaffold16536 ScafM SNP 0008.scaffold00029 1196101 2 AA TT scaffold16536 Both SNP 0008.scaffold00029 1196268 1 T C scaffold16536 Both SNP 0008.scaffold00029 1196295 1 A G scaffold16536 Both SNP 0008.scaffold00029 1196309 1 T C scaffold16536 Both SNP 0008.scaffold00029 1196361 1 G A scaffold16536 ScafM INDEL 0008.scaffold00029 1196401 1 . A scaffold16536 ReadM INDEL 0008.scaffold00029 1196402 1 . T - Both SNP 0008.scaffold00029 1196435 1 T C scaffold16536 Both SNP 0008.scaffold00029 1196440 1 C T scaffold16536 Both INDEL 0008.scaffold00029 1196530 1 G . scaffold16536 Both SNP 0008.scaffold00029 1196595 1 T G scaffold16536 Both SNP 0008.scaffold00029 1196718 1 A C scaffold16536 Both SNP 0008.scaffold00029 1196798 1 T C scaffold16536 ReadM SNP 0008.scaffold00029 1196930 1 T G - ReadM SNP 0008.scaffold00029 1196936 1 C T - ReadM SNP 0008.scaffold00029 1196956 1 T C - ReadM SNP 0008.scaffold00029 1197042 1 C T - ReadM SNP 0008.scaffold00029 1197063 1 T C - ReadM SNP 0008.scaffold00029 1197107 1 G A - ReadM SNP 0008.scaffold00029 1197260 1 T C - ReadM SNP 0008.scaffold00029 1197328 1 G A - ReadM SNP 0008.scaffold00029 1197456 1 A G - ReadM SNP 0008.scaffold00029 1197650 1 G T - ReadM SNP 0008.scaffold00029 1197706 1 C T - ReadM SNP 0008.scaffold00029 1197836 1 T C - ReadM SNP 0008.scaffold00029 1197888 1 G A - ReadM SNP 0008.scaffold00029 1198174 1 A T - ReadM SNP 0008.scaffold00029 1198213 1 G A - ReadM SNP 0008.scaffold00029 1198233 1 C G - ReadM SNP 0008.scaffold00029 1198490 1 T G - ReadM SNP 0008.scaffold00029 1198621 1 A C - ReadM SNP 0008.scaffold00029 1198664 1 T C - ReadM SNP 0008.scaffold00029 1198727 1 G A - ReadM SNP 0008.scaffold00029 1198740 1 G A - ReadM SNP 0008.scaffold00029 1198816 1 T C - ReadM SNP 0008.scaffold00029 1198830 1 C A - ReadM SNP 0008.scaffold00029 1198868 1 C G - ScafM SNP 0008.scaffold00029 1199788 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1199803 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1199907 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1199957 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1200108 1 C T scaffold27371 Both SNP 0008.scaffold00029 1200143 1 A G scaffold27371 Both SNP 0008.scaffold00029 1200180 1 A G scaffold27371 Both INDEL 0008.scaffold00029 1200249 2 .. AT scaffold27371 Both SNP 0008.scaffold00029 1200316 1 A C scaffold27371 Both SNP 0008.scaffold00029 1200486 1 T A scaffold27371 Both SNP 0008.scaffold00029 1200499 1 A C scaffold27371 ReadM INDEL 0008.scaffold00029 1200514 1 . A - ReadM SNP 0008.scaffold00029 1200592 1 G A - ReadM SNP 0008.scaffold00029 1200626 1 A C - ReadM SNP 0008.scaffold00029 1200639 1 G C - ReadM SNP 0008.scaffold00029 1200683 1 T C - ReadM SNP 0008.scaffold00029 1200724 1 T A - ScafM INDEL 0008.scaffold00029 1201109 3 CAA ... scaffold27371 ScafM SNP 0008.scaffold00029 1201143 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1201160 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1201183 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1201196 1 T A scaffold27371 Both SNP 0008.scaffold00029 1201249 1 A G scaffold27371 Both SNP 0008.scaffold00029 1201252 1 G A scaffold27371 Both SNP 0008.scaffold00029 1201352 1 G T scaffold27371 Both SNP 0008.scaffold00029 1201360 1 A G scaffold27371 ReadM SNP 0008.scaffold00029 1201573 1 C G - ReadM SNP 0008.scaffold00029 1201663 1 G A - Both SNP 0008.scaffold00029 1201737 1 G T scaffold27371 Both SNP 0008.scaffold00029 1201801 1 A G scaffold27371 Both INDEL 0008.scaffold00029 1201973 1 C . scaffold27371 ScafM SNP 0008.scaffold00029 1201991 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1201993 1 C G scaffold27371 ReadM SNP 0008.scaffold00029 1202195 1 C A - ScafM SNP 0008.scaffold00029 1203309 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1203318 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1203333 1 C T scaffold27371 Both SNP 0008.scaffold00029 1203374 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1203440 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1203514 1 A T scaffold27371 ScafM INDEL 0008.scaffold00029 1203557 3 ATA ... scaffold27371 ScafM INDEL 0008.scaffold00029 1203562 1 G . scaffold27371 ScafM INDEL 0008.scaffold00029 1203660 1 . A scaffold27371 ScafM SNP 0008.scaffold00029 1203667 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1203691 1 C T scaffold27371 ScafM INDEL 0008.scaffold00029 1203811 4 .... AATT scaffold27371 ScafM SNP 0008.scaffold00029 1203828 1 T A scaffold27371 ScafM INDEL 0008.scaffold00029 1203866 1 . A scaffold27371 ScafM SNP 0008.scaffold00029 1203881 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1204028 1 G C scaffold27371 Both INDEL 0008.scaffold00029 1204190 1 . T scaffold27371 ScafM SNP 0008.scaffold00029 1204474 1 A G scaffold27371 Both SNP 0008.scaffold00029 1204583 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1204621 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1204626 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1204698 1 A C scaffold27371 ScafM INDEL 0008.scaffold00029 1204725 5 ..... TTTTT scaffold27371 Both INDEL 0008.scaffold00029 1204779 1 . G scaffold27371 ScafM SNP 0008.scaffold00029 1204786 1 T A scaffold27371 Both SNP 0008.scaffold00029 1204897 1 G C scaffold27371 Both SNP 0008.scaffold00029 1205047 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1205100 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1205132 1 . A scaffold27371 ScafM SNP 0008.scaffold00029 1205163 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1205198 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1205261 1 A T scaffold27371 ScafM INDEL 0008.scaffold00029 1205293 13 ............. CATTACAACATTT scaffold27371 ScafM INDEL 0008.scaffold00029 1205345 1 . G scaffold27371 Both INDEL 0008.scaffold00029 1205371 1 T . scaffold27371 Both SNP 0008.scaffold00029 1205380 1 A T scaffold27371 Both SNP 0008.scaffold00029 1205571 1 T C scaffold27371 Both SNP 0008.scaffold00029 1205609 1 T C scaffold27371 ScafM INDEL 0008.scaffold00029 1205762 6 ...... GGTTGT scaffold27371 ReadM SNP 0008.scaffold00029 1205777 1 C T - Both SNP 0008.scaffold00029 1205856 1 A G scaffold27371 Both SNP 0008.scaffold00029 1206011 1 A G scaffold27371 Both INDEL 0008.scaffold00029 1206151 1 C . scaffold27371 ScafM SNP 0008.scaffold00029 1206153 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1206163 1 A T scaffold27371 Both SNP 0008.scaffold00029 1206219 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1206396 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1206405 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1206413 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1206419 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1206425 1 C G scaffold27371 ScafM SNP 0008.scaffold00029 1206500 1 A C scaffold27371 ScafM SNP 0008.scaffold00029 1206721 1 A T scaffold27371 ScafM INDEL 0008.scaffold00029 1206759 1 . T scaffold27371 ReadM SNP 0008.scaffold00029 1207570 1 T A - ReadM SNP 0008.scaffold00029 1207630 1 C T - ReadM SNP 0008.scaffold00029 1207730 1 C T - ReadM SNP 0008.scaffold00029 1207905 1 T G - ReadM SNP 0008.scaffold00029 1207930 1 C T - ReadM SNP 0008.scaffold00029 1207993 1 A G - ReadM INDEL 0008.scaffold00029 1208153 3 ... TGG - ReadM INDEL 0008.scaffold00029 1208265 1 T . - ReadM SNP 0008.scaffold00029 1208291 1 T C - ReadM SNP 0008.scaffold00029 1208392 1 T G - ReadM SNP 0008.scaffold00029 1208413 1 G A - ReadM SNP 0008.scaffold00029 1208604 1 A G - ScafM INDEL 0008.scaffold00029 1208655 3 ... TAG scaffold27371 ScafM INDEL 0008.scaffold00029 1208656 2 .. TC scaffold27371 ReadM SNP 0008.scaffold00029 1208720 1 A T - ReadM SNP 0008.scaffold00029 1208782 1 T C - ReadM SNP 0008.scaffold00029 1209159 1 A C - ReadM SNP 0008.scaffold00029 1209244 1 G A - Both SNP 0008.scaffold00029 1209314 1 A G scaffold27371 Both SNP 0008.scaffold00029 1209571 1 C A scaffold27371 Both SNP 0008.scaffold00029 1209609 1 G A scaffold27371 Both SNP 0008.scaffold00029 1209638 1 T C scaffold27371 Both SNP 0008.scaffold00029 1209694 1 A C scaffold27371 ReadM SNP 0008.scaffold00029 1209726 1 G A - ReadM SNP 0008.scaffold00029 1209818 1 T C - Both SNP 0008.scaffold00029 1209885 1 G A scaffold27371 Both SNP 0008.scaffold00029 1209895 1 A G scaffold27371 Both SNP 0008.scaffold00029 1209967 1 A T scaffold27371 Both SNP 0008.scaffold00029 1210036 1 T G scaffold27371 Both SNP 0008.scaffold00029 1210100 1 T C scaffold27371 Both SNP 0008.scaffold00029 1210105 1 G A scaffold27371 Both SNP 0008.scaffold00029 1210116 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1210188 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1210202 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1210214 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1210217 2 GT AA scaffold27371 Both SNP 0008.scaffold00029 1210402 1 A G scaffold27371 Both SNP 0008.scaffold00029 1210447 1 C T scaffold27371 Both SNP 0008.scaffold00029 1210525 1 T C scaffold27371 Both SNP 0008.scaffold00029 1210530 1 T A scaffold27371 Both SNP 0008.scaffold00029 1210558 1 A C scaffold27371 Both SNP 0008.scaffold00029 1210561 1 A G scaffold27371 Both SNP 0008.scaffold00029 1210585 1 G A scaffold27371 Both SNP 0008.scaffold00029 1210667 1 A G scaffold27371 Both SNP 0008.scaffold00029 1210693 1 C T scaffold27371 Both SNP 0008.scaffold00029 1210709 1 A C scaffold27371 ScafM SNP 0008.scaffold00029 1210876 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1210918 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1210944 3 TAT ... scaffold27371 Both SNP 0008.scaffold00029 1211035 1 T G scaffold27371 Both SNP 0008.scaffold00029 1211088 1 C G scaffold27371 Both SNP 0008.scaffold00029 1211091 1 G T scaffold27371 Both SNP 0008.scaffold00029 1211191 1 C T scaffold27371 Both SNP 0008.scaffold00029 1211221 1 G A scaffold27371 Both SNP 0008.scaffold00029 1211249 1 G A scaffold27371 Both SNP 0008.scaffold00029 1211299 1 A G scaffold27371 Both SNP 0008.scaffold00029 1211307 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1211358 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1211392 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1211454 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1211483 1 T G scaffold27371 Both SNP 0008.scaffold00029 1211558 1 T A scaffold27371 Both SNP 0008.scaffold00029 1211576 1 G T scaffold27371 Both SNP 0008.scaffold00029 1211583 1 C T scaffold27371 Both SNP 0008.scaffold00029 1211684 1 G T scaffold27371 Both SNP 0008.scaffold00029 1211716 1 T G scaffold27371 Both SNP 0008.scaffold00029 1211871 1 A G scaffold27371 Both SNP 0008.scaffold00029 1211933 1 G A scaffold27371 Both SNP 0008.scaffold00029 1212221 1 A G scaffold27371 ScafM INDEL 0008.scaffold00029 1212328 5 GATCT ..... scaffold27371 Both SNP 0008.scaffold00029 1212419 1 C T scaffold27371 ScafM INDEL 0008.scaffold00029 1212431 2 TA .. scaffold27371 ScafM SNP 0008.scaffold00029 1212447 1 T C scaffold27371 Both SNP 0008.scaffold00029 1212480 1 A G scaffold27371 Both SNP 0008.scaffold00029 1212583 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1212726 1 A G scaffold27371 Both SNP 0008.scaffold00029 1212733 1 G C scaffold27371 Both SNP 0008.scaffold00029 1212800 1 G A scaffold27371 Both INDEL 0008.scaffold00029 1212874 1 . A scaffold27371 Both SNP 0008.scaffold00029 1212896 1 C T scaffold27371 Both SNP 0008.scaffold00029 1212928 1 C T scaffold27371 Both SNP 0008.scaffold00029 1212933 1 G A scaffold27371 Both SNP 0008.scaffold00029 1212991 1 G A scaffold27371 Both SNP 0008.scaffold00029 1213117 1 G T scaffold27371 Both SNP 0008.scaffold00029 1213165 1 T A scaffold27371 ReadM SNP 0008.scaffold00029 1213242 1 T C - ReadM SNP 0008.scaffold00029 1213268 1 C A - ReadM SNP 0008.scaffold00029 1213287 1 T A - ReadM SNP 0008.scaffold00029 1213301 1 A G - ReadM INDEL 0008.scaffold00029 1213386 2 .. AT - Both SNP 0008.scaffold00029 1213431 2 CC TT scaffold27371 Both SNP 0008.scaffold00029 1213499 1 C T scaffold27371 Both SNP 0008.scaffold00029 1213505 1 C T scaffold27371 Both SNP 0008.scaffold00029 1213536 1 G T scaffold27371 Both SNP 0008.scaffold00029 1213556 1 A C scaffold27371 Both INDEL 0008.scaffold00029 1213572 1 . T scaffold27371 ScafM INDEL 0008.scaffold00029 1213668 24 ........................ GATAAAGTTTCACCCCCTGACCCG scaffold27371 ScafM INDEL 0008.scaffold00029 1213669 3 ... GTG scaffold27371 Both INDEL 0008.scaffold00029 1213744 2 .. AT scaffold27371 Both SNP 0008.scaffold00029 1213793 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1213839 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1213854 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1213893 1 C G scaffold27371 ScafM SNP 0008.scaffold00029 1213911 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1213927 1 C T scaffold27371 ReadM SNP 0008.scaffold00029 1214996 1 A G - ReadM SNP 0008.scaffold00029 1215393 1 G T - ReadM SNP 0008.scaffold00029 1215421 1 A G - ReadM SNP 0008.scaffold00029 1215507 1 T C - ReadM SNP 0008.scaffold00029 1215635 1 G A - ReadM SNP 0008.scaffold00029 1215906 1 G A - ReadM SNP 0008.scaffold00029 1215926 1 C T - ReadM SNP 0008.scaffold00029 1216107 1 G T - ReadM SNP 0008.scaffold00029 1216392 1 T C - ReadM SNP 0008.scaffold00029 1216504 1 T G - ReadM SNP 0008.scaffold00029 1216528 1 C T - ReadM SNP 0008.scaffold00029 1216699 1 G C - ReadM SNP 0008.scaffold00029 1216917 1 G A - ReadM SNP 0008.scaffold00029 1216979 1 A C - ReadM SNP 0008.scaffold00029 1216988 1 T C - ReadM SNP 0008.scaffold00029 1217109 1 C T - ReadM SNP 0008.scaffold00029 1217159 1 A G - ReadM SNP 0008.scaffold00029 1217204 1 C G - ReadM SNP 0008.scaffold00029 1217267 1 C T - ReadM SNP 0008.scaffold00029 1217279 1 G C - ReadM SNP 0008.scaffold00029 1217312 1 G A - Both SNP 0008.scaffold00029 1217490 1 T A scaffold27371 Both INDEL 0008.scaffold00029 1217517 1 G . scaffold27371 Both SNP 0008.scaffold00029 1217523 1 C T scaffold27371 Both SNP 0008.scaffold00029 1217552 1 C T scaffold27371 Both SNP 0008.scaffold00029 1217598 1 G T scaffold27371 Both INDEL 0008.scaffold00029 1217622 1 A . scaffold27371 ScafM INDEL 0008.scaffold00029 1217638 1 . A scaffold27371 Both SNP 0008.scaffold00029 1217738 1 C A scaffold27371 Both SNP 0008.scaffold00029 1217750 1 A G scaffold27371 Both SNP 0008.scaffold00029 1217803 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1217841 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1217853 2 AA TT scaffold27371 Both SNP 0008.scaffold00029 1217874 1 T G scaffold27371 Both SNP 0008.scaffold00029 1218077 1 T C scaffold27371 Both SNP 0008.scaffold00029 1218112 1 G A scaffold27371 Both SNP 0008.scaffold00029 1218231 1 C A scaffold27371 Both SNP 0008.scaffold00029 1218235 1 A G scaffold27371 Both SNP 0008.scaffold00029 1218248 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1218299 1 C T scaffold27371 Both SNP 0008.scaffold00029 1218365 1 C A scaffold27371 Both SNP 0008.scaffold00029 1218486 1 G T scaffold27371 Both SNP 0008.scaffold00029 1218495 1 A T scaffold27371 Both SNP 0008.scaffold00029 1218497 1 G C scaffold27371 Both SNP 0008.scaffold00029 1218539 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1218868 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1218919 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1218921 1 C G scaffold27371 ScafM SNP 0008.scaffold00029 1218923 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1219000 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1219017 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1219235 1 T C scaffold27371 ScafM INDEL 0008.scaffold00029 1219237 3 ... TTA scaffold27371 ScafM SNP 0008.scaffold00029 1219249 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1219260 1 T C scaffold27371 ScafM INDEL 0008.scaffold00029 1219327 4 .... TCTT scaffold27371 ScafM SNP 0008.scaffold00029 1219340 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1219344 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1219386 1 A T scaffold27371 ReadM SNP 0008.scaffold00029 1219659 1 C T - ReadM SNP 0008.scaffold00029 1223317 1 G C - ReadM SNP 0008.scaffold00029 1223364 1 C T - ScafM SNP 0008.scaffold00029 1225264 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1225292 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1225317 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1225328 2 GT AC scaffold27371 ScafM SNP 0008.scaffold00029 1225337 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1225411 1 C T scaffold27371 ScafM INDEL 0008.scaffold00029 1225438 1 G . scaffold27371 ScafM SNP 0008.scaffold00029 1225548 2 CC TA scaffold27371 ScafM SNP 0008.scaffold00029 1225553 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1225595 1 T C scaffold27371 ScafM INDEL 0008.scaffold00029 1225649 3 TAC ... scaffold27371 ScafM SNP 0008.scaffold00029 1225654 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1225701 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1225780 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1225794 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1225867 1 . G scaffold27371 ScafM SNP 0008.scaffold00029 1225869 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1225872 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1225887 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1225899 1 . G scaffold27371 ScafM SNP 0008.scaffold00029 1225921 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1225947 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1225980 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1225988 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1225991 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1226005 1 A C scaffold27371 ScafM SNP 0008.scaffold00029 1226017 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1226183 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1226208 6 ACATAT ...... scaffold27371 ScafM SNP 0008.scaffold00029 1226255 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1226297 1 G C scaffold27371 ScafM INDEL 0008.scaffold00029 1226324 1 . A scaffold27371 ScafM SNP 0008.scaffold00029 1226331 1 C A scaffold27371 ScafM INDEL 0008.scaffold00029 1226367 1 . G scaffold27371 ScafM SNP 0008.scaffold00029 1226371 1 T C scaffold27371 ScafM INDEL 0008.scaffold00029 1226394 5 TGTGT ..... scaffold27371 ScafM SNP 0008.scaffold00029 1226419 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1226421 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1226714 1 T A scaffold27371 ScafM SNP 0008.scaffold00029 1226781 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1226813 1 G T scaffold27371 ScafM SNP 0008.scaffold00029 1227095 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1227127 1 A C scaffold27371 ScafM INDEL 0008.scaffold00029 1227129 1 A . scaffold27371 ScafM SNP 0008.scaffold00029 1227135 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1227177 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1227203 1 A G scaffold27371 ScafM INDEL 0008.scaffold00029 1227862 2 CC .T scaffold27371 ScafM SNP 0008.scaffold00029 1227871 1 A C scaffold27371 ScafM SNP 0008.scaffold00029 1227883 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1227937 2 TT CC scaffold27371 ScafM SNP 0008.scaffold00029 1227951 1 A T scaffold27371 Both SNP 0008.scaffold00029 1228042 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1228204 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1228234 1 C T scaffold27371 Both SNP 0008.scaffold00029 1228389 1 G A scaffold27371 Both SNP 0008.scaffold00029 1228437 1 A G scaffold27371 Both SNP 0008.scaffold00029 1228644 1 C G scaffold27371 Both SNP 0008.scaffold00029 1228716 1 T A scaffold27371 Both SNP 0008.scaffold00029 1228736 1 A G scaffold27371 Both INDEL 0008.scaffold00029 1229063 1 A . scaffold27371 ScafM SNP 0008.scaffold00029 1229079 1 A G scaffold27371 ScafM INDEL 0008.scaffold00029 1229085 4 AAGT .... scaffold27371 ScafM INDEL 0008.scaffold00029 1229140 6 ...... AGTTCA scaffold27371 Both SNP 0008.scaffold00029 1229182 1 C G scaffold27371 Both SNP 0008.scaffold00029 1229195 1 A G scaffold27371 Both SNP 0008.scaffold00029 1229248 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1229286 5 TCTTG ..... scaffold27371 ScafM INDEL 0008.scaffold00029 1229293 2 AG .. scaffold27371 ScafM SNP 0008.scaffold00029 1229302 1 C G scaffold27371 ScafM SNP 0008.scaffold00029 1229343 3 CTC TGA scaffold27371 ScafM SNP 0008.scaffold00029 1229347 1 C T scaffold27371 ScafM INDEL 0008.scaffold00029 1229348 2 .A GT scaffold27371 ScafM SNP 0008.scaffold00029 1229386 1 C A scaffold27371 ScafM SNP 0008.scaffold00029 1229442 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1229444 1 T C scaffold27371 ScafM SNP 0008.scaffold00029 1229449 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1229462 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1229614 1 T C scaffold27371 Both SNP 0008.scaffold00029 1229654 1 G T scaffold27371 Both SNP 0008.scaffold00029 1229711 1 G A scaffold27371 Both SNP 0008.scaffold00029 1229913 1 A G scaffold27371 Both SNP 0008.scaffold00029 1229925 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1229959 4 CGTA .... scaffold27371 ScafM SNP 0008.scaffold00029 1229971 1 A G scaffold27371 Both SNP 0008.scaffold00029 1230041 1 T A scaffold27371 ScafM INDEL 0008.scaffold00029 1230097 17 AGGGCCATAAGAATCTA ................. scaffold27371 ScafM SNP 0008.scaffold00029 1230129 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1230133 4 ATCG .... scaffold27371 ScafM SNP 0008.scaffold00029 1230172 1 G A scaffold27371 ScafM SNP 0008.scaffold00029 1230215 1 T G scaffold27371 Both SNP 0008.scaffold00029 1230231 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1230248 2 TT CC scaffold27371 Both SNP 0008.scaffold00029 1230480 1 A G scaffold27371 ScafM INDEL 0008.scaffold00029 1230530 2 .. TC scaffold27371 ScafM SNP 0008.scaffold00029 1230565 1 A G scaffold27371 ScafM SNP 0008.scaffold00029 1230567 1 C T scaffold27371 ScafM SNP 0008.scaffold00029 1230574 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1230639 2 TC .. scaffold27371 ScafM SNP 0008.scaffold00029 1230645 1 T G scaffold27371 ScafM SNP 0008.scaffold00029 1230681 1 G A scaffold27371 ScafM INDEL 0008.scaffold00029 1230729 5 ATACG ..... scaffold27371 Both SNP 0008.scaffold00029 1230869 1 T A scaffold27371 ScafM INDEL 0008.scaffold00029 1230950 3 ... ATA scaffold27371 ScafM SNP 0008.scaffold00029 1230963 1 A C scaffold27371 ScafM INDEL 0008.scaffold00029 1230971 4 ACCG .... scaffold27371 ScafM SNP 0008.scaffold00029 1230984 1 A T scaffold27371 ScafM SNP 0008.scaffold00029 1231024 1 C T scaffold27371 ScafM INDEL 0008.scaffold00029 1231080 1 G . scaffold27371 ScafM SNP 0008.scaffold00029 1232090 1 G A scaffold9776 ScafM INDEL 0008.scaffold00029 1232136 2 .. TA scaffold9776 ScafM SNP 0008.scaffold00029 1232383 1 G A scaffold9776 ScafM SNP 0008.scaffold00029 1232453 1 T G scaffold9776 Both SNP 0008.scaffold00029 1232486 1 C T scaffold9776 Both SNP 0008.scaffold00029 1232560 1 C T scaffold9776 Both SNP 0008.scaffold00029 1232580 1 G C scaffold9776 ScafM INDEL 0008.scaffold00029 1232623 4 .... ATAT scaffold9776 ScafM SNP 0008.scaffold00029 1232626 1 C T scaffold9776 ScafM SNP 0008.scaffold00029 1232658 1 T C scaffold9776 ReadM SNP 0008.scaffold00029 1232743 1 A T - ReadM SNP 0008.scaffold00029 1232775 1 G A - ReadM SNP 0008.scaffold00029 1232862 1 G T - ReadM SNP 0008.scaffold00029 1232884 1 T C - ReadM INDEL 0008.scaffold00029 1232934 1 T . - ReadM SNP 0008.scaffold00029 1232977 1 G A - ReadM SNP 0008.scaffold00029 1233021 1 C T - Both INDEL 0008.scaffold00029 1233087 1 G . scaffold9776 ScafM SNP 0008.scaffold00029 1233110 1 A C scaffold9776 ScafM SNP 0008.scaffold00029 1233140 1 G C scaffold9776 ReadM SNP 0008.scaffold00029 1233335 1 G T - ScafM INDEL 0008.scaffold00029 1233627 2 .. AT scaffold9776 ScafM INDEL 0008.scaffold00029 1233628 5 ..... CCCCC scaffold9776 ScafM SNP 0008.scaffold00029 1233646 2 AT GG scaffold9776 ScafM SNP 0008.scaffold00029 1233650 1 A G scaffold9776 Both SNP 0008.scaffold00029 1233677 1 C T scaffold9776 Both SNP 0008.scaffold00029 1233695 1 G A scaffold9776 Both SNP 0008.scaffold00029 1233786 1 T A scaffold9776 Both SNP 0008.scaffold00029 1233797 1 G C scaffold9776 Both INDEL 0008.scaffold00029 1233878 1 G . scaffold9776 Both SNP 0008.scaffold00029 1233898 1 G T scaffold9776 ScafM SNP 0008.scaffold00029 1233940 1 T C scaffold9776 ScafM SNP 0008.scaffold00029 1233944 1 A G scaffold9776 ScafM SNP 0008.scaffold00029 1233947 1 C G scaffold9776 ScafM SNP 0008.scaffold00029 1233957 1 G A scaffold9776 Both SNP 0008.scaffold00029 1234029 1 C T scaffold9776 Both SNP 0008.scaffold00029 1234069 1 T C scaffold9776 Both SNP 0008.scaffold00029 1234101 1 G A scaffold9776 ScafM SNP 0008.scaffold00029 1234159 1 A C scaffold9776 ScafM SNP 0008.scaffold00029 1234161 1 T C scaffold9776 ScafM SNP 0008.scaffold00029 1234170 1 A C scaffold9776 ScafM SNP 0008.scaffold00029 1234180 1 G A scaffold9776 ScafM INDEL 0008.scaffold00029 1234208 4 GCGT .... scaffold9776 Both SNP 0008.scaffold00029 1234245 1 C T scaffold9776 Both SNP 0008.scaffold00029 1234388 1 C T scaffold9776 Both SNP 0008.scaffold00029 1234474 1 C A scaffold9776 ScafM SNP 0008.scaffold00029 1234503 1 G A scaffold9776 Both SNP 0008.scaffold00029 1234575 1 A G scaffold9776 Both SNP 0008.scaffold00029 1234589 1 T C scaffold9776 Both INDEL 0008.scaffold00029 1234681 2 GT .. scaffold9776 ReadM SNP 0008.scaffold00029 1234701 1 A G - ReadM SNP 0008.scaffold00029 1234760 1 G A - ReadM SNP 0008.scaffold00029 1234800 1 A G - ReadM SNP 0008.scaffold00029 1234810 1 G C - ReadM SNP 0008.scaffold00029 1234865 1 T A - ReadM SNP 0008.scaffold00029 1234889 1 A G - ReadM SNP 0008.scaffold00029 1235093 1 T C - ReadM SNP 0008.scaffold00029 1235097 1 C G - ReadM SNP 0008.scaffold00029 1235264 1 C A - ReadM SNP 0008.scaffold00029 1235288 1 G A - ReadM SNP 0008.scaffold00029 1235328 1 G A - ReadM SNP 0008.scaffold00029 1235368 1 G A - ReadM SNP 0008.scaffold00029 1235421 1 A G - ReadM SNP 0008.scaffold00029 1235435 1 G A - ReadM INDEL 0008.scaffold00029 1235450 2 .. TG - ReadM SNP 0008.scaffold00029 1235483 1 G A - ReadM SNP 0008.scaffold00029 1235573 1 T C - ReadM SNP 0008.scaffold00029 1235577 1 G A - ReadM SNP 0008.scaffold00029 1235602 1 T G - ReadM SNP 0008.scaffold00029 1235828 1 T G - ReadM SNP 0008.scaffold00029 1235832 1 C T - ReadM SNP 0008.scaffold00029 1235865 1 G A - ReadM SNP 0008.scaffold00029 1235906 1 G A - ReadM SNP 0008.scaffold00029 1235928 1 T C - ReadM INDEL 0008.scaffold00029 1236079 1 . G - ReadM SNP 0008.scaffold00029 1236102 1 T G - ReadM SNP 0008.scaffold00029 1236243 1 C T - ReadM SNP 0008.scaffold00029 1236283 1 T G - ReadM SNP 0008.scaffold00029 1238655 1 T C - ReadM SNP 0008.scaffold00029 1238709 1 C A - ReadM SNP 0008.scaffold00029 1238716 1 C T - ReadM SNP 0008.scaffold00029 1238732 1 T G - ReadM SNP 0008.scaffold00029 1238823 1 G A - ReadM SNP 0008.scaffold00029 1238831 1 C T - ReadM SNP 0008.scaffold00029 1238886 1 T C - ReadM SNP 0008.scaffold00029 1239002 1 G C - ReadM SNP 0008.scaffold00029 1239039 1 C T - ReadM SNP 0008.scaffold00029 1239069 1 G T - ReadM SNP 0008.scaffold00029 1239127 1 A G - ReadM SNP 0008.scaffold00029 1239196 1 T A - Both SNP 0008.scaffold00029 1239459 1 A C scaffold9776 Both SNP 0008.scaffold00029 1239591 1 A G scaffold9776 Both SNP 0008.scaffold00029 1239730 1 G C scaffold9776 ReadM SNP 0008.scaffold00029 1239921 1 G C - ReadM INDEL 0008.scaffold00029 1239959 1 A . - Both SNP 0008.scaffold00029 1240122 1 A G scaffold9776 Both SNP 0008.scaffold00029 1240298 1 G C scaffold9776 Both SNP 0008.scaffold00029 1240301 1 G A scaffold9776 Both SNP 0008.scaffold00029 1240359 1 C T scaffold9776 Both SNP 0008.scaffold00029 1240461 1 A G scaffold9776 ScafM INDEL 0008.scaffold00029 1240581 4 AGTC .... scaffold9776 ScafM INDEL 0008.scaffold00029 1240587 1 C . scaffold9776 ScafM INDEL 0008.scaffold00029 1240590 3 TAG ... scaffold9776 ScafM INDEL 0008.scaffold00029 1240594 3 TTA ..C scaffold9776 ScafM SNP 0008.scaffold00029 1240606 1 C G scaffold9776 Both SNP 0008.scaffold00029 1240620 1 A C scaffold9776 Both SNP 0008.scaffold00029 1240825 1 T C scaffold9776 Both SNP 0008.scaffold00029 1240848 1 C T scaffold9776 ScafM SNP 0008.scaffold00029 1240954 1 A G scaffold9776 Both SNP 0008.scaffold00029 1241087 1 T C scaffold9776 Both SNP 0008.scaffold00029 1241112 1 G A scaffold9776 Both SNP 0008.scaffold00029 1241142 1 A G scaffold9776 ScafM SNP 0008.scaffold00029 1241363 1 T C scaffold9776 ScafM SNP 0008.scaffold00029 1241365 1 C G scaffold9776 Both SNP 0008.scaffold00029 1241508 1 T G scaffold9776 Both SNP 0008.scaffold00029 1241561 1 A G scaffold9776 ScafM SNP 0008.scaffold00029 1241580 1 C G scaffold9776 ScafM SNP 0008.scaffold00029 1241582 1 T C scaffold9776 ScafM SNP 0008.scaffold00029 1241584 1 A T scaffold9776 ScafM SNP 0008.scaffold00029 1241600 1 T A scaffold9776 Both SNP 0008.scaffold00029 1241611 1 A T scaffold9776 Both SNP 0008.scaffold00029 1241619 1 A C scaffold9776 ReadM SNP 0008.scaffold00029 1241813 1 G A - ReadM SNP 0008.scaffold00029 1241879 1 G A - ReadM SNP 0008.scaffold00029 1242006 1 T C - ReadM SNP 0008.scaffold00029 1242025 1 A G - ReadM SNP 0008.scaffold00029 1242097 1 C T - ReadM SNP 0008.scaffold00029 1242143 1 A G - ReadM SNP 0008.scaffold00029 1242172 1 C T - ReadM SNP 0008.scaffold00029 1242188 1 G A - ReadM SNP 0008.scaffold00029 1242260 1 T A - ReadM SNP 0008.scaffold00029 1242276 1 T C - ReadM SNP 0008.scaffold00029 1242320 1 A G - ScafM SNP 0008.scaffold00029 1242919 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1242927 1 G A scaffold8150 ReadM SNP 0008.scaffold00029 1247157 1 C T - ReadM SNP 0008.scaffold00029 1247161 1 G A - ReadM SNP 0008.scaffold00029 1247271 1 T C - ReadM SNP 0008.scaffold00029 1247348 1 A G - Both SNP 0008.scaffold00029 1247482 1 G A scaffold8150 Both SNP 0008.scaffold00029 1247605 1 G T scaffold8150 ScafM SNP 0008.scaffold00029 1247610 1 G A scaffold8150 Both SNP 0008.scaffold00029 1247634 1 A C scaffold8150 Both SNP 0008.scaffold00029 1247659 1 G A scaffold8150 Both SNP 0008.scaffold00029 1247728 1 A C scaffold8150 Both SNP 0008.scaffold00029 1247795 1 G A scaffold8150 Both SNP 0008.scaffold00029 1247860 1 G T scaffold8150 Both SNP 0008.scaffold00029 1247946 1 T G scaffold8150 Both SNP 0008.scaffold00029 1247963 1 A C scaffold8150 ScafM INDEL 0008.scaffold00029 1247992 1 T . scaffold8150 Both SNP 0008.scaffold00029 1248047 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1248214 2 .. TC scaffold8150 ScafM SNP 0008.scaffold00029 1248216 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1248227 1 C T scaffold8150 Both SNP 0008.scaffold00029 1248270 1 T A scaffold8150 Both SNP 0008.scaffold00029 1248288 1 A T scaffold8150 Both SNP 0008.scaffold00029 1248298 1 T C scaffold8150 Both SNP 0008.scaffold00029 1248428 1 T G scaffold8150 Both SNP 0008.scaffold00029 1248492 1 C T scaffold8150 Both SNP 0008.scaffold00029 1248499 1 C T scaffold8150 Both SNP 0008.scaffold00029 1248523 1 C T scaffold8150 Both SNP 0008.scaffold00029 1248544 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1248648 1 A C scaffold8150 Both SNP 0008.scaffold00029 1248660 1 T A scaffold8150 Both SNP 0008.scaffold00029 1248734 1 A T scaffold8150 Both SNP 0008.scaffold00029 1248769 1 T C scaffold8150 Both SNP 0008.scaffold00029 1248774 1 T G scaffold8150 Both SNP 0008.scaffold00029 1248935 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1248973 2 CC TA scaffold8150 ReadM INDEL 0008.scaffold00029 1249427 1 . T - ReadM SNP 0008.scaffold00029 1249445 1 T C - ScafM SNP 0008.scaffold00029 1249701 1 A T scaffold8150 ReadM SNP 0008.scaffold00029 1250098 1 C T - ReadM SNP 0008.scaffold00029 1250174 1 C T - ReadM SNP 0008.scaffold00029 1250250 1 C T - ReadM SNP 0008.scaffold00029 1250298 1 C T - ReadM SNP 0008.scaffold00029 1250343 1 T C - ReadM SNP 0008.scaffold00029 1250366 1 G T - ReadM SNP 0008.scaffold00029 1250642 1 C T - ReadM SNP 0008.scaffold00029 1250671 1 C G - ReadM SNP 0008.scaffold00029 1250677 1 C T - ReadM SNP 0008.scaffold00029 1250852 1 T G - ReadM INDEL 0008.scaffold00029 1250855 1 . A - ReadM SNP 0008.scaffold00029 1250947 1 T C - ReadM SNP 0008.scaffold00029 1251111 1 T A - ReadM INDEL 0008.scaffold00029 1251233 1 G . - ReadM SNP 0008.scaffold00029 1251246 1 A G - ScafM INDEL 0008.scaffold00029 1251726 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1251733 2 TA AT scaffold8150 ScafM INDEL 0008.scaffold00029 1251739 1 . T scaffold8150 ScafM INDEL 0008.scaffold00029 1251799 1 A . scaffold8150 ReadM SNP 0008.scaffold00029 1251933 1 G A - ReadM INDEL 0008.scaffold00029 1252761 3 ... TAA - ReadM SNP 0008.scaffold00029 1252863 1 C T - ReadM SNP 0008.scaffold00029 1252920 1 C T - ReadM SNP 0008.scaffold00029 1253033 1 G T - ReadM SNP 0008.scaffold00029 1253093 1 G A - ReadM SNP 0008.scaffold00029 1253125 1 T C - ReadM SNP 0008.scaffold00029 1253200 1 G C - ReadM SNP 0008.scaffold00029 1253236 1 T C - ReadM SNP 0008.scaffold00029 1253297 1 C T - ReadM SNP 0008.scaffold00029 1253386 1 C T - ReadM SNP 0008.scaffold00029 1253467 1 T C - ReadM INDEL 0008.scaffold00029 1253530 1 . T - ReadM SNP 0008.scaffold00029 1253639 1 A G - ReadM SNP 0008.scaffold00029 1253693 1 C T - ReadM SNP 0008.scaffold00029 1253751 1 A G - ReadM SNP 0008.scaffold00029 1253838 1 T C - ReadM SNP 0008.scaffold00029 1253925 1 T C - ReadM SNP 0008.scaffold00029 1254009 1 T A - ReadM INDEL 0008.scaffold00029 1254025 1 . C - ReadM SNP 0008.scaffold00029 1254065 1 A C - ReadM SNP 0008.scaffold00029 1254182 1 A G - ReadM SNP 0008.scaffold00029 1254214 1 T C - ReadM SNP 0008.scaffold00029 1254308 1 A G - ReadM SNP 0008.scaffold00029 1254424 1 A C - ReadM SNP 0008.scaffold00029 1254528 1 C T - ReadM SNP 0008.scaffold00029 1254652 1 T C - ReadM SNP 0008.scaffold00029 1254675 1 A G - ReadM SNP 0008.scaffold00029 1254684 1 T C - ReadM INDEL 0008.scaffold00029 1254759 1 A . - ReadM SNP 0008.scaffold00029 1254852 1 T G - ReadM SNP 0008.scaffold00029 1254859 1 G A - ReadM SNP 0008.scaffold00029 1254905 1 G T - ReadM SNP 0008.scaffold00029 1254946 1 G A - ReadM SNP 0008.scaffold00029 1254978 1 T C - ReadM SNP 0008.scaffold00029 1255088 1 G A - ReadM SNP 0008.scaffold00029 1255145 1 C T - ReadM SNP 0008.scaffold00029 1255159 1 A G - ReadM SNP 0008.scaffold00029 1255363 1 G T - ReadM SNP 0008.scaffold00029 1255476 1 A G - ReadM SNP 0008.scaffold00029 1255482 1 T C - ReadM SNP 0008.scaffold00029 1255514 1 G A - ReadM SNP 0008.scaffold00029 1255532 1 T C - ReadM SNP 0008.scaffold00029 1255548 1 C T - ReadM SNP 0008.scaffold00029 1255587 1 C T - ReadM INDEL 0008.scaffold00029 1255669 1 T . - ReadM SNP 0008.scaffold00029 1255690 1 T A - ReadM SNP 0008.scaffold00029 1255736 1 A T - ReadM INDEL 0008.scaffold00029 1255787 1 . C - ReadM SNP 0008.scaffold00029 1255814 1 T C - ReadM SNP 0008.scaffold00029 1255938 1 T G - ReadM SNP 0008.scaffold00029 1256027 1 G A - ReadM SNP 0008.scaffold00029 1256138 1 A C - ReadM INDEL 0008.scaffold00029 1256157 1 T . - ReadM SNP 0008.scaffold00029 1256191 1 C T - ReadM SNP 0008.scaffold00029 1256204 1 A T - ReadM SNP 0008.scaffold00029 1256245 1 C T - ReadM SNP 0008.scaffold00029 1256290 1 A G - ReadM SNP 0008.scaffold00029 1256417 1 C T - ReadM SNP 0008.scaffold00029 1256437 1 T C - ReadM SNP 0008.scaffold00029 1256463 1 C T - ReadM SNP 0008.scaffold00029 1256476 1 T A - ReadM SNP 0008.scaffold00029 1256557 1 T C - ReadM SNP 0008.scaffold00029 1256592 1 T C - ReadM SNP 0008.scaffold00029 1256671 1 C T - ReadM SNP 0008.scaffold00029 1256742 1 A T - ReadM SNP 0008.scaffold00029 1256828 1 T C - ReadM SNP 0008.scaffold00029 1256845 1 T C - ScafM SNP 0008.scaffold00029 1258515 1 G A scaffold8150 ScafM INDEL 0008.scaffold00029 1258654 7 AAAGAAA ....... scaffold8150 ScafM SNP 0008.scaffold00029 1258688 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1258696 1 G A scaffold8150 ScafM INDEL 0008.scaffold00029 1258725 3 TCG ... scaffold8150 ScafM INDEL 0008.scaffold00029 1258771 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1258776 1 C A scaffold8150 ScafM INDEL 0008.scaffold00029 1258888 1 . T scaffold8150 ReadM SNP 0008.scaffold00029 1261116 1 G A - ReadM SNP 0008.scaffold00029 1261127 1 G A - ReadM SNP 0008.scaffold00029 1261165 1 A G - ReadM SNP 0008.scaffold00029 1261285 1 C T - ReadM SNP 0008.scaffold00029 1261326 1 G A - ReadM SNP 0008.scaffold00029 1261365 1 T G - ReadM SNP 0008.scaffold00029 1261421 1 A G - ReadM SNP 0008.scaffold00029 1261866 1 C T - ReadM SNP 0008.scaffold00029 1261909 1 A G - ReadM SNP 0008.scaffold00029 1261987 1 T C - ReadM SNP 0008.scaffold00029 1262167 1 C T - ReadM SNP 0008.scaffold00029 1262316 1 T G - ReadM SNP 0008.scaffold00029 1262429 1 G C - ReadM SNP 0008.scaffold00029 1262529 1 C G - ReadM SNP 0008.scaffold00029 1262626 1 A T - ReadM SNP 0008.scaffold00029 1262826 1 T C - ReadM SNP 0008.scaffold00029 1262951 1 A C - ReadM SNP 0008.scaffold00029 1262978 1 G A - ReadM SNP 0008.scaffold00029 1263000 1 G C - ReadM SNP 0008.scaffold00029 1263141 1 G A - ReadM SNP 0008.scaffold00029 1263196 1 G T - ReadM SNP 0008.scaffold00029 1263280 1 C A - ReadM SNP 0008.scaffold00029 1263477 1 A G - ReadM SNP 0008.scaffold00029 1263541 1 C G - ReadM SNP 0008.scaffold00029 1263584 1 C T - ReadM SNP 0008.scaffold00029 1263614 1 T C - ReadM SNP 0008.scaffold00029 1263689 1 A G - ReadM SNP 0008.scaffold00029 1263737 1 A G - ReadM SNP 0008.scaffold00029 1263770 1 A T - ReadM SNP 0008.scaffold00029 1263849 1 G T - ReadM SNP 0008.scaffold00029 1263871 1 A G - ReadM SNP 0008.scaffold00029 1263933 1 G A - ReadM SNP 0008.scaffold00029 1263951 1 A T - ReadM SNP 0008.scaffold00029 1264107 1 G A - ReadM SNP 0008.scaffold00029 1264162 1 A G - ReadM SNP 0008.scaffold00029 1264283 1 C G - ReadM SNP 0008.scaffold00029 1264304 1 G C - ScafM SNP 0008.scaffold00029 1265153 2 AA TG scaffold8150 ScafM SNP 0008.scaffold00029 1265225 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1265305 2 .. AT scaffold8150 ScafM SNP 0008.scaffold00029 1265311 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1265426 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1265461 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1265486 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1265513 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1265532 1 G C scaffold8150 ScafM INDEL 0008.scaffold00029 1265550 26 .......................... ATAACATCAAATTCCACGAGTATGCA scaffold8150 ScafM SNP 0008.scaffold00029 1265597 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1265611 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1265684 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1265727 24 GCCCTCAAATCAAGCAACACTCAC ........................ scaffold8150 ScafM SNP 0008.scaffold00029 1265761 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1265787 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1265817 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1265825 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1265839 2 GC AA scaffold8150 ScafM SNP 0008.scaffold00029 1265856 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1265858 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1265875 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1265878 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1265883 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1266197 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1266206 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1266208 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1266211 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1266241 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1266243 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1266246 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1266258 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1266267 1 G C scaffold8150 ScafM INDEL 0008.scaffold00029 1266279 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1266330 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1266384 3 TAA ... scaffold8150 ScafM SNP 0008.scaffold00029 1266452 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1266459 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1266525 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1266537 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1266606 1 A C scaffold8150 Both SNP 0008.scaffold00029 1266762 1 G A scaffold8150 Both SNP 0008.scaffold00029 1266789 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1266906 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1267062 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1267235 2 .. TG scaffold8150 ScafM INDEL 0008.scaffold00029 1267245 7 TCACAAC ....... scaffold8150 ScafM SNP 0008.scaffold00029 1267282 1 A C scaffold8150 ReadM SNP 0008.scaffold00029 1267861 1 G A - ScafM INDEL 0008.scaffold00029 1281035 1 . C scaffold8150 ScafM INDEL 0008.scaffold00029 1281090 3 GCC ... scaffold8150 ScafM INDEL 0008.scaffold00029 1281104 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1281136 1 C T scaffold8150 Both SNP 0008.scaffold00029 1281444 1 G A scaffold8150 Both SNP 0008.scaffold00029 1281507 1 T A scaffold8150 Both SNP 0008.scaffold00029 1281590 1 T C scaffold8150 ReadM SNP 0008.scaffold00029 1281661 1 C A - ReadM SNP 0008.scaffold00029 1281717 1 T C - ReadM SNP 0008.scaffold00029 1281769 1 G T - ReadM INDEL 0008.scaffold00029 1282075 1 G . - ReadM SNP 0008.scaffold00029 1282159 1 T G - ReadM SNP 0008.scaffold00029 1282170 1 A T - ReadM SNP 0008.scaffold00029 1282185 1 T C - ScafM SNP 0008.scaffold00029 1282296 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1282320 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1282400 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1282437 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1283542 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1283604 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1283618 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1284285 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1284970 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1284997 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1285223 1 G A scaffold8150 Both SNP 0008.scaffold00029 1285285 1 A T scaffold8150 Both SNP 0008.scaffold00029 1285437 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1285509 1 C T - ReadM SNP 0008.scaffold00029 1285600 1 T C - ReadM SNP 0008.scaffold00029 1285660 1 G A - ReadM SNP 0008.scaffold00029 1285702 1 T G - ReadM SNP 0008.scaffold00029 1285733 1 G A - ScafM SNP 0008.scaffold00029 1285872 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1285945 1 C T scaffold8150 Both SNP 0008.scaffold00029 1285988 1 T C scaffold8150 Both SNP 0008.scaffold00029 1286061 1 T C scaffold8150 Both SNP 0008.scaffold00029 1286072 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1286122 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1286174 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1286216 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1286250 1 T G scaffold8150 ScafM INDEL 0008.scaffold00029 1286261 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1286292 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1286781 28 ATATATGATATATGATATATGATATATG ............................ scaffold8150 ScafM SNP 0008.scaffold00029 1286944 1 T G scaffold8150 ScafM INDEL 0008.scaffold00029 1286985 1 A . scaffold8150 ScafM SNP 0008.scaffold00029 1287034 1 A T scaffold8150 ReadM SNP 0008.scaffold00029 1288123 1 T C - Both SNP 0008.scaffold00029 1288314 1 A G scaffold8150 Both INDEL 0008.scaffold00029 1288371 3 ... ACT scaffold8150 Both SNP 0008.scaffold00029 1288445 1 C T scaffold8150 Both INDEL 0008.scaffold00029 1288524 1 . T scaffold8150 ScafM INDEL 0008.scaffold00029 1288559 3 AAA ... scaffold8150 ScafM SNP 0008.scaffold00029 1288619 1 A G scaffold8150 Both SNP 0008.scaffold00029 1288650 1 T C scaffold8150 Both SNP 0008.scaffold00029 1288773 1 C T scaffold8150 Both SNP 0008.scaffold00029 1288775 1 A G scaffold8150 Both SNP 0008.scaffold00029 1288793 1 C T scaffold8150 Both SNP 0008.scaffold00029 1289029 1 G A scaffold8150 Both SNP 0008.scaffold00029 1289077 1 C A scaffold8150 ReadM SNP 0008.scaffold00029 1289121 1 G A - Both SNP 0008.scaffold00029 1289231 1 T C scaffold8150 Both SNP 0008.scaffold00029 1289331 1 C T scaffold8150 Both SNP 0008.scaffold00029 1289352 1 T A scaffold8150 Both SNP 0008.scaffold00029 1289386 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1289606 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1289623 3 ... TAT scaffold8150 ScafM SNP 0008.scaffold00029 1289635 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1289641 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1289652 2 CC GA scaffold8150 ScafM SNP 0008.scaffold00029 1289800 2 AT CC scaffold8150 Both INDEL 0008.scaffold00029 1289819 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1289852 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1289860 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1289867 2 TT .. scaffold8150 ScafM INDEL 0008.scaffold00029 1289873 4 TCTC .... scaffold8150 Both SNP 0008.scaffold00029 1289994 1 T C scaffold8150 Both INDEL 0008.scaffold00029 1290084 1 . T scaffold8150 Both INDEL 0008.scaffold00029 1290125 1 T . scaffold8150 Both INDEL 0008.scaffold00029 1290218 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1290227 1 A T scaffold8150 Both SNP 0008.scaffold00029 1290330 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1290721 1 G A - ReadM SNP 0008.scaffold00029 1290808 1 G A - ReadM SNP 0008.scaffold00029 1290955 1 G A - ReadM SNP 0008.scaffold00029 1291057 1 C T - ReadM SNP 0008.scaffold00029 1291091 2 AC TG - Both SNP 0008.scaffold00029 1291114 1 T G scaffold8150 Both SNP 0008.scaffold00029 1291260 1 C T scaffold8150 Both SNP 0008.scaffold00029 1291347 1 C A scaffold8150 Both SNP 0008.scaffold00029 1291887 1 T C scaffold8150 Both SNP 0008.scaffold00029 1293020 1 G A scaffold8150 Both INDEL 0008.scaffold00029 1293101 2 .. TC scaffold8150 Both SNP 0008.scaffold00029 1293277 1 A T scaffold8150 Both SNP 0008.scaffold00029 1293296 1 A C scaffold8150 Both SNP 0008.scaffold00029 1293483 1 G A scaffold8150 Both INDEL 0008.scaffold00029 1293526 1 . A scaffold8150 Both SNP 0008.scaffold00029 1293803 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1294126 6 GGGGGG ...... scaffold8150 Both SNP 0008.scaffold00029 1294618 1 G C scaffold8150 Both SNP 0008.scaffold00029 1295121 1 T C scaffold8150 Both SNP 0008.scaffold00029 1295228 1 G A scaffold8150 Both SNP 0008.scaffold00029 1295357 1 A G scaffold8150 Both SNP 0008.scaffold00029 1295555 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1295611 6 TACATA ...... scaffold8150 Both SNP 0008.scaffold00029 1295909 1 C T scaffold8150 Both SNP 0008.scaffold00029 1295933 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1295993 72 AGCGTTCCATACTGCTTACATACACAAGCTAGGAGGAAGGATAGCATTGTAAATAGGCCAAGAAGTAATTTA ........................................................................ scaffold8150 Both SNP 0008.scaffold00029 1296327 1 A T scaffold8150 Both SNP 0008.scaffold00029 1296619 1 G T scaffold8150 Both INDEL 0008.scaffold00029 1296812 2 AC .. scaffold8150 Both SNP 0008.scaffold00029 1296920 1 T G scaffold8150 Both SNP 0008.scaffold00029 1297334 1 G A scaffold8150 Both SNP 0008.scaffold00029 1297509 1 C T scaffold8150 Both SNP 0008.scaffold00029 1297626 1 T C scaffold8150 Both SNP 0008.scaffold00029 1297887 1 G A scaffold8150 Both SNP 0008.scaffold00029 1298298 1 T C scaffold8150 Both SNP 0008.scaffold00029 1298331 1 G A scaffold8150 ScafM INDEL 0008.scaffold00029 1298375 6 ...... TGGAGT scaffold8150 Both SNP 0008.scaffold00029 1298738 1 C T scaffold8150 Both SNP 0008.scaffold00029 1298985 1 T C scaffold8150 Both SNP 0008.scaffold00029 1299091 1 T C scaffold8150 Both SNP 0008.scaffold00029 1300020 1 A G scaffold8150 Both SNP 0008.scaffold00029 1300290 1 T A scaffold8150 Both SNP 0008.scaffold00029 1300314 1 A T scaffold8150 Both SNP 0008.scaffold00029 1300429 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1300492 18 .................. TTTTCTTCTTTTTTTTTT scaffold8150 Both SNP 0008.scaffold00029 1300640 1 C T scaffold8150 Both SNP 0008.scaffold00029 1300663 1 T A scaffold8150 Both SNP 0008.scaffold00029 1300684 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1300705 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1300747 1 A T scaffold8150 ScafM INDEL 0008.scaffold00029 1300760 7 TTACTAT ....... scaffold8150 ScafM SNP 0008.scaffold00029 1300810 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1300825 3 CTA ... scaffold8150 Both SNP 0008.scaffold00029 1300877 1 G A scaffold8150 Both SNP 0008.scaffold00029 1300925 1 A G scaffold8150 ReadM INDEL 0008.scaffold00029 1300961 1 T . - Both SNP 0008.scaffold00029 1300980 1 C T scaffold8150 Both SNP 0008.scaffold00029 1301067 1 A G scaffold8150 Both SNP 0008.scaffold00029 1301148 1 T A scaffold8150 Both SNP 0008.scaffold00029 1301168 1 G T scaffold8150 Both SNP 0008.scaffold00029 1301219 1 T G scaffold8150 Both SNP 0008.scaffold00029 1301245 1 A G scaffold8150 ReadM SNP 0008.scaffold00029 1301264 1 G C - ReadM INDEL 0008.scaffold00029 1301344 1 . T - ReadM SNP 0008.scaffold00029 1301382 1 G A - ReadM SNP 0008.scaffold00029 1301410 1 T C - ReadM INDEL 0008.scaffold00029 1301456 1 A . - ReadM SNP 0008.scaffold00029 1301716 1 T G - ReadM SNP 0008.scaffold00029 1301854 1 A G - ReadM SNP 0008.scaffold00029 1301861 1 T A - ReadM SNP 0008.scaffold00029 1302107 1 T C - ReadM SNP 0008.scaffold00029 1302161 1 G C - ReadM SNP 0008.scaffold00029 1302177 1 A T - ReadM SNP 0008.scaffold00029 1302187 1 T C - ReadM SNP 0008.scaffold00029 1302331 1 T C - ReadM SNP 0008.scaffold00029 1302360 1 G A - ReadM SNP 0008.scaffold00029 1302365 1 T C - ReadM SNP 0008.scaffold00029 1302399 1 A T - ReadM SNP 0008.scaffold00029 1302438 1 C A - ReadM SNP 0008.scaffold00029 1302447 1 G A - ReadM SNP 0008.scaffold00029 1302601 1 C A - ReadM SNP 0008.scaffold00029 1302615 1 G T - ReadM SNP 0008.scaffold00029 1302718 1 T G - ReadM SNP 0008.scaffold00029 1302738 1 G A - ReadM SNP 0008.scaffold00029 1302742 1 T C - ReadM SNP 0008.scaffold00029 1302762 1 T C - ReadM SNP 0008.scaffold00029 1302775 1 C T - ReadM SNP 0008.scaffold00029 1302800 1 A C - ReadM SNP 0008.scaffold00029 1302916 1 G A - ReadM SNP 0008.scaffold00029 1302918 1 C T - ReadM SNP 0008.scaffold00029 1303018 1 C T - ReadM SNP 0008.scaffold00029 1303061 1 C T - ReadM SNP 0008.scaffold00029 1303126 1 G A - ReadM SNP 0008.scaffold00029 1303129 1 C T - ReadM SNP 0008.scaffold00029 1303179 1 G T - ReadM SNP 0008.scaffold00029 1303190 1 C T - ReadM SNP 0008.scaffold00029 1303226 1 G C - ReadM SNP 0008.scaffold00029 1303250 1 T A - ReadM SNP 0008.scaffold00029 1303294 1 A G - ReadM SNP 0008.scaffold00029 1303320 1 C T - ReadM SNP 0008.scaffold00029 1303371 1 G C - ReadM SNP 0008.scaffold00029 1303457 1 C A - ReadM SNP 0008.scaffold00029 1303489 1 T C - ReadM SNP 0008.scaffold00029 1303525 1 G A - Both SNP 0008.scaffold00029 1303530 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1303574 2 CT TG scaffold8150 Both SNP 0008.scaffold00029 1303623 1 A G scaffold8150 Both SNP 0008.scaffold00029 1303649 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1303870 1 T C - ReadM SNP 0008.scaffold00029 1303958 1 A C - ReadM SNP 0008.scaffold00029 1303964 1 T A - ReadM SNP 0008.scaffold00029 1304081 1 T A - ReadM SNP 0008.scaffold00029 1304089 1 C T - ReadM SNP 0008.scaffold00029 1304113 1 T G - ReadM SNP 0008.scaffold00029 1304219 1 C A - ReadM SNP 0008.scaffold00029 1304236 1 G A - ReadM SNP 0008.scaffold00029 1304275 1 A G - ScafM SNP 0008.scaffold00029 1304625 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1305482 1 T C - ReadM SNP 0008.scaffold00029 1305550 1 A G - ReadM SNP 0008.scaffold00029 1305616 1 G A - ReadM INDEL 0008.scaffold00029 1305630 1 T . - Both SNP 0008.scaffold00029 1305697 1 G A scaffold8150 Both INDEL 0008.scaffold00029 1305701 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1305717 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1306023 1 G A - ReadM SNP 0008.scaffold00029 1306030 1 G C - ReadM SNP 0008.scaffold00029 1306525 1 A T - ReadM SNP 0008.scaffold00029 1306534 1 G A - ScafM SNP 0008.scaffold00029 1307388 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1307401 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1307403 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1307405 1 G T scaffold8150 ScafM SNP 0008.scaffold00029 1307412 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1307442 1 T C scaffold8150 ReadM SNP 0008.scaffold00029 1307803 1 T C - ReadM SNP 0008.scaffold00029 1307832 1 C A - ReadM SNP 0008.scaffold00029 1308040 1 G A - ReadM SNP 0008.scaffold00029 1308114 1 C T - ReadM SNP 0008.scaffold00029 1308258 1 T C - ReadM SNP 0008.scaffold00029 1308291 1 T C - ScafM INDEL 0008.scaffold00029 1308398 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1308403 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1308462 2 GC TA scaffold8150 ScafM SNP 0008.scaffold00029 1308481 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1308508 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308554 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1308609 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308638 2 AC CT scaffold8150 ScafM INDEL 0008.scaffold00029 1308669 2 .. TC scaffold8150 ScafM SNP 0008.scaffold00029 1308678 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308738 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308754 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308790 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1308829 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1308853 1 G C scaffold8150 ScafM SNP 0008.scaffold00029 1308866 1 C T scaffold8150 ReadM SNP 0008.scaffold00029 1309444 1 T G - ReadM SNP 0008.scaffold00029 1309552 1 T A - ReadM SNP 0008.scaffold00029 1309605 1 G A - ReadM SNP 0008.scaffold00029 1309749 1 A C - ReadM SNP 0008.scaffold00029 1309810 1 C A - ReadM SNP 0008.scaffold00029 1309864 1 G A - ReadM SNP 0008.scaffold00029 1309947 1 C G - ReadM SNP 0008.scaffold00029 1309975 1 G A - ReadM SNP 0008.scaffold00029 1309996 1 T C - ReadM SNP 0008.scaffold00029 1310134 1 T C - ReadM SNP 0008.scaffold00029 1310214 1 A G - ReadM SNP 0008.scaffold00029 1310320 1 T C - ReadM SNP 0008.scaffold00029 1310328 1 C T - ReadM SNP 0008.scaffold00029 1310375 1 A G - ReadM SNP 0008.scaffold00029 1310395 1 T C - ReadM SNP 0008.scaffold00029 1310648 1 G C - ReadM SNP 0008.scaffold00029 1310790 1 A C - ReadM SNP 0008.scaffold00029 1310808 1 C A - ReadM SNP 0008.scaffold00029 1310861 1 G A - ReadM SNP 0008.scaffold00029 1310880 1 A G - ReadM SNP 0008.scaffold00029 1310904 1 T C - ReadM SNP 0008.scaffold00029 1310949 1 C T - ReadM SNP 0008.scaffold00029 1310970 1 T C - ReadM SNP 0008.scaffold00029 1311175 1 G A - ReadM SNP 0008.scaffold00029 1311186 1 A C - ReadM SNP 0008.scaffold00029 1311276 1 T G - ReadM SNP 0008.scaffold00029 1311296 1 A T - ReadM SNP 0008.scaffold00029 1311439 1 C T - ReadM SNP 0008.scaffold00029 1311593 1 A G - ReadM SNP 0008.scaffold00029 1311621 1 T C - ReadM SNP 0008.scaffold00029 1311654 1 C A - ReadM SNP 0008.scaffold00029 1311730 1 G A - ReadM SNP 0008.scaffold00029 1311957 1 G T - ReadM SNP 0008.scaffold00029 1312075 1 G A - ReadM SNP 0008.scaffold00029 1312080 1 G A - ReadM SNP 0008.scaffold00029 1312098 1 C G - ReadM SNP 0008.scaffold00029 1312291 1 C A - ReadM SNP 0008.scaffold00029 1312299 1 C A - ReadM SNP 0008.scaffold00029 1312314 1 T G - Both SNP 0008.scaffold00029 1312367 1 G A scaffold8150 Both SNP 0008.scaffold00029 1312381 1 T G scaffold8150 Both SNP 0008.scaffold00029 1312441 1 G T scaffold8150 Both SNP 0008.scaffold00029 1312460 1 A T scaffold8150 Both SNP 0008.scaffold00029 1312488 1 G T scaffold8150 ReadM INDEL 0008.scaffold00029 1312526 1 T . - Both SNP 0008.scaffold00029 1312557 1 C A scaffold8150 Both SNP 0008.scaffold00029 1312592 1 C T scaffold8150 Both SNP 0008.scaffold00029 1312656 1 A G scaffold8150 Both INDEL 0008.scaffold00029 1312747 1 A . scaffold8150 Both SNP 0008.scaffold00029 1312777 1 A G scaffold8150 Both SNP 0008.scaffold00029 1312800 1 G A scaffold8150 Both SNP 0008.scaffold00029 1312864 1 A C scaffold8150 Both SNP 0008.scaffold00029 1312902 1 T A scaffold8150 Both INDEL 0008.scaffold00029 1312940 1 . G scaffold8150 Both SNP 0008.scaffold00029 1312975 1 A G scaffold8150 Both SNP 0008.scaffold00029 1313125 1 G A scaffold8150 Both SNP 0008.scaffold00029 1313320 1 T G scaffold8150 Both SNP 0008.scaffold00029 1313374 1 T C scaffold8150 Both SNP 0008.scaffold00029 1313390 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1313418 3 CTT ... scaffold8150 Both SNP 0008.scaffold00029 1313446 1 C T scaffold8150 Both SNP 0008.scaffold00029 1313470 1 A G scaffold8150 Both SNP 0008.scaffold00029 1313518 1 T C scaffold8150 Both SNP 0008.scaffold00029 1313587 1 T A scaffold8150 Both SNP 0008.scaffold00029 1313641 1 C T scaffold8150 Both SNP 0008.scaffold00029 1313653 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1313681 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1313691 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1313720 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1313725 1 C T scaffold8150 Both SNP 0008.scaffold00029 1313740 1 T G scaffold8150 Both SNP 0008.scaffold00029 1313754 1 A G scaffold8150 Both INDEL 0008.scaffold00029 1313881 3 GAA ... scaffold8150 Both SNP 0008.scaffold00029 1313958 1 T A scaffold8150 Both SNP 0008.scaffold00029 1314122 1 G A scaffold8150 Both SNP 0008.scaffold00029 1314162 1 G A scaffold8150 Both SNP 0008.scaffold00029 1314281 1 C G scaffold8150 Both SNP 0008.scaffold00029 1314389 1 C A scaffold8150 Both SNP 0008.scaffold00029 1314568 1 G A scaffold8150 Both SNP 0008.scaffold00029 1314592 1 G C scaffold8150 Both SNP 0008.scaffold00029 1314595 1 T C scaffold8150 Both SNP 0008.scaffold00029 1314658 1 A G scaffold8150 Both SNP 0008.scaffold00029 1314714 1 T G scaffold8150 Both SNP 0008.scaffold00029 1314804 1 A T scaffold8150 Both INDEL 0008.scaffold00029 1314814 1 A . scaffold8150 ScafM SNP 0008.scaffold00029 1314822 1 A G scaffold8150 Both SNP 0008.scaffold00029 1314856 1 A G scaffold8150 Both SNP 0008.scaffold00029 1314887 1 A G scaffold8150 Both SNP 0008.scaffold00029 1314967 1 C T scaffold8150 Both SNP 0008.scaffold00029 1314989 1 A T scaffold8150 Both SNP 0008.scaffold00029 1315016 1 G T scaffold8150 ScafM SNP 0008.scaffold00029 1315104 1 G T scaffold8150 ScafM SNP 0008.scaffold00029 1315106 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1315112 1 A G scaffold8150 Both SNP 0008.scaffold00029 1315136 1 A C scaffold8150 Both SNP 0008.scaffold00029 1315172 1 G A scaffold8150 Both SNP 0008.scaffold00029 1315211 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1315249 1 G C scaffold8150 ScafM SNP 0008.scaffold00029 1315252 3 CCG GGA scaffold8150 ScafM SNP 0008.scaffold00029 1315280 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1315326 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1315346 2 GC AA scaffold8150 ScafM SNP 0008.scaffold00029 1315381 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1315392 2 AG .. scaffold8150 ScafM SNP 0008.scaffold00029 1315413 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1315416 1 A G scaffold8150 Both SNP 0008.scaffold00029 1315463 1 C T scaffold8150 Both SNP 0008.scaffold00029 1315671 1 T C scaffold8150 Both SNP 0008.scaffold00029 1315741 1 C G scaffold8150 Both SNP 0008.scaffold00029 1315759 1 T C scaffold8150 Both SNP 0008.scaffold00029 1315890 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1315908 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1315916 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1315927 2 AC GA scaffold8150 Both SNP 0008.scaffold00029 1316012 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1316103 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1316105 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1316107 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1316124 1 G C scaffold8150 ScafM SNP 0008.scaffold00029 1316130 2 AA CG scaffold8150 ScafM SNP 0008.scaffold00029 1316198 1 A G scaffold8150 ScafM SNP 0008.scaffold00029 1316203 1 T C scaffold8150 ScafM INDEL 0008.scaffold00029 1316205 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1316227 1 T C scaffold8150 Both SNP 0008.scaffold00029 1316297 1 G T scaffold8150 Both SNP 0008.scaffold00029 1316316 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1316408 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1316411 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1316444 2 TT CA scaffold8150 ScafM INDEL 0008.scaffold00029 1316474 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1316477 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1316501 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1316524 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1316527 2 CT AC scaffold8150 ReadM SNP 0008.scaffold00029 1316779 1 A T - ReadM SNP 0008.scaffold00029 1316832 1 C T - ReadM SNP 0008.scaffold00029 1316883 1 C G - ScafM SNP 0008.scaffold00029 1317031 1 A C scaffold8150 ScafM SNP 0008.scaffold00029 1317061 1 A T scaffold8150 ScafM SNP 0008.scaffold00029 1317064 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1317076 3 CAA TCG scaffold8150 ScafM SNP 0008.scaffold00029 1317080 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1317085 1 C A scaffold8150 ScafM SNP 0008.scaffold00029 1317097 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1317111 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1317118 1 A G scaffold8150 ScafM INDEL 0008.scaffold00029 1317141 7 CTGGCAG ....... scaffold8150 ScafM SNP 0008.scaffold00029 1317155 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1317158 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1317162 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1317189 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1317193 2 AA CT scaffold8150 ScafM SNP 0008.scaffold00029 1317201 1 G T scaffold8150 ScafM INDEL 0008.scaffold00029 1317860 1 . T scaffold4037 ScafM SNP 0008.scaffold00029 1317886 1 A C scaffold4037 ScafM SNP 0008.scaffold00029 1318290 1 A C scaffold8150 ScafM INDEL 0008.scaffold00029 1318300 1 . A scaffold8150 ScafM SNP 0008.scaffold00029 1318326 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1318336 4 .... AAAA scaffold8150 ScafM SNP 0008.scaffold00029 1318475 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318516 1 T G scaffold8150 ScafM SNP 0008.scaffold00029 1318518 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318520 1 T A scaffold8150 ScafM SNP 0008.scaffold00029 1318523 1 C T scaffold8150 ScafM INDEL 0008.scaffold00029 1318555 1 . T scaffold8150 ScafM SNP 0008.scaffold00029 1318597 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1318608 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1318622 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1318643 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1318658 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318662 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1318666 1 G C scaffold8150 ScafM SNP 0008.scaffold00029 1318674 1 C G scaffold8150 ScafM SNP 0008.scaffold00029 1318699 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1318705 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318708 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318730 1 C T scaffold8150 ScafM SNP 0008.scaffold00029 1318743 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318752 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318771 1 G T scaffold8150 ScafM SNP 0008.scaffold00029 1318780 1 G A scaffold8150 ScafM SNP 0008.scaffold00029 1318796 1 T C scaffold8150 ScafM SNP 0008.scaffold00029 1318807 2 AA GC scaffold8150 ScafM SNP 0008.scaffold00029 1319089 1 T A scaffold36781 ScafM SNP 0008.scaffold00029 1319096 1 C T scaffold36781 ScafM SNP 0008.scaffold00029 1320792 1 G T scaffold32325 ScafM SNP 0008.scaffold00029 1320832 1 T G scaffold32325 ScafM SNP 0008.scaffold00029 1321109 1 G A scaffold32325 ScafM SNP 0008.scaffold00029 1321165 1 A T scaffold32325 ScafM SNP 0008.scaffold00029 1321189 2 AA TT scaffold32325 ScafM SNP 0008.scaffold00029 1321211 1 G C scaffold32325 ReadM SNP 0008.scaffold00029 1321248 1 T A - ReadM SNP 0008.scaffold00029 1321279 1 G A - ReadM SNP 0008.scaffold00029 1321372 1 G C - ScafM SNP 0008.scaffold00029 1321580 1 G A scaffold32325 ScafM SNP 0008.scaffold00029 1321617 1 A G scaffold32325 ScafM SNP 0008.scaffold00029 1321630 1 A C scaffold32325 ScafM INDEL 0008.scaffold00029 1321706 1 . A scaffold32325 ScafM SNP 0008.scaffold00029 1321735 1 T A scaffold32325 ScafM SNP 0008.scaffold00029 1321779 2 AT GC scaffold32325 ScafM SNP 0008.scaffold00029 1321785 1 A G scaffold32325 ScafM SNP 0008.scaffold00029 1321800 1 T C scaffold32325 ScafM INDEL 0008.scaffold00029 1321808 1 . T scaffold32325 ScafM SNP 0008.scaffold00029 1321814 1 T C scaffold32325 ReadM SNP 0008.scaffold00029 1331173 1 C T - ReadM SNP 0008.scaffold00029 1331217 1 G T - ReadM SNP 0008.scaffold00029 1331312 1 C T - ReadM SNP 0008.scaffold00029 1331343 1 G A - ReadM INDEL 0008.scaffold00029 1331425 1 . C - ReadM SNP 0008.scaffold00029 1331455 1 C T - ReadM SNP 0008.scaffold00029 1331563 1 A G - ReadM SNP 0008.scaffold00029 1331703 1 C T - ReadM SNP 0008.scaffold00029 1331712 1 T C - ReadM SNP 0008.scaffold00029 1331811 1 C G - ReadM INDEL 0008.scaffold00029 1331891 2 .. TA - ReadM SNP 0008.scaffold00029 1331896 1 C T - ReadM SNP 0008.scaffold00029 1332242 1 G A - ReadM SNP 0008.scaffold00029 1332303 1 C T - ReadM SNP 0008.scaffold00029 1332328 1 A G - ReadM SNP 0008.scaffold00029 1332754 1 C T - ReadM SNP 0008.scaffold00029 1332809 1 G T - ReadM SNP 0008.scaffold00029 1332846 1 G A - ReadM SNP 0008.scaffold00029 1333010 1 A G - ReadM SNP 0008.scaffold00029 1333337 1 G A - ReadM SNP 0008.scaffold00029 1333404 1 C A - ReadM SNP 0008.scaffold00029 1333489 1 C A - ReadM SNP 0008.scaffold00029 1333544 1 A G - ReadM SNP 0008.scaffold00029 1333583 1 G A - ReadM SNP 0008.scaffold00029 1333762 1 C T - ReadM SNP 0008.scaffold00029 1334007 1 A C - ReadM SNP 0008.scaffold00029 1334059 1 T C - ReadM SNP 0008.scaffold00029 1334282 1 G T - ReadM SNP 0008.scaffold00029 1334371 1 T C - ReadM SNP 0008.scaffold00029 1334382 1 G A - ReadM SNP 0008.scaffold00029 1334417 1 T A - ReadM SNP 0008.scaffold00029 1334543 1 A C - Both SNP 0008.scaffold00029 1334813 1 G A scaffold32325 Both SNP 0008.scaffold00029 1334816 1 G A scaffold32325 Both SNP 0008.scaffold00029 1334871 1 A G scaffold32325 Both SNP 0008.scaffold00029 1334922 1 T A scaffold32325 Both SNP 0008.scaffold00029 1335028 1 A G scaffold32325 Both SNP 0008.scaffold00029 1335207 1 T C scaffold32325 ScafM SNP 0008.scaffold00029 1335264 1 A G scaffold32325 Both SNP 0008.scaffold00029 1335282 1 A C scaffold32325 Both SNP 0008.scaffold00029 1335364 1 T A scaffold32325 ScafM INDEL 0008.scaffold00029 1335398 60 TCAAATATCTGAATCCAAGACTTTCCGTTAAGCTACTTCTGAAAAATTGAGGTTAGGCTA ............................................................ scaffold32325 ScafM INDEL 0008.scaffold00029 1335462 11 TAATTCTTTTA ........... scaffold32325 ScafM INDEL 0008.scaffold00029 1335475 13 ATTGGAAAGTAAC ............. scaffold32325 ScafM INDEL 0008.scaffold00029 1335489 2 TT .. scaffold32325 Both SNP 0008.scaffold00029 1335522 1 A T scaffold32325 Both SNP 0008.scaffold00029 1335550 1 C T scaffold32325 Both SNP 0008.scaffold00029 1335585 1 T C scaffold32325 Both SNP 0008.scaffold00029 1335613 1 T C scaffold32325 Both SNP 0008.scaffold00029 1335947 1 A G scaffold32325 Both SNP 0008.scaffold00029 1335957 1 C T scaffold32325 Both SNP 0008.scaffold00029 1335983 1 C T scaffold32325 Both SNP 0008.scaffold00029 1336017 1 A G scaffold32325 Both SNP 0008.scaffold00029 1336023 1 G A scaffold32325 ScafM SNP 0008.scaffold00029 1336192 2 TA AG scaffold32325 ScafM SNP 0008.scaffold00029 1336195 1 C T scaffold32325 ScafM SNP 0008.scaffold00029 1336225 1 T C scaffold32325 ScafM SNP 0008.scaffold00029 1336237 1 G A scaffold32325 ScafM INDEL 0008.scaffold00029 1336243 7 AAAAACA ....... scaffold32325 ScafM SNP 0008.scaffold00029 1336255 1 A G scaffold32325 ScafM SNP 0008.scaffold00029 1336272 1 C T scaffold32325 ScafM SNP 0008.scaffold00029 1336278 1 G A scaffold32325 ScafM SNP 0008.scaffold00029 1336283 1 G C scaffold32325 ScafM SNP 0008.scaffold00029 1336291 1 T C scaffold32325 ScafM SNP 0008.scaffold00029 1336293 1 T C scaffold32325 ReadM INDEL 0008.scaffold00029 1336571 1 . A - ScafM INDEL 0008.scaffold00029 1336571 2 .T AA scaffold32325 ScafM SNP 0008.scaffold00029 1336630 1 A G scaffold32325 ScafM INDEL 0008.scaffold00029 1336633 1 . T scaffold32325 ScafM SNP 0008.scaffold00029 1336639 1 A T scaffold32325 Both SNP 0008.scaffold00029 1336672 1 C A scaffold32325 Both SNP 0008.scaffold00029 1336953 1 T C scaffold32325 Both SNP 0008.scaffold00029 1336956 1 A G scaffold32325 Both SNP 0008.scaffold00029 1336994 1 A T scaffold32325 Both INDEL 0008.scaffold00029 1337106 1 . T scaffold32325 ScafM SNP 0008.scaffold00029 1337110 1 A T scaffold32325 ReadM SNP 0008.scaffold00029 1337246 1 T G - ReadM SNP 0008.scaffold00029 1337273 1 C T - ReadM SNP 0008.scaffold00029 1337298 1 A G - ScafM SNP 0008.scaffold00029 1337366 1 G A scaffold32325 ScafM INDEL 0008.scaffold00029 1337388 1 . T scaffold32325 ScafM INDEL 0008.scaffold00029 1337399 1 A . scaffold32325 ScafM SNP 0008.scaffold00029 1337423 1 T C scaffold32325 ReadM SNP 0008.scaffold00029 1337479 1 A G - ReadM SNP 0008.scaffold00029 1337519 1 T C - ReadM SNP 0008.scaffold00029 1337570 1 T C - ReadM SNP 0008.scaffold00029 1337582 1 C T - ReadM SNP 0008.scaffold00029 1337618 1 A G - ReadM SNP 0008.scaffold00029 1337808 2 GT AA - Both SNP 0008.scaffold00029 1338011 1 T G scaffold32325 Both SNP 0008.scaffold00029 1338028 1 C A scaffold32325 Both SNP 0008.scaffold00029 1338099 1 C G scaffold32325 ScafM SNP 0008.scaffold00029 1338257 1 C T scaffold32325 Both INDEL 0008.scaffold00029 1338431 3 TAA ... scaffold32325 Both SNP 0008.scaffold00029 1338563 1 A G scaffold32325 Both SNP 0008.scaffold00029 1338579 1 A G scaffold32325 Both SNP 0008.scaffold00029 1339016 1 A G scaffold32325 Both SNP 0008.scaffold00029 1339146 1 T A scaffold32325 Both SNP 0008.scaffold00029 1339244 1 A G scaffold32325 ScafM INDEL 0008.scaffold00029 1339373 34 TTTTTTTTTTTCGAATCGAATCTAAGATAATAAT .................................. scaffold32325 Both SNP 0008.scaffold00029 1339433 1 C T scaffold32325 Both SNP 0008.scaffold00029 1339485 1 G A scaffold32325 ReadM SNP 0008.scaffold00029 1339635 1 T C - ReadM SNP 0008.scaffold00029 1339641 1 T C - ReadM SNP 0008.scaffold00029 1339657 1 T C - ReadM SNP 0008.scaffold00029 1339696 1 G A - ReadM SNP 0008.scaffold00029 1339735 1 A C - ReadM SNP 0008.scaffold00029 1339847 1 A G - ReadM SNP 0008.scaffold00029 1339851 1 C A - ReadM SNP 0008.scaffold00029 1339891 1 T C - ScafM INDEL 0008.scaffold00029 1340032 2 .. CA scaffold32325 ScafM INDEL 0008.scaffold00029 1340033 1 . A scaffold32325 ScafM SNP 0008.scaffold00029 1341224 1 A G scaffold32325 ScafM SNP 0008.scaffold00029 1341235 1 G A scaffold32325 ScafM INDEL 0008.scaffold00029 1341248 1 C . scaffold32325 ScafM SNP 0008.scaffold00029 1341262 1 T C scaffold32325 ScafM SNP 0008.scaffold00029 1341325 1 C T scaffold32325 ScafM SNP 0008.scaffold00029 1341525 1 A G scaffold32325 ReadM SNP 0008.scaffold00029 1341673 1 C T - ReadM SNP 0008.scaffold00029 1341717 1 G T - ReadM SNP 0008.scaffold00029 1342017 1 T A - ReadM SNP 0008.scaffold00029 1342332 1 A G - ReadM SNP 0008.scaffold00029 1342381 1 T C - ReadM SNP 0008.scaffold00029 1342429 1 A C - ReadM SNP 0008.scaffold00029 1342513 1 T C - ReadM SNP 0008.scaffold00029 1342605 1 T C - ReadM SNP 0008.scaffold00029 1342673 1 G A - Both SNP 0008.scaffold00029 1342753 1 A G scaffold32325 ReadM SNP 0008.scaffold00029 1343066 1 G A - ReadM SNP 0008.scaffold00029 1343104 1 T G - ReadM SNP 0008.scaffold00029 1343185 1 G A - ReadM SNP 0008.scaffold00029 1343192 1 A C - ReadM SNP 0008.scaffold00029 1343279 1 T C - ReadM SNP 0008.scaffold00029 1344103 1 G A - ScafM SNP 0008.scaffold00029 1345674 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1345683 1 C T scaffold8277 ReadM SNP 0008.scaffold00029 1345719 1 T C - ScafM SNP 0008.scaffold00029 1345721 1 A G scaffold8277 ScafM SNP 0008.scaffold00029 1345736 1 A G scaffold8277 ScafM SNP 0008.scaffold00029 1345739 1 A C scaffold8277 ScafM SNP 0008.scaffold00029 1345750 1 C T scaffold8277 ScafM SNP 0008.scaffold00029 1345767 1 G A scaffold8277 ScafM SNP 0008.scaffold00029 1345770 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1345772 1 G A scaffold8277 ScafM SNP 0008.scaffold00029 1345784 1 A T scaffold8277 ScafM SNP 0008.scaffold00029 1345803 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1345833 1 G A scaffold8277 ScafM SNP 0008.scaffold00029 1345883 1 C T scaffold8277 ScafM SNP 0008.scaffold00029 1345888 1 G A scaffold8277 ScafM SNP 0008.scaffold00029 1345891 1 A T scaffold8277 ScafM SNP 0008.scaffold00029 1345910 1 A C scaffold8277 ScafM SNP 0008.scaffold00029 1345925 1 A G scaffold8277 ScafM SNP 0008.scaffold00029 1345945 1 T A scaffold8277 ReadM SNP 0008.scaffold00029 1346507 1 T C - ReadM INDEL 0008.scaffold00029 1346709 1 . C - ReadM SNP 0008.scaffold00029 1346744 1 C T - ReadM SNP 0008.scaffold00029 1346991 1 G A - ReadM SNP 0008.scaffold00029 1347370 1 T C - ReadM SNP 0008.scaffold00029 1347548 1 C T - ReadM SNP 0008.scaffold00029 1348451 1 A G - ReadM SNP 0008.scaffold00029 1348459 1 A G - ReadM SNP 0008.scaffold00029 1348599 1 C T - ReadM SNP 0008.scaffold00029 1348632 1 C T - ReadM SNP 0008.scaffold00029 1349186 1 C T - ReadM SNP 0008.scaffold00029 1349260 1 C T - ReadM SNP 0008.scaffold00029 1349285 1 G A - ReadM SNP 0008.scaffold00029 1349371 1 C A - ReadM SNP 0008.scaffold00029 1349648 1 G A - ReadM SNP 0008.scaffold00029 1349787 1 T C - ReadM SNP 0008.scaffold00029 1349993 1 C G - ReadM SNP 0008.scaffold00029 1350069 1 C T - ReadM SNP 0008.scaffold00029 1350630 1 G A - ReadM SNP 0008.scaffold00029 1351357 1 G A - ScafM SNP 0008.scaffold00029 1351542 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351545 1 T C scaffold8277 ScafM INDEL 0008.scaffold00029 1351563 1 . A scaffold8277 ScafM SNP 0008.scaffold00029 1351585 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351592 1 A G scaffold8277 ScafM INDEL 0008.scaffold00029 1351602 2 .. CG scaffold8277 ScafM SNP 0008.scaffold00029 1351624 1 A T scaffold8277 ScafM SNP 0008.scaffold00029 1351652 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351668 1 A G scaffold8277 ScafM INDEL 0008.scaffold00029 1351670 2 AA .. scaffold8277 ScafM SNP 0008.scaffold00029 1351680 2 TA CG scaffold8277 ScafM SNP 0008.scaffold00029 1351688 2 CC TT scaffold8277 ScafM SNP 0008.scaffold00029 1351691 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351698 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351731 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351734 1 T C scaffold8277 ScafM SNP 0008.scaffold00029 1351758 1 A G scaffold8277 ScafM SNP 0008.scaffold00029 1351767 1 T G scaffold8277 ScafM INDEL 0008.scaffold00029 1351783 1 . A scaffold8277 ScafM SNP 0008.scaffold00029 1351826 1 T G scaffold8277 ScafM INDEL 0008.scaffold00029 1351852 8 ........ AAAAAATG scaffold8277 ScafM INDEL 0008.scaffold00029 1351854 2 .. AG scaffold8277 ScafM SNP 0008.scaffold00029 1351874 1 A G scaffold8277 ScafM SNP 0008.scaffold00029 1351889 1 G T scaffold8277 ScafM SNP 0008.scaffold00029 1351907 1 C T scaffold8277 ScafM SNP 0008.scaffold00029 1352618 1 C T scaffold19081 ScafM INDEL 0008.scaffold00029 1353864 3 ... TTA scaffold19081 ReadM SNP 0008.scaffold00029 1354771 1 C T - ReadM SNP 0008.scaffold00029 1354801 1 G T - ReadM INDEL 0008.scaffold00029 1355371 1 . A - ReadM SNP 0008.scaffold00029 1355378 1 T G - ReadM INDEL 0008.scaffold00029 1355486 2 TA .. - ReadM SNP 0008.scaffold00029 1355645 1 A C - ReadM SNP 0008.scaffold00029 1355829 1 T C - ReadM SNP 0008.scaffold00029 1356367 1 A C - ReadM SNP 0008.scaffold00029 1356852 1 T G - ReadM SNP 0008.scaffold00029 1357127 1 C G - ScafM SNP 0008.scaffold00029 1357383 1 A G scaffold19081 ScafM SNP 0008.scaffold00029 1357398 1 G A scaffold19081 ScafM SNP 0008.scaffold00029 1357435 1 A G scaffold19081 ScafM SNP 0008.scaffold00029 1357457 1 A C scaffold19081 ScafM SNP 0008.scaffold00029 1357462 1 C T scaffold19081 ScafM SNP 0008.scaffold00029 1357472 1 G A scaffold19081 ScafM SNP 0008.scaffold00029 1357478 1 T A scaffold19081 ScafM SNP 0008.scaffold00029 1357488 2 GG AA scaffold19081 ScafM INDEL 0008.scaffold00029 1357546 2 .. TA scaffold19081 ScafM SNP 0008.scaffold00029 1357550 1 C A scaffold19081 ScafM INDEL 0008.scaffold00029 1357631 2 AT .. scaffold19081 ScafM SNP 0008.scaffold00029 1357651 1 C G scaffold19081 ScafM INDEL 0008.scaffold00029 1357680 2 AG .. scaffold19081 ScafM INDEL 0008.scaffold00029 1357688 2 AA .. scaffold19081 ScafM SNP 0008.scaffold00029 1357694 1 T C scaffold19081 ScafM INDEL 0008.scaffold00029 1357716 1 . T scaffold19081 ScafM SNP 0008.scaffold00029 1358835 1 G A scaffold26706 ScafM INDEL 0008.scaffold00029 1358842 4 .... ATGC scaffold26706 ScafM SNP 0008.scaffold00029 1358855 1 G A scaffold26706 ScafM SNP 0008.scaffold00029 1358868 1 A C scaffold26706 ScafM SNP 0008.scaffold00029 1358873 1 C G scaffold26706 ScafM SNP 0008.scaffold00029 1358877 1 C T scaffold26706 ScafM SNP 0008.scaffold00029 1358910 1 T C scaffold26706 ScafM SNP 0008.scaffold00029 1358929 1 A C scaffold26706 ScafM SNP 0008.scaffold00029 1358938 1 C A scaffold26706 ScafM SNP 0008.scaffold00029 1358954 1 T C scaffold26706 ScafM SNP 0008.scaffold00029 1359044 1 A G scaffold26706 ScafM SNP 0008.scaffold00029 1359046 1 A G scaffold26706 ScafM SNP 0008.scaffold00029 1359069 1 G T scaffold26706 ScafM INDEL 0008.scaffold00029 1359356 2 AT .. scaffold56238 ScafM SNP 0008.scaffold00029 1359366 1 C T scaffold56238 ScafM SNP 0008.scaffold00029 1359397 1 G A scaffold56238 ScafM SNP 0008.scaffold00029 1359432 1 A G scaffold56238 ScafM SNP 0008.scaffold00029 1359449 1 A G scaffold56238 ScafM INDEL 0008.scaffold00029 1359460 7 TACTTAA ....... scaffold56238 ScafM SNP 0008.scaffold00029 1359493 1 C T scaffold56238 ScafM SNP 0008.scaffold00029 1359515 1 T C scaffold56238 ScafM SNP 0008.scaffold00029 1359586 1 A G scaffold56238 ScafM SNP 0008.scaffold00029 1359612 1 T G scaffold56238 ScafM SNP 0008.scaffold00029 1359624 1 A G scaffold56238 ScafM SNP 0008.scaffold00029 1359642 1 A C scaffold56238 ScafM SNP 0008.scaffold00029 1359679 2 TA CC scaffold56238 ScafM INDEL 0008.scaffold00029 1359716 3 ... ATA scaffold56238 ScafM SNP 0008.scaffold00029 1359722 1 C A scaffold56238 ReadM SNP 0008.scaffold00029 1359762 1 A G - ReadM SNP 0008.scaffold00029 1359775 1 G C - ReadM SNP 0008.scaffold00029 1359793 1 A G - ReadM SNP 0008.scaffold00029 1360044 1 T C - ReadM SNP 0008.scaffold00029 1360237 1 G A - ReadM SNP 0008.scaffold00029 1361707 1 T C - ReadM SNP 0008.scaffold00029 1361714 1 G A - ReadM SNP 0008.scaffold00029 1361739 1 G C - ReadM SNP 0008.scaffold00029 1361862 1 A C - ReadM SNP 0008.scaffold00029 1361950 1 T G - ReadM SNP 0008.scaffold00029 1362001 1 T C - ReadM SNP 0008.scaffold00029 1362071 1 C T - ReadM SNP 0008.scaffold00029 1362097 1 G A - ReadM SNP 0008.scaffold00029 1362310 1 C G - Both SNP 0008.scaffold00029 1362759 1 G T scaffold1870 Both SNP 0008.scaffold00029 1363035 1 G A scaffold1870 Both SNP 0008.scaffold00029 1363153 1 A T scaffold1870 Both SNP 0008.scaffold00029 1363183 1 T C scaffold1870 Both SNP 0008.scaffold00029 1363436 1 A C scaffold1870 Both SNP 0008.scaffold00029 1363726 1 C T scaffold1870 Both SNP 0008.scaffold00029 1363758 1 G A scaffold1870 Both SNP 0008.scaffold00029 1363767 1 A G scaffold1870 ScafM SNP 0008.scaffold00029 1363857 2 TG AA scaffold1870 Both SNP 0008.scaffold00029 1363874 1 T C scaffold1870 Both SNP 0008.scaffold00029 1364000 1 A C scaffold1870 Both SNP 0008.scaffold00029 1364041 1 A G scaffold1870 Both SNP 0008.scaffold00029 1364204 1 C T scaffold1870 Both SNP 0008.scaffold00029 1364261 1 A G scaffold1870 Both SNP 0008.scaffold00029 1364314 1 T C scaffold1870 ReadM INDEL 0008.scaffold00029 1364395 1 . A - ScafM INDEL 0008.scaffold00029 1364395 2 .G AT scaffold1870 ReadM INDEL 0008.scaffold00029 1364490 1 G . - ReadM SNP 0008.scaffold00029 1364521 1 G A - ReadM SNP 0008.scaffold00029 1364753 1 G A - ReadM SNP 0008.scaffold00029 1364784 1 A G - ReadM SNP 0008.scaffold00029 1364848 1 C G - ReadM SNP 0008.scaffold00029 1364856 1 A G - ReadM INDEL 0008.scaffold00029 1364945 1 . G - ReadM SNP 0008.scaffold00029 1365027 1 A T - ReadM SNP 0008.scaffold00029 1365126 1 C T - ReadM SNP 0008.scaffold00029 1365143 1 A G - ReadM SNP 0008.scaffold00029 1365167 1 A G - ReadM SNP 0008.scaffold00029 1365298 1 T C - ReadM SNP 0008.scaffold00029 1365359 1 C T - ReadM SNP 0008.scaffold00029 1365378 1 T C - ReadM SNP 0008.scaffold00029 1365420 1 C T - ReadM SNP 0008.scaffold00029 1365427 1 A G - ReadM SNP 0008.scaffold00029 1365459 1 A G - ReadM SNP 0008.scaffold00029 1365581 1 A G - ReadM SNP 0008.scaffold00029 1365592 1 A C - ReadM SNP 0008.scaffold00029 1365650 1 A T - ReadM SNP 0008.scaffold00029 1365684 1 G A - ReadM INDEL 0008.scaffold00029 1365699 1 A . - ReadM SNP 0008.scaffold00029 1365725 1 G C - ReadM SNP 0008.scaffold00029 1365805 1 T C - ReadM SNP 0008.scaffold00029 1365860 1 A T - ReadM SNP 0008.scaffold00029 1365937 1 T C - ReadM SNP 0008.scaffold00029 1366002 2 GT AC - ReadM SNP 0008.scaffold00029 1366044 1 T A - ReadM SNP 0008.scaffold00029 1366056 1 C A - ReadM SNP 0008.scaffold00029 1366084 1 C A - ReadM SNP 0008.scaffold00029 1366149 1 C T - ReadM SNP 0008.scaffold00029 1366293 1 G A - ReadM SNP 0008.scaffold00029 1366369 1 A C - ReadM SNP 0008.scaffold00029 1366405 2 GC AT - ReadM SNP 0008.scaffold00029 1366500 1 C T - ReadM SNP 0008.scaffold00029 1366517 1 T C - ReadM SNP 0008.scaffold00029 1366663 1 T G - ReadM SNP 0008.scaffold00029 1366727 1 T C - ReadM SNP 0008.scaffold00029 1367029 1 G A - ReadM SNP 0008.scaffold00029 1367328 1 A T - ReadM SNP 0008.scaffold00029 1367366 1 A G - Both SNP 0008.scaffold00029 1367617 1 C T scaffold1870 ScafM SNP 0008.scaffold00029 1367771 1 A G scaffold1870 ScafM SNP 0008.scaffold00029 1367774 1 T G scaffold1870 Both SNP 0008.scaffold00029 1367798 1 G C scaffold1870 Both SNP 0008.scaffold00029 1367853 1 T C scaffold1870 ReadM SNP 0008.scaffold00029 1367958 1 A T - ReadM SNP 0008.scaffold00029 1368042 1 G A - ReadM SNP 0008.scaffold00029 1368065 1 G A - ReadM SNP 0008.scaffold00029 1368139 1 G A - ReadM SNP 0008.scaffold00029 1368267 1 G A - Both SNP 0008.scaffold00029 1368417 1 C T scaffold1870 Both SNP 0008.scaffold00029 1368473 1 G C scaffold1870 Both SNP 0008.scaffold00029 1368507 2 CA TG scaffold1870 Both SNP 0008.scaffold00029 1368611 1 C T scaffold1870 Both SNP 0008.scaffold00029 1368844 1 T C scaffold1870 ReadM SNP 0008.scaffold00029 1369168 1 T C - ReadM SNP 0008.scaffold00029 1369271 1 A T - ReadM SNP 0008.scaffold00029 1369314 1 T C - ReadM SNP 0008.scaffold00029 1369328 1 C T - ReadM SNP 0008.scaffold00029 1369407 1 C T - ReadM SNP 0008.scaffold00029 1369491 1 G A - ReadM SNP 0008.scaffold00029 1369520 1 C T - ReadM SNP 0008.scaffold00029 1369547 1 C T - ReadM SNP 0008.scaffold00029 1369654 1 A G - ReadM SNP 0008.scaffold00029 1369678 1 A C - ReadM SNP 0008.scaffold00029 1369766 1 T G - ReadM SNP 0008.scaffold00029 1369834 1 G A - ReadM SNP 0008.scaffold00029 1369928 1 T A - ReadM SNP 0008.scaffold00029 1369939 1 T C - ReadM SNP 0008.scaffold00029 1370026 1 G A - ReadM SNP 0008.scaffold00029 1370112 1 C T - ReadM INDEL 0008.scaffold00029 1370159 1 . A - ReadM SNP 0008.scaffold00029 1370219 1 T A - ReadM SNP 0008.scaffold00029 1370269 1 C A - ReadM SNP 0008.scaffold00029 1370350 1 A T - ReadM SNP 0008.scaffold00029 1370358 1 A G - ReadM SNP 0008.scaffold00029 1370408 1 A G - ReadM SNP 0008.scaffold00029 1370435 1 C T - ReadM SNP 0008.scaffold00029 1370490 1 G A - ReadM SNP 0008.scaffold00029 1370607 1 A G - ReadM SNP 0008.scaffold00029 1370776 1 T C - ReadM SNP 0008.scaffold00029 1370781 1 C T - ReadM SNP 0008.scaffold00029 1370800 1 G C - ReadM SNP 0008.scaffold00029 1370958 1 G A - Both SNP 0008.scaffold00029 1371104 1 G A scaffold1870 Both SNP 0008.scaffold00029 1371108 1 T C scaffold1870 ReadM SNP 0008.scaffold00029 1371158 1 T C - ReadM SNP 0008.scaffold00029 1371352 1 A C - ReadM SNP 0008.scaffold00029 1371514 1 A G - ReadM SNP 0008.scaffold00029 1371694 1 A G - ReadM SNP 0008.scaffold00029 1371844 1 T C - ReadM SNP 0008.scaffold00029 1371980 1 A T - ReadM SNP 0008.scaffold00029 1371992 1 T C - ReadM SNP 0008.scaffold00029 1372104 1 T A - ReadM SNP 0008.scaffold00029 1372423 1 G T - ReadM SNP 0008.scaffold00029 1372440 1 G A - ReadM SNP 0008.scaffold00029 1372462 1 T A - ReadM SNP 0008.scaffold00029 1372658 1 G C - ReadM SNP 0008.scaffold00029 1372734 1 A G - ReadM SNP 0008.scaffold00029 1373096 1 A G - ReadM SNP 0008.scaffold00029 1373296 1 G C - ReadM SNP 0008.scaffold00029 1373322 1 T C - ReadM SNP 0008.scaffold00029 1373421 1 A G - ReadM SNP 0008.scaffold00029 1373424 1 G A - ReadM SNP 0008.scaffold00029 1373529 1 A G - ReadM SNP 0008.scaffold00029 1373725 1 T G - ReadM SNP 0008.scaffold00029 1373754 1 A G - ReadM SNP 0008.scaffold00029 1373781 1 G A - ReadM SNP 0008.scaffold00029 1373831 1 C T - Both SNP 0008.scaffold00029 1373932 1 A C scaffold1870 Both SNP 0008.scaffold00029 1374121 1 G T scaffold1870 Both SNP 0008.scaffold00029 1374286 1 G T scaffold1870 Both SNP 0008.scaffold00029 1374417 2 GT CA scaffold1870 Both SNP 0008.scaffold00029 1374433 1 T C scaffold1870 Both SNP 0008.scaffold00029 1374519 1 T G scaffold1870 ReadM SNP 0008.scaffold00029 1374542 1 A T - ReadM SNP 0008.scaffold00029 1374670 1 C A - Both SNP 0008.scaffold00029 1374988 1 T A scaffold1870 ScafM INDEL 0008.scaffold00029 1375078 15 TATCATTTCTTAGCA ............... scaffold1870 ScafM INDEL 0008.scaffold00029 1375095 3 TAG ... scaffold1870 ScafM INDEL 0008.scaffold00029 1375099 5 GGTTT ..... scaffold1870 ScafM INDEL 0008.scaffold00029 1375107 3 ATT ... scaffold1870 ScafM SNP 0008.scaffold00029 1375111 1 C A scaffold1870 ScafM INDEL 0008.scaffold00029 1375113 1 C . scaffold1870 ScafM SNP 0008.scaffold00029 1375232 1 C T scaffold1870 ScafM SNP 0008.scaffold00029 1375290 1 C A scaffold1870 ScafM INDEL 0008.scaffold00029 1375689 2 .A CC scaffold1870 ScafM INDEL 0008.scaffold00029 1375773 1 . A scaffold1870 ScafM SNP 0008.scaffold00029 1375888 1 T C scaffold1870 ScafM SNP 0008.scaffold00029 1375990 1 G C scaffold1870 ScafM INDEL 0008.scaffold00029 1375998 1 A . scaffold1870 ReadM SNP 0008.scaffold00029 1376234 1 G C - ReadM SNP 0008.scaffold00029 1376317 1 A C - ReadM SNP 0008.scaffold00029 1376333 1 T C - ReadM SNP 0008.scaffold00029 1376358 1 C T - ReadM SNP 0008.scaffold00029 1376417 1 C T - Both SNP 0008.scaffold00029 1376646 1 A G scaffold1870 Both SNP 0008.scaffold00029 1376678 1 G A scaffold1870 ScafM INDEL 0008.scaffold00029 1376787 3 ... AAA scaffold1870 ScafM SNP 0008.scaffold00029 1376796 1 C T scaffold1870 Both SNP 0008.scaffold00029 1376809 1 A G scaffold1870 ReadM INDEL 0008.scaffold00029 1376907 3 AAT ... - Both INDEL 0008.scaffold00029 1377166 2 GT .. scaffold1870 Both INDEL 0008.scaffold00029 1377324 1 T . scaffold1870 Both SNP 0008.scaffold00029 1377376 1 C A scaffold1870 Both SNP 0008.scaffold00029 1377449 1 T A scaffold1870 Both SNP 0008.scaffold00029 1377463 1 T C scaffold1870 Both INDEL 0008.scaffold00029 1377512 1 A . scaffold1870 ReadM SNP 0008.scaffold00029 1377633 1 A C - ScafM SNP 0008.scaffold00029 1378202 1 T A scaffold1870 ScafM INDEL 0008.scaffold00029 1378203 2 .. AT scaffold1870 ScafM SNP 0008.scaffold00029 1378370 1 G A scaffold1870 ScafM SNP 0008.scaffold00029 1378380 1 C T scaffold1870 ScafM SNP 0008.scaffold00029 1378384 1 T C scaffold1870 ScafM SNP 0008.scaffold00029 1378391 1 T G scaffold1870 ScafM SNP 0008.scaffold00029 1378487 1 C A scaffold1870 ScafM INDEL 0008.scaffold00029 1378495 1 . A scaffold1870 ScafM SNP 0008.scaffold00029 1378502 1 T A scaffold1870 Both SNP 0008.scaffold00029 1378784 1 A G scaffold1870 Both SNP 0008.scaffold00029 1378935 1 A T scaffold1870 Both SNP 0008.scaffold00029 1379336 1 A C scaffold1870 ReadM SNP 0008.scaffold00029 1379778 1 G T - ReadM INDEL 0008.scaffold00029 1379860 1 A . - ReadM SNP 0008.scaffold00029 1379990 1 C G - ReadM SNP 0008.scaffold00029 1380724 1 A C - ReadM SNP 0008.scaffold00029 1380873 1 G C - ReadM SNP 0008.scaffold00029 1381267 1 G A - ReadM SNP 0008.scaffold00029 1381462 1 A G - ReadM SNP 0008.scaffold00029 1381817 1 G A - ReadM SNP 0008.scaffold00029 1381989 1 A C - ReadM SNP 0008.scaffold00029 1382281 1 T C - ReadM SNP 0008.scaffold00029 1382622 1 C G - Both SNP 0008.scaffold00029 1383226 1 G C scaffold1870 Both SNP 0008.scaffold00029 1383575 1 T C scaffold1870 Both SNP 0008.scaffold00029 1383659 1 A C scaffold1870 ScafM SNP 0008.scaffold00029 1383742 1 T C scaffold1870 Both SNP 0008.scaffold00029 1383756 1 C T scaffold1870 Both SNP 0008.scaffold00029 1383794 1 T A scaffold1870 Both SNP 0008.scaffold00029 1383971 1 A G scaffold1870 ScafM SNP 0008.scaffold00029 1384191 1 A T scaffold1870 ScafM SNP 0008.scaffold00029 1384215 1 A G scaffold1870 ScafM SNP 0008.scaffold00029 1384255 1 T A scaffold1870 ScafM INDEL 0008.scaffold00029 1384376 20 .................... ACTTAAAGCAACTGAAGGTT scaffold1870 ScafM INDEL 0008.scaffold00029 1384403 1 . T scaffold1870 ScafM INDEL 0008.scaffold00029 1384437 10 .......... GGTTAACCAT scaffold1870 ReadM SNP 0008.scaffold00029 1384557 1 T C - ReadM SNP 0008.scaffold00029 1384583 1 A G - Both SNP 0008.scaffold00029 1384728 1 C T scaffold1870 ReadM SNP 0008.scaffold00029 1384914 1 T C - ReadM INDEL 0008.scaffold00029 1385067 1 . C - ReadM SNP 0008.scaffold00029 1385392 1 G T - ReadM SNP 0008.scaffold00029 1385451 1 G A - ReadM SNP 0008.scaffold00029 1385454 1 C T - ReadM SNP 0008.scaffold00029 1385512 1 G A - ScafM INDEL 0008.scaffold00029 1385802 1 T . scaffold1870 ScafM SNP 0008.scaffold00029 1385876 1 C T scaffold1870 ScafM INDEL 0008.scaffold00029 1385992 1 T . scaffold1870 ScafM SNP 0008.scaffold00029 1386018 1 G T scaffold1870 ScafM SNP 0008.scaffold00029 1386151 1 A T scaffold1870 ScafM INDEL 0008.scaffold00029 1386320 1 . A scaffold1870 ScafM SNP 0008.scaffold00029 1386642 1 A G scaffold39230 ScafM SNP 0008.scaffold00029 1386730 1 A G scaffold39230 ScafM SNP 0008.scaffold00029 1386820 1 A G scaffold39230 Both SNP 0008.scaffold00029 1386892 1 C G scaffold39230 Both SNP 0008.scaffold00029 1387037 1 A C scaffold39230 Both SNP 0008.scaffold00029 1387040 1 A C scaffold39230 ScafM SNP 0008.scaffold00029 1387157 1 T G scaffold39230 ScafM SNP 0008.scaffold00029 1387161 1 T C scaffold39230 ScafM SNP 0008.scaffold00029 1387249 1 C A scaffold39230 ScafM SNP 0008.scaffold00029 1387264 1 G C scaffold39230 ScafM SNP 0008.scaffold00029 1387375 1 A G scaffold39230 ScafM SNP 0008.scaffold00029 1387397 1 A G scaffold39230 ScafM INDEL 0008.scaffold00029 1387439 8 TCATCTAT ........ scaffold39230 ScafM SNP 0008.scaffold00029 1387456 1 A C scaffold39230 ReadM SNP 0008.scaffold00029 1390167 1 C G - ReadM SNP 0008.scaffold00029 1390205 1 G A - ReadM SNP 0008.scaffold00029 1390349 1 A C - ReadM SNP 0008.scaffold00029 1390362 1 G T - Both SNP 0008.scaffold00029 1390409 1 A T scaffold1000 Both SNP 0008.scaffold00029 1390519 1 A G scaffold1000 ReadM SNP 0008.scaffold00029 1390551 1 A G - ScafM SNP 0008.scaffold00029 1390819 1 C G scaffold1000 ScafM SNP 0008.scaffold00029 1393152 1 T C scaffold1000 ScafM SNP 0008.scaffold00029 1393359 1 C A scaffold1000 ScafM SNP 0008.scaffold00029 1393445 1 T G scaffold1000 ScafM SNP 0008.scaffold00029 1393538 1 A T scaffold1000 ScafM SNP 0008.scaffold00029 1393588 2 TG CT scaffold1000 ReadM SNP 0008.scaffold00029 1395676 1 G A - ReadM SNP 0008.scaffold00029 1395685 1 T C - ReadM SNP 0008.scaffold00029 1395709 1 G A - ReadM SNP 0008.scaffold00029 1395853 1 G C - ReadM SNP 0008.scaffold00029 1396222 1 G A - ScafM SNP 0008.scaffold00029 1396486 1 G T scaffold1000 ScafM SNP 0008.scaffold00029 1396602 1 A G scaffold1000 ScafM SNP 0008.scaffold00029 1396622 1 G A scaffold1000 ScafM INDEL 0008.scaffold00029 1397961 7 ....... AAGTGTC scaffold1000 ScafM SNP 0008.scaffold00029 1397986 1 T C scaffold1000 ScafM SNP 0008.scaffold00029 1398040 1 A C scaffold1000 ReadM SNP 0008.scaffold00029 1402898 1 C T - ReadM SNP 0008.scaffold00029 1403586 2 GG AA - Both SNP 0008.scaffold00029 1403648 1 T A scaffold1000 ScafM SNP 0008.scaffold00029 1403973 1 C A scaffold1000 ScafM SNP 0008.scaffold00029 1404007 1 T C scaffold1000 Both SNP 0008.scaffold00029 1404020 1 G A scaffold1000 Both SNP 0008.scaffold00029 1404048 1 G A scaffold1000 Both SNP 0008.scaffold00029 1404297 1 T C scaffold1000 Both SNP 0008.scaffold00029 1404336 1 A G scaffold1000 Both SNP 0008.scaffold00029 1404399 1 T A scaffold1000 Both SNP 0008.scaffold00029 1404483 1 A G scaffold1000 ScafM SNP 0008.scaffold00029 1404534 2 GA AT scaffold1000 ScafM SNP 0008.scaffold00029 1404540 1 A C scaffold1000 Both SNP 0008.scaffold00029 1404566 1 G A scaffold1000 Both SNP 0008.scaffold00029 1404702 1 G C scaffold1000 Both INDEL 0008.scaffold00029 1404901 1 . G scaffold1000 ScafM SNP 0008.scaffold00029 1404954 2 GA TC scaffold1000 ScafM SNP 0008.scaffold00029 1404967 1 C G scaffold1000 Both SNP 0008.scaffold00029 1404992 1 A T scaffold1000 Both SNP 0008.scaffold00029 1405028 1 C T scaffold1000 Both SNP 0008.scaffold00029 1405098 1 G A scaffold1000 ReadM SNP 0008.scaffold00029 1405183 1 G A - ReadM SNP 0008.scaffold00029 1405186 1 C T - Both SNP 0008.scaffold00029 1405232 1 A C scaffold1000 Both SNP 0008.scaffold00029 1405414 1 A G scaffold1000 ReadM SNP 0008.scaffold00029 1405552 1 G A - Both SNP 0008.scaffold00029 1405636 1 T C scaffold1000 Both SNP 0008.scaffold00029 1405731 1 T C scaffold1000 Both SNP 0008.scaffold00029 1405755 1 A G scaffold1000 Both SNP 0008.scaffold00029 1405772 1 T G scaffold1000 Both INDEL 0008.scaffold00029 1405776 1 A . scaffold1000 ScafM INDEL 0008.scaffold00029 1406057 4 .... 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T - ReadM SNP 0008.scaffold00029 1412709 1 C A - ReadM SNP 0008.scaffold00029 1412852 1 T G - ReadM INDEL 0008.scaffold00029 1412863 1 . T - ReadM SNP 0008.scaffold00029 1413061 1 G C - ReadM SNP 0008.scaffold00029 1413087 1 C T - ReadM SNP 0008.scaffold00029 1413196 1 A G - ReadM INDEL 0008.scaffold00029 1413268 1 . C - ReadM INDEL 0008.scaffold00029 1413270 1 . A - Both SNP 0008.scaffold00029 1413470 1 A G scaffold1000 Both SNP 0008.scaffold00029 1413742 1 T C scaffold1000 ReadM SNP 0008.scaffold00029 1413803 1 A G - ReadM SNP 0008.scaffold00029 1415197 1 A G - ReadM INDEL 0008.scaffold00029 1415325 1 T . - ReadM SNP 0008.scaffold00029 1415509 1 A G - ReadM SNP 0008.scaffold00029 1415522 1 A G - ReadM SNP 0008.scaffold00029 1415613 1 G T - ReadM SNP 0008.scaffold00029 1415769 1 C G - ReadM SNP 0008.scaffold00029 1415786 1 T C - ReadM SNP 0008.scaffold00029 1415810 1 G C - ReadM SNP 0008.scaffold00029 1415937 1 A C - ReadM SNP 0008.scaffold00029 1416131 1 A G - ReadM SNP 0008.scaffold00029 1416149 1 T C - ReadM SNP 0008.scaffold00029 1416681 1 C G - ReadM SNP 0008.scaffold00029 1416845 1 T A - ReadM SNP 0008.scaffold00029 1416904 1 C A - ReadM SNP 0008.scaffold00029 1416936 1 T C - ReadM SNP 0008.scaffold00029 1417127 1 T C - ReadM SNP 0008.scaffold00029 1417546 1 A G - ReadM SNP 0008.scaffold00029 1417589 1 T C - ReadM SNP 0008.scaffold00029 1417656 1 A G - ReadM SNP 0008.scaffold00029 1417922 1 A G - ReadM SNP 0008.scaffold00029 1418150 1 A G - ReadM SNP 0008.scaffold00029 1418210 1 A G - ReadM SNP 0008.scaffold00029 1418315 1 C A - ReadM SNP 0008.scaffold00029 1418708 1 T C - ReadM SNP 0008.scaffold00029 1418838 1 C T - Both SNP 0008.scaffold00029 1419228 1 C T scaffold1000 Both SNP 0008.scaffold00029 1419238 1 C A scaffold1000 Both SNP 0008.scaffold00029 1419427 1 A G scaffold1000 Both SNP 0008.scaffold00029 1419446 1 A G scaffold1000 ScafM SNP 0008.scaffold00029 1419516 1 T G scaffold1000 ScafM SNP 0008.scaffold00029 1419566 1 A C scaffold1000 ScafM SNP 0008.scaffold00029 1419582 1 A G scaffold1000 ScafM SNP 0008.scaffold00029 1419615 1 A G scaffold1000 ScafM SNP 0009.scaffold00036 5016 1 C T scaffold21728 ScafM INDEL 0009.scaffold00036 17701 4 CTAG .... scaffold21728 ScafM INDEL 0009.scaffold00036 17707 4 TCCC .... scaffold21728 ScafM INDEL 0009.scaffold00036 17713 10 AGAACAAGCA .......... scaffold21728 ScafM SNP 0009.scaffold00036 50381 1 T G scaffold7679 ScafM INDEL 0009.scaffold00036 50397 1 . T scaffold7679 ScafM INDEL 0009.scaffold00036 50518 1 G . scaffold7679 ScafM SNP 0009.scaffold00036 50555 1 G A scaffold7679 ScafM SNP 0009.scaffold00036 50563 1 G A scaffold7679 ScafM SNP 0009.scaffold00036 50626 1 C G scaffold7679 ScafM SNP 0009.scaffold00036 50747 1 A G scaffold7679 ScafM SNP 0009.scaffold00036 50804 1 T A scaffold7679 ScafM SNP 0009.scaffold00036 50807 1 T A scaffold7679 ScafM SNP 0009.scaffold00036 69184 1 A G scaffold41065 ScafM SNP 0009.scaffold00036 69219 1 A G scaffold41065 ScafM SNP 0009.scaffold00036 69235 1 C T scaffold41065 ScafM SNP 0009.scaffold00036 69260 1 C T scaffold41065 ScafM SNP 0009.scaffold00036 69273 1 C A scaffold41065 ScafM SNP 0009.scaffold00036 69454 1 T C scaffold3901 ScafM SNP 0009.scaffold00036 77615 1 T A scaffold10947 ScafM SNP 0009.scaffold00036 77707 1 C T scaffold10947 ScafM SNP 0009.scaffold00036 77721 1 A T scaffold10947 ScafM SNP 0009.scaffold00036 77785 1 A T scaffold10947 ScafM INDEL 0009.scaffold00036 77984 4 .... GATT scaffold10947 ScafM SNP 0009.scaffold00036 78003 3 TGT CAC scaffold10947 ScafM SNP 0009.scaffold00036 78028 2 TT AC scaffold10947 ScafM INDEL 0009.scaffold00036 78386 2 TA .. scaffold30620 ScafM INDEL 0009.scaffold00036 78470 4 ACGT .... scaffold30620 ScafM SNP 0009.scaffold00036 78681 1 C T scaffold30620 ScafM SNP 0009.scaffold00036 79539 1 A T scaffold8690 ScafM SNP 0009.scaffold00036 85196 2 CA AC scaffold8690 ScafM INDEL 0009.scaffold00036 86759 1 T . scaffold8690 ScafM INDEL 0009.scaffold00036 107067 1 . T scaffold8690 Both INDEL 0009.scaffold00036 123289 1 . A scaffold31538 ScafM INDEL 0009.scaffold00036 123390 1 . A scaffold31538 Both SNP 0009.scaffold00036 125380 1 A G scaffold31538 ScafM INDEL 0009.scaffold00036 128834 8 ........ CATATATC scaffold31538 ScafM SNP 0009.scaffold00036 138903 2 TC GT scaffold1686 ScafM SNP 0009.scaffold00036 138917 1 C T scaffold1686 ScafM INDEL 0009.scaffold00036 138918 1 . C scaffold1686 ScafM SNP 0009.scaffold00036 138921 1 A G scaffold1686 ScafM SNP 0009.scaffold00036 138941 1 T C scaffold1686 ScafM SNP 0009.scaffold00036 138943 1 T G scaffold1686 ScafM SNP 0009.scaffold00036 138945 1 G T scaffold1686 ScafM SNP 0009.scaffold00036 138948 2 GC AT scaffold1686 ScafM INDEL 0009.scaffold00036 138957 1 . G scaffold1686 ScafM INDEL 0009.scaffold00036 138960 1 . T scaffold1686 ScafM INDEL 0009.scaffold00036 138964 1 G . scaffold1686 ScafM SNP 0009.scaffold00036 138966 1 C T scaffold1686 ScafM INDEL 0009.scaffold00036 138969 2 AT .C scaffold1686 ScafM SNP 0009.scaffold00036 138975 1 A G scaffold1686 ScafM SNP 0009.scaffold00036 138985 1 A G scaffold1686 ScafM SNP 0009.scaffold00036 139000 1 G A scaffold1686 ScafM SNP 0009.scaffold00036 139007 2 GC AA scaffold1686 ScafM SNP 0009.scaffold00036 139060 1 C T scaffold1686 ScafM SNP 0009.scaffold00036 139070 1 A G scaffold1686 ScafM SNP 0009.scaffold00036 139081 1 T G scaffold1686 ScafM SNP 0009.scaffold00036 139091 2 TC CT scaffold1686 ScafM SNP 0009.scaffold00036 139098 1 A C scaffold1686 ScafM SNP 0009.scaffold00036 139104 1 A C scaffold1686 ScafM SNP 0009.scaffold00036 139109 2 TG CA scaffold1686 ScafM SNP 0009.scaffold00036 139117 1 G T scaffold1686 ScafM SNP 0009.scaffold00036 139423 1 A T scaffold9965 ScafM INDEL 0009.scaffold00036 139459 1 G . scaffold9965 ScafM INDEL 0009.scaffold00036 139466 3 TTT ..G scaffold9965 ScafM SNP 0009.scaffold00036 139509 1 C T scaffold9965 ScafM SNP 0009.scaffold00036 139556 1 A G scaffold9965 ScafM SNP 0009.scaffold00036 139590 1 T G scaffold9965 ScafM SNP 0009.scaffold00036 139601 1 T G scaffold9965 ScafM SNP 0009.scaffold00036 139605 1 G A scaffold9965 ScafM SNP 0009.scaffold00036 139643 1 G A scaffold9965 Both INDEL 0009.scaffold00036 139945 2 .. TT scaffold9965 ReadM SNP 0009.scaffold00036 154348 1 T G - ReadM SNP 0009.scaffold00036 154382 1 A G - ReadM SNP 0009.scaffold00036 154384 1 C T - ReadM SNP 0009.scaffold00036 154414 1 C G - ScafM INDEL 0009.scaffold00036 164901 1 A . scaffold9965 ScafM INDEL 0009.scaffold00036 164907 3 CGA ... scaffold9965 ScafM SNP 0009.scaffold00036 170335 1 A G scaffold6727 ScafM SNP 0009.scaffold00036 170341 1 T C scaffold6727 ScafM SNP 0009.scaffold00036 170348 1 G A scaffold6727 ScafM INDEL 0009.scaffold00036 170419 2 AC .. scaffold6727 ScafM INDEL 0009.scaffold00036 170442 1 A . scaffold6727 ScafM SNP 0009.scaffold00036 170460 1 C T scaffold6727 ScafM INDEL 0009.scaffold00036 170472 1 . G scaffold6727 ScafM SNP 0009.scaffold00036 170479 1 C T scaffold6727 ScafM INDEL 0009.scaffold00036 175053 54 ...................................................... TTAAGAGAAAAGACACACGAATTTTTACAAGGAAAACTTCCTAGGCCCAATAGG scaffold12409 ScafM INDEL 0009.scaffold00036 178116 4 TTTG .... scaffold12409 ScafM INDEL 0009.scaffold00036 184206 1 T . scaffold12409 ScafM INDEL 0009.scaffold00036 184211 1 . T scaffold12409 ScafM INDEL 0009.scaffold00036 185163 2 .. GA scaffold12409 ScafM INDEL 0009.scaffold00036 185279 1 . T scaffold12409 ScafM SNP 0009.scaffold00036 225043 1 A C scaffold22321 ScafM SNP 0009.scaffold00036 225080 1 G T scaffold22321 ScafM SNP 0009.scaffold00036 225107 1 C T scaffold22321 ScafM SNP 0009.scaffold00036 225117 1 G T scaffold22321 ScafM INDEL 0009.scaffold00036 261856 1 . T scaffold7363 ScafM SNP 0009.scaffold00036 263933 1 T G scaffold7363 ScafM INDEL 0009.scaffold00036 272899 9 TCACTCTTT ......... scaffold7363 ScafM SNP 0009.scaffold00036 272912 1 T C scaffold7363 ScafM INDEL 0009.scaffold00036 291147 1 . T scaffold4223 Both SNP 0009.scaffold00036 295006 1 T G scaffold4223 ScafM SNP 0009.scaffold00036 308758 1 G A scaffold4223 ScafM INDEL 0009.scaffold00036 313212 34 TAAAGTCTTCAACTGTCTAGTCAATCACGACAAC .................................. scaffold4223 ReadM INDEL 0009.scaffold00036 319187 1 T . - ScafM SNP 0009.scaffold00036 319915 1 A G scaffold4223 ScafM SNP 0009.scaffold00036 319917 1 G A scaffold4223 ScafM INDEL 0009.scaffold00036 324380 1 . T scaffold4223 ScafM SNP 0009.scaffold00036 373681 1 A C scaffold4223 ScafM SNP 0009.scaffold00036 375012 1 T C scaffold4223 ScafM SNP 0009.scaffold00036 375760 1 A C scaffold4223 ScafM SNP 0009.scaffold00036 375774 1 T C scaffold4223 ScafM SNP 0009.scaffold00036 375786 1 G A scaffold4223 ScafM SNP 0009.scaffold00036 375981 1 T A scaffold4223 ScafM INDEL 0009.scaffold00036 393918 1 . G scaffold4223 ScafM INDEL 0009.scaffold00036 393947 1 . G scaffold4223 ScafM INDEL 0009.scaffold00036 418356 1 . A scaffold7683 ReadM SNP 0009.scaffold00036 431736 1 C G - ReadM INDEL 0009.scaffold00036 432272 1 . T - ScafM INDEL 0009.scaffold00036 461442 14 TTGAATGGGTCCGA .............. scaffold7683 ScafM INDEL 0009.scaffold00036 461459 3 ACA ... scaffold7683 ScafM INDEL 0009.scaffold00036 462479 1 . T scaffold7683 ScafM SNP 0009.scaffold00036 476682 1 G A scaffold2688 Both SNP 0009.scaffold00036 476719 1 A G scaffold2688 Both SNP 0009.scaffold00036 476734 1 A T scaffold2688 Both SNP 0009.scaffold00036 476776 1 G A scaffold2688 ScafM SNP 0009.scaffold00036 502183 3 CCT AAA scaffold2688 ScafM INDEL 0009.scaffold00036 502186 4 .... AACC scaffold2688 ScafM INDEL 0009.scaffold00036 502520 2 .. CC scaffold2688 ScafM INDEL 0009.scaffold00036 508065 1 . A scaffold2688 ScafM SNP 0009.scaffold00036 523028 1 A C scaffold2688 ScafM INDEL 0009.scaffold00036 525079 2 TA .. scaffold2688 ScafM SNP 0009.scaffold00036 539923 1 G T scaffold2688 ScafM SNP 0009.scaffold00036 548258 1 T C scaffold2688 ScafM INDEL 0009.scaffold00036 581306 2 TC .. scaffold2688 ScafM INDEL 0009.scaffold00036 581312 5 AGAAC ..... scaffold2688 ScafM INDEL 0009.scaffold00036 596344 1 . G scaffold2688 ScafM SNP 0009.scaffold00036 606968 1 T C scaffold2688 ScafM SNP 0009.scaffold00036 607124 1 T C scaffold2688 ScafM SNP 0009.scaffold00036 607229 1 G A scaffold2688 ScafM SNP 0009.scaffold00036 607234 1 T C scaffold2688 ScafM SNP 0009.scaffold00036 607320 1 A T scaffold2688 ScafM SNP 0009.scaffold00036 607499 1 A G scaffold2688 ScafM SNP 0009.scaffold00036 607584 1 T A scaffold2688 ScafM SNP 0009.scaffold00036 610888 1 A G scaffold2688 ScafM INDEL 0009.scaffold00036 623362 1 . A scaffold2688 ScafM INDEL 0009.scaffold00036 639036 21 ..................... AGTGGCGGTTCCAACACCCAA scaffold11636 ScafM SNP 0009.scaffold00036 639073 1 A C scaffold11636 ScafM SNP 0009.scaffold00036 639078 1 C A scaffold11636 ScafM SNP 0009.scaffold00036 648319 1 A C scaffold9303 ScafM INDEL 0009.scaffold00036 648404 2 CT .. scaffold9303 ScafM SNP 0009.scaffold00036 648407 1 C G scaffold9303 ScafM INDEL 0009.scaffold00036 648412 2 .. TA scaffold9303 ScafM SNP 0009.scaffold00036 648415 1 C T scaffold9303 ScafM SNP 0009.scaffold00036 648448 1 C T scaffold9303 ScafM SNP 0009.scaffold00036 648467 1 C T scaffold9303 ScafM SNP 0009.scaffold00036 648478 1 C T scaffold9303 ScafM SNP 0009.scaffold00036 676759 1 T A scaffold12518 ScafM SNP 0009.scaffold00036 677856 1 C T scaffold12518 ScafM SNP 0009.scaffold00036 692896 4 GGGA TAAT scaffold12518 ScafM SNP 0009.scaffold00036 692901 3 GGG ACT scaffold12518 ScafM INDEL 0009.scaffold00036 698419 1 C . scaffold12518 ScafM SNP 0010.scaffold00043 697 1 G A scaffold90 ReadM SNP 0010.scaffold00043 766 1 A G - Both SNP 0010.scaffold00043 1124 1 G C scaffold90 ScafM SNP 0010.scaffold00043 1217 1 T C scaffold90 ReadM SNP 0010.scaffold00043 1570 1 T C - Both SNP 0010.scaffold00043 1643 1 T A scaffold90 Both SNP 0010.scaffold00043 1889 1 G A scaffold90 Both SNP 0010.scaffold00043 2121 1 A C scaffold90 Both SNP 0010.scaffold00043 2288 1 A G scaffold90 Both SNP 0010.scaffold00043 2307 1 C T scaffold90 Both SNP 0010.scaffold00043 2345 1 C T scaffold90 Both SNP 0010.scaffold00043 2362 1 T G scaffold90 Both SNP 0010.scaffold00043 2392 1 A G scaffold90 Both SNP 0010.scaffold00043 2470 1 A G scaffold90 Both SNP 0010.scaffold00043 2578 1 C T scaffold90 Both SNP 0010.scaffold00043 2998 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 3221 5 ..... AATTT scaffold90 ScafM SNP 0010.scaffold00043 3382 1 C T scaffold90 ScafM SNP 0010.scaffold00043 3385 1 G T scaffold90 ScafM SNP 0010.scaffold00043 3397 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 3635 1 A . scaffold90 ScafM SNP 0010.scaffold00043 3646 1 C T scaffold90 ScafM SNP 0010.scaffold00043 3674 1 G A scaffold90 ScafM SNP 0010.scaffold00043 3676 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 3695 9 ACGCAGAAA ......... scaffold90 ScafM SNP 0010.scaffold00043 3711 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 3723 6 ATCATA ...... scaffold90 ScafM INDEL 0010.scaffold00043 3731 1 T . scaffold90 ScafM INDEL 0010.scaffold00043 3734 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 3736 2 AA .. scaffold90 ScafM INDEL 0010.scaffold00043 3900 8 ........ TCATACTA scaffold90 ScafM SNP 0010.scaffold00043 3909 1 A G scaffold90 ScafM SNP 0010.scaffold00043 3944 1 C T scaffold90 ScafM SNP 0010.scaffold00043 3950 1 C T scaffold90 ScafM SNP 0010.scaffold00043 3957 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 3979 20 TGCCACAGTTTTCCCACGCC .................... scaffold90 ScafM SNP 0010.scaffold00043 4005 1 T C scaffold90 ScafM SNP 0010.scaffold00043 4014 1 G A scaffold90 ScafM SNP 0010.scaffold00043 4023 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 4396 1 . A scaffold90 ScafM SNP 0010.scaffold00043 4448 1 G A scaffold90 ScafM SNP 0010.scaffold00043 4528 1 A T scaffold90 ScafM SNP 0010.scaffold00043 4630 1 A C scaffold90 ScafM SNP 0010.scaffold00043 4754 1 C T scaffold90 ScafM SNP 0010.scaffold00043 4764 1 A T scaffold90 Both SNP 0010.scaffold00043 4817 1 A C scaffold90 Both SNP 0010.scaffold00043 4951 1 T C scaffold90 Both INDEL 0010.scaffold00043 5140 1 . T scaffold90 Both SNP 0010.scaffold00043 5164 1 G A scaffold90 Both SNP 0010.scaffold00043 5251 1 A G scaffold90 ScafM SNP 0010.scaffold00043 5291 1 G C scaffold90 ScafM SNP 0010.scaffold00043 5295 1 C T scaffold90 ScafM SNP 0010.scaffold00043 5298 1 A C scaffold90 ReadM SNP 0010.scaffold00043 5320 1 T C - ReadM SNP 0010.scaffold00043 5326 1 A C - ReadM SNP 0010.scaffold00043 5401 1 T C - ReadM SNP 0010.scaffold00043 5414 1 A G - ReadM SNP 0010.scaffold00043 5584 1 G A - ReadM SNP 0010.scaffold00043 5617 1 G T - ReadM SNP 0010.scaffold00043 5843 1 C G - Both INDEL 0010.scaffold00043 5885 1 . C scaffold90 ReadM SNP 0010.scaffold00043 6032 1 G A - ReadM INDEL 0010.scaffold00043 6038 1 . G - ReadM SNP 0010.scaffold00043 6108 1 A T - ReadM SNP 0010.scaffold00043 6458 1 A G - Both INDEL 0010.scaffold00043 6477 1 G . scaffold90 ScafM SNP 0010.scaffold00043 6480 1 G A scaffold90 ReadM SNP 0010.scaffold00043 6557 1 T C - ScafM SNP 0010.scaffold00043 6840 1 A G scaffold90 Both SNP 0010.scaffold00043 6961 1 T G scaffold90 Both SNP 0010.scaffold00043 7129 1 T C scaffold90 Both SNP 0010.scaffold00043 7153 1 T C scaffold90 ReadM SNP 0010.scaffold00043 7320 1 A G - ReadM SNP 0010.scaffold00043 7356 1 A G - ReadM SNP 0010.scaffold00043 7427 1 T C - ReadM INDEL 0010.scaffold00043 7467 1 T . - ReadM INDEL 0010.scaffold00043 7513 1 T . - Both SNP 0010.scaffold00043 7594 1 C T scaffold90 Both INDEL 0010.scaffold00043 7666 2 TA .. scaffold90 ScafM INDEL 0010.scaffold00043 7692 15 ............... ACAATTAGATTTCTA scaffold90 ScafM SNP 0010.scaffold00043 7699 1 A T scaffold90 ReadM INDEL 0010.scaffold00043 7874 1 . A - ReadM SNP 0010.scaffold00043 8031 1 G A - ReadM SNP 0010.scaffold00043 8210 1 G T - ReadM SNP 0010.scaffold00043 8459 1 C T - ReadM SNP 0010.scaffold00043 8522 1 A G - ReadM SNP 0010.scaffold00043 8643 1 A G - ReadM INDEL 0010.scaffold00043 8762 2 .. CG - ReadM SNP 0010.scaffold00043 8926 1 G A - ReadM SNP 0010.scaffold00043 9094 1 A G - ScafM SNP 0010.scaffold00043 9924 1 T C scaffold90 Both SNP 0010.scaffold00043 9934 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 10211 6 ATTTTC ...... scaffold90 ScafM INDEL 0010.scaffold00043 10218 2 GC .. scaffold90 ReadM SNP 0010.scaffold00043 10340 1 C T - ReadM SNP 0010.scaffold00043 10419 1 C T - ReadM SNP 0010.scaffold00043 10432 1 G A - Both SNP 0010.scaffold00043 10530 1 A G scaffold90 Both INDEL 0010.scaffold00043 10542 1 . G scaffold90 ScafM SNP 0010.scaffold00043 10560 1 C T scaffold90 ScafM SNP 0010.scaffold00043 10572 1 A C scaffold90 ScafM SNP 0010.scaffold00043 10581 1 G A scaffold90 ScafM SNP 0010.scaffold00043 10606 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 10625 7 ....... AATATGA scaffold90 ScafM SNP 0010.scaffold00043 10637 1 T A scaffold90 Both SNP 0010.scaffold00043 10689 1 A T scaffold90 ScafM SNP 0010.scaffold00043 10745 2 CC TT scaffold90 ScafM SNP 0010.scaffold00043 10749 1 A C scaffold90 ScafM SNP 0010.scaffold00043 10759 1 T C scaffold90 ScafM SNP 0010.scaffold00043 10761 1 A G scaffold90 ScafM SNP 0010.scaffold00043 10774 1 C T scaffold90 ScafM SNP 0010.scaffold00043 10781 1 T C scaffold90 ScafM SNP 0010.scaffold00043 10805 1 T A scaffold90 ScafM SNP 0010.scaffold00043 10816 1 T A scaffold90 ScafM SNP 0010.scaffold00043 10821 2 AT TA scaffold90 ScafM SNP 0010.scaffold00043 10850 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11201 1 T C scaffold90 ScafM SNP 0010.scaffold00043 11642 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11645 1 G T scaffold90 ScafM SNP 0010.scaffold00043 11659 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11664 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 11689 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 11690 1 C A scaffold90 ScafM SNP 0010.scaffold00043 11701 1 A G scaffold90 ScafM SNP 0010.scaffold00043 11703 2 CG TT scaffold90 ScafM SNP 0010.scaffold00043 11708 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11726 1 G C scaffold90 ScafM SNP 0010.scaffold00043 11748 1 T C scaffold90 ScafM SNP 0010.scaffold00043 11764 1 T A scaffold90 ScafM SNP 0010.scaffold00043 11777 1 A G scaffold90 ScafM SNP 0010.scaffold00043 11780 1 C T scaffold90 ScafM SNP 0010.scaffold00043 11785 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 11787 1 . C scaffold90 ScafM SNP 0010.scaffold00043 11791 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11804 1 T G scaffold90 ScafM SNP 0010.scaffold00043 11821 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 11825 12 ............ TTATAAAAGGTA scaffold90 ScafM SNP 0010.scaffold00043 11842 1 T C scaffold90 ScafM SNP 0010.scaffold00043 11847 1 T C scaffold90 ScafM SNP 0010.scaffold00043 11859 1 C T scaffold90 ScafM SNP 0010.scaffold00043 11879 1 G A scaffold90 ScafM SNP 0010.scaffold00043 11908 1 G C scaffold90 ScafM SNP 0010.scaffold00043 11916 1 C T scaffold90 ScafM SNP 0010.scaffold00043 11920 2 AT GA scaffold90 ScafM SNP 0010.scaffold00043 11923 1 T C scaffold90 ScafM SNP 0010.scaffold00043 13110 1 T C scaffold90 ScafM SNP 0010.scaffold00043 13134 1 T C scaffold90 ScafM SNP 0010.scaffold00043 13136 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 13155 12 ............ ATAGAAATACCC scaffold90 ScafM INDEL 0010.scaffold00043 13156 16 ................ CAAAAAAAAAAAAAAC scaffold90 ScafM SNP 0010.scaffold00043 13162 1 T A scaffold90 ScafM SNP 0010.scaffold00043 13237 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 13247 8 TCAGCAAG ........ scaffold90 ScafM SNP 0010.scaffold00043 13289 1 T A scaffold90 ReadM SNP 0010.scaffold00043 13518 1 C A - ReadM SNP 0010.scaffold00043 13535 1 C T - ReadM SNP 0010.scaffold00043 13599 1 G T - ScafM INDEL 0010.scaffold00043 13670 7 AGTTAAA ....... scaffold90 ReadM SNP 0010.scaffold00043 15018 1 G T - ReadM SNP 0010.scaffold00043 16596 1 G A - Both SNP 0010.scaffold00043 17362 1 G C scaffold90 ScafM SNP 0010.scaffold00043 17389 2 GT AC scaffold90 Both SNP 0010.scaffold00043 18117 1 G A scaffold90 ScafM SNP 0010.scaffold00043 18127 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 18132 7 ....... CATAAGC scaffold90 ScafM SNP 0010.scaffold00043 18143 1 T A scaffold90 ScafM SNP 0010.scaffold00043 18161 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 18196 3 TCT ... scaffold90 ScafM INDEL 0010.scaffold00043 18200 2 GA .T scaffold90 ScafM SNP 0010.scaffold00043 18219 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 18234 3 CTA ... scaffold90 ScafM INDEL 0010.scaffold00043 18246 4 TACA .... scaffold90 Both SNP 0010.scaffold00043 18262 1 G A scaffold90 Both SNP 0010.scaffold00043 18977 1 A C scaffold90 Both SNP 0010.scaffold00043 19023 1 C T scaffold90 Both SNP 0010.scaffold00043 19142 1 C T scaffold90 Both SNP 0010.scaffold00043 19288 1 A T scaffold90 Both SNP 0010.scaffold00043 19331 1 T C scaffold90 Both SNP 0010.scaffold00043 19942 1 T C scaffold90 Both SNP 0010.scaffold00043 19948 1 A G scaffold90 Both SNP 0010.scaffold00043 20064 1 C T scaffold90 Both SNP 0010.scaffold00043 20121 1 T C scaffold90 Both SNP 0010.scaffold00043 20224 1 T G scaffold90 Both SNP 0010.scaffold00043 20269 1 A T scaffold90 Both SNP 0010.scaffold00043 20310 1 T A scaffold90 ReadM SNP 0010.scaffold00043 20329 1 A G - ScafM SNP 0010.scaffold00043 20735 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 20744 2 .. GT scaffold90 ReadM SNP 0010.scaffold00043 20927 1 C T - ReadM SNP 0010.scaffold00043 20981 1 C T - ReadM SNP 0010.scaffold00043 21072 1 C A - Both INDEL 0010.scaffold00043 21160 2 .. AA scaffold90 ScafM INDEL 0010.scaffold00043 21247 7 ....... ACAGTTT scaffold90 Both SNP 0010.scaffold00043 21578 1 C T scaffold90 Both SNP 0010.scaffold00043 21593 1 G A scaffold90 Both SNP 0010.scaffold00043 21746 1 A G scaffold90 ScafM SNP 0010.scaffold00043 21998 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 22737 4 GCGT .... scaffold90 ScafM SNP 0010.scaffold00043 22775 1 G A scaffold90 Both SNP 0010.scaffold00043 23110 1 G A scaffold90 Both SNP 0010.scaffold00043 23146 1 T G scaffold90 Both INDEL 0010.scaffold00043 23179 1 A . scaffold90 ScafM SNP 0010.scaffold00043 23196 1 A G scaffold90 ScafM SNP 0010.scaffold00043 23201 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 23223 8 AGCCTTTT ........ scaffold90 Both SNP 0010.scaffold00043 23256 1 C T scaffold90 ScafM SNP 0010.scaffold00043 23321 1 A T scaffold90 ScafM SNP 0010.scaffold00043 23325 1 C A scaffold90 Both SNP 0010.scaffold00043 23356 1 C T scaffold90 Both SNP 0010.scaffold00043 23401 1 C T scaffold90 Both SNP 0010.scaffold00043 23497 1 A G scaffold90 Both SNP 0010.scaffold00043 23734 1 C T scaffold90 Both SNP 0010.scaffold00043 23788 1 T C scaffold90 Both SNP 0010.scaffold00043 23800 1 A C scaffold90 Both SNP 0010.scaffold00043 23842 1 C T scaffold90 Both SNP 0010.scaffold00043 24139 1 C T scaffold90 ScafM SNP 0010.scaffold00043 24253 1 C A scaffold90 Both SNP 0010.scaffold00043 24286 1 A G scaffold90 Both SNP 0010.scaffold00043 24343 1 A G scaffold90 Both SNP 0010.scaffold00043 24402 1 G A scaffold90 Both SNP 0010.scaffold00043 24505 1 A G scaffold90 Both SNP 0010.scaffold00043 24541 1 G A scaffold90 Both SNP 0010.scaffold00043 24595 1 C A scaffold90 Both SNP 0010.scaffold00043 24759 1 T G scaffold90 Both SNP 0010.scaffold00043 25080 1 G A scaffold90 Both SNP 0010.scaffold00043 25218 1 A G scaffold90 ScafM SNP 0010.scaffold00043 25230 1 A G scaffold90 ScafM SNP 0010.scaffold00043 25241 1 T C scaffold90 ScafM SNP 0010.scaffold00043 25276 1 A G scaffold90 ScafM SNP 0010.scaffold00043 25293 1 C A scaffold90 ScafM SNP 0010.scaffold00043 25319 1 T A scaffold90 ScafM SNP 0010.scaffold00043 25351 1 A G scaffold90 ScafM SNP 0010.scaffold00043 25353 1 G A scaffold90 ScafM SNP 0010.scaffold00043 25385 1 C T scaffold90 ScafM SNP 0010.scaffold00043 25397 1 T G scaffold90 ScafM SNP 0010.scaffold00043 25410 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 25427 1 . T scaffold90 ScafM SNP 0010.scaffold00043 25429 1 C A scaffold90 ScafM SNP 0010.scaffold00043 25462 1 C A scaffold90 Both SNP 0010.scaffold00043 25505 1 T C scaffold90 ReadM SNP 0010.scaffold00043 25824 1 A C - ReadM SNP 0010.scaffold00043 25913 1 G T - ReadM SNP 0010.scaffold00043 25928 1 A G - Both SNP 0010.scaffold00043 25956 1 A G scaffold90 Both SNP 0010.scaffold00043 25960 1 G A scaffold90 Both SNP 0010.scaffold00043 26131 1 G A scaffold90 Both SNP 0010.scaffold00043 26167 1 A T scaffold90 ScafM SNP 0010.scaffold00043 26286 1 T C scaffold90 ScafM SNP 0010.scaffold00043 26292 1 A G scaffold90 ScafM SNP 0010.scaffold00043 26303 1 T C scaffold90 Both SNP 0010.scaffold00043 26327 1 T C scaffold90 Both SNP 0010.scaffold00043 26360 1 C G scaffold90 ScafM SNP 0010.scaffold00043 26438 2 GT TG scaffold90 ScafM SNP 0010.scaffold00043 26442 1 A G scaffold90 Both SNP 0010.scaffold00043 26469 1 A C scaffold90 Both SNP 0010.scaffold00043 26515 1 T C scaffold90 Both SNP 0010.scaffold00043 26519 1 C A scaffold90 Both SNP 0010.scaffold00043 26569 1 A G scaffold90 ScafM SNP 0010.scaffold00043 26597 2 TC CT scaffold90 Both SNP 0010.scaffold00043 26650 1 C G scaffold90 ScafM SNP 0010.scaffold00043 26732 1 G C scaffold90 ScafM SNP 0010.scaffold00043 26734 1 G A scaffold90 ScafM SNP 0010.scaffold00043 26738 1 T C scaffold90 ScafM SNP 0010.scaffold00043 26742 1 T G scaffold90 ScafM SNP 0010.scaffold00043 26758 2 GA AG scaffold90 ScafM SNP 0010.scaffold00043 26762 1 G T scaffold90 ScafM SNP 0010.scaffold00043 26770 1 T C scaffold90 Both SNP 0010.scaffold00043 26782 1 A G scaffold90 Both SNP 0010.scaffold00043 26815 1 G A scaffold90 Both SNP 0010.scaffold00043 26885 1 G A scaffold90 Both SNP 0010.scaffold00043 26926 1 A G scaffold90 Both SNP 0010.scaffold00043 26987 1 A T scaffold90 Both SNP 0010.scaffold00043 27157 1 C G scaffold90 Both SNP 0010.scaffold00043 27191 1 A C scaffold90 Both SNP 0010.scaffold00043 27202 1 A G scaffold90 Both SNP 0010.scaffold00043 27371 1 G C scaffold90 Both SNP 0010.scaffold00043 27421 1 G T scaffold90 Both SNP 0010.scaffold00043 27498 1 G A scaffold90 Both SNP 0010.scaffold00043 27654 1 T C scaffold90 Both SNP 0010.scaffold00043 27774 1 C T scaffold90 Both SNP 0010.scaffold00043 27926 1 A T scaffold90 Both SNP 0010.scaffold00043 28092 1 C A scaffold90 ScafM SNP 0010.scaffold00043 28181 1 A T scaffold90 Both SNP 0010.scaffold00043 28188 1 T C scaffold90 Both SNP 0010.scaffold00043 28195 1 G A scaffold90 Both SNP 0010.scaffold00043 28235 1 C T scaffold90 ScafM SNP 0010.scaffold00043 28270 1 A G scaffold90 Both SNP 0010.scaffold00043 28392 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 28520 1 . T scaffold90 Both SNP 0010.scaffold00043 28572 1 C T scaffold90 Both INDEL 0010.scaffold00043 28589 1 T . scaffold90 Both SNP 0010.scaffold00043 28883 1 G C scaffold90 Both SNP 0010.scaffold00043 29138 1 T C scaffold90 Both SNP 0010.scaffold00043 29196 1 T G scaffold90 Both SNP 0010.scaffold00043 29268 1 C T scaffold90 Both SNP 0010.scaffold00043 29467 1 C A scaffold90 Both SNP 0010.scaffold00043 29581 1 T C scaffold90 Both SNP 0010.scaffold00043 29626 1 G C scaffold90 Both SNP 0010.scaffold00043 29634 1 G T scaffold90 Both SNP 0010.scaffold00043 29687 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 29691 8 ........ ATGTTGCC scaffold90 Both SNP 0010.scaffold00043 29746 1 G A scaffold90 Both SNP 0010.scaffold00043 29968 1 G T scaffold90 Both SNP 0010.scaffold00043 30026 1 G C scaffold90 ScafM SNP 0010.scaffold00043 30047 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 30055 1 C . scaffold90 ScafM SNP 0010.scaffold00043 30062 1 C T scaffold90 ScafM SNP 0010.scaffold00043 30114 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 30146 7 ....... AGTTATC scaffold90 Both SNP 0010.scaffold00043 30170 1 A G scaffold90 Both SNP 0010.scaffold00043 30217 1 C T scaffold90 Both SNP 0010.scaffold00043 30224 1 T G scaffold90 Both INDEL 0010.scaffold00043 30327 1 . A scaffold90 ScafM SNP 0010.scaffold00043 30332 1 T A scaffold90 Both SNP 0010.scaffold00043 30524 1 T C scaffold90 Both SNP 0010.scaffold00043 30565 1 T C scaffold90 Both SNP 0010.scaffold00043 30672 1 G C scaffold90 Both SNP 0010.scaffold00043 30958 1 C T scaffold90 Both SNP 0010.scaffold00043 30979 1 C T scaffold90 Both SNP 0010.scaffold00043 31005 1 A G scaffold90 ScafM SNP 0010.scaffold00043 31013 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 31064 8 TCAATTAG ........ scaffold90 Both SNP 0010.scaffold00043 31103 1 C A scaffold90 Both SNP 0010.scaffold00043 31113 1 C A scaffold90 Both INDEL 0010.scaffold00043 31132 1 A . scaffold90 Both SNP 0010.scaffold00043 31281 1 G A scaffold90 ScafM SNP 0010.scaffold00043 31337 1 A T scaffold90 ScafM SNP 0010.scaffold00043 31345 1 T A scaffold90 Both SNP 0010.scaffold00043 31459 1 T A scaffold90 Both SNP 0010.scaffold00043 31630 1 T C scaffold90 ReadM SNP 0010.scaffold00043 31658 1 A T - ReadM SNP 0010.scaffold00043 31667 1 C T - ReadM SNP 0010.scaffold00043 31686 1 G A - ScafM INDEL 0010.scaffold00043 32216 1 . T scaffold90 Both SNP 0010.scaffold00043 34123 1 C T scaffold90 Both INDEL 0010.scaffold00043 34153 1 . T scaffold90 Both SNP 0010.scaffold00043 34211 1 T C scaffold90 Both SNP 0010.scaffold00043 34281 1 T A scaffold90 Both INDEL 0010.scaffold00043 34282 1 . T scaffold90 Both SNP 0010.scaffold00043 34405 1 A G scaffold90 Both SNP 0010.scaffold00043 34407 1 C T scaffold90 Both INDEL 0010.scaffold00043 34484 2 .. TC scaffold90 ScafM SNP 0010.scaffold00043 34562 1 A G scaffold90 ScafM SNP 0010.scaffold00043 34565 1 T A scaffold90 ScafM SNP 0010.scaffold00043 34619 3 AGC CAT scaffold90 ScafM SNP 0010.scaffold00043 34644 2 TC AT scaffold90 Both SNP 0010.scaffold00043 34681 1 A C scaffold90 ScafM SNP 0010.scaffold00043 34797 2 GT AC scaffold90 Both SNP 0010.scaffold00043 34911 1 C T scaffold90 ReadM SNP 0010.scaffold00043 35023 1 G C - ReadM SNP 0010.scaffold00043 35196 1 T C - ReadM SNP 0010.scaffold00043 35198 1 G A - ReadM INDEL 0010.scaffold00043 35212 1 A . - ReadM SNP 0010.scaffold00043 35359 1 G A - ReadM SNP 0010.scaffold00043 35367 1 T C - ReadM SNP 0010.scaffold00043 35695 1 T C - ReadM SNP 0010.scaffold00043 35806 1 G A - ReadM SNP 0010.scaffold00043 35822 1 T G - ReadM SNP 0010.scaffold00043 35870 1 T A - ReadM INDEL 0010.scaffold00043 36577 1 T . - ReadM SNP 0010.scaffold00043 36613 1 G A - ReadM SNP 0010.scaffold00043 36663 1 A G - ReadM SNP 0010.scaffold00043 36685 1 A G - ReadM SNP 0010.scaffold00043 36847 1 G T - ReadM SNP 0010.scaffold00043 36875 1 A T - ReadM SNP 0010.scaffold00043 37007 1 A G - ReadM SNP 0010.scaffold00043 37064 1 A T - ReadM SNP 0010.scaffold00043 37170 1 C T - ReadM SNP 0010.scaffold00043 37489 1 T A - ReadM SNP 0010.scaffold00043 37494 1 G A - ReadM SNP 0010.scaffold00043 37516 1 C T - ReadM SNP 0010.scaffold00043 37577 1 G A - ReadM SNP 0010.scaffold00043 37585 1 G C - Both SNP 0010.scaffold00043 37668 1 T C scaffold90 Both SNP 0010.scaffold00043 37687 1 G T scaffold90 ReadM SNP 0010.scaffold00043 37745 1 A C - ReadM SNP 0010.scaffold00043 37841 1 C T - ReadM SNP 0010.scaffold00043 38003 1 G A - ReadM SNP 0010.scaffold00043 38059 1 G C - ReadM SNP 0010.scaffold00043 38234 1 G A - ReadM SNP 0010.scaffold00043 38236 1 G A - ReadM SNP 0010.scaffold00043 38276 1 A G - ReadM SNP 0010.scaffold00043 38282 1 A G - ReadM SNP 0010.scaffold00043 38340 1 G A - ReadM SNP 0010.scaffold00043 38362 1 C T - ReadM INDEL 0010.scaffold00043 38496 1 . A - ReadM SNP 0010.scaffold00043 38733 1 T C - ReadM SNP 0010.scaffold00043 38767 1 C T - ReadM SNP 0010.scaffold00043 38838 1 C A - Both SNP 0010.scaffold00043 38923 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 41244 1 A . scaffold90 ScafM SNP 0010.scaffold00043 41246 1 A G scaffold90 ScafM SNP 0010.scaffold00043 41760 1 C T scaffold90 ScafM SNP 0010.scaffold00043 41782 1 G T scaffold90 ScafM SNP 0010.scaffold00043 41820 1 T A scaffold90 ScafM SNP 0010.scaffold00043 41859 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 41983 2 .. TC scaffold90 ScafM SNP 0010.scaffold00043 42027 1 T A scaffold90 Both SNP 0010.scaffold00043 42183 1 T A scaffold90 Both SNP 0010.scaffold00043 42680 1 G A scaffold90 ReadM SNP 0010.scaffold00043 43002 1 A G - ReadM SNP 0010.scaffold00043 43024 1 G A - Both SNP 0010.scaffold00043 43099 1 G C scaffold90 Both SNP 0010.scaffold00043 43113 1 T G scaffold90 Both SNP 0010.scaffold00043 43116 1 G A scaffold90 ScafM SNP 0010.scaffold00043 43143 1 G A scaffold90 ScafM SNP 0010.scaffold00043 43163 1 G A scaffold90 ScafM SNP 0010.scaffold00043 43202 1 A C scaffold90 ScafM SNP 0010.scaffold00043 43210 1 T G scaffold90 ScafM SNP 0010.scaffold00043 43228 1 G C scaffold90 ScafM SNP 0010.scaffold00043 43264 1 T A scaffold90 ScafM SNP 0010.scaffold00043 43277 1 G T scaffold90 Both SNP 0010.scaffold00043 43296 1 C A scaffold90 Both SNP 0010.scaffold00043 43431 1 T C scaffold90 Both SNP 0010.scaffold00043 43477 1 G A scaffold90 ScafM SNP 0010.scaffold00043 43497 1 T G scaffold90 ScafM SNP 0010.scaffold00043 43510 1 C T scaffold90 ScafM SNP 0010.scaffold00043 43528 1 C A scaffold90 ScafM SNP 0010.scaffold00043 43532 1 A G scaffold90 Both SNP 0010.scaffold00043 43543 1 C T scaffold90 Both SNP 0010.scaffold00043 43800 1 C A scaffold90 Both SNP 0010.scaffold00043 44492 1 C T scaffold90 ScafM SNP 0010.scaffold00043 44633 1 A G scaffold90 ScafM SNP 0010.scaffold00043 44934 1 T C scaffold90 ScafM SNP 0010.scaffold00043 45185 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 45202 1 T . scaffold90 ScafM SNP 0010.scaffold00043 45207 1 G A scaffold90 ScafM SNP 0010.scaffold00043 45209 2 AA GG scaffold90 ScafM SNP 0010.scaffold00043 45217 1 T C scaffold90 ScafM SNP 0010.scaffold00043 45234 1 A G scaffold90 ScafM SNP 0010.scaffold00043 45244 1 A T scaffold90 ScafM SNP 0010.scaffold00043 45246 2 CT TA scaffold90 ScafM SNP 0010.scaffold00043 45270 1 G A scaffold90 ScafM SNP 0010.scaffold00043 45276 1 A G scaffold90 ScafM SNP 0010.scaffold00043 45282 1 C G scaffold90 ScafM SNP 0010.scaffold00043 45295 1 A C scaffold90 ScafM SNP 0010.scaffold00043 45303 1 T C scaffold90 ScafM SNP 0010.scaffold00043 45336 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 45338 8 ........ TGATTGAT scaffold90 ScafM SNP 0010.scaffold00043 45364 1 A G scaffold90 ScafM SNP 0010.scaffold00043 45401 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 45417 4 GTAT .... scaffold90 ScafM SNP 0010.scaffold00043 45433 1 C T scaffold90 ScafM SNP 0010.scaffold00043 45438 1 T A scaffold90 ScafM SNP 0010.scaffold00043 45447 1 A G scaffold90 ScafM SNP 0010.scaffold00043 45450 1 C G scaffold90 ScafM SNP 0010.scaffold00043 45459 2 CT AC scaffold90 ScafM SNP 0010.scaffold00043 45483 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 45512 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 45516 1 A . scaffold90 ScafM SNP 0010.scaffold00043 45519 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 45522 1 . T scaffold90 ScafM SNP 0010.scaffold00043 45530 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 45550 3 ... CGT scaffold90 ScafM SNP 0010.scaffold00043 45553 2 GT AA scaffold90 ScafM SNP 0010.scaffold00043 45559 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 45573 1 A . scaffold90 ScafM SNP 0010.scaffold00043 45581 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 45611 10 .......... CCAAAAAGCA scaffold90 ScafM INDEL 0010.scaffold00043 45615 7 ....... CTCTTAA scaffold90 ScafM SNP 0010.scaffold00043 45646 1 A C scaffold90 ScafM SNP 0010.scaffold00043 45657 1 A T scaffold90 ScafM SNP 0010.scaffold00043 45667 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 45668 6 ...... TTGTTG scaffold90 ScafM SNP 0010.scaffold00043 45682 1 G T scaffold90 Both SNP 0010.scaffold00043 45701 1 T A scaffold90 ScafM SNP 0010.scaffold00043 45887 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 45899 2 AT .. scaffold90 ScafM INDEL 0010.scaffold00043 45904 1 G . scaffold90 ScafM INDEL 0010.scaffold00043 45906 1 G . scaffold90 ScafM SNP 0010.scaffold00043 45919 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 45971 1 . A scaffold90 ScafM SNP 0010.scaffold00043 45973 1 G A scaffold90 ScafM SNP 0010.scaffold00043 45977 1 T C scaffold90 ScafM SNP 0010.scaffold00043 45984 1 C A scaffold90 ScafM SNP 0010.scaffold00043 46017 1 A G scaffold90 ScafM SNP 0010.scaffold00043 46024 1 T C scaffold90 ScafM SNP 0010.scaffold00043 46026 1 C A scaffold90 ScafM SNP 0010.scaffold00043 46028 1 C A scaffold90 ScafM SNP 0010.scaffold00043 46051 1 T A scaffold90 ScafM SNP 0010.scaffold00043 46058 1 C T scaffold90 Both SNP 0010.scaffold00043 46068 1 G C scaffold90 Both SNP 0010.scaffold00043 46180 1 T C scaffold90 Both SNP 0010.scaffold00043 46217 1 C T scaffold90 ScafM SNP 0010.scaffold00043 46243 1 T A scaffold90 ScafM SNP 0010.scaffold00043 46247 1 C T scaffold90 ScafM SNP 0010.scaffold00043 46251 1 T C scaffold90 ScafM SNP 0010.scaffold00043 46284 2 CG AA scaffold90 ScafM INDEL 0010.scaffold00043 46368 28 TTGAAGTCTTGAACAGATAGTTGGAAGC ............................ scaffold90 ScafM SNP 0010.scaffold00043 46406 1 C A scaffold90 ScafM SNP 0010.scaffold00043 46433 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 46688 5 ..... ACTCT scaffold90 Both SNP 0010.scaffold00043 47177 1 T C scaffold90 Both SNP 0010.scaffold00043 47218 1 G A scaffold90 Both SNP 0010.scaffold00043 47369 1 T C scaffold90 Both SNP 0010.scaffold00043 47420 1 G A scaffold90 Both SNP 0010.scaffold00043 47480 1 A G scaffold90 Both SNP 0010.scaffold00043 47790 1 G A scaffold90 Both SNP 0010.scaffold00043 48024 1 T A scaffold90 Both SNP 0010.scaffold00043 48038 1 T C scaffold90 ScafM SNP 0010.scaffold00043 48125 1 T C scaffold90 ScafM SNP 0010.scaffold00043 48132 1 A G scaffold90 ScafM SNP 0010.scaffold00043 48148 1 C G scaffold90 ScafM SNP 0010.scaffold00043 48158 1 G A scaffold90 ScafM SNP 0010.scaffold00043 48255 1 C T scaffold90 ScafM SNP 0010.scaffold00043 48258 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 48333 11 TTAGTGATTGT ........... scaffold90 ScafM SNP 0010.scaffold00043 48362 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 48367 2 GA .. scaffold90 ScafM INDEL 0010.scaffold00043 48370 3 TTG ... scaffold90 ScafM INDEL 0010.scaffold00043 48377 1 T . scaffold90 ScafM INDEL 0010.scaffold00043 48384 1 T . scaffold90 ScafM SNP 0010.scaffold00043 48397 1 G A scaffold90 ScafM SNP 0010.scaffold00043 48404 1 C G scaffold90 ScafM SNP 0010.scaffold00043 48418 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 48441 4 TGTG .... scaffold90 ScafM INDEL 0010.scaffold00043 48447 3 TAG ... scaffold90 ScafM INDEL 0010.scaffold00043 48470 3 ... TCT scaffold90 ScafM INDEL 0010.scaffold00043 48471 1 . T scaffold90 ScafM SNP 0010.scaffold00043 48485 1 G T scaffold90 ScafM SNP 0010.scaffold00043 48504 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 49403 2 TT .. scaffold3193 ScafM SNP 0010.scaffold00043 49408 1 G A scaffold3193 ScafM SNP 0010.scaffold00043 51481 1 C A scaffold90 ScafM SNP 0010.scaffold00043 51484 1 A G scaffold90 ScafM SNP 0010.scaffold00043 51487 1 T C scaffold90 ScafM SNP 0010.scaffold00043 51490 1 G A scaffold90 ScafM SNP 0010.scaffold00043 51512 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 51530 1 . T scaffold90 ScafM SNP 0010.scaffold00043 51532 5 AAAAA TTTTT scaffold90 ScafM SNP 0010.scaffold00043 51540 1 G A scaffold90 ScafM SNP 0010.scaffold00043 51543 1 A T scaffold90 ScafM SNP 0010.scaffold00043 51548 1 G A scaffold90 ScafM SNP 0010.scaffold00043 51552 1 A T scaffold90 ScafM SNP 0010.scaffold00043 51586 1 T C scaffold90 ScafM SNP 0010.scaffold00043 51641 1 G A scaffold90 ScafM SNP 0010.scaffold00043 51649 1 G A scaffold90 ScafM SNP 0010.scaffold00043 51667 2 GA AT scaffold90 ScafM INDEL 0010.scaffold00043 51679 1 . A scaffold90 ScafM SNP 0010.scaffold00043 51683 1 C T scaffold90 ScafM SNP 0010.scaffold00043 51700 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 51720 19 ................... TATTAACTTTTGATAGTTT scaffold90 ScafM SNP 0010.scaffold00043 51740 1 A T scaffold90 ScafM SNP 0010.scaffold00043 51756 1 T A scaffold90 ScafM SNP 0010.scaffold00043 51785 1 T C scaffold90 ScafM SNP 0010.scaffold00043 51811 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 51823 23 GCTTCAAAGGATTAGTTGAACCT ....................... scaffold90 ScafM INDEL 0010.scaffold00043 51853 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 51873 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 51900 1 . A scaffold90 ScafM SNP 0010.scaffold00043 51912 1 C T scaffold90 ScafM SNP 0010.scaffold00043 51945 2 AG GT scaffold90 ScafM SNP 0010.scaffold00043 51972 1 A G scaffold90 ScafM SNP 0010.scaffold00043 51984 1 A C scaffold90 ScafM SNP 0010.scaffold00043 52030 1 C G scaffold90 ScafM SNP 0010.scaffold00043 52059 1 A T scaffold90 ScafM SNP 0010.scaffold00043 52096 1 T A scaffold90 ScafM SNP 0010.scaffold00043 52115 1 A G scaffold90 ScafM SNP 0010.scaffold00043 52128 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52134 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52140 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52149 1 T C scaffold90 ScafM SNP 0010.scaffold00043 52182 1 T A scaffold90 ScafM SNP 0010.scaffold00043 52197 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52199 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52218 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 52233 6 ...... GCAAAG scaffold90 ScafM INDEL 0010.scaffold00043 52235 4 .... TATT scaffold90 ScafM SNP 0010.scaffold00043 52238 1 C A scaffold90 ScafM SNP 0010.scaffold00043 52295 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52298 1 G T scaffold90 ScafM SNP 0010.scaffold00043 52340 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 52359 2 .. AA scaffold90 ScafM SNP 0010.scaffold00043 52361 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 52374 1 . G scaffold90 ScafM INDEL 0010.scaffold00043 52378 2 .. CA scaffold90 ScafM SNP 0010.scaffold00043 52392 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52419 1 C A scaffold90 ScafM SNP 0010.scaffold00043 52425 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52439 2 TG CT scaffold90 ScafM SNP 0010.scaffold00043 52450 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52481 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52495 1 G C scaffold90 ScafM SNP 0010.scaffold00043 52503 1 G C scaffold90 ScafM SNP 0010.scaffold00043 52525 1 T C scaffold90 ScafM SNP 0010.scaffold00043 52540 1 G C scaffold90 ScafM SNP 0010.scaffold00043 52561 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52575 1 T A scaffold90 ScafM SNP 0010.scaffold00043 52578 1 A T scaffold90 ScafM SNP 0010.scaffold00043 52607 1 G C scaffold90 ScafM SNP 0010.scaffold00043 52622 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 52634 8 AAAAACGC ........ scaffold90 ScafM INDEL 0010.scaffold00043 52644 4 TTTC .... scaffold90 ScafM SNP 0010.scaffold00043 52650 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 52653 1 T . scaffold90 ScafM SNP 0010.scaffold00043 52656 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 52660 1 C . scaffold90 ScafM INDEL 0010.scaffold00043 52662 4 AAAG .... scaffold90 ScafM SNP 0010.scaffold00043 52678 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52711 1 C A scaffold90 ScafM SNP 0010.scaffold00043 52737 1 A T scaffold90 ScafM SNP 0010.scaffold00043 52742 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52753 1 A C scaffold90 ScafM SNP 0010.scaffold00043 52756 1 A G scaffold90 ScafM SNP 0010.scaffold00043 52775 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 52820 1 . T scaffold90 ScafM SNP 0010.scaffold00043 52822 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52843 1 T A scaffold90 ScafM SNP 0010.scaffold00043 52857 1 C T scaffold90 ScafM SNP 0010.scaffold00043 52870 1 T C scaffold90 ScafM SNP 0010.scaffold00043 52874 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52895 1 A G scaffold90 ScafM SNP 0010.scaffold00043 52917 1 G A scaffold90 ScafM SNP 0010.scaffold00043 52919 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 52975 3 ... GTG scaffold90 ScafM SNP 0010.scaffold00043 53003 1 A G scaffold90 ScafM SNP 0010.scaffold00043 53018 1 G A scaffold90 ScafM SNP 0010.scaffold00043 53028 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 53034 2 TA .. scaffold90 ScafM SNP 0010.scaffold00043 53060 1 C T scaffold90 ScafM SNP 0010.scaffold00043 53099 1 A G scaffold90 ScafM SNP 0010.scaffold00043 53134 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 53968 3 ... GTT scaffold90 ScafM INDEL 0010.scaffold00043 53969 2 .. CG scaffold90 ScafM SNP 0010.scaffold00043 53992 1 G T scaffold90 ScafM SNP 0010.scaffold00043 53996 2 AA GG scaffold90 ScafM INDEL 0010.scaffold00043 53998 2 .. TG scaffold90 ScafM INDEL 0010.scaffold00043 54000 2 .. GG scaffold90 ScafM SNP 0010.scaffold00043 54004 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 54005 2 .. CG scaffold90 ScafM INDEL 0010.scaffold00043 54011 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 54045 1 C . scaffold90 ScafM INDEL 0010.scaffold00043 54047 1 A . scaffold90 ScafM SNP 0010.scaffold00043 54049 1 C T scaffold90 ScafM SNP 0010.scaffold00043 54060 1 C T scaffold90 ScafM SNP 0010.scaffold00043 54080 1 A C scaffold90 ScafM SNP 0010.scaffold00043 54232 1 G A scaffold90 ScafM SNP 0010.scaffold00043 54267 1 T C scaffold90 ScafM SNP 0010.scaffold00043 54270 1 G T scaffold90 Both SNP 0010.scaffold00043 54481 1 G A scaffold90 Both SNP 0010.scaffold00043 54674 1 A C scaffold90 Both SNP 0010.scaffold00043 54787 1 G A scaffold90 Both SNP 0010.scaffold00043 54824 1 G A scaffold90 Both INDEL 0010.scaffold00043 55014 1 . A scaffold90 Both SNP 0010.scaffold00043 55745 1 G A scaffold90 Both SNP 0010.scaffold00043 56071 1 T C scaffold90 Both SNP 0010.scaffold00043 56228 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 56479 2 .. AA scaffold90 ReadM INDEL 0010.scaffold00043 56486 2 .. AC - Both SNP 0010.scaffold00043 56537 1 A G scaffold90 Both SNP 0010.scaffold00043 56619 1 C T scaffold90 Both SNP 0010.scaffold00043 56976 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 56987 7 ....... CCATTGT scaffold90 Both SNP 0010.scaffold00043 57230 1 A T scaffold90 Both SNP 0010.scaffold00043 57278 1 G C scaffold90 Both SNP 0010.scaffold00043 57289 1 A T scaffold90 Both SNP 0010.scaffold00043 57601 1 C T scaffold90 Both SNP 0010.scaffold00043 57908 1 G T scaffold90 ScafM SNP 0010.scaffold00043 59301 1 C A scaffold90 ReadM SNP 0010.scaffold00043 59597 1 T C - ReadM SNP 0010.scaffold00043 59710 1 A T - Both SNP 0010.scaffold00043 59818 1 A G scaffold90 ReadM INDEL 0010.scaffold00043 59844 1 A . - ReadM SNP 0010.scaffold00043 59977 1 A T - ReadM SNP 0010.scaffold00043 60006 1 A G - Both SNP 0010.scaffold00043 60083 1 C A scaffold90 ReadM SNP 0010.scaffold00043 60321 1 T C - ReadM INDEL 0010.scaffold00043 60449 1 T . - ReadM SNP 0010.scaffold00043 60510 1 A G - ReadM SNP 0010.scaffold00043 60608 1 G T - ReadM SNP 0010.scaffold00043 60897 1 A C - ReadM SNP 0010.scaffold00043 60992 1 C T - Both SNP 0010.scaffold00043 61038 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 61297 8 ACTACACC ........ scaffold90 Both SNP 0010.scaffold00043 61312 1 A C scaffold90 Both SNP 0010.scaffold00043 61410 1 C T scaffold90 ScafM SNP 0010.scaffold00043 62096 1 T G scaffold90 ScafM SNP 0010.scaffold00043 62195 1 C T scaffold90 Both INDEL 0010.scaffold00043 62881 1 A . scaffold90 Both SNP 0010.scaffold00043 62919 1 T G scaffold90 Both SNP 0010.scaffold00043 62923 1 A G scaffold90 ReadM SNP 0010.scaffold00043 63109 1 A C - ReadM SNP 0010.scaffold00043 63116 1 T C - ReadM SNP 0010.scaffold00043 63274 1 C T - ReadM SNP 0010.scaffold00043 63327 2 TA CG - Both SNP 0010.scaffold00043 64223 1 T C scaffold90 Both SNP 0010.scaffold00043 64359 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 64657 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 64916 2 TT .. scaffold90 Both SNP 0010.scaffold00043 64970 1 A G scaffold90 Both SNP 0010.scaffold00043 64976 1 C A scaffold90 Both SNP 0010.scaffold00043 65327 1 T A scaffold90 Both SNP 0010.scaffold00043 65373 1 A G scaffold90 Both SNP 0010.scaffold00043 65377 1 A G scaffold90 Both SNP 0010.scaffold00043 65395 1 A T scaffold90 Both SNP 0010.scaffold00043 65446 1 T C scaffold90 Both INDEL 0010.scaffold00043 65556 1 . A scaffold90 ScafM SNP 0010.scaffold00043 65559 1 C A scaffold90 Both INDEL 0010.scaffold00043 65607 1 C . scaffold90 ScafM SNP 0010.scaffold00043 65700 2 AT TG scaffold90 Both SNP 0010.scaffold00043 65726 1 A T scaffold90 Both SNP 0010.scaffold00043 65828 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 66058 1 T . scaffold90 Both INDEL 0010.scaffold00043 66133 2 TT .. scaffold90 Both SNP 0010.scaffold00043 66401 1 C A scaffold90 Both INDEL 0010.scaffold00043 66447 1 . T scaffold90 ScafM SNP 0010.scaffold00043 66453 1 A G scaffold90 Both SNP 0010.scaffold00043 66821 1 A C scaffold90 Both SNP 0010.scaffold00043 66840 1 T C scaffold90 Both SNP 0010.scaffold00043 67946 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 68398 21 ..................... TTTGATTGTATAAGATGAGAT scaffold90 Both SNP 0010.scaffold00043 68422 1 T C scaffold90 Both SNP 0010.scaffold00043 68428 1 A T scaffold90 Both SNP 0010.scaffold00043 68519 1 C T scaffold90 Both SNP 0010.scaffold00043 68557 1 A T scaffold90 Both INDEL 0010.scaffold00043 68617 1 . A scaffold90 Both SNP 0010.scaffold00043 68644 1 G T scaffold90 Both SNP 0010.scaffold00043 68664 1 C A scaffold90 Both SNP 0010.scaffold00043 68688 1 G A scaffold90 ScafM SNP 0010.scaffold00043 68763 1 G A scaffold90 ScafM SNP 0010.scaffold00043 68765 1 A G scaffold90 Both SNP 0010.scaffold00043 68804 1 A G scaffold90 Both SNP 0010.scaffold00043 68970 1 G A scaffold90 Both SNP 0010.scaffold00043 69089 1 T G scaffold90 Both SNP 0010.scaffold00043 69282 1 C T scaffold90 ScafM SNP 0010.scaffold00043 69360 2 TC AT scaffold90 ScafM INDEL 0010.scaffold00043 69366 1 . C scaffold90 Both SNP 0010.scaffold00043 69387 1 T C scaffold90 Both INDEL 0010.scaffold00043 70275 1 T . scaffold90 Both SNP 0010.scaffold00043 70378 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 70593 8 ........ GGGTTTGA scaffold90 ReadM SNP 0010.scaffold00043 70687 1 A G - ReadM SNP 0010.scaffold00043 70779 1 A G - Both SNP 0010.scaffold00043 71186 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 71587 1 T . scaffold90 ScafM SNP 0010.scaffold00043 71589 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 71611 8 ........ GACTTGCA scaffold90 ScafM SNP 0010.scaffold00043 71928 1 G A scaffold90 ScafM SNP 0010.scaffold00043 72019 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 72026 4 .... TAGC scaffold90 ScafM SNP 0010.scaffold00043 72032 1 T G scaffold90 ScafM SNP 0010.scaffold00043 72034 1 T C scaffold90 ScafM SNP 0010.scaffold00043 72059 1 C A scaffold90 ScafM SNP 0010.scaffold00043 72068 1 G T scaffold90 ScafM SNP 0010.scaffold00043 72120 1 A G scaffold90 ScafM SNP 0010.scaffold00043 72129 1 G C scaffold90 ScafM SNP 0010.scaffold00043 72156 1 A T scaffold90 ScafM SNP 0010.scaffold00043 72158 1 C A scaffold90 ScafM SNP 0010.scaffold00043 72424 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 72450 7 ....... AGTAAGA scaffold90 ScafM SNP 0010.scaffold00043 72455 1 T C scaffold90 ScafM SNP 0010.scaffold00043 72466 1 C T scaffold90 ScafM SNP 0010.scaffold00043 72499 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 72515 4 AAAT .... scaffold90 ScafM INDEL 0010.scaffold00043 73319 2 AA .G scaffold90 ScafM SNP 0010.scaffold00043 73323 1 G C scaffold90 ScafM SNP 0010.scaffold00043 73366 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 73392 8 ........ ACGGTGAG scaffold90 ScafM SNP 0010.scaffold00043 73399 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 73419 1 . G scaffold90 ScafM INDEL 0010.scaffold00043 73480 8 GTCATATT ........ scaffold90 ScafM SNP 0010.scaffold00043 73497 1 T C scaffold90 ScafM SNP 0010.scaffold00043 73503 3 CAC ATT scaffold90 ScafM INDEL 0010.scaffold00043 73521 3 ... AAT scaffold90 ScafM INDEL 0010.scaffold00043 73522 1 . G scaffold90 ScafM INDEL 0010.scaffold00043 73549 2 GA .. scaffold90 ScafM SNP 0010.scaffold00043 73552 3 CGA TTT scaffold90 ScafM SNP 0010.scaffold00043 73556 3 ACG TTT scaffold90 ScafM SNP 0010.scaffold00043 73560 1 C T scaffold90 ScafM SNP 0010.scaffold00043 73562 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 73570 1 . C scaffold90 ScafM INDEL 0010.scaffold00043 73584 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 73586 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 73589 3 ATC ... scaffold90 ScafM SNP 0010.scaffold00043 73594 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 73598 2 CC .. scaffold90 ScafM SNP 0010.scaffold00043 73602 1 C G scaffold90 ScafM SNP 0010.scaffold00043 73606 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 73609 1 T . scaffold90 ScafM SNP 0010.scaffold00043 73611 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73613 2 AG TA scaffold90 ScafM SNP 0010.scaffold00043 73619 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73637 1 C A scaffold90 ScafM SNP 0010.scaffold00043 73662 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 73670 1 A . scaffold90 ScafM SNP 0010.scaffold00043 73686 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 73691 4 .... ATAT scaffold90 ScafM SNP 0010.scaffold00043 73710 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73712 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 73716 1 G . scaffold90 ScafM SNP 0010.scaffold00043 73721 1 T A scaffold90 ScafM SNP 0010.scaffold00043 73723 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73736 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 73740 2 .. AA scaffold90 ScafM INDEL 0010.scaffold00043 73743 4 .... AACA scaffold90 ScafM INDEL 0010.scaffold00043 73746 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 73748 1 . C scaffold90 ScafM SNP 0010.scaffold00043 73759 1 C T scaffold90 ScafM SNP 0010.scaffold00043 73764 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 73768 5 AAATT ..... scaffold90 ScafM SNP 0010.scaffold00043 73775 1 A G scaffold90 ScafM SNP 0010.scaffold00043 73782 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73801 1 T A scaffold90 ScafM SNP 0010.scaffold00043 73813 1 A G scaffold90 ScafM SNP 0010.scaffold00043 73832 1 A T scaffold90 ScafM SNP 0010.scaffold00043 73847 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73876 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73904 1 T C scaffold90 ScafM SNP 0010.scaffold00043 73915 1 T C scaffold90 ScafM SNP 0010.scaffold00043 73920 1 G A scaffold90 ScafM SNP 0010.scaffold00043 73923 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 73951 3 TAT ... scaffold90 ScafM SNP 0010.scaffold00043 73960 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 73978 3 ... ATG scaffold90 ScafM SNP 0010.scaffold00043 74019 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 74030 1 . C scaffold90 ScafM INDEL 0010.scaffold00043 74039 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 74042 2 AC GT scaffold90 ScafM SNP 0010.scaffold00043 74047 1 G A scaffold90 ScafM SNP 0010.scaffold00043 74057 1 A T scaffold90 ScafM SNP 0010.scaffold00043 74068 1 A T scaffold90 ScafM SNP 0010.scaffold00043 74081 1 A T scaffold90 ScafM SNP 0010.scaffold00043 74093 1 G A scaffold90 ScafM SNP 0010.scaffold00043 74111 1 T G scaffold90 Both SNP 0010.scaffold00043 74114 1 A T scaffold90 Both SNP 0010.scaffold00043 74215 1 T C scaffold90 Both SNP 0010.scaffold00043 74317 1 G A scaffold90 Both SNP 0010.scaffold00043 74410 1 T G scaffold90 ScafM SNP 0010.scaffold00043 74951 2 CG TA scaffold90 Both INDEL 0010.scaffold00043 75031 1 A . scaffold90 ScafM SNP 0010.scaffold00043 75199 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 75219 5 GCCGG ..... scaffold90 ScafM SNP 0010.scaffold00043 75289 1 A G scaffold90 ScafM SNP 0010.scaffold00043 75293 1 A C scaffold90 ScafM SNP 0010.scaffold00043 75301 1 C G scaffold90 ScafM SNP 0010.scaffold00043 75303 1 A G scaffold90 Both SNP 0010.scaffold00043 75341 1 G C scaffold90 ReadM SNP 0010.scaffold00043 75450 1 G A - ReadM SNP 0010.scaffold00043 75454 1 C G - ReadM SNP 0010.scaffold00043 75463 1 G T - ScafM SNP 0010.scaffold00043 76416 1 A G scaffold90 ScafM SNP 0010.scaffold00043 76436 1 A T scaffold90 ScafM SNP 0010.scaffold00043 76440 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 76567 12 ............ ACTATGACTATG scaffold90 ScafM SNP 0010.scaffold00043 76603 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 76632 8 ........ ACTATATT scaffold90 ScafM INDEL 0010.scaffold00043 76750 19 ................... CCCCACTACTAAAATGGAA scaffold90 Both SNP 0010.scaffold00043 76788 1 C A scaffold90 ScafM SNP 0010.scaffold00043 76875 1 C T scaffold90 ScafM SNP 0010.scaffold00043 77380 1 T A scaffold90 ScafM SNP 0010.scaffold00043 77447 2 AA TT scaffold90 ScafM INDEL 0010.scaffold00043 77495 4 ACAC ..GT scaffold90 ScafM SNP 0010.scaffold00043 77529 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 77570 1 . A scaffold90 ScafM SNP 0010.scaffold00043 77624 1 T G scaffold90 ScafM SNP 0010.scaffold00043 77731 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 77923 4 .... AAAA scaffold90 Both SNP 0010.scaffold00043 78111 1 T G scaffold90 Both SNP 0010.scaffold00043 78175 1 C T scaffold90 Both SNP 0010.scaffold00043 78188 1 T G scaffold90 Both SNP 0010.scaffold00043 78240 1 G C scaffold90 Both SNP 0010.scaffold00043 78274 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 78348 4 ATCA .... scaffold90 ScafM SNP 0010.scaffold00043 78410 1 C T scaffold90 ScafM SNP 0010.scaffold00043 78419 1 G C scaffold90 ScafM SNP 0010.scaffold00043 78450 1 T C scaffold90 ScafM SNP 0010.scaffold00043 78456 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 78459 7 TATGCTG ....... scaffold90 ScafM SNP 0010.scaffold00043 78758 1 G A scaffold90 ScafM SNP 0010.scaffold00043 78844 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 78986 2 GA .. scaffold90 ScafM SNP 0010.scaffold00043 78997 1 A T scaffold90 ScafM SNP 0010.scaffold00043 79004 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 79025 1 A . scaffold90 ScafM SNP 0010.scaffold00043 79040 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 79070 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 81828 1 . C scaffold90 ScafM INDEL 0010.scaffold00043 81854 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 81857 3 ... AAT scaffold90 ScafM INDEL 0010.scaffold00043 81860 1 . T scaffold90 ScafM SNP 0010.scaffold00043 81906 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 81952 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 81979 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 82053 1 . A scaffold90 ScafM SNP 0010.scaffold00043 82173 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 82227 3 ... TGA scaffold90 ScafM INDEL 0010.scaffold00043 82263 9 TGATGAAGT ......... scaffold90 ScafM SNP 0010.scaffold00043 82317 1 A G scaffold90 ScafM SNP 0010.scaffold00043 82320 1 A G scaffold90 ScafM SNP 0010.scaffold00043 82389 1 C A scaffold90 ScafM SNP 0010.scaffold00043 82399 1 A G scaffold90 ScafM SNP 0010.scaffold00043 82478 2 TT GG scaffold90 ScafM SNP 0010.scaffold00043 82542 1 G A scaffold90 ScafM SNP 0010.scaffold00043 82913 1 G A scaffold90 Both SNP 0010.scaffold00043 82986 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 83082 1 . T scaffold90 ScafM SNP 0010.scaffold00043 83093 1 C G scaffold90 ScafM SNP 0010.scaffold00043 83111 1 G A scaffold90 ScafM SNP 0010.scaffold00043 83259 1 T C scaffold90 ScafM SNP 0010.scaffold00043 83279 1 G A scaffold90 ScafM SNP 0010.scaffold00043 83287 2 TG AA scaffold90 ScafM SNP 0010.scaffold00043 83297 1 G A scaffold90 ScafM SNP 0010.scaffold00043 83312 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 83318 1 . G scaffold90 Both SNP 0010.scaffold00043 83368 1 A T scaffold90 Both SNP 0010.scaffold00043 83380 1 T C scaffold90 Both SNP 0010.scaffold00043 83436 1 T G scaffold90 Both SNP 0010.scaffold00043 83466 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 83494 41 ......................................... TATTAACACTTTGAGGATAACTTTATATATTTGAAGGGTAA scaffold90 Both INDEL 0010.scaffold00043 83565 1 A . scaffold90 Both SNP 0010.scaffold00043 83578 1 C T scaffold90 Both SNP 0010.scaffold00043 83614 1 C T scaffold90 Both SNP 0010.scaffold00043 83668 1 C T scaffold90 Both SNP 0010.scaffold00043 83684 1 C T scaffold90 Both SNP 0010.scaffold00043 83702 1 G A scaffold90 Both SNP 0010.scaffold00043 83752 1 C T scaffold90 Both SNP 0010.scaffold00043 83773 1 G A scaffold90 Both SNP 0010.scaffold00043 83824 1 C T scaffold90 Both SNP 0010.scaffold00043 83987 1 C T scaffold90 ReadM SNP 0010.scaffold00043 84032 1 A T - ScafM SNP 0010.scaffold00043 84147 1 A T scaffold90 ScafM SNP 0010.scaffold00043 84169 1 C T scaffold90 ScafM SNP 0010.scaffold00043 84185 1 A G scaffold90 ScafM SNP 0010.scaffold00043 84238 1 G A scaffold90 ScafM SNP 0010.scaffold00043 84283 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 84380 1 A . scaffold90 ScafM SNP 0010.scaffold00043 84382 1 A G scaffold90 ScafM SNP 0010.scaffold00043 84390 1 A T scaffold90 ScafM SNP 0010.scaffold00043 84395 1 G A scaffold90 ScafM SNP 0010.scaffold00043 85413 1 G C scaffold90 ScafM SNP 0010.scaffold00043 85422 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 85493 35 ................................... TAGTCACTAGTCACTAGTCACTAGTCACTAGTCAC scaffold90 ScafM SNP 0010.scaffold00043 85530 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 85545 1 . T scaffold90 ScafM SNP 0010.scaffold00043 85587 1 A C scaffold90 ScafM SNP 0010.scaffold00043 85600 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 85635 4 .... GCAT scaffold90 ScafM SNP 0010.scaffold00043 85743 1 A G scaffold90 ScafM SNP 0010.scaffold00043 86341 1 T C scaffold6448 ScafM SNP 0010.scaffold00043 86394 1 A G scaffold6448 ScafM SNP 0010.scaffold00043 86472 1 C T scaffold6448 ScafM SNP 0010.scaffold00043 86498 1 T C scaffold6448 ScafM SNP 0010.scaffold00043 86501 1 C T scaffold6448 ScafM SNP 0010.scaffold00043 86510 1 A T scaffold6448 ScafM SNP 0010.scaffold00043 86517 1 G T scaffold6448 ScafM SNP 0010.scaffold00043 86527 1 T C scaffold6448 ScafM SNP 0010.scaffold00043 86539 1 A C scaffold6448 ScafM SNP 0010.scaffold00043 86587 1 C T scaffold6448 Both SNP 0010.scaffold00043 86688 1 A G scaffold6448 ReadM SNP 0010.scaffold00043 86776 1 T C - ReadM SNP 0010.scaffold00043 86784 1 A G - ReadM SNP 0010.scaffold00043 87946 1 G A - ReadM SNP 0010.scaffold00043 87977 1 T C - ScafM SNP 0010.scaffold00043 88034 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 88071 3 ... AAT scaffold90 ScafM SNP 0010.scaffold00043 88230 1 T A scaffold90 ScafM SNP 0010.scaffold00043 88249 1 C T scaffold90 Both SNP 0010.scaffold00043 88348 1 A G scaffold90 ReadM SNP 0010.scaffold00043 88497 1 T C - ReadM SNP 0010.scaffold00043 88535 1 G A - ReadM SNP 0010.scaffold00043 88571 1 G A - ReadM SNP 0010.scaffold00043 88594 1 G T - ReadM SNP 0010.scaffold00043 88635 1 A G - ReadM SNP 0010.scaffold00043 88667 1 A G - Both SNP 0010.scaffold00043 88687 1 A C scaffold90 ScafM SNP 0010.scaffold00043 88820 1 A T scaffold90 ReadM SNP 0010.scaffold00043 89010 1 G A - ReadM SNP 0010.scaffold00043 89016 1 C T - ReadM SNP 0010.scaffold00043 89051 1 A G - ReadM SNP 0010.scaffold00043 89058 1 A G - ReadM SNP 0010.scaffold00043 89208 1 T C - ScafM SNP 0010.scaffold00043 89346 1 G A scaffold90 ScafM SNP 0010.scaffold00043 89372 1 T C scaffold90 ScafM SNP 0010.scaffold00043 89378 1 G A scaffold90 ScafM SNP 0010.scaffold00043 91150 1 T G scaffold90 ScafM SNP 0010.scaffold00043 91308 2 CC AA scaffold90 ScafM SNP 0010.scaffold00043 91312 1 C T scaffold90 ScafM SNP 0010.scaffold00043 91315 1 C A scaffold90 ScafM SNP 0010.scaffold00043 91339 1 T C scaffold90 Both SNP 0010.scaffold00043 91387 1 C G scaffold90 Both INDEL 0010.scaffold00043 91426 1 . G scaffold90 Both SNP 0010.scaffold00043 91593 1 T A scaffold90 ScafM SNP 0010.scaffold00043 91679 2 AG CA scaffold90 ScafM INDEL 0010.scaffold00043 91685 2 .. TA scaffold90 ScafM SNP 0010.scaffold00043 91695 1 T A scaffold90 ScafM SNP 0010.scaffold00043 91701 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 92053 4 AAAA .... scaffold90 Both SNP 0010.scaffold00043 92243 1 T C scaffold90 Both SNP 0010.scaffold00043 92290 1 T A scaffold90 Both SNP 0010.scaffold00043 92344 1 T C scaffold90 ReadM SNP 0010.scaffold00043 92433 1 T C - ReadM SNP 0010.scaffold00043 92439 1 G T - ScafM SNP 0010.scaffold00043 93002 1 T C scaffold90 Both SNP 0010.scaffold00043 93017 1 G A scaffold90 Both SNP 0010.scaffold00043 93032 1 T C scaffold90 Both SNP 0010.scaffold00043 93162 1 T A scaffold90 ScafM SNP 0010.scaffold00043 93177 1 C G scaffold90 ScafM SNP 0010.scaffold00043 93195 1 T C scaffold90 ScafM SNP 0010.scaffold00043 93201 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 93210 3 ATT ... scaffold90 ScafM INDEL 0010.scaffold00043 93215 1 T . scaffold90 ScafM SNP 0010.scaffold00043 93222 1 T C scaffold90 ScafM SNP 0010.scaffold00043 93381 1 A C scaffold90 ScafM SNP 0010.scaffold00043 93399 1 A G scaffold90 ScafM SNP 0010.scaffold00043 93409 1 C T scaffold90 ScafM SNP 0010.scaffold00043 93417 1 T C scaffold90 ScafM SNP 0010.scaffold00043 93556 1 C T scaffold90 ScafM SNP 0010.scaffold00043 93558 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 93567 8 ........ CAATGAGA scaffold90 ScafM INDEL 0010.scaffold00043 93586 1 T . scaffold90 ScafM SNP 0010.scaffold00043 93591 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 93622 2 AC .G scaffold90 ScafM SNP 0010.scaffold00043 93626 1 G A scaffold90 ScafM SNP 0010.scaffold00043 93654 1 A G scaffold90 ScafM SNP 0010.scaffold00043 93691 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 93694 5 ..... AAATT scaffold90 ScafM SNP 0010.scaffold00043 93701 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 93758 10 TGCATTTTTT .......... scaffold90 ScafM SNP 0010.scaffold00043 93777 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 93811 4 TATC .... scaffold90 ScafM INDEL 0010.scaffold00043 93875 4 AAGT .... scaffold90 ScafM SNP 0010.scaffold00043 93886 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 93973 7 AAGTGGG ....... scaffold90 Both SNP 0010.scaffold00043 93995 1 A C scaffold90 Both SNP 0010.scaffold00043 94010 1 A G scaffold90 Both SNP 0010.scaffold00043 94065 1 G T scaffold90 Both SNP 0010.scaffold00043 94095 1 G T scaffold90 Both INDEL 0010.scaffold00043 94098 1 G . scaffold90 ScafM SNP 0010.scaffold00043 94207 1 A G scaffold90 ScafM SNP 0010.scaffold00043 94217 1 T A scaffold90 ScafM SNP 0010.scaffold00043 94241 1 A G scaffold90 ScafM SNP 0010.scaffold00043 94261 1 T A scaffold90 ScafM SNP 0010.scaffold00043 94263 1 T C scaffold90 ReadM SNP 0010.scaffold00043 94315 1 A G - ReadM SNP 0010.scaffold00043 94337 1 T G - ReadM SNP 0010.scaffold00043 94384 1 C T - ReadM SNP 0010.scaffold00043 94394 1 T C - ReadM SNP 0010.scaffold00043 94479 1 T A - Both SNP 0010.scaffold00043 94687 1 C A scaffold90 ScafM SNP 0010.scaffold00043 94696 1 A G scaffold90 ScafM SNP 0010.scaffold00043 94698 1 G A scaffold90 ScafM SNP 0010.scaffold00043 94721 1 T C scaffold90 Both INDEL 0010.scaffold00043 94724 1 . A scaffold90 Both SNP 0010.scaffold00043 94878 1 C A scaffold90 Both SNP 0010.scaffold00043 94992 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 95210 8 ........ CTACTTCC scaffold90 ReadM SNP 0010.scaffold00043 95211 1 T C - ScafM INDEL 0010.scaffold00043 95211 1 . C scaffold90 ReadM SNP 0010.scaffold00043 95232 1 A G - Both SNP 0010.scaffold00043 95443 1 C T scaffold90 Both SNP 0010.scaffold00043 95576 1 A G scaffold90 Both SNP 0010.scaffold00043 95596 1 A C scaffold90 Both SNP 0010.scaffold00043 95836 1 G T scaffold90 ScafM SNP 0010.scaffold00043 96087 1 G A scaffold90 Both SNP 0010.scaffold00043 96324 1 C T scaffold90 Both INDEL 0010.scaffold00043 96358 1 . A scaffold90 ScafM SNP 0010.scaffold00043 96381 1 A G scaffold90 ScafM SNP 0010.scaffold00043 96421 1 T G scaffold90 ScafM SNP 0010.scaffold00043 96611 1 G A scaffold90 ScafM SNP 0010.scaffold00043 96657 1 T C scaffold90 ScafM SNP 0010.scaffold00043 96662 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 96752 1 . C scaffold90 ScafM SNP 0010.scaffold00043 96754 2 TT AG scaffold90 ScafM SNP 0010.scaffold00043 96763 1 C G scaffold90 ScafM SNP 0010.scaffold00043 96807 1 G A scaffold90 ScafM SNP 0010.scaffold00043 96887 1 G A scaffold90 ScafM SNP 0010.scaffold00043 96890 1 C T scaffold90 ScafM SNP 0010.scaffold00043 96904 2 GC AT scaffold90 ScafM SNP 0010.scaffold00043 96933 1 A T scaffold90 ScafM SNP 0010.scaffold00043 96947 1 T C scaffold90 ScafM SNP 0010.scaffold00043 96955 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 96978 2 TA .. scaffold90 ScafM SNP 0010.scaffold00043 97155 1 T A scaffold90 ScafM SNP 0010.scaffold00043 97162 1 C T scaffold90 ScafM SNP 0010.scaffold00043 97172 1 T C scaffold90 ScafM SNP 0010.scaffold00043 97180 1 G T scaffold90 ScafM SNP 0010.scaffold00043 97829 1 A G scaffold90 ScafM SNP 0010.scaffold00043 97838 1 G A scaffold90 ScafM SNP 0010.scaffold00043 97852 1 C T scaffold90 ScafM SNP 0010.scaffold00043 97949 1 T C scaffold90 Both SNP 0010.scaffold00043 98111 1 A G scaffold90 Both SNP 0010.scaffold00043 98930 1 G A scaffold90 Both SNP 0010.scaffold00043 99300 1 T A scaffold90 Both SNP 0010.scaffold00043 99308 1 G A scaffold90 Both SNP 0010.scaffold00043 99314 1 G A scaffold90 Both SNP 0010.scaffold00043 99484 1 G C scaffold90 Both SNP 0010.scaffold00043 99612 1 A G scaffold90 Both SNP 0010.scaffold00043 99618 1 C A scaffold90 Both SNP 0010.scaffold00043 100025 1 T C scaffold90 Both SNP 0010.scaffold00043 100549 1 T C scaffold90 Both SNP 0010.scaffold00043 100579 1 A C scaffold90 Both SNP 0010.scaffold00043 100587 1 T C scaffold90 Both SNP 0010.scaffold00043 100722 1 A T scaffold90 Both SNP 0010.scaffold00043 100730 1 C T scaffold90 Both INDEL 0010.scaffold00043 100812 1 . T scaffold90 Both SNP 0010.scaffold00043 101170 1 C T scaffold90 Both SNP 0010.scaffold00043 101185 1 G C scaffold90 ReadM SNP 0010.scaffold00043 101316 1 T G - ReadM SNP 0010.scaffold00043 101340 1 G A - ReadM SNP 0010.scaffold00043 101369 1 G A - ScafM SNP 0010.scaffold00043 102947 1 T C scaffold90 ScafM SNP 0010.scaffold00043 102998 1 T C scaffold90 ScafM SNP 0010.scaffold00043 103005 1 A G scaffold90 ScafM SNP 0010.scaffold00043 103040 1 C T scaffold90 ScafM SNP 0010.scaffold00043 103061 1 C T scaffold90 ReadM SNP 0010.scaffold00043 103471 1 C T - ReadM SNP 0010.scaffold00043 103516 1 G A - ReadM SNP 0010.scaffold00043 104088 1 C T - ReadM SNP 0010.scaffold00043 104124 1 G C - ReadM SNP 0010.scaffold00043 104133 1 T C - ReadM SNP 0010.scaffold00043 104181 1 T A - ReadM SNP 0010.scaffold00043 104279 1 G A - ReadM SNP 0010.scaffold00043 104436 1 C A - ReadM SNP 0010.scaffold00043 104489 1 A G - ReadM SNP 0010.scaffold00043 104595 1 C T - ReadM SNP 0010.scaffold00043 104650 1 C A - ReadM SNP 0010.scaffold00043 104681 1 T C - ReadM SNP 0010.scaffold00043 104712 1 A C - ReadM SNP 0010.scaffold00043 104780 1 G C - ReadM SNP 0010.scaffold00043 104830 1 C A - ReadM SNP 0010.scaffold00043 104833 1 T C - ReadM SNP 0010.scaffold00043 104908 2 CA TG - ReadM SNP 0010.scaffold00043 104987 1 G A - ReadM SNP 0010.scaffold00043 105081 1 A G - ReadM SNP 0010.scaffold00043 105083 1 C T - ReadM SNP 0010.scaffold00043 105123 1 G T - ReadM SNP 0010.scaffold00043 105197 1 C A - ReadM SNP 0010.scaffold00043 105234 1 A G - ReadM SNP 0010.scaffold00043 105335 1 T C - ReadM SNP 0010.scaffold00043 105503 1 G A - ReadM SNP 0010.scaffold00043 105571 1 A G - ReadM SNP 0010.scaffold00043 106339 1 G T - ReadM SNP 0010.scaffold00043 106397 1 C T - ReadM SNP 0010.scaffold00043 106473 1 G T - ReadM INDEL 0010.scaffold00043 106970 2 .. TA - ReadM SNP 0010.scaffold00043 107187 1 A G - ReadM SNP 0010.scaffold00043 107232 1 G A - ReadM SNP 0010.scaffold00043 107250 1 C T - ReadM SNP 0010.scaffold00043 107281 1 A G - ReadM SNP 0010.scaffold00043 107287 1 A C - ReadM SNP 0010.scaffold00043 107517 1 T G - ReadM SNP 0010.scaffold00043 107559 1 T C - ReadM SNP 0010.scaffold00043 107644 1 C A - ReadM SNP 0010.scaffold00043 107650 1 C T - ScafM SNP 0010.scaffold00043 108045 1 A G scaffold90 ScafM SNP 0010.scaffold00043 108056 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 108090 7 AACTCTC ....... scaffold90 ScafM SNP 0010.scaffold00043 108108 1 G C scaffold90 ScafM SNP 0010.scaffold00043 108136 1 C T scaffold90 ScafM SNP 0010.scaffold00043 108138 2 AG GA scaffold90 ScafM SNP 0010.scaffold00043 108155 1 A T scaffold90 ScafM SNP 0010.scaffold00043 108176 1 G A scaffold90 ScafM SNP 0010.scaffold00043 108195 1 C T scaffold90 ScafM SNP 0010.scaffold00043 108211 1 A T scaffold90 ScafM SNP 0010.scaffold00043 108217 2 TA CG scaffold90 ScafM INDEL 0010.scaffold00043 108232 1 . T scaffold90 ScafM SNP 0010.scaffold00043 108240 1 T A scaffold90 ScafM SNP 0010.scaffold00043 108250 1 C T scaffold90 ScafM SNP 0010.scaffold00043 108292 2 AC TA scaffold90 ScafM SNP 0010.scaffold00043 108323 1 T C scaffold90 ScafM SNP 0010.scaffold00043 108346 1 T C scaffold90 ScafM SNP 0010.scaffold00043 108348 1 C A scaffold90 ScafM SNP 0010.scaffold00043 108350 1 G A scaffold90 ScafM SNP 0010.scaffold00043 108367 2 TA CG scaffold90 ReadM INDEL 0010.scaffold00043 108415 1 A . - Both INDEL 0010.scaffold00043 108611 1 T . scaffold90 Both SNP 0010.scaffold00043 108815 1 A G scaffold90 Both SNP 0010.scaffold00043 108917 1 G C scaffold90 ScafM SNP 0010.scaffold00043 109044 2 AA TT scaffold90 Both SNP 0010.scaffold00043 109102 1 G C scaffold90 Both SNP 0010.scaffold00043 109222 1 C T scaffold90 Both SNP 0010.scaffold00043 109306 1 T C scaffold90 Both SNP 0010.scaffold00043 109335 1 C T scaffold90 Both SNP 0010.scaffold00043 109557 1 T G scaffold90 Both SNP 0010.scaffold00043 109660 1 G A scaffold90 Both INDEL 0010.scaffold00043 109801 1 . C scaffold90 Both SNP 0010.scaffold00043 110127 1 G A scaffold90 Both SNP 0010.scaffold00043 110364 1 C A scaffold90 ReadM SNP 0010.scaffold00043 110543 1 C T - ReadM SNP 0010.scaffold00043 111356 1 G A - Both SNP 0010.scaffold00043 111465 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 111573 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 111591 3 TTT ... scaffold90 ScafM SNP 0010.scaffold00043 111596 1 T A scaffold90 ScafM SNP 0010.scaffold00043 111616 1 T G scaffold90 ScafM SNP 0010.scaffold00043 111780 1 A G scaffold90 Both SNP 0010.scaffold00043 111948 1 C T scaffold90 Both SNP 0010.scaffold00043 111998 1 C T scaffold90 Both SNP 0010.scaffold00043 112446 1 T C scaffold90 Both INDEL 0010.scaffold00043 112473 1 . A scaffold90 ReadM SNP 0010.scaffold00043 112708 1 T C - ReadM SNP 0010.scaffold00043 112750 1 A T - Both SNP 0010.scaffold00043 113011 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 113114 8 ACTATATA ........ scaffold90 Both SNP 0010.scaffold00043 113178 1 C A scaffold90 ScafM SNP 0010.scaffold00043 113766 1 C T scaffold90 Both SNP 0010.scaffold00043 113769 1 A G scaffold90 Both SNP 0010.scaffold00043 114235 1 G A scaffold90 ScafM SNP 0010.scaffold00043 114379 1 A G scaffold90 Both SNP 0010.scaffold00043 114604 1 G A scaffold90 Both INDEL 0010.scaffold00043 115215 1 . A scaffold90 ScafM SNP 0010.scaffold00043 115401 1 T A scaffold90 ScafM SNP 0010.scaffold00043 115425 1 T A scaffold90 ReadM SNP 0010.scaffold00043 115868 1 A T - ReadM INDEL 0010.scaffold00043 116252 2 AA .. - ReadM SNP 0010.scaffold00043 116468 1 A C - ReadM SNP 0010.scaffold00043 116600 1 A G - ReadM SNP 0010.scaffold00043 116617 1 C T - ReadM SNP 0010.scaffold00043 116701 1 A T - ReadM SNP 0010.scaffold00043 116712 1 G A - ReadM INDEL 0010.scaffold00043 116759 1 . T - ReadM SNP 0010.scaffold00043 118374 1 C T - ReadM INDEL 0010.scaffold00043 123142 1 C . - ScafM SNP 0010.scaffold00043 123658 1 C T scaffold33287 ScafM SNP 0010.scaffold00043 123735 1 A G scaffold33287 ScafM SNP 0010.scaffold00043 123747 1 T G scaffold33287 ScafM SNP 0010.scaffold00043 127730 2 GG TA scaffold90 ScafM SNP 0010.scaffold00043 127735 1 G A scaffold90 ScafM SNP 0010.scaffold00043 127744 1 T C scaffold90 ScafM SNP 0010.scaffold00043 127753 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 127757 2 .. CA scaffold90 ScafM SNP 0010.scaffold00043 127807 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 127831 10 .......... ATCAAGGATG scaffold90 ScafM INDEL 0010.scaffold00043 127835 3 ... GGC scaffold90 ScafM INDEL 0010.scaffold00043 127836 1 . T scaffold90 ScafM SNP 0010.scaffold00043 127838 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 127840 4 ...C GTTA scaffold90 ScafM SNP 0010.scaffold00043 127843 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 127845 2 .. TG scaffold90 ScafM INDEL 0010.scaffold00043 127846 1 . G scaffold90 ScafM INDEL 0010.scaffold00043 127847 1 . T scaffold90 ScafM SNP 0010.scaffold00043 127850 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 127851 3 ... TGA scaffold90 ScafM INDEL 0010.scaffold00043 127852 2 .. CG scaffold90 ScafM INDEL 0010.scaffold00043 127854 3 ... AGG scaffold90 ScafM INDEL 0010.scaffold00043 127855 1 . C scaffold90 ScafM SNP 0010.scaffold00043 127857 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 127859 2 .. GT scaffold90 ScafM INDEL 0010.scaffold00043 127860 2 .. CG scaffold90 ScafM INDEL 0010.scaffold00043 127862 15 ............... TCCCCCCTCCCCTTC scaffold90 ScafM INDEL 0010.scaffold00043 127865 1 . G scaffold90 ScafM SNP 0010.scaffold00043 127868 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 127869 16 ................ TTGCCTTCGTGGCTCA scaffold90 ScafM INDEL 0010.scaffold00043 127872 2 .. GG scaffold90 ScafM INDEL 0010.scaffold00043 127875 6 ...... AAAAAA scaffold90 ScafM INDEL 0010.scaffold00043 127878 5 ..... TTGCC scaffold90 ScafM INDEL 0010.scaffold00043 127879 3 ..G TAA scaffold90 ScafM INDEL 0010.scaffold00043 127885 5 ..... CTTCA scaffold90 ScafM INDEL 0010.scaffold00043 127886 1 . T scaffold90 ScafM SNP 0010.scaffold00043 127931 1 T G scaffold90 ScafM SNP 0010.scaffold00043 127946 1 A T scaffold90 ScafM SNP 0010.scaffold00043 127950 1 G C scaffold90 ScafM SNP 0010.scaffold00043 127970 1 C T scaffold90 ScafM SNP 0010.scaffold00043 128010 1 G T scaffold90 ScafM SNP 0010.scaffold00043 128288 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128299 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 128335 1 A . scaffold90 ScafM SNP 0010.scaffold00043 128337 1 A G scaffold90 ScafM SNP 0010.scaffold00043 128346 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128348 1 C T scaffold90 ScafM SNP 0010.scaffold00043 128388 1 G T scaffold90 ScafM SNP 0010.scaffold00043 128413 1 C T scaffold90 ScafM SNP 0010.scaffold00043 128440 1 G T scaffold90 ScafM SNP 0010.scaffold00043 128446 1 C T scaffold90 ScafM SNP 0010.scaffold00043 128456 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 128470 1 T . scaffold90 ScafM SNP 0010.scaffold00043 128472 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 128497 5 ATTGT ..... scaffold90 ScafM SNP 0010.scaffold00043 128503 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128542 1 G A scaffold90 ScafM SNP 0010.scaffold00043 128565 1 A C scaffold90 ScafM SNP 0010.scaffold00043 128569 2 GA AT scaffold90 ScafM SNP 0010.scaffold00043 128576 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 128585 2 .. TA scaffold90 ScafM SNP 0010.scaffold00043 128592 1 G T scaffold90 ScafM SNP 0010.scaffold00043 128602 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128636 1 A T scaffold90 Both SNP 0010.scaffold00043 128664 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128742 1 T C scaffold90 ScafM SNP 0010.scaffold00043 128753 1 A G scaffold90 ScafM SNP 0010.scaffold00043 128766 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 128929 1 T . scaffold90 ScafM SNP 0010.scaffold00043 128951 1 A T scaffold90 ScafM SNP 0010.scaffold00043 128961 1 G A scaffold90 ScafM SNP 0010.scaffold00043 128966 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 128983 1 . A scaffold90 ScafM SNP 0010.scaffold00043 129006 1 C A scaffold90 ScafM SNP 0010.scaffold00043 129015 1 A G scaffold90 ScafM SNP 0010.scaffold00043 129019 1 T G scaffold90 ScafM SNP 0010.scaffold00043 129031 1 T C scaffold90 ScafM SNP 0010.scaffold00043 129044 1 G A scaffold90 ScafM SNP 0010.scaffold00043 129047 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 129053 1 A . scaffold90 ScafM SNP 0010.scaffold00043 129074 1 A G scaffold90 ScafM SNP 0010.scaffold00043 129079 1 G A scaffold90 ScafM SNP 0010.scaffold00043 129116 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129119 1 A T scaffold90 ScafM SNP 0010.scaffold00043 129129 2 AC TT scaffold90 ScafM INDEL 0010.scaffold00043 129142 2 .G AA scaffold90 ScafM SNP 0010.scaffold00043 129174 2 TA GG scaffold90 ScafM SNP 0010.scaffold00043 129183 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129185 1 A C scaffold90 ScafM SNP 0010.scaffold00043 129202 1 G T scaffold90 ScafM SNP 0010.scaffold00043 129204 1 G A scaffold90 ScafM SNP 0010.scaffold00043 129239 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129254 1 G T scaffold90 ScafM SNP 0010.scaffold00043 129256 2 AG CA scaffold90 ScafM INDEL 0010.scaffold00043 129286 1 . C scaffold90 ScafM SNP 0010.scaffold00043 129288 1 T A scaffold90 ScafM SNP 0010.scaffold00043 129295 1 T G scaffold90 ScafM SNP 0010.scaffold00043 129301 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 129314 26 ATATTGTTTGTGAAACCTCGGTAAAC .......................... scaffold90 ScafM SNP 0010.scaffold00043 129348 1 T G scaffold90 ScafM SNP 0010.scaffold00043 129364 1 A G scaffold90 ScafM SNP 0010.scaffold00043 129368 1 G A scaffold90 ScafM SNP 0010.scaffold00043 129374 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129378 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 129391 7 TCTCCAA ....... scaffold90 ScafM SNP 0010.scaffold00043 129415 1 G A scaffold90 ScafM SNP 0010.scaffold00043 129433 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129435 1 A G scaffold90 ScafM SNP 0010.scaffold00043 129504 1 A G scaffold90 ScafM SNP 0010.scaffold00043 129507 1 G T scaffold90 ScafM SNP 0010.scaffold00043 129532 1 T C scaffold90 ScafM SNP 0010.scaffold00043 129536 1 C G scaffold90 ScafM SNP 0010.scaffold00043 129542 1 C T scaffold90 ScafM SNP 0010.scaffold00043 129570 1 T C scaffold90 ScafM SNP 0010.scaffold00043 130244 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 130332 1 . T scaffold90 ScafM SNP 0010.scaffold00043 130338 2 AA TT scaffold90 Both SNP 0010.scaffold00043 132751 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 132929 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 132937 1 C G scaffold90 ScafM SNP 0010.scaffold00043 132955 1 G A scaffold90 ScafM SNP 0010.scaffold00043 132962 1 T A scaffold90 ScafM SNP 0010.scaffold00043 132996 1 T A scaffold90 Both SNP 0010.scaffold00043 133083 1 A G scaffold90 Both SNP 0010.scaffold00043 133148 1 T G scaffold90 Both SNP 0010.scaffold00043 133442 1 T G scaffold90 Both SNP 0010.scaffold00043 133694 1 A G scaffold90 Both SNP 0010.scaffold00043 133730 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 134206 8 ........ AAAAAAAA scaffold90 ScafM INDEL 0010.scaffold00043 134207 1 . A scaffold90 Both SNP 0010.scaffold00043 134269 1 C G scaffold90 Both SNP 0010.scaffold00043 134397 1 G A scaffold90 Both SNP 0010.scaffold00043 134446 1 T A scaffold90 Both SNP 0010.scaffold00043 134792 1 G A scaffold90 Both SNP 0010.scaffold00043 134902 1 T A scaffold90 Both SNP 0010.scaffold00043 135135 1 T C scaffold90 Both SNP 0010.scaffold00043 135187 1 T G scaffold90 Both SNP 0010.scaffold00043 135652 1 T G scaffold90 Both SNP 0010.scaffold00043 135661 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 135727 1 . T scaffold90 Both INDEL 0010.scaffold00043 136045 1 . C scaffold90 Both SNP 0010.scaffold00043 136196 1 G A scaffold90 Both SNP 0010.scaffold00043 136460 1 C T scaffold90 Both SNP 0010.scaffold00043 136504 1 C T scaffold90 Both SNP 0010.scaffold00043 136516 1 A C scaffold90 Both INDEL 0010.scaffold00043 136621 1 . T scaffold90 Both SNP 0010.scaffold00043 136813 1 T C scaffold90 Both SNP 0010.scaffold00043 136936 1 C T scaffold90 Both SNP 0010.scaffold00043 137052 1 C T scaffold90 Both SNP 0010.scaffold00043 137286 1 A G scaffold90 ScafM SNP 0010.scaffold00043 137912 1 G T scaffold90 ScafM SNP 0010.scaffold00043 137929 1 G A scaffold90 ScafM SNP 0010.scaffold00043 138124 1 A T scaffold90 ScafM SNP 0010.scaffold00043 138145 1 A T scaffold90 ReadM SNP 0010.scaffold00043 138349 1 T C - ReadM SNP 0010.scaffold00043 139707 1 C T - ReadM SNP 0010.scaffold00043 139915 1 G A - ReadM SNP 0010.scaffold00043 140220 1 C T - ReadM SNP 0010.scaffold00043 140386 1 A G - ReadM SNP 0010.scaffold00043 140412 1 T C - ReadM SNP 0010.scaffold00043 140470 1 G A - ReadM SNP 0010.scaffold00043 140484 1 C T - ReadM SNP 0010.scaffold00043 140543 1 T G - ReadM SNP 0010.scaffold00043 140659 1 T C - Both SNP 0010.scaffold00043 140794 1 A G scaffold90 ReadM SNP 0010.scaffold00043 140879 1 A T - ReadM SNP 0010.scaffold00043 141045 1 G A - Both SNP 0010.scaffold00043 141390 1 A C scaffold90 Both INDEL 0010.scaffold00043 141439 1 C . scaffold90 ScafM SNP 0010.scaffold00043 141445 1 C T scaffold90 Both SNP 0010.scaffold00043 141500 1 G A scaffold90 ScafM SNP 0010.scaffold00043 141539 1 T G scaffold90 Both SNP 0010.scaffold00043 141649 1 G A scaffold90 Both SNP 0010.scaffold00043 141821 1 A G scaffold90 Both SNP 0010.scaffold00043 142137 1 C T scaffold90 Both SNP 0010.scaffold00043 142157 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 142163 8 ........ CTATAAGC scaffold90 ReadM SNP 0010.scaffold00043 142479 1 T G - ReadM SNP 0010.scaffold00043 142675 1 T A - ReadM SNP 0010.scaffold00043 142701 1 T C - Both SNP 0010.scaffold00043 142758 1 G C scaffold90 Both SNP 0010.scaffold00043 142981 1 C T scaffold90 Both INDEL 0010.scaffold00043 142992 1 A . scaffold90 Both SNP 0010.scaffold00043 143064 1 G T scaffold90 Both SNP 0010.scaffold00043 143420 1 T C scaffold90 Both SNP 0010.scaffold00043 143502 1 C A scaffold90 Both SNP 0010.scaffold00043 143523 1 A G scaffold90 ScafM SNP 0010.scaffold00043 143669 1 T C scaffold90 Both SNP 0010.scaffold00043 143792 1 C T scaffold90 Both SNP 0010.scaffold00043 143872 1 T C scaffold90 Both SNP 0010.scaffold00043 143884 1 C T scaffold90 Both SNP 0010.scaffold00043 143996 1 T A scaffold90 Both SNP 0010.scaffold00043 144190 1 T C scaffold90 Both SNP 0010.scaffold00043 144205 1 T C scaffold90 Both SNP 0010.scaffold00043 144429 1 T G scaffold90 Both SNP 0010.scaffold00043 144527 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 144717 1 A . scaffold90 Both SNP 0010.scaffold00043 144899 1 C T scaffold90 Both SNP 0010.scaffold00043 144932 1 C A scaffold90 Both SNP 0010.scaffold00043 144975 1 T C scaffold90 Both INDEL 0010.scaffold00043 145311 1 T . scaffold90 Both SNP 0010.scaffold00043 145368 1 A T scaffold90 Both SNP 0010.scaffold00043 145414 1 G C scaffold90 Both SNP 0010.scaffold00043 145416 1 G A scaffold90 ScafM SNP 0010.scaffold00043 145579 1 A T scaffold90 ScafM SNP 0010.scaffold00043 145601 1 A T scaffold90 ScafM SNP 0010.scaffold00043 145634 1 A T scaffold90 ScafM SNP 0010.scaffold00043 145939 1 C T scaffold90 ScafM SNP 0010.scaffold00043 147056 1 A G scaffold90 ScafM SNP 0010.scaffold00043 147061 1 C T scaffold90 ScafM SNP 0010.scaffold00043 147077 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 147080 5 TTTCA ..... scaffold90 ScafM SNP 0010.scaffold00043 147100 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 147105 2 AT .. scaffold90 ScafM SNP 0010.scaffold00043 147109 1 T C scaffold90 ScafM SNP 0010.scaffold00043 147121 1 G A scaffold90 ScafM SNP 0010.scaffold00043 147130 1 T G scaffold90 ScafM SNP 0010.scaffold00043 147155 1 A G scaffold90 ScafM SNP 0010.scaffold00043 147163 1 A T scaffold90 ScafM SNP 0010.scaffold00043 147171 1 G C scaffold90 ScafM SNP 0010.scaffold00043 147193 1 T C scaffold90 ScafM SNP 0010.scaffold00043 147205 1 T G scaffold90 ScafM SNP 0010.scaffold00043 147335 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 147348 1 . A scaffold90 ScafM SNP 0010.scaffold00043 147353 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 147356 1 C . scaffold90 ScafM SNP 0010.scaffold00043 147361 1 A T scaffold90 ScafM SNP 0010.scaffold00043 147414 1 T G scaffold90 ScafM SNP 0010.scaffold00043 147422 1 C G scaffold90 ScafM SNP 0010.scaffold00043 147473 1 A C scaffold90 ScafM SNP 0010.scaffold00043 147477 2 CC TT scaffold90 ScafM SNP 0010.scaffold00043 147509 2 AA GT scaffold90 ScafM SNP 0010.scaffold00043 147569 1 C A scaffold90 ScafM SNP 0010.scaffold00043 147583 1 G A scaffold90 ScafM SNP 0010.scaffold00043 147611 1 G A scaffold90 ScafM SNP 0010.scaffold00043 147623 1 C T scaffold90 ScafM SNP 0010.scaffold00043 147666 1 A G scaffold90 ScafM SNP 0010.scaffold00043 147669 1 C T scaffold90 ScafM SNP 0010.scaffold00043 147691 1 T C scaffold90 ScafM SNP 0010.scaffold00043 147703 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 148189 2 CC .. scaffold90 ScafM SNP 0010.scaffold00043 148193 1 G T scaffold90 ScafM SNP 0010.scaffold00043 148224 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 148227 1 G . scaffold90 ScafM SNP 0010.scaffold00043 148233 1 A C scaffold90 ScafM SNP 0010.scaffold00043 148236 1 A C scaffold90 ReadM SNP 0010.scaffold00043 148692 1 G A - ReadM SNP 0010.scaffold00043 148706 1 T C - ReadM SNP 0010.scaffold00043 148711 1 G A - ScafM SNP 0010.scaffold00043 148773 1 G A scaffold90 ScafM SNP 0010.scaffold00043 148785 1 G A scaffold90 ScafM SNP 0010.scaffold00043 148806 1 G A scaffold90 ScafM SNP 0010.scaffold00043 148830 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 148837 1 . A scaffold90 ScafM SNP 0010.scaffold00043 148839 1 T A scaffold90 ScafM SNP 0010.scaffold00043 148852 1 G A scaffold90 ScafM SNP 0010.scaffold00043 148859 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 148865 1 A . scaffold90 ScafM SNP 0010.scaffold00043 148875 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 148899 4 .... TTTA scaffold90 ScafM SNP 0010.scaffold00043 148912 1 C A scaffold90 ReadM SNP 0010.scaffold00043 149175 1 G C - ReadM SNP 0010.scaffold00043 149233 1 C T - ReadM SNP 0010.scaffold00043 149244 1 T C - ScafM SNP 0010.scaffold00043 149377 1 T A scaffold90 ScafM SNP 0010.scaffold00043 149435 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 149455 1 . T scaffold90 ScafM SNP 0010.scaffold00043 149460 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 149487 1 T . scaffold90 ScafM SNP 0010.scaffold00043 149557 1 A G scaffold90 ScafM SNP 0010.scaffold00043 149578 1 A C scaffold90 ScafM SNP 0010.scaffold00043 149592 1 C A scaffold90 ScafM SNP 0010.scaffold00043 149604 1 A G scaffold90 ScafM SNP 0010.scaffold00043 149685 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 149702 1 T . scaffold90 ScafM SNP 0010.scaffold00043 149705 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 149739 3 ... TAA scaffold90 ScafM SNP 0010.scaffold00043 149797 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 149819 2 TT .. scaffold90 ReadM SNP 0010.scaffold00043 150364 1 T C - ReadM SNP 0010.scaffold00043 150449 1 A G - ReadM SNP 0010.scaffold00043 150486 1 A G - ScafM SNP 0010.scaffold00043 150772 1 C T scaffold90 ScafM SNP 0010.scaffold00043 150804 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 150862 1 . A scaffold90 ScafM SNP 0010.scaffold00043 151095 1 A G scaffold90 ReadM SNP 0010.scaffold00043 151832 1 C A - ScafM SNP 0010.scaffold00043 152716 1 T C scaffold90 ScafM SNP 0010.scaffold00043 152748 1 C T scaffold90 ScafM SNP 0010.scaffold00043 152799 1 C T scaffold90 ScafM SNP 0010.scaffold00043 152860 1 A T scaffold90 ScafM SNP 0010.scaffold00043 152885 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 152937 2 AC .. scaffold90 ScafM SNP 0010.scaffold00043 152940 1 A G scaffold90 ScafM SNP 0010.scaffold00043 152950 1 A T scaffold90 ScafM SNP 0010.scaffold00043 153063 1 T C scaffold90 ScafM SNP 0010.scaffold00043 153074 1 C T scaffold90 ReadM SNP 0010.scaffold00043 153196 1 G A - ReadM SNP 0010.scaffold00043 153250 1 A C - ReadM SNP 0010.scaffold00043 153337 1 G C - ReadM SNP 0010.scaffold00043 153341 1 A G - ReadM SNP 0010.scaffold00043 153493 1 G A - ReadM SNP 0010.scaffold00043 153533 1 T A - ScafM INDEL 0010.scaffold00043 153615 1 G . scaffold90 ScafM SNP 0010.scaffold00043 153647 1 T A scaffold90 ScafM SNP 0010.scaffold00043 153650 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 153651 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 153673 1 G A scaffold90 ScafM SNP 0010.scaffold00043 153692 1 C T scaffold90 ScafM SNP 0010.scaffold00043 153700 1 A G scaffold90 Both SNP 0010.scaffold00043 153728 1 G C scaffold90 Both SNP 0010.scaffold00043 153757 1 G C scaffold90 Both SNP 0010.scaffold00043 153779 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 153831 8 ........ GTCTAATC scaffold90 Both SNP 0010.scaffold00043 153875 1 A G scaffold90 Both SNP 0010.scaffold00043 153927 1 C G scaffold90 ScafM SNP 0010.scaffold00043 154004 1 A G scaffold90 ScafM SNP 0010.scaffold00043 154009 1 G A scaffold90 ScafM SNP 0010.scaffold00043 154303 1 G C scaffold90 ScafM SNP 0010.scaffold00043 154322 1 C G scaffold90 Both SNP 0010.scaffold00043 154551 1 G A scaffold90 Both SNP 0010.scaffold00043 154554 1 C T scaffold90 ScafM SNP 0010.scaffold00043 154577 1 T A scaffold90 ScafM SNP 0010.scaffold00043 154595 1 T C scaffold90 ScafM SNP 0010.scaffold00043 154613 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 154618 2 .G CA scaffold90 ScafM SNP 0010.scaffold00043 154622 2 GA AG scaffold90 ScafM SNP 0010.scaffold00043 154627 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 154874 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 154982 3 ACA ... scaffold90 ScafM SNP 0010.scaffold00043 155009 1 A C scaffold90 ScafM SNP 0010.scaffold00043 155050 1 T C scaffold90 ScafM SNP 0010.scaffold00043 155088 1 A T scaffold90 ScafM SNP 0010.scaffold00043 155118 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 155156 2 AA .. scaffold90 ScafM INDEL 0010.scaffold00043 155188 1 . T scaffold90 ScafM SNP 0010.scaffold00043 155292 1 G C scaffold90 ScafM SNP 0010.scaffold00043 155616 1 T G scaffold90 ScafM SNP 0010.scaffold00043 155623 1 A G scaffold90 ScafM SNP 0010.scaffold00043 155660 1 G A scaffold90 ScafM SNP 0010.scaffold00043 155715 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 155749 8 ........ GTGTAAGT scaffold90 ScafM INDEL 0010.scaffold00043 155814 2 .. AT scaffold90 ScafM INDEL 0010.scaffold00043 155820 1 T . scaffold90 ScafM SNP 0010.scaffold00043 155824 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 155832 1 . T scaffold90 ScafM SNP 0010.scaffold00043 155979 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 156011 1 T . scaffold90 ScafM SNP 0010.scaffold00043 156036 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 156056 1 . T scaffold90 ScafM SNP 0010.scaffold00043 156071 1 T A scaffold90 ScafM SNP 0010.scaffold00043 156175 1 A G scaffold90 ScafM SNP 0010.scaffold00043 156191 1 G A scaffold90 ScafM SNP 0010.scaffold00043 156215 1 A G scaffold90 ScafM SNP 0010.scaffold00043 156278 1 G A scaffold90 ReadM SNP 0010.scaffold00043 156487 1 T C - Both SNP 0010.scaffold00043 156814 1 G A scaffold90 ReadM SNP 0010.scaffold00043 156869 1 G A - ReadM SNP 0010.scaffold00043 156928 1 G A - ReadM SNP 0010.scaffold00043 156962 1 T C - ReadM SNP 0010.scaffold00043 156983 1 T G - ReadM SNP 0010.scaffold00043 157021 1 C A - Both SNP 0010.scaffold00043 157054 1 T C scaffold90 ReadM SNP 0010.scaffold00043 157253 1 T A - ReadM INDEL 0010.scaffold00043 157349 2 AT .. - ReadM SNP 0010.scaffold00043 157470 1 A G - ScafM INDEL 0010.scaffold00043 157717 4 TCTA .... scaffold90 ScafM INDEL 0010.scaffold00043 157908 1 T . scaffold90 Both SNP 0010.scaffold00043 157952 1 T C scaffold90 ScafM SNP 0010.scaffold00043 158032 1 A G scaffold90 ScafM SNP 0010.scaffold00043 158041 1 G A scaffold90 ScafM SNP 0010.scaffold00043 158475 1 T C scaffold90 ScafM SNP 0010.scaffold00043 158938 1 A T scaffold90 ScafM SNP 0010.scaffold00043 158954 1 G T scaffold90 ScafM SNP 0010.scaffold00043 158956 1 C T scaffold90 ScafM SNP 0010.scaffold00043 158965 1 A C scaffold90 ScafM SNP 0010.scaffold00043 158967 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 158998 5 ..... AACAA scaffold90 Both SNP 0010.scaffold00043 159027 1 T C scaffold90 Both SNP 0010.scaffold00043 159038 1 T A scaffold90 ScafM SNP 0010.scaffold00043 159167 1 G A scaffold90 Both SNP 0010.scaffold00043 159364 1 T C scaffold90 ReadM SNP 0010.scaffold00043 159473 1 C G - ScafM SNP 0010.scaffold00043 159604 1 G A scaffold90 ScafM SNP 0010.scaffold00043 159635 1 G A scaffold90 ScafM SNP 0010.scaffold00043 159944 1 A G scaffold90 ScafM SNP 0010.scaffold00043 159970 1 A T scaffold90 Both INDEL 0010.scaffold00043 159998 2 CT .. scaffold90 ScafM INDEL 0010.scaffold00043 160079 9 ......... AATAATAAA scaffold90 ScafM INDEL 0010.scaffold00043 160081 1 . A scaffold90 ScafM SNP 0010.scaffold00043 160112 1 T C scaffold90 ScafM SNP 0010.scaffold00043 160275 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 160290 1 A . scaffold90 Both SNP 0010.scaffold00043 160432 1 T C scaffold90 Both SNP 0010.scaffold00043 160434 1 A C scaffold90 Both SNP 0010.scaffold00043 160437 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 160665 12 ............ ACGACAACGACA scaffold90 ReadM SNP 0010.scaffold00043 160686 1 A G - Both SNP 0010.scaffold00043 160928 1 C T scaffold90 Both SNP 0010.scaffold00043 161035 1 C T scaffold90 Both SNP 0010.scaffold00043 161102 1 G A scaffold90 Both SNP 0010.scaffold00043 161104 1 G A scaffold90 Both SNP 0010.scaffold00043 161126 1 G T scaffold90 Both SNP 0010.scaffold00043 161146 1 A C scaffold90 Both SNP 0010.scaffold00043 161337 1 C A scaffold90 Both INDEL 0010.scaffold00043 161376 2 .. TA scaffold90 Both SNP 0010.scaffold00043 161407 1 T C scaffold90 Both SNP 0010.scaffold00043 161493 1 A G scaffold90 ScafM SNP 0010.scaffold00043 161517 2 CT TG scaffold90 ScafM SNP 0010.scaffold00043 161541 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 161568 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 161611 13 ............. GGCCATCATAAAT scaffold90 ScafM SNP 0010.scaffold00043 161630 1 G A scaffold90 ScafM SNP 0010.scaffold00043 161727 1 T C scaffold90 ScafM SNP 0010.scaffold00043 161733 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 161755 1 T . scaffold90 ScafM SNP 0010.scaffold00043 161807 1 G A scaffold90 ScafM SNP 0010.scaffold00043 161812 2 GG TT scaffold90 Both SNP 0010.scaffold00043 161839 1 G A scaffold90 Both SNP 0010.scaffold00043 161850 1 T A scaffold90 Both SNP 0010.scaffold00043 161971 1 C T scaffold90 Both SNP 0010.scaffold00043 161982 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 162046 7 ....... ATATTTC scaffold90 Both INDEL 0010.scaffold00043 162063 1 G . scaffold90 Both SNP 0010.scaffold00043 162091 1 T C scaffold90 ScafM SNP 0010.scaffold00043 162154 2 TG CA scaffold90 Both SNP 0010.scaffold00043 162176 1 C T scaffold90 Both SNP 0010.scaffold00043 162179 1 T G scaffold90 Both SNP 0010.scaffold00043 162370 1 T G scaffold90 Both INDEL 0010.scaffold00043 162410 1 T . scaffold90 ScafM SNP 0010.scaffold00043 162413 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 162433 1 A . scaffold90 ScafM INDEL 0010.scaffold00043 162435 1 . G scaffold90 Both SNP 0010.scaffold00043 162539 1 T C scaffold90 Both SNP 0010.scaffold00043 162613 1 T C scaffold90 Both SNP 0010.scaffold00043 162623 1 C A scaffold90 Both SNP 0010.scaffold00043 162646 1 A G scaffold90 Both SNP 0010.scaffold00043 162767 1 T G scaffold90 ScafM SNP 0010.scaffold00043 162898 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 162908 5 TACTC ..... scaffold90 Both SNP 0010.scaffold00043 163027 1 G C scaffold90 Both SNP 0010.scaffold00043 163056 1 A G scaffold90 ScafM SNP 0010.scaffold00043 163069 1 T C scaffold90 ScafM SNP 0010.scaffold00043 163071 1 A G scaffold90 ScafM SNP 0010.scaffold00043 163081 1 C T scaffold90 Both SNP 0010.scaffold00043 163103 1 C T scaffold90 Both SNP 0010.scaffold00043 163123 1 G A scaffold90 Both SNP 0010.scaffold00043 163157 1 C G scaffold90 ScafM SNP 0010.scaffold00043 163245 3 GCA TTG scaffold90 Both SNP 0010.scaffold00043 163268 1 G A scaffold90 Both SNP 0010.scaffold00043 163307 1 C T scaffold90 ScafM SNP 0010.scaffold00043 163531 1 T C scaffold90 Both SNP 0010.scaffold00043 163569 1 C G scaffold90 Both SNP 0010.scaffold00043 163623 1 G A scaffold90 Both SNP 0010.scaffold00043 163625 1 T C scaffold90 Both SNP 0010.scaffold00043 163816 1 T A scaffold90 Both SNP 0010.scaffold00043 163894 1 G A scaffold90 Both SNP 0010.scaffold00043 163944 1 T A scaffold90 Both SNP 0010.scaffold00043 163972 1 G A scaffold90 Both SNP 0010.scaffold00043 163991 1 G T scaffold90 Both SNP 0010.scaffold00043 164005 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 164110 5 GGGGG ..... scaffold90 ScafM INDEL 0010.scaffold00043 164150 3 GTA .AC scaffold90 ScafM SNP 0010.scaffold00043 164164 1 G A scaffold90 ScafM SNP 0010.scaffold00043 164216 1 T A scaffold90 Both SNP 0010.scaffold00043 164253 1 A C scaffold90 ScafM SNP 0010.scaffold00043 164258 2 GA TG scaffold90 Both SNP 0010.scaffold00043 164329 1 T C scaffold90 ScafM SNP 0010.scaffold00043 164363 1 T C scaffold90 ScafM SNP 0010.scaffold00043 164368 2 GA TG scaffold90 Both SNP 0010.scaffold00043 164452 1 C T scaffold90 Both SNP 0010.scaffold00043 164491 1 T C scaffold90 ScafM SNP 0010.scaffold00043 164538 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 164544 11 ........... ACATGATGCGC scaffold90 Both SNP 0010.scaffold00043 164553 1 A C scaffold90 Both INDEL 0010.scaffold00043 164575 1 A . scaffold90 Both SNP 0010.scaffold00043 164705 1 G A scaffold90 Both SNP 0010.scaffold00043 164752 1 T C scaffold90 Both SNP 0010.scaffold00043 164763 1 G T scaffold90 Both INDEL 0010.scaffold00043 164771 1 . T scaffold90 Both SNP 0010.scaffold00043 164813 1 A G scaffold90 Both SNP 0010.scaffold00043 164876 1 G A scaffold90 Both SNP 0010.scaffold00043 164929 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 164990 3 ... TTA scaffold90 ReadM INDEL 0010.scaffold00043 165010 1 . T - ScafM INDEL 0010.scaffold00043 165010 2 .C TA scaffold90 Both SNP 0010.scaffold00043 165074 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 165104 2 .. AA scaffold90 ScafM SNP 0010.scaffold00043 165106 1 G A scaffold90 ScafM SNP 0010.scaffold00043 165119 1 T C scaffold90 Both SNP 0010.scaffold00043 165221 1 A G scaffold90 Both SNP 0010.scaffold00043 165287 1 A T scaffold90 Both SNP 0010.scaffold00043 165302 1 A T scaffold90 Both SNP 0010.scaffold00043 165352 1 C T scaffold90 Both SNP 0010.scaffold00043 165374 1 A G scaffold90 Both SNP 0010.scaffold00043 165461 1 G T scaffold90 ScafM SNP 0010.scaffold00043 165470 1 T A scaffold90 ScafM SNP 0010.scaffold00043 165472 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 165493 3 ... GGG scaffold90 ScafM INDEL 0010.scaffold00043 165562 1 . G scaffold90 ScafM SNP 0010.scaffold00043 165569 1 C T scaffold90 ScafM SNP 0010.scaffold00043 165592 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 165605 7 TATATGT ....... scaffold90 ScafM SNP 0010.scaffold00043 165617 1 T G scaffold90 ScafM SNP 0010.scaffold00043 165628 1 G A scaffold90 ScafM SNP 0010.scaffold00043 165677 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 165688 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 165732 1 . A scaffold90 ScafM SNP 0010.scaffold00043 165736 1 T C scaffold90 ScafM SNP 0010.scaffold00043 165752 2 TC CT scaffold90 ScafM SNP 0010.scaffold00043 165755 1 A G scaffold90 Both SNP 0010.scaffold00043 165820 1 C A scaffold90 Both SNP 0010.scaffold00043 165913 1 G A scaffold90 ScafM SNP 0010.scaffold00043 165960 2 AA GT scaffold90 ScafM INDEL 0010.scaffold00043 165969 7 ....... TCACGAG scaffold90 ScafM SNP 0010.scaffold00043 166001 1 T C scaffold90 ScafM SNP 0010.scaffold00043 166005 1 T C scaffold90 ScafM SNP 0010.scaffold00043 166025 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 166036 6 ...... TTTTTT scaffold90 ScafM SNP 0010.scaffold00043 166038 1 C T scaffold90 Both INDEL 0010.scaffold00043 166111 1 . T scaffold90 Both SNP 0010.scaffold00043 166118 1 G C scaffold90 Both SNP 0010.scaffold00043 166317 1 G A scaffold90 ScafM SNP 0010.scaffold00043 166334 1 C T scaffold90 ScafM SNP 0010.scaffold00043 166345 1 G A scaffold90 ScafM SNP 0010.scaffold00043 166356 1 T C scaffold90 Both SNP 0010.scaffold00043 166365 1 A G scaffold90 Both SNP 0010.scaffold00043 166370 1 T C scaffold90 Both SNP 0010.scaffold00043 166461 1 G A scaffold90 Both SNP 0010.scaffold00043 166771 1 C T scaffold90 Both SNP 0010.scaffold00043 166790 1 G A scaffold90 ScafM SNP 0010.scaffold00043 166818 1 G T scaffold90 ScafM SNP 0010.scaffold00043 166828 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 166837 3 ... GAA scaffold90 Both SNP 0010.scaffold00043 166927 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 167186 3 ..G CAT scaffold90 ScafM SNP 0010.scaffold00043 167232 1 T G scaffold90 ScafM SNP 0010.scaffold00043 167239 1 T A scaffold90 ScafM SNP 0010.scaffold00043 167251 1 A G scaffold90 ScafM SNP 0010.scaffold00043 167331 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 167341 1 . C scaffold90 ScafM INDEL 0010.scaffold00043 167355 2 .. TA scaffold90 ScafM SNP 0010.scaffold00043 167362 1 T A scaffold90 ScafM SNP 0010.scaffold00043 167378 1 A C scaffold90 ScafM SNP 0010.scaffold00043 167401 1 C G scaffold90 ScafM SNP 0010.scaffold00043 167426 1 T G scaffold90 ScafM SNP 0010.scaffold00043 167473 1 T C scaffold90 ScafM SNP 0010.scaffold00043 167484 1 T G scaffold90 ScafM SNP 0010.scaffold00043 167493 1 T C scaffold90 ScafM SNP 0010.scaffold00043 167495 1 G A scaffold90 ScafM SNP 0010.scaffold00043 167500 1 C T scaffold90 ScafM SNP 0010.scaffold00043 167932 1 C G scaffold90 ScafM SNP 0010.scaffold00043 167937 1 C T scaffold90 ScafM SNP 0010.scaffold00043 167947 1 T C scaffold90 ScafM SNP 0010.scaffold00043 167954 1 G A scaffold90 ScafM SNP 0010.scaffold00043 168007 1 T C scaffold90 ScafM SNP 0010.scaffold00043 168045 1 A T scaffold90 ScafM SNP 0010.scaffold00043 168058 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 168145 19 ................... GTGACATGACATTTGTATT scaffold90 ScafM INDEL 0010.scaffold00043 168147 3 ... TTC scaffold90 ScafM INDEL 0010.scaffold00043 168153 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 168171 22 ...................... ATTATATGTAGCTGAGTAGCTC scaffold90 ScafM INDEL 0010.scaffold00043 168174 6 ...... AAATAT scaffold90 ScafM INDEL 0010.scaffold00043 168178 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 168179 1 . C scaffold90 ScafM SNP 0010.scaffold00043 168182 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 168184 2 .. AA scaffold90 ScafM INDEL 0010.scaffold00043 168185 3 ..T AAC scaffold90 ScafM INDEL 0010.scaffold00043 168219 2 .. CC scaffold90 ScafM INDEL 0010.scaffold00043 168226 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 168247 2 GA .C scaffold90 ScafM INDEL 0010.scaffold00043 168275 1 C . scaffold90 ScafM SNP 0010.scaffold00043 168279 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 168289 1 C . scaffold90 ScafM INDEL 0010.scaffold00043 168291 4 CCAA ..GG scaffold90 ScafM INDEL 0010.scaffold00043 168301 2 AT .G scaffold90 ScafM SNP 0010.scaffold00043 168304 1 A G scaffold90 ScafM SNP 0010.scaffold00043 168333 1 T A scaffold90 ScafM SNP 0010.scaffold00043 168341 1 G A scaffold90 ScafM SNP 0010.scaffold00043 168544 1 C T scaffold90 ScafM SNP 0010.scaffold00043 168571 1 A G scaffold90 ScafM SNP 0010.scaffold00043 168577 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 168583 1 . G scaffold90 ScafM SNP 0010.scaffold00043 168591 1 A G scaffold90 ScafM SNP 0010.scaffold00043 168605 1 G A scaffold90 ScafM SNP 0010.scaffold00043 168616 1 T C scaffold90 ScafM SNP 0010.scaffold00043 168623 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 168632 4 AACT .... scaffold90 ScafM INDEL 0010.scaffold00043 168638 3 ACA ... scaffold90 ScafM INDEL 0010.scaffold00043 168655 1 T . scaffold90 ScafM SNP 0010.scaffold00043 168660 1 T A scaffold90 ScafM SNP 0010.scaffold00043 168676 1 G C scaffold90 ScafM SNP 0010.scaffold00043 168680 1 C T scaffold90 ScafM SNP 0010.scaffold00043 168682 1 A G scaffold90 ScafM SNP 0010.scaffold00043 168689 1 A G scaffold90 ScafM SNP 0010.scaffold00043 168730 2 CT GC scaffold90 ScafM SNP 0010.scaffold00043 168738 1 T C scaffold90 ScafM SNP 0010.scaffold00043 169099 1 C A scaffold90 ScafM SNP 0010.scaffold00043 169103 2 TA CG scaffold90 ScafM SNP 0010.scaffold00043 169119 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169121 1 A G scaffold90 ScafM SNP 0010.scaffold00043 169155 1 A G scaffold90 ScafM SNP 0010.scaffold00043 169161 1 G A scaffold90 ScafM SNP 0010.scaffold00043 169180 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 169186 5 ..... TCTTT scaffold90 ScafM SNP 0010.scaffold00043 169192 1 A T scaffold90 ScafM SNP 0010.scaffold00043 169202 1 G T scaffold90 ScafM SNP 0010.scaffold00043 169244 1 T A scaffold90 ScafM SNP 0010.scaffold00043 169249 2 GA AG scaffold90 ScafM SNP 0010.scaffold00043 169255 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169268 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 169283 1 . T scaffold90 ScafM SNP 0010.scaffold00043 169288 7 CAAAAAA TTGTCCC scaffold90 ScafM INDEL 0010.scaffold00043 169295 1 . C scaffold90 ScafM SNP 0010.scaffold00043 169298 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 169300 6 ...... GGACTA scaffold90 ScafM INDEL 0010.scaffold00043 169301 2 .. GG scaffold90 ScafM SNP 0010.scaffold00043 169343 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169374 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 169375 1 . C scaffold90 ScafM SNP 0010.scaffold00043 169748 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169756 1 T C scaffold90 ScafM SNP 0010.scaffold00043 169761 1 C A scaffold90 ScafM SNP 0010.scaffold00043 169774 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169783 1 C T scaffold90 ScafM SNP 0010.scaffold00043 169787 1 A G scaffold90 ScafM SNP 0010.scaffold00043 169796 1 T C scaffold90 Both SNP 0010.scaffold00043 169831 1 A T scaffold90 Both SNP 0010.scaffold00043 169866 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 169913 7 ACTTGTT ....... scaffold90 ScafM INDEL 0010.scaffold00043 169926 3 TAG ... scaffold90 ScafM SNP 0010.scaffold00043 169931 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 169947 9 ATGTGGACA ......... scaffold90 ScafM INDEL 0010.scaffold00043 169958 4 GTAG .... scaffold90 Both SNP 0010.scaffold00043 170002 1 A G scaffold90 Both SNP 0010.scaffold00043 170048 1 A T scaffold90 ScafM SNP 0010.scaffold00043 170110 1 T A scaffold90 ScafM SNP 0010.scaffold00043 170116 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 170122 4 .... TATA scaffold90 ScafM SNP 0010.scaffold00043 170229 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 170265 3 ... TAC scaffold90 ScafM INDEL 0010.scaffold00043 170284 1 . A scaffold90 Both SNP 0010.scaffold00043 170355 1 C T scaffold90 Both SNP 0010.scaffold00043 170363 1 G A scaffold90 Both SNP 0010.scaffold00043 170449 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 170478 8 ........ TCTAATAT scaffold90 ScafM SNP 0010.scaffold00043 170497 1 A G scaffold90 ScafM SNP 0010.scaffold00043 170509 1 A C scaffold90 ScafM SNP 0010.scaffold00043 170525 1 A T scaffold90 ScafM SNP 0010.scaffold00043 170529 1 A C scaffold90 ScafM SNP 0010.scaffold00043 170532 1 C T scaffold90 ScafM SNP 0010.scaffold00043 170534 1 C T scaffold90 ScafM SNP 0010.scaffold00043 170573 1 C T scaffold90 ScafM SNP 0010.scaffold00043 170587 1 T C scaffold90 Both INDEL 0010.scaffold00043 170650 3 ... TTT scaffold90 Both SNP 0010.scaffold00043 170699 1 G A scaffold90 Both SNP 0010.scaffold00043 170766 1 T A scaffold90 Both SNP 0010.scaffold00043 170858 1 A T scaffold90 ReadM SNP 0010.scaffold00043 171439 1 T C - ReadM SNP 0010.scaffold00043 171486 1 T A - ReadM SNP 0010.scaffold00043 171500 1 T C - ScafM SNP 0010.scaffold00043 176616 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 176678 3 GTT ... scaffold90 ScafM SNP 0010.scaffold00043 176682 1 C G scaffold90 ScafM SNP 0010.scaffold00043 176817 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 176919 1 A . scaffold90 ScafM SNP 0010.scaffold00043 177123 1 G A scaffold90 ScafM SNP 0010.scaffold00043 177172 1 C T scaffold90 Both SNP 0010.scaffold00043 177257 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 177350 3 TTT ... scaffold90 ScafM SNP 0010.scaffold00043 177365 1 A C scaffold90 Both SNP 0010.scaffold00043 177523 1 C A scaffold90 Both SNP 0010.scaffold00043 177547 1 C T scaffold90 Both SNP 0010.scaffold00043 177627 1 G A scaffold90 ReadM SNP 0010.scaffold00043 177676 1 T C - ReadM SNP 0010.scaffold00043 177722 1 C T - Both SNP 0010.scaffold00043 177778 1 C T scaffold90 Both SNP 0010.scaffold00043 177818 1 T C scaffold90 Both SNP 0010.scaffold00043 177828 1 A T scaffold90 Both SNP 0010.scaffold00043 177834 1 C T scaffold90 ScafM SNP 0010.scaffold00043 177894 1 T G scaffold90 ScafM SNP 0010.scaffold00043 177904 1 T C scaffold90 ReadM SNP 0010.scaffold00043 177957 1 T A - ReadM SNP 0010.scaffold00043 177968 1 T C - Both SNP 0010.scaffold00043 178150 1 T C scaffold90 Both SNP 0010.scaffold00043 178185 1 A G scaffold90 Both SNP 0010.scaffold00043 178190 1 T A scaffold90 Both INDEL 0010.scaffold00043 178262 2 TT .. scaffold90 Both SNP 0010.scaffold00043 178860 1 G C scaffold90 Both SNP 0010.scaffold00043 178927 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 178961 3 ..G ATA scaffold90 ScafM INDEL 0010.scaffold00043 179060 2 TT .. scaffold90 ScafM SNP 0010.scaffold00043 179063 1 T C scaffold90 Both SNP 0010.scaffold00043 179091 1 A G scaffold90 Both SNP 0010.scaffold00043 179116 1 C T scaffold90 Both SNP 0010.scaffold00043 179171 1 A C scaffold90 Both SNP 0010.scaffold00043 179270 1 A G scaffold90 Both SNP 0010.scaffold00043 179318 1 A G scaffold90 Both SNP 0010.scaffold00043 179375 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 179562 3 GTC ... scaffold90 ScafM SNP 0010.scaffold00043 179610 1 T A scaffold90 ScafM SNP 0010.scaffold00043 179710 1 T C scaffold90 ScafM SNP 0010.scaffold00043 182194 1 C T scaffold90 ScafM SNP 0010.scaffold00043 182198 1 A C scaffold90 ScafM SNP 0010.scaffold00043 182204 1 T A scaffold90 ScafM SNP 0010.scaffold00043 182218 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 182225 2 .. AC scaffold90 ScafM SNP 0010.scaffold00043 182229 1 T A scaffold90 ScafM SNP 0010.scaffold00043 182244 1 C T scaffold90 ScafM SNP 0010.scaffold00043 182267 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 182288 2 .. AT scaffold90 ScafM SNP 0010.scaffold00043 182360 1 T G scaffold90 ScafM SNP 0010.scaffold00043 182366 1 A G scaffold90 ScafM SNP 0010.scaffold00043 182379 1 A G scaffold90 ScafM SNP 0010.scaffold00043 182381 1 A T scaffold90 ScafM SNP 0010.scaffold00043 182394 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 182413 1 A . scaffold90 ScafM SNP 0010.scaffold00043 182430 1 G C scaffold90 ScafM INDEL 0010.scaffold00043 182437 4 CTAG .... scaffold90 ScafM INDEL 0010.scaffold00043 182467 5 TCAAA ..... scaffold90 ScafM SNP 0010.scaffold00043 182499 2 TG CC scaffold90 ScafM SNP 0010.scaffold00043 182508 1 T A scaffold90 ScafM SNP 0010.scaffold00043 182548 1 A G scaffold90 ScafM SNP 0010.scaffold00043 182985 1 A G scaffold90 ScafM SNP 0010.scaffold00043 182993 1 G T scaffold90 ScafM SNP 0010.scaffold00043 182995 1 A G scaffold90 ScafM SNP 0010.scaffold00043 182999 1 A C scaffold90 ScafM SNP 0010.scaffold00043 183041 1 T A scaffold90 ScafM SNP 0010.scaffold00043 183050 1 G A scaffold90 ScafM SNP 0010.scaffold00043 183056 1 C T scaffold90 ScafM SNP 0010.scaffold00043 183069 1 G C scaffold90 ScafM SNP 0010.scaffold00043 183113 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183118 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 183131 1 . C scaffold90 ScafM SNP 0010.scaffold00043 183148 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183153 1 A T scaffold90 ScafM SNP 0010.scaffold00043 183159 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 183171 1 T . scaffold90 ScafM SNP 0010.scaffold00043 183180 1 C T scaffold90 ScafM SNP 0010.scaffold00043 183190 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 183196 2 .C TT scaffold90 ScafM SNP 0010.scaffold00043 183203 1 A G scaffold90 ScafM SNP 0010.scaffold00043 183209 1 C T scaffold90 ScafM SNP 0010.scaffold00043 183213 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183226 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 183247 1 . G scaffold90 ScafM SNP 0010.scaffold00043 183249 1 G C scaffold90 ScafM SNP 0010.scaffold00043 183253 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 183255 7 ....... TTAATTT scaffold90 ScafM INDEL 0010.scaffold00043 183309 1 . A scaffold90 ScafM SNP 0010.scaffold00043 183316 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183324 1 C G scaffold90 ScafM SNP 0010.scaffold00043 183328 1 T G scaffold90 ScafM SNP 0010.scaffold00043 183345 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183349 1 T C scaffold90 ScafM SNP 0010.scaffold00043 183367 2 TT CA scaffold90 ScafM INDEL 0010.scaffold00043 183389 2 .. TT scaffold90 ScafM SNP 0010.scaffold00043 183391 1 C G scaffold90 ScafM SNP 0010.scaffold00043 183394 2 CC TA scaffold90 ScafM SNP 0010.scaffold00043 183398 1 A C scaffold90 ScafM SNP 0010.scaffold00043 183401 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 183438 2 .. CT scaffold90 Both SNP 0010.scaffold00043 183467 1 G A scaffold90 Both INDEL 0010.scaffold00043 183483 1 . C scaffold90 Both SNP 0010.scaffold00043 183536 1 G A scaffold90 ScafM SNP 0010.scaffold00043 183581 1 A G scaffold90 ScafM SNP 0010.scaffold00043 183588 1 T A scaffold90 ScafM SNP 0010.scaffold00043 183592 1 T G scaffold90 ScafM SNP 0010.scaffold00043 183614 1 C A scaffold90 ScafM SNP 0010.scaffold00043 183624 1 G A scaffold90 ScafM SNP 0010.scaffold00043 183638 1 C T scaffold90 ScafM SNP 0010.scaffold00043 183645 1 T A scaffold90 ScafM SNP 0010.scaffold00043 183758 1 A G scaffold90 Both SNP 0010.scaffold00043 184003 1 A T scaffold90 Both SNP 0010.scaffold00043 184056 1 G A scaffold90 ReadM SNP 0010.scaffold00043 184144 1 G A - ReadM SNP 0010.scaffold00043 184219 1 C T - Both SNP 0010.scaffold00043 184336 1 A T scaffold90 ScafM SNP 0010.scaffold00043 184907 1 T A scaffold90 ScafM SNP 0010.scaffold00043 184950 2 AA GG scaffold90 ScafM SNP 0010.scaffold00043 184957 2 GC AT scaffold90 ScafM SNP 0010.scaffold00043 185010 1 C A scaffold90 ScafM SNP 0010.scaffold00043 185021 1 C A scaffold90 ScafM SNP 0010.scaffold00043 185029 1 A C scaffold90 ScafM SNP 0010.scaffold00043 185056 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 185082 2 .. CG scaffold90 ScafM INDEL 0010.scaffold00043 185083 2 .. AC scaffold90 ScafM SNP 0010.scaffold00043 185164 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 185197 3 TAT ... scaffold90 ScafM SNP 0010.scaffold00043 185327 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 185402 2 .. CT scaffold90 ScafM SNP 0010.scaffold00043 185442 1 C T scaffold90 ScafM SNP 0010.scaffold00043 185515 1 C T scaffold90 ScafM SNP 0010.scaffold00043 185823 1 C A scaffold90 ScafM SNP 0010.scaffold00043 185851 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 185936 3 ... AAT scaffold90 ScafM INDEL 0010.scaffold00043 185959 4 .... CGGC scaffold90 ScafM SNP 0010.scaffold00043 185982 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 186098 1 . G scaffold90 ScafM INDEL 0010.scaffold00043 186101 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 186106 1 . T scaffold90 ScafM SNP 0010.scaffold00043 186130 1 A G scaffold90 ScafM SNP 0010.scaffold00043 186767 1 G A scaffold90 ScafM SNP 0010.scaffold00043 186803 1 A T scaffold90 ScafM SNP 0010.scaffold00043 186850 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 186884 40 ........................................ ATTTCTTTCAAAAAAAAAAAAAAAAAAGGAACATTAGATG scaffold90 ScafM SNP 0010.scaffold00043 187586 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 187588 3 TAA ... scaffold90 ScafM INDEL 0010.scaffold00043 187598 1 T . scaffold90 ReadM INDEL 0010.scaffold00043 189134 2 .. TT - ReadM SNP 0010.scaffold00043 189143 1 A G - ReadM SNP 0010.scaffold00043 189238 1 C T - ReadM SNP 0010.scaffold00043 189247 1 A G - ScafM SNP 0010.scaffold00043 190574 1 C T scaffold7094 ScafM SNP 0010.scaffold00043 190583 1 A G scaffold7094 ScafM SNP 0010.scaffold00043 190594 1 G A scaffold7094 ScafM INDEL 0010.scaffold00043 190626 1 A . scaffold7094 ScafM SNP 0010.scaffold00043 190636 1 C A scaffold7094 ScafM SNP 0010.scaffold00043 190679 1 C A scaffold7094 ScafM SNP 0010.scaffold00043 190737 1 G T scaffold7094 ScafM SNP 0010.scaffold00043 190822 1 G A scaffold7094 ScafM SNP 0010.scaffold00043 190872 1 C G scaffold7094 ScafM INDEL 0010.scaffold00043 190920 1 . T scaffold7094 ScafM SNP 0010.scaffold00043 190926 2 CA AT scaffold7094 ScafM SNP 0010.scaffold00043 190963 1 A C scaffold7094 ScafM SNP 0010.scaffold00043 190982 1 G T scaffold7094 ScafM SNP 0010.scaffold00043 191104 1 G A scaffold7094 ScafM INDEL 0010.scaffold00043 191125 2 CT .. scaffold7094 ScafM SNP 0010.scaffold00043 191129 1 T G scaffold7094 ScafM SNP 0010.scaffold00043 191149 1 G A scaffold7094 ScafM SNP 0010.scaffold00043 191166 1 T C scaffold7094 ScafM INDEL 0010.scaffold00043 191209 4 .... AATG scaffold7094 ScafM INDEL 0010.scaffold00043 191211 1 . C scaffold7094 ScafM INDEL 0010.scaffold00043 191212 2 .. CA scaffold7094 ScafM SNP 0010.scaffold00043 191219 1 T G scaffold7094 ScafM INDEL 0010.scaffold00043 191243 2 .. GA scaffold7094 ScafM SNP 0010.scaffold00043 191253 1 A G scaffold7094 ScafM SNP 0010.scaffold00043 191261 1 T G scaffold7094 ScafM SNP 0010.scaffold00043 205886 1 G A scaffold90 ScafM SNP 0010.scaffold00043 205889 1 A T scaffold90 ScafM SNP 0010.scaffold00043 205921 1 A G scaffold90 ScafM SNP 0010.scaffold00043 205987 1 A C scaffold90 ScafM SNP 0010.scaffold00043 206002 1 T C scaffold90 ScafM SNP 0010.scaffold00043 206038 1 T C scaffold90 ScafM SNP 0010.scaffold00043 206052 1 G A scaffold90 ScafM SNP 0010.scaffold00043 206094 1 A G scaffold90 ScafM SNP 0010.scaffold00043 206194 1 T C scaffold90 ScafM SNP 0010.scaffold00043 206359 1 A G scaffold90 ScafM SNP 0010.scaffold00043 206363 1 G C scaffold90 ScafM SNP 0010.scaffold00043 206381 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 206391 3 ... AAT scaffold90 ScafM SNP 0010.scaffold00043 206887 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 206901 1 . A scaffold90 ScafM SNP 0010.scaffold00043 206915 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 206934 6 TATACA ...... scaffold90 ScafM SNP 0010.scaffold00043 206942 1 T G scaffold90 ScafM SNP 0010.scaffold00043 207001 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 207008 4 TTAG .... scaffold90 ScafM SNP 0010.scaffold00043 207016 1 C T scaffold90 ScafM SNP 0010.scaffold00043 207021 1 T G scaffold90 ScafM SNP 0010.scaffold00043 207092 1 C A scaffold90 ScafM SNP 0010.scaffold00043 207105 1 T C scaffold90 ScafM SNP 0010.scaffold00043 207114 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 207155 4 TCTT .... scaffold90 ScafM SNP 0010.scaffold00043 208953 1 G C scaffold90 ScafM SNP 0010.scaffold00043 208989 1 T C scaffold90 ScafM SNP 0010.scaffold00043 209024 1 C T scaffold90 ScafM SNP 0010.scaffold00043 209045 1 A G scaffold90 ScafM SNP 0010.scaffold00043 209048 1 T A scaffold90 ScafM SNP 0010.scaffold00043 209078 1 T C scaffold90 ScafM SNP 0010.scaffold00043 209089 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209096 1 A G scaffold90 ScafM SNP 0010.scaffold00043 209126 1 A C scaffold90 ScafM SNP 0010.scaffold00043 209144 1 T A scaffold90 ScafM SNP 0010.scaffold00043 209155 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209163 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 209202 3 AAA ... scaffold90 ScafM INDEL 0010.scaffold00043 209245 1 C . scaffold90 ScafM SNP 0010.scaffold00043 209270 1 A G scaffold90 ReadM SNP 0010.scaffold00043 209362 1 A G - ScafM INDEL 0010.scaffold00043 209405 2 TG .. scaffold90 ScafM INDEL 0010.scaffold00043 209415 1 . T scaffold90 ScafM SNP 0010.scaffold00043 209447 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209465 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 209485 1 G . scaffold90 ScafM SNP 0010.scaffold00043 209491 1 C G scaffold90 ScafM SNP 0010.scaffold00043 209498 1 T C scaffold90 ScafM SNP 0010.scaffold00043 209552 1 A C scaffold90 ScafM SNP 0010.scaffold00043 209561 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209571 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209585 3 GAA TCG scaffold90 ScafM SNP 0010.scaffold00043 209600 1 T C scaffold90 ScafM SNP 0010.scaffold00043 209603 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209639 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209647 1 T A scaffold90 ScafM SNP 0010.scaffold00043 209693 1 C T scaffold90 ScafM SNP 0010.scaffold00043 209695 1 T C scaffold90 Both SNP 0010.scaffold00043 209782 1 T A scaffold90 Both SNP 0010.scaffold00043 209798 1 A G scaffold90 Both INDEL 0010.scaffold00043 209819 1 T . scaffold90 ScafM SNP 0010.scaffold00043 209855 1 C A scaffold90 ScafM SNP 0010.scaffold00043 209886 2 CT AG scaffold90 ScafM SNP 0010.scaffold00043 209898 1 C A scaffold90 ScafM SNP 0010.scaffold00043 209902 1 T C scaffold90 ScafM SNP 0010.scaffold00043 209910 1 G A scaffold90 ScafM SNP 0010.scaffold00043 209926 1 C A scaffold90 ScafM SNP 0010.scaffold00043 209943 1 A T scaffold90 ScafM SNP 0010.scaffold00043 209946 1 C T scaffold90 ScafM SNP 0010.scaffold00043 209969 1 T C scaffold90 ScafM SNP 0010.scaffold00043 210000 1 G A scaffold90 ScafM SNP 0010.scaffold00043 210005 1 A G scaffold90 ScafM SNP 0010.scaffold00043 210079 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 210182 5 TCCGG ..... scaffold90 ScafM INDEL 0010.scaffold00043 210218 1 . A scaffold90 ScafM SNP 0010.scaffold00043 210220 1 T A scaffold90 ScafM SNP 0010.scaffold00043 210262 1 G A scaffold90 ScafM SNP 0010.scaffold00043 210264 1 G A scaffold90 ScafM SNP 0010.scaffold00043 210297 1 A C scaffold90 ScafM SNP 0010.scaffold00043 210327 1 A C scaffold90 ScafM SNP 0010.scaffold00043 210348 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 210365 1 T . scaffold90 ScafM SNP 0010.scaffold00043 210389 1 G A scaffold90 ScafM SNP 0010.scaffold00043 210409 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 210424 1 . G scaffold90 ScafM SNP 0010.scaffold00043 210435 1 T A scaffold90 ReadM SNP 0010.scaffold00043 211924 1 T A - ScafM INDEL 0010.scaffold00043 212080 3 AAA ... scaffold90 ScafM SNP 0010.scaffold00043 212171 1 G C scaffold90 ScafM SNP 0010.scaffold00043 212192 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 212198 7 ....... TTATAAT scaffold90 ScafM SNP 0010.scaffold00043 212211 1 C T scaffold90 ScafM SNP 0010.scaffold00043 212239 1 A G scaffold90 ScafM SNP 0010.scaffold00043 212251 1 G A scaffold90 ScafM SNP 0010.scaffold00043 212280 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 212331 1 . T scaffold90 ScafM SNP 0010.scaffold00043 212398 1 G A scaffold90 ScafM SNP 0010.scaffold00043 212502 1 G A scaffold90 ScafM SNP 0010.scaffold00043 212531 1 G T scaffold90 ScafM SNP 0010.scaffold00043 212537 1 T A scaffold90 ScafM SNP 0010.scaffold00043 212543 1 G C scaffold90 ScafM SNP 0010.scaffold00043 212550 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 212597 2 .. AG scaffold90 ScafM SNP 0010.scaffold00043 212608 1 T C scaffold90 ScafM SNP 0010.scaffold00043 212615 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 212639 1 . G scaffold90 ScafM SNP 0010.scaffold00043 212642 2 TA AT scaffold90 ScafM INDEL 0010.scaffold00043 213591 1 . T scaffold90 ScafM SNP 0010.scaffold00043 213593 2 GA TT scaffold90 ReadM SNP 0010.scaffold00043 215809 1 G A - Both INDEL 0010.scaffold00043 220073 1 . C scaffold90 ScafM SNP 0010.scaffold00043 220075 1 C T scaffold90 Both SNP 0010.scaffold00043 220084 1 A G scaffold90 Both SNP 0010.scaffold00043 220147 1 T C scaffold90 Both SNP 0010.scaffold00043 220171 1 T C scaffold90 Both SNP 0010.scaffold00043 220304 1 G A scaffold90 Both SNP 0010.scaffold00043 220371 1 T G scaffold90 Both SNP 0010.scaffold00043 220390 1 G C scaffold90 ScafM SNP 0010.scaffold00043 220415 1 A G scaffold90 ReadM SNP 0010.scaffold00043 220665 1 G A - ReadM SNP 0010.scaffold00043 220690 1 C T - ReadM SNP 0010.scaffold00043 220979 1 A T - ReadM SNP 0010.scaffold00043 221022 1 T A - ReadM SNP 0010.scaffold00043 221178 1 C T - ReadM SNP 0010.scaffold00043 221206 1 T G - ReadM SNP 0010.scaffold00043 221227 1 T A - ReadM SNP 0010.scaffold00043 221287 1 G C - ReadM SNP 0010.scaffold00043 221373 1 A C - ReadM SNP 0010.scaffold00043 221375 1 T C - ReadM SNP 0010.scaffold00043 221396 1 C T - ReadM SNP 0010.scaffold00043 221400 1 G A - ReadM SNP 0010.scaffold00043 221542 1 C T - ReadM SNP 0010.scaffold00043 221571 1 G A - ReadM SNP 0010.scaffold00043 221574 1 A C - ReadM SNP 0010.scaffold00043 221776 1 T G - ReadM SNP 0010.scaffold00043 221789 1 G A - ReadM SNP 0010.scaffold00043 221822 1 A G - ReadM SNP 0010.scaffold00043 221868 1 G A - ReadM SNP 0010.scaffold00043 221970 1 C T - ReadM SNP 0010.scaffold00043 222051 1 T G - ReadM SNP 0010.scaffold00043 222181 1 G A - ReadM SNP 0010.scaffold00043 222262 1 A C - ReadM SNP 0010.scaffold00043 222389 1 A G - ReadM SNP 0010.scaffold00043 222420 1 A G - ReadM SNP 0010.scaffold00043 222496 1 G T - ScafM INDEL 0010.scaffold00043 222496 2 GA .. scaffold90 ScafM SNP 0010.scaffold00043 222499 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 222939 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 223139 1 T . scaffold12660 ScafM SNP 0010.scaffold00043 223145 1 T C scaffold12660 ScafM SNP 0010.scaffold00043 223156 1 G A scaffold12660 ScafM SNP 0010.scaffold00043 223164 1 C T scaffold12660 ReadM SNP 0010.scaffold00043 223627 1 C T - ReadM SNP 0010.scaffold00043 224007 1 A G - ScafM SNP 0010.scaffold00043 236338 1 A G scaffold12660 ScafM SNP 0010.scaffold00043 236373 1 A G scaffold12660 ScafM INDEL 0010.scaffold00043 236402 3 ... AAA scaffold12660 ScafM SNP 0010.scaffold00043 236891 1 A T scaffold90 ScafM SNP 0010.scaffold00043 236916 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 237000 1 . T scaffold90 ScafM SNP 0010.scaffold00043 237053 1 A G scaffold90 ScafM SNP 0010.scaffold00043 237081 1 A T scaffold90 ScafM SNP 0010.scaffold00043 237084 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 237185 2 .. CT scaffold90 ReadM SNP 0010.scaffold00043 237286 1 A G - ReadM SNP 0010.scaffold00043 237300 1 A G - Both SNP 0010.scaffold00043 237479 1 A G scaffold90 Both SNP 0010.scaffold00043 237495 1 A T scaffold90 Both INDEL 0010.scaffold00043 237654 1 . A scaffold90 ScafM SNP 0010.scaffold00043 237667 2 GA AC scaffold90 ScafM SNP 0010.scaffold00043 237687 1 A C scaffold90 Both INDEL 0010.scaffold00043 237733 3 ... CTC scaffold90 Both SNP 0010.scaffold00043 237862 1 C G scaffold90 ReadM SNP 0010.scaffold00043 237884 1 A C - Both SNP 0010.scaffold00043 238027 1 T C scaffold90 ScafM SNP 0010.scaffold00043 238146 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238160 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238164 1 C T scaffold90 ScafM SNP 0010.scaffold00043 238175 1 C T scaffold90 ScafM SNP 0010.scaffold00043 238180 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238188 1 C A scaffold90 ScafM SNP 0010.scaffold00043 238194 1 C G scaffold90 ScafM SNP 0010.scaffold00043 238202 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238210 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238217 1 T C scaffold90 ScafM SNP 0010.scaffold00043 238233 1 T C scaffold90 ScafM SNP 0010.scaffold00043 238320 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 238333 1 G . scaffold90 ScafM SNP 0010.scaffold00043 238339 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 238345 1 . G scaffold90 ScafM SNP 0010.scaffold00043 238385 1 A G scaffold90 ScafM SNP 0010.scaffold00043 238388 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 238437 1 A . scaffold90 ScafM SNP 0010.scaffold00043 238460 1 C T scaffold90 ScafM SNP 0010.scaffold00043 238489 1 C T scaffold90 ScafM SNP 0010.scaffold00043 238560 1 A T scaffold90 ScafM SNP 0010.scaffold00043 241699 1 A C scaffold90 Both INDEL 0010.scaffold00043 241890 2 .. AT scaffold90 Both SNP 0010.scaffold00043 241909 1 C T scaffold90 Both SNP 0010.scaffold00043 242169 1 T C scaffold90 Both SNP 0010.scaffold00043 242510 1 T A scaffold90 Both INDEL 0010.scaffold00043 242823 2 AC .. scaffold90 Both SNP 0010.scaffold00043 242903 1 A T scaffold90 Both SNP 0010.scaffold00043 242928 1 C T scaffold90 Both SNP 0010.scaffold00043 242930 1 G T scaffold90 Both SNP 0010.scaffold00043 242960 1 T C scaffold90 Both SNP 0010.scaffold00043 242989 1 C T scaffold90 Both SNP 0010.scaffold00043 243003 1 T G scaffold90 ScafM SNP 0010.scaffold00043 243092 1 A G scaffold90 ScafM SNP 0010.scaffold00043 243094 1 C T scaffold90 ScafM SNP 0010.scaffold00043 243098 1 C T scaffold90 ScafM SNP 0010.scaffold00043 243102 1 A T scaffold90 ScafM SNP 0010.scaffold00043 243109 1 T C scaffold90 ScafM SNP 0010.scaffold00043 243115 1 C G scaffold90 ScafM SNP 0010.scaffold00043 243146 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 243150 1 . A scaffold90 ScafM SNP 0010.scaffold00043 243155 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 243162 1 . T scaffold90 ScafM SNP 0010.scaffold00043 243169 1 A G scaffold90 Both SNP 0010.scaffold00043 243284 1 T C scaffold90 ScafM SNP 0010.scaffold00043 243298 2 GA TC scaffold90 Both SNP 0010.scaffold00043 243343 1 A C scaffold90 Both SNP 0010.scaffold00043 243349 1 T A scaffold90 Both SNP 0010.scaffold00043 243859 1 T G scaffold90 Both SNP 0010.scaffold00043 244090 1 A T scaffold90 Both SNP 0010.scaffold00043 244097 1 C T scaffold90 Both SNP 0010.scaffold00043 244193 1 C A scaffold90 Both SNP 0010.scaffold00043 244355 1 G A scaffold90 ScafM SNP 0010.scaffold00043 244407 2 TA AT scaffold90 Both SNP 0010.scaffold00043 244414 1 A G scaffold90 Both SNP 0010.scaffold00043 244490 1 C G scaffold90 Both SNP 0010.scaffold00043 244515 1 T C scaffold90 Both SNP 0010.scaffold00043 244536 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 244602 5 ..... ACAGT scaffold90 Both SNP 0010.scaffold00043 244725 1 A G scaffold90 Both SNP 0010.scaffold00043 244784 1 A T scaffold90 Both SNP 0010.scaffold00043 244909 1 C A scaffold90 Both INDEL 0010.scaffold00043 244923 2 .. CC scaffold90 Both SNP 0010.scaffold00043 244976 1 A G scaffold90 Both SNP 0010.scaffold00043 245014 1 T A scaffold90 Both SNP 0010.scaffold00043 245017 1 G A scaffold90 Both SNP 0010.scaffold00043 245170 1 T C scaffold90 Both SNP 0010.scaffold00043 245293 1 G A scaffold90 Both SNP 0010.scaffold00043 245311 1 G A scaffold90 Both SNP 0010.scaffold00043 245479 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 245826 1 . A scaffold90 Both SNP 0010.scaffold00043 245836 1 A G scaffold90 Both SNP 0010.scaffold00043 246000 1 T G scaffold90 Both SNP 0010.scaffold00043 246059 1 G A scaffold90 Both SNP 0010.scaffold00043 246096 1 G A scaffold90 Both SNP 0010.scaffold00043 246362 1 C A scaffold90 Both SNP 0010.scaffold00043 246467 1 A C scaffold90 ReadM SNP 0010.scaffold00043 246570 1 A G - Both SNP 0010.scaffold00043 246650 1 G C scaffold90 ScafM SNP 0010.scaffold00043 246733 1 C T scaffold90 ScafM SNP 0010.scaffold00043 246751 1 C T scaffold90 Both SNP 0010.scaffold00043 246846 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 247012 6 ACCAAC .....T scaffold90 ScafM SNP 0010.scaffold00043 247069 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 247073 1 T . scaffold90 ScafM SNP 0010.scaffold00043 247234 1 A T scaffold90 ScafM SNP 0010.scaffold00043 247246 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 248151 3 TAA ... scaffold90 ScafM SNP 0010.scaffold00043 248237 1 G A scaffold90 ScafM SNP 0010.scaffold00043 248329 1 C T scaffold90 ScafM SNP 0010.scaffold00043 248375 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 248378 3 ... GTT scaffold90 Both SNP 0010.scaffold00043 248699 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 248767 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 248787 1 . T scaffold90 ScafM SNP 0010.scaffold00043 253588 1 C T scaffold90 Both SNP 0010.scaffold00043 253870 1 C G scaffold90 ScafM SNP 0010.scaffold00043 254096 1 G A scaffold90 ReadM SNP 0010.scaffold00043 255845 1 A G - ReadM SNP 0010.scaffold00043 255870 1 C T - ScafM INDEL 0010.scaffold00043 256364 1 T . scaffold90 ScafM SNP 0010.scaffold00043 256366 1 T A scaffold90 ScafM SNP 0010.scaffold00043 256489 1 G A scaffold90 ReadM SNP 0010.scaffold00043 257675 1 C T - ReadM SNP 0010.scaffold00043 258111 1 G A - Both SNP 0010.scaffold00043 258318 1 A G scaffold90 Both SNP 0010.scaffold00043 258897 1 A G scaffold90 Both SNP 0010.scaffold00043 258952 1 T A scaffold90 ReadM SNP 0010.scaffold00043 259006 1 C A - ReadM SNP 0010.scaffold00043 259039 1 T A - ReadM SNP 0010.scaffold00043 259107 1 C A - Both SNP 0010.scaffold00043 259367 1 T C scaffold90 ReadM SNP 0010.scaffold00043 259416 1 A G - ReadM SNP 0010.scaffold00043 259496 1 T G - ReadM SNP 0010.scaffold00043 259543 1 T A - ReadM SNP 0010.scaffold00043 259736 1 T G - ReadM SNP 0010.scaffold00043 259750 1 G A - ReadM SNP 0010.scaffold00043 259836 1 T C - ReadM SNP 0010.scaffold00043 259874 1 A G - ReadM INDEL 0010.scaffold00043 259993 1 A . - ReadM SNP 0010.scaffold00043 260039 1 A G - Both SNP 0010.scaffold00043 260147 1 T C scaffold90 Both SNP 0010.scaffold00043 260398 1 C G scaffold90 ReadM SNP 0010.scaffold00043 260543 1 C T - ReadM INDEL 0010.scaffold00043 260566 1 A . - ReadM SNP 0010.scaffold00043 260577 1 A G - ReadM SNP 0010.scaffold00043 260668 1 T A - ReadM SNP 0010.scaffold00043 260678 1 T C - ScafM SNP 0010.scaffold00043 260710 1 T C scaffold90 Both SNP 0010.scaffold00043 260742 1 T C scaffold90 Both SNP 0010.scaffold00043 260745 1 G A scaffold90 Both SNP 0010.scaffold00043 260965 1 T A scaffold90 Both INDEL 0010.scaffold00043 261153 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 261224 3 ... TCA scaffold90 ScafM SNP 0010.scaffold00043 261251 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 261262 1 . T scaffold90 ScafM SNP 0010.scaffold00043 261294 1 C T scaffold90 ScafM SNP 0010.scaffold00043 261300 1 G C scaffold90 ScafM SNP 0010.scaffold00043 261302 1 C T scaffold90 ScafM SNP 0010.scaffold00043 261307 1 A G scaffold90 ScafM SNP 0010.scaffold00043 261337 1 A G scaffold90 ScafM SNP 0010.scaffold00043 261340 1 A G scaffold90 ScafM SNP 0010.scaffold00043 261375 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 261408 1 T . scaffold90 ScafM SNP 0010.scaffold00043 261424 1 A G scaffold90 Both SNP 0010.scaffold00043 261529 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 261624 1 A . scaffold90 ScafM SNP 0010.scaffold00043 261626 1 A T scaffold90 ScafM SNP 0010.scaffold00043 261629 1 C G scaffold90 ScafM SNP 0010.scaffold00043 261635 1 A G scaffold90 ScafM SNP 0010.scaffold00043 261682 1 T C scaffold90 ScafM SNP 0010.scaffold00043 261694 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 261695 1 . T scaffold90 ScafM SNP 0010.scaffold00043 262226 1 T A scaffold90 ScafM SNP 0010.scaffold00043 262237 1 A G scaffold90 ScafM SNP 0010.scaffold00043 262242 1 T C scaffold90 ScafM SNP 0010.scaffold00043 262254 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 262259 2 AA .. scaffold90 ScafM SNP 0010.scaffold00043 262298 1 A G scaffold90 ScafM SNP 0010.scaffold00043 262340 1 T C scaffold90 ScafM SNP 0010.scaffold00043 262350 1 A T scaffold90 ScafM SNP 0010.scaffold00043 262792 1 C T scaffold90 ScafM SNP 0010.scaffold00043 262803 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 262811 1 A . scaffold90 ScafM SNP 0010.scaffold00043 262815 1 A G scaffold90 ScafM SNP 0010.scaffold00043 262818 1 A T scaffold90 ScafM SNP 0010.scaffold00043 262820 1 A C scaffold90 ScafM SNP 0010.scaffold00043 262826 1 G C scaffold90 ScafM SNP 0010.scaffold00043 262842 1 C T scaffold90 ScafM SNP 0010.scaffold00043 262851 2 CG TT scaffold90 ScafM SNP 0010.scaffold00043 262876 1 A G scaffold90 ScafM SNP 0010.scaffold00043 262912 1 G A scaffold90 ScafM SNP 0010.scaffold00043 262995 1 C T scaffold90 ScafM SNP 0010.scaffold00043 262998 1 A C scaffold90 ScafM SNP 0010.scaffold00043 263002 1 T G scaffold90 ScafM SNP 0010.scaffold00043 263010 1 T C scaffold90 ScafM SNP 0010.scaffold00043 263044 1 C T scaffold90 ScafM SNP 0010.scaffold00043 263069 1 C T scaffold90 ScafM SNP 0010.scaffold00043 264223 1 G A scaffold90 ScafM SNP 0010.scaffold00043 264225 1 A G scaffold90 ScafM SNP 0010.scaffold00043 264264 1 T C scaffold90 ReadM SNP 0010.scaffold00043 264640 1 G A - ReadM SNP 0010.scaffold00043 264745 1 G A - Both SNP 0010.scaffold00043 264814 1 G A scaffold90 Both SNP 0010.scaffold00043 264874 1 G A scaffold90 Both SNP 0010.scaffold00043 264900 1 C A scaffold90 Both SNP 0010.scaffold00043 264936 1 T C scaffold90 ScafM SNP 0010.scaffold00043 265467 1 T C scaffold90 ScafM SNP 0010.scaffold00043 265504 2 CA TG scaffold90 ScafM SNP 0010.scaffold00043 265610 1 A C scaffold90 ScafM SNP 0010.scaffold00043 265637 1 G A scaffold90 ScafM SNP 0010.scaffold00043 265644 1 A T scaffold90 ScafM SNP 0010.scaffold00043 265646 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 265665 9 ......... TGTTTTTTT scaffold90 ScafM INDEL 0010.scaffold00043 265669 1 . A scaffold90 ScafM INDEL 0010.scaffold00043 265730 2 AA .G scaffold90 ScafM INDEL 0010.scaffold00043 265879 11 TATACTCATAT ........... scaffold90 ScafM INDEL 0010.scaffold00043 265916 1 . T scaffold90 ScafM SNP 0010.scaffold00043 265918 1 C T scaffold90 ScafM SNP 0010.scaffold00043 266676 1 C T scaffold90 ScafM SNP 0010.scaffold00043 266700 2 AG GA scaffold90 ScafM SNP 0010.scaffold00043 266705 1 C T scaffold90 ScafM SNP 0010.scaffold00043 266718 2 AT GC scaffold90 ScafM SNP 0010.scaffold00043 266729 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 266737 1 . A scaffold90 ScafM SNP 0010.scaffold00043 266746 1 G A scaffold90 ScafM SNP 0010.scaffold00043 266752 1 C A scaffold90 ScafM SNP 0010.scaffold00043 266798 6 AGTATT GCCCCA scaffold90 ScafM SNP 0010.scaffold00043 266806 1 C G scaffold90 ScafM SNP 0010.scaffold00043 266812 2 AG GA scaffold90 ScafM INDEL 0010.scaffold00043 266984 10 TTTCTCTCTC .......... scaffold90 Both SNP 0010.scaffold00043 267105 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 267336 5 ..... TAAAA scaffold90 ScafM SNP 0010.scaffold00043 267338 1 C A scaffold90 Both SNP 0010.scaffold00043 267404 1 A G scaffold90 Both SNP 0010.scaffold00043 267410 1 T C scaffold90 Both INDEL 0010.scaffold00043 267415 1 . T scaffold90 ReadM SNP 0010.scaffold00043 267698 1 C T - ReadM SNP 0010.scaffold00043 267767 1 C A - ReadM SNP 0010.scaffold00043 267822 1 T A - ReadM SNP 0010.scaffold00043 267890 1 A G - ReadM SNP 0010.scaffold00043 267893 1 T C - ReadM SNP 0010.scaffold00043 267945 1 T C - ReadM SNP 0010.scaffold00043 268013 1 C T - ReadM INDEL 0010.scaffold00043 268046 1 . T - Both SNP 0010.scaffold00043 268076 1 A G scaffold90 ReadM INDEL 0010.scaffold00043 268719 1 A . - Both SNP 0010.scaffold00043 268990 1 G A scaffold90 Both SNP 0010.scaffold00043 269152 1 A G scaffold90 Both SNP 0010.scaffold00043 269184 1 G A scaffold90 ScafM SNP 0010.scaffold00043 269507 1 T C scaffold90 ScafM SNP 0010.scaffold00043 269532 1 A G scaffold90 ScafM SNP 0010.scaffold00043 269535 1 C T scaffold90 ScafM SNP 0010.scaffold00043 269550 1 C T scaffold90 ScafM SNP 0010.scaffold00043 269554 1 G C scaffold90 ScafM SNP 0010.scaffold00043 269602 1 C A scaffold90 ScafM SNP 0010.scaffold00043 269630 2 CA TC scaffold90 ScafM SNP 0010.scaffold00043 269670 1 A G scaffold90 ScafM SNP 0010.scaffold00043 269789 1 G T scaffold90 ScafM SNP 0010.scaffold00043 269810 1 C T scaffold90 ScafM SNP 0010.scaffold00043 269830 1 G C scaffold90 ScafM SNP 0010.scaffold00043 269837 1 A T scaffold90 ScafM SNP 0010.scaffold00043 269847 1 A G scaffold90 ScafM SNP 0010.scaffold00043 269856 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 269872 1 A . scaffold90 ScafM SNP 0010.scaffold00043 269891 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 269900 5 TTCTC ..... scaffold90 ScafM INDEL 0010.scaffold00043 269908 2 AC .. scaffold90 ScafM SNP 0010.scaffold00043 269961 1 G A scaffold90 ScafM SNP 0010.scaffold00043 269966 2 AT CC scaffold90 ScafM SNP 0010.scaffold00043 269971 1 T G scaffold90 ScafM SNP 0010.scaffold00043 269991 1 G A scaffold90 ScafM SNP 0010.scaffold00043 269996 2 TG CA scaffold90 ScafM SNP 0010.scaffold00043 270004 1 A T scaffold90 ScafM SNP 0010.scaffold00043 270024 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 270256 9 ATTTTGAAA ......... scaffold90 ScafM SNP 0010.scaffold00043 270379 1 C A scaffold90 ScafM SNP 0010.scaffold00043 270485 2 GT CC scaffold90 ScafM INDEL 0010.scaffold00043 270490 1 . T scaffold90 ScafM SNP 0010.scaffold00043 270571 1 A G scaffold90 ScafM SNP 0010.scaffold00043 270709 1 T C scaffold90 ScafM SNP 0010.scaffold00043 270724 1 C T scaffold90 ReadM SNP 0010.scaffold00043 271811 1 C T - ReadM SNP 0010.scaffold00043 271824 1 G A - ReadM SNP 0010.scaffold00043 271916 1 G C - ReadM SNP 0010.scaffold00043 271971 1 G T - ReadM SNP 0010.scaffold00043 272119 1 C G - ReadM SNP 0010.scaffold00043 272141 1 A G - ReadM SNP 0010.scaffold00043 272183 1 A C - ReadM INDEL 0010.scaffold00043 272551 1 C . - ReadM SNP 0010.scaffold00043 272622 1 G C - ReadM SNP 0010.scaffold00043 272666 1 T C - ReadM SNP 0010.scaffold00043 272669 1 C T - ScafM SNP 0010.scaffold00043 272830 1 C A scaffold90 ScafM SNP 0010.scaffold00043 272835 1 T C scaffold90 ScafM SNP 0010.scaffold00043 272840 1 T C scaffold90 ScafM SNP 0010.scaffold00043 272882 1 A T scaffold90 ScafM SNP 0010.scaffold00043 272900 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 272937 1 C . scaffold90 ScafM INDEL 0010.scaffold00043 272952 1 G . scaffold90 ScafM INDEL 0010.scaffold00043 272954 1 T . scaffold90 ScafM SNP 0010.scaffold00043 272991 1 T G scaffold90 ScafM SNP 0010.scaffold00043 273010 1 G A scaffold90 ScafM SNP 0010.scaffold00043 273013 1 A G scaffold90 ScafM SNP 0010.scaffold00043 273015 1 C T scaffold90 ScafM SNP 0010.scaffold00043 273045 1 A C scaffold90 ScafM SNP 0010.scaffold00043 273061 2 AA GC scaffold90 ScafM SNP 0010.scaffold00043 273066 1 A C scaffold90 Both SNP 0010.scaffold00043 273163 1 C G scaffold90 Both INDEL 0010.scaffold00043 273313 1 A . scaffold90 ScafM SNP 0010.scaffold00043 273321 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 273373 7 AGTCAAG ....... scaffold90 Both SNP 0010.scaffold00043 273468 1 C A scaffold90 Both SNP 0010.scaffold00043 273512 1 C G scaffold90 Both SNP 0010.scaffold00043 273585 1 G A scaffold90 Both SNP 0010.scaffold00043 273600 1 T C scaffold90 Both SNP 0010.scaffold00043 273706 1 A T scaffold90 Both SNP 0010.scaffold00043 273724 1 T C scaffold90 Both SNP 0010.scaffold00043 273733 1 C T scaffold90 Both SNP 0010.scaffold00043 273919 1 A G scaffold90 Both SNP 0010.scaffold00043 274009 1 G A scaffold90 Both SNP 0010.scaffold00043 274089 1 C A scaffold90 Both SNP 0010.scaffold00043 274394 1 T A scaffold90 Both SNP 0010.scaffold00043 274512 1 C T scaffold90 Both SNP 0010.scaffold00043 274861 1 G A scaffold90 Both SNP 0010.scaffold00043 274873 1 C G scaffold90 Both SNP 0010.scaffold00043 274894 1 C T scaffold90 ScafM SNP 0010.scaffold00043 274943 1 G A scaffold90 ScafM SNP 0010.scaffold00043 274950 1 T C scaffold90 Both SNP 0010.scaffold00043 274971 1 G A scaffold90 Both SNP 0010.scaffold00043 274998 1 C T scaffold90 Both SNP 0010.scaffold00043 275095 1 C T scaffold90 ReadM SNP 0010.scaffold00043 275143 1 A C - ReadM SNP 0010.scaffold00043 275389 1 G C - ReadM SNP 0010.scaffold00043 275429 1 G A - ScafM SNP 0010.scaffold00043 275745 1 A T scaffold90 ScafM SNP 0010.scaffold00043 275776 1 A G scaffold90 ScafM SNP 0010.scaffold00043 276414 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 276423 6 ...... GAACCC scaffold90 ScafM SNP 0010.scaffold00043 276450 1 T C scaffold90 ScafM SNP 0010.scaffold00043 276735 1 G A scaffold90 ReadM SNP 0010.scaffold00043 277239 1 G A - ReadM SNP 0010.scaffold00043 277307 1 G A - ReadM SNP 0010.scaffold00043 277339 1 G A - Both SNP 0010.scaffold00043 277395 1 G A scaffold90 Both SNP 0010.scaffold00043 277433 1 C A scaffold90 Both SNP 0010.scaffold00043 277677 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 277837 5 CGTTA ..... scaffold90 Both SNP 0010.scaffold00043 278041 1 C T scaffold90 Both SNP 0010.scaffold00043 278066 1 T C scaffold90 Both SNP 0010.scaffold00043 278154 1 A T scaffold90 Both SNP 0010.scaffold00043 278329 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 278383 2 .. AA scaffold90 ScafM SNP 0010.scaffold00043 278385 1 G A scaffold90 ScafM SNP 0010.scaffold00043 278389 1 T A scaffold90 ReadM SNP 0010.scaffold00043 278464 1 G A - ReadM SNP 0010.scaffold00043 278513 1 G A - ReadM SNP 0010.scaffold00043 278521 1 A T - ReadM SNP 0010.scaffold00043 278528 1 G A - Both SNP 0010.scaffold00043 278772 1 G T scaffold90 Both SNP 0010.scaffold00043 278856 1 G A scaffold90 ReadM SNP 0010.scaffold00043 279059 1 A G - ReadM SNP 0010.scaffold00043 279152 1 G A - ReadM SNP 0010.scaffold00043 279188 1 G A - ReadM SNP 0010.scaffold00043 279250 1 A G - ScafM INDEL 0010.scaffold00043 279324 1 . T scaffold90 ScafM SNP 0010.scaffold00043 279538 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 279600 1 . G scaffold90 ScafM SNP 0010.scaffold00043 279626 2 CA TG scaffold90 ScafM SNP 0010.scaffold00043 279716 1 C A scaffold90 ScafM SNP 0010.scaffold00043 279732 1 G A scaffold90 ScafM SNP 0010.scaffold00043 279735 1 A G scaffold90 ScafM SNP 0010.scaffold00043 279738 1 G A scaffold90 ScafM SNP 0010.scaffold00043 279741 1 A G scaffold90 ScafM SNP 0010.scaffold00043 279750 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 279752 1 . T scaffold90 ScafM SNP 0010.scaffold00043 279776 3 ACA GTG scaffold90 ScafM SNP 0010.scaffold00043 279801 1 A G scaffold90 ScafM SNP 0010.scaffold00043 279806 1 T C scaffold90 ScafM SNP 0010.scaffold00043 279811 1 T C scaffold90 ScafM SNP 0010.scaffold00043 279820 1 A C scaffold90 ScafM SNP 0010.scaffold00043 279823 1 T A scaffold90 ScafM SNP 0010.scaffold00043 279864 1 T C scaffold90 ScafM SNP 0010.scaffold00043 279885 2 CT AA scaffold90 ScafM SNP 0010.scaffold00043 279893 1 T C scaffold90 ScafM SNP 0010.scaffold00043 279933 1 A G scaffold90 ScafM SNP 0010.scaffold00043 279936 1 C T scaffold90 ScafM SNP 0010.scaffold00043 279941 1 A G scaffold90 ScafM SNP 0010.scaffold00043 279948 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 279987 1 C . scaffold90 ScafM SNP 0010.scaffold00043 280010 1 A C scaffold90 Both SNP 0010.scaffold00043 280253 1 G A scaffold90 Both SNP 0010.scaffold00043 280335 1 C A scaffold90 Both SNP 0010.scaffold00043 280393 1 T C scaffold90 Both INDEL 0010.scaffold00043 280408 1 . G scaffold90 Both SNP 0010.scaffold00043 280441 1 C T scaffold90 Both INDEL 0010.scaffold00043 280486 1 T . scaffold90 Both INDEL 0010.scaffold00043 280599 2 AA .. scaffold90 Both SNP 0010.scaffold00043 280608 1 G A scaffold90 Both INDEL 0010.scaffold00043 280659 2 .. AG scaffold90 ScafM SNP 0010.scaffold00043 280713 1 C T scaffold90 ScafM SNP 0010.scaffold00043 280715 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 280719 5 ..... AACTA scaffold90 ScafM SNP 0010.scaffold00043 280739 2 TG AA scaffold90 Both SNP 0010.scaffold00043 280795 1 G T scaffold90 Both SNP 0010.scaffold00043 280823 1 A G scaffold90 Both SNP 0010.scaffold00043 280874 1 A C scaffold90 Both SNP 0010.scaffold00043 280938 1 G A scaffold90 ScafM SNP 0010.scaffold00043 280947 1 A T scaffold90 Both SNP 0010.scaffold00043 280954 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 281014 40 TGTTGTTATGACCAAACATTCTCCATCAGCTCATCGTAGT ........................................ scaffold90 ReadM INDEL 0010.scaffold00043 281124 1 C . - ScafM INDEL 0010.scaffold00043 281124 2 CT .G scaffold90 ScafM INDEL 0010.scaffold00043 281185 2 AA .T scaffold90 ScafM SNP 0010.scaffold00043 281188 2 CC TT scaffold90 Both SNP 0010.scaffold00043 281208 1 T C scaffold90 Both SNP 0010.scaffold00043 281222 1 T A scaffold90 ScafM SNP 0010.scaffold00043 281249 1 C T scaffold90 Both SNP 0010.scaffold00043 281319 1 T C scaffold90 Both SNP 0010.scaffold00043 281399 1 A G scaffold90 ScafM SNP 0010.scaffold00043 281404 2 AG GT scaffold90 Both SNP 0010.scaffold00043 281453 1 C G scaffold90 Both INDEL 0010.scaffold00043 281467 1 A . scaffold90 ScafM SNP 0010.scaffold00043 281547 1 A G scaffold90 ScafM SNP 0010.scaffold00043 281551 1 T C scaffold90 ScafM SNP 0010.scaffold00043 281554 1 T C scaffold90 ScafM SNP 0010.scaffold00043 281563 1 C T scaffold90 Both SNP 0010.scaffold00043 281581 1 G A scaffold90 ReadM SNP 0010.scaffold00043 281658 1 G A - ReadM INDEL 0010.scaffold00043 281720 3 ... AAA - ScafM INDEL 0010.scaffold00043 281771 2 AA .. scaffold90 ScafM SNP 0010.scaffold00043 281787 1 G A scaffold90 ScafM SNP 0010.scaffold00043 281789 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 281819 2 TC .. scaffold90 ScafM INDEL 0010.scaffold00043 281880 2 .. AT scaffold90 ScafM INDEL 0010.scaffold00043 281891 1 . A scaffold90 Both SNP 0010.scaffold00043 281901 1 T A scaffold90 Both SNP 0010.scaffold00043 281910 1 C G scaffold90 Both SNP 0010.scaffold00043 282077 1 T C scaffold90 Both SNP 0010.scaffold00043 282081 1 A C scaffold90 Both SNP 0010.scaffold00043 282110 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 282135 2 .. TA scaffold90 Both SNP 0010.scaffold00043 282164 1 T C scaffold90 Both SNP 0010.scaffold00043 282166 1 G A scaffold90 Both SNP 0010.scaffold00043 282233 1 A T scaffold90 Both SNP 0010.scaffold00043 282283 1 G T scaffold90 Both SNP 0010.scaffold00043 282297 1 A G scaffold90 Both INDEL 0010.scaffold00043 282300 1 . A scaffold90 Both SNP 0010.scaffold00043 282448 1 T C scaffold90 Both INDEL 0010.scaffold00043 282565 1 . A scaffold90 Both SNP 0010.scaffold00043 283029 1 G A scaffold90 ScafM SNP 0010.scaffold00043 283064 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 283072 2 CC .G scaffold90 ScafM SNP 0010.scaffold00043 283101 1 G T scaffold90 ScafM SNP 0010.scaffold00043 283130 1 A C scaffold90 ScafM SNP 0010.scaffold00043 283138 1 G T scaffold90 ScafM SNP 0010.scaffold00043 283151 1 A T scaffold90 ScafM SNP 0010.scaffold00043 283176 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 283211 1 . A scaffold90 ScafM SNP 0010.scaffold00043 283220 1 A C scaffold90 ScafM SNP 0010.scaffold00043 283231 1 A G scaffold90 Both SNP 0010.scaffold00043 283272 1 G C scaffold90 ScafM SNP 0010.scaffold00043 283303 2 GT CC scaffold90 ScafM SNP 0010.scaffold00043 283573 1 A C scaffold90 ScafM SNP 0010.scaffold00043 283608 1 T G scaffold90 ScafM SNP 0010.scaffold00043 283646 1 T G scaffold90 ScafM SNP 0010.scaffold00043 283658 1 A T scaffold90 ScafM SNP 0010.scaffold00043 283660 1 T A scaffold90 ScafM SNP 0010.scaffold00043 283707 1 T C scaffold90 ScafM SNP 0010.scaffold00043 283788 1 T G scaffold90 ScafM SNP 0010.scaffold00043 283791 2 AA TT scaffold90 ScafM SNP 0010.scaffold00043 283796 1 A T scaffold90 ScafM SNP 0010.scaffold00043 283798 6 GAATAA TCCCCT scaffold90 ScafM SNP 0010.scaffold00043 283828 1 C G scaffold90 ScafM SNP 0010.scaffold00043 283837 1 G C scaffold90 ScafM SNP 0010.scaffold00043 283843 1 A T scaffold90 ScafM SNP 0010.scaffold00043 283869 1 T C scaffold90 ScafM SNP 0010.scaffold00043 283871 1 T A scaffold90 ScafM SNP 0010.scaffold00043 283906 1 G A scaffold90 ScafM SNP 0010.scaffold00043 283917 1 A G scaffold90 ScafM SNP 0010.scaffold00043 283920 1 A C scaffold90 ScafM SNP 0010.scaffold00043 283924 1 T C scaffold90 ScafM SNP 0010.scaffold00043 283940 1 C A scaffold90 ScafM SNP 0010.scaffold00043 283942 1 T A scaffold90 ScafM SNP 0010.scaffold00043 283953 1 C T scaffold90 ScafM SNP 0010.scaffold00043 284373 1 G T scaffold90 ScafM SNP 0010.scaffold00043 284415 1 T A scaffold90 ScafM SNP 0010.scaffold00043 284459 1 G A scaffold90 ScafM SNP 0010.scaffold00043 284461 1 T C scaffold90 ScafM SNP 0010.scaffold00043 284474 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 284503 1 A . scaffold90 ScafM SNP 0010.scaffold00043 284519 1 C A scaffold90 ScafM SNP 0010.scaffold00043 284521 2 AT GA scaffold90 ScafM SNP 0010.scaffold00043 284529 2 CC TT scaffold90 Both SNP 0010.scaffold00043 284623 1 C G scaffold90 ScafM SNP 0010.scaffold00043 284755 1 G A scaffold90 ScafM SNP 0010.scaffold00043 284765 1 G T scaffold90 ScafM SNP 0010.scaffold00043 284769 1 C T scaffold90 ScafM SNP 0010.scaffold00043 284781 1 T A scaffold90 ScafM SNP 0010.scaffold00043 284878 2 CT TC scaffold90 ScafM SNP 0010.scaffold00043 284882 1 G A scaffold90 ScafM SNP 0010.scaffold00043 284884 1 G T scaffold90 ScafM SNP 0010.scaffold00043 284894 1 C A scaffold90 ScafM SNP 0010.scaffold00043 284909 1 C G scaffold90 ScafM SNP 0010.scaffold00043 284917 1 A G scaffold90 ScafM SNP 0010.scaffold00043 284931 1 G A scaffold90 Both SNP 0010.scaffold00043 284960 1 C T scaffold90 Both SNP 0010.scaffold00043 284969 1 C A scaffold90 Both SNP 0010.scaffold00043 285009 1 G A scaffold90 Both SNP 0010.scaffold00043 285067 1 C T scaffold90 Both SNP 0010.scaffold00043 285089 1 G A scaffold90 Both SNP 0010.scaffold00043 285129 1 T G scaffold90 Both SNP 0010.scaffold00043 285159 1 C A scaffold90 Both SNP 0010.scaffold00043 285192 1 C T scaffold90 Both SNP 0010.scaffold00043 285201 1 A G scaffold90 Both SNP 0010.scaffold00043 285253 1 G C scaffold90 Both SNP 0010.scaffold00043 285326 1 C T scaffold90 Both SNP 0010.scaffold00043 285351 1 A G scaffold90 Both SNP 0010.scaffold00043 285362 1 G C scaffold90 Both SNP 0010.scaffold00043 285380 1 G A scaffold90 Both SNP 0010.scaffold00043 285544 1 G T scaffold90 Both SNP 0010.scaffold00043 285631 1 G A scaffold90 Both SNP 0010.scaffold00043 285771 1 G T scaffold90 Both INDEL 0010.scaffold00043 286062 3 GAA ... scaffold90 ScafM INDEL 0010.scaffold00043 286142 6 ACTGAG ...... scaffold90 Both SNP 0010.scaffold00043 286243 1 A T scaffold90 Both SNP 0010.scaffold00043 286380 1 A G scaffold90 Both SNP 0010.scaffold00043 286573 1 T C scaffold90 Both SNP 0010.scaffold00043 286846 1 C T scaffold90 Both SNP 0010.scaffold00043 286938 1 G C scaffold90 Both INDEL 0010.scaffold00043 286986 1 . C scaffold90 Both SNP 0010.scaffold00043 287102 1 T C scaffold90 ReadM SNP 0010.scaffold00043 287170 1 A T - ReadM SNP 0010.scaffold00043 287177 1 A G - ReadM INDEL 0010.scaffold00043 287319 1 . G - ReadM SNP 0010.scaffold00043 287387 1 A T - ReadM SNP 0010.scaffold00043 287462 1 C G - ReadM SNP 0010.scaffold00043 287475 1 C T - Both SNP 0010.scaffold00043 287569 1 G A scaffold90 Both SNP 0010.scaffold00043 287694 1 A G scaffold90 Both SNP 0010.scaffold00043 287770 1 A T scaffold90 Both SNP 0010.scaffold00043 287789 1 C T scaffold90 Both SNP 0010.scaffold00043 287821 1 C G scaffold90 Both INDEL 0010.scaffold00043 287833 1 A . scaffold90 Both SNP 0010.scaffold00043 287891 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 288151 2 AA .. scaffold90 Both SNP 0010.scaffold00043 288269 1 G A scaffold90 Both SNP 0010.scaffold00043 288325 1 T C scaffold90 Both SNP 0010.scaffold00043 288346 1 A G scaffold90 Both SNP 0010.scaffold00043 288402 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 288658 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 288815 2 AA .. scaffold90 ScafM SNP 0010.scaffold00043 288849 1 G A scaffold90 ScafM SNP 0010.scaffold00043 288852 1 T C scaffold90 ScafM SNP 0010.scaffold00043 288861 1 G A scaffold90 ScafM SNP 0010.scaffold00043 288867 1 G A scaffold90 ScafM SNP 0010.scaffold00043 288884 2 CG TC scaffold90 ScafM SNP 0010.scaffold00043 288894 1 T C scaffold90 ScafM SNP 0010.scaffold00043 289359 1 A C scaffold90 ScafM SNP 0010.scaffold00043 289422 1 G A scaffold90 Both SNP 0010.scaffold00043 289531 1 G A scaffold90 ReadM SNP 0010.scaffold00043 289705 1 T C - Both SNP 0010.scaffold00043 289897 1 C T scaffold90 Both SNP 0010.scaffold00043 290140 1 A C scaffold90 Both SNP 0010.scaffold00043 290195 1 C A scaffold90 Both SNP 0010.scaffold00043 290445 1 C G scaffold90 Both SNP 0010.scaffold00043 290830 1 A T scaffold90 Both SNP 0010.scaffold00043 291031 1 C T scaffold90 Both SNP 0010.scaffold00043 291059 1 A C scaffold90 Both SNP 0010.scaffold00043 291096 1 T C scaffold90 Both SNP 0010.scaffold00043 291167 1 A G scaffold90 Both SNP 0010.scaffold00043 291831 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 292070 4 .... ATTG scaffold90 ReadM INDEL 0010.scaffold00043 292675 3 ... ATA - Both INDEL 0010.scaffold00043 292676 3 ... TAT scaffold90 Both SNP 0010.scaffold00043 292833 1 A G scaffold90 Both SNP 0010.scaffold00043 292866 1 C A scaffold90 ReadM SNP 0010.scaffold00043 293003 1 T G - ReadM SNP 0010.scaffold00043 293056 1 T C - Both SNP 0010.scaffold00043 293191 1 T C scaffold90 Both SNP 0010.scaffold00043 293227 1 T A scaffold90 ReadM SNP 0010.scaffold00043 293280 1 T A - ScafM INDEL 0010.scaffold00043 293416 5 TTTTT ..... scaffold90 Both SNP 0010.scaffold00043 293662 1 C G scaffold90 Both INDEL 0010.scaffold00043 293773 3 ... AGT scaffold90 ReadM INDEL 0010.scaffold00043 293776 3 ... AGG - ScafM SNP 0010.scaffold00043 294769 1 T C scaffold90 Both SNP 0010.scaffold00043 295264 1 A G scaffold90 Both SNP 0010.scaffold00043 295300 1 T C scaffold90 ReadM SNP 0010.scaffold00043 295489 1 C T - ReadM SNP 0010.scaffold00043 295744 1 T A - ReadM INDEL 0010.scaffold00043 295754 1 . A - ReadM SNP 0010.scaffold00043 295872 1 A T - ReadM SNP 0010.scaffold00043 295886 1 A G - ReadM SNP 0010.scaffold00043 295973 1 T A - Both SNP 0010.scaffold00043 296041 1 G A scaffold90 Both SNP 0010.scaffold00043 296206 1 A T scaffold90 Both SNP 0010.scaffold00043 296440 1 G A scaffold90 ReadM SNP 0010.scaffold00043 296617 1 A C - ReadM INDEL 0010.scaffold00043 296792 1 . T - Both SNP 0010.scaffold00043 296926 1 T A scaffold90 Both SNP 0010.scaffold00043 296939 1 G C scaffold90 Both SNP 0010.scaffold00043 297088 1 C G scaffold90 ScafM SNP 0010.scaffold00043 297094 1 G A scaffold90 ScafM SNP 0010.scaffold00043 297097 1 G A scaffold90 ScafM SNP 0010.scaffold00043 297157 1 G T scaffold90 ScafM SNP 0010.scaffold00043 297192 1 A G scaffold90 ScafM SNP 0010.scaffold00043 297217 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 297234 58 AGAATGGTGAGAATAAAAGGGGAGTGAAGGCTGGGTATTGGGCAGCTATTGATTGAGT .......................................................... scaffold90 ScafM INDEL 0010.scaffold00043 297294 24 AGTCTGGGGAATTGGGAGAGAGTG ........................ scaffold90 Both SNP 0010.scaffold00043 297389 1 A C scaffold90 ReadM SNP 0010.scaffold00043 297480 1 C G - ReadM SNP 0010.scaffold00043 297524 1 C T - ReadM SNP 0010.scaffold00043 297564 1 G A - Both SNP 0010.scaffold00043 297610 1 A G scaffold90 Both SNP 0010.scaffold00043 297636 1 A G scaffold90 ScafM SNP 0010.scaffold00043 297767 1 G A scaffold90 ScafM SNP 0010.scaffold00043 297806 1 C T scaffold90 ScafM SNP 0010.scaffold00043 297816 1 C G scaffold90 ScafM SNP 0010.scaffold00043 297827 1 G A scaffold90 Both SNP 0010.scaffold00043 297887 1 G C scaffold90 Both SNP 0010.scaffold00043 297939 1 C T scaffold90 ReadM INDEL 0010.scaffold00043 298034 1 . A - ReadM SNP 0010.scaffold00043 298155 1 C T - ReadM SNP 0010.scaffold00043 298187 1 C T - ReadM SNP 0010.scaffold00043 298189 1 C T - ReadM SNP 0010.scaffold00043 298206 1 G C - ReadM SNP 0010.scaffold00043 298366 1 A G - ReadM SNP 0010.scaffold00043 298375 1 G A - Both SNP 0010.scaffold00043 298445 1 C T scaffold90 ReadM SNP 0010.scaffold00043 298512 1 G A - ReadM SNP 0010.scaffold00043 298576 2 GT CC - ReadM SNP 0010.scaffold00043 298609 1 C A - ReadM SNP 0010.scaffold00043 298693 1 G A - ReadM SNP 0010.scaffold00043 298705 1 G A - ReadM SNP 0010.scaffold00043 298738 1 C T - ReadM SNP 0010.scaffold00043 298835 1 C G - ReadM SNP 0010.scaffold00043 298932 1 G A - ReadM SNP 0010.scaffold00043 299130 1 A T - ReadM SNP 0010.scaffold00043 299180 1 C A - ReadM SNP 0010.scaffold00043 299231 1 G A - ReadM SNP 0010.scaffold00043 299258 1 A G - ReadM SNP 0010.scaffold00043 299268 1 C A - ReadM SNP 0010.scaffold00043 299406 1 G T - ReadM SNP 0010.scaffold00043 299446 1 C T - ReadM SNP 0010.scaffold00043 299479 1 A C - ReadM INDEL 0010.scaffold00043 299648 3 ... AGA - ReadM INDEL 0010.scaffold00043 299649 3 ... GAC - ReadM SNP 0010.scaffold00043 299770 1 C T - ScafM INDEL 0010.scaffold00043 299910 5 ..... AAACA scaffold90 ScafM SNP 0010.scaffold00043 299914 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 299986 16 ................ ATGAGAATAAAAGGGG scaffold90 ScafM INDEL 0010.scaffold00043 299990 33 ................................. GAGGCTGGGTATTGGCCAGCTATTGATTGAGTT scaffold90 ScafM SNP 0010.scaffold00043 300005 1 A G scaffold90 ScafM SNP 0010.scaffold00043 300018 1 C T scaffold90 ScafM SNP 0010.scaffold00043 300043 1 G A scaffold90 ScafM SNP 0010.scaffold00043 300092 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 300119 12 ............ TCTGGTATTATA scaffold90 ScafM SNP 0010.scaffold00043 300129 1 G T scaffold90 Both SNP 0010.scaffold00043 300211 1 C T scaffold90 Both SNP 0010.scaffold00043 300319 1 C T scaffold90 Both SNP 0010.scaffold00043 300864 1 G T scaffold90 Both SNP 0010.scaffold00043 300898 1 G T scaffold90 Both SNP 0010.scaffold00043 301104 1 C G scaffold90 Both SNP 0010.scaffold00043 301323 1 G A scaffold90 Both SNP 0010.scaffold00043 301462 1 C A scaffold90 Both SNP 0010.scaffold00043 301779 1 T C scaffold90 Both SNP 0010.scaffold00043 301985 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 302023 1 . A scaffold90 ReadM INDEL 0010.scaffold00043 302042 1 . T - Both SNP 0010.scaffold00043 302297 1 C T scaffold90 Both INDEL 0010.scaffold00043 303007 1 A . scaffold90 Both SNP 0010.scaffold00043 303360 1 C T scaffold90 Both SNP 0010.scaffold00043 303922 1 C T scaffold90 Both SNP 0010.scaffold00043 303924 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 303930 2 .. TT scaffold90 ScafM INDEL 0010.scaffold00043 303966 4 TTAA .... scaffold90 ScafM INDEL 0010.scaffold00043 304015 11 AAGAGAAAGAG ........... scaffold90 Both SNP 0010.scaffold00043 304155 1 A G scaffold90 Both SNP 0010.scaffold00043 304260 1 T G scaffold90 Both SNP 0010.scaffold00043 304267 1 C T scaffold90 Both INDEL 0010.scaffold00043 304310 1 . A scaffold90 Both SNP 0010.scaffold00043 304448 1 C T scaffold90 Both INDEL 0010.scaffold00043 304558 1 . A scaffold90 ReadM SNP 0010.scaffold00043 304898 1 T C - ReadM SNP 0010.scaffold00043 305923 1 T C - ReadM SNP 0010.scaffold00043 306020 1 C T - ReadM SNP 0010.scaffold00043 306100 1 G A - ReadM SNP 0010.scaffold00043 306108 1 A G - ReadM SNP 0010.scaffold00043 306198 1 A T - ReadM SNP 0010.scaffold00043 306284 1 G T - ReadM INDEL 0010.scaffold00043 306348 1 C . - ReadM SNP 0010.scaffold00043 306486 1 T C - ReadM SNP 0010.scaffold00043 306590 1 A G - ReadM SNP 0010.scaffold00043 306597 1 A T - ReadM SNP 0010.scaffold00043 306649 1 T C - ReadM SNP 0010.scaffold00043 306709 1 A C - ReadM SNP 0010.scaffold00043 306714 1 G A - ReadM SNP 0010.scaffold00043 306869 1 G A - ReadM SNP 0010.scaffold00043 306986 1 G A - ReadM SNP 0010.scaffold00043 307241 1 A G - ReadM SNP 0010.scaffold00043 307254 1 C T - Both SNP 0010.scaffold00043 307510 1 A G scaffold90 Both SNP 0010.scaffold00043 307516 1 C T scaffold90 ReadM SNP 0010.scaffold00043 307801 1 C T - ReadM SNP 0010.scaffold00043 307807 1 A C - ReadM SNP 0010.scaffold00043 307837 1 C T - ReadM SNP 0010.scaffold00043 307865 1 T C - ReadM INDEL 0010.scaffold00043 307911 1 T . - ReadM SNP 0010.scaffold00043 307921 1 T C - Both SNP 0010.scaffold00043 308028 1 T C scaffold90 Both SNP 0010.scaffold00043 308103 1 T C scaffold90 Both SNP 0010.scaffold00043 308301 1 A T scaffold90 Both SNP 0010.scaffold00043 308828 1 G A scaffold90 ScafM SNP 0010.scaffold00043 308877 2 GT AA scaffold90 ScafM SNP 0010.scaffold00043 309008 2 AA GG scaffold90 ScafM SNP 0010.scaffold00043 309342 1 C T scaffold90 ReadM SNP 0010.scaffold00043 311178 1 C T - ReadM SNP 0010.scaffold00043 311249 1 T C - ReadM INDEL 0010.scaffold00043 311529 2 .. TG - ReadM SNP 0010.scaffold00043 311782 1 A G - ReadM INDEL 0010.scaffold00043 311793 1 A . - ReadM INDEL 0010.scaffold00043 312102 1 T . - Both SNP 0010.scaffold00043 313569 1 A G scaffold90 ScafM SNP 0010.scaffold00043 314451 1 T A scaffold90 Both SNP 0010.scaffold00043 315508 1 A G scaffold90 Both INDEL 0010.scaffold00043 319087 1 T . scaffold90 Both SNP 0010.scaffold00043 319186 1 A G scaffold90 ReadM SNP 0010.scaffold00043 319400 1 T A - ReadM SNP 0010.scaffold00043 319436 1 A G - Both SNP 0010.scaffold00043 319605 1 G C scaffold90 Both SNP 0010.scaffold00043 319657 1 C T scaffold90 ScafM SNP 0010.scaffold00043 319894 1 C T scaffold90 ScafM SNP 0010.scaffold00043 320400 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 320414 1 A . scaffold90 ScafM SNP 0010.scaffold00043 320416 1 A C scaffold90 ScafM SNP 0010.scaffold00043 320426 1 A G scaffold90 ScafM SNP 0010.scaffold00043 320448 1 A C scaffold90 ScafM SNP 0010.scaffold00043 320455 1 A T scaffold90 ScafM SNP 0010.scaffold00043 320458 1 T G scaffold90 ScafM SNP 0010.scaffold00043 320460 1 C T scaffold90 ScafM SNP 0010.scaffold00043 320480 1 C T scaffold90 ScafM SNP 0010.scaffold00043 320514 1 T C scaffold90 ScafM SNP 0010.scaffold00043 320562 1 A G scaffold90 ScafM SNP 0010.scaffold00043 320568 1 G T scaffold90 ScafM INDEL 0010.scaffold00043 320573 7 ....... CTATAGC scaffold90 ScafM INDEL 0010.scaffold00043 320577 3 ... TGG scaffold90 ScafM INDEL 0010.scaffold00043 320578 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 320579 1 . T scaffold90 ScafM INDEL 0010.scaffold00043 320581 3 ... AAA scaffold90 ScafM SNP 0010.scaffold00043 320607 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 320611 7 TTTCCTT ....... scaffold90 ScafM INDEL 0010.scaffold00043 320624 1 T . scaffold90 ScafM INDEL 0010.scaffold00043 320626 1 T . scaffold90 ScafM SNP 0010.scaffold00043 320628 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 320640 2 .A CG scaffold90 ScafM SNP 0010.scaffold00043 320649 2 AG CT scaffold90 ScafM INDEL 0010.scaffold00043 320706 2 TA .. scaffold90 ScafM SNP 0010.scaffold00043 320721 1 A G scaffold90 ScafM SNP 0010.scaffold00043 320742 1 A G scaffold90 ScafM SNP 0010.scaffold00043 320957 1 G A scaffold90 ScafM INDEL 0010.scaffold00043 320985 33 TATACCCACCAGAGATAAACAATTTTTAAAAAA ................................. scaffold90 ScafM SNP 0010.scaffold00043 321065 1 A C scaffold90 ScafM SNP 0010.scaffold00043 321069 1 G T scaffold90 ScafM SNP 0010.scaffold00043 321087 1 T C scaffold90 ScafM SNP 0010.scaffold00043 321167 1 G T scaffold90 ScafM SNP 0010.scaffold00043 321170 1 C G scaffold90 ScafM SNP 0010.scaffold00043 321204 1 A C scaffold90 ScafM SNP 0010.scaffold00043 321244 1 C T scaffold90 ScafM SNP 0010.scaffold00043 321288 1 T C scaffold90 ScafM SNP 0010.scaffold00043 321338 1 G A scaffold90 ScafM SNP 0010.scaffold00043 321357 1 C G scaffold90 ScafM SNP 0010.scaffold00043 321394 1 A G scaffold90 ScafM SNP 0010.scaffold00043 321994 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 322016 1 . T scaffold90 ScafM SNP 0010.scaffold00043 322030 1 T C scaffold90 ScafM SNP 0010.scaffold00043 322044 2 CA TC scaffold90 ScafM SNP 0010.scaffold00043 322062 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322100 1 C A scaffold90 ScafM SNP 0010.scaffold00043 322125 1 C A scaffold90 ScafM SNP 0010.scaffold00043 322141 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322338 1 G C scaffold90 ScafM SNP 0010.scaffold00043 322418 2 TC AA scaffold90 ScafM SNP 0010.scaffold00043 322422 1 C T scaffold90 ScafM INDEL 0010.scaffold00043 322447 15 ............... ACTAAAGATAGTAAT scaffold90 ScafM SNP 0010.scaffold00043 322456 1 A C scaffold90 ScafM SNP 0010.scaffold00043 322472 1 G C scaffold90 ScafM SNP 0010.scaffold00043 322485 1 A C scaffold90 ScafM INDEL 0010.scaffold00043 322503 1 C . scaffold90 ScafM SNP 0010.scaffold00043 322530 2 TA CT scaffold90 ScafM SNP 0010.scaffold00043 322544 1 G A scaffold90 ScafM SNP 0010.scaffold00043 322551 1 C A scaffold90 ScafM SNP 0010.scaffold00043 322569 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322579 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322581 1 T C scaffold90 ScafM SNP 0010.scaffold00043 322583 1 G C scaffold90 ScafM SNP 0010.scaffold00043 322599 1 G A scaffold90 ScafM SNP 0010.scaffold00043 322610 1 C A scaffold90 ScafM INDEL 0010.scaffold00043 322612 2 .C AA scaffold90 ScafM INDEL 0010.scaffold00043 322618 1 . T scaffold90 ScafM SNP 0010.scaffold00043 322678 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322711 1 G A scaffold90 ScafM SNP 0010.scaffold00043 322714 1 A C scaffold90 ScafM SNP 0010.scaffold00043 322719 1 A T scaffold90 ScafM SNP 0010.scaffold00043 322767 1 T C scaffold90 ScafM SNP 0010.scaffold00043 322773 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 322778 1 G . scaffold90 ScafM INDEL 0010.scaffold00043 322780 4 TTCG .... scaffold90 ScafM SNP 0010.scaffold00043 322810 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 322818 4 .... AATT scaffold90 ScafM SNP 0010.scaffold00043 322825 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322844 1 T C scaffold90 ScafM SNP 0010.scaffold00043 322859 1 A G scaffold90 ScafM SNP 0010.scaffold00043 322861 1 C A scaffold90 ScafM SNP 0010.scaffold00043 322863 1 T A scaffold90 ScafM INDEL 0010.scaffold00043 322888 1 A . scaffold90 ScafM SNP 0010.scaffold00043 322919 1 C T scaffold90 Both SNP 0010.scaffold00043 323027 1 A G scaffold90 ScafM SNP 0010.scaffold00043 323299 2 CC AA scaffold90 ScafM SNP 0010.scaffold00043 323330 1 G A scaffold90 ScafM SNP 0010.scaffold00043 323359 1 A G scaffold90 ScafM SNP 0010.scaffold00043 323365 1 T C scaffold90 ScafM SNP 0010.scaffold00043 323552 1 G A scaffold90 Both SNP 0010.scaffold00043 323567 1 A G scaffold90 ScafM INDEL 0010.scaffold00043 323660 8 ........ ATGAAGCA scaffold90 ScafM SNP 0010.scaffold00043 323665 1 T G scaffold90 ScafM SNP 0010.scaffold00043 323684 1 A T scaffold90 Both SNP 0010.scaffold00043 323738 1 C T scaffold90 Both SNP 0010.scaffold00043 323766 1 T C scaffold90 Both SNP 0010.scaffold00043 323920 1 A T scaffold90 ScafM SNP 0010.scaffold00043 324356 1 T G scaffold90 ScafM INDEL 0010.scaffold00043 325598 5 ATGAC ..... scaffold90 ScafM SNP 0010.scaffold00043 325637 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 325650 3 AAT ... scaffold90 ScafM SNP 0010.scaffold00043 325726 1 C A scaffold90 ScafM SNP 0010.scaffold00043 325735 1 G A scaffold90 ScafM SNP 0010.scaffold00043 325737 1 A G scaffold90 ScafM SNP 0010.scaffold00043 325744 1 C T scaffold90 ScafM SNP 0010.scaffold00043 325773 1 C T scaffold90 ScafM SNP 0010.scaffold00043 325827 1 A T scaffold90 ScafM INDEL 0010.scaffold00043 325831 2 TG .. scaffold90 ScafM SNP 0010.scaffold00043 325849 1 T A scaffold90 ScafM SNP 0010.scaffold00043 325864 1 A T scaffold90 ScafM SNP 0010.scaffold00043 325979 1 C G scaffold90 ScafM INDEL 0010.scaffold00043 326027 4 .... ATAT scaffold90 ScafM INDEL 0010.scaffold00043 326634 5 ..... AACTA scaffold90 ScafM INDEL 0010.scaffold00043 326636 1 . T scaffold90 ScafM SNP 0010.scaffold00043 326638 1 C T scaffold90 ScafM SNP 0010.scaffold00043 326640 1 T G scaffold90 ScafM SNP 0010.scaffold00043 326642 2 CC TA scaffold90 ScafM INDEL 0010.scaffold00043 326646 4 .... GACA scaffold90 ScafM INDEL 0010.scaffold00043 326701 8 ........ TGATACAG scaffold90 ScafM SNP 0010.scaffold00043 326835 1 T C scaffold90 ScafM SNP 0010.scaffold00043 326837 1 T C scaffold90 ScafM INDEL 0010.scaffold00043 327230 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 327287 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 327296 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 327429 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 327433 1 G T scaffold8604 ScafM INDEL 0010.scaffold00043 327469 2 .. TT scaffold8604 ScafM INDEL 0010.scaffold00043 327550 2 .. CC scaffold8604 ScafM SNP 0010.scaffold00043 327552 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 327559 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 327562 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 327568 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 327600 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 328230 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 328353 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 328414 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 328599 3 ... GGA scaffold8604 ScafM SNP 0010.scaffold00043 328620 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 328683 33 ................................. TTTTTTTTTTTTTGAGGGGAAAATAATATCAAT scaffold8604 ScafM INDEL 0010.scaffold00043 328709 8 ........ ATAATAAC scaffold8604 ScafM INDEL 0010.scaffold00043 328780 1 T . scaffold8604 Both SNP 0010.scaffold00043 329024 1 A C scaffold8604 Both SNP 0010.scaffold00043 329069 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 329220 3 ... GAT scaffold8604 ScafM INDEL 0010.scaffold00043 329346 5 ..... TAATC scaffold8604 ScafM INDEL 0010.scaffold00043 329372 1 T . scaffold8604 ScafM INDEL 0010.scaffold00043 329385 2 AA .. scaffold8604 ScafM SNP 0010.scaffold00043 329394 3 TTG AAT scaffold8604 ScafM SNP 0010.scaffold00043 329410 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 329591 1 . G scaffold8604 ScafM SNP 0010.scaffold00043 329596 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 329603 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 329639 2 GG AA scaffold8604 ScafM SNP 0010.scaffold00043 329644 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 329705 16 ................ TTTTTTTTATTTTTTT scaffold8604 ScafM SNP 0010.scaffold00043 329785 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 330620 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 330643 1 G T scaffold8604 ScafM INDEL 0010.scaffold00043 330838 1 . C scaffold8604 ScafM INDEL 0010.scaffold00043 330872 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 330950 1 . G scaffold8604 ScafM INDEL 0010.scaffold00043 330995 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 331124 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 331165 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 331249 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 331272 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 331321 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 331329 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 331407 4 GCGT .... scaffold8604 ScafM SNP 0010.scaffold00043 331428 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 331434 2 AG TT scaffold8604 ScafM SNP 0010.scaffold00043 331440 1 C G scaffold8604 ScafM SNP 0010.scaffold00043 331447 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 331453 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 331456 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 331462 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 331465 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 331466 4 .... ATTA scaffold8604 ScafM SNP 0010.scaffold00043 331470 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 331480 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 331493 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 331521 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 331525 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 331536 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 331650 1 A G scaffold8604 Both INDEL 0010.scaffold00043 332042 1 . T scaffold8604 Both SNP 0010.scaffold00043 332070 1 C T scaffold8604 ReadM SNP 0010.scaffold00043 332077 1 G A - ReadM SNP 0010.scaffold00043 332085 1 C A - ReadM SNP 0010.scaffold00043 332194 1 A C - Both SNP 0010.scaffold00043 332223 1 C T scaffold8604 Both INDEL 0010.scaffold00043 332345 1 T . scaffold8604 ReadM SNP 0010.scaffold00043 332743 1 T C - ReadM SNP 0010.scaffold00043 332766 1 C T - ReadM SNP 0010.scaffold00043 332807 1 C A - Both SNP 0010.scaffold00043 333007 1 T G scaffold8604 Both SNP 0010.scaffold00043 333078 1 A T scaffold8604 Both SNP 0010.scaffold00043 333320 1 A G scaffold8604 Both SNP 0010.scaffold00043 333571 1 C A scaffold8604 ReadM INDEL 0010.scaffold00043 333615 1 T . - ReadM SNP 0010.scaffold00043 333709 1 A G - ReadM SNP 0010.scaffold00043 333776 1 C T - ReadM SNP 0010.scaffold00043 333780 1 A G - ReadM SNP 0010.scaffold00043 333879 1 T C - ReadM SNP 0010.scaffold00043 333881 1 G A - ReadM SNP 0010.scaffold00043 333933 1 A T - ScafM INDEL 0010.scaffold00043 333933 1 . T scaffold8604 Both SNP 0010.scaffold00043 333947 1 G A scaffold8604 Both INDEL 0010.scaffold00043 333979 1 T . scaffold8604 Both SNP 0010.scaffold00043 334273 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 334437 2 .. AA scaffold8604 ScafM SNP 0010.scaffold00043 334469 2 AG CA scaffold8604 ScafM SNP 0010.scaffold00043 334487 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 334493 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 334514 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 334518 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 334529 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 334546 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 334557 2 TT AA scaffold8604 ScafM SNP 0010.scaffold00043 334561 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 334579 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 334584 2 CG AA scaffold8604 ScafM INDEL 0010.scaffold00043 334597 1 C . scaffold8604 ScafM SNP 0010.scaffold00043 334622 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 334632 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 334637 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 334647 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 334656 9 ......... ACGATTGCT scaffold8604 ScafM SNP 0010.scaffold00043 334668 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 334671 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 334678 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 334680 1 C G scaffold8604 ScafM INDEL 0010.scaffold00043 334688 1 T . scaffold8604 ScafM INDEL 0010.scaffold00043 334690 1 G . scaffold8604 ScafM SNP 0010.scaffold00043 334696 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 334717 1 C . scaffold8604 ScafM SNP 0010.scaffold00043 334738 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 334751 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 334755 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 334769 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 334795 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 334805 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 334809 4 .... TATT scaffold8604 ScafM INDEL 0010.scaffold00043 334850 8 ........ ACATTTTT scaffold8604 ScafM SNP 0010.scaffold00043 334871 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 334888 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 334969 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 335673 1 C T - ScafM SNP 0010.scaffold00043 335842 1 G T scaffold8604 ScafM INDEL 0010.scaffold00043 335850 7 ....... AGAAAAG scaffold8604 ScafM INDEL 0010.scaffold00043 335872 7 ....... CCTAAAT scaffold8604 Both SNP 0010.scaffold00043 335906 1 T C scaffold8604 Both SNP 0010.scaffold00043 335914 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 335989 4 TGTT .... scaffold8604 Both SNP 0010.scaffold00043 336102 1 C T scaffold8604 Both SNP 0010.scaffold00043 336131 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 336318 3 ... AAA scaffold8604 Both SNP 0010.scaffold00043 336327 1 G A scaffold8604 Both SNP 0010.scaffold00043 336423 1 A C scaffold8604 Both SNP 0010.scaffold00043 336474 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 336612 1 T A scaffold8604 Both SNP 0010.scaffold00043 336641 1 T C scaffold8604 Both SNP 0010.scaffold00043 336771 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 336790 1 A T - ReadM SNP 0010.scaffold00043 336833 1 G A - ScafM SNP 0010.scaffold00043 337546 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 337617 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 337624 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 337639 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 337778 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 337781 1 C A scaffold8604 ScafM INDEL 0010.scaffold00043 337786 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 337809 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 337813 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 337825 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 337838 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 337866 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 337870 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 337872 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 337875 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 338059 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 338065 1 C T scaffold8604 Both SNP 0010.scaffold00043 338266 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 338372 1 T C - Both SNP 0010.scaffold00043 338416 1 C T scaffold8604 Both SNP 0010.scaffold00043 338515 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 338545 1 C A scaffold8604 ScafM INDEL 0010.scaffold00043 338546 3 ... AAG scaffold8604 Both SNP 0010.scaffold00043 338625 1 C T scaffold8604 Both SNP 0010.scaffold00043 338631 1 T A scaffold8604 Both SNP 0010.scaffold00043 338652 1 C T scaffold8604 Both SNP 0010.scaffold00043 338687 1 G A scaffold8604 Both SNP 0010.scaffold00043 338761 1 T A scaffold8604 Both SNP 0010.scaffold00043 338812 1 T A scaffold8604 Both SNP 0010.scaffold00043 338828 1 G A scaffold8604 ReadM SNP 0010.scaffold00043 338876 1 C A - ReadM SNP 0010.scaffold00043 338945 1 C A - ReadM SNP 0010.scaffold00043 338957 1 A G - ScafM SNP 0010.scaffold00043 339152 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 339181 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 339345 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 339348 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 339410 3 ... AGG scaffold8604 ScafM SNP 0010.scaffold00043 339413 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 339414 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 339765 2 CG AA scaffold8604 ScafM SNP 0010.scaffold00043 339918 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 339926 1 T G scaffold8604 Both SNP 0010.scaffold00043 340020 1 T A scaffold8604 Both SNP 0010.scaffold00043 340092 1 A G scaffold8604 Both SNP 0010.scaffold00043 340195 1 G A scaffold8604 Both SNP 0010.scaffold00043 340252 1 T A scaffold8604 Both SNP 0010.scaffold00043 340318 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 340573 1 A T scaffold8604 ReadM SNP 0010.scaffold00043 340832 1 G A - ReadM SNP 0010.scaffold00043 340849 1 C T - Both SNP 0010.scaffold00043 344907 1 G C scaffold8604 Both SNP 0010.scaffold00043 344913 1 T C scaffold8604 Both SNP 0010.scaffold00043 344938 1 T C scaffold8604 Both SNP 0010.scaffold00043 345092 1 T C scaffold8604 Both SNP 0010.scaffold00043 345113 1 T C scaffold8604 Both SNP 0010.scaffold00043 345178 1 T C scaffold8604 Both SNP 0010.scaffold00043 345202 1 A T scaffold8604 Both SNP 0010.scaffold00043 345470 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 345527 1 G A scaffold8604 Both SNP 0010.scaffold00043 345566 1 C T scaffold8604 Both SNP 0010.scaffold00043 345662 1 C T scaffold8604 Both SNP 0010.scaffold00043 346091 1 A T scaffold8604 Both SNP 0010.scaffold00043 346101 1 A T scaffold8604 Both INDEL 0010.scaffold00043 346122 1 . T scaffold8604 Both SNP 0010.scaffold00043 346196 1 G A scaffold8604 Both INDEL 0010.scaffold00043 346205 1 . G scaffold8604 ScafM SNP 0010.scaffold00043 346232 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 346253 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 346260 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 346262 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 346270 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 346277 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 346290 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 346297 9 ......... GTGTTTTTT scaffold8604 ScafM INDEL 0010.scaffold00043 346304 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 346351 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 346356 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 346358 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 346365 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 346562 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 346563 1 . G scaffold8604 ScafM INDEL 0010.scaffold00043 346586 1 G . scaffold8604 ScafM INDEL 0010.scaffold00043 346613 8 ........ TACTTGTA scaffold8604 ScafM INDEL 0010.scaffold00043 346616 1 . C scaffold8604 ScafM SNP 0010.scaffold00043 346635 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 346637 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 346660 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 346666 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 346673 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 346679 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 346684 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 346696 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 346698 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 346710 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 346726 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 346731 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 346735 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 346737 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 346749 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 346756 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 346762 2 AC CT scaffold8604 ScafM SNP 0010.scaffold00043 346779 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 346794 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 346797 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 347476 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 347573 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 347897 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 347932 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 347937 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 347948 1 G C scaffold8604 ScafM INDEL 0010.scaffold00043 347981 2 .. AA scaffold8604 ScafM SNP 0010.scaffold00043 347983 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 348018 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 348021 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 348033 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 348047 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 348062 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 348070 1 G C scaffold8604 ScafM INDEL 0010.scaffold00043 348081 2 TT .G scaffold8604 ScafM SNP 0010.scaffold00043 348085 1 G T scaffold8604 ScafM INDEL 0010.scaffold00043 348089 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 348104 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 348117 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 348141 5 ATTAA ..... scaffold8604 ScafM SNP 0010.scaffold00043 348187 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 348190 1 T G scaffold8604 ScafM INDEL 0010.scaffold00043 348192 2 TG .. scaffold8604 ScafM INDEL 0010.scaffold00043 348196 3 TTT ... scaffold8604 ScafM SNP 0010.scaffold00043 348200 1 C A scaffold8604 ScafM INDEL 0010.scaffold00043 348204 1 A . scaffold8604 ScafM INDEL 0010.scaffold00043 348245 4 TATC .... scaffold8604 ScafM SNP 0010.scaffold00043 348253 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 348267 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 348301 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 348333 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 348336 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 349015 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 349089 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 349126 3 TAT ... scaffold8604 ScafM SNP 0010.scaffold00043 349136 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 349149 2 GC .. scaffold8604 ScafM SNP 0010.scaffold00043 349152 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 349278 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 349283 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 349289 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 349585 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 349597 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 349598 2 .. TA scaffold8604 ScafM INDEL 0010.scaffold00043 349635 3 ... ATT scaffold8604 ScafM INDEL 0010.scaffold00043 349639 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 349701 7 ....... AGCCCAT scaffold8604 ScafM SNP 0010.scaffold00043 349713 1 C G scaffold8604 ScafM INDEL 0010.scaffold00043 350106 1 . T scaffold8604 ScafM INDEL 0010.scaffold00043 350112 2 GG .. scaffold8604 ScafM SNP 0010.scaffold00043 350147 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 350168 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 350193 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 350199 2 TA GT scaffold8604 ScafM SNP 0010.scaffold00043 350226 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 350238 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 350268 2 AG GA scaffold8604 Both SNP 0010.scaffold00043 350617 1 C T scaffold8604 Both SNP 0010.scaffold00043 350657 1 T C scaffold8604 Both INDEL 0010.scaffold00043 350707 1 A . scaffold8604 ScafM INDEL 0010.scaffold00043 350752 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 350754 5 AATGG GTCAC scaffold8604 ScafM SNP 0010.scaffold00043 350774 1 T G scaffold8604 ReadM SNP 0010.scaffold00043 351054 1 G A - ReadM SNP 0010.scaffold00043 351103 1 T G - ReadM SNP 0010.scaffold00043 351137 1 C T - ReadM INDEL 0010.scaffold00043 351215 1 . A - Both SNP 0010.scaffold00043 351305 1 A C scaffold8604 Both SNP 0010.scaffold00043 351613 1 C T scaffold8604 Both SNP 0010.scaffold00043 351674 1 C G scaffold8604 Both SNP 0010.scaffold00043 351686 1 G A scaffold8604 Both SNP 0010.scaffold00043 351703 1 A C scaffold8604 ReadM SNP 0010.scaffold00043 351790 1 C T - ReadM SNP 0010.scaffold00043 351832 1 C T - ReadM SNP 0010.scaffold00043 351845 1 T C - ReadM INDEL 0010.scaffold00043 351950 2 AA .. - ScafM INDEL 0010.scaffold00043 351979 1 . T scaffold8604 ScafM INDEL 0010.scaffold00043 351991 2 TA .. scaffold8604 Both INDEL 0010.scaffold00043 352231 1 . T scaffold8604 ScafM INDEL 0010.scaffold00043 352653 1 T . scaffold8604 ScafM INDEL 0010.scaffold00043 352890 3 ATT ... scaffold8604 ScafM SNP 0010.scaffold00043 352926 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 353248 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 353339 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 354398 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 354409 1 T A scaffold8604 ScafM INDEL 0010.scaffold00043 354452 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 354459 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 354485 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 354517 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 354545 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 354548 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 354564 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 354572 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 354585 8 TCATCAAT ........ scaffold8604 ScafM SNP 0010.scaffold00043 354619 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 354737 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 354741 8 GTGCTAAT ........ scaffold8604 ScafM INDEL 0010.scaffold00043 354771 4 TCCG .... scaffold8604 ScafM INDEL 0010.scaffold00043 354880 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 354977 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 354996 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 355031 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 355042 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 355060 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 355071 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 355130 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 355142 4 ATAA .... scaffold8604 ScafM SNP 0010.scaffold00043 355157 2 AT CC scaffold8604 ScafM SNP 0010.scaffold00043 355188 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 355197 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 355209 2 GT AC scaffold8604 ScafM SNP 0010.scaffold00043 355220 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 355222 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 355225 1 T A scaffold8604 ScafM INDEL 0010.scaffold00043 355233 3 ... ATT scaffold8604 ScafM SNP 0010.scaffold00043 355251 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 355254 1 C A scaffold8604 ScafM INDEL 0010.scaffold00043 355758 8 TCTTAGAA ........ scaffold8604 ScafM INDEL 0010.scaffold00043 355790 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 355802 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 355831 1 T A scaffold8604 ScafM INDEL 0010.scaffold00043 355861 1 T . scaffold8604 ScafM INDEL 0010.scaffold00043 355865 1 . T scaffold8604 Both SNP 0010.scaffold00043 355945 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 356304 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 356400 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 356402 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 356423 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 356454 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 356480 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 356920 3 AAA ... scaffold8604 ScafM INDEL 0010.scaffold00043 357002 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 357087 1 T C scaffold8604 Both SNP 0010.scaffold00043 357107 1 C T scaffold8604 Both SNP 0010.scaffold00043 357121 1 C T scaffold8604 Both SNP 0010.scaffold00043 357160 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 357305 7 TTTTTTG ....... scaffold8604 ScafM SNP 0010.scaffold00043 357324 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 357327 2 GA .. scaffold8604 ScafM SNP 0010.scaffold00043 357330 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 357332 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 357339 1 A C scaffold8604 ReadM SNP 0010.scaffold00043 357519 1 T C - ScafM SNP 0010.scaffold00043 357519 2 TT CC scaffold8604 ScafM INDEL 0010.scaffold00043 357671 3 TTG ... scaffold8604 ReadM INDEL 0010.scaffold00043 357690 1 T . - ScafM INDEL 0010.scaffold00043 357690 2 TC .A scaffold8604 Both SNP 0010.scaffold00043 357800 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 357871 2 TA .. scaffold8604 ScafM INDEL 0010.scaffold00043 357874 3 ATA ..G scaffold8604 ScafM SNP 0010.scaffold00043 357881 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 357886 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 357898 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 357922 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 357925 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 357940 1 A G scaffold8604 Both SNP 0010.scaffold00043 357984 1 G A scaffold8604 Both INDEL 0010.scaffold00043 357999 1 . T scaffold8604 Both SNP 0010.scaffold00043 358046 1 C G scaffold8604 Both SNP 0010.scaffold00043 358048 1 T A scaffold8604 Both SNP 0010.scaffold00043 358141 1 T G scaffold8604 ScafM INDEL 0010.scaffold00043 358167 4 ATGT .... scaffold8604 Both SNP 0010.scaffold00043 358259 1 T C scaffold8604 Both SNP 0010.scaffold00043 358274 1 A G scaffold8604 Both SNP 0010.scaffold00043 358320 1 C T scaffold8604 Both SNP 0010.scaffold00043 358341 1 G A scaffold8604 Both SNP 0010.scaffold00043 358384 1 C T scaffold8604 Both SNP 0010.scaffold00043 358430 1 T G scaffold8604 Both SNP 0010.scaffold00043 358487 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 358724 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 358750 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 358758 1 A G scaffold8604 Both SNP 0010.scaffold00043 358797 1 C A scaffold8604 Both SNP 0010.scaffold00043 358809 1 C G scaffold8604 Both SNP 0010.scaffold00043 358966 1 T C scaffold8604 Both SNP 0010.scaffold00043 358999 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 359234 1 A G - ReadM SNP 0010.scaffold00043 359252 1 G A - ScafM SNP 0010.scaffold00043 359990 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 360097 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 360124 1 G T scaffold8604 ScafM INDEL 0010.scaffold00043 360128 2 TT .. scaffold8604 ScafM INDEL 0010.scaffold00043 360154 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 360380 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 360382 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 360447 1 A T - ReadM SNP 0010.scaffold00043 360510 1 G A - Both SNP 0010.scaffold00043 360668 1 C A scaffold8604 ReadM SNP 0010.scaffold00043 360842 1 C T - ScafM SNP 0010.scaffold00043 361202 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361262 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 361273 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361283 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361335 1 G A scaffold8604 ReadM SNP 0010.scaffold00043 361403 1 C T - ReadM SNP 0010.scaffold00043 361423 1 G A - ReadM SNP 0010.scaffold00043 361474 1 A G - ReadM INDEL 0010.scaffold00043 361528 1 . A - ScafM SNP 0010.scaffold00043 361611 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361661 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 361671 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361678 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 361680 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 361689 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 361696 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 361699 1 . A scaffold8604 ScafM INDEL 0010.scaffold00043 361706 3 ... GAG scaffold8604 ScafM SNP 0010.scaffold00043 361718 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361734 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361755 1 C G scaffold8604 ScafM SNP 0010.scaffold00043 361758 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361771 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361774 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 361775 2 .. AA scaffold8604 ScafM SNP 0010.scaffold00043 361776 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361787 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 361801 3 GAG ... scaffold8604 ScafM INDEL 0010.scaffold00043 361806 5 AAATG ..... scaffold8604 ScafM SNP 0010.scaffold00043 361835 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 361844 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361861 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361866 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 361895 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361905 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361911 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361941 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 361951 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 361959 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361961 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361977 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 361991 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 361997 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 362004 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 362009 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 362016 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 362038 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 362040 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 362047 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 362057 1 C G scaffold8604 ScafM INDEL 0010.scaffold00043 362061 1 . C scaffold8604 ScafM SNP 0010.scaffold00043 362064 2 GT TC scaffold8604 ScafM SNP 0010.scaffold00043 362068 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 362078 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 362431 3 ... ATA scaffold8604 ScafM SNP 0010.scaffold00043 362473 1 G A scaffold8604 Both INDEL 0010.scaffold00043 362543 1 . C scaffold8604 ScafM SNP 0010.scaffold00043 363178 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 363201 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 363283 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 363332 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 363414 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 363433 1 A G scaffold8604 Both SNP 0010.scaffold00043 363944 1 T C scaffold8604 Both SNP 0010.scaffold00043 364018 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 364126 1 . G scaffold8604 ScafM SNP 0010.scaffold00043 364294 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 364364 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 364374 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 364414 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 364458 4 TATA .... scaffold8604 ScafM SNP 0010.scaffold00043 364587 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 364594 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 364603 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 364628 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 364636 8 TCTTTACC ........ scaffold8604 ScafM SNP 0010.scaffold00043 364679 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 364687 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 364937 1 A G scaffold8604 Both SNP 0010.scaffold00043 365158 1 C T scaffold8604 Both INDEL 0010.scaffold00043 365548 2 .. AA scaffold8604 Both SNP 0010.scaffold00043 365661 1 T A scaffold8604 Both SNP 0010.scaffold00043 365776 1 A T scaffold8604 Both SNP 0010.scaffold00043 365804 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 365818 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 365834 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 365889 1 C G scaffold8604 ScafM SNP 0010.scaffold00043 365903 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 365905 1 T G scaffold8604 Both SNP 0010.scaffold00043 365928 1 A C scaffold8604 ReadM SNP 0010.scaffold00043 365952 1 T C - ReadM SNP 0010.scaffold00043 366261 1 A G - Both SNP 0010.scaffold00043 366303 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 366367 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 366377 1 T C scaffold8604 Both INDEL 0010.scaffold00043 366498 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 366566 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 366577 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 366585 2 .. AT scaffold8604 ScafM SNP 0010.scaffold00043 366595 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 366625 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 366823 7 GATTTAG ....... scaffold8604 ScafM SNP 0010.scaffold00043 366842 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 366850 4 .... TAAT scaffold8604 ScafM SNP 0010.scaffold00043 366855 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 366881 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 366913 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 367043 2 CG TA scaffold8604 ScafM SNP 0010.scaffold00043 367054 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 367064 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 367082 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 367086 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 367092 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 367096 1 C T scaffold8604 Both SNP 0010.scaffold00043 367138 1 C T scaffold8604 Both SNP 0010.scaffold00043 367194 1 A T scaffold8604 Both SNP 0010.scaffold00043 367220 1 G A scaffold8604 Both SNP 0010.scaffold00043 367294 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 367298 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 367305 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 367314 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 367699 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 368022 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 368556 1 C T scaffold8604 Both INDEL 0010.scaffold00043 368613 1 T . scaffold8604 Both SNP 0010.scaffold00043 368962 1 T C scaffold8604 Both SNP 0010.scaffold00043 368968 1 T C scaffold8604 Both SNP 0010.scaffold00043 369294 1 A G scaffold8604 Both SNP 0010.scaffold00043 369345 1 A G scaffold8604 Both SNP 0010.scaffold00043 369360 1 C T scaffold8604 Both SNP 0010.scaffold00043 369440 1 C T scaffold8604 Both SNP 0010.scaffold00043 369502 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 369527 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 369530 1 A G scaffold8604 Both SNP 0010.scaffold00043 369715 1 A C scaffold8604 Both SNP 0010.scaffold00043 369741 1 T C scaffold8604 Both SNP 0010.scaffold00043 370363 1 T C scaffold8604 Both SNP 0010.scaffold00043 370392 1 T C scaffold8604 Both SNP 0010.scaffold00043 371148 1 C T scaffold8604 Both SNP 0010.scaffold00043 371154 1 C T scaffold8604 ReadM SNP 0010.scaffold00043 371851 1 A G - ReadM SNP 0010.scaffold00043 372369 1 C T - Both SNP 0010.scaffold00043 372690 1 A G scaffold8604 Both SNP 0010.scaffold00043 372774 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 372839 4 .... CAAA scaffold8604 Both SNP 0010.scaffold00043 373080 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 373098 2 AC GA scaffold8604 ScafM SNP 0010.scaffold00043 373113 2 TT CC scaffold8604 ScafM SNP 0010.scaffold00043 373118 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 373134 16 ................ AGTGGATTTCTGTTTA scaffold8604 ScafM SNP 0010.scaffold00043 373156 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 373159 1 T . scaffold8604 Both SNP 0010.scaffold00043 373179 1 T C scaffold8604 Both SNP 0010.scaffold00043 373206 1 A G scaffold8604 Both SNP 0010.scaffold00043 373331 1 G A scaffold8604 Both SNP 0010.scaffold00043 373338 1 A G scaffold8604 Both INDEL 0010.scaffold00043 373398 1 T . scaffold8604 Both SNP 0010.scaffold00043 373498 1 A C scaffold8604 Both SNP 0010.scaffold00043 373567 1 A G scaffold8604 Both INDEL 0010.scaffold00043 373592 1 . C scaffold8604 Both SNP 0010.scaffold00043 373637 1 G C scaffold8604 Both SNP 0010.scaffold00043 373646 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 373699 11 AAGCTAATATC ........... scaffold8604 ScafM INDEL 0010.scaffold00043 373712 1 C . scaffold8604 Both SNP 0010.scaffold00043 373808 1 C G scaffold8604 Both SNP 0010.scaffold00043 373811 1 A C scaffold8604 Both SNP 0010.scaffold00043 373833 1 A G scaffold8604 Both INDEL 0010.scaffold00043 374013 3 ... GAG scaffold8604 Both SNP 0010.scaffold00043 374231 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 374258 2 CT GC scaffold8604 Both SNP 0010.scaffold00043 374282 1 C A scaffold8604 ReadM SNP 0010.scaffold00043 374298 1 A G - ReadM SNP 0010.scaffold00043 374397 1 C T - ScafM INDEL 0010.scaffold00043 375316 1 T . scaffold8604 Both SNP 0010.scaffold00043 375368 1 G A scaffold8604 Both SNP 0010.scaffold00043 375436 1 A G scaffold8604 Both SNP 0010.scaffold00043 375502 1 A G scaffold8604 Both SNP 0010.scaffold00043 375517 1 G A scaffold8604 Both SNP 0010.scaffold00043 375538 1 T C scaffold8604 Both SNP 0010.scaffold00043 375592 1 G A scaffold8604 Both SNP 0010.scaffold00043 375799 1 T A scaffold8604 Both SNP 0010.scaffold00043 376415 1 A C scaffold8604 Both SNP 0010.scaffold00043 376482 1 G A scaffold8604 Both SNP 0010.scaffold00043 376512 1 A G scaffold8604 Both SNP 0010.scaffold00043 376571 1 T G scaffold8604 ScafM INDEL 0010.scaffold00043 376646 4 .... AGAC scaffold8604 ScafM SNP 0010.scaffold00043 376713 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 376727 11 AACATTTACAC ........... scaffold8604 Both SNP 0010.scaffold00043 376995 1 G A scaffold8604 Both INDEL 0010.scaffold00043 377000 2 .. AT scaffold8604 Both INDEL 0010.scaffold00043 377164 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 377624 1 G A scaffold8604 ReadM SNP 0010.scaffold00043 378505 1 A G - ReadM SNP 0010.scaffold00043 378810 1 T A - ReadM SNP 0010.scaffold00043 378814 1 C T - ReadM SNP 0010.scaffold00043 379037 1 C T - ScafM SNP 0010.scaffold00043 379878 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 379887 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 379946 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 379951 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 380569 4 ATCG .... scaffold8604 ScafM SNP 0010.scaffold00043 380591 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 380598 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 380606 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 380685 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 380759 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 380898 1 C T - ReadM SNP 0010.scaffold00043 380919 1 T A - ScafM SNP 0010.scaffold00043 381114 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 381920 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 381923 1 G . scaffold8604 ScafM INDEL 0010.scaffold00043 381926 1 A . scaffold8604 ScafM INDEL 0010.scaffold00043 381962 7 ....... ACTTGTG scaffold8604 ScafM SNP 0010.scaffold00043 381991 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 382003 8 ATATTAGT ........ scaffold8604 ScafM INDEL 0010.scaffold00043 382041 2 AA .. scaffold8604 Both SNP 0010.scaffold00043 382410 1 A G scaffold8604 Both SNP 0010.scaffold00043 382567 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 382577 2 AT GC scaffold8604 Both SNP 0010.scaffold00043 382700 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 382733 15 ............... TCGGTTTGACATTAT scaffold8604 ScafM SNP 0010.scaffold00043 382766 1 C G scaffold8604 Both SNP 0010.scaffold00043 382791 1 T A scaffold8604 Both SNP 0010.scaffold00043 382817 1 G T scaffold8604 Both SNP 0010.scaffold00043 382833 1 T G scaffold8604 Both SNP 0010.scaffold00043 382891 1 T C scaffold8604 Both SNP 0010.scaffold00043 383022 1 G A scaffold8604 Both SNP 0010.scaffold00043 383093 1 C G scaffold8604 Both INDEL 0010.scaffold00043 383098 2 AT .. scaffold8604 ScafM SNP 0010.scaffold00043 383181 2 TT GC scaffold8604 Both SNP 0010.scaffold00043 383316 1 T C scaffold8604 Both SNP 0010.scaffold00043 383328 1 C A scaffold8604 Both SNP 0010.scaffold00043 383348 1 G T scaffold8604 Both SNP 0010.scaffold00043 383358 1 G T scaffold8604 Both SNP 0010.scaffold00043 383511 1 A G scaffold8604 Both SNP 0010.scaffold00043 383526 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 383639 7 ....... TGAGTAG scaffold8604 ScafM SNP 0010.scaffold00043 383651 2 TG CA scaffold8604 Both SNP 0010.scaffold00043 383699 1 G A scaffold8604 Both SNP 0010.scaffold00043 383719 1 A G scaffold8604 Both SNP 0010.scaffold00043 384035 1 A G scaffold8604 Both SNP 0010.scaffold00043 384079 1 C T scaffold8604 Both SNP 0010.scaffold00043 384109 1 A T scaffold8604 ScafM INDEL 0010.scaffold00043 384160 4 .... AGTT scaffold8604 ScafM SNP 0010.scaffold00043 384199 1 A G scaffold8604 Both SNP 0010.scaffold00043 384229 1 C A scaffold8604 ReadM SNP 0010.scaffold00043 384309 1 A G - ReadM SNP 0010.scaffold00043 384343 1 C T - ScafM INDEL 0010.scaffold00043 384573 5 CTTTT ..... scaffold8604 ScafM SNP 0010.scaffold00043 384595 1 G A scaffold8604 ScafM INDEL 0010.scaffold00043 384634 7 GGGGGGG ....... scaffold8604 Both SNP 0010.scaffold00043 384680 1 A T scaffold8604 Both SNP 0010.scaffold00043 384738 1 T C scaffold8604 Both SNP 0010.scaffold00043 384789 1 G A scaffold8604 Both SNP 0010.scaffold00043 384791 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 384907 1 A G scaffold8604 Both INDEL 0010.scaffold00043 385247 2 .. CA scaffold8604 Both SNP 0010.scaffold00043 385391 1 T C scaffold8604 Both SNP 0010.scaffold00043 385396 1 A G scaffold8604 Both SNP 0010.scaffold00043 385405 1 A G scaffold8604 Both SNP 0010.scaffold00043 385452 1 T C scaffold8604 Both SNP 0010.scaffold00043 385479 1 G T scaffold8604 Both SNP 0010.scaffold00043 385550 1 T G scaffold8604 Both SNP 0010.scaffold00043 385568 1 T C scaffold8604 Both INDEL 0010.scaffold00043 385581 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 385604 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 385641 2 CC TG scaffold8604 ReadM SNP 0010.scaffold00043 385642 1 C G - Both SNP 0010.scaffold00043 385691 1 T C scaffold8604 Both SNP 0010.scaffold00043 385786 1 G A scaffold8604 Both SNP 0010.scaffold00043 385908 1 G A scaffold8604 Both SNP 0010.scaffold00043 386010 1 T C scaffold8604 Both SNP 0010.scaffold00043 386104 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 386123 2 GA TG scaffold8604 ScafM SNP 0010.scaffold00043 386130 1 A T scaffold8604 Both INDEL 0010.scaffold00043 386559 3 CTG ... scaffold8604 Both SNP 0010.scaffold00043 386726 1 T A scaffold8604 Both SNP 0010.scaffold00043 386731 1 G T scaffold8604 Both SNP 0010.scaffold00043 386820 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 386843 1 T G scaffold8604 ScafM INDEL 0010.scaffold00043 386845 4 ATAT .... scaffold8604 ScafM INDEL 0010.scaffold00043 386850 4 CATC .... scaffold8604 Both SNP 0010.scaffold00043 387017 1 A T scaffold8604 Both INDEL 0010.scaffold00043 387145 1 T . scaffold8604 Both SNP 0010.scaffold00043 387217 1 A G scaffold8604 ReadM SNP 0010.scaffold00043 387538 1 A G - ReadM SNP 0010.scaffold00043 387643 1 C T - ReadM SNP 0010.scaffold00043 387648 1 A G - Both SNP 0010.scaffold00043 387783 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 387829 1 T C scaffold8604 Both INDEL 0010.scaffold00043 387929 1 . T scaffold8604 Both SNP 0010.scaffold00043 388009 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 388055 6 CATGAA ...... scaffold8604 ReadM SNP 0010.scaffold00043 388058 1 G T - ScafM INDEL 0010.scaffold00043 388075 2 TC .. scaffold8604 ScafM INDEL 0010.scaffold00043 388079 1 C . scaffold8604 ScafM INDEL 0010.scaffold00043 388081 1 C . scaffold8604 ScafM SNP 0010.scaffold00043 388159 2 CG AA scaffold8604 ScafM SNP 0010.scaffold00043 388170 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 388180 1 A G scaffold8604 Both SNP 0010.scaffold00043 388214 1 A G scaffold8604 Both SNP 0010.scaffold00043 388230 1 A T scaffold8604 Both SNP 0010.scaffold00043 388276 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 388310 2 TG AA scaffold8604 ScafM SNP 0010.scaffold00043 388321 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 388368 1 A T scaffold8604 Both SNP 0010.scaffold00043 388501 1 A C scaffold8604 ScafM INDEL 0010.scaffold00043 388563 13 ............. GTAATGGTACTAA scaffold8604 Both SNP 0010.scaffold00043 388598 1 A T scaffold8604 ReadM SNP 0010.scaffold00043 388642 1 C G - Both SNP 0010.scaffold00043 388763 1 T C scaffold8604 Both SNP 0010.scaffold00043 388782 1 C T scaffold8604 Both SNP 0010.scaffold00043 388797 1 T G scaffold8604 Both SNP 0010.scaffold00043 388847 1 G A scaffold8604 Both SNP 0010.scaffold00043 388993 1 T C scaffold8604 Both SNP 0010.scaffold00043 389001 1 G A scaffold8604 Both SNP 0010.scaffold00043 389010 1 G A scaffold8604 Both SNP 0010.scaffold00043 389058 1 A G scaffold8604 Both SNP 0010.scaffold00043 389105 1 A G scaffold8604 Both SNP 0010.scaffold00043 389269 1 C T scaffold8604 Both SNP 0010.scaffold00043 389466 1 T A scaffold8604 Both SNP 0010.scaffold00043 389481 1 G A scaffold8604 Both SNP 0010.scaffold00043 389610 1 T A scaffold8604 Both SNP 0010.scaffold00043 389699 1 G A scaffold8604 Both INDEL 0010.scaffold00043 389704 1 A . scaffold8604 Both SNP 0010.scaffold00043 389783 1 T C scaffold8604 Both SNP 0010.scaffold00043 389816 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 389827 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 389857 1 A . scaffold8604 ScafM SNP 0010.scaffold00043 390009 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 390010 2 .. AG scaffold8604 ScafM SNP 0010.scaffold00043 390043 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 390069 4 .... ATAA scaffold8604 ScafM SNP 0010.scaffold00043 390078 1 A G scaffold8604 Both SNP 0010.scaffold00043 390239 1 G C scaffold8604 Both INDEL 0010.scaffold00043 390265 1 T . scaffold8604 ScafM SNP 0010.scaffold00043 390425 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 390465 2 CT AG scaffold8604 ScafM SNP 0010.scaffold00043 390478 2 TT AC scaffold8604 ScafM INDEL 0010.scaffold00043 390494 3 TAC ... scaffold8604 ScafM SNP 0010.scaffold00043 390505 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 390627 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 390631 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 390636 3 ... AAA scaffold8604 ScafM SNP 0010.scaffold00043 390650 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 390677 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 390689 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 390699 1 A T scaffold8604 Both SNP 0010.scaffold00043 390979 1 T C scaffold8604 Both SNP 0010.scaffold00043 391351 1 C A scaffold8604 Both SNP 0010.scaffold00043 391396 1 T G scaffold8604 Both SNP 0010.scaffold00043 391600 1 A G scaffold8604 Both SNP 0010.scaffold00043 391738 1 C G scaffold8604 Both SNP 0010.scaffold00043 391862 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 391892 2 AG GA scaffold8604 ReadM SNP 0010.scaffold00043 391964 1 T C - ScafM SNP 0010.scaffold00043 392637 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 392641 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 392687 2 CA AG scaffold8604 ReadM SNP 0010.scaffold00043 393231 1 C T - ReadM SNP 0010.scaffold00043 393289 1 C G - ReadM SNP 0010.scaffold00043 393343 1 G A - ReadM SNP 0010.scaffold00043 393362 1 T G - Both SNP 0010.scaffold00043 393491 1 T G scaffold8604 Both SNP 0010.scaffold00043 393541 1 T A scaffold8604 ReadM SNP 0010.scaffold00043 393688 1 A G - ReadM SNP 0010.scaffold00043 393691 1 A G - ReadM SNP 0010.scaffold00043 393787 1 G A - ReadM SNP 0010.scaffold00043 394055 1 A G - ReadM SNP 0010.scaffold00043 394212 1 T G - ReadM SNP 0010.scaffold00043 394288 1 C T - Both SNP 0010.scaffold00043 394523 1 A G scaffold8604 Both SNP 0010.scaffold00043 394618 1 C G scaffold8604 Both SNP 0010.scaffold00043 394662 1 T C scaffold8604 Both SNP 0010.scaffold00043 394808 1 T A scaffold8604 Both SNP 0010.scaffold00043 394858 1 T C scaffold8604 Both SNP 0010.scaffold00043 394888 1 C T scaffold8604 Both SNP 0010.scaffold00043 394989 1 A T scaffold8604 Both SNP 0010.scaffold00043 395065 1 C A scaffold8604 Both SNP 0010.scaffold00043 395068 1 G T scaffold8604 ReadM SNP 0010.scaffold00043 395196 1 A G - Both SNP 0010.scaffold00043 395367 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 395399 1 C T scaffold8604 Both SNP 0010.scaffold00043 395406 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 395421 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 395423 1 G T scaffold8604 ScafM SNP 0010.scaffold00043 395435 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 395438 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 395441 1 A G scaffold8604 Both SNP 0010.scaffold00043 395486 1 T C scaffold8604 Both SNP 0010.scaffold00043 395537 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 395624 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 395627 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 395630 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 395653 2 TC CT scaffold8604 ScafM SNP 0010.scaffold00043 395661 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 395675 2 TC CA scaffold8604 ScafM SNP 0010.scaffold00043 395690 1 A G scaffold8604 ScafM SNP 0010.scaffold00043 395711 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 395726 4 .... GTAT scaffold8604 ScafM INDEL 0010.scaffold00043 395735 2 .. AT scaffold8604 ScafM SNP 0010.scaffold00043 395743 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 395759 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 395816 8 ........ ACAGTAGC scaffold8604 ScafM INDEL 0010.scaffold00043 395824 1 G . scaffold8604 ScafM INDEL 0010.scaffold00043 395834 3 TAG ... scaffold8604 ScafM SNP 0010.scaffold00043 395994 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 396000 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 396025 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 396054 1 A T scaffold8604 ScafM SNP 0010.scaffold00043 396072 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 396115 1 T G scaffold8604 ScafM SNP 0010.scaffold00043 396195 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 397372 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 397374 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 397443 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 397465 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 397471 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 397480 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 397488 1 A C scaffold8604 ScafM SNP 0010.scaffold00043 397508 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 397533 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 397535 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 397537 1 A G scaffold8604 ScafM INDEL 0010.scaffold00043 397561 1 . T scaffold8604 ReadM SNP 0010.scaffold00043 397593 1 G A - ReadM INDEL 0010.scaffold00043 397605 1 . T - Both SNP 0010.scaffold00043 397643 1 T C scaffold8604 ScafM INDEL 0010.scaffold00043 397724 51 TGAATTGGAGTAAAGATAATGGTAATTTTAAGGTGTTTGATACTTCTCCTG ................................................... scaffold8604 ScafM INDEL 0010.scaffold00043 397778 9 TTGCGCAAG ......... scaffold8604 ScafM INDEL 0010.scaffold00043 397845 1 G . scaffold8604 ScafM INDEL 0010.scaffold00043 397928 1 . A scaffold8604 ScafM SNP 0010.scaffold00043 397947 1 G C scaffold8604 ScafM SNP 0010.scaffold00043 398020 2 CA TC scaffold8604 ScafM INDEL 0010.scaffold00043 398029 9 CAATCCCAC ......... scaffold8604 ScafM INDEL 0010.scaffold00043 398059 1 C . scaffold8604 ScafM INDEL 0010.scaffold00043 398061 1 A . scaffold8604 ScafM INDEL 0010.scaffold00043 398063 1 C . scaffold8604 ScafM INDEL 0010.scaffold00043 398093 1 . A scaffold8604 Both SNP 0010.scaffold00043 407226 1 T A scaffold8604 ScafM SNP 0010.scaffold00043 409706 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 409708 1 C A scaffold8604 ScafM SNP 0010.scaffold00043 409712 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 409724 1 G A scaffold8604 ScafM SNP 0010.scaffold00043 409728 1 C T scaffold8604 ScafM SNP 0010.scaffold00043 409733 1 C T scaffold8604 ScafM INDEL 0010.scaffold00043 409751 1 . T scaffold8604 ScafM SNP 0010.scaffold00043 409753 1 T C scaffold8604 ScafM SNP 0010.scaffold00043 409777 2 TA AT scaffold8604 ScafM SNP 0010.scaffold00043 409781 1 G A scaffold8604 ScafM SNP 0011.scaffold00043 144 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 149 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 325 1 A G scaffold16348 Both SNP 0011.scaffold00043 513 1 A G scaffold16348 Both SNP 0011.scaffold00043 570 1 T G scaffold16348 Both SNP 0011.scaffold00043 676 1 C T scaffold16348 Both SNP 0011.scaffold00043 748 1 A G scaffold16348 Both SNP 0011.scaffold00043 936 1 T G scaffold16348 ReadM SNP 0011.scaffold00043 1224 1 A G - ReadM SNP 0011.scaffold00043 1384 1 T C - ReadM SNP 0011.scaffold00043 1473 1 C T - ReadM SNP 0011.scaffold00043 1494 1 C A - ReadM SNP 0011.scaffold00043 1635 1 C A - ScafM SNP 0011.scaffold00043 1665 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 1672 2 CC TT scaffold16348 ScafM SNP 0011.scaffold00043 1741 3 AAA TTT scaffold16348 ScafM SNP 0011.scaffold00043 2402 1 T C scaffold3748 ScafM SNP 0011.scaffold00043 2424 1 A G scaffold3748 ScafM SNP 0011.scaffold00043 2490 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 2785 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 2826 1 C G scaffold16348 ScafM SNP 0011.scaffold00043 2829 2 TG CT scaffold16348 ScafM SNP 0011.scaffold00043 2848 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 2870 1 A C scaffold16348 ScafM INDEL 0011.scaffold00043 6614 2 CA .. scaffold16348 ScafM INDEL 0011.scaffold00043 6617 3 TTC ... scaffold16348 ScafM SNP 0011.scaffold00043 6621 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 6855 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 6864 1 T G scaffold16348 ScafM SNP 0011.scaffold00043 6872 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 6878 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 7660 1 C A scaffold16348 ScafM SNP 0011.scaffold00043 7666 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 7670 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 7695 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 7699 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 7703 1 C A scaffold16348 ScafM SNP 0011.scaffold00043 7714 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 7740 1 A G scaffold16348 ReadM SNP 0011.scaffold00043 7926 1 A G - ScafM SNP 0011.scaffold00043 8650 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 8720 1 C T scaffold16348 Both SNP 0011.scaffold00043 8950 1 A C scaffold16348 Both SNP 0011.scaffold00043 8955 1 A G scaffold16348 ReadM INDEL 0011.scaffold00043 9010 2 .. TA - ReadM INDEL 0011.scaffold00043 9016 2 .. TT - ReadM SNP 0011.scaffold00043 9066 1 G A - ScafM SNP 0011.scaffold00043 9269 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 9286 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 9447 1 A G scaffold16348 Both SNP 0011.scaffold00043 9509 1 G T scaffold16348 ScafM INDEL 0011.scaffold00043 9653 3 ... AAA scaffold16348 ScafM INDEL 0011.scaffold00043 9667 6 ...... AAACAA scaffold16348 ScafM SNP 0011.scaffold00043 9818 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 9823 14 .............. AGTTGTAAGTTGTA scaffold16348 ScafM INDEL 0011.scaffold00043 9855 3 AGT ... scaffold16348 ScafM SNP 0011.scaffold00043 9984 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 10003 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 10011 1 C . scaffold16348 ScafM INDEL 0011.scaffold00043 10013 1 A . scaffold16348 ScafM INDEL 0011.scaffold00043 10015 1 A . scaffold16348 Both SNP 0011.scaffold00043 10078 1 G T scaffold16348 Both SNP 0011.scaffold00043 10102 1 A G scaffold16348 Both SNP 0011.scaffold00043 10123 1 A G scaffold16348 ReadM INDEL 0011.scaffold00043 10397 1 T . - ScafM SNP 0011.scaffold00043 10505 1 G T scaffold16348 ScafM INDEL 0011.scaffold00043 10649 7 TAATTCA ....... scaffold16348 Both INDEL 0011.scaffold00043 10668 1 . G scaffold16348 Both SNP 0011.scaffold00043 10866 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 10897 1 A C scaffold16348 ScafM INDEL 0011.scaffold00043 10909 9 CTCTTTTTC ......... scaffold16348 ScafM SNP 0011.scaffold00043 10974 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 10987 1 C T scaffold16348 ScafM INDEL 0011.scaffold00043 11013 1 . C scaffold16348 ScafM INDEL 0011.scaffold00043 11014 4 .... AAAC scaffold16348 ScafM INDEL 0011.scaffold00043 11064 3 ACT ... scaffold16348 ScafM SNP 0011.scaffold00043 11081 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 11106 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 11110 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 11121 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 11144 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 11148 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 11156 3 ... CCA scaffold16348 ScafM SNP 0011.scaffold00043 11158 1 C T scaffold16348 ScafM INDEL 0011.scaffold00043 11173 21 AACCATCTCTGCTACTTGTAC ..................... scaffold16348 ScafM SNP 0011.scaffold00043 11227 1 T C scaffold16348 ScafM INDEL 0011.scaffold00043 11238 18 TTGTATTATGGATTCAGA .................. scaffold16348 ScafM INDEL 0011.scaffold00043 11258 3 GTC ... scaffold16348 ScafM SNP 0011.scaffold00043 11271 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 11288 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 11293 1 C G scaffold16348 ScafM SNP 0011.scaffold00043 11297 1 C G scaffold16348 Both SNP 0011.scaffold00043 11352 1 G T scaffold16348 ReadM SNP 0011.scaffold00043 11419 1 T C - ReadM SNP 0011.scaffold00043 11506 1 G A - ReadM SNP 0011.scaffold00043 11614 1 T C - ReadM INDEL 0011.scaffold00043 11633 1 . A - ReadM SNP 0011.scaffold00043 11660 1 A T - ScafM SNP 0011.scaffold00043 11697 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 11709 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 11741 1 . T scaffold16348 ScafM INDEL 0011.scaffold00043 11752 6 ...... TTTTTC scaffold16348 ScafM INDEL 0011.scaffold00043 11801 12 ............ GGGAGAGAGAGA scaffold16348 ScafM SNP 0011.scaffold00043 12028 1 T A scaffold16348 ScafM INDEL 0011.scaffold00043 12029 1 . C scaffold16348 Both SNP 0011.scaffold00043 12106 1 C T scaffold16348 Both INDEL 0011.scaffold00043 12208 1 . T scaffold16348 Both SNP 0011.scaffold00043 12240 1 T C scaffold16348 Both INDEL 0011.scaffold00043 12257 1 G . scaffold16348 ReadM SNP 0011.scaffold00043 12387 1 G T - ReadM SNP 0011.scaffold00043 12445 1 T A - Both SNP 0011.scaffold00043 12612 1 A C scaffold16348 Both INDEL 0011.scaffold00043 12662 1 T . scaffold16348 Both SNP 0011.scaffold00043 12678 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 12784 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 12833 3 TAA ATT scaffold16348 ScafM INDEL 0011.scaffold00043 12969 1 . A scaffold16348 ScafM INDEL 0011.scaffold00043 12971 2 .C AG scaffold16348 ScafM INDEL 0011.scaffold00043 12973 2 .. GA scaffold16348 ScafM INDEL 0011.scaffold00043 12977 1 . C scaffold16348 ScafM SNP 0011.scaffold00043 12979 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 12986 1 T G scaffold16348 ScafM SNP 0011.scaffold00043 13019 1 C A scaffold16348 ScafM INDEL 0011.scaffold00043 13049 39 ....................................... TTTTTTAATTTTTTTTTTTGAGGGGAAGTCATTTTAATT scaffold16348 Both SNP 0011.scaffold00043 13087 1 T A scaffold16348 Both SNP 0011.scaffold00043 13097 1 C A scaffold16348 Both INDEL 0011.scaffold00043 13209 1 . T scaffold16348 ScafM SNP 0011.scaffold00043 13315 1 T C scaffold16348 ScafM INDEL 0011.scaffold00043 13351 9 ......... ATTAGTTCT scaffold16348 Both SNP 0011.scaffold00043 13477 1 C T scaffold16348 Both SNP 0011.scaffold00043 13587 1 T C scaffold16348 Both SNP 0011.scaffold00043 13604 1 A T scaffold16348 Both SNP 0011.scaffold00043 13757 1 T C scaffold16348 Both SNP 0011.scaffold00043 13976 1 A G scaffold16348 Both SNP 0011.scaffold00043 13983 1 G A scaffold16348 Both SNP 0011.scaffold00043 14014 1 A T scaffold16348 Both SNP 0011.scaffold00043 14628 1 T G scaffold16348 Both INDEL 0011.scaffold00043 14631 1 A . scaffold16348 ScafM INDEL 0011.scaffold00043 14635 1 . T scaffold16348 Both SNP 0011.scaffold00043 14763 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 14781 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 14789 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 14793 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 14804 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 14832 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 14844 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 14856 1 C A scaffold16348 ScafM SNP 0011.scaffold00043 14891 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 14922 1 T . scaffold16348 ScafM INDEL 0011.scaffold00043 14925 7 ATGGAAT ....... scaffold16348 ScafM INDEL 0011.scaffold00043 14933 2 TG .. scaffold16348 Both INDEL 0011.scaffold00043 15074 1 G . scaffold16348 Both SNP 0011.scaffold00043 15148 1 T C scaffold16348 Both SNP 0011.scaffold00043 15177 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 15340 1 A C scaffold16348 ScafM SNP 0011.scaffold00043 15349 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15408 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 15428 1 C T scaffold16348 Both SNP 0011.scaffold00043 15473 1 G C scaffold16348 ScafM INDEL 0011.scaffold00043 15491 2 .. AT scaffold16348 Both INDEL 0011.scaffold00043 15632 1 T . scaffold16348 Both SNP 0011.scaffold00043 15640 1 C A scaffold16348 Both SNP 0011.scaffold00043 15669 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15680 2 CG TA scaffold16348 ScafM SNP 0011.scaffold00043 15694 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 15770 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15773 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 15780 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 15786 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 15802 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15817 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15819 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 15827 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 15852 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 15862 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 15886 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 15913 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 15928 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 15953 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 15965 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 15980 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 15990 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 16034 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 16062 1 C A scaffold16348 ScafM INDEL 0011.scaffold00043 16086 1 A . scaffold16348 ScafM SNP 0011.scaffold00043 16100 1 T C scaffold16348 ScafM INDEL 0011.scaffold00043 16134 3 ATC ... scaffold16348 ScafM SNP 0011.scaffold00043 16138 1 T G scaffold16348 ScafM INDEL 0011.scaffold00043 16140 1 T . scaffold16348 ScafM SNP 0011.scaffold00043 16143 2 TG AT scaffold16348 ScafM INDEL 0011.scaffold00043 16148 2 GA .C scaffold16348 ScafM SNP 0011.scaffold00043 16151 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 16153 1 T C scaffold16348 ScafM INDEL 0011.scaffold00043 16162 1 C . scaffold16348 ScafM SNP 0011.scaffold00043 16171 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 16198 1 G A scaffold16348 ScafM INDEL 0011.scaffold00043 16218 14 TTGTATGCATAAAA .............. scaffold16348 ScafM SNP 0011.scaffold00043 16246 1 C G scaffold16348 ScafM INDEL 0011.scaffold00043 16259 2 .. TA scaffold16348 ScafM SNP 0011.scaffold00043 16262 2 CC AT scaffold16348 ScafM SNP 0011.scaffold00043 16334 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 16354 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 16370 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 16383 1 T G scaffold16348 ScafM SNP 0011.scaffold00043 16408 1 G T scaffold16348 ScafM SNP 0011.scaffold00043 16417 1 G A scaffold16348 ScafM INDEL 0011.scaffold00043 16437 3 ... AGT scaffold16348 ScafM SNP 0011.scaffold00043 16495 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 16505 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 16506 1 . A scaffold16348 ScafM SNP 0011.scaffold00043 16512 2 AA TT scaffold16348 ScafM SNP 0011.scaffold00043 16516 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 16519 1 A C scaffold16348 ScafM SNP 0011.scaffold00043 16521 1 G A scaffold16348 ScafM INDEL 0011.scaffold00043 16522 2 .. AC scaffold16348 ScafM SNP 0011.scaffold00043 16524 2 TT AA scaffold16348 ScafM SNP 0011.scaffold00043 16528 1 T G scaffold16348 ScafM INDEL 0011.scaffold00043 16530 2 .. GC scaffold16348 ScafM SNP 0011.scaffold00043 16531 2 TT AC scaffold16348 ScafM SNP 0011.scaffold00043 16540 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 16553 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 16751 2 TT GA scaffold16348 ScafM INDEL 0011.scaffold00043 16757 2 CC .T scaffold16348 ScafM SNP 0011.scaffold00043 16771 1 T G scaffold16348 ScafM INDEL 0011.scaffold00043 16773 1 G . scaffold16348 ScafM SNP 0011.scaffold00043 16775 1 T G scaffold16348 ScafM SNP 0011.scaffold00043 16779 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 16785 1 C A scaffold16348 ScafM SNP 0011.scaffold00043 16806 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 16831 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 16844 1 T G scaffold16348 ScafM INDEL 0011.scaffold00043 16849 4 .... GGAT scaffold16348 ScafM INDEL 0011.scaffold00043 16850 1 . A scaffold16348 ScafM INDEL 0011.scaffold00043 16852 2 .. GG scaffold16348 ScafM SNP 0011.scaffold00043 16921 1 C T scaffold16348 Both SNP 0011.scaffold00043 17050 1 G T scaffold16348 Both INDEL 0011.scaffold00043 17101 1 G . scaffold16348 Both SNP 0011.scaffold00043 17150 1 C G scaffold16348 Both SNP 0011.scaffold00043 17168 1 G A scaffold16348 Both SNP 0011.scaffold00043 17280 1 C G scaffold16348 ScafM INDEL 0011.scaffold00043 17311 4 .... ACTC scaffold16348 ScafM SNP 0011.scaffold00043 17322 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 17371 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 17378 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 17384 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 17389 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 17405 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 17412 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 17445 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 17463 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 17479 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 17481 1 A T scaffold16348 ScafM SNP 0011.scaffold00043 17483 1 A T scaffold16348 Both INDEL 0011.scaffold00043 17649 2 .. AA scaffold16348 ScafM SNP 0011.scaffold00043 17680 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 17687 31 ATTGGGGTATTATCATAATTGGAAGAAAGAG ............................... scaffold16348 ScafM SNP 0011.scaffold00043 17733 1 G A scaffold16348 Both SNP 0011.scaffold00043 17762 1 T C scaffold16348 Both SNP 0011.scaffold00043 17772 1 C T scaffold16348 ScafM SNP 0011.scaffold00043 17881 1 A C scaffold16348 ScafM SNP 0011.scaffold00043 17896 2 CC GG scaffold16348 ScafM SNP 0011.scaffold00043 17901 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 17917 1 G T scaffold16348 ScafM INDEL 0011.scaffold00043 17931 1 . A scaffold16348 ScafM SNP 0011.scaffold00043 17957 1 C A scaffold16348 ScafM SNP 0011.scaffold00043 17973 1 A T scaffold16348 ScafM INDEL 0011.scaffold00043 17995 4 .... CTCC scaffold16348 ScafM SNP 0011.scaffold00043 18008 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 18039 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 18065 1 A C scaffold16348 ScafM SNP 0011.scaffold00043 18115 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 18126 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 18158 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 18160 1 C G scaffold16348 ScafM SNP 0011.scaffold00043 18171 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 18176 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 18185 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 18200 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 19431 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 19498 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 19527 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 19679 1 A C scaffold16348 ScafM INDEL 0011.scaffold00043 19705 14 TATACGCAAGTGAA .............. scaffold16348 ScafM SNP 0011.scaffold00043 19730 1 G C scaffold16348 ScafM SNP 0011.scaffold00043 19773 1 A C scaffold16348 ScafM SNP 0011.scaffold00043 19830 1 T C scaffold16348 ScafM SNP 0011.scaffold00043 19832 2 AA TT scaffold16348 ScafM SNP 0011.scaffold00043 19855 1 G A scaffold16348 ScafM SNP 0011.scaffold00043 19923 2 AA GG scaffold16348 ScafM SNP 0011.scaffold00043 19932 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 19939 1 A G scaffold16348 ScafM SNP 0011.scaffold00043 19949 1 A G scaffold16348 ReadM SNP 0011.scaffold00043 20023 1 C T - ReadM SNP 0011.scaffold00043 20071 1 C T - ReadM SNP 0011.scaffold00043 20142 1 A G - ReadM SNP 0011.scaffold00043 20282 1 A T - Both SNP 0011.scaffold00043 20678 1 C T scaffold16348 ReadM SNP 0011.scaffold00043 20710 1 A T - ReadM SNP 0011.scaffold00043 20798 1 G A - ReadM SNP 0011.scaffold00043 20821 1 A G - ScafM SNP 0011.scaffold00043 20847 1 T A scaffold16348 ScafM SNP 0011.scaffold00043 20864 1 A G scaffold16348 ScafM INDEL 0011.scaffold00043 20893 3 ... AAA scaffold16348 ScafM INDEL 0011.scaffold00043 21058 3 ... AGT scaffold16348 ScafM INDEL 0011.scaffold00043 21094 8 ........ TGCGTATG scaffold16348 ScafM SNP 0011.scaffold00043 21282 1 T G scaffold16348 ScafM INDEL 0011.scaffold00043 21293 1 C . scaffold16348 Both SNP 0011.scaffold00043 22118 1 C T scaffold1708 Both SNP 0011.scaffold00043 22213 1 A T scaffold1708 Both SNP 0011.scaffold00043 22287 1 C G scaffold1708 Both SNP 0011.scaffold00043 22415 1 A G scaffold1708 Both SNP 0011.scaffold00043 22575 1 T C scaffold1708 Both SNP 0011.scaffold00043 22581 1 G A scaffold1708 Both INDEL 0011.scaffold00043 22586 1 . T scaffold1708 Both SNP 0011.scaffold00043 22617 1 A G scaffold1708 Both SNP 0011.scaffold00043 22634 1 G T scaffold1708 ScafM INDEL 0011.scaffold00043 22695 12 ............ CTGAATGTGTAC scaffold1708 ScafM SNP 0011.scaffold00043 22715 1 A G scaffold1708 ScafM SNP 0011.scaffold00043 22724 1 G A scaffold1708 ScafM INDEL 0011.scaffold00043 22730 4 .... GGAG scaffold1708 ScafM INDEL 0011.scaffold00043 22733 1 T . scaffold1708 ScafM SNP 0011.scaffold00043 22739 1 C G scaffold1708 ScafM SNP 0011.scaffold00043 22742 1 C G scaffold1708 ScafM SNP 0011.scaffold00043 22763 1 G A scaffold1708 ScafM SNP 0011.scaffold00043 22777 2 TC CT scaffold1708 ScafM SNP 0011.scaffold00043 22784 1 A G scaffold1708 Both SNP 0011.scaffold00043 22796 1 C G scaffold1708 Both SNP 0011.scaffold00043 22820 1 G A scaffold1708 Both SNP 0011.scaffold00043 23029 1 C T scaffold1708 Both SNP 0011.scaffold00043 23062 1 A G scaffold1708 Both SNP 0011.scaffold00043 23093 1 T C scaffold1708 ScafM SNP 0011.scaffold00043 23142 1 G A scaffold1708 ScafM SNP 0011.scaffold00043 23149 1 A C scaffold1708 ScafM INDEL 0011.scaffold00043 23154 1 A . scaffold1708 ScafM SNP 0011.scaffold00043 23156 1 G T scaffold1708 ScafM SNP 0011.scaffold00043 23161 1 C T scaffold1708 ScafM SNP 0011.scaffold00043 23167 1 T C scaffold1708 ScafM SNP 0011.scaffold00043 23178 1 G C scaffold1708 ScafM SNP 0011.scaffold00043 23183 1 C T scaffold1708 ScafM SNP 0011.scaffold00043 23185 1 C T scaffold1708 ScafM SNP 0011.scaffold00043 23203 1 A T scaffold1708 ScafM SNP 0011.scaffold00043 23205 1 C G scaffold1708 ScafM INDEL 0011.scaffold00043 23225 7 ....... ACTCTTA scaffold1708 ScafM INDEL 0011.scaffold00043 23226 3 ... ACT scaffold1708 ScafM SNP 0011.scaffold00043 23246 2 GT AG scaffold1708 ScafM SNP 0011.scaffold00043 23266 1 G C scaffold1708 ScafM SNP 0011.scaffold00043 23271 1 G C scaffold1708 ScafM SNP 0011.scaffold00043 23274 1 C T scaffold1708 ScafM INDEL 0011.scaffold00043 23278 1 A . scaffold1708 ScafM SNP 0011.scaffold00043 23282 1 C T scaffold1708 ScafM SNP 0011.scaffold00043 23286 1 A T scaffold1708 ScafM SNP 0011.scaffold00043 23293 2 TC AG scaffold1708 ScafM SNP 0011.scaffold00043 23301 1 G T scaffold1708 ScafM SNP 0011.scaffold00043 23304 1 T A scaffold1708 ScafM SNP 0011.scaffold00043 23335 2 CA TG scaffold1708 ScafM SNP 0011.scaffold00043 23339 1 G C scaffold1708 ScafM SNP 0011.scaffold00043 23342 1 G T scaffold1708 ScafM SNP 0011.scaffold00043 23344 1 A G scaffold1708 ScafM SNP 0011.scaffold00043 23349 1 A G scaffold1708 ScafM SNP 0011.scaffold00043 23357 1 T A scaffold1708 ScafM SNP 0011.scaffold00043 23361 1 C G scaffold1708 Both SNP 0011.scaffold00043 23429 1 A G scaffold1708 Both INDEL 0011.scaffold00043 23568 1 . T scaffold1708 Both SNP 0011.scaffold00043 23965 1 A T scaffold1708 Both SNP 0011.scaffold00043 24043 1 A G scaffold1708 Both SNP 0011.scaffold00043 24257 1 A T scaffold1708 Both SNP 0011.scaffold00043 24276 1 C T scaffold1708 ScafM SNP 0011.scaffold00043 24334 2 CG TT scaffold1708 ScafM INDEL 0011.scaffold00043 24373 1 T . scaffold1708 ScafM SNP 0011.scaffold00043 24377 1 A C scaffold1708 ScafM SNP 0011.scaffold00043 24395 1 G T scaffold1708 ScafM SNP 0011.scaffold00043 24399 2 TT AA scaffold1708 ReadM SNP 0011.scaffold00043 24527 1 G A - ReadM SNP 0011.scaffold00043 24568 1 C T - ReadM SNP 0011.scaffold00043 24581 1 G A - ReadM INDEL 0011.scaffold00043 24851 2 .. TA - Both SNP 0011.scaffold00043 24896 1 A G scaffold1708 ReadM SNP 0011.scaffold00043 24952 1 C T - ReadM SNP 0011.scaffold00043 24990 1 G A - ReadM SNP 0011.scaffold00043 25182 1 G C - ReadM SNP 0011.scaffold00043 25199 1 A G - ReadM SNP 0011.scaffold00043 25210 1 A T - ScafM INDEL 0011.scaffold00043 25301 7 AGTTGGA ....... scaffold1708 ScafM SNP 0011.scaffold00043 25343 1 C T scaffold1708 ScafM INDEL 0011.scaffold00043 25370 6 CCAGGC ...... scaffold1708 Both SNP 0011.scaffold00043 25420 1 A T scaffold1708 ScafM INDEL 0011.scaffold00043 34313 1 . C scaffold1708 ScafM INDEL 0011.scaffold00043 43812 3 ... TAT scaffold1708 ScafM INDEL 0011.scaffold00043 43904 1 . A scaffold1708 ScafM INDEL 0011.scaffold00043 61606 17 ................. ATCTAAATTTTGCAACT scaffold1708 ReadM INDEL 0011.scaffold00043 62096 1 T . - ScafM SNP 0011.scaffold00043 91302 1 T C scaffold32881 ScafM SNP 0011.scaffold00043 91346 1 C T scaffold32881 ScafM SNP 0011.scaffold00043 91366 1 A C scaffold32881 ReadM SNP 0011.scaffold00043 119736 1 G T - ScafM SNP 0011.scaffold00043 122103 2 AC GG scaffold20363 ScafM SNP 0011.scaffold00043 122110 1 T A scaffold20363 ScafM SNP 0011.scaffold00043 122117 1 T A scaffold20363 ScafM SNP 0011.scaffold00043 122134 1 A G scaffold20363 ScafM SNP 0011.scaffold00043 122142 1 T A scaffold20363 ScafM SNP 0011.scaffold00043 122178 1 C T scaffold20363 ScafM INDEL 0011.scaffold00043 122211 5 ..... ATTAA scaffold20363 ScafM SNP 0011.scaffold00043 122225 1 C T scaffold20363 ScafM SNP 0011.scaffold00043 122227 1 G C scaffold20363 ScafM INDEL 0011.scaffold00043 122229 1 G . scaffold20363 ScafM SNP 0011.scaffold00043 122235 1 C T scaffold20363 ScafM SNP 0011.scaffold00043 122237 1 A G scaffold20363 ScafM SNP 0011.scaffold00043 122264 1 C A scaffold20363 ScafM SNP 0011.scaffold00043 122271 1 C A scaffold20363 ScafM SNP 0011.scaffold00043 122275 1 G T scaffold20363 ScafM SNP 0011.scaffold00043 122277 1 A C scaffold20363 ScafM SNP 0011.scaffold00043 122281 1 G T scaffold20363 ScafM SNP 0011.scaffold00043 122298 1 C T scaffold20363 ScafM SNP 0011.scaffold00043 122308 1 T C scaffold20363 ScafM SNP 0011.scaffold00043 122314 1 C T scaffold20363 ScafM SNP 0011.scaffold00043 122317 1 C T scaffold20363 ScafM SNP 0011.scaffold00043 122322 1 T C scaffold20363 ScafM INDEL 0011.scaffold00043 122352 1 A . scaffold20363 ScafM SNP 0011.scaffold00043 122354 1 A C scaffold20363 ScafM SNP 0011.scaffold00043 131694 1 T C scaffold2301 ScafM SNP 0011.scaffold00043 136655 1 T C scaffold23213 ReadM SNP 0012.scaffold00044 765 1 T C - ReadM SNP 0012.scaffold00044 901 1 A T - ReadM SNP 0012.scaffold00044 1004 1 C T - Both SNP 0012.scaffold00044 1197 1 C T scaffold11340 Both SNP 0012.scaffold00044 1277 1 G A scaffold11340 ReadM INDEL 0012.scaffold00044 1433 1 T . - Both SNP 0012.scaffold00044 1475 1 G T scaffold11340 Both SNP 0012.scaffold00044 1479 1 T C scaffold11340 ReadM INDEL 0012.scaffold00044 1698 1 . A - ReadM INDEL 0012.scaffold00044 2534 1 A . - ReadM SNP 0012.scaffold00044 2653 1 C A - ReadM INDEL 0012.scaffold00044 3402 1 A . - ReadM SNP 0012.scaffold00044 3518 1 G A - ReadM SNP 0012.scaffold00044 3746 1 T A - ReadM SNP 0012.scaffold00044 4166 1 A G - ReadM SNP 0012.scaffold00044 5607 1 T A - ReadM SNP 0012.scaffold00044 6110 1 C G - ReadM SNP 0012.scaffold00044 6489 1 A C - ReadM SNP 0012.scaffold00044 6925 1 C T - ReadM SNP 0012.scaffold00044 7138 1 A G - ReadM SNP 0012.scaffold00044 7619 1 C T - ReadM SNP 0012.scaffold00044 7791 1 G A - ReadM INDEL 0012.scaffold00044 7962 1 A . - ReadM SNP 0012.scaffold00044 8750 2 CC TG - ReadM SNP 0012.scaffold00044 9363 1 A G - ReadM SNP 0012.scaffold00044 9389 1 A G - ReadM SNP 0012.scaffold00044 10641 1 C G - ReadM INDEL 0012.scaffold00044 10842 1 . T - ReadM SNP 0012.scaffold00044 11425 1 G A - ReadM SNP 0012.scaffold00044 11469 1 A G - ReadM SNP 0012.scaffold00044 11472 1 T G - ReadM SNP 0012.scaffold00044 11522 1 A G - ScafM INDEL 0012.scaffold00044 11789 1 . T scaffold11340 Both SNP 0012.scaffold00044 11879 1 T C scaffold11340 ReadM SNP 0012.scaffold00044 12013 1 T G - ReadM SNP 0012.scaffold00044 12205 1 G A - ReadM INDEL 0012.scaffold00044 12519 1 T . - ReadM SNP 0012.scaffold00044 12753 1 G C - ScafM SNP 0012.scaffold00044 12852 1 G A scaffold11340 ReadM SNP 0012.scaffold00044 13008 1 G A - ReadM SNP 0012.scaffold00044 13374 1 T C - ReadM SNP 0012.scaffold00044 13471 1 G A - ReadM SNP 0012.scaffold00044 13499 1 A G - ReadM SNP 0012.scaffold00044 13920 1 G A - ReadM SNP 0012.scaffold00044 14050 1 G C - ReadM SNP 0012.scaffold00044 14107 1 A C - ReadM SNP 0012.scaffold00044 14256 1 C T - ReadM SNP 0012.scaffold00044 14580 1 A G - ScafM SNP 0012.scaffold00044 15328 1 T A scaffold626 ScafM SNP 0012.scaffold00044 15508 1 T C scaffold626 ScafM SNP 0012.scaffold00044 15522 1 T G scaffold626 ScafM INDEL 0012.scaffold00044 15525 1 C . scaffold626 ScafM SNP 0012.scaffold00044 15537 1 C T scaffold626 ScafM SNP 0012.scaffold00044 15585 1 T G scaffold626 ScafM INDEL 0012.scaffold00044 15738 6 ...... TCTGGG scaffold626 ScafM INDEL 0012.scaffold00044 15739 6 ...... GAATTT scaffold626 ScafM INDEL 0012.scaffold00044 16023 1 C . scaffold626 ScafM INDEL 0012.scaffold00044 16028 1 C . scaffold626 ScafM SNP 0012.scaffold00044 17233 1 T G scaffold13432 ScafM SNP 0012.scaffold00044 17239 1 A C scaffold13432 ScafM SNP 0012.scaffold00044 17275 1 T C scaffold13432 ScafM SNP 0012.scaffold00044 17645 1 G T scaffold13432 ScafM SNP 0012.scaffold00044 17711 1 A T scaffold13432 ScafM INDEL 0012.scaffold00044 19630 1 . T scaffold13432 ScafM SNP 0012.scaffold00044 20779 1 C T scaffold13432 ReadM SNP 0012.scaffold00044 20989 1 C A - ReadM SNP 0012.scaffold00044 21158 1 G A - ReadM SNP 0012.scaffold00044 21567 1 T C - ReadM SNP 0012.scaffold00044 22582 1 G A - ReadM SNP 0012.scaffold00044 23140 1 G A - ReadM SNP 0012.scaffold00044 23419 1 T C - ReadM SNP 0012.scaffold00044 23617 1 C A - ReadM SNP 0012.scaffold00044 23620 1 C A - ReadM SNP 0012.scaffold00044 23904 1 C A - ReadM SNP 0012.scaffold00044 24790 1 T G - ReadM SNP 0012.scaffold00044 24966 1 C T - ReadM SNP 0012.scaffold00044 25117 1 G A - ReadM SNP 0012.scaffold00044 25994 1 C T - ReadM SNP 0012.scaffold00044 27090 1 G C - ReadM SNP 0012.scaffold00044 27216 1 C T - ReadM INDEL 0012.scaffold00044 27269 1 G . - ReadM SNP 0012.scaffold00044 27305 1 G A - ReadM SNP 0012.scaffold00044 27441 1 G A - ReadM SNP 0012.scaffold00044 27682 1 T G - ReadM SNP 0012.scaffold00044 27717 1 C T - ReadM SNP 0012.scaffold00044 27831 1 T C - ReadM SNP 0012.scaffold00044 28254 1 C T - ReadM INDEL 0012.scaffold00044 28256 1 C . - ReadM SNP 0012.scaffold00044 28356 1 A G - ReadM SNP 0012.scaffold00044 28623 1 T C - ReadM SNP 0012.scaffold00044 28774 2 TA CC - ReadM SNP 0012.scaffold00044 28909 2 TT CA - ReadM SNP 0012.scaffold00044 29088 1 T A - ReadM SNP 0012.scaffold00044 29683 1 T C - ReadM SNP 0012.scaffold00044 30290 1 G T - ReadM SNP 0012.scaffold00044 30684 1 G A - ReadM SNP 0012.scaffold00044 31226 1 C A - ReadM SNP 0012.scaffold00044 31406 1 A T - ReadM SNP 0012.scaffold00044 31416 1 G A - ReadM SNP 0012.scaffold00044 31922 1 T G - ReadM SNP 0012.scaffold00044 32022 1 G T - ReadM SNP 0012.scaffold00044 32209 1 G C - ScafM SNP 0012.scaffold00044 33178 1 C G scaffold13432 ScafM SNP 0012.scaffold00044 33281 1 G C scaffold13432 ScafM SNP 0012.scaffold00044 33317 1 A T scaffold13432 ScafM SNP 0012.scaffold00044 33359 1 A G scaffold13432 ScafM SNP 0012.scaffold00044 33486 1 T G scaffold13432 ScafM SNP 0012.scaffold00044 33492 1 A G scaffold13432 ReadM SNP 0012.scaffold00044 35432 1 C A - ReadM INDEL 0012.scaffold00044 36791 2 TT .. - ReadM INDEL 0012.scaffold00044 36939 1 . T - Both INDEL 0012.scaffold00044 37106 1 . G scaffold13432 ScafM SNP 0013.scaffold00046 20616 1 T C scaffold13054 ScafM INDEL 0013.scaffold00046 26471 1 . T scaffold13054 ScafM INDEL 0013.scaffold00046 41837 1 . A scaffold13054 ScafM SNP 0014.scaffold00049 22395 2 GC AA scaffold8367 ReadM SNP 0014.scaffold00049 32127 1 C T - ReadM SNP 0014.scaffold00049 60410 1 A T - ScafM INDEL 0014.scaffold00049 60410 1 A . scaffold8367 ScafM SNP 0014.scaffold00049 60426 1 G T scaffold8367 ScafM INDEL 0014.scaffold00049 64561 8 TTCTTTTT ........ scaffold8367 ScafM INDEL 0014.scaffold00049 64571 6 TCAATG ...... scaffold8367 ScafM INDEL 0014.scaffold00049 64578 9 TAGTGATTT ......... scaffold8367 ReadM INDEL 0014.scaffold00049 112641 1 . T - ScafM INDEL 0014.scaffold00049 123947 1 . T scaffold2592 ScafM SNP 0014.scaffold00049 146964 1 G T scaffold2592 ScafM SNP 0014.scaffold00049 146966 1 A G scaffold2592 ScafM SNP 0014.scaffold00049 146968 1 G A scaffold2592 ScafM SNP 0014.scaffold00049 146974 1 G A scaffold2592 ScafM SNP 0014.scaffold00049 146982 1 A T scaffold2592 ScafM SNP 0014.scaffold00049 146987 2 AT TA scaffold2592 ScafM SNP 0014.scaffold00049 146990 1 G C scaffold2592 ScafM SNP 0014.scaffold00049 146995 1 C G scaffold2592 ScafM INDEL 0014.scaffold00049 147001 3 .CA AGG scaffold2592 ScafM SNP 0014.scaffold00049 147005 1 A T scaffold2592 ScafM SNP 0014.scaffold00049 147008 1 T A scaffold2592 ScafM SNP 0014.scaffold00049 147013 1 A G scaffold2592 ScafM SNP 0014.scaffold00049 147017 1 T A scaffold2592 ScafM SNP 0014.scaffold00049 147025 1 T C scaffold2592 ScafM SNP 0014.scaffold00049 147033 1 T A scaffold2592 ScafM INDEL 0014.scaffold00049 153043 72 ACAGGTACCTCCTCTGCCTCCTCGCCTATATTTCGTTGTTGAGGTTGAGGACCCTCCTCATGAGGACCATCA ........................................................................ scaffold2592 ScafM SNP 0014.scaffold00049 174280 1 T C scaffold1877 ScafM SNP 0014.scaffold00049 174335 1 A T scaffold1877 ScafM SNP 0014.scaffold00049 174407 1 G T scaffold1877 ScafM SNP 0014.scaffold00049 174474 1 T C scaffold1877 ReadM SNP 0014.scaffold00049 194722 1 T C - ReadM SNP 0014.scaffold00049 194725 1 G A - ScafM INDEL 0014.scaffold00049 215223 14 CCTTCACTCATGAT .............. scaffold1100 ScafM INDEL 0014.scaffold00049 215243 1 T . scaffold1100 ScafM SNP 0014.scaffold00049 236717 1 T C scaffold1100 ScafM SNP 0015.scaffold00050 1489 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 1499 1 G C scaffold41750 ReadM SNP 0015.scaffold00050 1772 1 T C - ReadM SNP 0015.scaffold00050 1775 1 A G - ReadM SNP 0015.scaffold00050 1804 1 G T - ReadM SNP 0015.scaffold00050 1860 1 T C - ReadM SNP 0015.scaffold00050 2025 1 T G - ReadM SNP 0015.scaffold00050 2150 1 G A - ReadM SNP 0015.scaffold00050 2274 1 T A - ReadM SNP 0015.scaffold00050 2282 1 T C - ReadM SNP 0015.scaffold00050 2333 1 A G - ReadM SNP 0015.scaffold00050 2356 1 A G - ReadM SNP 0015.scaffold00050 2359 1 C T - ScafM SNP 0015.scaffold00050 4934 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 4949 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 5274 1 A C scaffold41750 ScafM SNP 0015.scaffold00050 5283 1 A C scaffold41750 ScafM INDEL 0015.scaffold00050 5293 2 .T AA scaffold41750 ScafM SNP 0015.scaffold00050 5297 1 T A scaffold41750 ScafM SNP 0015.scaffold00050 5301 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5312 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5314 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5316 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 5325 1 A T scaffold41750 ScafM SNP 0015.scaffold00050 5363 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 5381 1 T A scaffold41750 ScafM SNP 0015.scaffold00050 5391 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 5402 2 CT TC scaffold41750 ScafM INDEL 0015.scaffold00050 5422 1 C . scaffold41750 ScafM SNP 0015.scaffold00050 5449 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 5477 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 5479 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 5503 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5506 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5522 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5528 1 G T scaffold41750 ScafM SNP 0015.scaffold00050 5547 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5860 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 5879 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 5893 2 CG TA scaffold41750 ScafM SNP 0015.scaffold00050 5904 1 C G scaffold41750 ScafM SNP 0015.scaffold00050 5915 1 T G scaffold41750 ScafM SNP 0015.scaffold00050 5918 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 5924 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 5927 1 T G scaffold41750 ScafM SNP 0015.scaffold00050 5934 1 C G scaffold41750 ScafM SNP 0015.scaffold00050 5940 1 A G scaffold41750 ScafM INDEL 0015.scaffold00050 5947 1 G . scaffold41750 ScafM SNP 0015.scaffold00050 5951 2 AT GC scaffold41750 ScafM SNP 0015.scaffold00050 5963 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 5971 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6027 1 T A scaffold41750 ScafM SNP 0015.scaffold00050 6032 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6047 1 T G scaffold41750 ScafM SNP 0015.scaffold00050 6049 1 G A scaffold41750 ScafM SNP 0015.scaffold00050 6057 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 6063 1 A T scaffold41750 ScafM INDEL 0015.scaffold00050 6078 1 G . scaffold41750 ScafM SNP 0015.scaffold00050 6083 2 AA GG scaffold41750 ScafM SNP 0015.scaffold00050 6091 1 A T scaffold41750 ScafM SNP 0015.scaffold00050 6096 1 C A scaffold41750 ScafM SNP 0015.scaffold00050 6101 1 G C scaffold41750 ScafM SNP 0015.scaffold00050 6103 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6117 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6131 1 T A scaffold41750 ScafM SNP 0015.scaffold00050 6151 1 T G scaffold41750 ScafM SNP 0015.scaffold00050 6153 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6170 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6190 1 A C scaffold41750 ScafM SNP 0015.scaffold00050 6261 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6265 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6268 1 T G scaffold41750 ScafM SNP 0015.scaffold00050 6273 1 T A scaffold41750 ScafM SNP 0015.scaffold00050 6300 1 A C scaffold41750 ScafM SNP 0015.scaffold00050 6302 1 G T scaffold41750 ScafM SNP 0015.scaffold00050 6307 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6336 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6379 1 A C scaffold41750 ScafM SNP 0015.scaffold00050 6388 1 C A scaffold41750 ScafM SNP 0015.scaffold00050 6405 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6409 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6412 1 C A scaffold41750 ScafM SNP 0015.scaffold00050 6415 2 TA CG scaffold41750 ScafM SNP 0015.scaffold00050 6442 1 C A scaffold41750 ScafM SNP 0015.scaffold00050 6459 1 T C scaffold41750 ScafM SNP 0015.scaffold00050 6621 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6623 1 A G scaffold41750 ScafM SNP 0015.scaffold00050 6629 1 C T scaffold41750 ScafM SNP 0015.scaffold00050 6636 1 A G scaffold41750 Both SNP 0015.scaffold00050 6680 1 G A scaffold41750 ScafM INDEL 0015.scaffold00050 6738 1 . T scaffold41750 Both SNP 0015.scaffold00050 6866 1 T G scaffold41750 ScafM INDEL 0015.scaffold00050 6931 1 C . scaffold41750 ScafM SNP 0015.scaffold00050 6988 1 G A scaffold41750 ReadM INDEL 0015.scaffold00050 7041 1 T . - ScafM INDEL 0015.scaffold00050 7041 2 TT .A scaffold41750 ScafM INDEL 0015.scaffold00050 7162 3 GAT ... scaffold41750 ScafM SNP 0015.scaffold00050 7176 1 A T scaffold41750 Both INDEL 0015.scaffold00050 7211 3 ... GAG scaffold41750 Both SNP 0015.scaffold00050 7352 1 G A scaffold41750 Both SNP 0015.scaffold00050 7360 1 T G scaffold41750 Both SNP 0015.scaffold00050 7379 1 A G scaffold41750 Both SNP 0015.scaffold00050 7504 1 C A scaffold41750 Both SNP 0015.scaffold00050 7723 1 A T scaffold41750 Both SNP 0015.scaffold00050 7784 1 T C scaffold41750 Both SNP 0015.scaffold00050 7791 1 G T scaffold41750 ReadM SNP 0015.scaffold00050 7871 1 G T - ReadM SNP 0015.scaffold00050 7919 1 A G - ReadM SNP 0015.scaffold00050 7942 1 T A - ReadM SNP 0015.scaffold00050 7954 1 T C - ScafM SNP 0015.scaffold00050 8083 1 C G scaffold12484 ScafM SNP 0015.scaffold00050 8117 1 A T scaffold12484 ScafM SNP 0015.scaffold00050 8121 1 T C scaffold12484 ScafM SNP 0015.scaffold00050 8147 1 A C scaffold12484 ScafM SNP 0015.scaffold00050 8162 1 G A scaffold12484 ScafM SNP 0015.scaffold00050 8204 1 G A scaffold12484 ReadM SNP 0015.scaffold00050 8550 1 A G - ReadM SNP 0015.scaffold00050 11125 1 G A - ReadM SNP 0015.scaffold00050 11469 1 T C - ReadM SNP 0015.scaffold00050 12366 1 A G - ReadM SNP 0015.scaffold00050 12924 1 A G - ReadM SNP 0015.scaffold00050 12987 1 A G - ReadM SNP 0015.scaffold00050 13486 1 A G - ReadM SNP 0015.scaffold00050 13671 1 T A - ReadM SNP 0015.scaffold00050 13718 1 A G - Both SNP 0015.scaffold00050 14398 1 C T scaffold36289 ScafM SNP 0015.scaffold00050 14418 1 C T scaffold36289 ScafM SNP 0015.scaffold00050 15090 1 G C scaffold36289 ScafM SNP 0015.scaffold00050 15344 1 C T scaffold36289 ScafM SNP 0015.scaffold00050 15464 1 A G scaffold36289 ScafM SNP 0015.scaffold00050 15868 1 T C scaffold15993 ScafM SNP 0015.scaffold00050 15871 1 C T scaffold15993 ScafM INDEL 0015.scaffold00050 15916 1 . T scaffold15993 ScafM INDEL 0015.scaffold00050 15937 1 G . scaffold15993 ScafM SNP 0015.scaffold00050 16027 1 C T scaffold15993 ScafM SNP 0015.scaffold00050 16046 1 C T scaffold15993 ScafM SNP 0015.scaffold00050 16147 1 T C scaffold15993 ScafM SNP 0015.scaffold00050 16156 1 A G scaffold15993 ReadM SNP 0015.scaffold00050 19560 1 A G - ScafM SNP 0015.scaffold00050 20370 1 T G scaffold4451 ScafM SNP 0015.scaffold00050 20397 1 T A scaffold4451 ScafM SNP 0015.scaffold00050 20403 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 20419 1 G T scaffold4451 ScafM INDEL 0015.scaffold00050 20451 1 T . scaffold4451 Both SNP 0015.scaffold00050 20692 1 G A scaffold4451 ReadM SNP 0015.scaffold00050 20756 1 T C - ReadM SNP 0015.scaffold00050 20822 1 T C - ScafM SNP 0015.scaffold00050 20851 1 C T scaffold2408 ReadM SNP 0015.scaffold00050 20852 1 G A - ScafM SNP 0015.scaffold00050 20856 1 A G scaffold2408 ScafM SNP 0015.scaffold00050 20880 1 A G scaffold2408 Both SNP 0015.scaffold00050 20996 1 A T scaffold4451 ReadM INDEL 0015.scaffold00050 21177 1 A . - ScafM SNP 0015.scaffold00050 21525 1 G C scaffold4451 ScafM SNP 0015.scaffold00050 21647 1 G C scaffold4451 ScafM SNP 0015.scaffold00050 21720 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 21749 1 A T scaffold4451 ScafM SNP 0015.scaffold00050 21760 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 21825 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 21844 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 21850 1 T C scaffold4451 Both INDEL 0015.scaffold00050 21924 1 A . scaffold4451 Both SNP 0015.scaffold00050 22137 1 T C scaffold4451 ScafM INDEL 0015.scaffold00050 22201 4 .... AGTA scaffold4451 ScafM SNP 0015.scaffold00050 22203 1 C G scaffold4451 Both SNP 0015.scaffold00050 22231 1 T C scaffold4451 Both SNP 0015.scaffold00050 22234 1 G T scaffold4451 ReadM INDEL 0015.scaffold00050 22515 1 . A - ReadM SNP 0015.scaffold00050 22527 1 C T - ReadM SNP 0015.scaffold00050 22661 1 A G - ScafM SNP 0015.scaffold00050 23652 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 23828 1 A C scaffold4451 Both SNP 0015.scaffold00050 24296 1 A T scaffold4451 Both SNP 0015.scaffold00050 24521 1 T A scaffold4451 ReadM INDEL 0015.scaffold00050 24865 2 TA .. - ScafM SNP 0015.scaffold00050 26784 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 26862 1 T G scaffold4451 ScafM SNP 0015.scaffold00050 27049 1 T C scaffold4451 Both SNP 0015.scaffold00050 27150 1 A T scaffold4451 Both INDEL 0015.scaffold00050 27177 1 . A scaffold4451 ReadM SNP 0015.scaffold00050 27481 1 A C - ReadM SNP 0015.scaffold00050 27614 1 G A - ReadM SNP 0015.scaffold00050 27617 1 T C - ReadM SNP 0015.scaffold00050 27674 1 A G - ReadM SNP 0015.scaffold00050 27971 1 T C - ReadM SNP 0015.scaffold00050 28102 1 A G - ReadM SNP 0015.scaffold00050 28363 1 T A - ReadM SNP 0015.scaffold00050 28423 1 G A - ReadM SNP 0015.scaffold00050 28487 1 G T - Both SNP 0015.scaffold00050 28970 1 A G scaffold4451 Both SNP 0015.scaffold00050 29073 1 C T scaffold4451 Both SNP 0015.scaffold00050 29405 1 A C scaffold4451 Both SNP 0015.scaffold00050 29421 1 T A scaffold4451 Both SNP 0015.scaffold00050 29480 1 C T scaffold4451 ScafM INDEL 0015.scaffold00050 29721 1 . A scaffold4451 Both INDEL 0015.scaffold00050 30124 1 . T scaffold4451 Both SNP 0015.scaffold00050 30183 1 C A scaffold4451 Both SNP 0015.scaffold00050 30208 1 A T scaffold4451 Both INDEL 0015.scaffold00050 30401 3 ... ATG scaffold4451 ScafM SNP 0015.scaffold00050 30439 1 C T scaffold4451 Both INDEL 0015.scaffold00050 30464 1 T . scaffold4451 ReadM SNP 0015.scaffold00050 30748 1 G T - ReadM SNP 0015.scaffold00050 31283 1 C T - ReadM SNP 0015.scaffold00050 31407 1 T C - ReadM SNP 0015.scaffold00050 31923 1 G A - ReadM SNP 0015.scaffold00050 32034 1 C T - Both SNP 0015.scaffold00050 32211 1 A G scaffold4451 Both SNP 0015.scaffold00050 32280 1 G A scaffold4451 Both SNP 0015.scaffold00050 32294 1 T C scaffold4451 Both INDEL 0015.scaffold00050 32515 1 T . scaffold4451 Both SNP 0015.scaffold00050 32842 1 A T scaffold4451 Both SNP 0015.scaffold00050 32959 1 G T scaffold4451 Both SNP 0015.scaffold00050 32989 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 33109 2 AG CA scaffold4451 ScafM SNP 0015.scaffold00050 33113 1 C A scaffold4451 ScafM SNP 0015.scaffold00050 33125 1 C T scaffold4451 Both SNP 0015.scaffold00050 33301 1 G A scaffold4451 Both SNP 0015.scaffold00050 33304 1 G C scaffold4451 Both SNP 0015.scaffold00050 33327 1 A G scaffold4451 Both INDEL 0015.scaffold00050 33457 1 T . scaffold4451 Both SNP 0015.scaffold00050 33583 1 T C scaffold4451 Both INDEL 0015.scaffold00050 33616 1 . T scaffold4451 Both SNP 0015.scaffold00050 33711 1 T G scaffold4451 ReadM SNP 0015.scaffold00050 33960 1 A G - ReadM SNP 0015.scaffold00050 34062 1 A G - Both SNP 0015.scaffold00050 34361 1 A G scaffold4451 Both SNP 0015.scaffold00050 34389 1 G A scaffold4451 Both SNP 0015.scaffold00050 34407 1 C G scaffold4451 Both SNP 0015.scaffold00050 34409 1 T G scaffold4451 ReadM SNP 0015.scaffold00050 34711 1 G A - ReadM SNP 0015.scaffold00050 34919 1 A G - ReadM SNP 0015.scaffold00050 34931 1 C T - ReadM SNP 0015.scaffold00050 35025 1 G T - Both SNP 0015.scaffold00050 35205 1 C A scaffold4451 ReadM SNP 0015.scaffold00050 35382 1 T C - ReadM SNP 0015.scaffold00050 35752 1 G A - ReadM SNP 0015.scaffold00050 35849 1 A C - Both SNP 0015.scaffold00050 36433 1 G A scaffold4451 ReadM SNP 0015.scaffold00050 36468 1 G A - ReadM SNP 0015.scaffold00050 36574 1 G A - ReadM SNP 0015.scaffold00050 36602 1 C T - ScafM SNP 0015.scaffold00050 37141 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 37193 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 37232 1 T A scaffold4451 ScafM SNP 0015.scaffold00050 37725 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 37770 1 C G scaffold4451 ReadM SNP 0015.scaffold00050 38043 1 A G - Both SNP 0015.scaffold00050 38595 1 A G scaffold4451 ReadM SNP 0015.scaffold00050 38646 1 T G - ReadM SNP 0015.scaffold00050 38697 1 G A - ReadM SNP 0015.scaffold00050 38776 1 G T - ReadM SNP 0015.scaffold00050 39293 1 A G - ReadM SNP 0015.scaffold00050 39315 1 A G - ReadM SNP 0015.scaffold00050 39524 1 C G - ReadM SNP 0015.scaffold00050 39566 1 C T - ReadM SNP 0015.scaffold00050 39809 1 C A - ReadM INDEL 0015.scaffold00050 40016 1 A . - ReadM SNP 0015.scaffold00050 40094 1 A G - ReadM SNP 0015.scaffold00050 40239 1 T C - ReadM INDEL 0015.scaffold00050 40490 1 A . - ReadM SNP 0015.scaffold00050 40519 1 G A - ReadM SNP 0015.scaffold00050 40649 1 T A - ReadM SNP 0015.scaffold00050 41182 1 G C - ReadM INDEL 0015.scaffold00050 41657 1 . C - ReadM SNP 0015.scaffold00050 41764 1 T C - ReadM SNP 0015.scaffold00050 42035 1 A G - Both SNP 0015.scaffold00050 42057 1 T C scaffold4451 Both SNP 0015.scaffold00050 42104 1 G A scaffold4451 Both SNP 0015.scaffold00050 42188 1 G A scaffold4451 Both SNP 0015.scaffold00050 42210 1 G T scaffold4451 ScafM SNP 0015.scaffold00050 42344 1 T A scaffold4451 ReadM SNP 0015.scaffold00050 42639 1 C A - Both SNP 0015.scaffold00050 42771 1 G C scaffold4451 Both SNP 0015.scaffold00050 42861 1 C A scaffold4451 Both SNP 0015.scaffold00050 42997 1 A G scaffold4451 Both SNP 0015.scaffold00050 43071 1 G A scaffold4451 Both SNP 0015.scaffold00050 43096 1 A T scaffold4451 ScafM SNP 0015.scaffold00050 43808 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 43836 1 G C scaffold4451 ScafM SNP 0015.scaffold00050 43878 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 43949 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 43983 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 44028 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 44043 1 G T scaffold4451 ScafM INDEL 0015.scaffold00050 44191 2 .. TT scaffold4451 ScafM INDEL 0015.scaffold00050 44216 1 . G scaffold4451 ReadM SNP 0015.scaffold00050 44568 1 T C - ReadM SNP 0015.scaffold00050 44592 1 G A - ReadM SNP 0015.scaffold00050 44604 1 A G - ReadM SNP 0015.scaffold00050 44671 1 A G - ReadM SNP 0015.scaffold00050 44769 1 C G - ReadM SNP 0015.scaffold00050 44899 1 C T - ScafM INDEL 0015.scaffold00050 45134 2 .. GT scaffold4451 Both SNP 0015.scaffold00050 45298 1 C T scaffold4451 ReadM INDEL 0015.scaffold00050 45378 1 T . - ReadM SNP 0015.scaffold00050 45396 1 C G - ReadM SNP 0015.scaffold00050 45491 1 T C - ScafM INDEL 0015.scaffold00050 45544 1 . A scaffold4451 Both SNP 0015.scaffold00050 45571 1 T G scaffold4451 Both SNP 0015.scaffold00050 45577 1 T G scaffold4451 Both SNP 0015.scaffold00050 45914 1 T G scaffold4451 Both SNP 0015.scaffold00050 46025 1 T C scaffold4451 Both SNP 0015.scaffold00050 46204 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 46232 1 T C scaffold4451 Both SNP 0015.scaffold00050 46412 1 G A scaffold4451 Both SNP 0015.scaffold00050 46451 1 C T scaffold4451 Both SNP 0015.scaffold00050 46497 1 T C scaffold4451 Both SNP 0015.scaffold00050 46611 1 T C scaffold4451 Both SNP 0015.scaffold00050 46647 1 C T scaffold4451 Both SNP 0015.scaffold00050 46660 1 A G scaffold4451 Both SNP 0015.scaffold00050 46822 1 C T scaffold4451 Both SNP 0015.scaffold00050 46932 1 C T scaffold4451 Both SNP 0015.scaffold00050 46979 1 T C scaffold4451 Both SNP 0015.scaffold00050 47098 1 A G scaffold4451 Both SNP 0015.scaffold00050 47121 1 A C scaffold4451 Both SNP 0015.scaffold00050 47385 1 C T scaffold4451 Both SNP 0015.scaffold00050 47429 1 C T scaffold4451 Both SNP 0015.scaffold00050 47434 1 T C scaffold4451 ReadM INDEL 0015.scaffold00050 47554 1 C . - ReadM SNP 0015.scaffold00050 47577 1 T A - ReadM SNP 0015.scaffold00050 47668 1 C A - ReadM SNP 0015.scaffold00050 47692 1 A C - ReadM SNP 0015.scaffold00050 47728 1 C T - ReadM SNP 0015.scaffold00050 47770 1 C T - ScafM SNP 0015.scaffold00050 47833 1 A C scaffold4451 Both SNP 0015.scaffold00050 47838 1 G A scaffold4451 Both SNP 0015.scaffold00050 47865 1 T A scaffold4451 ReadM SNP 0015.scaffold00050 48040 1 T C - ReadM SNP 0015.scaffold00050 48100 1 A G - ReadM SNP 0015.scaffold00050 48202 1 G A - ReadM SNP 0015.scaffold00050 48263 1 T A - Both SNP 0015.scaffold00050 48600 1 T G scaffold4451 Both INDEL 0015.scaffold00050 48613 1 A . scaffold4451 ScafM SNP 0015.scaffold00050 48636 3 TCC CTT scaffold4451 Both SNP 0015.scaffold00050 48685 1 G A scaffold4451 Both SNP 0015.scaffold00050 48701 1 T C scaffold4451 ReadM SNP 0015.scaffold00050 49086 1 G T - ReadM SNP 0015.scaffold00050 49170 1 C T - ReadM SNP 0015.scaffold00050 49246 1 G C - Both SNP 0015.scaffold00050 49409 1 G C scaffold4451 Both SNP 0015.scaffold00050 49627 1 T G scaffold4451 Both SNP 0015.scaffold00050 49823 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 49876 1 A G scaffold4451 Both SNP 0015.scaffold00050 49968 1 G A scaffold4451 Both SNP 0015.scaffold00050 49987 1 G C scaffold4451 Both SNP 0015.scaffold00050 49994 1 G A scaffold4451 Both SNP 0015.scaffold00050 50043 1 T A scaffold4451 Both SNP 0015.scaffold00050 50059 1 C T scaffold4451 Both SNP 0015.scaffold00050 50140 1 T G scaffold4451 Both SNP 0015.scaffold00050 50158 1 T C scaffold4451 Both SNP 0015.scaffold00050 50443 1 T C scaffold4451 Both SNP 0015.scaffold00050 50514 1 G T scaffold4451 Both SNP 0015.scaffold00050 50627 1 C A scaffold4451 ScafM SNP 0015.scaffold00050 50712 1 A T scaffold4451 Both SNP 0015.scaffold00050 50725 1 A G scaffold4451 Both SNP 0015.scaffold00050 50981 1 A G scaffold4451 Both SNP 0015.scaffold00050 51040 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 51052 2 TC AT scaffold4451 ScafM SNP 0015.scaffold00050 51057 1 C T scaffold4451 Both SNP 0015.scaffold00050 51250 1 T G scaffold4451 Both SNP 0015.scaffold00050 51326 1 C A scaffold4451 Both SNP 0015.scaffold00050 51423 1 G A scaffold4451 Both SNP 0015.scaffold00050 51477 1 G A scaffold4451 Both SNP 0015.scaffold00050 51554 1 G C scaffold4451 Both SNP 0015.scaffold00050 51558 1 C T scaffold4451 Both INDEL 0015.scaffold00050 51609 1 . T scaffold4451 Both SNP 0015.scaffold00050 51687 1 T C scaffold4451 Both SNP 0015.scaffold00050 51766 1 A T scaffold4451 Both SNP 0015.scaffold00050 52049 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 52284 1 A T scaffold4451 ScafM SNP 0015.scaffold00050 52554 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 52630 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 53488 1 T A scaffold37745 ScafM SNP 0015.scaffold00050 53502 1 A T scaffold37745 ScafM SNP 0015.scaffold00050 54022 1 C G scaffold37745 ScafM INDEL 0015.scaffold00050 54029 6 ACCACT ...... scaffold37745 ScafM SNP 0015.scaffold00050 54078 1 A C scaffold37745 ScafM SNP 0015.scaffold00050 54377 1 T C scaffold37745 ScafM SNP 0015.scaffold00050 54604 1 A G scaffold37745 ScafM SNP 0015.scaffold00050 54671 1 T G scaffold37745 ScafM SNP 0015.scaffold00050 54693 1 G C scaffold37745 ScafM SNP 0015.scaffold00050 54698 1 A T scaffold37745 ScafM SNP 0015.scaffold00050 54758 1 G A scaffold37745 ScafM SNP 0015.scaffold00050 54788 1 A T scaffold37745 ScafM SNP 0015.scaffold00050 56480 1 C G scaffold4451 ScafM INDEL 0015.scaffold00050 56483 1 . G scaffold4451 ScafM SNP 0015.scaffold00050 56522 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 56545 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 56690 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 56802 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 56861 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 56944 1 C T scaffold4451 Both SNP 0015.scaffold00050 56968 1 A T scaffold4451 ReadM SNP 0015.scaffold00050 57439 1 G A - ReadM SNP 0015.scaffold00050 57473 1 T C - ReadM SNP 0015.scaffold00050 57522 1 T C - Both SNP 0015.scaffold00050 57534 1 C T scaffold4451 Both SNP 0015.scaffold00050 57620 1 A G scaffold4451 Both SNP 0015.scaffold00050 57631 1 T C scaffold4451 Both SNP 0015.scaffold00050 57682 1 C G scaffold4451 Both SNP 0015.scaffold00050 57761 1 A G scaffold4451 ScafM INDEL 0015.scaffold00050 57817 5 ..... AAAAA scaffold4451 ScafM SNP 0015.scaffold00050 57819 1 C A scaffold4451 Both SNP 0015.scaffold00050 57839 1 A G scaffold4451 Both INDEL 0015.scaffold00050 58009 1 G . scaffold4451 Both SNP 0015.scaffold00050 58015 1 G A scaffold4451 Both SNP 0015.scaffold00050 58187 1 G A scaffold4451 Both SNP 0015.scaffold00050 58341 1 G C scaffold4451 Both SNP 0015.scaffold00050 58436 1 G A scaffold4451 Both SNP 0015.scaffold00050 58472 1 A C scaffold4451 Both SNP 0015.scaffold00050 58518 1 A T scaffold4451 Both INDEL 0015.scaffold00050 58609 1 C . scaffold4451 Both SNP 0015.scaffold00050 58690 1 C G scaffold4451 Both SNP 0015.scaffold00050 58800 1 G A scaffold4451 Both SNP 0015.scaffold00050 58915 1 C G scaffold4451 Both SNP 0015.scaffold00050 58940 1 C T scaffold4451 Both SNP 0015.scaffold00050 59007 1 C T scaffold4451 Both SNP 0015.scaffold00050 59187 1 C A scaffold4451 ScafM SNP 0015.scaffold00050 59234 1 A G scaffold4451 Both SNP 0015.scaffold00050 59480 1 C T scaffold4451 Both SNP 0015.scaffold00050 59657 1 A G scaffold4451 Both SNP 0015.scaffold00050 59724 1 C T scaffold4451 Both SNP 0015.scaffold00050 59884 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 59905 1 T C scaffold4451 ScafM INDEL 0015.scaffold00050 59922 1 A . scaffold4451 ScafM INDEL 0015.scaffold00050 59927 1 C . scaffold4451 Both SNP 0015.scaffold00050 60113 1 T G scaffold4451 Both SNP 0015.scaffold00050 60340 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 60528 1 G A scaffold4451 Both SNP 0015.scaffold00050 60555 1 G T scaffold4451 Both SNP 0015.scaffold00050 60677 1 T C scaffold4451 Both SNP 0015.scaffold00050 60689 1 T G scaffold4451 ReadM SNP 0015.scaffold00050 60791 1 C T - Both SNP 0015.scaffold00050 60865 1 G A scaffold4451 Both SNP 0015.scaffold00050 60887 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 60901 2 TA CG scaffold4451 Both SNP 0015.scaffold00050 61049 1 C T scaffold4451 Both SNP 0015.scaffold00050 61208 1 G T scaffold4451 Both SNP 0015.scaffold00050 61236 1 C T scaffold4451 Both SNP 0015.scaffold00050 61251 1 A G scaffold4451 Both SNP 0015.scaffold00050 61267 1 C A scaffold4451 Both SNP 0015.scaffold00050 61296 1 C T scaffold4451 Both SNP 0015.scaffold00050 61535 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 61585 1 C T scaffold4451 ScafM INDEL 0015.scaffold00050 61588 6 CCGTGG ...... scaffold4451 ScafM SNP 0015.scaffold00050 61596 1 G A scaffold4451 ScafM INDEL 0015.scaffold00050 61607 2 CG .. scaffold4451 ScafM INDEL 0015.scaffold00050 61610 4 GACC .... scaffold4451 ScafM SNP 0015.scaffold00050 61779 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 61819 1 T G scaffold4451 ScafM SNP 0015.scaffold00050 61871 1 G T scaffold4451 ScafM INDEL 0015.scaffold00050 61875 1 C . scaffold4451 ScafM SNP 0015.scaffold00050 61884 1 T A scaffold4451 ScafM INDEL 0015.scaffold00050 61939 4 CTTA .... scaffold4451 ScafM SNP 0015.scaffold00050 61955 1 G C scaffold4451 ScafM SNP 0015.scaffold00050 61973 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 61978 1 T A scaffold4451 ScafM SNP 0015.scaffold00050 62016 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 62076 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 62144 1 G A scaffold4451 ScafM INDEL 0015.scaffold00050 62442 1 . A scaffold4451 ScafM SNP 0015.scaffold00050 62476 1 C T scaffold4451 Both SNP 0015.scaffold00050 63663 1 G A scaffold4451 ReadM SNP 0015.scaffold00050 63729 1 G A - ReadM SNP 0015.scaffold00050 63754 1 G A - ReadM SNP 0015.scaffold00050 63836 1 G T - ReadM SNP 0015.scaffold00050 63902 1 A C - ScafM INDEL 0015.scaffold00050 64080 1 . T scaffold4451 ScafM SNP 0015.scaffold00050 64157 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 64170 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 64219 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 64233 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 64425 1 C A scaffold4451 ScafM SNP 0015.scaffold00050 64443 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 64494 1 A T scaffold4451 ScafM INDEL 0015.scaffold00050 64809 1 . T scaffold4451 ScafM SNP 0015.scaffold00050 64883 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 64898 1 C G scaffold4451 ScafM SNP 0015.scaffold00050 64906 1 A G scaffold4451 Both SNP 0015.scaffold00050 65377 1 A C scaffold4451 Both SNP 0015.scaffold00050 65558 1 T G scaffold4451 Both SNP 0015.scaffold00050 65572 1 T G scaffold4451 Both SNP 0015.scaffold00050 65640 1 T C scaffold4451 ScafM INDEL 0015.scaffold00050 65675 9 ACAGAAGTG ......... scaffold4451 ScafM INDEL 0015.scaffold00050 65686 1 A . scaffold4451 ScafM INDEL 0015.scaffold00050 65689 4 TTTT .... scaffold4451 ReadM INDEL 0015.scaffold00050 65693 1 G . - ScafM INDEL 0015.scaffold00050 65695 13 ATAAATTCTTATT ............. scaffold4451 ScafM INDEL 0015.scaffold00050 65719 1 T . scaffold4451 Both SNP 0015.scaffold00050 65736 1 G C scaffold4451 Both SNP 0015.scaffold00050 65741 1 T A scaffold4451 Both SNP 0015.scaffold00050 65786 1 G T scaffold4451 ScafM SNP 0015.scaffold00050 65953 2 AT TC scaffold4451 Both SNP 0015.scaffold00050 65977 1 T G scaffold4451 Both SNP 0015.scaffold00050 66300 1 G T scaffold4451 Both SNP 0015.scaffold00050 66375 1 C T scaffold4451 Both SNP 0015.scaffold00050 66409 1 C T scaffold4451 ReadM SNP 0015.scaffold00050 66568 1 C T - ReadM SNP 0015.scaffold00050 66608 1 A G - ReadM SNP 0015.scaffold00050 66676 1 G A - ReadM SNP 0015.scaffold00050 66780 1 C T - ReadM SNP 0015.scaffold00050 66890 1 G C - ReadM SNP 0015.scaffold00050 66907 1 T C - ReadM SNP 0015.scaffold00050 67031 1 A T - ReadM SNP 0015.scaffold00050 67044 1 A G - ReadM INDEL 0015.scaffold00050 67115 1 T . - Both SNP 0015.scaffold00050 67138 1 C A scaffold4451 ReadM SNP 0015.scaffold00050 67174 1 T A - ReadM SNP 0015.scaffold00050 67181 1 T C - ReadM SNP 0015.scaffold00050 67287 1 A C - Both SNP 0015.scaffold00050 67320 1 G A scaffold4451 Both SNP 0015.scaffold00050 67341 1 A G scaffold4451 ReadM SNP 0015.scaffold00050 67561 1 T C - ReadM SNP 0015.scaffold00050 67569 1 G T - ReadM SNP 0015.scaffold00050 67632 1 C T - ReadM SNP 0015.scaffold00050 67807 1 C T - ReadM SNP 0015.scaffold00050 67910 1 T G - ReadM SNP 0015.scaffold00050 67935 2 GG AA - ReadM SNP 0015.scaffold00050 68122 1 A G - ReadM SNP 0015.scaffold00050 68210 1 G T - ReadM SNP 0015.scaffold00050 68229 1 A T - Both SNP 0015.scaffold00050 68441 1 C T scaffold4451 Both SNP 0015.scaffold00050 68700 1 C A scaffold4451 ScafM INDEL 0015.scaffold00050 68709 8 ........ TGGGATAG scaffold4451 ReadM SNP 0015.scaffold00050 68933 1 T G - ReadM SNP 0015.scaffold00050 68948 1 T A - ReadM SNP 0015.scaffold00050 68981 1 C A - ReadM SNP 0015.scaffold00050 69004 1 C T - ReadM SNP 0015.scaffold00050 69026 1 T A - ReadM SNP 0015.scaffold00050 69054 1 T C - ReadM SNP 0015.scaffold00050 69177 1 T C - Both SNP 0015.scaffold00050 69191 1 C A scaffold4451 ReadM SNP 0015.scaffold00050 69310 1 G T - ReadM SNP 0015.scaffold00050 69404 1 G T - ReadM SNP 0015.scaffold00050 69508 1 C T - ReadM INDEL 0015.scaffold00050 69516 2 TG .. - Both SNP 0015.scaffold00050 69580 1 C G scaffold4451 Both SNP 0015.scaffold00050 69596 1 T C scaffold4451 Both SNP 0015.scaffold00050 69599 1 T C scaffold4451 Both SNP 0015.scaffold00050 69648 1 C A scaffold4451 ScafM SNP 0015.scaffold00050 69717 1 A G scaffold4451 ScafM INDEL 0015.scaffold00050 69747 4 .... TTAT scaffold4451 Both SNP 0015.scaffold00050 69783 1 G A scaffold4451 Both SNP 0015.scaffold00050 69820 1 T A scaffold4451 ScafM INDEL 0015.scaffold00050 69923 34 .................................. TTGGTTTTTTTTTTTTTTTTTTTGAGGGGACATA scaffold4451 Both SNP 0015.scaffold00050 69964 1 G T scaffold4451 Both SNP 0015.scaffold00050 70021 1 A G scaffold4451 Both SNP 0015.scaffold00050 70068 1 G A scaffold4451 Both SNP 0015.scaffold00050 70195 1 G C scaffold4451 ScafM SNP 0015.scaffold00050 70199 2 TA AT scaffold4451 Both SNP 0015.scaffold00050 70328 1 G C scaffold4451 Both SNP 0015.scaffold00050 70419 1 A T scaffold4451 ReadM SNP 0015.scaffold00050 70545 1 C T - Both SNP 0015.scaffold00050 70581 1 A C scaffold4451 Both SNP 0015.scaffold00050 70598 1 C T scaffold4451 Both SNP 0015.scaffold00050 70774 1 T C scaffold4451 Both SNP 0015.scaffold00050 70794 1 T C scaffold4451 Both SNP 0015.scaffold00050 70817 1 T C scaffold4451 Both SNP 0015.scaffold00050 70882 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 70900 1 G A scaffold4451 Both SNP 0015.scaffold00050 70927 1 A C scaffold4451 ReadM SNP 0015.scaffold00050 71033 1 T A - ReadM INDEL 0015.scaffold00050 71086 2 .. CT - ReadM SNP 0015.scaffold00050 71092 1 C G - ReadM SNP 0015.scaffold00050 71308 1 T C - ReadM SNP 0015.scaffold00050 71449 1 G C - ReadM SNP 0015.scaffold00050 71471 1 A T - ReadM SNP 0015.scaffold00050 71583 1 T C - ReadM INDEL 0015.scaffold00050 71731 1 . T - ReadM SNP 0015.scaffold00050 71779 1 T G - ScafM INDEL 0015.scaffold00050 71806 5 TAGGT ..... scaffold4451 ScafM SNP 0015.scaffold00050 71821 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 71823 1 A G scaffold4451 ScafM SNP 0015.scaffold00050 71829 1 T C scaffold4451 Both SNP 0015.scaffold00050 71859 1 T A scaffold4451 Both SNP 0015.scaffold00050 71903 1 G T scaffold4451 ReadM SNP 0015.scaffold00050 72016 1 A G - ReadM SNP 0015.scaffold00050 72050 1 A G - ReadM SNP 0015.scaffold00050 72085 1 G A - ReadM SNP 0015.scaffold00050 72171 1 T G - ReadM SNP 0015.scaffold00050 72178 1 T G - Both SNP 0015.scaffold00050 72294 1 T A scaffold4451 ScafM SNP 0015.scaffold00050 72363 1 C T scaffold4451 ScafM SNP 0015.scaffold00050 72370 1 T C scaffold4451 ScafM SNP 0015.scaffold00050 72373 1 A G scaffold4451 ScafM INDEL 0015.scaffold00050 72484 1 . G scaffold4451 ScafM INDEL 0015.scaffold00050 72486 8 ........ TCACCAAC scaffold4451 ScafM INDEL 0015.scaffold00050 72490 12 ............ CACCATCAACGC scaffold4451 ScafM INDEL 0015.scaffold00050 72492 2 .. AC scaffold4451 Both SNP 0015.scaffold00050 72514 1 A C scaffold4451 ReadM SNP 0015.scaffold00050 72569 1 T C - ReadM SNP 0015.scaffold00050 72591 1 G A - Both SNP 0015.scaffold00050 72730 1 T G scaffold4451 Both SNP 0015.scaffold00050 72760 1 A G scaffold4451 Both SNP 0015.scaffold00050 72787 1 G A scaffold4451 Both SNP 0015.scaffold00050 72843 1 A C scaffold4451 ScafM SNP 0015.scaffold00050 72858 1 G A scaffold4451 ScafM SNP 0015.scaffold00050 72869 1 C T scaffold4451 Both SNP 0015.scaffold00050 72883 1 A G scaffold4451 Both SNP 0015.scaffold00050 72942 1 A T scaffold4451 Both SNP 0015.scaffold00050 72971 1 T C scaffold4451 Both SNP 0015.scaffold00050 73030 1 A G scaffold4451 ReadM SNP 0015.scaffold00050 73105 1 G A - ReadM SNP 0015.scaffold00050 73133 1 A G - ReadM SNP 0015.scaffold00050 73169 1 T C - Both SNP 0015.scaffold00050 73400 1 G A scaffold4451 Both SNP 0015.scaffold00050 73459 1 C T scaffold4451 ReadM SNP 0015.scaffold00050 73639 1 G A - ReadM SNP 0015.scaffold00050 73683 1 G A - ReadM SNP 0015.scaffold00050 73699 1 G A - ReadM SNP 0015.scaffold00050 73714 1 C A - ReadM SNP 0015.scaffold00050 73878 1 T C - ReadM SNP 0015.scaffold00050 73880 1 C G - ReadM SNP 0015.scaffold00050 74002 1 T C - ScafM SNP 0015.scaffold00050 74191 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74196 1 A G scaffold3225 ScafM SNP 0015.scaffold00050 74217 1 C T scaffold3225 ScafM SNP 0015.scaffold00050 74223 1 T G scaffold3225 ScafM SNP 0015.scaffold00050 74229 1 A G scaffold3225 ScafM SNP 0015.scaffold00050 74234 1 T A scaffold3225 ScafM SNP 0015.scaffold00050 74236 1 C G scaffold3225 ScafM INDEL 0015.scaffold00050 74238 1 . T scaffold3225 ScafM SNP 0015.scaffold00050 74241 1 A G scaffold3225 ScafM SNP 0015.scaffold00050 74243 1 T C scaffold3225 ScafM INDEL 0015.scaffold00050 74248 2 .T GA scaffold3225 ScafM SNP 0015.scaffold00050 74262 1 G C scaffold3225 ScafM SNP 0015.scaffold00050 74269 2 CT TG scaffold3225 ScafM SNP 0015.scaffold00050 74274 2 AG TA scaffold3225 ScafM SNP 0015.scaffold00050 74279 1 T G scaffold3225 ScafM SNP 0015.scaffold00050 74290 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74292 1 G T scaffold3225 ScafM SNP 0015.scaffold00050 74313 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74320 1 C G scaffold3225 ScafM SNP 0015.scaffold00050 74322 2 CA TT scaffold3225 ScafM SNP 0015.scaffold00050 74327 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74341 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74346 1 C T scaffold3225 ScafM SNP 0015.scaffold00050 74356 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74358 1 G T scaffold3225 ScafM SNP 0015.scaffold00050 74364 1 G T scaffold3225 ScafM INDEL 0015.scaffold00050 74367 2 TC .A scaffold3225 ScafM SNP 0015.scaffold00050 74371 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74373 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74382 1 T G scaffold3225 ScafM SNP 0015.scaffold00050 74389 1 A T scaffold3225 ScafM SNP 0015.scaffold00050 74397 1 C T scaffold3225 ScafM SNP 0015.scaffold00050 74400 1 A G scaffold3225 ScafM SNP 0015.scaffold00050 74411 1 T A scaffold3225 ScafM SNP 0015.scaffold00050 74426 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74453 1 C A scaffold3225 ScafM SNP 0015.scaffold00050 74464 1 C T scaffold3225 ScafM SNP 0015.scaffold00050 74477 1 G A scaffold3225 ScafM INDEL 0015.scaffold00050 74482 2 .. TC scaffold3225 ScafM SNP 0015.scaffold00050 74486 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74488 1 G A scaffold3225 ScafM INDEL 0015.scaffold00050 74491 2 .. TT scaffold3225 ScafM SNP 0015.scaffold00050 74502 1 C T scaffold3225 ScafM SNP 0015.scaffold00050 74507 1 G A scaffold3225 ScafM INDEL 0015.scaffold00050 74511 1 A . scaffold3225 ScafM SNP 0015.scaffold00050 74524 2 AT CA scaffold3225 ScafM SNP 0015.scaffold00050 74531 1 G A scaffold3225 ScafM SNP 0015.scaffold00050 74554 1 A T scaffold3225 ScafM SNP 0015.scaffold00050 74564 2 AG GA scaffold3225 ScafM SNP 0015.scaffold00050 74569 1 T C scaffold3225 ScafM SNP 0015.scaffold00050 74571 1 G T scaffold3225 ReadM INDEL 0015.scaffold00050 75618 1 . T - ReadM SNP 0015.scaffold00050 75634 1 T C - ReadM SNP 0015.scaffold00050 75855 1 A T - ReadM SNP 0015.scaffold00050 75895 1 G A - ReadM SNP 0015.scaffold00050 76008 1 G A - ReadM INDEL 0015.scaffold00050 76022 1 T . - ReadM SNP 0015.scaffold00050 76047 1 A G - ReadM SNP 0015.scaffold00050 76092 1 G C - ReadM SNP 0015.scaffold00050 76220 1 G T - ReadM INDEL 0015.scaffold00050 76243 1 . T - ReadM SNP 0015.scaffold00050 76280 1 G T - ReadM SNP 0015.scaffold00050 76317 1 T C - ReadM SNP 0015.scaffold00050 76379 1 G A - ReadM SNP 0015.scaffold00050 76395 1 G A - ReadM SNP 0015.scaffold00050 76470 1 C T - ReadM SNP 0015.scaffold00050 76492 1 C G - ReadM SNP 0015.scaffold00050 76537 1 G T - ReadM SNP 0015.scaffold00050 76542 1 T C - ReadM SNP 0015.scaffold00050 76560 1 G A - ReadM SNP 0015.scaffold00050 76823 1 C G - ReadM SNP 0015.scaffold00050 76869 1 A T - ReadM SNP 0015.scaffold00050 76887 1 A G - ReadM SNP 0015.scaffold00050 76968 1 C T - ReadM SNP 0015.scaffold00050 77117 1 C G - ReadM SNP 0015.scaffold00050 77181 1 A G - ReadM SNP 0015.scaffold00050 77353 1 A G - ReadM SNP 0015.scaffold00050 77359 1 C T - ReadM SNP 0015.scaffold00050 77414 1 G C - ReadM SNP 0015.scaffold00050 77575 1 A G - ReadM SNP 0015.scaffold00050 77603 1 T G - ReadM SNP 0015.scaffold00050 77714 1 C T - ReadM INDEL 0015.scaffold00050 77848 1 A . - ReadM SNP 0015.scaffold00050 77867 1 G T - ReadM SNP 0015.scaffold00050 77880 1 C A - ReadM SNP 0015.scaffold00050 77918 1 T C - ReadM SNP 0015.scaffold00050 77978 1 C A - ReadM SNP 0015.scaffold00050 78005 1 G T - ReadM SNP 0015.scaffold00050 78065 1 C T - ReadM SNP 0015.scaffold00050 78106 1 T C - ReadM SNP 0015.scaffold00050 78168 1 A G - ReadM SNP 0015.scaffold00050 78255 1 G A - ReadM INDEL 0015.scaffold00050 78266 1 . A - ReadM SNP 0015.scaffold00050 78291 1 T A - ReadM SNP 0015.scaffold00050 78352 1 T G - ReadM SNP 0015.scaffold00050 78404 1 G T - ReadM SNP 0015.scaffold00050 78511 1 T A - ReadM SNP 0015.scaffold00050 78660 1 A G - ReadM INDEL 0015.scaffold00050 78690 2 TA .. - ReadM SNP 0015.scaffold00050 78770 1 A T - ReadM SNP 0015.scaffold00050 78977 1 T C - ReadM SNP 0015.scaffold00050 79045 1 T C - ReadM SNP 0015.scaffold00050 79049 1 C G - ReadM SNP 0015.scaffold00050 79122 1 A G - ReadM SNP 0015.scaffold00050 79126 1 G T - ReadM SNP 0015.scaffold00050 79149 1 T A - ReadM SNP 0015.scaffold00050 79580 1 G A - ReadM SNP 0015.scaffold00050 79656 1 G A - ReadM SNP 0015.scaffold00050 80140 1 T A - ReadM SNP 0015.scaffold00050 80171 1 A C - ReadM SNP 0015.scaffold00050 80193 1 G A - ReadM SNP 0015.scaffold00050 80234 1 C G - ReadM SNP 0015.scaffold00050 80348 1 C T - ReadM SNP 0015.scaffold00050 80555 1 A G - ReadM SNP 0015.scaffold00050 80581 1 G C - ReadM SNP 0015.scaffold00050 80642 1 C T - ReadM SNP 0015.scaffold00050 80748 1 A C - ReadM SNP 0015.scaffold00050 80767 1 A T - ReadM SNP 0015.scaffold00050 80774 1 A G - ReadM SNP 0015.scaffold00050 80860 1 C T - ReadM SNP 0015.scaffold00050 80965 1 C T - ReadM SNP 0015.scaffold00050 81005 1 T A - ReadM SNP 0015.scaffold00050 81092 1 T G - ReadM SNP 0015.scaffold00050 81098 1 A G - ReadM SNP 0015.scaffold00050 81173 1 C A - ReadM SNP 0015.scaffold00050 81177 1 C G - ReadM SNP 0015.scaffold00050 81290 1 C G - ReadM SNP 0015.scaffold00050 81302 1 G A - ReadM SNP 0015.scaffold00050 81306 1 C A - ReadM SNP 0015.scaffold00050 81340 1 A G - ReadM SNP 0015.scaffold00050 81390 1 C T - ReadM SNP 0015.scaffold00050 81408 1 T C - ReadM SNP 0015.scaffold00050 81497 1 A C - ReadM SNP 0015.scaffold00050 81526 1 C T - ReadM SNP 0015.scaffold00050 81539 1 G C - ReadM INDEL 0015.scaffold00050 81615 2 AA .. - ReadM SNP 0015.scaffold00050 81632 1 T C - ReadM SNP 0015.scaffold00050 81685 1 G A - ReadM SNP 0015.scaffold00050 81778 1 A G - ReadM SNP 0015.scaffold00050 81789 1 T C - ReadM SNP 0015.scaffold00050 81907 1 A G - ReadM SNP 0015.scaffold00050 81934 1 T C - ReadM SNP 0015.scaffold00050 81988 1 T C - ReadM SNP 0015.scaffold00050 82024 1 C A - ReadM SNP 0015.scaffold00050 82032 1 G T - ReadM SNP 0015.scaffold00050 82118 1 T A - ReadM SNP 0015.scaffold00050 82162 1 A G - ReadM SNP 0015.scaffold00050 82169 1 T C - ReadM SNP 0015.scaffold00050 82194 1 T C - ReadM SNP 0015.scaffold00050 82207 1 T G - ReadM SNP 0015.scaffold00050 82341 1 G A - ReadM SNP 0015.scaffold00050 82500 1 A G - ReadM SNP 0015.scaffold00050 82531 1 G A - ReadM SNP 0015.scaffold00050 82624 1 A T - ReadM SNP 0015.scaffold00050 82644 1 T C - ReadM SNP 0015.scaffold00050 82726 1 A C - ReadM SNP 0015.scaffold00050 82743 1 C T - ReadM SNP 0015.scaffold00050 82782 1 A G - ReadM SNP 0015.scaffold00050 82861 1 T C - ReadM SNP 0015.scaffold00050 82892 1 C T - ReadM SNP 0015.scaffold00050 83075 1 T A - ReadM SNP 0015.scaffold00050 83082 1 A G - ReadM SNP 0015.scaffold00050 83097 1 G A - ReadM SNP 0015.scaffold00050 83306 1 C T - ReadM SNP 0015.scaffold00050 84816 1 C T - ReadM SNP 0015.scaffold00050 84865 1 G A - ReadM SNP 0015.scaffold00050 85022 1 C T - ReadM SNP 0015.scaffold00050 85045 1 G A - ReadM SNP 0015.scaffold00050 85135 1 G T - ReadM SNP 0015.scaffold00050 85141 1 T C - ReadM SNP 0015.scaffold00050 85333 1 C A - ScafM SNP 0015.scaffold00050 86755 1 A T scaffold618 ScafM SNP 0015.scaffold00050 86827 1 G T scaffold618 ScafM SNP 0015.scaffold00050 86852 1 T C scaffold618 ScafM SNP 0015.scaffold00050 86862 1 C T scaffold618 ScafM INDEL 0015.scaffold00050 86898 5 TTCGG ..... scaffold618 ScafM INDEL 0015.scaffold00050 86906 5 TGAGC ..... scaffold618 ScafM SNP 0015.scaffold00050 86931 1 A C scaffold618 ScafM INDEL 0015.scaffold00050 86935 11 ........... ATATTGACTGT scaffold618 ScafM INDEL 0015.scaffold00050 86949 1 . T scaffold618 ScafM INDEL 0015.scaffold00050 86952 1 . T scaffold618 ScafM SNP 0015.scaffold00050 86978 1 C T scaffold618 ScafM SNP 0015.scaffold00050 86994 1 T C scaffold618 ScafM SNP 0015.scaffold00050 87039 1 G A scaffold618 ScafM SNP 0015.scaffold00050 87082 1 G T scaffold618 ScafM SNP 0015.scaffold00050 87089 1 C G scaffold618 ScafM SNP 0015.scaffold00050 87099 1 G A scaffold618 ScafM SNP 0015.scaffold00050 87111 1 G A scaffold618 ReadM SNP 0015.scaffold00050 87876 1 G C - ReadM SNP 0015.scaffold00050 87878 1 T C - ReadM SNP 0015.scaffold00050 88059 1 T A - ReadM SNP 0015.scaffold00050 88120 1 A G - ReadM SNP 0015.scaffold00050 88151 1 A C - ReadM SNP 0015.scaffold00050 88221 1 G A - ReadM SNP 0015.scaffold00050 88232 1 C T - ReadM SNP 0015.scaffold00050 88336 1 C A - ReadM SNP 0015.scaffold00050 88434 1 T C - ReadM SNP 0015.scaffold00050 88479 1 G T - ReadM SNP 0015.scaffold00050 88483 1 A G - ReadM SNP 0015.scaffold00050 88523 1 G A - ReadM SNP 0015.scaffold00050 88624 1 G A - ReadM SNP 0015.scaffold00050 88637 1 T C - ReadM SNP 0015.scaffold00050 88852 1 A G - ReadM SNP 0015.scaffold00050 89088 1 T C - ReadM INDEL 0015.scaffold00050 89144 1 . C - ReadM SNP 0015.scaffold00050 89150 1 G T - ReadM SNP 0015.scaffold00050 89195 1 A G - ReadM SNP 0015.scaffold00050 89229 1 C T - ReadM SNP 0015.scaffold00050 89261 1 A G - ReadM SNP 0015.scaffold00050 89268 1 C T - ReadM SNP 0015.scaffold00050 89320 1 T C - ReadM SNP 0015.scaffold00050 89354 1 G C - ReadM SNP 0015.scaffold00050 89356 1 T C - ReadM SNP 0015.scaffold00050 89462 1 T C - ReadM SNP 0015.scaffold00050 89541 1 C T - ReadM SNP 0015.scaffold00050 89545 1 T C - ReadM SNP 0015.scaffold00050 89623 1 C A - ReadM SNP 0015.scaffold00050 89632 1 T G - ReadM SNP 0015.scaffold00050 89638 1 T C - ReadM SNP 0015.scaffold00050 89757 1 C T - ReadM SNP 0015.scaffold00050 89766 1 A C - ReadM SNP 0015.scaffold00050 89779 1 A G - ReadM SNP 0015.scaffold00050 89833 1 G A - ReadM SNP 0015.scaffold00050 89877 1 A G - ReadM SNP 0015.scaffold00050 89881 1 G A - ReadM SNP 0015.scaffold00050 90068 1 A G - ReadM SNP 0015.scaffold00050 90077 1 G A - ReadM SNP 0015.scaffold00050 90176 1 A G - ReadM SNP 0015.scaffold00050 90196 1 G A - ReadM SNP 0015.scaffold00050 90212 1 A G - ReadM SNP 0015.scaffold00050 90275 1 T C - ReadM SNP 0015.scaffold00050 90298 1 T A - ReadM SNP 0015.scaffold00050 90378 1 T A - ReadM INDEL 0015.scaffold00050 90885 1 . T - ReadM SNP 0015.scaffold00050 90919 1 A C - ReadM SNP 0015.scaffold00050 90999 1 C G - ScafM SNP 0015.scaffold00050 105121 1 G T scaffold3978 ScafM INDEL 0015.scaffold00050 105168 1 . A scaffold3978 ScafM INDEL 0015.scaffold00050 105197 12 ............ AAAAATTAAAAA scaffold3978 ScafM SNP 0015.scaffold00050 105241 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 105264 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 105275 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 105319 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 105324 1 G A scaffold3978 ScafM INDEL 0015.scaffold00050 105332 1 . C scaffold3978 ScafM SNP 0015.scaffold00050 105415 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 105505 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 105520 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 105524 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 105577 1 G C scaffold3978 ScafM SNP 0015.scaffold00050 105598 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 105602 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 105618 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 105672 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 105692 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 105701 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 105707 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 105724 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 105736 1 T A scaffold3978 ScafM INDEL 0015.scaffold00050 109366 2 TT .. scaffold3978 ScafM SNP 0015.scaffold00050 109396 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 110122 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 110125 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 110268 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 110275 1 T C scaffold3978 ScafM INDEL 0015.scaffold00050 110278 2 .. AA scaffold3978 ScafM SNP 0015.scaffold00050 110300 1 C G scaffold3978 ScafM INDEL 0015.scaffold00050 110400 1 . A scaffold3978 ScafM SNP 0015.scaffold00050 110402 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 110437 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 110440 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 110445 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 110453 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 110495 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 110497 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 110540 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 110589 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 110705 2 AG CC scaffold3978 ScafM SNP 0015.scaffold00050 123576 1 A C scaffold3978 ScafM INDEL 0015.scaffold00050 123721 1 . A scaffold3978 ScafM SNP 0015.scaffold00050 123781 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 123787 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 123820 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 123839 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 123851 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 123853 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 123887 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 123895 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 123943 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 123985 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 124021 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 124209 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 124223 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 124248 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 124313 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 124346 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 124368 1 G C scaffold3978 Both SNP 0015.scaffold00050 124418 1 G A scaffold3978 Both SNP 0015.scaffold00050 124476 1 C T scaffold3978 Both SNP 0015.scaffold00050 124504 1 A C scaffold3978 Both SNP 0015.scaffold00050 124562 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 124616 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 124619 2 CA GT scaffold3978 ScafM SNP 0015.scaffold00050 124634 1 C G scaffold3978 ScafM INDEL 0015.scaffold00050 124701 3 .TC CAT scaffold3978 ScafM SNP 0015.scaffold00050 124719 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 124721 1 C T scaffold3978 Both SNP 0015.scaffold00050 124744 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 124797 1 C T scaffold3978 Both SNP 0015.scaffold00050 124821 1 C A scaffold3978 Both SNP 0015.scaffold00050 124890 1 G A scaffold3978 Both SNP 0015.scaffold00050 124912 1 C G scaffold3978 Both SNP 0015.scaffold00050 124924 1 G A scaffold3978 Both SNP 0015.scaffold00050 124971 1 G A scaffold3978 Both SNP 0015.scaffold00050 125010 1 T C scaffold3978 Both SNP 0015.scaffold00050 125035 1 T G scaffold3978 Both SNP 0015.scaffold00050 125071 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 125096 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 125120 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 125157 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 125170 2 CA GT scaffold3978 ScafM SNP 0015.scaffold00050 125181 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 125212 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 125217 1 T A scaffold3978 Both SNP 0015.scaffold00050 125265 1 G C scaffold3978 Both SNP 0015.scaffold00050 125331 1 A C scaffold3978 ReadM SNP 0015.scaffold00050 125402 1 T C - ReadM SNP 0015.scaffold00050 125509 1 T C - ReadM INDEL 0015.scaffold00050 125546 1 C . - ReadM SNP 0015.scaffold00050 125580 1 T C - ReadM SNP 0015.scaffold00050 125714 1 A T - ReadM SNP 0015.scaffold00050 125722 1 T C - ReadM SNP 0015.scaffold00050 125751 1 A G - ReadM SNP 0015.scaffold00050 125802 1 C G - ReadM SNP 0015.scaffold00050 125807 1 G A - ReadM SNP 0015.scaffold00050 125857 1 A T - ReadM SNP 0015.scaffold00050 125893 1 A G - ReadM SNP 0015.scaffold00050 125928 1 A G - ReadM SNP 0015.scaffold00050 126013 1 A T - ReadM SNP 0015.scaffold00050 126041 1 C T - ReadM SNP 0015.scaffold00050 126044 1 A G - ReadM SNP 0015.scaffold00050 126101 1 G A - ReadM SNP 0015.scaffold00050 126199 1 A G - ReadM SNP 0015.scaffold00050 126328 1 G C - ReadM SNP 0015.scaffold00050 126380 1 G A - ReadM INDEL 0015.scaffold00050 126383 1 . T - ReadM SNP 0015.scaffold00050 126415 1 T G - ReadM SNP 0015.scaffold00050 126459 1 T C - ReadM INDEL 0015.scaffold00050 126492 1 G . - ReadM SNP 0015.scaffold00050 126498 1 C T - ReadM SNP 0015.scaffold00050 126556 1 T A - ReadM INDEL 0015.scaffold00050 126590 1 T . - ReadM SNP 0015.scaffold00050 126611 1 G A - ReadM SNP 0015.scaffold00050 126630 1 A G - ReadM SNP 0015.scaffold00050 126641 1 A T - ReadM SNP 0015.scaffold00050 127088 1 C T - ReadM SNP 0015.scaffold00050 127404 1 G A - ReadM SNP 0015.scaffold00050 127417 1 T A - ReadM SNP 0015.scaffold00050 127491 1 C A - ReadM SNP 0015.scaffold00050 127622 1 A T - ReadM SNP 0015.scaffold00050 127626 1 A G - ReadM SNP 0015.scaffold00050 127665 1 G A - ReadM SNP 0015.scaffold00050 127692 1 T C - ReadM SNP 0015.scaffold00050 127769 1 C G - ReadM INDEL 0015.scaffold00050 127852 1 T . - ReadM SNP 0015.scaffold00050 127857 1 A G - ReadM SNP 0015.scaffold00050 127882 1 A G - ReadM SNP 0015.scaffold00050 128046 1 C T - ReadM SNP 0015.scaffold00050 128077 1 A G - ReadM SNP 0015.scaffold00050 128111 1 C T - ReadM SNP 0015.scaffold00050 128138 1 G A - ReadM SNP 0015.scaffold00050 128168 1 A G - ReadM SNP 0015.scaffold00050 128200 1 G C - ReadM SNP 0015.scaffold00050 128375 1 C A - ReadM SNP 0015.scaffold00050 128410 1 G A - ReadM SNP 0015.scaffold00050 128523 1 T G - ReadM SNP 0015.scaffold00050 128604 1 A C - ReadM SNP 0015.scaffold00050 128707 1 T C - ReadM SNP 0015.scaffold00050 128724 1 G C - ReadM SNP 0015.scaffold00050 128896 1 G A - ReadM SNP 0015.scaffold00050 128922 1 A C - ReadM SNP 0015.scaffold00050 129052 1 A G - ReadM SNP 0015.scaffold00050 129110 1 G T - ReadM INDEL 0015.scaffold00050 129325 1 A . - ReadM SNP 0015.scaffold00050 129343 1 C T - ReadM SNP 0015.scaffold00050 129376 1 G A - ReadM SNP 0015.scaffold00050 129863 1 A T - ReadM SNP 0015.scaffold00050 129926 1 C T - ReadM SNP 0015.scaffold00050 129951 1 T C - ReadM SNP 0015.scaffold00050 129977 1 C T - ReadM SNP 0015.scaffold00050 130003 1 T C - ReadM INDEL 0015.scaffold00050 130037 1 T . - ReadM SNP 0015.scaffold00050 130107 1 A G - ReadM SNP 0015.scaffold00050 130112 1 T G - ReadM SNP 0015.scaffold00050 130158 1 G C - ReadM SNP 0015.scaffold00050 130227 1 C G - ReadM SNP 0015.scaffold00050 130287 1 T G - ReadM SNP 0015.scaffold00050 130311 1 G T - ReadM SNP 0015.scaffold00050 130421 1 G A - ReadM SNP 0015.scaffold00050 130452 1 A T - ReadM SNP 0015.scaffold00050 130472 1 G T - ReadM SNP 0015.scaffold00050 130570 1 G C - ReadM SNP 0015.scaffold00050 130600 1 T C - ReadM SNP 0015.scaffold00050 130614 1 G T - ReadM SNP 0015.scaffold00050 130628 1 G T - ReadM SNP 0015.scaffold00050 130944 1 A G - ReadM SNP 0015.scaffold00050 130957 1 T C - ReadM SNP 0015.scaffold00050 130965 1 A C - ScafM SNP 0015.scaffold00050 131017 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 131044 2 AC GT scaffold3978 ScafM SNP 0015.scaffold00050 131060 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 131070 1 C G scaffold3978 Both SNP 0015.scaffold00050 131123 1 C T scaffold3978 Both SNP 0015.scaffold00050 131129 1 C A scaffold3978 Both SNP 0015.scaffold00050 131161 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 131252 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 131262 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 131266 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 131276 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 131329 2 AC TT scaffold3978 ScafM SNP 0015.scaffold00050 131337 1 A C scaffold3978 Both SNP 0015.scaffold00050 131514 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 131583 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 131625 3 GAA ATT scaffold3978 ScafM INDEL 0015.scaffold00050 131630 2 GG .T scaffold3978 ScafM SNP 0015.scaffold00050 131633 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 131665 1 C T scaffold3978 ScafM INDEL 0015.scaffold00050 131723 4 GGAA .... scaffold3978 ScafM SNP 0015.scaffold00050 131738 1 C T scaffold3978 Both SNP 0015.scaffold00050 131941 1 T C scaffold3978 Both SNP 0015.scaffold00050 131952 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 131958 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 131990 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 132042 2 GG AA scaffold3978 ReadM SNP 0015.scaffold00050 132161 1 A G - ReadM SNP 0015.scaffold00050 132170 1 C T - ReadM SNP 0015.scaffold00050 132420 1 A G - ReadM SNP 0015.scaffold00050 132441 1 A G - ReadM SNP 0015.scaffold00050 132648 1 G T - ReadM SNP 0015.scaffold00050 132719 1 A C - ReadM SNP 0015.scaffold00050 132722 1 A C - ReadM SNP 0015.scaffold00050 132733 1 C T - ReadM SNP 0015.scaffold00050 132767 1 T C - ReadM SNP 0015.scaffold00050 132863 1 T G - ReadM SNP 0015.scaffold00050 132903 1 A T - ReadM SNP 0015.scaffold00050 132978 1 G C - ReadM SNP 0015.scaffold00050 133024 1 C T - ScafM SNP 0015.scaffold00050 133055 1 T G scaffold3978 Both SNP 0015.scaffold00050 133060 1 T C scaffold3978 Both SNP 0015.scaffold00050 133081 1 C A scaffold3978 Both SNP 0015.scaffold00050 133149 1 G T scaffold3978 Both SNP 0015.scaffold00050 133216 1 G T scaffold3978 Both SNP 0015.scaffold00050 133240 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 133272 2 GA AC scaffold3978 ReadM SNP 0015.scaffold00050 133297 1 T A - ScafM SNP 0015.scaffold00050 133340 2 TA CG scaffold3978 Both SNP 0015.scaffold00050 133424 1 A G scaffold3978 Both SNP 0015.scaffold00050 133429 1 G T scaffold3978 Both SNP 0015.scaffold00050 133435 1 A G scaffold3978 Both SNP 0015.scaffold00050 133483 1 G A scaffold3978 Both SNP 0015.scaffold00050 133524 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 133550 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 133558 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 133586 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 134329 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 134332 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 134334 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 134408 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 134411 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 134562 1 T C scaffold3978 ScafM INDEL 0015.scaffold00050 134581 5 ..... AGGCC scaffold3978 ScafM SNP 0015.scaffold00050 134635 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 134650 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 134702 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 134775 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 134799 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 134831 1 C T scaffold3978 Both SNP 0015.scaffold00050 134851 1 G C scaffold3978 Both INDEL 0015.scaffold00050 134859 1 . A scaffold3978 Both SNP 0015.scaffold00050 134896 1 G C scaffold3978 Both SNP 0015.scaffold00050 134954 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 135005 2 CG TC scaffold3978 Both SNP 0015.scaffold00050 135107 1 T C scaffold3978 Both SNP 0015.scaffold00050 135168 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 135211 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 135216 1 G C scaffold3978 ScafM SNP 0015.scaffold00050 135226 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 135242 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 135245 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 135271 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 135277 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 135279 1 G A scaffold3978 ScafM INDEL 0015.scaffold00050 135311 1 . A scaffold3978 ScafM INDEL 0015.scaffold00050 135356 3 TGT ... scaffold3978 Both INDEL 0015.scaffold00050 135371 1 G . scaffold3978 Both SNP 0015.scaffold00050 135385 1 C T scaffold3978 Both SNP 0015.scaffold00050 135464 1 A T scaffold3978 Both SNP 0015.scaffold00050 135476 1 C T scaffold3978 Both SNP 0015.scaffold00050 135530 1 T A scaffold3978 Both SNP 0015.scaffold00050 135533 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 135578 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 135586 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 135597 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 135608 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 135620 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 135629 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 135632 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 135671 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 135704 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 135713 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 135729 1 C A scaffold3978 ReadM SNP 0015.scaffold00050 135817 1 G A - ReadM SNP 0015.scaffold00050 136296 1 G T - ReadM SNP 0015.scaffold00050 136302 1 G A - ReadM SNP 0015.scaffold00050 136332 1 G T - ReadM SNP 0015.scaffold00050 136471 1 A G - ReadM SNP 0015.scaffold00050 136509 1 T C - ReadM SNP 0015.scaffold00050 136620 1 A C - ReadM SNP 0015.scaffold00050 136629 1 G A - ReadM SNP 0015.scaffold00050 136716 1 A T - ReadM INDEL 0015.scaffold00050 136719 1 T . - ReadM SNP 0015.scaffold00050 136870 1 A G - ReadM SNP 0015.scaffold00050 136875 1 T C - ReadM SNP 0015.scaffold00050 136888 1 C A - ReadM SNP 0015.scaffold00050 136962 1 T G - ReadM SNP 0015.scaffold00050 136971 1 A G - ReadM SNP 0015.scaffold00050 137037 1 A C - ReadM SNP 0015.scaffold00050 137061 1 A G - ReadM SNP 0015.scaffold00050 137083 1 T C - ReadM SNP 0015.scaffold00050 137091 1 T C - ReadM SNP 0015.scaffold00050 137208 1 T C - ReadM SNP 0015.scaffold00050 137325 1 G C - ReadM SNP 0015.scaffold00050 137348 1 C T - ReadM SNP 0015.scaffold00050 137382 1 C T - ReadM SNP 0015.scaffold00050 137580 1 C T - ReadM SNP 0015.scaffold00050 137620 1 T C - ReadM SNP 0015.scaffold00050 137661 1 T C - ReadM SNP 0015.scaffold00050 137682 1 C T - ReadM SNP 0015.scaffold00050 137713 1 C T - ReadM SNP 0015.scaffold00050 137852 1 G A - ReadM SNP 0015.scaffold00050 137885 1 G C - ReadM SNP 0015.scaffold00050 137961 1 G A - ReadM SNP 0015.scaffold00050 137981 1 A G - ReadM SNP 0015.scaffold00050 137997 1 G A - ReadM SNP 0015.scaffold00050 138064 1 C A - ReadM SNP 0015.scaffold00050 138120 1 G A - ReadM SNP 0015.scaffold00050 138143 1 A G - ReadM SNP 0015.scaffold00050 138252 1 C T - ReadM SNP 0015.scaffold00050 138259 1 C T - ReadM SNP 0015.scaffold00050 138273 1 G A - ReadM SNP 0015.scaffold00050 138317 1 C A - ReadM SNP 0015.scaffold00050 138386 1 G T - ReadM SNP 0015.scaffold00050 138471 1 G A - ReadM SNP 0015.scaffold00050 138530 1 G A - ReadM SNP 0015.scaffold00050 138595 1 T A - ReadM SNP 0015.scaffold00050 138612 1 T C - ReadM INDEL 0015.scaffold00050 138685 1 . T - ScafM INDEL 0015.scaffold00050 138685 2 .G TT scaffold3978 Both SNP 0015.scaffold00050 138709 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 138764 1 C A scaffold3978 Both SNP 0015.scaffold00050 138813 1 C T scaffold3978 Both SNP 0015.scaffold00050 138821 1 C A scaffold3978 Both SNP 0015.scaffold00050 138830 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 138889 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 138909 2 GG AC scaffold3978 ScafM SNP 0015.scaffold00050 138912 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 138916 1 G A scaffold3978 Both SNP 0015.scaffold00050 138961 1 G A scaffold3978 Both SNP 0015.scaffold00050 138977 1 A G scaffold3978 Both SNP 0015.scaffold00050 139011 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 139024 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 139044 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 139053 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 139064 3 CAT TGC scaffold3978 ScafM SNP 0015.scaffold00050 139069 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 139071 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 139088 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 139095 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 139099 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 139116 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 139121 1 T G scaffold3978 ScafM INDEL 0015.scaffold00050 139138 1 C . scaffold3978 ScafM SNP 0015.scaffold00050 139143 1 G T scaffold3978 ScafM INDEL 0015.scaffold00050 139148 1 . A scaffold3978 Both SNP 0015.scaffold00050 139162 1 A C scaffold3978 ReadM SNP 0015.scaffold00050 139240 1 T C - ReadM SNP 0015.scaffold00050 139252 1 G T - ReadM SNP 0015.scaffold00050 139284 1 C T - ReadM SNP 0015.scaffold00050 139738 1 G A - ReadM SNP 0015.scaffold00050 139789 1 T C - ReadM INDEL 0015.scaffold00050 139847 1 . C - ReadM SNP 0015.scaffold00050 139854 1 A G - ReadM SNP 0015.scaffold00050 139923 1 G A - ReadM SNP 0015.scaffold00050 139953 1 G A - ReadM SNP 0015.scaffold00050 139993 1 T C - ReadM SNP 0015.scaffold00050 140063 1 T A - ReadM SNP 0015.scaffold00050 140102 1 T C - Both SNP 0015.scaffold00050 140157 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 140173 2 TT AA scaffold3978 ScafM SNP 0015.scaffold00050 140186 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 140192 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 140197 1 A G scaffold3978 Both SNP 0015.scaffold00050 140251 1 G A scaffold3978 ScafM INDEL 0015.scaffold00050 140336 2 AT .. scaffold3978 ScafM INDEL 0015.scaffold00050 140345 3 TTT ... scaffold3978 ScafM INDEL 0015.scaffold00050 140396 5 AAAAC ..... scaffold3978 ScafM SNP 0015.scaffold00050 140425 1 A G scaffold3978 Both SNP 0015.scaffold00050 140445 1 A G scaffold3978 Both SNP 0015.scaffold00050 140516 1 T C scaffold3978 ReadM SNP 0015.scaffold00050 140561 1 A C - ReadM SNP 0015.scaffold00050 140592 1 T A - ReadM SNP 0015.scaffold00050 140605 1 T C - Both SNP 0015.scaffold00050 140719 1 C T scaffold3978 Both SNP 0015.scaffold00050 140736 1 T C scaffold3978 Both SNP 0015.scaffold00050 140738 1 A C scaffold3978 ReadM SNP 0015.scaffold00050 141029 1 C T - ReadM SNP 0015.scaffold00050 141064 1 G T - Both SNP 0015.scaffold00050 141326 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 141371 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 141377 2 CA AT scaffold3978 ScafM SNP 0015.scaffold00050 141398 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 141403 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 141410 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 141437 2 AG TT scaffold3978 ScafM SNP 0015.scaffold00050 141480 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 141508 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 141512 1 A G scaffold3978 ReadM SNP 0015.scaffold00050 141682 1 T C - ReadM SNP 0015.scaffold00050 143084 1 A G - ReadM SNP 0015.scaffold00050 143104 1 C T - ReadM SNP 0015.scaffold00050 143189 1 C T - ReadM SNP 0015.scaffold00050 143204 1 A C - ReadM SNP 0015.scaffold00050 143288 1 T G - ReadM SNP 0015.scaffold00050 143387 1 A C - ReadM SNP 0015.scaffold00050 143409 1 G A - ReadM SNP 0015.scaffold00050 143502 1 A G - ReadM SNP 0015.scaffold00050 143523 1 C T - ReadM SNP 0015.scaffold00050 143596 1 C A - ReadM SNP 0015.scaffold00050 143647 1 T C - ReadM SNP 0015.scaffold00050 143697 1 A C - ReadM SNP 0015.scaffold00050 143770 1 C T - ReadM SNP 0015.scaffold00050 143804 1 A G - ReadM SNP 0015.scaffold00050 143812 1 G A - ReadM SNP 0015.scaffold00050 143867 1 C T - ReadM SNP 0015.scaffold00050 143926 1 T C - ReadM SNP 0015.scaffold00050 143952 1 A G - ReadM SNP 0015.scaffold00050 143981 1 T G - ReadM SNP 0015.scaffold00050 144150 1 T C - ReadM SNP 0015.scaffold00050 144173 1 G A - ReadM SNP 0015.scaffold00050 144197 1 A T - ReadM SNP 0015.scaffold00050 144276 1 A G - ReadM SNP 0015.scaffold00050 144287 1 G C - ReadM SNP 0015.scaffold00050 144364 1 G A - ReadM SNP 0015.scaffold00050 144404 1 T A - ReadM SNP 0015.scaffold00050 144413 1 A G - ReadM SNP 0015.scaffold00050 144451 1 T G - ReadM SNP 0015.scaffold00050 144483 1 G A - ReadM SNP 0015.scaffold00050 144486 1 A G - ReadM SNP 0015.scaffold00050 144574 1 T C - ReadM INDEL 0015.scaffold00050 144616 1 . T - ReadM SNP 0015.scaffold00050 144634 1 T C - ReadM SNP 0015.scaffold00050 144706 1 A C - ReadM SNP 0015.scaffold00050 144714 1 C T - ReadM SNP 0015.scaffold00050 144766 1 T C - ReadM SNP 0015.scaffold00050 144777 1 G A - ReadM SNP 0015.scaffold00050 144931 1 A G - ReadM SNP 0015.scaffold00050 144938 1 G T - Both SNP 0015.scaffold00050 144998 1 C T scaffold3978 ReadM SNP 0015.scaffold00050 145051 1 G C - ReadM SNP 0015.scaffold00050 145102 1 G A - ReadM SNP 0015.scaffold00050 145114 1 T A - ReadM SNP 0015.scaffold00050 145202 1 G A - ReadM SNP 0015.scaffold00050 145294 1 C G - ReadM SNP 0015.scaffold00050 145299 1 G A - ReadM SNP 0015.scaffold00050 145311 1 A G - ReadM SNP 0015.scaffold00050 145388 1 G C - ReadM SNP 0015.scaffold00050 145409 1 T G - ReadM SNP 0015.scaffold00050 145414 1 A G - ReadM SNP 0015.scaffold00050 145487 1 G A - ReadM SNP 0015.scaffold00050 145496 1 C T - ReadM SNP 0015.scaffold00050 145524 1 C T - ReadM SNP 0015.scaffold00050 145583 1 T C - ReadM SNP 0015.scaffold00050 145661 1 G A - ReadM SNP 0015.scaffold00050 145702 1 A G - ReadM SNP 0015.scaffold00050 145727 1 A T - ReadM SNP 0015.scaffold00050 145774 1 C T - ReadM SNP 0015.scaffold00050 145805 1 C T - ReadM SNP 0015.scaffold00050 145838 1 A T - ReadM SNP 0015.scaffold00050 145867 1 G T - ReadM SNP 0015.scaffold00050 145916 1 T G - ReadM SNP 0015.scaffold00050 145935 1 G A - ScafM SNP 0015.scaffold00050 145965 1 A T scaffold3978 Both SNP 0015.scaffold00050 146012 1 C G scaffold3978 Both SNP 0015.scaffold00050 146027 1 C T scaffold3978 Both SNP 0015.scaffold00050 146092 1 C T scaffold3978 Both SNP 0015.scaffold00050 146149 1 C A scaffold3978 Both SNP 0015.scaffold00050 146171 1 C T scaffold3978 Both SNP 0015.scaffold00050 146173 1 G T scaffold3978 ReadM SNP 0015.scaffold00050 146245 1 T C - ReadM SNP 0015.scaffold00050 146260 1 G A - ReadM INDEL 0015.scaffold00050 146270 1 A . - ScafM SNP 0015.scaffold00050 146313 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 146315 1 G A scaffold3978 Both SNP 0015.scaffold00050 146335 1 G A scaffold3978 Both SNP 0015.scaffold00050 146366 1 G A scaffold3978 ReadM SNP 0015.scaffold00050 146503 1 G C - Both SNP 0015.scaffold00050 146573 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 146580 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 146589 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 146596 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 146603 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 146629 1 T A scaffold3978 ScafM INDEL 0015.scaffold00050 146642 1 . C scaffold3978 Both SNP 0015.scaffold00050 146686 1 G A scaffold3978 Both SNP 0015.scaffold00050 146703 1 A G scaffold3978 Both SNP 0015.scaffold00050 146730 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 146793 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 146798 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 146808 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 146819 1 C T scaffold3978 ReadM SNP 0015.scaffold00050 148376 1 T G - ReadM SNP 0015.scaffold00050 148392 1 A G - ReadM INDEL 0015.scaffold00050 148400 1 A . - ReadM SNP 0015.scaffold00050 148539 1 T C - ReadM SNP 0015.scaffold00050 148573 1 C G - ReadM SNP 0015.scaffold00050 148683 1 T C - Both SNP 0015.scaffold00050 149756 1 T G scaffold3978 Both SNP 0015.scaffold00050 149764 1 G C scaffold3978 Both SNP 0015.scaffold00050 149840 1 G C scaffold3978 Both SNP 0015.scaffold00050 149878 1 C A scaffold3978 Both SNP 0015.scaffold00050 149938 1 A G scaffold3978 ReadM SNP 0015.scaffold00050 149981 1 T A - ReadM SNP 0015.scaffold00050 150059 1 A G - ReadM SNP 0015.scaffold00050 150147 1 T G - ReadM SNP 0015.scaffold00050 150210 1 T C - ReadM SNP 0015.scaffold00050 150274 1 T C - ReadM INDEL 0015.scaffold00050 150343 1 . G - ReadM SNP 0015.scaffold00050 150411 1 A C - ReadM SNP 0015.scaffold00050 150533 1 A C - ReadM SNP 0015.scaffold00050 150565 1 T G - ReadM SNP 0015.scaffold00050 150788 1 G A - ReadM SNP 0015.scaffold00050 150806 1 T C - ReadM SNP 0015.scaffold00050 150843 1 T C - ReadM SNP 0015.scaffold00050 155012 1 C A - ReadM SNP 0015.scaffold00050 155056 1 C T - ReadM SNP 0015.scaffold00050 155252 1 T A - ReadM SNP 0015.scaffold00050 155275 1 G C - ReadM SNP 0015.scaffold00050 155384 1 C T - ReadM SNP 0015.scaffold00050 155406 1 C T - ScafM SNP 0015.scaffold00050 155706 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 155731 1 C A scaffold3978 ScafM SNP 0015.scaffold00050 155897 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 156038 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 156047 1 C T scaffold3978 ScafM INDEL 0015.scaffold00050 156049 4 .... TTTC scaffold3978 ScafM SNP 0015.scaffold00050 156078 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 156092 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 156144 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 156154 1 G C scaffold3978 ScafM SNP 0015.scaffold00050 156229 1 A G scaffold3978 ScafM INDEL 0015.scaffold00050 156257 1 . T scaffold3978 ScafM SNP 0015.scaffold00050 156259 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 156273 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 156292 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 156317 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 156355 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 156373 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 156377 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 156402 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 156416 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 156438 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 156471 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 176857 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 176881 1 C G scaffold3978 ScafM INDEL 0015.scaffold00050 176900 81 ................................................................................. TGATTTGAGTCATATTTTCATAATGCCTAAGAAAGTTCACAGAGAAATCCAGAAATTACGTAGAATCTATATATCTCTTGA scaffold3978 ScafM SNP 0015.scaffold00050 177049 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 177054 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 177150 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 177252 1 T A scaffold3978 ScafM SNP 0015.scaffold00050 177269 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 177322 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 177329 1 T G scaffold3978 ScafM SNP 0015.scaffold00050 177612 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 177619 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 177625 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 177638 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 177654 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 177675 1 C T scaffold3978 ScafM SNP 0015.scaffold00050 177692 1 A T scaffold3978 ScafM INDEL 0015.scaffold00050 177705 1 . A scaffold3978 ScafM SNP 0015.scaffold00050 177743 1 A T scaffold3978 ScafM SNP 0015.scaffold00050 177760 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 177770 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 177777 1 G T scaffold3978 ScafM INDEL 0015.scaffold00050 177782 5 ..... TTGCA scaffold3978 ScafM SNP 0015.scaffold00050 177797 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 177808 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 177810 1 T G scaffold3978 ScafM INDEL 0015.scaffold00050 178072 3 ATT ... scaffold3978 Both SNP 0015.scaffold00050 178110 1 C T scaffold3978 Both INDEL 0015.scaffold00050 178129 1 . T scaffold3978 ScafM SNP 0015.scaffold00050 178231 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 178248 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 178259 1 G A scaffold3978 ScafM SNP 0015.scaffold00050 178265 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 178282 1 G T scaffold3978 ScafM SNP 0015.scaffold00050 178329 1 A C scaffold3978 ScafM SNP 0015.scaffold00050 178417 2 AA TG scaffold3978 ScafM INDEL 0015.scaffold00050 178614 2 AT .. scaffold3978 ScafM INDEL 0015.scaffold00050 178623 1 T . scaffold3978 ScafM SNP 0015.scaffold00050 178625 1 A G scaffold3978 Both SNP 0015.scaffold00050 178659 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 178738 2 GC AT scaffold3978 ReadM SNP 0015.scaffold00050 178897 1 T A - ReadM SNP 0015.scaffold00050 178940 1 C A - ReadM SNP 0015.scaffold00050 178970 1 C T - ScafM SNP 0015.scaffold00050 179002 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 179027 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 179048 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 179086 1 T C scaffold3978 ScafM SNP 0015.scaffold00050 179134 1 C G scaffold3978 ScafM SNP 0015.scaffold00050 179170 1 A G scaffold3978 ScafM SNP 0015.scaffold00050 179175 1 G T scaffold3978 ReadM SNP 0015.scaffold00050 180554 1 G A - ReadM SNP 0015.scaffold00050 180559 1 T C - ReadM SNP 0015.scaffold00050 180603 1 C A - ReadM SNP 0015.scaffold00050 180639 1 T A - ReadM SNP 0015.scaffold00050 180666 1 T C - ReadM SNP 0015.scaffold00050 180677 1 G C - ReadM SNP 0015.scaffold00050 182315 1 T G - ReadM SNP 0015.scaffold00050 182342 1 G A - ReadM SNP 0015.scaffold00050 182640 1 C T - ReadM SNP 0015.scaffold00050 182643 1 C T - ReadM SNP 0015.scaffold00050 182657 1 A G - ReadM SNP 0015.scaffold00050 182800 1 G A - ReadM SNP 0015.scaffold00050 183357 1 T C - ReadM SNP 0015.scaffold00050 183745 1 A C - ReadM SNP 0015.scaffold00050 184772 1 A G - ReadM SNP 0015.scaffold00050 184788 1 G T - ScafM SNP 0015.scaffold00050 188421 2 CT TG scaffold8412 ScafM SNP 0015.scaffold00050 188442 1 A G scaffold8412 ScafM INDEL 0015.scaffold00050 227191 4 .... AATT scaffold2110 ScafM SNP 0015.scaffold00050 227224 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 227356 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 227522 2 AT GC scaffold2110 Both SNP 0015.scaffold00050 227551 1 C T scaffold2110 Both SNP 0015.scaffold00050 227830 1 C T scaffold2110 Both SNP 0015.scaffold00050 227843 1 C G scaffold2110 Both SNP 0015.scaffold00050 228069 1 G A scaffold2110 Both SNP 0015.scaffold00050 228111 1 T G scaffold2110 Both SNP 0015.scaffold00050 228172 1 A G scaffold2110 Both SNP 0015.scaffold00050 228191 1 C A scaffold2110 ScafM INDEL 0015.scaffold00050 228338 4 GCAT .... scaffold2110 ScafM INDEL 0015.scaffold00050 228382 2 AT .. scaffold2110 ScafM INDEL 0015.scaffold00050 228416 4 .... TATA scaffold2110 ScafM SNP 0015.scaffold00050 228426 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 228445 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 228476 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 228479 1 A T scaffold2110 Both SNP 0015.scaffold00050 228528 1 T C scaffold2110 Both INDEL 0015.scaffold00050 228533 1 . A scaffold2110 Both SNP 0015.scaffold00050 228546 1 A G scaffold2110 ReadM SNP 0015.scaffold00050 228614 1 A G - ReadM SNP 0015.scaffold00050 228926 1 A G - ReadM SNP 0015.scaffold00050 228999 1 T C - ReadM SNP 0015.scaffold00050 229037 1 A G - ReadM SNP 0015.scaffold00050 229044 1 A C - ReadM SNP 0015.scaffold00050 229366 1 C T - Both SNP 0015.scaffold00050 229445 1 A G scaffold2110 Both SNP 0015.scaffold00050 229460 1 A G scaffold2110 ScafM INDEL 0015.scaffold00050 229541 11 AGTGTTTTAAC ........... scaffold2110 ScafM SNP 0015.scaffold00050 229608 1 A C scaffold2110 ScafM SNP 0015.scaffold00050 229611 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 229617 1 T C scaffold2110 Both SNP 0015.scaffold00050 229653 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 229764 1 T . scaffold2110 ScafM INDEL 0015.scaffold00050 229780 3 ... AAT scaffold2110 ScafM SNP 0015.scaffold00050 229784 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 229788 2 AT TA scaffold2110 ScafM SNP 0015.scaffold00050 229810 1 C T scaffold2110 ScafM INDEL 0015.scaffold00050 229821 1 . G scaffold2110 ScafM SNP 0015.scaffold00050 229843 1 A C scaffold2110 ScafM SNP 0015.scaffold00050 229847 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 229923 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 229931 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 229968 1 C T scaffold2110 Both SNP 0015.scaffold00050 229980 1 T C scaffold2110 Both SNP 0015.scaffold00050 229991 1 G A scaffold2110 Both SNP 0015.scaffold00050 230041 1 C A scaffold2110 Both SNP 0015.scaffold00050 230086 2 AA GT scaffold2110 Both SNP 0015.scaffold00050 230187 1 G A scaffold2110 Both SNP 0015.scaffold00050 230208 1 A C scaffold2110 ReadM SNP 0015.scaffold00050 230388 2 CC TT - ReadM SNP 0015.scaffold00050 230406 1 T A - ReadM SNP 0015.scaffold00050 230443 1 A G - ReadM SNP 0015.scaffold00050 230547 1 A G - ReadM SNP 0015.scaffold00050 230634 1 A G - ReadM SNP 0015.scaffold00050 230658 1 T C - ReadM SNP 0015.scaffold00050 230781 1 T C - ReadM SNP 0015.scaffold00050 230982 1 T C - ReadM SNP 0015.scaffold00050 231000 1 T C - ReadM INDEL 0015.scaffold00050 231036 1 . C - Both SNP 0015.scaffold00050 231360 1 T A scaffold2110 Both SNP 0015.scaffold00050 231397 1 C T scaffold2110 Both SNP 0015.scaffold00050 231505 1 A G scaffold2110 ScafM INDEL 0015.scaffold00050 231541 1 T . scaffold2110 ScafM SNP 0015.scaffold00050 231575 1 C A scaffold2110 ScafM INDEL 0015.scaffold00050 231577 1 G . scaffold2110 ScafM SNP 0015.scaffold00050 231582 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 231590 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 231598 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 231614 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 231616 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 231623 1 C T scaffold2110 ScafM INDEL 0015.scaffold00050 231634 21 ..................... CCTTTTTCATTTCTTCCTAGC scaffold2110 ScafM SNP 0015.scaffold00050 231683 1 G C scaffold2110 Both INDEL 0015.scaffold00050 231784 2 TA .. scaffold2110 Both SNP 0015.scaffold00050 231916 1 A C scaffold2110 Both SNP 0015.scaffold00050 231927 1 T A scaffold2110 Both SNP 0015.scaffold00050 232046 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 232084 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 232107 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 232175 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 232341 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 232368 1 A T scaffold2110 ScafM INDEL 0015.scaffold00050 232402 4 .... AATT scaffold2110 ScafM SNP 0015.scaffold00050 233134 1 G A scaffold2110 ScafM INDEL 0015.scaffold00050 233244 3 CCC ... scaffold2110 ScafM SNP 0015.scaffold00050 233248 1 C G scaffold2110 ScafM INDEL 0015.scaffold00050 233537 3 AAT ... scaffold2110 ScafM INDEL 0015.scaffold00050 233544 5 CGATA ..... scaffold2110 ScafM INDEL 0015.scaffold00050 233550 1 C . scaffold2110 ScafM SNP 0015.scaffold00050 233559 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 233581 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 233585 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 233601 1 G T scaffold2110 ScafM INDEL 0015.scaffold00050 233624 1 . T scaffold2110 ScafM INDEL 0015.scaffold00050 233625 1 . T scaffold2110 ScafM SNP 0015.scaffold00050 233627 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 233635 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 233643 1 C G scaffold2110 ScafM INDEL 0015.scaffold00050 233677 4 ATTA .... scaffold2110 ScafM INDEL 0015.scaffold00050 233683 1 C . scaffold2110 ScafM SNP 0015.scaffold00050 233686 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 233697 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 233725 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 234067 2 .. AT scaffold2110 ScafM SNP 0015.scaffold00050 234068 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 234107 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 234143 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 234153 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 234158 1 G A scaffold2110 ScafM INDEL 0015.scaffold00050 234173 2 .. AC scaffold2110 ScafM SNP 0015.scaffold00050 234175 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 234190 1 G T scaffold2110 ScafM INDEL 0015.scaffold00050 234205 2 TA .. scaffold2110 ScafM SNP 0015.scaffold00050 234228 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 234232 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 234237 2 AA GT scaffold2110 ScafM SNP 0015.scaffold00050 234244 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 234259 1 C A scaffold2110 ScafM INDEL 0015.scaffold00050 234281 5 ..... ATATT scaffold2110 ScafM SNP 0015.scaffold00050 234286 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 234293 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 234336 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 234358 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 234370 2 GA TG scaffold2110 ScafM SNP 0015.scaffold00050 234380 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 234443 2 GA TC scaffold2110 ScafM SNP 0015.scaffold00050 234446 1 A C scaffold2110 ScafM SNP 0015.scaffold00050 234481 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 234494 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 234508 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 234525 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 234636 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 234648 2 TT CA scaffold2110 ScafM INDEL 0015.scaffold00050 234694 1 T . scaffold2110 ScafM INDEL 0015.scaffold00050 234696 3 GAG ... scaffold2110 ScafM SNP 0015.scaffold00050 234848 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 234850 4 AATC .... scaffold2110 ScafM SNP 0015.scaffold00050 234861 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 234873 1 A T scaffold2110 ScafM INDEL 0015.scaffold00050 234883 3 TCC ... scaffold2110 ScafM INDEL 0015.scaffold00050 234887 3 TGG ... scaffold2110 Both SNP 0015.scaffold00050 234930 1 C G scaffold2110 Both SNP 0015.scaffold00050 234968 1 A G scaffold2110 Both SNP 0015.scaffold00050 234981 1 C T scaffold2110 Both SNP 0015.scaffold00050 235124 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 235153 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 235371 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 235380 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 235391 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 235395 1 A T scaffold2110 ScafM INDEL 0015.scaffold00050 235421 5 ACTCA ..... scaffold2110 ScafM SNP 0015.scaffold00050 235434 1 G C scaffold2110 ScafM SNP 0015.scaffold00050 235563 1 C A scaffold2110 ScafM INDEL 0015.scaffold00050 235595 4 .... ATGC scaffold2110 ReadM INDEL 0015.scaffold00050 235918 1 G . - ScafM SNP 0015.scaffold00050 235918 1 G T scaffold2110 Both SNP 0015.scaffold00050 236017 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 236043 1 C T scaffold2110 ScafM INDEL 0015.scaffold00050 236108 5 ..... GATAT scaffold2110 ScafM INDEL 0015.scaffold00050 236130 1 . A scaffold2110 ScafM INDEL 0015.scaffold00050 236299 3 ... TAT scaffold2110 ScafM SNP 0015.scaffold00050 236331 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 236357 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 236381 10 .......... AGATATATTG scaffold2110 ScafM INDEL 0015.scaffold00050 236382 1 . G scaffold2110 Both SNP 0015.scaffold00050 236607 1 T C scaffold2110 Both SNP 0015.scaffold00050 236668 1 T A scaffold2110 Both SNP 0015.scaffold00050 236761 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 236933 1 G A scaffold2110 ScafM INDEL 0015.scaffold00050 236938 4 GAGC .... scaffold2110 Both SNP 0015.scaffold00050 237095 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 237101 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 237108 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 237141 1 C A scaffold2110 ScafM INDEL 0015.scaffold00050 237195 9 AAAAAAAAA ......... scaffold2110 ScafM INDEL 0015.scaffold00050 237207 1 G . scaffold2110 ScafM INDEL 0015.scaffold00050 237217 1 A . scaffold2110 ScafM SNP 0015.scaffold00050 237225 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 237248 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 237251 1 T A scaffold2110 ScafM INDEL 0015.scaffold00050 237252 1 . T scaffold2110 ScafM SNP 0015.scaffold00050 237268 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 237272 1 T A scaffold2110 ScafM INDEL 0015.scaffold00050 237493 3 ... TTT scaffold2110 ScafM SNP 0015.scaffold00050 237947 1 T C scaffold2110 ReadM SNP 0015.scaffold00050 238301 1 C T - ReadM SNP 0015.scaffold00050 238368 1 C G - ReadM SNP 0015.scaffold00050 238624 1 T C - ReadM SNP 0015.scaffold00050 238649 1 A C - ReadM SNP 0015.scaffold00050 238728 1 T C - ReadM SNP 0015.scaffold00050 238750 1 C G - ReadM SNP 0015.scaffold00050 238804 1 A C - ReadM SNP 0015.scaffold00050 238896 1 T A - ReadM SNP 0015.scaffold00050 239008 1 C T - ReadM SNP 0015.scaffold00050 239021 1 C T - ReadM SNP 0015.scaffold00050 239093 1 C T - ReadM INDEL 0015.scaffold00050 239208 1 . T - ReadM SNP 0015.scaffold00050 239312 1 A T - ReadM SNP 0015.scaffold00050 239320 1 A G - ReadM SNP 0015.scaffold00050 239325 1 A G - ReadM SNP 0015.scaffold00050 239400 1 T C - ReadM SNP 0015.scaffold00050 239508 1 C T - ReadM SNP 0015.scaffold00050 239510 1 G A - ReadM SNP 0015.scaffold00050 239584 1 G A - ScafM SNP 0015.scaffold00050 241784 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 241789 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 241796 2 CC TT scaffold2110 ScafM SNP 0015.scaffold00050 241892 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 241909 2 TT CA scaffold2110 ScafM SNP 0015.scaffold00050 241933 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 241954 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 241956 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 242043 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 242064 1 A C scaffold2110 ScafM SNP 0015.scaffold00050 242080 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 242083 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 242104 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 242133 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 242199 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 242213 1 G C scaffold2110 ScafM SNP 0015.scaffold00050 242244 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 242251 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 242261 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 242273 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 242282 1 A C scaffold2110 ReadM SNP 0015.scaffold00050 242852 1 G A - ReadM INDEL 0015.scaffold00050 244497 1 T . - ReadM SNP 0015.scaffold00050 244516 1 A G - ReadM SNP 0015.scaffold00050 244534 1 G A - ReadM SNP 0015.scaffold00050 244628 1 G A - ReadM SNP 0015.scaffold00050 244678 1 A C - ReadM SNP 0015.scaffold00050 244721 1 T G - ReadM SNP 0015.scaffold00050 244753 1 C T - ReadM SNP 0015.scaffold00050 244770 1 C T - ReadM SNP 0015.scaffold00050 244798 1 G A - ReadM SNP 0015.scaffold00050 244915 1 T C - ReadM SNP 0015.scaffold00050 244939 1 T A - ReadM SNP 0015.scaffold00050 244943 1 T C - ReadM SNP 0015.scaffold00050 245082 1 A G - ReadM SNP 0015.scaffold00050 245178 1 T G - ReadM SNP 0015.scaffold00050 245180 1 C T - ReadM SNP 0015.scaffold00050 245244 1 G A - ReadM SNP 0015.scaffold00050 245264 1 C A - ReadM SNP 0015.scaffold00050 245327 1 A C - ReadM SNP 0015.scaffold00050 245332 1 G A - ReadM SNP 0015.scaffold00050 245398 1 G A - ReadM SNP 0015.scaffold00050 245421 1 C T - ReadM SNP 0015.scaffold00050 245464 1 C T - ReadM SNP 0015.scaffold00050 245562 1 A G - ReadM SNP 0015.scaffold00050 245590 1 A G - ReadM SNP 0015.scaffold00050 245675 1 A T - ReadM SNP 0015.scaffold00050 245736 1 C A - ReadM SNP 0015.scaffold00050 245801 1 T C - ReadM SNP 0015.scaffold00050 245827 1 A C - ReadM SNP 0015.scaffold00050 245846 1 C A - ScafM SNP 0015.scaffold00050 246231 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 246233 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 246253 2 TT AC scaffold2110 Both SNP 0015.scaffold00050 246323 1 A G scaffold2110 Both SNP 0015.scaffold00050 246338 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 246407 3 ... TTT scaffold2110 ScafM SNP 0015.scaffold00050 246408 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 246422 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 246429 1 C T scaffold2110 ScafM INDEL 0015.scaffold00050 246434 4 TTTT .... scaffold2110 ScafM SNP 0015.scaffold00050 246445 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 246545 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 246714 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 246728 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 246752 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 246756 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 246783 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 246807 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 246813 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 246817 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 246826 3 GCC ATT scaffold2110 ScafM SNP 0015.scaffold00050 246871 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 246878 1 T A scaffold2110 Both SNP 0015.scaffold00050 246904 1 G A scaffold2110 Both SNP 0015.scaffold00050 246930 1 T C scaffold2110 ReadM SNP 0015.scaffold00050 247050 1 G T - ReadM SNP 0015.scaffold00050 247060 1 C A - ReadM SNP 0015.scaffold00050 247166 1 G C - ReadM SNP 0015.scaffold00050 247188 1 T C - ReadM SNP 0015.scaffold00050 247202 1 G T - ReadM SNP 0015.scaffold00050 247358 1 C T - ReadM SNP 0015.scaffold00050 247395 1 C T - ReadM SNP 0015.scaffold00050 247421 1 T A - ReadM SNP 0015.scaffold00050 247460 1 G A - ReadM SNP 0015.scaffold00050 247468 1 T A - ReadM SNP 0015.scaffold00050 247551 1 G C - ScafM SNP 0015.scaffold00050 247856 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 247867 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 247877 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 247944 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 248053 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 248090 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 248128 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 248181 2 TT AA scaffold2110 ScafM SNP 0015.scaffold00050 248185 1 G C scaffold2110 ScafM INDEL 0015.scaffold00050 248746 1 . G scaffold3148 ScafM SNP 0015.scaffold00050 248752 1 A T scaffold3148 ScafM SNP 0015.scaffold00050 248762 1 G T scaffold3148 ScafM INDEL 0015.scaffold00050 248771 3 ... TAT scaffold3148 ScafM INDEL 0015.scaffold00050 248773 1 . T scaffold3148 ScafM SNP 0015.scaffold00050 248786 1 C A scaffold3148 ScafM SNP 0015.scaffold00050 248790 1 A G scaffold3148 ScafM SNP 0015.scaffold00050 248799 1 T C scaffold3148 ScafM SNP 0015.scaffold00050 248805 1 C A scaffold3148 ScafM SNP 0015.scaffold00050 248813 1 C T scaffold3148 ScafM SNP 0015.scaffold00050 248850 1 T C scaffold3148 ScafM SNP 0015.scaffold00050 248856 1 A T scaffold3148 ScafM SNP 0015.scaffold00050 248860 1 C A scaffold3148 ScafM INDEL 0015.scaffold00050 248873 1 T . scaffold3148 ScafM SNP 0015.scaffold00050 248876 1 C A scaffold3148 ScafM INDEL 0015.scaffold00050 248899 9 TATATATTT ......... scaffold3148 ScafM SNP 0015.scaffold00050 248917 1 A G scaffold3148 ScafM INDEL 0015.scaffold00050 248943 1 G . scaffold3148 ScafM SNP 0015.scaffold00050 248946 2 AA GT scaffold3148 ScafM SNP 0015.scaffold00050 248982 1 T C scaffold3148 ScafM INDEL 0015.scaffold00050 249004 1 . A scaffold3148 ScafM SNP 0015.scaffold00050 249012 1 T A scaffold3148 ScafM SNP 0015.scaffold00050 249018 1 G C scaffold3148 ScafM SNP 0015.scaffold00050 249094 2 GT AA scaffold3148 ScafM SNP 0015.scaffold00050 253230 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 253255 1 C T scaffold2110 Both SNP 0015.scaffold00050 253274 1 C T scaffold2110 Both SNP 0015.scaffold00050 253281 1 G A scaffold2110 Both SNP 0015.scaffold00050 253355 1 T C scaffold2110 Both SNP 0015.scaffold00050 253367 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 253432 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 253460 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 253471 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 253541 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 253627 1 G C scaffold2110 ScafM SNP 0015.scaffold00050 253661 1 A C scaffold2110 ScafM INDEL 0015.scaffold00050 253688 1 . G scaffold2110 ScafM SNP 0015.scaffold00050 253705 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 253723 1 T A scaffold2110 ScafM INDEL 0015.scaffold00050 253732 2 TG .. scaffold2110 ScafM SNP 0015.scaffold00050 253745 1 G C scaffold2110 ScafM SNP 0015.scaffold00050 253764 1 A C scaffold2110 ScafM INDEL 0015.scaffold00050 253767 1 G . scaffold2110 ScafM SNP 0015.scaffold00050 253771 1 A G scaffold2110 ReadM SNP 0015.scaffold00050 254994 1 T C - ReadM SNP 0015.scaffold00050 254999 1 T C - ReadM SNP 0015.scaffold00050 255104 1 A G - Both SNP 0015.scaffold00050 255234 1 C T scaffold2110 Both SNP 0015.scaffold00050 255253 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 255334 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 255345 2 GT AA scaffold2110 Both SNP 0015.scaffold00050 255368 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 255493 1 C T scaffold2110 ScafM INDEL 0015.scaffold00050 255506 1 . T scaffold2110 ScafM INDEL 0015.scaffold00050 255508 2 .. CT scaffold2110 Both SNP 0015.scaffold00050 255613 1 C T scaffold2110 Both SNP 0015.scaffold00050 255635 1 A C scaffold2110 Both SNP 0015.scaffold00050 255646 1 T C scaffold2110 Both SNP 0015.scaffold00050 255660 1 C T scaffold2110 Both SNP 0015.scaffold00050 255675 1 G A scaffold2110 Both SNP 0015.scaffold00050 255771 1 C T scaffold2110 Both SNP 0015.scaffold00050 255914 1 G A scaffold2110 Both INDEL 0015.scaffold00050 255922 1 A . scaffold2110 Both SNP 0015.scaffold00050 255945 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 256027 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 256042 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 256044 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 256078 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 256080 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 256086 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 256120 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 256154 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 256158 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 256185 2 CA TG scaffold2110 ScafM SNP 0015.scaffold00050 256217 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 256258 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 256264 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 256272 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 256300 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 256330 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 256352 1 C G scaffold2110 ScafM SNP 0015.scaffold00050 257597 1 G A scaffold7364 ScafM SNP 0015.scaffold00050 257651 1 C T scaffold7364 ScafM SNP 0015.scaffold00050 263376 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 263419 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 263445 1 A T scaffold2110 ScafM INDEL 0015.scaffold00050 263489 8 CACTTGTG ........ scaffold2110 ScafM SNP 0015.scaffold00050 263519 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 263599 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 263728 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 264005 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 264038 1 A T scaffold2110 ReadM SNP 0015.scaffold00050 264940 1 C G - ReadM SNP 0015.scaffold00050 264964 1 G A - ReadM SNP 0015.scaffold00050 265056 1 C G - ReadM SNP 0015.scaffold00050 265112 1 A C - ReadM SNP 0015.scaffold00050 265140 1 A T - ReadM SNP 0015.scaffold00050 265242 1 A G - ReadM SNP 0015.scaffold00050 265463 1 G T - ReadM SNP 0015.scaffold00050 265478 1 G T - ReadM SNP 0015.scaffold00050 265539 1 T A - ReadM SNP 0015.scaffold00050 265574 1 G A - ReadM SNP 0015.scaffold00050 265639 1 G T - ReadM SNP 0015.scaffold00050 265803 1 A T - ReadM SNP 0015.scaffold00050 265877 1 A G - ReadM SNP 0015.scaffold00050 265889 1 G C - ReadM SNP 0015.scaffold00050 265976 1 G A - ReadM SNP 0015.scaffold00050 265987 1 C T - ReadM SNP 0015.scaffold00050 266010 1 A G - ReadM SNP 0015.scaffold00050 266087 1 A T - ReadM SNP 0015.scaffold00050 266118 1 G T - ReadM SNP 0015.scaffold00050 266129 1 A T - ReadM SNP 0015.scaffold00050 266175 1 T G - ReadM SNP 0015.scaffold00050 266225 1 C A - ReadM SNP 0015.scaffold00050 266317 1 G A - ReadM SNP 0015.scaffold00050 266346 1 C T - ReadM SNP 0015.scaffold00050 266424 1 A G - ReadM SNP 0015.scaffold00050 266545 1 A G - ReadM SNP 0015.scaffold00050 266563 1 A G - ReadM SNP 0015.scaffold00050 266601 1 A G - ReadM SNP 0015.scaffold00050 266653 1 G A - ReadM SNP 0015.scaffold00050 266674 1 T C - ReadM SNP 0015.scaffold00050 266815 1 A T - ReadM SNP 0015.scaffold00050 266994 1 C G - ReadM SNP 0015.scaffold00050 267033 1 A G - ReadM SNP 0015.scaffold00050 267104 1 G C - ReadM SNP 0015.scaffold00050 267118 1 A G - ReadM SNP 0015.scaffold00050 267206 1 A C - ReadM SNP 0015.scaffold00050 267231 1 A G - ReadM SNP 0015.scaffold00050 267325 1 G A - ReadM SNP 0015.scaffold00050 267338 1 C T - ReadM SNP 0015.scaffold00050 267356 1 A G - ReadM SNP 0015.scaffold00050 267449 1 C T - ReadM SNP 0015.scaffold00050 267480 1 T C - ReadM SNP 0015.scaffold00050 267558 1 C A - ReadM SNP 0015.scaffold00050 267586 1 A G - ReadM SNP 0015.scaffold00050 267596 1 T G - ReadM SNP 0015.scaffold00050 267637 1 T C - ReadM SNP 0015.scaffold00050 267797 1 G A - ReadM SNP 0015.scaffold00050 267941 1 A C - ReadM SNP 0015.scaffold00050 267974 1 G T - ScafM SNP 0015.scaffold00050 268057 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268062 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 268066 1 T G scaffold2110 ScafM SNP 0015.scaffold00050 268088 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 268121 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268147 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268174 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268190 1 G C scaffold2110 ScafM SNP 0015.scaffold00050 268217 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 268225 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 268230 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268246 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268251 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 268259 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 268263 2 GT AC scaffold2110 ScafM SNP 0015.scaffold00050 268275 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 268277 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 268280 1 T C scaffold2110 ScafM INDEL 0015.scaffold00050 268303 1 C . scaffold2110 ScafM SNP 0015.scaffold00050 268318 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 268323 1 T C scaffold2110 Both SNP 0015.scaffold00050 268382 1 G C scaffold2110 Both SNP 0015.scaffold00050 268395 1 T C scaffold2110 Both SNP 0015.scaffold00050 268413 1 A T scaffold2110 Both INDEL 0015.scaffold00050 268473 1 C . scaffold2110 Both SNP 0015.scaffold00050 268635 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 268659 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 268666 1 A G scaffold2110 ScafM SNP 0015.scaffold00050 268692 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 268706 1 T A scaffold2110 ScafM SNP 0015.scaffold00050 268725 1 G T scaffold2110 ScafM SNP 0015.scaffold00050 268735 1 G A scaffold2110 Both SNP 0015.scaffold00050 268754 1 A T scaffold2110 Both SNP 0015.scaffold00050 268792 1 T G scaffold2110 Both SNP 0015.scaffold00050 268806 1 C T scaffold2110 ReadM SNP 0015.scaffold00050 268852 1 G A - ReadM SNP 0015.scaffold00050 268964 2 GC AA - ReadM SNP 0015.scaffold00050 269316 1 A T - ReadM INDEL 0015.scaffold00050 269355 1 C . - ReadM SNP 0015.scaffold00050 269376 1 C A - ReadM SNP 0015.scaffold00050 269396 1 G C - ReadM SNP 0015.scaffold00050 269454 1 G A - ReadM SNP 0015.scaffold00050 269466 1 T A - ReadM SNP 0015.scaffold00050 269728 1 G A - ReadM SNP 0015.scaffold00050 269803 1 G A - ReadM SNP 0015.scaffold00050 269818 1 C T - ReadM SNP 0015.scaffold00050 269854 1 G A - ReadM SNP 0015.scaffold00050 269893 1 G A - ReadM SNP 0015.scaffold00050 269896 1 T G - ReadM INDEL 0015.scaffold00050 269920 1 G . - ReadM SNP 0015.scaffold00050 269971 1 T A - ReadM SNP 0015.scaffold00050 270013 1 C T - ReadM SNP 0015.scaffold00050 270222 1 T C - ReadM SNP 0015.scaffold00050 270247 1 T G - Both SNP 0015.scaffold00050 270315 1 C T scaffold2110 Both SNP 0015.scaffold00050 270321 1 T C scaffold2110 ScafM SNP 0015.scaffold00050 270340 1 G A scaffold2110 ScafM SNP 0015.scaffold00050 270359 1 C A scaffold2110 ScafM SNP 0015.scaffold00050 270362 1 C T scaffold2110 ScafM SNP 0015.scaffold00050 270398 1 A T scaffold2110 ScafM SNP 0015.scaffold00050 270401 1 C T scaffold2110 ReadM SNP 0015.scaffold00050 270437 1 C A - ReadM SNP 0015.scaffold00050 270470 1 T A - ReadM SNP 0015.scaffold00050 270480 1 T G - ReadM SNP 0015.scaffold00050 271291 1 A G - ReadM SNP 0015.scaffold00050 271316 1 T A - ReadM SNP 0015.scaffold00050 271444 1 T C - ReadM SNP 0015.scaffold00050 271453 1 A T - ReadM SNP 0015.scaffold00050 271679 1 C T - ScafM INDEL 0015.scaffold00050 272048 5 AGAAT ..... scaffold21763 ScafM SNP 0015.scaffold00050 272099 1 A C scaffold21763 ScafM SNP 0015.scaffold00050 272167 1 A G scaffold21763 ScafM SNP 0015.scaffold00050 272183 1 T C scaffold21763 ScafM SNP 0015.scaffold00050 272193 1 C T scaffold21763 ScafM SNP 0015.scaffold00050 277680 1 G A scaffold813 ScafM SNP 0015.scaffold00050 277691 2 GC AG scaffold813 ScafM SNP 0015.scaffold00050 277731 1 A G scaffold813 ScafM SNP 0015.scaffold00050 277740 1 C T scaffold813 ScafM SNP 0015.scaffold00050 277744 1 T C scaffold813 ScafM SNP 0015.scaffold00050 277767 2 AC CA scaffold813 ScafM SNP 0015.scaffold00050 277776 1 T C scaffold813 ScafM SNP 0015.scaffold00050 277811 1 T C scaffold813 ScafM SNP 0015.scaffold00050 277820 1 G A scaffold813 ScafM SNP 0015.scaffold00050 277826 1 G A scaffold813 ScafM SNP 0015.scaffold00050 277838 1 C T scaffold813 ScafM SNP 0015.scaffold00050 277872 1 A T scaffold813 ScafM SNP 0015.scaffold00050 277898 1 C T scaffold813 ScafM SNP 0015.scaffold00050 277900 1 G C scaffold813 ScafM SNP 0015.scaffold00050 277907 1 C T scaffold813 ScafM SNP 0015.scaffold00050 277957 1 C A scaffold813 ScafM SNP 0015.scaffold00050 277970 1 C T scaffold813 ScafM SNP 0015.scaffold00050 277982 2 AG TT scaffold813 ScafM SNP 0015.scaffold00050 278003 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278005 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278022 1 C T scaffold813 ScafM INDEL 0015.scaffold00050 278069 3 ... AAA scaffold813 ScafM SNP 0015.scaffold00050 278081 1 G C scaffold813 ScafM INDEL 0015.scaffold00050 278092 1 C . scaffold813 ScafM INDEL 0015.scaffold00050 278098 1 . G scaffold813 ScafM INDEL 0015.scaffold00050 278099 1 . C scaffold813 ScafM SNP 0015.scaffold00050 278102 2 AT GA scaffold813 ScafM SNP 0015.scaffold00050 278141 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278166 1 G A scaffold813 ScafM SNP 0015.scaffold00050 278209 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278218 2 GA CC scaffold813 ScafM SNP 0015.scaffold00050 278241 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278265 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278286 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278295 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278310 2 TA CG scaffold813 ScafM SNP 0015.scaffold00050 278320 1 G T scaffold813 ScafM SNP 0015.scaffold00050 278352 1 G A scaffold813 ScafM SNP 0015.scaffold00050 278366 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278372 2 AG GA scaffold813 ScafM SNP 0015.scaffold00050 278384 1 G C scaffold813 ScafM SNP 0015.scaffold00050 278420 1 G A scaffold813 ScafM SNP 0015.scaffold00050 278424 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278440 1 A T scaffold813 ScafM SNP 0015.scaffold00050 278452 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278468 1 T C scaffold813 ScafM SNP 0015.scaffold00050 278470 1 G T scaffold813 ScafM SNP 0015.scaffold00050 278482 1 G A scaffold813 ScafM SNP 0015.scaffold00050 278509 1 G T scaffold813 ScafM SNP 0015.scaffold00050 278511 1 A G scaffold813 ScafM SNP 0015.scaffold00050 278519 1 T G scaffold813 ScafM SNP 0015.scaffold00050 278760 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 278768 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 278771 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 278781 1 G T scaffold1863 ReadM INDEL 0015.scaffold00050 279191 1 . C - ReadM SNP 0015.scaffold00050 279329 1 T C - ReadM SNP 0015.scaffold00050 279342 1 G A - ReadM SNP 0015.scaffold00050 279423 1 A C - Both SNP 0015.scaffold00050 279593 1 T C scaffold1863 Both SNP 0015.scaffold00050 279632 1 A G scaffold1863 Both SNP 0015.scaffold00050 279673 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 279722 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 279730 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 279734 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 279757 2 GT AG scaffold1863 Both SNP 0015.scaffold00050 279807 1 G A scaffold1863 Both SNP 0015.scaffold00050 279860 1 T C scaffold1863 Both SNP 0015.scaffold00050 279870 1 A C scaffold1863 Both SNP 0015.scaffold00050 279877 1 A C scaffold1863 ReadM SNP 0015.scaffold00050 279965 1 A C - Both SNP 0015.scaffold00050 280014 1 C T scaffold1863 Both SNP 0015.scaffold00050 280031 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 280066 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 280068 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 280116 2 AA GG scaffold1863 Both SNP 0015.scaffold00050 280131 1 G T scaffold1863 ScafM INDEL 0015.scaffold00050 280200 1 . C scaffold1863 ScafM SNP 0015.scaffold00050 280204 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 280208 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 280212 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 280221 1 C T scaffold1863 Both SNP 0015.scaffold00050 280279 1 T C scaffold1863 Both SNP 0015.scaffold00050 280307 1 T C scaffold1863 Both SNP 0015.scaffold00050 280378 1 C T scaffold1863 Both SNP 0015.scaffold00050 280390 1 A G scaffold1863 ScafM INDEL 0015.scaffold00050 280400 1 A . scaffold1863 ScafM SNP 0015.scaffold00050 280429 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 280442 1 G A scaffold1863 Both SNP 0015.scaffold00050 280444 1 T C scaffold1863 Both SNP 0015.scaffold00050 280482 1 T A scaffold1863 Both SNP 0015.scaffold00050 280529 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 280605 2 GG TA scaffold1863 Both SNP 0015.scaffold00050 280651 1 G A scaffold1863 Both SNP 0015.scaffold00050 280677 1 A C scaffold1863 Both SNP 0015.scaffold00050 280764 1 A T scaffold1863 Both SNP 0015.scaffold00050 280780 1 A C scaffold1863 Both SNP 0015.scaffold00050 280850 1 C T scaffold1863 ScafM INDEL 0015.scaffold00050 280885 3 ... ATG scaffold1863 ScafM SNP 0015.scaffold00050 280889 1 A G scaffold1863 Both SNP 0015.scaffold00050 280938 1 A C scaffold1863 Both SNP 0015.scaffold00050 281062 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 281073 2 AA GG scaffold1863 ScafM SNP 0015.scaffold00050 281090 3 TAC GTT scaffold1863 ScafM SNP 0015.scaffold00050 281097 2 CA AC scaffold1863 Both SNP 0015.scaffold00050 281157 1 C A scaffold1863 Both SNP 0015.scaffold00050 281184 1 C T scaffold1863 Both SNP 0015.scaffold00050 281290 1 C T scaffold1863 Both SNP 0015.scaffold00050 281308 1 G A scaffold1863 Both SNP 0015.scaffold00050 281438 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 281549 1 A G scaffold1863 ScafM INDEL 0015.scaffold00050 281564 1 G . scaffold1863 ScafM INDEL 0015.scaffold00050 281566 1 G . scaffold1863 ReadM SNP 0015.scaffold00050 281659 1 T A - ReadM SNP 0015.scaffold00050 281672 1 A T - ReadM SNP 0015.scaffold00050 281694 1 T A - Both SNP 0015.scaffold00050 281721 1 A T scaffold1863 Both SNP 0015.scaffold00050 281757 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 281800 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 281819 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 281821 2 GT AG scaffold1863 ScafM SNP 0015.scaffold00050 281835 1 A G scaffold1863 Both SNP 0015.scaffold00050 281871 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 281975 2 GC AT scaffold1863 ScafM SNP 0015.scaffold00050 282032 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 282043 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282067 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282073 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 282107 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282127 1 G A scaffold1863 Both SNP 0015.scaffold00050 282161 1 C G scaffold1863 Both SNP 0015.scaffold00050 282174 1 T A scaffold1863 Both SNP 0015.scaffold00050 282246 1 G A scaffold1863 Both SNP 0015.scaffold00050 282289 1 A C scaffold1863 Both INDEL 0015.scaffold00050 282301 1 A . scaffold1863 ScafM SNP 0015.scaffold00050 282318 1 G A scaffold1863 ReadM SNP 0015.scaffold00050 282344 1 C T - ReadM SNP 0015.scaffold00050 282383 1 G C - ReadM SNP 0015.scaffold00050 282432 1 A C - ReadM SNP 0015.scaffold00050 282453 1 C T - ReadM SNP 0015.scaffold00050 282677 1 T C - ReadM SNP 0015.scaffold00050 282689 1 T C - ReadM SNP 0015.scaffold00050 282740 1 C T - Both SNP 0015.scaffold00050 282787 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282827 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282835 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 282851 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 282855 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 282886 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 282915 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 282966 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 282972 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 282982 1 C G scaffold1863 ReadM SNP 0015.scaffold00050 283038 1 C T - ReadM SNP 0015.scaffold00050 283060 1 A G - ReadM SNP 0015.scaffold00050 283066 1 G T - ReadM SNP 0015.scaffold00050 283183 1 A T - ReadM INDEL 0015.scaffold00050 283321 1 . C - ReadM SNP 0015.scaffold00050 283357 1 T C - ReadM SNP 0015.scaffold00050 283372 1 A G - ReadM SNP 0015.scaffold00050 283586 1 A G - ReadM SNP 0015.scaffold00050 283596 1 A G - ReadM SNP 0015.scaffold00050 283686 1 A G - ScafM SNP 0015.scaffold00050 283993 2 AT GA scaffold1863 ScafM SNP 0015.scaffold00050 293558 1 A G scaffold20328 ScafM SNP 0015.scaffold00050 293565 1 T G scaffold20328 ScafM SNP 0015.scaffold00050 293569 1 A T scaffold20328 ScafM SNP 0015.scaffold00050 293596 1 C G scaffold20328 ScafM INDEL 0015.scaffold00050 293606 1 . G scaffold20328 ScafM SNP 0015.scaffold00050 302915 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 302928 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 302931 2 TA CT scaffold1863 ScafM SNP 0015.scaffold00050 302975 2 TT GC scaffold1863 ScafM INDEL 0015.scaffold00050 303001 1 . C scaffold1863 ScafM SNP 0015.scaffold00050 303025 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 303196 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 303207 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 303245 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 303272 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 303275 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 303310 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 303318 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 303327 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 303347 1 A T scaffold1863 ScafM INDEL 0015.scaffold00050 303354 10 .......... TGGACATGGG scaffold1863 ScafM INDEL 0015.scaffold00050 303356 1 . T scaffold1863 ScafM SNP 0015.scaffold00050 303363 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 303367 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 303377 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 303382 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 303398 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 303400 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 303412 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 303441 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 303453 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 303471 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 303473 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 303498 1 C A scaffold1863 ScafM INDEL 0015.scaffold00050 303503 1 . A scaffold1863 ScafM SNP 0015.scaffold00050 303510 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 303652 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 303889 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 303960 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 318683 2 TG CA scaffold1863 ScafM SNP 0015.scaffold00050 318696 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 318700 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 318836 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 318841 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 318849 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 318889 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 318893 1 C T scaffold1863 ReadM SNP 0015.scaffold00050 318939 1 G A - ReadM SNP 0015.scaffold00050 319022 1 C T - ScafM SNP 0015.scaffold00050 319474 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 319480 1 T C scaffold1863 Both SNP 0015.scaffold00050 319502 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 319518 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 319581 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 319583 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 319589 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 319619 1 C T scaffold1863 ScafM INDEL 0015.scaffold00050 319625 1 T . scaffold1863 ScafM SNP 0015.scaffold00050 319665 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 319672 1 A G scaffold1863 Both SNP 0015.scaffold00050 319704 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 319743 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 319771 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 319777 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 319792 2 GG TA scaffold1863 ScafM SNP 0015.scaffold00050 319798 1 T C scaffold1863 ReadM SNP 0015.scaffold00050 320350 1 G A - ReadM INDEL 0015.scaffold00050 320380 1 C . - ReadM SNP 0015.scaffold00050 320869 1 G A - ReadM SNP 0015.scaffold00050 320879 1 C G - ReadM SNP 0015.scaffold00050 320897 1 G A - ReadM SNP 0015.scaffold00050 321006 1 C T - ReadM SNP 0015.scaffold00050 321045 1 T G - ScafM SNP 0015.scaffold00050 321197 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 321200 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 321208 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 321220 1 C G scaffold1863 Both INDEL 0015.scaffold00050 321246 1 . T scaffold1863 ScafM SNP 0015.scaffold00050 321296 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 321342 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 321358 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 321379 1 T G scaffold1863 ScafM INDEL 0015.scaffold00050 321436 7 TTTTAGC ....... scaffold1863 ScafM SNP 0015.scaffold00050 321447 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 321449 1 A G scaffold1863 Both INDEL 0015.scaffold00050 321523 1 . A scaffold1863 Both SNP 0015.scaffold00050 321608 1 T G scaffold1863 Both SNP 0015.scaffold00050 321610 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 321650 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 321665 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 321667 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 321688 1 G T scaffold1863 ScafM INDEL 0015.scaffold00050 321697 3 TTC .AA scaffold1863 ScafM SNP 0015.scaffold00050 321736 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 321740 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 321780 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 321786 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 321808 2 TA CG scaffold1863 ScafM SNP 0015.scaffold00050 321831 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 321862 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 321865 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 321875 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 321887 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 321892 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 321941 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 321964 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 321978 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 321997 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 322011 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 322013 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 322035 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 322042 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 322051 2 GG AA scaffold1863 ScafM SNP 0015.scaffold00050 322078 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 322101 1 G T scaffold1863 Both SNP 0015.scaffold00050 322104 1 T C scaffold1863 ReadM INDEL 0015.scaffold00050 322119 1 T . - ReadM SNP 0015.scaffold00050 322282 1 G A - ReadM SNP 0015.scaffold00050 322371 1 A C - ReadM SNP 0015.scaffold00050 322379 1 A C - ScafM INDEL 0015.scaffold00050 322459 2 .G CA scaffold1863 ScafM SNP 0015.scaffold00050 322465 1 A T scaffold1863 Both SNP 0015.scaffold00050 322503 1 C G scaffold1863 Both SNP 0015.scaffold00050 322532 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 322585 2 CA TG scaffold1863 ScafM SNP 0015.scaffold00050 322588 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 322609 1 T C scaffold1863 ReadM SNP 0015.scaffold00050 322627 1 A G - ReadM SNP 0015.scaffold00050 322671 1 G A - ReadM SNP 0015.scaffold00050 322719 1 T C - ReadM SNP 0015.scaffold00050 322755 1 G A - ReadM SNP 0015.scaffold00050 322814 1 T A - ReadM SNP 0015.scaffold00050 322919 1 G A - ReadM SNP 0015.scaffold00050 323898 1 G C - ReadM SNP 0015.scaffold00050 323980 1 A G - ReadM SNP 0015.scaffold00050 323986 1 A T - ReadM SNP 0015.scaffold00050 324006 1 A G - ReadM SNP 0015.scaffold00050 324044 1 G T - ReadM SNP 0015.scaffold00050 324138 1 T A - ReadM SNP 0015.scaffold00050 324142 1 A T - ReadM SNP 0015.scaffold00050 324150 1 T C - ReadM SNP 0015.scaffold00050 324392 1 G A - ReadM SNP 0015.scaffold00050 324409 1 G A - ReadM SNP 0015.scaffold00050 324509 1 C T - ReadM SNP 0015.scaffold00050 324517 1 G A - ReadM SNP 0015.scaffold00050 324600 1 C T - ReadM SNP 0015.scaffold00050 324604 1 C T - ReadM SNP 0015.scaffold00050 324690 1 C T - ScafM SNP 0015.scaffold00050 324778 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 328757 1 G A scaffold2446 ReadM SNP 0015.scaffold00050 339377 1 A G - ReadM SNP 0015.scaffold00050 339445 1 C A - ReadM SNP 0015.scaffold00050 339451 1 T G - Both SNP 0015.scaffold00050 339547 1 C G scaffold1863 Both SNP 0015.scaffold00050 339559 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 339585 1 G C scaffold1863 Both SNP 0015.scaffold00050 339668 1 A G scaffold1863 ReadM SNP 0015.scaffold00050 339739 1 C A - ReadM SNP 0015.scaffold00050 339755 1 T C - ScafM SNP 0015.scaffold00050 339862 1 T G scaffold1863 Both SNP 0015.scaffold00050 339886 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 339910 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 339912 1 G A scaffold1863 Both SNP 0015.scaffold00050 339936 1 T A scaffold1863 Both SNP 0015.scaffold00050 339980 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 340043 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 340048 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 340059 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 340073 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 340115 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 340895 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 340905 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 340930 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 340933 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 340949 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 341001 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 341003 2 GT CC scaffold1863 ScafM SNP 0015.scaffold00050 341013 1 G C scaffold1863 Both SNP 0015.scaffold00050 341107 2 GT AC scaffold1863 ScafM SNP 0015.scaffold00050 341110 1 G C scaffold1863 Both SNP 0015.scaffold00050 341183 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 341218 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 341221 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 341225 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 341233 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 341235 1 A G scaffold1863 ReadM INDEL 0015.scaffold00050 341286 1 G . - ReadM SNP 0015.scaffold00050 341301 1 C A - ReadM SNP 0015.scaffold00050 341317 1 T A - ReadM SNP 0015.scaffold00050 341604 1 T C - ReadM SNP 0015.scaffold00050 341648 1 C T - ReadM SNP 0015.scaffold00050 341704 1 C T - ReadM SNP 0015.scaffold00050 341711 1 C T - ReadM INDEL 0015.scaffold00050 341733 1 . T - ReadM SNP 0015.scaffold00050 341829 1 C A - ReadM SNP 0015.scaffold00050 341838 1 T C - ReadM SNP 0015.scaffold00050 341879 1 A G - ScafM SNP 0015.scaffold00050 341926 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 341931 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 341937 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 341953 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 341957 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 341972 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 342003 1 C G scaffold1863 ScafM SNP 0015.scaffold00050 342005 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 342020 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 342024 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 342030 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 342041 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 342083 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 342094 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 342104 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 342110 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 342114 1 T C scaffold1863 Both SNP 0015.scaffold00050 342153 1 G A scaffold1863 Both SNP 0015.scaffold00050 342201 1 C T scaffold1863 Both SNP 0015.scaffold00050 342238 1 A G scaffold1863 ScafM INDEL 0015.scaffold00050 342279 2 .. CA scaffold1863 ScafM SNP 0015.scaffold00050 342284 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 342307 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 342315 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 342317 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 342338 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 342360 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 342362 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 342388 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 342408 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 342412 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 342423 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 342455 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 342469 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 342476 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 342482 1 A T scaffold1863 Both SNP 0015.scaffold00050 342503 1 T C scaffold1863 Both SNP 0015.scaffold00050 342507 1 G A scaffold1863 ReadM SNP 0015.scaffold00050 342644 1 T G - Both SNP 0015.scaffold00050 342719 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 342741 2 AT TA scaffold1863 Both SNP 0015.scaffold00050 342775 1 A G scaffold1863 Both SNP 0015.scaffold00050 342844 1 C A scaffold1863 ScafM SNP 0015.scaffold00050 342858 1 C T scaffold1863 Both SNP 0015.scaffold00050 342863 1 A G scaffold1863 Both SNP 0015.scaffold00050 342898 1 A T scaffold1863 ReadM SNP 0015.scaffold00050 342965 1 C G - ReadM SNP 0015.scaffold00050 343028 1 G T - ReadM SNP 0015.scaffold00050 343059 1 C A - ScafM INDEL 0015.scaffold00050 343075 1 A . scaffold1863 ScafM SNP 0015.scaffold00050 343082 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 343115 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 343122 1 T G scaffold1863 ScafM INDEL 0015.scaffold00050 343129 5 ..... ATGGC scaffold1863 Both SNP 0015.scaffold00050 343146 1 T A scaffold1863 Both SNP 0015.scaffold00050 343177 1 A C scaffold1863 Both SNP 0015.scaffold00050 343196 1 T C scaffold1863 Both SNP 0015.scaffold00050 343256 1 T C scaffold1863 Both SNP 0015.scaffold00050 343272 1 C T scaffold1863 Both SNP 0015.scaffold00050 343296 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 343345 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 343348 1 C A scaffold1863 Both SNP 0015.scaffold00050 343364 1 T C scaffold1863 Both SNP 0015.scaffold00050 343426 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 343435 1 C A scaffold1863 Both SNP 0015.scaffold00050 343481 1 A G scaffold1863 Both SNP 0015.scaffold00050 343485 1 T C scaffold1863 Both SNP 0015.scaffold00050 343514 1 A T scaffold1863 Both SNP 0015.scaffold00050 343576 1 T A scaffold1863 Both SNP 0015.scaffold00050 343699 1 A C scaffold1863 Both SNP 0015.scaffold00050 343752 1 C A scaffold1863 ScafM INDEL 0015.scaffold00050 343803 3 TCA ... scaffold1863 ScafM SNP 0015.scaffold00050 343851 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 343861 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 343893 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 343900 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 343913 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 343916 1 G A scaffold1863 Both SNP 0015.scaffold00050 343951 1 T C scaffold1863 Both SNP 0015.scaffold00050 344043 1 A G scaffold1863 Both INDEL 0015.scaffold00050 344056 1 . T scaffold1863 Both SNP 0015.scaffold00050 344067 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 344089 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 344105 1 T C scaffold1863 Both SNP 0015.scaffold00050 344158 1 A C scaffold1863 Both SNP 0015.scaffold00050 344164 1 A G scaffold1863 Both SNP 0015.scaffold00050 344172 1 C T scaffold1863 ReadM SNP 0015.scaffold00050 344252 1 T G - ReadM SNP 0015.scaffold00050 344335 1 C A - ReadM SNP 0015.scaffold00050 344460 1 A G - ReadM SNP 0015.scaffold00050 344465 1 A G - ReadM SNP 0015.scaffold00050 344832 1 G A - ScafM SNP 0015.scaffold00050 345607 1 C T scaffold1863 ScafM INDEL 0015.scaffold00050 345634 1 . A scaffold1863 ScafM SNP 0015.scaffold00050 345644 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 345665 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 345667 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 345771 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 345791 1 T G scaffold1863 ScafM SNP 0015.scaffold00050 345809 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 345836 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 345863 1 C T scaffold1863 ReadM INDEL 0015.scaffold00050 346132 1 . A - ReadM SNP 0015.scaffold00050 346242 1 G A - ReadM SNP 0015.scaffold00050 346598 1 A G - ReadM SNP 0015.scaffold00050 346716 1 G T - ReadM SNP 0015.scaffold00050 346785 1 C G - ReadM SNP 0015.scaffold00050 346787 1 T G - ScafM SNP 0015.scaffold00050 346816 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 346855 1 G T scaffold1863 ScafM SNP 0015.scaffold00050 346867 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 346880 1 T C scaffold1863 Both SNP 0015.scaffold00050 346914 1 G A scaffold1863 Both SNP 0015.scaffold00050 346926 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 346982 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 346989 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 346997 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 347020 2 AT CG scaffold1863 ReadM SNP 0015.scaffold00050 347129 1 C T - ReadM SNP 0015.scaffold00050 347137 1 G C - ReadM SNP 0015.scaffold00050 347182 1 C G - ReadM SNP 0015.scaffold00050 347215 1 C T - ReadM SNP 0015.scaffold00050 347231 1 A T - ReadM SNP 0015.scaffold00050 347320 1 G T - ReadM SNP 0015.scaffold00050 347432 1 A G - ReadM SNP 0015.scaffold00050 347454 1 C A - ReadM SNP 0015.scaffold00050 347476 1 G A - ReadM INDEL 0015.scaffold00050 347486 1 G . - ReadM SNP 0015.scaffold00050 347521 1 C T - ScafM SNP 0015.scaffold00050 347609 2 AC GT scaffold1863 ScafM SNP 0015.scaffold00050 347644 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 347646 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 347664 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 347679 1 G C scaffold1863 ScafM SNP 0015.scaffold00050 347695 1 G A scaffold1863 Both SNP 0015.scaffold00050 347699 1 T C scaffold1863 Both SNP 0015.scaffold00050 347768 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 347807 1 A T scaffold1863 ScafM SNP 0015.scaffold00050 347819 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 347821 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 347824 1 T C scaffold1863 Both SNP 0015.scaffold00050 347868 1 A G scaffold1863 Both SNP 0015.scaffold00050 347883 1 C T scaffold1863 Both SNP 0015.scaffold00050 347894 1 C A scaffold1863 Both SNP 0015.scaffold00050 347956 1 A C scaffold1863 Both SNP 0015.scaffold00050 347987 1 C T scaffold1863 Both SNP 0015.scaffold00050 347991 1 C T scaffold1863 ScafM SNP 0015.scaffold00050 348068 1 G A scaffold1863 ScafM SNP 0015.scaffold00050 348070 1 A C scaffold1863 ScafM SNP 0015.scaffold00050 348078 1 T A scaffold1863 ScafM SNP 0015.scaffold00050 348081 1 A G scaffold1863 ScafM SNP 0015.scaffold00050 348133 1 T C scaffold1863 ScafM SNP 0015.scaffold00050 348314 1 C T scaffold16483 ScafM SNP 0015.scaffold00050 348322 1 A C scaffold16483 ScafM INDEL 0015.scaffold00050 348325 1 . A scaffold16483 ScafM SNP 0015.scaffold00050 348339 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348343 1 T C scaffold16483 ScafM SNP 0015.scaffold00050 348369 1 A C scaffold16483 ScafM SNP 0015.scaffold00050 348373 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348392 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348396 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348408 1 A T scaffold16483 ScafM SNP 0015.scaffold00050 348413 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348415 1 G C scaffold16483 ScafM SNP 0015.scaffold00050 348421 1 T C scaffold16483 ScafM SNP 0015.scaffold00050 348423 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348434 1 T G scaffold16483 ScafM SNP 0015.scaffold00050 348445 2 GA AG scaffold16483 ScafM SNP 0015.scaffold00050 348448 1 G T scaffold16483 ScafM SNP 0015.scaffold00050 348452 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348466 1 C G scaffold16483 ScafM SNP 0015.scaffold00050 348478 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348491 1 T G scaffold16483 ScafM SNP 0015.scaffold00050 348503 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348508 4 TCAA ATTC scaffold16483 ScafM SNP 0015.scaffold00050 348514 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348516 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348522 1 C T scaffold16483 ScafM SNP 0015.scaffold00050 348525 2 CG TA scaffold16483 ScafM INDEL 0015.scaffold00050 348530 5 TGGTC ..... scaffold16483 ScafM SNP 0015.scaffold00050 348541 1 A T scaffold16483 ScafM SNP 0015.scaffold00050 348543 1 G C scaffold16483 ScafM SNP 0015.scaffold00050 348555 1 A G scaffold16483 ScafM SNP 0015.scaffold00050 348558 1 A C scaffold16483 ScafM SNP 0015.scaffold00050 348562 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348564 1 T C scaffold16483 ScafM SNP 0015.scaffold00050 348578 1 A T scaffold16483 ScafM INDEL 0015.scaffold00050 348579 1 . C scaffold16483 ScafM SNP 0015.scaffold00050 348582 2 AC GT scaffold16483 ScafM SNP 0015.scaffold00050 348590 1 A G scaffold16483 ScafM SNP 0015.scaffold00050 348597 1 T C scaffold16483 ScafM INDEL 0015.scaffold00050 348603 1 . T scaffold16483 ScafM SNP 0015.scaffold00050 348608 1 C T scaffold16483 ScafM SNP 0015.scaffold00050 348613 1 T C scaffold16483 ScafM SNP 0015.scaffold00050 348634 1 A T scaffold16483 ScafM SNP 0015.scaffold00050 348638 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348644 1 C T scaffold16483 ScafM SNP 0015.scaffold00050 348652 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348659 1 T A scaffold16483 ScafM SNP 0015.scaffold00050 348674 1 A T scaffold16483 ScafM SNP 0015.scaffold00050 348707 1 T G scaffold16483 ScafM INDEL 0015.scaffold00050 348732 2 TT .. scaffold16483 ScafM SNP 0015.scaffold00050 348751 1 T C scaffold16483 ScafM INDEL 0015.scaffold00050 348760 3 ATT ... scaffold16483 ScafM INDEL 0015.scaffold00050 348775 1 . A scaffold16483 ScafM INDEL 0015.scaffold00050 348789 4 .... TACA scaffold16483 ScafM SNP 0015.scaffold00050 348804 2 CT TG scaffold16483 ScafM INDEL 0015.scaffold00050 348837 4 GCCA .... scaffold16483 ScafM SNP 0015.scaffold00050 348842 1 A C scaffold16483 ScafM INDEL 0015.scaffold00050 348845 4 AGCC ...T scaffold16483 ScafM SNP 0015.scaffold00050 348856 1 A G scaffold16483 ScafM SNP 0015.scaffold00050 348860 1 T C scaffold16483 ScafM SNP 0015.scaffold00050 348866 1 G C scaffold16483 ScafM SNP 0015.scaffold00050 348880 1 C G scaffold16483 ScafM SNP 0015.scaffold00050 348888 1 G A scaffold16483 ScafM SNP 0015.scaffold00050 348897 1 T A scaffold16483 ReadM SNP 0015.scaffold00050 350620 1 C T - ReadM INDEL 0015.scaffold00050 350859 1 A . - ReadM SNP 0015.scaffold00050 350899 1 C T - ReadM SNP 0015.scaffold00050 350951 1 G A - ReadM SNP 0015.scaffold00050 350960 1 G A - ReadM SNP 0015.scaffold00050 351882 1 C T - ReadM SNP 0015.scaffold00050 351903 1 C T - ReadM INDEL 0015.scaffold00050 352152 1 T . - ReadM SNP 0015.scaffold00050 352209 1 G C - ReadM SNP 0015.scaffold00050 352367 1 G C - ReadM SNP 0015.scaffold00050 352410 1 A T - ReadM SNP 0015.scaffold00050 352432 1 T C - ReadM SNP 0015.scaffold00050 352853 1 T C - ReadM SNP 0015.scaffold00050 355145 1 A G - ReadM INDEL 0015.scaffold00050 355560 1 . A - ReadM SNP 0015.scaffold00050 355612 1 T C - ReadM SNP 0015.scaffold00050 355642 1 C T - ReadM SNP 0015.scaffold00050 355761 1 T C - ReadM SNP 0015.scaffold00050 356105 1 G A - ReadM SNP 0015.scaffold00050 356116 1 G A - ReadM SNP 0015.scaffold00050 356124 1 C T - ReadM SNP 0015.scaffold00050 356310 1 A C - ReadM INDEL 0015.scaffold00050 356388 1 . C - ReadM SNP 0015.scaffold00050 356462 1 C T - ReadM SNP 0015.scaffold00050 356631 1 T G - ReadM SNP 0015.scaffold00050 356638 1 C A - ReadM SNP 0015.scaffold00050 356658 1 T C - ReadM SNP 0015.scaffold00050 356732 1 C T - ReadM SNP 0015.scaffold00050 356800 1 T G - ReadM SNP 0015.scaffold00050 356866 1 G C - ReadM SNP 0015.scaffold00050 356989 1 G T - ReadM SNP 0015.scaffold00050 357002 1 A T - ScafM INDEL 0015.scaffold00050 357939 3 ... TTT scaffold4424 ReadM INDEL 0015.scaffold00050 359728 1 . T - ScafM SNP 0015.scaffold00050 360625 1 T A scaffold8774 ScafM SNP 0015.scaffold00050 360653 1 C T scaffold8774 ScafM SNP 0015.scaffold00050 360655 1 T C scaffold8774 ScafM INDEL 0015.scaffold00050 360756 5 ATTAA ..... scaffold8774 ScafM SNP 0015.scaffold00050 360836 1 T G scaffold8774 ScafM SNP 0015.scaffold00050 360856 1 A C scaffold8774 ScafM SNP 0015.scaffold00050 360872 1 C A scaffold8774 ScafM SNP 0015.scaffold00050 360908 2 CA TG scaffold8774 ScafM INDEL 0015.scaffold00050 360933 3 CTT ... scaffold8774 ScafM SNP 0015.scaffold00050 360940 1 A T scaffold8774 ScafM SNP 0015.scaffold00050 360956 1 T C scaffold8774 ScafM INDEL 0015.scaffold00050 360988 20 TTTCAATTTCATGCTCTAGC .................... scaffold8774 ScafM SNP 0015.scaffold00050 361038 1 A G scaffold8774 ReadM SNP 0015.scaffold00050 363078 1 C T - ReadM SNP 0015.scaffold00050 363247 1 T A - ScafM SNP 0015.scaffold00050 363303 1 G A scaffold35342 ScafM SNP 0015.scaffold00050 363316 1 G A scaffold35342 ScafM SNP 0015.scaffold00050 363318 1 G A scaffold35342 ScafM SNP 0015.scaffold00050 363336 1 A T scaffold35342 Both SNP 0015.scaffold00050 363349 1 T G scaffold35342 ScafM SNP 0015.scaffold00050 363410 1 C T scaffold35342 ScafM SNP 0015.scaffold00050 363446 1 G A scaffold35342 ScafM INDEL 0015.scaffold00050 363532 1 A . scaffold35342 ScafM SNP 0015.scaffold00050 363536 1 T C scaffold35342 ScafM SNP 0015.scaffold00050 363605 1 A T scaffold35342 ScafM SNP 0015.scaffold00050 363705 1 T C scaffold35342 Both SNP 0015.scaffold00050 363788 1 C G scaffold35342 ReadM SNP 0015.scaffold00050 363798 1 C T - ScafM INDEL 0015.scaffold00050 363798 16 CTTTCATTTTGTTGAT ................ scaffold35342 ScafM INDEL 0015.scaffold00050 363820 7 TTTTGGG ....... scaffold35342 ScafM SNP 0015.scaffold00050 363834 2 GT AA scaffold35342 ScafM SNP 0015.scaffold00050 363849 1 T C scaffold35342 ScafM SNP 0015.scaffold00050 363854 1 A G scaffold35342 ScafM SNP 0015.scaffold00050 363889 1 T C scaffold35342 ScafM SNP 0015.scaffold00050 363903 1 T A scaffold35342 ScafM SNP 0015.scaffold00050 363911 1 G A scaffold35342 Both SNP 0015.scaffold00050 363948 1 T C scaffold35342 Both SNP 0015.scaffold00050 364032 1 A T scaffold35342 ScafM SNP 0015.scaffold00050 364049 1 A G scaffold35342 ScafM INDEL 0015.scaffold00050 364057 3 ... CGA scaffold35342 ScafM SNP 0015.scaffold00050 364096 1 A G scaffold35342 ScafM SNP 0015.scaffold00050 364130 1 G C scaffold35342 ScafM SNP 0015.scaffold00050 364152 1 G T scaffold35342 ScafM INDEL 0015.scaffold00050 364153 3 ... TTT scaffold35342 ScafM SNP 0015.scaffold00050 364167 1 A G scaffold35342 ScafM INDEL 0015.scaffold00050 364218 1 . T scaffold35342 Both SNP 0015.scaffold00050 364220 1 C T scaffold35342 ScafM SNP 0015.scaffold00050 364230 1 T G scaffold35342 ScafM SNP 0015.scaffold00050 364248 1 A G scaffold35342 ScafM SNP 0015.scaffold00050 364258 1 T A scaffold35342 ScafM SNP 0015.scaffold00050 364260 1 T G scaffold35342 ScafM SNP 0015.scaffold00050 364270 1 T C scaffold35342 ScafM SNP 0015.scaffold00050 364285 1 A T scaffold35342 ScafM SNP 0015.scaffold00050 364288 1 C A scaffold35342 Both SNP 0015.scaffold00050 364329 1 A T scaffold35342 ScafM INDEL 0015.scaffold00050 364427 3 TTT ... scaffold35342 ScafM SNP 0015.scaffold00050 364455 1 T G scaffold35342 ScafM SNP 0015.scaffold00050 364459 1 C T scaffold35342 ScafM SNP 0015.scaffold00050 364462 1 T C scaffold35342 ScafM SNP 0015.scaffold00050 364483 1 C T scaffold35342 ScafM SNP 0015.scaffold00050 364519 1 G T scaffold35342 ScafM SNP 0015.scaffold00050 364541 1 A G scaffold35342 ReadM INDEL 0015.scaffold00050 364695 1 . A - ReadM SNP 0015.scaffold00050 364972 1 G A - ScafM SNP 0015.scaffold00050 365252 1 G T scaffold8774 ScafM INDEL 0015.scaffold00050 365256 1 . G scaffold8774 ScafM SNP 0015.scaffold00050 365273 1 A G scaffold8774 Both SNP 0015.scaffold00050 365289 1 C T scaffold8774 ReadM SNP 0015.scaffold00050 365350 1 G A - ReadM SNP 0015.scaffold00050 365423 1 A G - ScafM SNP 0015.scaffold00050 378124 1 C A scaffold8774 ScafM SNP 0015.scaffold00050 378147 1 A G scaffold8774 ScafM SNP 0015.scaffold00050 378157 2 AT GG scaffold8774 ScafM SNP 0015.scaffold00050 378164 1 A G scaffold8774 ScafM SNP 0015.scaffold00050 378193 1 C T scaffold8774 ScafM SNP 0015.scaffold00050 378195 1 G C scaffold8774 ScafM SNP 0015.scaffold00050 378203 1 A G scaffold8774 ScafM SNP 0015.scaffold00050 378205 1 T G scaffold8774 ScafM SNP 0015.scaffold00050 378238 1 T C scaffold8774 ScafM SNP 0015.scaffold00050 378245 1 A T scaffold8774 ScafM SNP 0015.scaffold00050 378247 1 T G scaffold8774 ScafM SNP 0015.scaffold00050 378249 1 A G scaffold8774 ScafM SNP 0015.scaffold00050 378254 1 C T scaffold8774 ReadM SNP 0015.scaffold00050 379047 1 C T - ReadM SNP 0015.scaffold00050 379130 1 A G - ReadM SNP 0015.scaffold00050 379133 1 C G - ReadM SNP 0015.scaffold00050 379238 1 C G - ReadM SNP 0015.scaffold00050 379292 1 C A - ReadM INDEL 0015.scaffold00050 379302 1 T . - ReadM SNP 0015.scaffold00050 379335 1 G A - ReadM SNP 0015.scaffold00050 379416 1 C T - ReadM INDEL 0015.scaffold00050 379439 1 C . - ReadM SNP 0015.scaffold00050 379501 1 A C - ReadM INDEL 0015.scaffold00050 379571 1 A . - ReadM SNP 0015.scaffold00050 379647 1 A C - ReadM SNP 0015.scaffold00050 379667 1 A C - ReadM SNP 0015.scaffold00050 379722 1 G T - ReadM SNP 0015.scaffold00050 379761 1 G A - ReadM SNP 0015.scaffold00050 379827 1 G A - ReadM SNP 0015.scaffold00050 379931 1 A T - ReadM SNP 0015.scaffold00050 380066 1 C T - Both SNP 0015.scaffold00050 380204 1 T C scaffold8774 Both SNP 0015.scaffold00050 380227 1 T C scaffold8774 ScafM SNP 0015.scaffold00050 380234 1 C T scaffold8774 ReadM INDEL 0015.scaffold00050 380267 1 G . - ReadM SNP 0015.scaffold00050 380290 1 T C - ReadM SNP 0015.scaffold00050 380359 1 C A - ReadM SNP 0015.scaffold00050 380414 1 C T - ReadM SNP 0015.scaffold00050 380425 1 A G - ReadM INDEL 0015.scaffold00050 380470 1 A . - ReadM INDEL 0015.scaffold00050 380508 1 . A - ReadM SNP 0015.scaffold00050 380548 1 G C - ReadM SNP 0015.scaffold00050 380593 1 G A - ReadM SNP 0015.scaffold00050 380620 1 G A - ReadM SNP 0015.scaffold00050 380654 1 T C - ReadM SNP 0015.scaffold00050 380689 1 A C - ReadM SNP 0015.scaffold00050 380752 1 A C - ReadM SNP 0015.scaffold00050 380835 1 G A - ReadM SNP 0015.scaffold00050 380859 1 T C - ReadM SNP 0015.scaffold00050 380997 1 T C - ReadM SNP 0015.scaffold00050 381093 1 C T - ReadM SNP 0015.scaffold00050 381187 1 G A - ReadM SNP 0015.scaffold00050 381203 1 T G - ReadM SNP 0015.scaffold00050 381235 1 G A - ReadM SNP 0015.scaffold00050 381267 1 C T - ReadM SNP 0015.scaffold00050 381300 1 T A - ReadM SNP 0015.scaffold00050 381759 1 C A - ReadM SNP 0015.scaffold00050 381833 1 T A - ReadM SNP 0015.scaffold00050 381906 1 T C - ReadM SNP 0015.scaffold00050 382015 1 T A - ReadM SNP 0015.scaffold00050 382061 1 G A - ReadM SNP 0015.scaffold00050 382194 1 A T - ReadM SNP 0015.scaffold00050 382235 1 G T - ReadM SNP 0015.scaffold00050 382316 1 T A - ReadM SNP 0015.scaffold00050 382358 1 T C - ReadM SNP 0015.scaffold00050 382508 1 T A - ReadM SNP 0015.scaffold00050 382589 1 G A - ReadM SNP 0015.scaffold00050 382745 1 T C - ReadM SNP 0015.scaffold00050 382848 1 T C - ReadM SNP 0015.scaffold00050 382933 1 C A - ReadM SNP 0015.scaffold00050 383184 1 T C - ReadM SNP 0015.scaffold00050 383206 1 C T - ReadM SNP 0015.scaffold00050 383307 1 A T - ReadM SNP 0015.scaffold00050 383370 1 T G - ReadM SNP 0015.scaffold00050 383396 1 A C - ReadM SNP 0015.scaffold00050 383541 1 A T - ReadM SNP 0015.scaffold00050 383593 1 C T - ReadM INDEL 0015.scaffold00050 383749 1 . A - ReadM SNP 0015.scaffold00050 383757 1 T A - ReadM SNP 0015.scaffold00050 383794 1 T C - ReadM SNP 0015.scaffold00050 383849 1 C T - ReadM SNP 0015.scaffold00050 384009 1 T C - ReadM SNP 0015.scaffold00050 384031 1 A G - ReadM SNP 0015.scaffold00050 384112 1 G A - ReadM SNP 0015.scaffold00050 384236 1 C T - ReadM SNP 0015.scaffold00050 384319 1 G A - ReadM SNP 0015.scaffold00050 384371 1 G A - ReadM SNP 0015.scaffold00050 384397 1 A G - ReadM SNP 0015.scaffold00050 384509 1 C A - ReadM SNP 0015.scaffold00050 384519 1 G A - ReadM SNP 0015.scaffold00050 384530 1 T C - ReadM SNP 0015.scaffold00050 384582 1 G A - ReadM SNP 0015.scaffold00050 384820 1 A C - ReadM SNP 0015.scaffold00050 384909 1 T C - ReadM SNP 0015.scaffold00050 384924 1 A G - ReadM SNP 0015.scaffold00050 384939 1 A T - ReadM SNP 0015.scaffold00050 385053 1 T A - ReadM SNP 0015.scaffold00050 385082 1 A T - ReadM SNP 0015.scaffold00050 385098 1 A G - ReadM SNP 0015.scaffold00050 385120 1 T C - ReadM SNP 0015.scaffold00050 385134 1 A G - ReadM SNP 0015.scaffold00050 385200 1 T A - ReadM SNP 0015.scaffold00050 385261 1 C T - ReadM SNP 0015.scaffold00050 385282 1 G T - ReadM SNP 0015.scaffold00050 385304 1 G C - ReadM SNP 0015.scaffold00050 385415 1 A G - ReadM SNP 0015.scaffold00050 385427 1 A G - ReadM SNP 0015.scaffold00050 385442 1 T G - ReadM INDEL 0015.scaffold00050 385642 1 . G - ReadM INDEL 0015.scaffold00050 385742 1 . T - ReadM SNP 0015.scaffold00050 385793 1 C T - ReadM SNP 0015.scaffold00050 385880 1 A T - ReadM SNP 0015.scaffold00050 385888 1 A T - ReadM INDEL 0015.scaffold00050 386034 1 . T - ReadM SNP 0015.scaffold00050 386047 1 T C - ReadM SNP 0015.scaffold00050 386157 1 T A - ReadM SNP 0015.scaffold00050 386172 1 T C - ScafM SNP 0016.scaffold00051 8 1 A T scaffold29729 ScafM INDEL 0016.scaffold00051 10457 19 TTTATATATTTAAAATCTT ................... scaffold2477 ScafM INDEL 0016.scaffold00051 10870 1 . T scaffold2477 ReadM SNP 0016.scaffold00051 48027 1 T C - ScafM INDEL 0016.scaffold00051 49570 1 . T scaffold986 ScafM SNP 0016.scaffold00051 52816 1 C T scaffold8236 ScafM INDEL 0016.scaffold00051 82273 1 . G scaffold8236 ScafM INDEL 0016.scaffold00051 95048 4 AATA .... scaffold8236 ScafM INDEL 0016.scaffold00051 95057 26 AAGCCATATAACCACTCCCTCCCCAA .......................... scaffold8236 ScafM INDEL 0016.scaffold00051 99158 29 ............................. CCTCTCCCCTCCCCCCCCCCCCCCCCCCC scaffold8236 ReadM SNP 0016.scaffold00051 100802 1 A G - ScafM INDEL 0016.scaffold00051 130547 11 ........... CCCCTCCCCCC scaffold14606 ScafM INDEL 0016.scaffold00051 151235 1 . A scaffold14606 ScafM SNP 0016.scaffold00051 158106 1 C T scaffold14606 ScafM INDEL 0016.scaffold00051 170063 11 TGCTTCGGGCT ........... scaffold14606 ScafM INDEL 0016.scaffold00051 170076 3 GTC ..A scaffold14606 ReadM SNP 0016.scaffold00051 247962 1 G A - ReadM INDEL 0016.scaffold00051 261617 1 . T - ReadM INDEL 0016.scaffold00051 261655 1 T . - ScafM INDEL 0016.scaffold00051 278751 10 CCCTCCCCGT .......... scaffold11701 ScafM SNP 0016.scaffold00051 292817 2 CG TC scaffold10306 ScafM INDEL 0016.scaffold00051 324189 1 C . scaffold2209 ScafM INDEL 0016.scaffold00051 324203 34 CATTACCAAATAAATAGGAGGAAGGAAGCTCATT .................................. scaffold2209 ScafM INDEL 0016.scaffold00051 325574 1 . T scaffold2209 ScafM SNP 0016.scaffold00051 337487 1 T A scaffold2209 ScafM INDEL 0016.scaffold00051 405423 4 .... TTTG scaffold2209 ScafM INDEL 0016.scaffold00051 435709 1 . A scaffold2209 ScafM SNP 0016.scaffold00051 446372 1 A G scaffold38402 ScafM INDEL 0016.scaffold00051 482871 9 TCAAGTTGA ......... scaffold26905 ScafM SNP 0016.scaffold00051 486925 1 T A scaffold28204 ScafM SNP 0016.scaffold00051 486932 1 G A scaffold28204 ScafM SNP 0016.scaffold00051 487033 1 A G scaffold28204 ScafM SNP 0016.scaffold00051 497738 1 G A scaffold4312 ScafM SNP 0016.scaffold00051 497764 1 G T scaffold4312 ScafM INDEL 0016.scaffold00051 497783 1 . A scaffold4312 ScafM INDEL 0017.scaffold00052 38 1 . G scaffold1087 ScafM SNP 0017.scaffold00052 55 1 G A scaffold1087 ScafM INDEL 0017.scaffold00052 153 3 AAG ... scaffold1087 ScafM SNP 0017.scaffold00052 227 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 426 1 A C scaffold1087 ScafM SNP 0017.scaffold00052 453 1 T A scaffold1087 ScafM SNP 0017.scaffold00052 464 1 C A scaffold1087 ScafM SNP 0017.scaffold00052 479 1 C T scaffold1087 ScafM SNP 0017.scaffold00052 501 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 535 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 553 1 A C scaffold1087 ScafM SNP 0017.scaffold00052 592 1 T A scaffold1087 ScafM SNP 0017.scaffold00052 605 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 656 1 A C scaffold1087 ScafM SNP 0017.scaffold00052 659 1 G T scaffold1087 ScafM SNP 0017.scaffold00052 663 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 741 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 751 1 T G scaffold1087 ScafM SNP 0017.scaffold00052 903 1 T C scaffold1087 ScafM SNP 0017.scaffold00052 1001 1 T C scaffold1087 ScafM SNP 0017.scaffold00052 1020 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 1197 1 T C scaffold1087 ScafM SNP 0017.scaffold00052 1357 1 C A scaffold1087 ScafM SNP 0017.scaffold00052 1459 1 T C scaffold1087 ScafM SNP 0017.scaffold00052 1480 1 A G scaffold1087 ScafM INDEL 0017.scaffold00052 1553 2 CC .. scaffold1087 ScafM SNP 0017.scaffold00052 1777 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 1797 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 1890 1 C T scaffold1087 ScafM SNP 0017.scaffold00052 1899 2 CA TG scaffold1087 ScafM SNP 0017.scaffold00052 1942 1 G T scaffold1087 ScafM SNP 0017.scaffold00052 1960 1 T A scaffold1087 ScafM SNP 0017.scaffold00052 2048 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 2122 1 C G scaffold1087 ScafM SNP 0017.scaffold00052 2140 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 2151 1 C G scaffold1087 ScafM SNP 0017.scaffold00052 2182 1 T C scaffold1087 ScafM SNP 0017.scaffold00052 2470 1 C A scaffold1087 ScafM SNP 0017.scaffold00052 2658 1 A C scaffold1087 ScafM INDEL 0017.scaffold00052 2686 1 A . scaffold1087 ScafM SNP 0017.scaffold00052 2757 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 2772 1 A G scaffold1087 ScafM SNP 0017.scaffold00052 2831 1 G A scaffold1087 ScafM SNP 0017.scaffold00052 3004 1 C T scaffold1087 ScafM INDEL 0017.scaffold00052 7909 30 .............................. CTCAGTTCTTTATTAATTATAACAAAATTA scaffold8599 ScafM INDEL 0017.scaffold00052 8390 1 . A scaffold8599 ScafM INDEL 0017.scaffold00052 13473 1 . A scaffold8599 ScafM SNP 0017.scaffold00052 23610 1 T G scaffold8599 ScafM INDEL 0017.scaffold00052 44678 1 . A scaffold301 ScafM INDEL 0017.scaffold00052 47697 1 . T scaffold301 ReadM SNP 0017.scaffold00052 56022 1 G A - ReadM INDEL 0017.scaffold00052 86456 1 C . - ScafM INDEL 0017.scaffold00052 92330 1 . T scaffold301 ScafM INDEL 0017.scaffold00052 98272 10 ATGTTTTAAT .......... scaffold301 ScafM INDEL 0017.scaffold00052 99918 1 T . scaffold301 ReadM INDEL 0017.scaffold00052 101811 1 G . - ReadM SNP 0017.scaffold00052 103124 1 T C - ReadM SNP 0017.scaffold00052 103267 1 A T - ReadM SNP 0017.scaffold00052 103349 1 A T - ReadM SNP 0017.scaffold00052 103392 1 C T - ScafM SNP 0017.scaffold00052 104191 1 T A scaffold301 ScafM SNP 0017.scaffold00052 104355 1 G A scaffold301 ScafM SNP 0017.scaffold00052 104374 1 G C scaffold301 ScafM SNP 0017.scaffold00052 104513 1 C T scaffold301 Both SNP 0017.scaffold00052 104863 1 A G scaffold301 Both SNP 0017.scaffold00052 105199 1 T C scaffold301 Both SNP 0017.scaffold00052 105557 1 G T scaffold301 Both SNP 0017.scaffold00052 105750 1 T A scaffold301 Both SNP 0017.scaffold00052 106102 1 G A scaffold301 ScafM INDEL 0017.scaffold00052 106261 13 ............. GGTAACAATTTAT scaffold301 Both SNP 0017.scaffold00052 106523 1 A G scaffold301 Both SNP 0017.scaffold00052 106564 1 G A scaffold301 Both SNP 0017.scaffold00052 106573 1 A G scaffold301 ScafM SNP 0017.scaffold00052 106897 1 C T scaffold301 ScafM SNP 0017.scaffold00052 106911 1 A T scaffold301 ScafM SNP 0017.scaffold00052 106976 1 G A scaffold301 ScafM SNP 0017.scaffold00052 106979 1 T G scaffold301 ScafM SNP 0017.scaffold00052 107137 1 G A scaffold301 ScafM SNP 0017.scaffold00052 107918 1 C T scaffold301 ScafM SNP 0017.scaffold00052 107949 1 C G scaffold301 ReadM SNP 0017.scaffold00052 108389 1 A T - ReadM SNP 0017.scaffold00052 108605 1 T C - ScafM SNP 0017.scaffold00052 108812 1 T C scaffold301 ScafM SNP 0017.scaffold00052 109045 1 G A scaffold301 ReadM SNP 0017.scaffold00052 112167 1 G A - ReadM SNP 0017.scaffold00052 113337 1 T G - ReadM SNP 0017.scaffold00052 113391 1 T C - ReadM SNP 0017.scaffold00052 113720 1 G A - ScafM SNP 0017.scaffold00052 114056 1 C T scaffold301 Both SNP 0017.scaffold00052 114122 1 G A scaffold301 Both SNP 0017.scaffold00052 114128 1 A G scaffold301 Both SNP 0017.scaffold00052 114585 1 T A scaffold301 Both SNP 0017.scaffold00052 114683 1 G A scaffold301 ReadM SNP 0017.scaffold00052 115140 1 T C - ReadM SNP 0017.scaffold00052 115149 1 G A - ReadM SNP 0017.scaffold00052 115193 1 A G - ReadM SNP 0017.scaffold00052 115334 1 G A - ReadM SNP 0017.scaffold00052 120006 1 G T - ReadM SNP 0017.scaffold00052 120105 1 T G - ReadM SNP 0017.scaffold00052 120239 1 A T - ReadM SNP 0017.scaffold00052 120677 1 C A - ReadM SNP 0017.scaffold00052 120775 1 T G - ReadM SNP 0017.scaffold00052 121087 1 T G - ReadM SNP 0017.scaffold00052 121416 1 C A - Both SNP 0017.scaffold00052 121589 1 G T scaffold301 Both SNP 0017.scaffold00052 121751 1 C T scaffold301 Both SNP 0017.scaffold00052 121774 1 T C scaffold301 ReadM SNP 0017.scaffold00052 122458 1 G C - ReadM SNP 0017.scaffold00052 122553 1 A G - Both SNP 0017.scaffold00052 123427 1 C T scaffold301 Both SNP 0017.scaffold00052 123434 1 T C scaffold301 Both SNP 0017.scaffold00052 124293 1 C T scaffold301 Both SNP 0017.scaffold00052 124310 1 A G scaffold301 Both SNP 0017.scaffold00052 124361 1 A T scaffold301 Both SNP 0017.scaffold00052 124484 1 A C scaffold301 ReadM SNP 0017.scaffold00052 124586 1 A G - ReadM SNP 0017.scaffold00052 124609 1 C T - Both SNP 0017.scaffold00052 125019 1 T C scaffold301 Both SNP 0017.scaffold00052 125122 1 T C scaffold301 ReadM SNP 0017.scaffold00052 126527 1 C G - ReadM SNP 0017.scaffold00052 126575 1 A C - ScafM SNP 0017.scaffold00052 128062 1 T C scaffold301 ReadM SNP 0017.scaffold00052 128270 1 A G - ReadM SNP 0017.scaffold00052 128414 1 C T - ReadM SNP 0017.scaffold00052 128469 1 T G - ReadM SNP 0017.scaffold00052 128689 1 T C - ReadM SNP 0017.scaffold00052 129760 1 T G - ReadM SNP 0017.scaffold00052 129776 1 T C - ReadM SNP 0017.scaffold00052 130166 1 G A - ReadM SNP 0017.scaffold00052 130177 1 T C - ReadM SNP 0017.scaffold00052 130646 1 G C - ReadM SNP 0017.scaffold00052 130818 1 G C - ReadM SNP 0017.scaffold00052 131382 1 A G - ReadM SNP 0017.scaffold00052 131483 1 A G - ReadM SNP 0017.scaffold00052 132121 1 T C - ReadM SNP 0017.scaffold00052 132202 1 G A - ReadM SNP 0017.scaffold00052 132553 1 C A - ReadM SNP 0017.scaffold00052 132725 1 G T - ReadM SNP 0017.scaffold00052 132834 1 C T - Both SNP 0017.scaffold00052 133133 1 G A scaffold825 Both SNP 0017.scaffold00052 133157 1 T C scaffold825 Both SNP 0017.scaffold00052 133197 1 A G scaffold825 ReadM SNP 0017.scaffold00052 133275 1 C T - ReadM SNP 0017.scaffold00052 133444 1 T C - ReadM SNP 0017.scaffold00052 133626 1 G A - ReadM SNP 0017.scaffold00052 133813 1 T C - ReadM SNP 0017.scaffold00052 133825 1 A G - ReadM SNP 0017.scaffold00052 133935 1 C T - ReadM SNP 0017.scaffold00052 134634 1 T C - ReadM SNP 0017.scaffold00052 134989 1 T C - ReadM SNP 0017.scaffold00052 135005 1 A G - ReadM SNP 0017.scaffold00052 135032 1 A G - ReadM SNP 0017.scaffold00052 135435 1 T C - ReadM SNP 0017.scaffold00052 135964 1 A T - ReadM SNP 0017.scaffold00052 136076 1 A G - ReadM SNP 0017.scaffold00052 136365 1 C G - ReadM SNP 0017.scaffold00052 136662 1 A T - ReadM SNP 0017.scaffold00052 136825 1 A T - ReadM SNP 0017.scaffold00052 137658 1 G C - ReadM SNP 0017.scaffold00052 137822 1 T C - ReadM SNP 0017.scaffold00052 137858 1 C T - ReadM SNP 0017.scaffold00052 137917 1 C A - ReadM SNP 0017.scaffold00052 137964 1 C T - ReadM SNP 0017.scaffold00052 138147 1 A T - ReadM SNP 0017.scaffold00052 138184 1 A C - ReadM SNP 0017.scaffold00052 138480 1 A G - ReadM SNP 0017.scaffold00052 138541 1 G A - ReadM SNP 0017.scaffold00052 138660 1 A C - ReadM SNP 0017.scaffold00052 140005 1 C G - ReadM SNP 0017.scaffold00052 140127 1 G A - ReadM SNP 0017.scaffold00052 140204 1 A G - ReadM SNP 0017.scaffold00052 140678 1 C G - ReadM SNP 0017.scaffold00052 140713 1 A G - ReadM SNP 0017.scaffold00052 140791 1 A G - ReadM SNP 0017.scaffold00052 140824 1 C T - ReadM SNP 0017.scaffold00052 141088 1 A G - ReadM SNP 0017.scaffold00052 141664 1 T C - ReadM SNP 0017.scaffold00052 141706 1 G C - ReadM SNP 0017.scaffold00052 142131 1 A G - ReadM SNP 0017.scaffold00052 142261 1 A G - ReadM SNP 0017.scaffold00052 142400 1 T A - ReadM SNP 0017.scaffold00052 142445 1 T A - ReadM SNP 0017.scaffold00052 142829 1 G A - ScafM SNP 0017.scaffold00052 142883 1 A G scaffold301 ScafM SNP 0017.scaffold00052 142889 1 C T scaffold301 ScafM SNP 0017.scaffold00052 142899 1 C T scaffold301 ScafM SNP 0017.scaffold00052 142975 1 G A scaffold301 ScafM SNP 0017.scaffold00052 142986 1 C G scaffold301 ReadM SNP 0017.scaffold00052 143045 1 T C - ReadM SNP 0017.scaffold00052 143160 1 T C - ReadM SNP 0017.scaffold00052 143698 1 G C - ReadM SNP 0017.scaffold00052 143786 1 G A - ReadM SNP 0017.scaffold00052 143917 1 A C - ReadM SNP 0017.scaffold00052 144001 1 A G - ReadM SNP 0017.scaffold00052 144054 1 C T - ReadM SNP 0017.scaffold00052 144305 1 C T - ReadM SNP 0017.scaffold00052 144471 1 C T - ReadM SNP 0017.scaffold00052 144600 1 A G - ReadM SNP 0017.scaffold00052 144613 1 G A - ReadM SNP 0017.scaffold00052 144752 1 G A - ReadM SNP 0017.scaffold00052 144893 1 A G - ReadM SNP 0017.scaffold00052 145146 1 A G - ReadM SNP 0017.scaffold00052 145177 1 T C - ReadM SNP 0017.scaffold00052 145356 1 C T - ReadM SNP 0017.scaffold00052 145561 1 G T - ReadM SNP 0017.scaffold00052 145804 1 A G - ReadM SNP 0017.scaffold00052 146205 1 A G - ReadM SNP 0017.scaffold00052 146435 1 C T - ReadM SNP 0017.scaffold00052 146574 1 C T - ReadM SNP 0017.scaffold00052 146936 1 T C - ScafM SNP 0017.scaffold00052 147069 1 C T scaffold825 Both SNP 0017.scaffold00052 147554 1 T C scaffold825 ReadM SNP 0017.scaffold00052 148113 1 A G - ReadM SNP 0017.scaffold00052 148295 1 T C - ReadM SNP 0017.scaffold00052 148365 1 C T - ReadM SNP 0017.scaffold00052 148522 1 C T - Both SNP 0017.scaffold00052 149052 1 C A scaffold825 Both SNP 0017.scaffold00052 149265 1 A G scaffold825 ReadM SNP 0017.scaffold00052 150206 1 T A - ReadM SNP 0017.scaffold00052 150364 1 A G - ReadM SNP 0017.scaffold00052 150442 1 T C - ReadM SNP 0017.scaffold00052 150816 1 T G - ReadM SNP 0017.scaffold00052 150940 1 A G - ReadM SNP 0017.scaffold00052 151147 1 A T - ReadM SNP 0017.scaffold00052 151216 1 G A - ReadM SNP 0017.scaffold00052 151375 1 C T - Both SNP 0017.scaffold00052 151911 1 G T scaffold825 Both SNP 0017.scaffold00052 152010 1 G A scaffold825 Both SNP 0017.scaffold00052 152037 1 T C scaffold825 Both SNP 0017.scaffold00052 152043 1 G C scaffold825 Both SNP 0017.scaffold00052 152270 1 T G scaffold825 Both SNP 0017.scaffold00052 152398 1 A G scaffold825 Both SNP 0017.scaffold00052 152551 1 T G scaffold825 ScafM INDEL 0017.scaffold00052 152628 1 . A scaffold825 ScafM SNP 0017.scaffold00052 152630 1 G A scaffold825 Both SNP 0017.scaffold00052 152670 1 G A scaffold825 Both SNP 0017.scaffold00052 152781 1 A C scaffold825 Both SNP 0017.scaffold00052 152929 1 A T scaffold825 Both SNP 0017.scaffold00052 152943 1 A G scaffold825 Both SNP 0017.scaffold00052 153431 1 A T scaffold825 ReadM SNP 0017.scaffold00052 153774 1 A C - ReadM SNP 0017.scaffold00052 154016 1 C T - ReadM SNP 0017.scaffold00052 154029 1 C T - ReadM SNP 0017.scaffold00052 154083 1 C T - ReadM SNP 0017.scaffold00052 154152 1 C T - ReadM SNP 0017.scaffold00052 154295 1 C A - ReadM SNP 0017.scaffold00052 154364 1 A T - ReadM SNP 0017.scaffold00052 154928 1 T C - ReadM SNP 0017.scaffold00052 155343 1 G A - ReadM SNP 0017.scaffold00052 155640 1 G T - ReadM SNP 0017.scaffold00052 155743 1 T C - ReadM SNP 0017.scaffold00052 156183 1 C G - ReadM SNP 0017.scaffold00052 156361 1 C T - ReadM SNP 0017.scaffold00052 156484 1 T C - ReadM SNP 0017.scaffold00052 156654 1 A G - ReadM SNP 0017.scaffold00052 156889 1 C T - ReadM SNP 0017.scaffold00052 156907 1 G A - ReadM INDEL 0017.scaffold00052 157336 1 . G - ReadM SNP 0017.scaffold00052 157615 1 G A - ReadM SNP 0017.scaffold00052 157920 1 G A - ReadM SNP 0017.scaffold00052 157940 1 G A - ReadM SNP 0017.scaffold00052 157969 1 A G - ReadM SNP 0017.scaffold00052 158258 1 G A - Both SNP 0017.scaffold00052 158518 1 A G scaffold825 Both SNP 0017.scaffold00052 158586 1 G T scaffold825 ReadM SNP 0017.scaffold00052 158691 1 T A - ReadM SNP 0017.scaffold00052 158853 1 T G - ReadM SNP 0017.scaffold00052 158963 1 T G - ReadM SNP 0017.scaffold00052 159134 1 T A - ReadM SNP 0017.scaffold00052 159149 1 A T - ReadM SNP 0017.scaffold00052 159172 1 T A - ReadM SNP 0017.scaffold00052 160554 1 G A - ReadM INDEL 0017.scaffold00052 160995 1 . T - ReadM SNP 0017.scaffold00052 161397 1 G A - ReadM SNP 0017.scaffold00052 161912 1 T A - ReadM SNP 0017.scaffold00052 161940 1 A C - ReadM INDEL 0017.scaffold00052 161956 1 . G - ReadM SNP 0017.scaffold00052 162085 1 C G - ReadM SNP 0017.scaffold00052 162270 1 G C - ScafM SNP 0017.scaffold00052 162988 1 A G scaffold825 ScafM SNP 0017.scaffold00052 163065 1 A G scaffold825 ScafM SNP 0017.scaffold00052 163100 1 C G scaffold825 ReadM SNP 0017.scaffold00052 164865 1 G A - ReadM SNP 0017.scaffold00052 164984 1 A T - ReadM SNP 0017.scaffold00052 164989 1 A G - ReadM SNP 0017.scaffold00052 165158 1 A G - ReadM SNP 0017.scaffold00052 165308 1 T C - ReadM SNP 0017.scaffold00052 165348 1 T C - Both SNP 0017.scaffold00052 165516 1 T G scaffold825 ReadM SNP 0017.scaffold00052 165643 1 A G - ReadM SNP 0017.scaffold00052 165743 1 A G - ReadM INDEL 0017.scaffold00052 165982 1 . A - ReadM SNP 0017.scaffold00052 166264 1 A G - ReadM SNP 0017.scaffold00052 166312 1 G C - ReadM SNP 0017.scaffold00052 166793 1 T C - ReadM SNP 0017.scaffold00052 166883 1 T C - ReadM SNP 0017.scaffold00052 167337 1 A G - ReadM INDEL 0017.scaffold00052 167493 1 G . - ScafM SNP 0017.scaffold00052 167634 2 TT CA scaffold8081 ScafM SNP 0017.scaffold00052 167651 1 A G scaffold8081 ScafM INDEL 0017.scaffold00052 167662 4 TTTG .... scaffold8081 ScafM INDEL 0017.scaffold00052 167670 2 GT .. scaffold8081 ScafM SNP 0017.scaffold00052 167688 1 C G scaffold8081 ScafM INDEL 0017.scaffold00052 167779 1 . T scaffold8081 ScafM SNP 0017.scaffold00052 167790 1 T C scaffold8081 ScafM SNP 0017.scaffold00052 167794 1 G A scaffold8081 ScafM SNP 0017.scaffold00052 167804 1 G T scaffold8081 ScafM SNP 0017.scaffold00052 167813 1 A T scaffold8081 ScafM SNP 0017.scaffold00052 167892 1 A C scaffold8081 ScafM SNP 0017.scaffold00052 167936 1 T C scaffold8081 ScafM SNP 0017.scaffold00052 167940 1 C T scaffold8081 ScafM SNP 0017.scaffold00052 167948 3 ATG GGA scaffold8081 ScafM SNP 0017.scaffold00052 167953 1 T C scaffold8081 ScafM INDEL 0017.scaffold00052 167955 1 . T scaffold8081 ScafM INDEL 0017.scaffold00052 167957 4 .... TTTG scaffold8081 ScafM SNP 0017.scaffold00052 167966 1 C T scaffold8081 ScafM SNP 0017.scaffold00052 167976 1 T C scaffold8081 ScafM SNP 0017.scaffold00052 167985 1 C T scaffold8081 ScafM SNP 0017.scaffold00052 179987 1 G C scaffold14498 ReadM SNP 0017.scaffold00052 183895 1 G A - ReadM SNP 0017.scaffold00052 183899 1 G A - ReadM SNP 0017.scaffold00052 183904 1 A T - ReadM SNP 0017.scaffold00052 184093 1 C T - ReadM SNP 0017.scaffold00052 184113 1 C T - ReadM SNP 0017.scaffold00052 184293 1 C T - ReadM SNP 0017.scaffold00052 184296 1 G T - ReadM SNP 0017.scaffold00052 184322 1 G T - ScafM SNP 0017.scaffold00052 188322 1 G A scaffold292 ScafM SNP 0017.scaffold00052 188347 1 A G scaffold292 ScafM INDEL 0017.scaffold00052 188372 1 . T scaffold292 ScafM INDEL 0017.scaffold00052 188398 1 T . scaffold292 ScafM SNP 0017.scaffold00052 188423 1 A G scaffold292 ScafM SNP 0017.scaffold00052 188426 1 T C scaffold292 ScafM INDEL 0017.scaffold00052 188468 1 . C scaffold292 ScafM SNP 0017.scaffold00052 188495 1 T G scaffold292 ScafM SNP 0017.scaffold00052 188498 1 A G scaffold292 ScafM SNP 0017.scaffold00052 188510 1 C T scaffold292 ReadM SNP 0017.scaffold00052 189070 1 T A - ReadM SNP 0017.scaffold00052 189141 1 C T - ReadM SNP 0017.scaffold00052 189441 1 G A - ScafM SNP 0017.scaffold00052 189929 1 T C scaffold26502 ScafM SNP 0017.scaffold00052 190182 1 G A scaffold26502 Both SNP 0017.scaffold00052 190361 1 G A scaffold26502 Both SNP 0017.scaffold00052 190386 1 G T scaffold26502 Both SNP 0017.scaffold00052 190414 1 A C scaffold26502 ScafM SNP 0017.scaffold00052 190688 1 C T scaffold26502 Both SNP 0017.scaffold00052 190784 1 T C scaffold26502 Both SNP 0017.scaffold00052 190787 1 A G scaffold26502 Both SNP 0017.scaffold00052 190845 1 A G scaffold26502 Both SNP 0017.scaffold00052 191008 1 G T scaffold26502 Both SNP 0017.scaffold00052 191177 1 A G scaffold26502 Both SNP 0017.scaffold00052 191221 1 A G scaffold26502 Both INDEL 0017.scaffold00052 191243 1 . C scaffold26502 Both SNP 0017.scaffold00052 191324 1 A C scaffold26502 Both SNP 0017.scaffold00052 191524 1 C T scaffold26502 Both SNP 0017.scaffold00052 191684 1 A G scaffold26502 Both SNP 0017.scaffold00052 191777 1 T C scaffold26502 Both SNP 0017.scaffold00052 192239 1 T C scaffold26502 Both INDEL 0017.scaffold00052 192393 1 . T scaffold26502 Both SNP 0017.scaffold00052 192450 1 T C scaffold26502 Both SNP 0017.scaffold00052 192511 1 T C scaffold26502 Both INDEL 0017.scaffold00052 192670 1 . A scaffold26502 Both SNP 0017.scaffold00052 193109 1 A G scaffold26502 Both SNP 0017.scaffold00052 193619 1 C A scaffold26502 ScafM INDEL 0017.scaffold00052 193725 2 .. GA scaffold26502 ScafM SNP 0017.scaffold00052 193758 1 T C scaffold26502 ReadM SNP 0017.scaffold00052 204417 1 A G - ReadM SNP 0017.scaffold00052 204453 1 C G - Both INDEL 0017.scaffold00052 204590 3 ... TTA scaffold8899 ScafM SNP 0017.scaffold00052 204730 1 A T scaffold8899 Both SNP 0017.scaffold00052 204987 1 G A scaffold8899 Both SNP 0017.scaffold00052 205380 1 A G scaffold8899 Both INDEL 0017.scaffold00052 205393 1 . T scaffold8899 ReadM SNP 0017.scaffold00052 205986 1 A G - ReadM SNP 0017.scaffold00052 206099 1 T A - ReadM SNP 0017.scaffold00052 206110 1 C T - ReadM INDEL 0017.scaffold00052 206146 1 . C - ReadM SNP 0017.scaffold00052 207480 1 T C - ReadM SNP 0017.scaffold00052 207752 1 T C - ReadM SNP 0017.scaffold00052 207882 1 T C - ReadM SNP 0017.scaffold00052 207940 1 G A - ReadM SNP 0017.scaffold00052 207947 1 A G - ReadM SNP 0017.scaffold00052 209277 1 A T - ScafM SNP 0017.scaffold00052 210968 1 C T scaffold8899 ScafM SNP 0017.scaffold00052 211248 1 T G scaffold8899 ScafM SNP 0017.scaffold00052 211303 1 T C scaffold8899 ScafM INDEL 0017.scaffold00052 211338 1 T . scaffold8899 ScafM INDEL 0017.scaffold00052 211398 1 T . scaffold8899 ScafM SNP 0017.scaffold00052 211433 1 T C scaffold8899 ScafM SNP 0017.scaffold00052 214162 1 C T scaffold8899 ScafM SNP 0017.scaffold00052 214282 1 A T scaffold8899 ScafM SNP 0017.scaffold00052 214304 1 T C scaffold8899 ReadM SNP 0017.scaffold00052 214512 1 C G - ReadM INDEL 0017.scaffold00052 214710 1 . T - ReadM SNP 0017.scaffold00052 215054 1 G A - ReadM INDEL 0017.scaffold00052 215335 1 T . - ReadM SNP 0017.scaffold00052 215495 1 A C - ReadM SNP 0017.scaffold00052 215988 1 G A - ReadM SNP 0017.scaffold00052 216104 1 C T - ReadM SNP 0017.scaffold00052 216288 1 T C - ReadM SNP 0017.scaffold00052 216337 1 T A - ReadM SNP 0017.scaffold00052 216636 1 A C - ScafM SNP 0017.scaffold00052 216760 1 T A scaffold8899 ScafM INDEL 0017.scaffold00052 216883 2 AA .. scaffold8899 ScafM INDEL 0017.scaffold00052 216901 1 . T scaffold8899 ScafM SNP 0017.scaffold00052 216903 1 A T scaffold8899 ScafM SNP 0017.scaffold00052 217040 1 T C scaffold8899 ScafM SNP 0017.scaffold00052 217065 1 G T scaffold8899 ScafM SNP 0017.scaffold00052 217890 1 A G scaffold8899 Both SNP 0017.scaffold00052 218075 1 A T scaffold8899 Both SNP 0017.scaffold00052 218100 1 T C scaffold8899 Both SNP 0017.scaffold00052 218174 1 T G scaffold8899 ReadM SNP 0017.scaffold00052 218334 1 C G - ReadM SNP 0017.scaffold00052 218399 1 A G - ReadM SNP 0017.scaffold00052 218849 1 T C - ReadM SNP 0017.scaffold00052 218862 1 A T - ReadM INDEL 0017.scaffold00052 219018 1 . A - Both SNP 0017.scaffold00052 219416 1 G A scaffold8899 ScafM SNP 0017.scaffold00052 219489 2 GG AA scaffold8899 Both SNP 0017.scaffold00052 219563 1 A G scaffold8899 Both SNP 0017.scaffold00052 220658 1 A G scaffold8899 Both SNP 0017.scaffold00052 221201 1 A T scaffold8899 ReadM SNP 0017.scaffold00052 221494 1 C T - ReadM SNP 0017.scaffold00052 221532 1 C T - ReadM INDEL 0017.scaffold00052 221563 1 . G - ReadM SNP 0017.scaffold00052 221740 1 C T - ScafM SNP 0017.scaffold00052 222333 1 T C scaffold8899 ReadM SNP 0017.scaffold00052 223284 2 GC TA - ReadM SNP 0017.scaffold00052 223325 1 G A - ReadM SNP 0017.scaffold00052 223866 1 C T - ReadM SNP 0017.scaffold00052 224127 1 T C - ReadM SNP 0017.scaffold00052 225226 1 G A - ReadM SNP 0017.scaffold00052 225523 1 T C - Both SNP 0017.scaffold00052 225890 1 A G scaffold8899 ReadM SNP 0017.scaffold00052 226488 1 A C - ReadM SNP 0017.scaffold00052 226563 1 T C - ReadM SNP 0017.scaffold00052 227154 1 C A - ScafM INDEL 0017.scaffold00052 227226 18 .................. CACACAGCCCGCCCGGGC scaffold8899 ScafM SNP 0017.scaffold00052 227254 1 G A scaffold8899 ScafM INDEL 0017.scaffold00052 227309 20 GGGCTCTCCACCGCCCGCCC .................... scaffold8899 ReadM SNP 0017.scaffold00052 227489 1 C G - ScafM SNP 0017.scaffold00052 227985 1 A C scaffold8899 ScafM INDEL 0017.scaffold00052 228194 1 . A scaffold8899 ScafM SNP 0017.scaffold00052 229445 1 G T scaffold8899 ScafM INDEL 0017.scaffold00052 229987 1 . T scaffold8899 ScafM SNP 0017.scaffold00052 230411 1 T A scaffold8899 ReadM SNP 0017.scaffold00052 230871 1 A C - ReadM SNP 0017.scaffold00052 231384 1 A G - ReadM SNP 0017.scaffold00052 231744 1 G A - ReadM SNP 0017.scaffold00052 231996 1 C A - ReadM INDEL 0017.scaffold00052 232103 1 . C - ReadM SNP 0017.scaffold00052 232383 1 A G - ReadM SNP 0017.scaffold00052 232786 1 G A - ReadM SNP 0017.scaffold00052 232897 1 A G - ReadM SNP 0017.scaffold00052 233008 1 G A - ReadM SNP 0017.scaffold00052 233348 1 C T - ReadM SNP 0017.scaffold00052 233351 1 C G - ReadM SNP 0017.scaffold00052 233355 1 A G - ReadM SNP 0017.scaffold00052 233475 1 A T - Both SNP 0017.scaffold00052 233799 1 A C scaffold8899 Both SNP 0017.scaffold00052 233899 1 A G scaffold8899 ReadM SNP 0017.scaffold00052 234270 1 G A - ReadM SNP 0017.scaffold00052 234807 1 T G - ReadM INDEL 0017.scaffold00052 234883 1 . T - Both SNP 0017.scaffold00052 235093 1 G A scaffold8899 Both SNP 0017.scaffold00052 235415 1 C G scaffold8899 Both SNP 0017.scaffold00052 235561 1 C T scaffold8899 Both SNP 0017.scaffold00052 235763 1 A G scaffold8899 Both SNP 0017.scaffold00052 235802 1 G A scaffold8899 Both SNP 0017.scaffold00052 236076 1 A G scaffold8899 Both SNP 0017.scaffold00052 236533 1 T C scaffold8899 ScafM SNP 0017.scaffold00052 236573 2 CA TC scaffold8899 Both SNP 0017.scaffold00052 236695 1 A C scaffold8899 Both INDEL 0017.scaffold00052 236896 1 . A scaffold8899 ReadM SNP 0017.scaffold00052 237095 1 A T - ScafM SNP 0017.scaffold00052 238649 1 T C scaffold9220 ScafM SNP 0017.scaffold00052 238660 1 G T scaffold9220 ReadM SNP 0017.scaffold00052 238948 1 G A - ReadM SNP 0017.scaffold00052 239010 1 T A - ReadM INDEL 0017.scaffold00052 239251 1 A . - ReadM SNP 0017.scaffold00052 239472 1 A C - ReadM SNP 0017.scaffold00052 240567 1 A C - ReadM SNP 0017.scaffold00052 240586 1 T C - ReadM SNP 0017.scaffold00052 241041 1 A G - ReadM SNP 0017.scaffold00052 241384 1 A C - ReadM SNP 0017.scaffold00052 241692 1 C T - Both SNP 0017.scaffold00052 242324 1 G A scaffold8899 ReadM SNP 0017.scaffold00052 242659 1 C T - ReadM SNP 0017.scaffold00052 242698 1 C T - ReadM SNP 0017.scaffold00052 242701 1 A T - ReadM SNP 0017.scaffold00052 242989 1 C T - Both SNP 0017.scaffold00052 243079 1 C A scaffold8899 ReadM SNP 0017.scaffold00052 243164 1 G A - ReadM SNP 0017.scaffold00052 243311 1 A G - ReadM SNP 0017.scaffold00052 243704 1 A G - ReadM SNP 0017.scaffold00052 243718 1 G A - ReadM SNP 0017.scaffold00052 243893 1 T G - ReadM SNP 0017.scaffold00052 244713 1 C G - ReadM SNP 0017.scaffold00052 245199 1 A G - ReadM SNP 0017.scaffold00052 245428 1 T A - ReadM SNP 0017.scaffold00052 245700 1 T C - ReadM INDEL 0017.scaffold00052 245737 1 A . - ReadM SNP 0017.scaffold00052 245858 1 C T - ReadM SNP 0017.scaffold00052 246155 1 C T - ReadM SNP 0017.scaffold00052 246378 1 C G - ReadM SNP 0017.scaffold00052 246434 1 T C - ReadM SNP 0017.scaffold00052 246781 1 G A - ReadM SNP 0017.scaffold00052 246853 1 G T - ReadM SNP 0017.scaffold00052 247401 1 C T - ReadM SNP 0017.scaffold00052 248700 1 C T - ReadM SNP 0017.scaffold00052 248914 1 T C - ReadM SNP 0017.scaffold00052 250771 1 T G - ReadM SNP 0017.scaffold00052 250827 1 A C - ReadM SNP 0017.scaffold00052 250868 1 A G - ReadM SNP 0017.scaffold00052 250945 1 G T - ReadM SNP 0017.scaffold00052 251160 1 C T - ReadM SNP 0017.scaffold00052 251171 1 T C - ReadM INDEL 0017.scaffold00052 251295 1 . T - ReadM SNP 0017.scaffold00052 251447 1 C T - ReadM SNP 0017.scaffold00052 251460 1 G A - ReadM SNP 0017.scaffold00052 251561 1 A G - ReadM SNP 0017.scaffold00052 251575 1 T C - ReadM SNP 0017.scaffold00052 251615 1 A T - ReadM SNP 0017.scaffold00052 251667 1 C A - ReadM SNP 0017.scaffold00052 251878 1 A G - ReadM SNP 0017.scaffold00052 251920 1 A G - ReadM SNP 0017.scaffold00052 252159 1 A G - ReadM SNP 0017.scaffold00052 252169 1 C T - ReadM SNP 0017.scaffold00052 252380 1 C G - ReadM SNP 0017.scaffold00052 252979 1 A T - ReadM SNP 0017.scaffold00052 252989 1 T A - ReadM SNP 0017.scaffold00052 253307 1 G C - ReadM SNP 0017.scaffold00052 253423 1 A C - ReadM SNP 0017.scaffold00052 253619 1 C T - ReadM SNP 0017.scaffold00052 253712 1 T C - ReadM SNP 0017.scaffold00052 253777 1 A G - ReadM SNP 0017.scaffold00052 253921 1 A G - ReadM SNP 0017.scaffold00052 254005 1 G A - ReadM SNP 0017.scaffold00052 254751 1 A G - ReadM SNP 0017.scaffold00052 254789 1 G T - ReadM SNP 0017.scaffold00052 254973 1 G A - ReadM SNP 0017.scaffold00052 255095 1 C T - ReadM SNP 0017.scaffold00052 255137 1 C T - ReadM SNP 0017.scaffold00052 255240 1 C T - ReadM SNP 0017.scaffold00052 255456 1 C G - ReadM SNP 0017.scaffold00052 255492 1 T G - ReadM SNP 0017.scaffold00052 255701 1 A G - ReadM SNP 0017.scaffold00052 255802 1 A C - ReadM SNP 0017.scaffold00052 256371 1 T C - ReadM SNP 0017.scaffold00052 257339 1 T C - ReadM SNP 0017.scaffold00052 257416 1 C T - ReadM SNP 0017.scaffold00052 257541 1 T A - ReadM SNP 0017.scaffold00052 257550 1 C T - ReadM SNP 0017.scaffold00052 258065 1 A G - ReadM SNP 0017.scaffold00052 258686 1 T G - ReadM SNP 0017.scaffold00052 258811 1 A T - ReadM SNP 0017.scaffold00052 270194 1 G A - ReadM SNP 0017.scaffold00052 270413 1 A G - ReadM SNP 0017.scaffold00052 275200 1 G T - ReadM SNP 0017.scaffold00052 275397 1 A T - ScafM SNP 0017.scaffold00052 276283 1 C A scaffold262 Both SNP 0017.scaffold00052 276608 1 G C scaffold262 Both SNP 0017.scaffold00052 276681 1 A G scaffold262 Both SNP 0017.scaffold00052 276692 1 C T scaffold262 ReadM INDEL 0017.scaffold00052 276787 1 T . - ReadM SNP 0017.scaffold00052 277263 1 A C - ReadM SNP 0017.scaffold00052 277355 1 G T - ReadM SNP 0017.scaffold00052 277405 1 C T - ReadM SNP 0017.scaffold00052 277453 1 T C - ReadM SNP 0017.scaffold00052 277681 1 C A - ReadM INDEL 0017.scaffold00052 277846 3 AGT ... - ReadM SNP 0017.scaffold00052 277935 1 A C - ReadM SNP 0017.scaffold00052 278036 1 C A - ReadM SNP 0017.scaffold00052 278120 1 T A - ReadM SNP 0017.scaffold00052 278207 1 C G - ReadM SNP 0017.scaffold00052 278284 1 T C - ReadM SNP 0017.scaffold00052 278400 1 C T - ReadM INDEL 0017.scaffold00052 278721 1 T . - ReadM SNP 0017.scaffold00052 278821 1 C A - ScafM SNP 0017.scaffold00052 280139 1 C T scaffold262 ReadM SNP 0017.scaffold00052 280810 1 C T - ReadM SNP 0017.scaffold00052 280981 1 C G - ReadM SNP 0017.scaffold00052 281051 1 G A - ReadM SNP 0017.scaffold00052 281121 1 G A - ReadM SNP 0017.scaffold00052 281195 1 G T - Both SNP 0017.scaffold00052 281491 2 CA TG scaffold262 ScafM INDEL 0017.scaffold00052 281817 2 .. CC scaffold262 ReadM SNP 0017.scaffold00052 281967 1 A G - ReadM SNP 0017.scaffold00052 283340 1 C T - ReadM SNP 0017.scaffold00052 283534 1 C T - ReadM SNP 0017.scaffold00052 283598 1 A G - ReadM SNP 0017.scaffold00052 283927 1 A G - ReadM SNP 0017.scaffold00052 284231 1 T A - ReadM SNP 0017.scaffold00052 284796 1 T C - ReadM SNP 0017.scaffold00052 284934 1 A G - ReadM SNP 0017.scaffold00052 285029 1 A T - ReadM SNP 0017.scaffold00052 285036 1 C T - ReadM SNP 0017.scaffold00052 285070 1 T C - ReadM SNP 0017.scaffold00052 285080 1 A G - ReadM SNP 0017.scaffold00052 285289 1 G C - ReadM SNP 0017.scaffold00052 285680 1 C A - ReadM SNP 0017.scaffold00052 285821 1 C T - ReadM SNP 0017.scaffold00052 285849 1 G C - ReadM SNP 0017.scaffold00052 285954 1 A T - ReadM INDEL 0017.scaffold00052 285997 1 A . - ReadM SNP 0017.scaffold00052 286042 1 C T - ReadM SNP 0017.scaffold00052 286054 1 C T - ReadM SNP 0017.scaffold00052 286071 1 C T - ReadM SNP 0017.scaffold00052 286137 1 G C - ReadM SNP 0017.scaffold00052 286142 1 T C - ReadM SNP 0017.scaffold00052 286416 1 A G - ReadM INDEL 0017.scaffold00052 286427 1 . C - ReadM SNP 0017.scaffold00052 286863 1 T C - ReadM SNP 0017.scaffold00052 286973 1 C G - ReadM SNP 0017.scaffold00052 287120 1 T C - ReadM SNP 0017.scaffold00052 287513 1 G A - Both SNP 0017.scaffold00052 287724 1 C T scaffold262 Both SNP 0017.scaffold00052 288290 1 G A scaffold262 Both SNP 0017.scaffold00052 288767 1 G A scaffold262 Both SNP 0017.scaffold00052 289645 1 G T scaffold262 Both SNP 0017.scaffold00052 289848 1 T C scaffold262 Both SNP 0017.scaffold00052 290593 1 C T scaffold262 ScafM SNP 0017.scaffold00052 293672 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293678 1 A G scaffold9799 ScafM SNP 0017.scaffold00052 293682 1 C A scaffold9799 ScafM SNP 0017.scaffold00052 293686 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293707 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293721 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293736 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293764 1 T A scaffold9799 ScafM SNP 0017.scaffold00052 293768 1 G A scaffold9799 ScafM SNP 0017.scaffold00052 293783 1 A G scaffold9799 ScafM SNP 0017.scaffold00052 294017 1 G A scaffold262 ReadM SNP 0017.scaffold00052 294679 1 C A - ReadM SNP 0017.scaffold00052 294691 1 C T - ReadM INDEL 0017.scaffold00052 295062 1 . A - ReadM SNP 0017.scaffold00052 295086 1 C T - ReadM INDEL 0017.scaffold00052 295583 1 G . - ReadM SNP 0017.scaffold00052 295886 1 T G - ReadM INDEL 0017.scaffold00052 295914 1 A . - ReadM SNP 0017.scaffold00052 296156 1 G A - ReadM SNP 0017.scaffold00052 296435 1 A G - ReadM SNP 0017.scaffold00052 296459 1 T A - ReadM INDEL 0017.scaffold00052 296523 1 A . - Both SNP 0017.scaffold00052 296658 1 A G scaffold262 Both SNP 0017.scaffold00052 296665 1 G A scaffold262 ScafM SNP 0017.scaffold00052 297087 1 T A scaffold262 ScafM SNP 0017.scaffold00052 297092 1 T G scaffold262 ScafM SNP 0017.scaffold00052 297234 1 T C scaffold262 ReadM SNP 0017.scaffold00052 297835 1 T G - ReadM SNP 0017.scaffold00052 299108 1 T C - ReadM SNP 0017.scaffold00052 299110 1 A G - ReadM SNP 0017.scaffold00052 299117 1 G A - ScafM SNP 0017.scaffold00052 299964 1 T C scaffold262 ReadM SNP 0017.scaffold00052 300937 1 G A - ReadM SNP 0017.scaffold00052 301071 1 G A - ReadM SNP 0017.scaffold00052 301716 1 C T - ReadM SNP 0017.scaffold00052 303719 2 AG TT - ReadM SNP 0017.scaffold00052 304014 1 T A - ReadM SNP 0017.scaffold00052 304019 1 G T - ReadM SNP 0017.scaffold00052 304094 1 A T - ReadM SNP 0017.scaffold00052 304418 1 C T - ReadM SNP 0017.scaffold00052 304908 1 G A - ReadM SNP 0017.scaffold00052 305119 1 C T - ReadM SNP 0017.scaffold00052 305125 1 A G - ReadM SNP 0017.scaffold00052 305313 1 C T - ReadM SNP 0017.scaffold00052 307272 1 T G - ReadM SNP 0017.scaffold00052 307276 1 T C - ScafM SNP 0017.scaffold00052 307681 1 A G scaffold262 ScafM SNP 0017.scaffold00052 307737 1 A G scaffold262 ScafM SNP 0017.scaffold00052 311212 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 311222 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 311235 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 311274 7 ....... ATTTGTT scaffold2818 ScafM SNP 0017.scaffold00052 311301 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 311332 1 T G scaffold2818 ScafM SNP 0017.scaffold00052 311942 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 311979 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 311984 1 . A scaffold2818 ScafM SNP 0017.scaffold00052 311990 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 311998 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 312014 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 312035 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 312053 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 312059 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 312061 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 312067 2 TG .. scaffold2818 ScafM INDEL 0017.scaffold00052 312071 7 TTCCAGC ....... scaffold2818 ScafM INDEL 0017.scaffold00052 312079 2 AT .. scaffold2818 ScafM INDEL 0017.scaffold00052 312082 3 AAC ... scaffold2818 ScafM INDEL 0017.scaffold00052 312088 1 A . scaffold2818 ScafM SNP 0017.scaffold00052 312158 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 312162 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 312178 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 312193 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 312212 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 312228 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 312250 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 312255 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 314083 1 . A scaffold2818 ScafM INDEL 0017.scaffold00052 314093 1 T . scaffold2818 ScafM INDEL 0017.scaffold00052 314096 1 G . scaffold2818 ScafM SNP 0017.scaffold00052 314118 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 314139 2 AG GT scaffold2818 ScafM SNP 0017.scaffold00052 314308 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 314315 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 314326 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 314365 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 314368 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 314388 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 314413 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 314455 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 314459 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 314463 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 314484 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 314487 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 314489 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 314512 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 314526 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 314529 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 314534 4 GTTG TCCA scaffold2818 ScafM SNP 0017.scaffold00052 314555 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 314572 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 314575 1 . T scaffold2818 ScafM SNP 0017.scaffold00052 314578 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 314591 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 314596 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 314600 2 GG AA scaffold2818 ScafM INDEL 0017.scaffold00052 314602 3 ... ATG scaffold2818 ScafM SNP 0017.scaffold00052 314618 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 314677 1 . A scaffold2818 ScafM SNP 0017.scaffold00052 314679 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 314687 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 314692 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 314695 1 . T scaffold2818 ScafM SNP 0017.scaffold00052 315712 1 T A scaffold2818 ScafM INDEL 0017.scaffold00052 315781 1 . A scaffold2818 ScafM INDEL 0017.scaffold00052 315805 2 GC .. scaffold2818 ScafM SNP 0017.scaffold00052 315808 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 315810 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 333353 1 G T scaffold2818 Both SNP 0017.scaffold00052 333403 1 C T scaffold2818 Both SNP 0017.scaffold00052 333491 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 333639 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 333757 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 333790 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 333804 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 333807 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 333817 1 T C scaffold2818 Both SNP 0017.scaffold00052 333929 1 T A scaffold2818 Both SNP 0017.scaffold00052 333992 1 C G scaffold2818 Both SNP 0017.scaffold00052 334104 1 C T scaffold2818 Both SNP 0017.scaffold00052 334128 1 T C scaffold2818 Both SNP 0017.scaffold00052 334183 1 T C scaffold2818 Both SNP 0017.scaffold00052 334215 1 A T scaffold2818 ScafM INDEL 0017.scaffold00052 334297 3 ACT ... scaffold2818 ScafM SNP 0017.scaffold00052 334320 2 TC AT scaffold2818 ScafM SNP 0017.scaffold00052 334374 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 334383 1 A C scaffold2818 ScafM INDEL 0017.scaffold00052 334600 4 .... AAAA scaffold2818 ScafM INDEL 0017.scaffold00052 334602 6 ...... AAAAAG scaffold2818 ScafM INDEL 0017.scaffold00052 334603 2 .. AA scaffold2818 Both SNP 0017.scaffold00052 334650 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 334654 1 A T scaffold2818 Both SNP 0017.scaffold00052 334720 1 A G scaffold2818 Both SNP 0017.scaffold00052 334756 1 C T scaffold2818 Both SNP 0017.scaffold00052 334793 1 A C scaffold2818 Both SNP 0017.scaffold00052 334801 1 A G scaffold2818 Both SNP 0017.scaffold00052 334847 1 C T scaffold2818 ReadM INDEL 0017.scaffold00052 334870 1 . T - ScafM INDEL 0017.scaffold00052 334870 2 .C TT scaffold2818 Both INDEL 0017.scaffold00052 334984 1 . A scaffold2818 Both SNP 0017.scaffold00052 335031 1 G A scaffold2818 Both SNP 0017.scaffold00052 335043 1 G T scaffold2818 Both SNP 0017.scaffold00052 335251 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 335370 4 .... TATG scaffold2818 ScafM SNP 0017.scaffold00052 335461 2 TG AA scaffold2818 Both SNP 0017.scaffold00052 335508 1 C T scaffold2818 Both SNP 0017.scaffold00052 335555 1 A T scaffold2818 Both SNP 0017.scaffold00052 335558 1 G A scaffold2818 Both SNP 0017.scaffold00052 335662 1 C G scaffold2818 Both SNP 0017.scaffold00052 335927 1 A G scaffold2818 Both SNP 0017.scaffold00052 335992 1 G C scaffold2818 Both SNP 0017.scaffold00052 336177 1 G A scaffold2818 Both SNP 0017.scaffold00052 336348 1 G A scaffold2818 Both SNP 0017.scaffold00052 336516 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 336545 4 ACAA .... scaffold2818 ScafM INDEL 0017.scaffold00052 336554 1 C . scaffold2818 ScafM SNP 0017.scaffold00052 336651 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 336670 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 336697 2 CC TT scaffold2818 ScafM SNP 0017.scaffold00052 336910 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 336920 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 337769 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 337783 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 337833 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 337898 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 337922 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 337997 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 338011 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 338027 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 338035 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 338073 7 ....... TAGTTCA scaffold2818 ScafM SNP 0017.scaffold00052 338128 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 338148 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 338167 2 CA TT scaffold2818 ScafM SNP 0017.scaffold00052 338190 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338254 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 338296 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 338300 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 338306 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338310 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338312 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338318 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 338331 3 TTT AAC scaffold2818 ScafM SNP 0017.scaffold00052 338346 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338354 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 338361 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 338397 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338415 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 338447 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 338450 1 T A scaffold2818 ScafM INDEL 0017.scaffold00052 338981 2 .. AA scaffold2818 ScafM SNP 0017.scaffold00052 339009 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 339033 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 339050 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 339078 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 339092 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 339108 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 339117 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 339125 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 339164 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 339182 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 339207 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 339212 3 GAG ..T scaffold2818 ScafM INDEL 0017.scaffold00052 339238 4 TTCA .... scaffold2818 ScafM INDEL 0017.scaffold00052 339261 16 ACCCATGCATAATTTA ................ scaffold2818 ScafM INDEL 0017.scaffold00052 339284 11 GCACCAACCAA ........... scaffold2818 ScafM SNP 0017.scaffold00052 339310 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 339341 2 AA GT scaffold2818 ScafM SNP 0017.scaffold00052 339346 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 339349 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 339382 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 339394 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 339406 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 339413 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 339458 1 T G scaffold2818 ScafM SNP 0017.scaffold00052 339478 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 339498 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 339796 1 G C scaffold2818 Both SNP 0017.scaffold00052 343269 1 T G scaffold2818 ScafM SNP 0017.scaffold00052 343332 1 T C scaffold2818 ReadM SNP 0017.scaffold00052 343542 1 A G - ScafM SNP 0017.scaffold00052 344346 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 344512 1 G A scaffold2818 Both SNP 0017.scaffold00052 344841 1 A G scaffold2818 Both SNP 0017.scaffold00052 344844 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 344949 1 A C scaffold2818 ScafM INDEL 0017.scaffold00052 345093 3 TCC ... scaffold2818 ScafM SNP 0017.scaffold00052 345152 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 346041 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 346906 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 347042 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 347047 1 C G scaffold2818 Both SNP 0017.scaffold00052 347468 1 T C scaffold2818 Both INDEL 0017.scaffold00052 347492 1 A . scaffold2818 ScafM SNP 0017.scaffold00052 347501 1 G T scaffold2818 Both SNP 0017.scaffold00052 347522 1 T C scaffold2818 Both SNP 0017.scaffold00052 347623 1 C A scaffold2818 Both SNP 0017.scaffold00052 347668 1 C G scaffold2818 Both SNP 0017.scaffold00052 347693 1 C T scaffold2818 Both SNP 0017.scaffold00052 347735 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 347773 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 347779 1 C A scaffold2818 ScafM INDEL 0017.scaffold00052 347792 7 ....... TAAAATC scaffold2818 ScafM SNP 0017.scaffold00052 347828 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 347842 1 A T scaffold2818 ScafM INDEL 0017.scaffold00052 347867 7 ....... GCAAACA scaffold2818 ReadM SNP 0017.scaffold00052 347868 1 T C - ScafM INDEL 0017.scaffold00052 347868 7 ....... AAGCACC scaffold2818 Both SNP 0017.scaffold00052 347922 1 A C scaffold2818 Both SNP 0017.scaffold00052 347962 1 A T scaffold2818 Both SNP 0017.scaffold00052 347969 1 A G scaffold2818 Both SNP 0017.scaffold00052 347990 1 A G scaffold2818 Both SNP 0017.scaffold00052 348018 1 C G scaffold2818 Both SNP 0017.scaffold00052 348029 1 C A scaffold2818 Both SNP 0017.scaffold00052 348111 1 G T scaffold2818 Both SNP 0017.scaffold00052 348142 1 T C scaffold2818 Both SNP 0017.scaffold00052 348159 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 348198 2 TA AG scaffold2818 ScafM SNP 0017.scaffold00052 348226 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 348257 1 . T scaffold2818 ScafM SNP 0017.scaffold00052 348274 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 348293 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 348314 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 348342 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 348352 1 G A scaffold2818 ReadM SNP 0017.scaffold00052 348401 1 G C - ReadM SNP 0017.scaffold00052 348463 1 G A - ScafM SNP 0017.scaffold00052 348538 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 348542 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 348552 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 348555 1 A G scaffold2818 Both SNP 0017.scaffold00052 348568 1 T C scaffold2818 ReadM SNP 0017.scaffold00052 348641 1 T A - ReadM SNP 0017.scaffold00052 348658 1 A G - Both SNP 0017.scaffold00052 348736 1 T C scaffold2818 Both SNP 0017.scaffold00052 348757 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 348798 1 C T scaffold2818 Both INDEL 0017.scaffold00052 348846 1 . A scaffold2818 Both SNP 0017.scaffold00052 348897 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 348969 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 348972 1 C T scaffold2818 Both SNP 0017.scaffold00052 349035 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 349047 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 349049 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 349068 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 349074 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 349248 1 C A scaffold2818 Both SNP 0017.scaffold00052 349315 1 A G scaffold2818 Both SNP 0017.scaffold00052 349333 1 T A scaffold2818 Both INDEL 0017.scaffold00052 349354 1 . A scaffold2818 Both SNP 0017.scaffold00052 349412 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 349419 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 349422 1 G A scaffold2818 Both SNP 0017.scaffold00052 349499 1 C T scaffold2818 Both INDEL 0017.scaffold00052 349528 1 . A scaffold2818 Both SNP 0017.scaffold00052 349539 1 C T scaffold2818 Both SNP 0017.scaffold00052 349574 1 G C scaffold2818 Both SNP 0017.scaffold00052 349650 1 A G scaffold2818 Both SNP 0017.scaffold00052 349674 1 C G scaffold2818 ScafM INDEL 0017.scaffold00052 349683 3 AGT ... scaffold2818 ScafM INDEL 0017.scaffold00052 349688 3 ATG ... scaffold2818 ScafM INDEL 0017.scaffold00052 349692 2 CA .. scaffold2818 ScafM SNP 0017.scaffold00052 349725 1 A T scaffold2818 ScafM INDEL 0017.scaffold00052 349749 2 .. AA scaffold2818 ScafM INDEL 0017.scaffold00052 349763 2 .. TA scaffold2818 ScafM SNP 0017.scaffold00052 349797 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 349803 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 349820 2 .G TT scaffold2818 ScafM SNP 0017.scaffold00052 349831 2 AA GT scaffold2818 Both SNP 0017.scaffold00052 349855 1 G A scaffold2818 Both SNP 0017.scaffold00052 349868 1 G A scaffold2818 Both SNP 0017.scaffold00052 349946 1 G A scaffold2818 Both INDEL 0017.scaffold00052 349964 1 G . scaffold2818 ScafM SNP 0017.scaffold00052 349969 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 349995 1 A G scaffold2818 ScafM INDEL 0017.scaffold00052 350019 2 .. AC scaffold2818 ScafM SNP 0017.scaffold00052 350021 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 350025 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350041 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350067 1 T A scaffold2818 Both SNP 0017.scaffold00052 350125 1 G A scaffold2818 Both SNP 0017.scaffold00052 350127 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 350246 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 350260 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350264 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 350273 2 GG AA scaffold2818 ScafM INDEL 0017.scaffold00052 350275 9 ......... AAATACTAG scaffold2818 ScafM SNP 0017.scaffold00052 350282 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350300 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 350308 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 350320 1 C A scaffold2818 ScafM INDEL 0017.scaffold00052 350322 2 .. AT scaffold2818 ScafM SNP 0017.scaffold00052 350340 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 350373 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350381 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 350385 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 350432 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 350461 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 350464 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 350481 3 ... ATT scaffold2818 Both SNP 0017.scaffold00052 350517 1 A T scaffold2818 Both SNP 0017.scaffold00052 350555 1 C A scaffold2818 Both SNP 0017.scaffold00052 350614 1 G A scaffold2818 Both SNP 0017.scaffold00052 350654 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 350669 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 350673 1 A C scaffold2818 Both SNP 0017.scaffold00052 350722 1 C T scaffold2818 Both INDEL 0017.scaffold00052 350750 1 A . scaffold2818 Both SNP 0017.scaffold00052 350878 1 G A scaffold2818 Both SNP 0017.scaffold00052 351000 1 G T scaffold2818 Both SNP 0017.scaffold00052 351021 1 A G scaffold2818 Both SNP 0017.scaffold00052 351050 1 G A scaffold2818 Both SNP 0017.scaffold00052 351074 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 351131 1 A G scaffold2818 ScafM INDEL 0017.scaffold00052 351141 5 ..... TCAAG scaffold2818 Both SNP 0017.scaffold00052 351168 1 A T scaffold2818 Both SNP 0017.scaffold00052 351204 1 T C scaffold2818 Both SNP 0017.scaffold00052 351246 1 C T scaffold2818 Both SNP 0017.scaffold00052 351266 1 G A scaffold2818 Both SNP 0017.scaffold00052 351296 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 351337 14 .............. AACATTGACCATTG scaffold2818 ScafM INDEL 0017.scaffold00052 351387 7 GCCCACT ....... scaffold2818 ScafM SNP 0017.scaffold00052 351398 1 C G scaffold2818 Both SNP 0017.scaffold00052 351422 1 A G scaffold2818 Both SNP 0017.scaffold00052 351487 1 A G scaffold2818 Both SNP 0017.scaffold00052 351527 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 351547 2 AT GA scaffold2818 ScafM SNP 0017.scaffold00052 351554 1 G C scaffold2818 ScafM SNP 0017.scaffold00052 351569 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 351591 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 351599 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 351608 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 351616 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 351642 1 C T scaffold2818 Both SNP 0017.scaffold00052 351718 1 T C scaffold2818 Both SNP 0017.scaffold00052 351731 1 G C scaffold2818 Both SNP 0017.scaffold00052 351773 1 A G scaffold2818 Both SNP 0017.scaffold00052 351864 1 A G scaffold2818 Both SNP 0017.scaffold00052 351866 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 351882 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 351887 1 C T scaffold2818 ScafM INDEL 0017.scaffold00052 351910 3 ... TCT scaffold2818 ScafM SNP 0017.scaffold00052 351944 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 351951 1 G T scaffold2818 ScafM INDEL 0017.scaffold00052 351974 34 GCACCTCGTATAGAGATCCATTTATCGTTTTGAA .................................. scaffold2818 ScafM INDEL 0017.scaffold00052 352010 2 TT .. scaffold2818 ScafM INDEL 0017.scaffold00052 352016 7 AGAACCT ....... scaffold2818 ScafM SNP 0017.scaffold00052 352027 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 352040 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 352050 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 352061 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 352076 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 352104 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 352120 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 352126 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 352186 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 352217 1 A T scaffold2818 ScafM INDEL 0017.scaffold00052 352227 1 A . scaffold2818 ScafM SNP 0017.scaffold00052 352229 1 T G scaffold2818 ScafM SNP 0017.scaffold00052 352272 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 352301 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 352304 1 A T scaffold2818 Both SNP 0017.scaffold00052 352312 1 G A scaffold2818 Both SNP 0017.scaffold00052 352347 1 G A scaffold2818 Both SNP 0017.scaffold00052 352419 1 T A scaffold2818 ScafM SNP 0017.scaffold00052 352446 1 A T scaffold2818 Both SNP 0017.scaffold00052 352452 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 352465 1 T A scaffold2818 Both SNP 0017.scaffold00052 352501 1 C A scaffold2818 Both SNP 0017.scaffold00052 352583 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 352619 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 352621 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 352634 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 352639 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 352641 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 352666 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 352708 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 352723 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 352732 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 352749 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 352807 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 352809 1 C A scaffold2818 Both INDEL 0017.scaffold00052 352835 1 A . scaffold2818 ScafM SNP 0017.scaffold00052 352837 1 C T scaffold2818 Both SNP 0017.scaffold00052 352852 1 A T scaffold2818 Both SNP 0017.scaffold00052 353073 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 353222 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 353232 2 TT AA scaffold2818 ScafM SNP 0017.scaffold00052 353246 1 A T scaffold2818 Both SNP 0017.scaffold00052 353274 1 G A scaffold2818 Both SNP 0017.scaffold00052 353325 1 A G scaffold2818 Both SNP 0017.scaffold00052 353327 1 A T scaffold2818 Both SNP 0017.scaffold00052 353365 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 353396 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 353402 1 A C scaffold2818 ScafM SNP 0017.scaffold00052 353424 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 353431 1 A G scaffold2818 Both SNP 0017.scaffold00052 353454 1 A G scaffold2818 Both SNP 0017.scaffold00052 353502 1 A T scaffold2818 Both SNP 0017.scaffold00052 353534 1 G A scaffold2818 Both SNP 0017.scaffold00052 353560 1 A C scaffold2818 Both SNP 0017.scaffold00052 353656 1 G A scaffold2818 ReadM SNP 0017.scaffold00052 353790 1 C T - Both SNP 0017.scaffold00052 353863 1 C T scaffold2818 Both SNP 0017.scaffold00052 353869 1 C G scaffold2818 ScafM SNP 0017.scaffold00052 353890 1 T C scaffold2818 ScafM SNP 0017.scaffold00052 353899 1 G C scaffold2818 ScafM INDEL 0017.scaffold00052 353910 3 CAA ... scaffold2818 ReadM SNP 0017.scaffold00052 353995 1 T C - ReadM SNP 0017.scaffold00052 354021 1 C G - ReadM SNP 0017.scaffold00052 354075 1 A G - ScafM SNP 0017.scaffold00052 354314 1 C G scaffold2818 ScafM INDEL 0017.scaffold00052 354320 1 . T scaffold2818 ScafM SNP 0017.scaffold00052 354324 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 354351 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 354360 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 354509 1 T G scaffold2818 ScafM SNP 0017.scaffold00052 354586 1 A T scaffold2818 ScafM SNP 0017.scaffold00052 354618 1 T C scaffold2818 ScafM INDEL 0017.scaffold00052 354631 1 . A scaffold2818 ScafM INDEL 0017.scaffold00052 354633 2 .. TT scaffold2818 ScafM INDEL 0017.scaffold00052 354648 2 .T CC scaffold2818 ScafM SNP 0017.scaffold00052 371558 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 371565 1 G A scaffold2818 ScafM INDEL 0017.scaffold00052 371572 1 T . scaffold2818 ScafM INDEL 0017.scaffold00052 371603 4 .... ATAT scaffold2818 ScafM SNP 0017.scaffold00052 371605 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 371611 1 C A scaffold2818 ScafM SNP 0017.scaffold00052 371635 1 A G scaffold2818 ScafM SNP 0017.scaffold00052 371661 1 G A scaffold2818 ScafM SNP 0017.scaffold00052 371672 1 G T scaffold2818 ScafM SNP 0017.scaffold00052 371674 1 C T scaffold2818 ScafM SNP 0017.scaffold00052 375684 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 376678 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 376689 2 GA TT scaffold3495 ScafM SNP 0017.scaffold00052 376709 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 376716 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 376761 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 376767 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 376770 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 376832 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 376865 1 C T scaffold3495 ScafM INDEL 0017.scaffold00052 376886 3 ... ACT scaffold3495 ScafM SNP 0017.scaffold00052 376895 1 G T scaffold3495 ScafM SNP 0017.scaffold00052 376919 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 377073 1 A G scaffold4537 ScafM SNP 0017.scaffold00052 384432 1 T G scaffold4925 ScafM SNP 0017.scaffold00052 384747 1 C T scaffold4925 ScafM SNP 0017.scaffold00052 384766 1 T A scaffold4925 ScafM SNP 0017.scaffold00052 384770 1 G C scaffold4925 ScafM SNP 0017.scaffold00052 384805 2 TC CG scaffold4925 ScafM SNP 0017.scaffold00052 384828 1 A G scaffold4925 ScafM SNP 0017.scaffold00052 395682 1 T G scaffold3495 ScafM SNP 0017.scaffold00052 395686 1 T G scaffold3495 ScafM SNP 0017.scaffold00052 395718 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 395720 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 395729 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 395760 1 A T scaffold3495 ScafM SNP 0017.scaffold00052 395776 1 C T scaffold3495 ScafM INDEL 0017.scaffold00052 395784 7 AAGATAA ....... scaffold3495 ScafM INDEL 0017.scaffold00052 395793 5 AATTA ..... scaffold3495 ScafM SNP 0017.scaffold00052 395811 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 395830 1 C G scaffold3495 ScafM SNP 0017.scaffold00052 395846 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 396220 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 396255 1 G T scaffold3495 ScafM SNP 0017.scaffold00052 396303 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 396328 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 396347 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 396351 1 A T scaffold3495 ScafM SNP 0017.scaffold00052 396355 1 A T scaffold3495 ScafM INDEL 0017.scaffold00052 396371 5 TAGAG ..... scaffold3495 ScafM SNP 0017.scaffold00052 396397 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 396403 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 396406 1 G C scaffold3495 ScafM SNP 0017.scaffold00052 396410 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 396440 1 A T scaffold3495 ScafM SNP 0017.scaffold00052 396506 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 396977 1 C G scaffold3495 ScafM SNP 0017.scaffold00052 396987 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 396989 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 396992 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397009 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397038 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397042 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397052 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397062 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397071 1 C G scaffold3495 ScafM SNP 0017.scaffold00052 397088 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397095 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397112 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397120 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397125 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397340 1 A G scaffold3495 ScafM INDEL 0017.scaffold00052 397354 1 . A scaffold3495 ScafM SNP 0017.scaffold00052 397365 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397379 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 397381 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397392 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397398 1 T G scaffold3495 ScafM SNP 0017.scaffold00052 397401 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 397418 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397420 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397469 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397474 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 397495 1 G C scaffold3495 ScafM SNP 0017.scaffold00052 397499 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397507 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397524 1 G C scaffold3495 ScafM SNP 0017.scaffold00052 397528 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397567 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 397572 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397577 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397582 1 C G scaffold3495 ScafM SNP 0017.scaffold00052 397587 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397611 3 TCC GTT scaffold3495 ScafM INDEL 0017.scaffold00052 397626 6 ...... TCAAAC scaffold3495 ScafM SNP 0017.scaffold00052 397629 1 G T scaffold3495 ScafM SNP 0017.scaffold00052 397651 1 T G scaffold3495 ScafM INDEL 0017.scaffold00052 397654 1 C . scaffold3495 ScafM SNP 0017.scaffold00052 397667 1 T A scaffold3495 ScafM SNP 0017.scaffold00052 397671 1 A T scaffold3495 ScafM SNP 0017.scaffold00052 397696 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397701 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397727 2 AA GG scaffold3495 ScafM SNP 0017.scaffold00052 397738 2 TT CC scaffold3495 ScafM SNP 0017.scaffold00052 397750 2 GT AA scaffold3495 ScafM SNP 0017.scaffold00052 397757 1 G T scaffold3495 ScafM SNP 0017.scaffold00052 397778 2 TT AG scaffold3495 ScafM SNP 0017.scaffold00052 397796 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397799 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 397835 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 397858 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397934 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 397937 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 397979 1 A T scaffold3495 ScafM INDEL 0017.scaffold00052 398030 1 A . scaffold3495 ScafM SNP 0017.scaffold00052 398083 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 398088 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 398096 1 A T scaffold3495 ScafM SNP 0017.scaffold00052 398098 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 398137 1 C A scaffold3495 ScafM SNP 0017.scaffold00052 398154 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 398161 1 T A scaffold3495 ScafM SNP 0017.scaffold00052 398176 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 398205 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 398210 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 398217 1 G T scaffold3495 ScafM SNP 0017.scaffold00052 398227 1 T A scaffold3495 ScafM SNP 0017.scaffold00052 398233 1 A G scaffold3495 ScafM SNP 0017.scaffold00052 398242 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 398258 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 398292 1 T G scaffold3495 ScafM SNP 0017.scaffold00052 398296 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 398302 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 398311 1 A C scaffold3495 ScafM SNP 0017.scaffold00052 398329 1 C T scaffold3495 ScafM SNP 0017.scaffold00052 398338 1 T C scaffold3495 ScafM INDEL 0017.scaffold00052 398359 5 ..... ACCTA scaffold3495 ScafM SNP 0017.scaffold00052 398362 1 T C scaffold3495 ScafM SNP 0017.scaffold00052 398366 1 G A scaffold3495 ScafM SNP 0017.scaffold00052 398368 1 T G scaffold3495 ScafM SNP 0017.scaffold00052 398390 1 A C scaffold3495 ScafM INDEL 0017.scaffold00052 398395 1 C . scaffold3495 ScafM SNP 0017.scaffold00052 398406 1 T A scaffold3495 ScafM SNP 0017.scaffold00052 398854 2 AG GT scaffold13175 ScafM SNP 0017.scaffold00052 398867 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 398898 1 A C scaffold13175 ScafM INDEL 0017.scaffold00052 398907 7 AAAAGTG ....... scaffold13175 ScafM SNP 0017.scaffold00052 398927 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 398963 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 398998 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 399016 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 399089 1 T C scaffold13175 Both SNP 0017.scaffold00052 399149 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 399227 1 C A scaffold13175 ScafM INDEL 0017.scaffold00052 399275 42 .......................................... AGTATAACCCCAGCATATATTCTTCAAAATTGTTGTTATTTG scaffold13175 ScafM SNP 0017.scaffold00052 399294 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 399330 2 .. TT scaffold13175 ScafM SNP 0017.scaffold00052 399355 1 T G scaffold13175 ScafM INDEL 0017.scaffold00052 399371 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 399429 1 A T scaffold13175 Both SNP 0017.scaffold00052 399470 1 T A scaffold13175 Both SNP 0017.scaffold00052 399506 1 T G scaffold13175 Both SNP 0017.scaffold00052 399515 1 A T scaffold13175 Both SNP 0017.scaffold00052 399536 1 C T scaffold13175 Both INDEL 0017.scaffold00052 399621 2 .. AT scaffold13175 ScafM SNP 0017.scaffold00052 399663 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 399674 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 399694 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 399702 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 399729 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 399750 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 399783 4 .... TAAT scaffold13175 ScafM INDEL 0017.scaffold00052 399784 2 .. AT scaffold13175 ScafM INDEL 0017.scaffold00052 399786 11 ........... ACATCTATCTA scaffold13175 Both SNP 0017.scaffold00052 399876 1 T C scaffold13175 Both SNP 0017.scaffold00052 399941 1 A G scaffold13175 Both SNP 0017.scaffold00052 399956 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 399984 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 399997 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400005 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400018 1 T G scaffold13175 ScafM INDEL 0017.scaffold00052 400021 1 C . scaffold13175 ScafM SNP 0017.scaffold00052 400025 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400031 1 A T scaffold13175 Both SNP 0017.scaffold00052 400057 1 G C scaffold13175 Both SNP 0017.scaffold00052 400131 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 400159 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400168 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400222 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 400224 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 400248 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400281 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 400292 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 400296 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 400301 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400348 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 400362 2 AC GG scaffold13175 ScafM SNP 0017.scaffold00052 400365 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 400367 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400373 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400384 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400398 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 400410 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 400421 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 400439 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400456 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400471 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 400486 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400497 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 400508 2 AT GC scaffold13175 ScafM SNP 0017.scaffold00052 400532 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400544 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 400552 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400575 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 400591 2 TA CG scaffold13175 ScafM SNP 0017.scaffold00052 400598 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400614 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 400621 2 CA TG scaffold13175 ScafM SNP 0017.scaffold00052 400639 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 400647 2 CA TG scaffold13175 ScafM SNP 0017.scaffold00052 400660 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 400667 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400689 2 TG GT scaffold13175 ScafM SNP 0017.scaffold00052 400699 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 400739 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400748 2 TT AC scaffold13175 ScafM SNP 0017.scaffold00052 400758 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400760 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 400779 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 400783 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 400789 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400818 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 400828 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 400852 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400875 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 400917 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400935 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 400954 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400961 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 400968 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 400981 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 401019 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 401026 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 401057 1 A G scaffold13175 ScafM INDEL 0017.scaffold00052 401097 1 T . scaffold13175 ScafM INDEL 0017.scaffold00052 401104 1 A . scaffold13175 ScafM INDEL 0017.scaffold00052 401106 2 TA .. scaffold13175 ScafM SNP 0017.scaffold00052 401111 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 401135 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 401163 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401168 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401187 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401197 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 401204 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 401218 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401221 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401232 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 401290 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 401327 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 401356 2 TC GA scaffold13175 ScafM SNP 0017.scaffold00052 401376 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401407 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401410 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 401415 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 401417 2 GG CA scaffold13175 ScafM SNP 0017.scaffold00052 401425 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 401438 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 401452 2 AA GT scaffold13175 ScafM SNP 0017.scaffold00052 401461 3 TTC GCT scaffold13175 ScafM SNP 0017.scaffold00052 401467 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401536 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 401538 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 401541 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 401563 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 401589 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 401596 2 TG CA scaffold13175 ScafM SNP 0017.scaffold00052 401620 1 C A scaffold13175 ScafM INDEL 0017.scaffold00052 401651 2 AT .G scaffold13175 ScafM SNP 0017.scaffold00052 401684 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401694 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 401699 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 401712 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 401718 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 401720 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 401758 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401790 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401816 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 401820 1 A G scaffold13175 ScafM INDEL 0017.scaffold00052 401826 7 ....... TTTCAAA scaffold13175 ScafM SNP 0017.scaffold00052 401858 2 CC GT scaffold13175 ScafM SNP 0017.scaffold00052 401868 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 401891 1 T A scaffold13175 ScafM INDEL 0017.scaffold00052 401899 18 .................. AGGCGAGTTATGTCTCAA scaffold13175 ScafM SNP 0017.scaffold00052 401924 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402165 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 402173 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 402221 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 402238 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 402253 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 402258 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 402260 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 402281 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402283 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 402292 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 402301 16 ................ ATTTAGCAGTTGGAAT scaffold13175 ScafM SNP 0017.scaffold00052 402322 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402324 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 402335 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 402354 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 402362 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402389 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 402395 2 .A TT scaffold13175 ScafM SNP 0017.scaffold00052 402398 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 402403 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 402420 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402426 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 402442 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 402456 2 TT GC scaffold13175 ScafM SNP 0017.scaffold00052 402463 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 402493 2 .. TA scaffold13175 ScafM SNP 0017.scaffold00052 402494 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 402507 1 G T scaffold13175 ScafM INDEL 0017.scaffold00052 402513 2 .T CG scaffold13175 ScafM SNP 0017.scaffold00052 402533 2 TT CC scaffold13175 ScafM SNP 0017.scaffold00052 402537 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 402556 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 402562 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 402569 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 402580 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 402591 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 402604 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402640 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 402668 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 402699 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 402705 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 402717 2 GC AG scaffold13175 ScafM SNP 0017.scaffold00052 402730 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 403131 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 403147 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 403178 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 403185 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 403201 2 TA CT scaffold13175 ScafM SNP 0017.scaffold00052 403238 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 403249 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 403290 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 403312 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 403315 2 TC CA scaffold13175 ScafM INDEL 0017.scaffold00052 404129 2 AA .. scaffold13175 ScafM INDEL 0017.scaffold00052 404132 1 A . scaffold13175 ScafM INDEL 0017.scaffold00052 404135 13 AACCTCTGAGGTG ............. scaffold13175 ScafM SNP 0017.scaffold00052 404152 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 404165 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 404178 1 A C scaffold13175 ScafM INDEL 0017.scaffold00052 404183 1 . T scaffold13175 ScafM INDEL 0017.scaffold00052 404227 1 C . scaffold13175 ScafM INDEL 0017.scaffold00052 405768 1 . A scaffold13175 ScafM SNP 0017.scaffold00052 405776 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 405785 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 405817 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 405823 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 405826 1 T A scaffold13175 ScafM INDEL 0017.scaffold00052 405835 1 G . scaffold13175 ScafM SNP 0017.scaffold00052 405842 1 G C scaffold13175 ScafM INDEL 0017.scaffold00052 405844 4 GATG .... scaffold13175 ScafM SNP 0017.scaffold00052 405891 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 405915 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 405949 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 405993 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 406010 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406015 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406023 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 406028 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 406130 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406146 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 406217 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 406252 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 406256 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 406267 2 TG CC scaffold13175 ScafM SNP 0017.scaffold00052 406271 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 406284 2 TA CC scaffold13175 ScafM SNP 0017.scaffold00052 406295 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 406310 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 406313 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 406331 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406342 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406614 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 406653 3 ... TTT scaffold13175 ScafM SNP 0017.scaffold00052 406655 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 406668 1 T G scaffold13175 ScafM INDEL 0017.scaffold00052 406689 8 ........ ACTTCACC scaffold13175 ScafM SNP 0017.scaffold00052 406705 1 G T scaffold13175 ScafM INDEL 0017.scaffold00052 406756 3 CAC ... scaffold13175 ScafM SNP 0017.scaffold00052 406792 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 406816 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 406836 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 406877 6 GAAATC ...... scaffold13175 ScafM SNP 0017.scaffold00052 406887 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406903 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 406928 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 406946 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 406956 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 406968 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 406978 1 A C scaffold13175 ScafM INDEL 0017.scaffold00052 407008 2 .. AT scaffold13175 ScafM SNP 0017.scaffold00052 407010 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 407032 1 . C scaffold13175 ScafM SNP 0017.scaffold00052 407035 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 407054 2 TT AC scaffold13175 ScafM SNP 0017.scaffold00052 407066 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 407094 2 .T GA scaffold13175 ScafM SNP 0017.scaffold00052 407105 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 407111 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407145 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 407151 1 G . scaffold13175 ScafM SNP 0017.scaffold00052 407277 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407280 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407290 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 407299 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407308 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407337 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 407394 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 407415 2 TG CA scaffold13175 ScafM SNP 0017.scaffold00052 407429 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 407462 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 407465 1 A . scaffold13175 ScafM SNP 0017.scaffold00052 407469 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407491 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 407505 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 407507 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 407514 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 407517 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 407562 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 407577 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 407592 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 407595 5 CTCAA AGAGG scaffold13175 ScafM SNP 0017.scaffold00052 407608 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 407612 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 407623 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 407626 1 A G scaffold13175 Both SNP 0017.scaffold00052 407686 1 A G scaffold13175 Both SNP 0017.scaffold00052 407696 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 407807 11 TGTTTTTTTTT ........... scaffold13175 ScafM SNP 0017.scaffold00052 407824 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 407828 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 407843 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 407881 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 407929 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 407950 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 407952 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 407963 1 . G scaffold13175 ScafM SNP 0017.scaffold00052 407995 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 408006 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 408020 1 C T scaffold13175 ReadM INDEL 0017.scaffold00052 408278 1 . T - ReadM SNP 0017.scaffold00052 408320 1 C T - ScafM SNP 0017.scaffold00052 408362 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 408383 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 408398 1 A . scaffold13175 ScafM SNP 0017.scaffold00052 408407 2 GA AG scaffold13175 ScafM SNP 0017.scaffold00052 408442 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 408477 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 408489 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 408498 1 C T scaffold13175 ReadM SNP 0017.scaffold00052 408708 1 T C - ReadM SNP 0017.scaffold00052 408754 1 C T - ReadM SNP 0017.scaffold00052 408796 1 C G - ReadM SNP 0017.scaffold00052 409122 1 A G - ReadM SNP 0017.scaffold00052 409156 1 A G - ReadM SNP 0017.scaffold00052 409253 1 C T - ReadM SNP 0017.scaffold00052 409279 1 T C - ReadM SNP 0017.scaffold00052 409310 1 T G - ReadM SNP 0017.scaffold00052 409426 1 A G - ReadM SNP 0017.scaffold00052 409472 1 A G - ReadM SNP 0017.scaffold00052 409514 1 T C - ReadM SNP 0017.scaffold00052 409522 1 G T - ReadM SNP 0017.scaffold00052 409569 1 T A - ReadM SNP 0017.scaffold00052 409577 1 A T - ReadM SNP 0017.scaffold00052 409586 1 A T - ReadM SNP 0017.scaffold00052 409722 1 T A - ReadM SNP 0017.scaffold00052 409734 1 C T - ReadM SNP 0017.scaffold00052 409748 1 C G - ReadM SNP 0017.scaffold00052 409770 1 C A - ReadM SNP 0017.scaffold00052 409872 1 A G - ReadM SNP 0017.scaffold00052 410001 1 T A - ReadM SNP 0017.scaffold00052 410044 1 C T - ReadM SNP 0017.scaffold00052 410081 1 A C - ReadM SNP 0017.scaffold00052 410105 1 T C - ReadM INDEL 0017.scaffold00052 410173 1 . C - ReadM SNP 0017.scaffold00052 410234 1 G A - ReadM SNP 0017.scaffold00052 410263 1 G A - ReadM SNP 0017.scaffold00052 410283 1 G C - ReadM SNP 0017.scaffold00052 410352 1 C T - ReadM SNP 0017.scaffold00052 410357 1 G A - ReadM SNP 0017.scaffold00052 410379 1 T A - ReadM SNP 0017.scaffold00052 410473 1 T C - ReadM SNP 0017.scaffold00052 410505 1 T C - ScafM SNP 0017.scaffold00052 412279 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 412325 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 412329 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 412336 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 412457 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 412536 1 G C scaffold13175 ScafM INDEL 0017.scaffold00052 412593 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 412645 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 412673 5 ATATG ..... scaffold13175 ScafM SNP 0017.scaffold00052 412706 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 412725 1 C A scaffold13175 ScafM INDEL 0017.scaffold00052 412771 2 AT .. scaffold13175 ScafM INDEL 0017.scaffold00052 412820 1 . A scaffold13175 Both SNP 0017.scaffold00052 412890 1 A C scaffold13175 Both SNP 0017.scaffold00052 412938 1 T C scaffold13175 Both SNP 0017.scaffold00052 412957 1 T A scaffold13175 Both SNP 0017.scaffold00052 413007 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 413152 1 T C scaffold13175 Both SNP 0017.scaffold00052 413179 1 T C scaffold13175 ScafM INDEL 0017.scaffold00052 413515 8 ........ AAGTTAAT scaffold13175 Both SNP 0017.scaffold00052 413530 1 G T scaffold13175 Both INDEL 0017.scaffold00052 413646 1 . T scaffold13175 Both SNP 0017.scaffold00052 413659 1 C A scaffold13175 Both SNP 0017.scaffold00052 413684 1 A G scaffold13175 Both SNP 0017.scaffold00052 413765 1 T G scaffold13175 Both SNP 0017.scaffold00052 413775 1 G A scaffold13175 Both SNP 0017.scaffold00052 413780 1 G C scaffold13175 Both SNP 0017.scaffold00052 413842 1 T C scaffold13175 Both SNP 0017.scaffold00052 413865 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 413903 1 C . scaffold13175 ScafM SNP 0017.scaffold00052 413907 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 413929 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 413931 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 413949 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 413965 1 C T scaffold13175 Both SNP 0017.scaffold00052 413998 1 G A scaffold13175 Both SNP 0017.scaffold00052 414051 1 G A scaffold13175 Both SNP 0017.scaffold00052 414054 1 G A scaffold13175 Both INDEL 0017.scaffold00052 414072 1 . A scaffold13175 Both SNP 0017.scaffold00052 414127 1 A G scaffold13175 Both SNP 0017.scaffold00052 414132 1 C T scaffold13175 Both SNP 0017.scaffold00052 414171 1 A C scaffold13175 Both INDEL 0017.scaffold00052 414239 1 T . scaffold13175 ScafM SNP 0017.scaffold00052 414288 2 CA TT scaffold13175 Both SNP 0017.scaffold00052 414650 1 C T scaffold13175 Both SNP 0017.scaffold00052 414679 1 G T scaffold13175 Both INDEL 0017.scaffold00052 414699 1 . T scaffold13175 Both SNP 0017.scaffold00052 414769 1 T G scaffold13175 ReadM INDEL 0017.scaffold00052 415051 1 T . - Both SNP 0017.scaffold00052 415077 1 T C scaffold13175 Both SNP 0017.scaffold00052 415110 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 415134 1 C T scaffold13175 Both SNP 0017.scaffold00052 415276 1 G A scaffold13175 Both SNP 0017.scaffold00052 415417 1 A G scaffold13175 Both SNP 0017.scaffold00052 415436 1 A G scaffold13175 Both SNP 0017.scaffold00052 415930 1 G T scaffold13175 Both SNP 0017.scaffold00052 415973 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 416073 1 T A scaffold13175 ReadM SNP 0017.scaffold00052 416142 1 C T - ReadM INDEL 0017.scaffold00052 416182 1 . A - ReadM SNP 0017.scaffold00052 416294 1 A G - ReadM SNP 0017.scaffold00052 416317 1 G T - ReadM SNP 0017.scaffold00052 416378 1 C A - ReadM SNP 0017.scaffold00052 416597 1 A G - ReadM SNP 0017.scaffold00052 416610 1 T C - ReadM SNP 0017.scaffold00052 416634 1 C T - ReadM SNP 0017.scaffold00052 416713 1 G A - ReadM SNP 0017.scaffold00052 416899 1 A C - ReadM SNP 0017.scaffold00052 416932 1 T C - ReadM SNP 0017.scaffold00052 416942 1 T C - ReadM SNP 0017.scaffold00052 417099 1 C A - ReadM SNP 0017.scaffold00052 417110 1 C T - ReadM SNP 0017.scaffold00052 417272 1 C A - ReadM SNP 0017.scaffold00052 417366 1 A C - ReadM SNP 0017.scaffold00052 417419 1 G A - Both SNP 0017.scaffold00052 417530 1 T C scaffold13175 ReadM SNP 0017.scaffold00052 417555 1 C A - ReadM SNP 0017.scaffold00052 417652 1 T C - ReadM SNP 0017.scaffold00052 417659 1 T G - ReadM SNP 0017.scaffold00052 417749 1 G A - ReadM SNP 0017.scaffold00052 417757 1 T C - ReadM SNP 0017.scaffold00052 417865 1 T C - ReadM SNP 0017.scaffold00052 417879 1 C T - ReadM SNP 0017.scaffold00052 417974 1 T G - Both SNP 0017.scaffold00052 418105 1 A G scaffold13175 Both INDEL 0017.scaffold00052 418237 1 . T scaffold13175 Both SNP 0017.scaffold00052 418300 1 G A scaffold13175 Both SNP 0017.scaffold00052 418331 1 A G scaffold13175 ReadM SNP 0017.scaffold00052 418552 1 C T - ReadM SNP 0017.scaffold00052 418578 1 T C - ReadM SNP 0017.scaffold00052 418600 1 A C - ReadM SNP 0017.scaffold00052 418654 1 T C - ReadM SNP 0017.scaffold00052 418666 1 G T - ReadM SNP 0017.scaffold00052 418688 1 T C - Both SNP 0017.scaffold00052 418705 1 A C scaffold13175 Both SNP 0017.scaffold00052 418887 1 A C scaffold13175 Both SNP 0017.scaffold00052 418897 1 A G scaffold13175 Both SNP 0017.scaffold00052 418942 1 C A scaffold13175 Both SNP 0017.scaffold00052 418947 1 T C scaffold13175 ReadM SNP 0017.scaffold00052 419117 1 G T - ReadM SNP 0017.scaffold00052 419130 1 A G - ReadM SNP 0017.scaffold00052 419160 1 T C - ReadM SNP 0017.scaffold00052 419211 1 T A - ReadM SNP 0017.scaffold00052 419423 1 C T - ReadM SNP 0017.scaffold00052 419477 1 T C - ReadM INDEL 0017.scaffold00052 419695 2 .. AT - ReadM SNP 0017.scaffold00052 419830 1 G T - ReadM SNP 0017.scaffold00052 419836 1 C T - Both SNP 0017.scaffold00052 419929 1 A G scaffold13175 Both SNP 0017.scaffold00052 420078 1 G A scaffold13175 ReadM SNP 0017.scaffold00052 421401 1 G A - ReadM SNP 0017.scaffold00052 421412 1 C T - ReadM SNP 0017.scaffold00052 421426 1 T A - ReadM SNP 0017.scaffold00052 421595 1 G A - ReadM SNP 0017.scaffold00052 421759 1 C A - ReadM SNP 0017.scaffold00052 421823 1 T G - ReadM SNP 0017.scaffold00052 421998 1 C T - ReadM SNP 0017.scaffold00052 422017 1 C A - ReadM SNP 0017.scaffold00052 422027 1 G A - ReadM SNP 0017.scaffold00052 422065 1 T A - ReadM SNP 0017.scaffold00052 422118 1 A G - ReadM SNP 0017.scaffold00052 422188 1 G A - ReadM SNP 0017.scaffold00052 422222 1 G A - ReadM SNP 0017.scaffold00052 422276 1 T C - ReadM SNP 0017.scaffold00052 422315 1 T C - ReadM INDEL 0017.scaffold00052 422362 1 T . - ReadM SNP 0017.scaffold00052 422393 1 C T - ReadM SNP 0017.scaffold00052 422398 1 T C - ReadM SNP 0017.scaffold00052 422486 1 G A - ReadM SNP 0017.scaffold00052 422509 1 G A - ReadM SNP 0017.scaffold00052 422527 1 T G - ReadM SNP 0017.scaffold00052 422537 1 G A - ReadM SNP 0017.scaffold00052 422622 1 G A - ReadM SNP 0017.scaffold00052 422639 1 A C - ReadM SNP 0017.scaffold00052 422641 1 G T - ReadM SNP 0017.scaffold00052 422698 1 G C - ReadM SNP 0017.scaffold00052 422765 1 G C - ReadM SNP 0017.scaffold00052 422774 1 A G - ReadM SNP 0017.scaffold00052 422795 1 T C - ReadM SNP 0017.scaffold00052 422868 1 G A - ReadM SNP 0017.scaffold00052 422882 1 A G - ReadM SNP 0017.scaffold00052 422901 1 A T - ReadM SNP 0017.scaffold00052 423097 1 C T - ReadM SNP 0017.scaffold00052 423162 1 A C - ReadM SNP 0017.scaffold00052 423208 1 G A - ReadM SNP 0017.scaffold00052 423319 1 T C - ReadM SNP 0017.scaffold00052 423360 1 C T - ReadM SNP 0017.scaffold00052 423444 1 T A - ReadM SNP 0017.scaffold00052 423472 1 A G - ReadM SNP 0017.scaffold00052 423553 1 C T - ReadM INDEL 0017.scaffold00052 423564 2 TT .. - Both SNP 0017.scaffold00052 423598 1 G A scaffold13175 Both SNP 0017.scaffold00052 423675 1 G T scaffold13175 ReadM SNP 0017.scaffold00052 423751 1 C A - ReadM SNP 0017.scaffold00052 423788 1 T C - ReadM SNP 0017.scaffold00052 423928 1 G C - ReadM SNP 0017.scaffold00052 423968 1 T A - ReadM SNP 0017.scaffold00052 424004 1 T C - ReadM SNP 0017.scaffold00052 424107 1 C G - ReadM SNP 0017.scaffold00052 424191 1 G T - ReadM SNP 0017.scaffold00052 424375 1 A G - ReadM SNP 0017.scaffold00052 424380 1 G A - ReadM SNP 0017.scaffold00052 424473 1 C T - ReadM SNP 0017.scaffold00052 424534 1 G C - ReadM SNP 0017.scaffold00052 424543 1 C A - ReadM SNP 0017.scaffold00052 424565 1 C T - ReadM SNP 0017.scaffold00052 424609 1 G A - ReadM SNP 0017.scaffold00052 424640 1 T C - ReadM SNP 0017.scaffold00052 424709 1 G A - ReadM SNP 0017.scaffold00052 424721 1 A C - ReadM INDEL 0017.scaffold00052 424722 1 . G - ReadM SNP 0017.scaffold00052 424776 1 T C - ReadM SNP 0017.scaffold00052 424949 1 G A - ReadM SNP 0017.scaffold00052 424952 1 T C - ReadM INDEL 0017.scaffold00052 425040 1 A . - ReadM SNP 0017.scaffold00052 425254 1 G A - ReadM SNP 0017.scaffold00052 425261 1 A G - ReadM SNP 0017.scaffold00052 425300 2 AT GG - ReadM SNP 0017.scaffold00052 425416 1 A G - ReadM SNP 0017.scaffold00052 425476 1 C T - ReadM SNP 0017.scaffold00052 425518 1 G C - Both SNP 0017.scaffold00052 425571 1 C T scaffold13175 Both SNP 0017.scaffold00052 425671 1 A C scaffold13175 Both SNP 0017.scaffold00052 425752 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 425841 1 C A scaffold13175 Both SNP 0017.scaffold00052 425891 1 G C scaffold13175 ReadM SNP 0017.scaffold00052 425974 1 T C - ReadM SNP 0017.scaffold00052 426047 1 T C - ReadM SNP 0017.scaffold00052 426049 1 T G - ReadM SNP 0017.scaffold00052 426174 1 T C - ReadM SNP 0017.scaffold00052 426192 1 A G - ReadM SNP 0017.scaffold00052 426216 1 T G - ReadM INDEL 0017.scaffold00052 426342 2 TT .. - ReadM SNP 0017.scaffold00052 426398 1 T A - ReadM SNP 0017.scaffold00052 426430 1 C T - ReadM SNP 0017.scaffold00052 426460 1 C G - ReadM SNP 0017.scaffold00052 426515 1 T C - ReadM SNP 0017.scaffold00052 426554 1 C A - ReadM SNP 0017.scaffold00052 426582 1 T C - ReadM SNP 0017.scaffold00052 426633 1 A G - ReadM SNP 0017.scaffold00052 426705 1 C G - Both SNP 0017.scaffold00052 426872 1 A C scaffold13175 Both SNP 0017.scaffold00052 426918 1 A C scaffold13175 Both INDEL 0017.scaffold00052 426963 1 . A scaffold13175 ReadM SNP 0017.scaffold00052 427042 1 C G - ReadM SNP 0017.scaffold00052 427056 1 C T - ReadM SNP 0017.scaffold00052 427138 1 G C - ReadM SNP 0017.scaffold00052 427165 1 T C - ReadM SNP 0017.scaffold00052 427260 1 C T - ReadM SNP 0017.scaffold00052 427280 1 T C - ReadM SNP 0017.scaffold00052 427283 1 C T - ReadM SNP 0017.scaffold00052 427318 1 G A - ReadM SNP 0017.scaffold00052 427347 1 G A - ReadM SNP 0017.scaffold00052 427377 1 C T - ReadM SNP 0017.scaffold00052 427435 1 A C - ReadM SNP 0017.scaffold00052 427615 1 T G - ReadM SNP 0017.scaffold00052 427777 1 C T - ReadM SNP 0017.scaffold00052 427917 1 C T - ReadM SNP 0017.scaffold00052 427921 1 T C - ReadM SNP 0017.scaffold00052 427943 1 T G - ReadM SNP 0017.scaffold00052 428141 1 C A - ReadM SNP 0017.scaffold00052 428156 1 G C - ReadM SNP 0017.scaffold00052 428226 1 G T - ReadM SNP 0017.scaffold00052 428292 1 T C - ReadM SNP 0017.scaffold00052 428312 1 G A - ReadM SNP 0017.scaffold00052 428486 1 G A - ReadM SNP 0017.scaffold00052 428643 1 A G - ReadM SNP 0017.scaffold00052 428715 1 T C - ReadM SNP 0017.scaffold00052 428784 1 T G - ReadM SNP 0017.scaffold00052 428827 1 A G - ReadM SNP 0017.scaffold00052 428892 1 C A - ReadM SNP 0017.scaffold00052 428940 1 T C - ReadM SNP 0017.scaffold00052 428942 1 G A - ReadM SNP 0017.scaffold00052 429014 1 T G - ReadM SNP 0017.scaffold00052 429100 1 C A - ReadM SNP 0017.scaffold00052 429163 1 C G - ReadM SNP 0017.scaffold00052 429188 1 T A - ReadM SNP 0017.scaffold00052 429226 1 C T - ReadM SNP 0017.scaffold00052 429270 1 C G - ReadM SNP 0017.scaffold00052 429424 1 T G - ReadM SNP 0017.scaffold00052 429465 1 T C - ReadM SNP 0017.scaffold00052 429526 1 C G - ReadM SNP 0017.scaffold00052 429711 1 G C - ReadM SNP 0017.scaffold00052 429803 1 G A - ReadM SNP 0017.scaffold00052 429810 1 T C - ReadM SNP 0017.scaffold00052 429839 1 G C - ReadM SNP 0017.scaffold00052 429883 1 A G - ReadM SNP 0017.scaffold00052 429900 1 C T - ReadM SNP 0017.scaffold00052 429944 1 C T - ReadM SNP 0017.scaffold00052 429991 1 G A - ReadM SNP 0017.scaffold00052 430028 1 G T - ReadM SNP 0017.scaffold00052 430035 1 A T - ReadM SNP 0017.scaffold00052 430256 1 A G - ReadM SNP 0017.scaffold00052 430369 1 T C - ReadM SNP 0017.scaffold00052 430473 1 G A - ReadM SNP 0017.scaffold00052 430476 1 C T - ReadM SNP 0017.scaffold00052 430541 1 C T - ReadM SNP 0017.scaffold00052 430547 1 C T - Both INDEL 0017.scaffold00052 430709 3 TCT ... scaffold13175 Both SNP 0017.scaffold00052 430777 1 T C scaffold13175 Both SNP 0017.scaffold00052 430844 1 G T scaffold13175 Both SNP 0017.scaffold00052 430846 1 A G scaffold13175 Both SNP 0017.scaffold00052 430866 1 T G scaffold13175 Both SNP 0017.scaffold00052 430952 1 C G scaffold13175 Both SNP 0017.scaffold00052 430984 1 T G scaffold13175 Both SNP 0017.scaffold00052 431029 1 G T scaffold13175 Both SNP 0017.scaffold00052 431167 1 A G scaffold13175 Both SNP 0017.scaffold00052 431181 1 C T scaffold13175 ReadM INDEL 0017.scaffold00052 431203 1 A . - ScafM INDEL 0017.scaffold00052 431205 2 .. CC scaffold13175 ScafM INDEL 0017.scaffold00052 431207 1 . A scaffold13175 ScafM INDEL 0017.scaffold00052 431208 2 .. TA scaffold13175 ScafM SNP 0017.scaffold00052 431214 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 431246 1 C A scaffold13175 ScafM SNP 0017.scaffold00052 431277 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 431291 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 431293 1 A G scaffold13175 ScafM INDEL 0017.scaffold00052 431350 13 ............. TCACGAATCCCAG scaffold13175 ScafM INDEL 0017.scaffold00052 431351 2 .. AC scaffold13175 ScafM INDEL 0017.scaffold00052 431353 2 .. GC scaffold13175 ReadM SNP 0017.scaffold00052 431354 1 A G - ScafM INDEL 0017.scaffold00052 431354 1 . G scaffold13175 Both SNP 0017.scaffold00052 431379 1 T C scaffold13175 Both SNP 0017.scaffold00052 431558 1 T A scaffold13175 Both SNP 0017.scaffold00052 431692 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 431717 2 TT AA scaffold13175 Both SNP 0017.scaffold00052 431739 1 G A scaffold13175 Both SNP 0017.scaffold00052 431769 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 431859 1 A C scaffold13175 ScafM SNP 0017.scaffold00052 431893 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 431902 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 431907 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 431923 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 431926 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 431946 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 431990 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 431999 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 432021 1 G C scaffold13175 ScafM SNP 0017.scaffold00052 432030 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 432036 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 432061 1 C T scaffold13175 ScafM INDEL 0017.scaffold00052 432062 12 ............ TCCCATCAACAC scaffold13175 ScafM INDEL 0017.scaffold00052 432075 1 . A scaffold13175 ScafM INDEL 0017.scaffold00052 432081 3 ... AAT scaffold13175 ScafM INDEL 0017.scaffold00052 432085 3 ... AAA scaffold13175 ScafM SNP 0017.scaffold00052 432092 1 C G scaffold13175 ScafM SNP 0017.scaffold00052 432099 1 T G scaffold13175 ScafM INDEL 0017.scaffold00052 432106 1 A . scaffold13175 ScafM INDEL 0017.scaffold00052 432108 1 . G scaffold13175 ScafM SNP 0017.scaffold00052 432115 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 432121 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 432126 2 TT AA scaffold13175 Both SNP 0017.scaffold00052 432246 1 G T scaffold13175 Both SNP 0017.scaffold00052 432277 1 A G scaffold13175 Both SNP 0017.scaffold00052 432295 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 432415 2 TT CA scaffold13175 Both SNP 0017.scaffold00052 432427 1 C T scaffold13175 Both SNP 0017.scaffold00052 432462 1 A G scaffold13175 Both SNP 0017.scaffold00052 432473 1 T A scaffold13175 Both SNP 0017.scaffold00052 432502 1 G A scaffold13175 Both SNP 0017.scaffold00052 432564 1 G A scaffold13175 Both SNP 0017.scaffold00052 432571 1 A T scaffold13175 Both SNP 0017.scaffold00052 432601 1 G A scaffold13175 Both INDEL 0017.scaffold00052 432634 2 .. GG scaffold13175 Both SNP 0017.scaffold00052 432704 1 G T scaffold13175 Both SNP 0017.scaffold00052 432710 1 G A scaffold13175 Both SNP 0017.scaffold00052 432722 1 G A scaffold13175 Both SNP 0017.scaffold00052 432786 1 A T scaffold13175 Both SNP 0017.scaffold00052 432939 1 G A scaffold13175 Both SNP 0017.scaffold00052 433016 1 C G scaffold13175 Both SNP 0017.scaffold00052 433052 1 A G scaffold13175 Both SNP 0017.scaffold00052 433054 1 C T scaffold13175 Both SNP 0017.scaffold00052 433058 1 G T scaffold13175 Both SNP 0017.scaffold00052 433300 1 C T scaffold13175 Both SNP 0017.scaffold00052 433421 1 T C scaffold13175 Both SNP 0017.scaffold00052 433439 1 T G scaffold13175 Both SNP 0017.scaffold00052 433651 1 A G scaffold13175 Both SNP 0017.scaffold00052 433678 1 A T scaffold13175 Both INDEL 0017.scaffold00052 433681 1 . T scaffold13175 Both SNP 0017.scaffold00052 433745 1 A G scaffold13175 Both SNP 0017.scaffold00052 433765 1 A G scaffold13175 Both SNP 0017.scaffold00052 433829 1 C T scaffold13175 Both SNP 0017.scaffold00052 433868 1 G A scaffold13175 Both SNP 0017.scaffold00052 433891 1 A G scaffold13175 Both SNP 0017.scaffold00052 434004 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 434215 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 434242 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 434249 1 G A scaffold13175 ReadM SNP 0017.scaffold00052 434553 1 G A - ScafM SNP 0017.scaffold00052 434699 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 434713 1 G T scaffold13175 ScafM SNP 0017.scaffold00052 434728 1 T G scaffold13175 ScafM SNP 0017.scaffold00052 434746 1 C T scaffold13175 Both SNP 0017.scaffold00052 434825 1 C G scaffold13175 Both SNP 0017.scaffold00052 434836 1 A G scaffold13175 Both SNP 0017.scaffold00052 434869 1 T C scaffold13175 Both SNP 0017.scaffold00052 434955 1 G A scaffold13175 Both INDEL 0017.scaffold00052 435096 1 . T scaffold13175 Both SNP 0017.scaffold00052 435172 1 T C scaffold13175 Both SNP 0017.scaffold00052 435225 1 A G scaffold13175 Both SNP 0017.scaffold00052 435291 1 G A scaffold13175 Both SNP 0017.scaffold00052 435358 1 T C scaffold13175 Both SNP 0017.scaffold00052 435403 1 G A scaffold13175 Both SNP 0017.scaffold00052 435414 1 T G scaffold13175 Both SNP 0017.scaffold00052 435518 1 A G scaffold13175 Both SNP 0017.scaffold00052 435547 1 G C scaffold13175 Both SNP 0017.scaffold00052 435563 1 T G scaffold13175 ReadM INDEL 0017.scaffold00052 435732 3 ... TTC - ReadM SNP 0017.scaffold00052 436055 1 C T - ReadM SNP 0017.scaffold00052 436060 1 A G - ReadM SNP 0017.scaffold00052 436285 1 T A - ReadM SNP 0017.scaffold00052 436608 1 A T - Both SNP 0017.scaffold00052 437042 1 G T scaffold13175 Both SNP 0017.scaffold00052 437105 1 T C scaffold13175 Both SNP 0017.scaffold00052 437125 1 G A scaffold13175 Both SNP 0017.scaffold00052 437190 1 C T scaffold13175 ScafM SNP 0017.scaffold00052 437205 1 T A scaffold13175 ScafM INDEL 0017.scaffold00052 437232 2 .. TT scaffold13175 ScafM SNP 0017.scaffold00052 437234 1 C T scaffold13175 Both SNP 0017.scaffold00052 437340 1 A T scaffold13175 Both SNP 0017.scaffold00052 437368 1 A G scaffold13175 ScafM INDEL 0017.scaffold00052 437384 9 ......... TTTGTCTAC scaffold13175 Both SNP 0017.scaffold00052 437439 1 C G scaffold13175 Both SNP 0017.scaffold00052 437524 1 C T scaffold13175 Both SNP 0017.scaffold00052 437757 1 A T scaffold13175 Both SNP 0017.scaffold00052 437783 1 T A scaffold13175 Both SNP 0017.scaffold00052 437807 1 T C scaffold13175 Both SNP 0017.scaffold00052 437860 1 A G scaffold13175 Both INDEL 0017.scaffold00052 437924 1 T . scaffold13175 ReadM INDEL 0017.scaffold00052 438171 1 T . - Both SNP 0017.scaffold00052 438241 1 A G scaffold13175 Both SNP 0017.scaffold00052 438276 1 T C scaffold13175 Both SNP 0017.scaffold00052 438282 1 T G scaffold13175 Both SNP 0017.scaffold00052 438360 1 G T scaffold13175 Both SNP 0017.scaffold00052 438427 1 A G scaffold13175 Both SNP 0017.scaffold00052 438507 1 T A scaffold13175 ReadM SNP 0017.scaffold00052 438599 1 G T - ReadM SNP 0017.scaffold00052 438744 1 T A - ReadM SNP 0017.scaffold00052 438807 1 T C - ReadM SNP 0017.scaffold00052 438962 1 T C - ReadM SNP 0017.scaffold00052 438964 1 T C - ReadM INDEL 0017.scaffold00052 438994 1 T . - Both SNP 0017.scaffold00052 439102 1 T C scaffold13175 Both SNP 0017.scaffold00052 439269 1 A G scaffold13175 Both INDEL 0017.scaffold00052 439311 2 AC .. scaffold13175 ScafM SNP 0017.scaffold00052 439340 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 439380 1 T C scaffold13175 ScafM SNP 0017.scaffold00052 439392 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 439470 1 G A scaffold13175 ScafM SNP 0017.scaffold00052 439472 2 AC GT scaffold13175 ScafM INDEL 0017.scaffold00052 439475 1 T . scaffold13175 ScafM SNP 0017.scaffold00052 439481 2 CA TT scaffold13175 ScafM SNP 0017.scaffold00052 439484 1 A T scaffold13175 ScafM SNP 0017.scaffold00052 439491 1 A G scaffold13175 ScafM SNP 0017.scaffold00052 439493 2 GT AC scaffold13175 ScafM INDEL 0017.scaffold00052 439495 1 . T scaffold13175 ScafM SNP 0017.scaffold00052 439504 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 439518 1 G A scaffold13175 ScafM INDEL 0017.scaffold00052 439544 5 ATCAG ..... scaffold13175 Both SNP 0017.scaffold00052 439614 1 C T scaffold13175 Both SNP 0017.scaffold00052 439620 1 C T scaffold13175 Both INDEL 0017.scaffold00052 439724 1 T . scaffold13175 ScafM SNP 0017.scaffold00052 439894 1 T A scaffold13175 ScafM SNP 0017.scaffold00052 439904 1 C A scaffold13175 ReadM SNP 0017.scaffold00052 439995 1 T C - ReadM SNP 0017.scaffold00052 440031 1 A C - ReadM SNP 0017.scaffold00052 440046 1 C A - ReadM SNP 0017.scaffold00052 440099 1 C T - ReadM SNP 0017.scaffold00052 440110 1 G A - ReadM SNP 0017.scaffold00052 440197 1 G A - ReadM SNP 0017.scaffold00052 440310 1 T C - ReadM SNP 0017.scaffold00052 440326 1 A G - ReadM SNP 0017.scaffold00052 440333 1 G A - ReadM SNP 0017.scaffold00052 440366 1 A G - ReadM SNP 0017.scaffold00052 440598 1 C T - ReadM SNP 0017.scaffold00052 440647 1 C A - ReadM SNP 0017.scaffold00052 440879 1 T A - ReadM SNP 0017.scaffold00052 440932 1 C G - ReadM SNP 0017.scaffold00052 440948 1 A G - ReadM INDEL 0017.scaffold00052 441027 3 GAC ... - ReadM SNP 0017.scaffold00052 441279 1 A G - ReadM SNP 0017.scaffold00052 441336 1 G A - ReadM SNP 0017.scaffold00052 441373 1 C A - ReadM INDEL 0017.scaffold00052 441399 1 . A - ReadM SNP 0017.scaffold00052 441453 1 T C - ReadM SNP 0017.scaffold00052 441494 1 C A - ReadM SNP 0017.scaffold00052 441497 1 G A - ReadM SNP 0017.scaffold00052 441645 1 C T - ReadM SNP 0017.scaffold00052 441652 1 A G - ReadM SNP 0017.scaffold00052 441754 1 T C - ReadM SNP 0017.scaffold00052 441831 1 T C - ReadM SNP 0017.scaffold00052 441939 1 C T - ReadM SNP 0017.scaffold00052 442141 1 G A - ReadM SNP 0017.scaffold00052 442519 1 A T - ReadM SNP 0017.scaffold00052 443297 1 G A - ReadM SNP 0017.scaffold00052 443388 1 G A - ReadM SNP 0017.scaffold00052 443415 1 G A - ScafM INDEL 0017.scaffold00052 443458 3 TTG ... scaffold10675 ScafM INDEL 0017.scaffold00052 443463 7 TAAACAA ....... scaffold10675 ScafM INDEL 0017.scaffold00052 443471 6 CTTCTG ...... scaffold10675 ScafM SNP 0017.scaffold00052 443514 1 C G scaffold10675 ScafM SNP 0017.scaffold00052 443518 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 443721 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 443933 1 A G scaffold10675 Both SNP 0017.scaffold00052 443976 1 C T scaffold10675 Both SNP 0017.scaffold00052 444023 1 T G scaffold10675 Both SNP 0017.scaffold00052 444089 1 A C scaffold10675 Both SNP 0017.scaffold00052 444114 1 T G scaffold10675 ScafM SNP 0017.scaffold00052 444135 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 444148 1 G A scaffold10675 Both SNP 0017.scaffold00052 444185 1 C T scaffold10675 Both SNP 0017.scaffold00052 444195 1 C T scaffold10675 Both SNP 0017.scaffold00052 444286 1 A G scaffold10675 Both SNP 0017.scaffold00052 444310 1 A G scaffold10675 ScafM INDEL 0017.scaffold00052 444330 1 . G scaffold10675 ScafM INDEL 0017.scaffold00052 444372 1 . G scaffold10675 ScafM INDEL 0017.scaffold00052 444373 1 . G scaffold10675 ScafM SNP 0017.scaffold00052 444407 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 444422 1 A C scaffold10675 ScafM INDEL 0017.scaffold00052 444449 4 ATGA .... scaffold10675 Both SNP 0017.scaffold00052 444488 1 C T scaffold10675 Both SNP 0017.scaffold00052 444497 1 G A scaffold10675 Both SNP 0017.scaffold00052 444552 1 C T scaffold10675 Both SNP 0017.scaffold00052 444692 1 G C scaffold10675 Both SNP 0017.scaffold00052 444703 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 444781 1 T G scaffold10675 ScafM INDEL 0017.scaffold00052 444795 2 AG .. scaffold10675 ScafM INDEL 0017.scaffold00052 444798 3 TAA ... scaffold10675 ScafM INDEL 0017.scaffold00052 444803 28 AGGTCTAGTTTAGGTTCGAGGTTTTTGA ............................ scaffold10675 ScafM INDEL 0017.scaffold00052 444832 1 T . scaffold10675 Both SNP 0017.scaffold00052 444905 1 T G scaffold10675 Both SNP 0017.scaffold00052 445006 1 A C scaffold10675 ScafM SNP 0017.scaffold00052 445051 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 445258 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 445355 1 G A scaffold10675 ReadM SNP 0017.scaffold00052 447291 1 T A - ReadM INDEL 0017.scaffold00052 447342 3 ... CTA - ReadM SNP 0017.scaffold00052 447517 1 G A - ReadM SNP 0017.scaffold00052 447648 2 TT CC - Both SNP 0017.scaffold00052 447763 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 447770 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 447786 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 447791 2 TG GC scaffold10675 Both SNP 0017.scaffold00052 447946 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 447960 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 447982 1 C G scaffold10675 Both SNP 0017.scaffold00052 448027 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 448074 1 T C scaffold10675 ReadM SNP 0017.scaffold00052 448155 1 G A - ReadM SNP 0017.scaffold00052 448283 1 A G - ReadM SNP 0017.scaffold00052 448372 1 T C - ReadM SNP 0017.scaffold00052 448374 1 A C - Both SNP 0017.scaffold00052 448428 1 G C scaffold10675 ScafM INDEL 0017.scaffold00052 448459 2 TT .. scaffold10675 ScafM SNP 0017.scaffold00052 448464 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 448606 2 CG AT scaffold10675 Both SNP 0017.scaffold00052 448684 1 A G scaffold10675 Both SNP 0017.scaffold00052 448689 1 T C scaffold10675 Both SNP 0017.scaffold00052 448769 1 T C scaffold10675 Both SNP 0017.scaffold00052 448811 1 C G scaffold10675 ScafM SNP 0017.scaffold00052 448831 1 A G scaffold10675 ScafM INDEL 0017.scaffold00052 448847 2 TT .. scaffold10675 ScafM SNP 0017.scaffold00052 448861 1 T G scaffold10675 ScafM SNP 0017.scaffold00052 448904 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 448906 1 A C scaffold10675 Both SNP 0017.scaffold00052 448962 1 C T scaffold10675 ScafM INDEL 0017.scaffold00052 449087 6 ...... TAATAT scaffold10675 Both SNP 0017.scaffold00052 449269 1 G A scaffold10675 Both SNP 0017.scaffold00052 449351 1 T C scaffold10675 Both SNP 0017.scaffold00052 449353 1 G A scaffold10675 ReadM SNP 0017.scaffold00052 449386 1 A C - ReadM SNP 0017.scaffold00052 449411 1 T C - Both SNP 0017.scaffold00052 449519 1 T A scaffold10675 Both SNP 0017.scaffold00052 449553 1 G A scaffold10675 Both SNP 0017.scaffold00052 449582 1 T G scaffold10675 Both INDEL 0017.scaffold00052 449597 1 G . scaffold10675 Both SNP 0017.scaffold00052 449694 1 T G scaffold10675 Both INDEL 0017.scaffold00052 449737 1 G . scaffold10675 ReadM SNP 0017.scaffold00052 449837 1 A G - ReadM SNP 0017.scaffold00052 449958 1 C A - Both SNP 0017.scaffold00052 450014 1 A G scaffold10675 Both SNP 0017.scaffold00052 450067 1 G C scaffold10675 Both SNP 0017.scaffold00052 450166 1 T G scaffold10675 Both SNP 0017.scaffold00052 450228 1 C A scaffold10675 Both SNP 0017.scaffold00052 450273 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 450313 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 450327 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 450329 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 450437 1 T G scaffold10675 Both SNP 0017.scaffold00052 450502 1 T C scaffold10675 Both SNP 0017.scaffold00052 450528 1 G T scaffold10675 ReadM SNP 0017.scaffold00052 450610 1 G A - ReadM INDEL 0017.scaffold00052 450808 2 .. TT - ReadM SNP 0017.scaffold00052 450828 1 G T - ReadM SNP 0017.scaffold00052 451318 1 C T - ReadM SNP 0017.scaffold00052 451351 1 A G - ReadM SNP 0017.scaffold00052 451468 1 A C - ReadM SNP 0017.scaffold00052 451487 1 C T - ReadM SNP 0017.scaffold00052 451629 1 A C - ReadM SNP 0017.scaffold00052 451644 1 G T - ReadM SNP 0017.scaffold00052 451649 1 A C - ReadM SNP 0017.scaffold00052 451696 1 C T - ReadM SNP 0017.scaffold00052 451777 1 C T - ReadM SNP 0017.scaffold00052 451829 1 A G - ReadM SNP 0017.scaffold00052 451890 1 T C - ReadM SNP 0017.scaffold00052 451927 1 T C - ReadM INDEL 0017.scaffold00052 452077 1 . C - ScafM SNP 0017.scaffold00052 453879 1 A C scaffold10675 Both SNP 0017.scaffold00052 454105 1 A G scaffold10675 ReadM SNP 0017.scaffold00052 454212 1 A G - ReadM INDEL 0017.scaffold00052 454216 1 . G - ReadM SNP 0017.scaffold00052 454256 1 C G - ReadM SNP 0017.scaffold00052 454271 1 A G - ReadM SNP 0017.scaffold00052 454298 1 T C - ReadM SNP 0017.scaffold00052 454377 1 G A - ScafM SNP 0017.scaffold00052 454421 1 G A scaffold33241 ScafM SNP 0017.scaffold00052 454452 1 C T scaffold33241 ScafM SNP 0017.scaffold00052 454458 1 C G scaffold33241 ScafM INDEL 0017.scaffold00052 454488 1 G . scaffold33241 ScafM INDEL 0017.scaffold00052 454496 1 T . scaffold33241 ScafM SNP 0017.scaffold00052 454522 1 C A scaffold33241 ReadM SNP 0017.scaffold00052 454617 1 C T - Both SNP 0017.scaffold00052 454850 1 A C scaffold10675 Both SNP 0017.scaffold00052 454863 1 A T scaffold10675 Both SNP 0017.scaffold00052 454967 1 T A scaffold10675 ReadM SNP 0017.scaffold00052 455120 1 G A - ReadM SNP 0017.scaffold00052 455122 1 C T - ReadM SNP 0017.scaffold00052 455273 1 T C - ReadM SNP 0017.scaffold00052 455419 1 A G - ReadM SNP 0017.scaffold00052 455421 1 C G - ScafM SNP 0017.scaffold00052 455704 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 455724 1 G C scaffold10675 ScafM SNP 0017.scaffold00052 455748 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 455771 1 T C scaffold10675 ScafM INDEL 0017.scaffold00052 455801 8 GACAGGTA ........ scaffold10675 ScafM SNP 0017.scaffold00052 456956 1 G T scaffold10675 ScafM SNP 0017.scaffold00052 456988 1 G T scaffold10675 ScafM INDEL 0017.scaffold00052 457349 1 . T scaffold10675 ReadM SNP 0017.scaffold00052 457579 1 T A - ReadM SNP 0017.scaffold00052 457652 1 T G - ReadM SNP 0017.scaffold00052 457721 1 A G - ReadM INDEL 0017.scaffold00052 457814 1 . T - Both SNP 0017.scaffold00052 457974 1 C T scaffold10675 Both SNP 0017.scaffold00052 458058 1 C T scaffold10675 ReadM SNP 0017.scaffold00052 458312 1 A G - ReadM SNP 0017.scaffold00052 458357 1 A G - ReadM SNP 0017.scaffold00052 458487 1 G A - ReadM SNP 0017.scaffold00052 458554 1 T C - ReadM SNP 0017.scaffold00052 458612 1 A G - ReadM SNP 0017.scaffold00052 458617 1 T C - ScafM SNP 0017.scaffold00052 458805 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 458807 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 458870 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 458899 1 G C scaffold10675 ScafM SNP 0017.scaffold00052 459108 1 T G scaffold10675 ScafM SNP 0017.scaffold00052 459565 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 459906 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 459941 1 C G scaffold10675 ScafM SNP 0017.scaffold00052 461203 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 461226 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 461269 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 461284 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 461308 1 A C scaffold10675 ScafM SNP 0017.scaffold00052 461337 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 461339 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 461342 1 G C scaffold10675 ScafM INDEL 0017.scaffold00052 461416 2 AC .. scaffold10675 ScafM SNP 0017.scaffold00052 461443 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 461448 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 461491 1 C T scaffold10675 ReadM SNP 0017.scaffold00052 463000 1 C T - ReadM SNP 0017.scaffold00052 463012 1 T C - ReadM SNP 0017.scaffold00052 463020 1 A G - ReadM SNP 0017.scaffold00052 463114 1 T A - ReadM SNP 0017.scaffold00052 463193 1 A T - ReadM SNP 0017.scaffold00052 463444 1 A T - ReadM SNP 0017.scaffold00052 463534 1 A G - ReadM SNP 0017.scaffold00052 463556 1 T C - ReadM SNP 0017.scaffold00052 463572 1 T C - ReadM SNP 0017.scaffold00052 463754 1 T A - ReadM SNP 0017.scaffold00052 463772 1 A C - ReadM SNP 0017.scaffold00052 463782 1 G C - ReadM SNP 0017.scaffold00052 463831 1 G A - ReadM SNP 0017.scaffold00052 463848 1 C A - ReadM INDEL 0017.scaffold00052 463892 1 . T - ScafM SNP 0017.scaffold00052 465213 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 465231 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 465243 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 465248 1 A G scaffold10675 ScafM INDEL 0017.scaffold00052 465594 1 C . scaffold28332 ScafM INDEL 0017.scaffold00052 465597 1 C . scaffold28332 ScafM SNP 0017.scaffold00052 465630 1 C T scaffold28332 ScafM INDEL 0017.scaffold00052 465672 3 ... TAT scaffold28332 ScafM SNP 0017.scaffold00052 465681 1 C T scaffold28332 ScafM SNP 0017.scaffold00052 465687 1 A G scaffold28332 ScafM SNP 0017.scaffold00052 465689 1 T C scaffold28332 ScafM SNP 0017.scaffold00052 465693 1 C T scaffold28332 ScafM SNP 0017.scaffold00052 465707 1 C T scaffold28332 ScafM INDEL 0017.scaffold00052 465710 3 ... ATC scaffold28332 ScafM SNP 0017.scaffold00052 465717 1 C T scaffold28332 ScafM SNP 0017.scaffold00052 465729 1 C A scaffold28332 ScafM SNP 0017.scaffold00052 465754 1 A C scaffold28332 ScafM SNP 0017.scaffold00052 465761 1 G C scaffold28332 ScafM SNP 0017.scaffold00052 465767 1 C T scaffold28332 ScafM SNP 0017.scaffold00052 465773 1 C T scaffold28332 ScafM SNP 0017.scaffold00052 465782 1 G A scaffold28332 ScafM SNP 0017.scaffold00052 465788 1 T A scaffold28332 ScafM SNP 0017.scaffold00052 465790 1 G A scaffold28332 ScafM SNP 0017.scaffold00052 465795 1 G A scaffold28332 ScafM SNP 0017.scaffold00052 465814 1 T C scaffold28332 ScafM SNP 0017.scaffold00052 465816 2 CT TC scaffold28332 ScafM SNP 0017.scaffold00052 465869 1 G C scaffold28332 ScafM INDEL 0017.scaffold00052 465883 4 .... AAAA scaffold28332 ScafM SNP 0017.scaffold00052 465885 1 C T scaffold28332 ScafM INDEL 0017.scaffold00052 465888 5 ..... GGAGT scaffold28332 ScafM INDEL 0017.scaffold00052 465889 3 ... GAA scaffold28332 ScafM INDEL 0017.scaffold00052 465890 2 .. TC scaffold28332 ScafM SNP 0017.scaffold00052 465912 1 T A scaffold28332 ScafM SNP 0017.scaffold00052 465924 1 C T scaffold28332 ScafM INDEL 0017.scaffold00052 465929 1 T . scaffold28332 ScafM SNP 0017.scaffold00052 465944 1 A C scaffold28332 ScafM INDEL 0017.scaffold00052 465947 1 C . scaffold28332 ScafM INDEL 0017.scaffold00052 465951 1 A . scaffold28332 ScafM SNP 0017.scaffold00052 465966 1 T C scaffold28332 ScafM SNP 0017.scaffold00052 465970 1 A T scaffold28332 ScafM SNP 0017.scaffold00052 465982 1 T C scaffold28332 ScafM SNP 0017.scaffold00052 465990 1 G A scaffold28332 ScafM SNP 0017.scaffold00052 465994 1 G C scaffold28332 ScafM SNP 0017.scaffold00052 465997 1 G C scaffold28332 ScafM SNP 0017.scaffold00052 466007 1 A T scaffold28332 ScafM SNP 0017.scaffold00052 466012 1 A T scaffold28332 ScafM SNP 0017.scaffold00052 466043 1 G T scaffold28332 ScafM SNP 0017.scaffold00052 466058 1 C G scaffold28332 ScafM SNP 0017.scaffold00052 466226 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 467003 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 467025 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 467042 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 467053 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 467063 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 467082 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 467101 1 C A scaffold10675 ScafM INDEL 0017.scaffold00052 467126 1 . A scaffold10675 ScafM SNP 0017.scaffold00052 467158 2 TT CC scaffold10675 ScafM SNP 0017.scaffold00052 467166 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 467204 1 T C scaffold10675 ScafM INDEL 0017.scaffold00052 467214 3 ... ACA scaffold10675 ScafM INDEL 0017.scaffold00052 467216 6 ...... TAGAAG scaffold10675 ScafM SNP 0017.scaffold00052 467272 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 467292 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 467300 1 C G scaffold10675 ScafM SNP 0017.scaffold00052 467328 2 AA GG scaffold10675 ScafM SNP 0017.scaffold00052 467336 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 467345 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 467386 2 CT TC scaffold10675 ScafM SNP 0017.scaffold00052 467389 1 C G scaffold10675 ScafM SNP 0017.scaffold00052 467400 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 467423 1 A C scaffold10675 ScafM SNP 0017.scaffold00052 467455 2 CT TC scaffold10675 ScafM SNP 0017.scaffold00052 467488 1 T G scaffold10675 ScafM SNP 0017.scaffold00052 467495 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 467497 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 467504 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 467554 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 467570 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 467616 1 C T scaffold10675 ScafM SNP 0017.scaffold00052 467624 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 467635 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 467637 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 467674 1 G T scaffold10675 ScafM SNP 0017.scaffold00052 467699 1 G C scaffold10675 ScafM SNP 0017.scaffold00052 478693 1 A G scaffold3389 ScafM SNP 0017.scaffold00052 478719 1 C T scaffold3389 ScafM SNP 0017.scaffold00052 478761 1 G A scaffold3389 ScafM SNP 0017.scaffold00052 482706 1 A C scaffold2578 ScafM SNP 0017.scaffold00052 482739 1 G T scaffold2578 ScafM SNP 0017.scaffold00052 482743 1 A G scaffold2578 ScafM SNP 0017.scaffold00052 482787 1 T C scaffold2578 ScafM SNP 0017.scaffold00052 482806 1 G A scaffold2578 ScafM SNP 0017.scaffold00052 482825 1 T C scaffold2578 ScafM SNP 0017.scaffold00052 482836 1 A G scaffold2578 ScafM SNP 0017.scaffold00052 482844 1 A G scaffold2578 ScafM INDEL 0017.scaffold00052 482860 4 .... TCTT scaffold2578 ScafM INDEL 0017.scaffold00052 482863 3 ... TAG scaffold2578 ScafM SNP 0017.scaffold00052 482886 1 T C scaffold2578 ScafM SNP 0017.scaffold00052 482893 1 C T scaffold2578 ScafM SNP 0017.scaffold00052 482897 1 T C scaffold2578 ScafM SNP 0017.scaffold00052 482905 1 G A scaffold2578 ScafM SNP 0017.scaffold00052 482915 1 A C scaffold2578 ScafM SNP 0017.scaffold00052 482927 1 C T scaffold2578 ScafM SNP 0017.scaffold00052 482954 1 C T scaffold2578 ScafM SNP 0017.scaffold00052 482958 1 T C scaffold2578 ReadM INDEL 0017.scaffold00052 499755 1 T . - ReadM SNP 0017.scaffold00052 499777 1 G A - ReadM SNP 0017.scaffold00052 500289 1 T A - ReadM SNP 0017.scaffold00052 500571 1 A G - ReadM SNP 0017.scaffold00052 500813 1 G A - ReadM SNP 0017.scaffold00052 500824 1 T C - ReadM SNP 0017.scaffold00052 500857 1 C A - ReadM SNP 0017.scaffold00052 501059 1 C T - ReadM SNP 0017.scaffold00052 501390 1 G A - ReadM SNP 0017.scaffold00052 501464 1 A G - ScafM SNP 0017.scaffold00052 501715 2 CG TA scaffold10675 ScafM SNP 0017.scaffold00052 501721 1 C A scaffold10675 ScafM SNP 0017.scaffold00052 501752 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 501756 2 TA CG scaffold10675 ScafM SNP 0017.scaffold00052 501762 1 A C scaffold10675 ScafM SNP 0017.scaffold00052 501960 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 501962 1 A T scaffold10675 ScafM SNP 0017.scaffold00052 501970 1 C T scaffold10675 ScafM INDEL 0017.scaffold00052 501991 8 CGAATCTT ........ scaffold10675 ScafM SNP 0017.scaffold00052 502002 1 G A scaffold10675 ScafM SNP 0017.scaffold00052 502026 1 A G scaffold10675 ScafM SNP 0017.scaffold00052 502057 1 T C scaffold10675 ScafM SNP 0017.scaffold00052 502113 2 CT TC scaffold10675 ScafM SNP 0017.scaffold00052 502129 1 A G scaffold10675 ScafM INDEL 0017.scaffold00052 502154 7 ATGATAG ......C scaffold10675 ScafM SNP 0017.scaffold00052 502206 1 G T scaffold10675 ReadM SNP 0017.scaffold00052 503750 1 G A - ReadM SNP 0017.scaffold00052 503838 1 T C - ReadM SNP 0017.scaffold00052 504283 1 C T - ReadM SNP 0017.scaffold00052 504314 1 C T - ReadM SNP 0017.scaffold00052 504347 1 A G - ReadM SNP 0017.scaffold00052 505019 1 C G - ReadM SNP 0017.scaffold00052 505055 1 A C - ReadM INDEL 0017.scaffold00052 505120 2 .. AG - ReadM SNP 0017.scaffold00052 509515 1 T C - ReadM SNP 0017.scaffold00052 509526 1 G A - ReadM SNP 0017.scaffold00052 512153 1 A C - ReadM SNP 0017.scaffold00052 512177 1 T A - ReadM SNP 0017.scaffold00052 512567 1 G T - ReadM SNP 0017.scaffold00052 512726 1 C T - ReadM SNP 0017.scaffold00052 513328 1 G C - ReadM SNP 0017.scaffold00052 513410 1 C A - ReadM SNP 0017.scaffold00052 513529 1 C T - ReadM SNP 0017.scaffold00052 513555 1 C T - ReadM SNP 0017.scaffold00052 513938 1 C T - ReadM SNP 0017.scaffold00052 514768 1 C T - ReadM SNP 0017.scaffold00052 514845 1 T C - ReadM SNP 0017.scaffold00052 514867 1 C T - ReadM SNP 0017.scaffold00052 515255 1 A C - Both SNP 0017.scaffold00052 516137 1 G A scaffold9942 Both SNP 0017.scaffold00052 516141 1 G A scaffold9942 Both SNP 0017.scaffold00052 516829 1 C A scaffold9942 Both SNP 0017.scaffold00052 517031 1 G T scaffold9942 ScafM SNP 0017.scaffold00052 517293 1 A C scaffold9942 ScafM SNP 0017.scaffold00052 517520 2 AA GG scaffold9942 ScafM SNP 0017.scaffold00052 517716 1 A T scaffold9942 ScafM SNP 0017.scaffold00052 517998 1 G A scaffold9942 ScafM SNP 0017.scaffold00052 518026 1 A T scaffold9942 ScafM INDEL 0017.scaffold00052 518321 78 .............................................................................. GATAATTTTCATATAAAAAGTCTACCTCAATTTCTTCTTCATTAAGTTTTTTGAAGCCGCTTTCGAGATGCTTGTTTT scaffold9942 ReadM SNP 0017.scaffold00052 518558 1 G A - ReadM SNP 0017.scaffold00052 518576 1 C T - ReadM SNP 0017.scaffold00052 519569 1 T A - ReadM SNP 0017.scaffold00052 520012 1 T C - ReadM SNP 0017.scaffold00052 521047 1 G A - Both SNP 0017.scaffold00052 521102 1 A G scaffold9942 ScafM SNP 0017.scaffold00052 521552 1 A T scaffold9942 Both SNP 0017.scaffold00052 522248 1 C A scaffold9942 Both SNP 0017.scaffold00052 522314 1 G C scaffold9942 ScafM INDEL 0017.scaffold00052 522339 4 TTTT .AAA scaffold9942 Both SNP 0017.scaffold00052 522500 1 C A scaffold9942 ScafM SNP 0017.scaffold00052 522624 1 T C scaffold9942 ScafM INDEL 0017.scaffold00052 522834 2 .. CA scaffold9942 ScafM SNP 0017.scaffold00052 524971 1 G A scaffold23138 ScafM INDEL 0017.scaffold00052 525029 2 CT .. scaffold23138 ScafM SNP 0017.scaffold00052 525035 1 A C scaffold23138 ScafM SNP 0017.scaffold00052 525087 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525112 2 CA TG scaffold23138 ScafM SNP 0017.scaffold00052 525145 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525161 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525170 1 A C scaffold23138 ScafM SNP 0017.scaffold00052 525193 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525200 2 CA TG scaffold23138 ScafM SNP 0017.scaffold00052 525224 2 CC GT scaffold23138 ScafM SNP 0017.scaffold00052 525230 1 A T scaffold23138 ScafM SNP 0017.scaffold00052 525249 1 C A scaffold23138 ScafM SNP 0017.scaffold00052 525260 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 525367 1 A G scaffold23138 ScafM INDEL 0017.scaffold00052 525396 1 . T scaffold23138 ScafM INDEL 0017.scaffold00052 525409 2 TG .. scaffold23138 ScafM SNP 0017.scaffold00052 525428 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 525475 1 G T scaffold23138 ScafM INDEL 0017.scaffold00052 525502 1 T . scaffold23138 ScafM SNP 0017.scaffold00052 525538 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525545 1 G T scaffold23138 ScafM SNP 0017.scaffold00052 525582 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525604 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 525618 1 T G scaffold23138 Both SNP 0017.scaffold00052 525654 1 A G scaffold23138 Both SNP 0017.scaffold00052 525667 1 A T scaffold23138 ScafM SNP 0017.scaffold00052 525679 1 T C scaffold23138 ScafM INDEL 0017.scaffold00052 525690 10 TTGTAGTTGG .......... scaffold23138 ScafM SNP 0017.scaffold00052 525738 1 G A scaffold23138 Both SNP 0017.scaffold00052 525758 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525764 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525770 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525803 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525884 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 525911 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525914 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 525925 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525952 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 525960 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 526006 1 A G scaffold23138 ScafM INDEL 0017.scaffold00052 526019 13 ............. TTATGCAACTGGG scaffold23138 ScafM SNP 0017.scaffold00052 526114 1 G C scaffold23138 ScafM INDEL 0017.scaffold00052 526119 1 T . scaffold23138 ScafM SNP 0017.scaffold00052 526161 1 C A scaffold23138 ScafM SNP 0017.scaffold00052 526173 1 A G scaffold23138 Both SNP 0017.scaffold00052 526220 1 G T scaffold23138 ScafM INDEL 0017.scaffold00052 526275 2 .. TT scaffold23138 ScafM SNP 0017.scaffold00052 526282 2 TT AA scaffold23138 ScafM INDEL 0017.scaffold00052 526305 4 .... CTAT scaffold23138 ScafM SNP 0017.scaffold00052 526354 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 526400 1 G T scaffold23138 ScafM SNP 0017.scaffold00052 526445 1 G T scaffold23138 ScafM SNP 0017.scaffold00052 526466 1 G T scaffold23138 Both SNP 0017.scaffold00052 526680 1 A G scaffold23138 Both SNP 0017.scaffold00052 526686 1 C T scaffold23138 ScafM INDEL 0017.scaffold00052 526784 2 TT .. scaffold23138 ScafM SNP 0017.scaffold00052 526871 1 T C scaffold23138 ScafM INDEL 0017.scaffold00052 526946 18 TGAAAACAGAAAATCAAA .................. scaffold23138 ScafM SNP 0017.scaffold00052 526981 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 526985 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 527036 1 T A scaffold23138 ScafM SNP 0017.scaffold00052 527039 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 527069 1 G A scaffold23138 Both SNP 0017.scaffold00052 527097 1 C T scaffold23138 Both SNP 0017.scaffold00052 527121 1 G T scaffold23138 Both SNP 0017.scaffold00052 527194 1 A C scaffold23138 Both SNP 0017.scaffold00052 527204 1 T G scaffold23138 Both SNP 0017.scaffold00052 527253 1 T G scaffold23138 ScafM SNP 0017.scaffold00052 527375 1 A T scaffold23138 Both SNP 0017.scaffold00052 527401 1 A G scaffold23138 Both SNP 0017.scaffold00052 527439 1 T G scaffold23138 ScafM SNP 0017.scaffold00052 527516 1 G A scaffold23138 Both SNP 0017.scaffold00052 527645 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 527701 1 C T scaffold23138 ScafM INDEL 0017.scaffold00052 527706 1 C . scaffold23138 ScafM SNP 0017.scaffold00052 527734 2 TA CG scaffold23138 ScafM SNP 0017.scaffold00052 527737 1 A G scaffold23138 Both INDEL 0017.scaffold00052 527777 1 C . scaffold23138 Both SNP 0017.scaffold00052 527787 1 G A scaffold23138 Both SNP 0017.scaffold00052 527820 1 T G scaffold23138 Both SNP 0017.scaffold00052 527871 1 G A scaffold23138 Both INDEL 0017.scaffold00052 527953 1 A . scaffold23138 ScafM SNP 0017.scaffold00052 527968 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 527978 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 528023 1 A C scaffold23138 ScafM SNP 0017.scaffold00052 528039 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 528042 1 G C scaffold23138 ScafM SNP 0017.scaffold00052 528056 1 G T scaffold23138 ScafM INDEL 0017.scaffold00052 528061 1 . A scaffold23138 ScafM SNP 0017.scaffold00052 528091 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 528096 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 528107 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 528110 2 GA AG scaffold23138 ScafM SNP 0017.scaffold00052 528150 1 A G scaffold23138 Both SNP 0017.scaffold00052 528172 1 C G scaffold23138 Both SNP 0017.scaffold00052 528215 1 G T scaffold23138 Both INDEL 0017.scaffold00052 528224 1 A . scaffold23138 Both SNP 0017.scaffold00052 528301 1 A C scaffold23138 Both SNP 0017.scaffold00052 528316 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 528356 1 C T scaffold23138 ReadM SNP 0017.scaffold00052 528379 1 C T - ScafM SNP 0017.scaffold00052 528486 1 T C scaffold23138 Both SNP 0017.scaffold00052 528559 1 G A scaffold23138 Both INDEL 0017.scaffold00052 528563 1 . T scaffold23138 ScafM SNP 0017.scaffold00052 528600 1 C A scaffold23138 ScafM SNP 0017.scaffold00052 528617 2 CT TA scaffold23138 ScafM SNP 0017.scaffold00052 528645 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 528656 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 528730 1 C G scaffold23138 ScafM SNP 0017.scaffold00052 528761 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 528774 1 G C scaffold23138 ScafM SNP 0017.scaffold00052 528784 1 T A scaffold23138 ScafM SNP 0017.scaffold00052 528821 1 G T scaffold23138 ScafM INDEL 0017.scaffold00052 528848 1 . T scaffold23138 ScafM SNP 0017.scaffold00052 528870 1 G T scaffold23138 ScafM SNP 0017.scaffold00052 529827 1 T G scaffold23138 ScafM SNP 0017.scaffold00052 529929 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 529953 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 529969 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 529977 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 530002 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 530053 1 G A scaffold23138 ScafM SNP 0017.scaffold00052 530068 2 AA GT scaffold23138 ScafM SNP 0017.scaffold00052 530079 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 530091 1 T A scaffold23138 ScafM SNP 0017.scaffold00052 530142 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 530151 1 C G scaffold23138 ScafM INDEL 0017.scaffold00052 530165 38 AACATTTTGAATTATATATGTTGGTTTTGTGCAACTGA ...................................... scaffold23138 ScafM SNP 0017.scaffold00052 530220 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 530243 1 A C scaffold23138 ScafM SNP 0017.scaffold00052 530300 1 A G scaffold23138 ScafM SNP 0017.scaffold00052 530421 1 A G scaffold23138 ScafM INDEL 0017.scaffold00052 530436 11 ........... GCCAAGTATCT scaffold23138 ScafM SNP 0017.scaffold00052 530460 1 T C scaffold23138 Both INDEL 0017.scaffold00052 530551 1 . G scaffold23138 ScafM SNP 0017.scaffold00052 530594 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 530643 1 C T scaffold23138 ScafM SNP 0017.scaffold00052 530753 1 T C scaffold23138 ScafM SNP 0017.scaffold00052 530782 1 G A scaffold23138 ScafM INDEL 0017.scaffold00052 530791 2 TA .. scaffold23138 ScafM SNP 0017.scaffold00052 530797 1 G T scaffold23138 ScafM SNP 0017.scaffold00052 532154 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 532196 1 T A scaffold2552 ScafM SNP 0017.scaffold00052 532202 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532265 1 A C scaffold2552 ScafM SNP 0017.scaffold00052 532272 1 C G scaffold2552 ScafM SNP 0017.scaffold00052 532280 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532321 2 GC AT scaffold2552 ScafM SNP 0017.scaffold00052 532353 1 G T scaffold2552 ScafM SNP 0017.scaffold00052 532362 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532375 1 C T scaffold2552 ScafM INDEL 0017.scaffold00052 532445 2 AA .. scaffold2552 ScafM SNP 0017.scaffold00052 532466 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532491 1 T G scaffold2552 ScafM SNP 0017.scaffold00052 532514 1 T A scaffold2552 ScafM SNP 0017.scaffold00052 532518 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532624 1 A G scaffold2552 ScafM INDEL 0017.scaffold00052 532665 1 . A scaffold2552 ScafM INDEL 0017.scaffold00052 532688 17 ................. CTTACTTCCTCCGTTCC scaffold2552 ScafM INDEL 0017.scaffold00052 532690 2 .. AA scaffold2552 ScafM INDEL 0017.scaffold00052 532691 2 .. AA scaffold2552 ScafM INDEL 0017.scaffold00052 532692 1 . T scaffold2552 ScafM INDEL 0017.scaffold00052 532694 10 .......... AACATTTCTC scaffold2552 ScafM INDEL 0017.scaffold00052 532695 5 ..... AAAAA scaffold2552 ScafM INDEL 0017.scaffold00052 532697 1 . C scaffold2552 ScafM INDEL 0017.scaffold00052 532698 6 ...... CACACA scaffold2552 ScafM INDEL 0017.scaffold00052 532699 5 ..... AAAAG scaffold2552 ScafM SNP 0017.scaffold00052 532704 1 T A scaffold2552 ScafM INDEL 0017.scaffold00052 532707 6 ...... GTTTCA scaffold2552 ScafM INDEL 0017.scaffold00052 532708 2 .. TT scaffold2552 ScafM INDEL 0017.scaffold00052 532712 2 .. TG scaffold2552 ScafM INDEL 0017.scaffold00052 532713 2 .. AA scaffold2552 ScafM INDEL 0017.scaffold00052 532714 11 ........... GGAGGAAGTAT scaffold2552 ScafM INDEL 0017.scaffold00052 532718 14 .............. TTAGATTAGTCATT scaffold2552 ScafM INDEL 0017.scaffold00052 532719 1 . G scaffold2552 ScafM INDEL 0017.scaffold00052 532720 4 .... ATAA scaffold2552 ScafM SNP 0017.scaffold00052 532730 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532732 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532768 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 532773 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 532802 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532808 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 532816 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532858 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 532863 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 532867 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532895 1 A G scaffold2552 ScafM INDEL 0017.scaffold00052 532906 1 . G scaffold2552 ScafM SNP 0017.scaffold00052 532942 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532965 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 532973 1 T G scaffold2552 ScafM SNP 0017.scaffold00052 532981 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 532992 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 533029 1 T G scaffold2552 ScafM SNP 0017.scaffold00052 533047 1 C A scaffold2552 ScafM INDEL 0017.scaffold00052 533054 3 ... CAC scaffold2552 ScafM INDEL 0017.scaffold00052 533067 4 .... CTTT scaffold2552 ScafM INDEL 0017.scaffold00052 533069 14 .............. CCCACCACTAGCAG scaffold2552 ScafM SNP 0017.scaffold00052 533081 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 533089 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 533116 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 533120 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 533127 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 533140 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 533150 1 A G scaffold2552 ReadM SNP 0017.scaffold00052 533596 1 G A - ReadM SNP 0017.scaffold00052 535696 1 A C - ReadM SNP 0017.scaffold00052 535703 1 G C - ReadM SNP 0017.scaffold00052 535773 1 G A - ReadM SNP 0017.scaffold00052 536023 1 A T - ScafM SNP 0017.scaffold00052 536614 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 536638 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 536677 1 G A scaffold2552 ScafM INDEL 0017.scaffold00052 536688 1 . T scaffold2552 ScafM SNP 0017.scaffold00052 536722 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 536725 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 536746 1 C A scaffold2552 ScafM SNP 0017.scaffold00052 536781 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 536801 1 A G scaffold2552 ScafM INDEL 0017.scaffold00052 536870 2 .C GA scaffold2552 ScafM INDEL 0017.scaffold00052 536905 6 ...... ATATAA scaffold2552 ScafM INDEL 0017.scaffold00052 536909 35 ................................... CAACACATAATTGATTTATGATAATAAAAACGAAC scaffold2552 ScafM SNP 0017.scaffold00052 537119 1 C T scaffold2552 ScafM INDEL 0017.scaffold00052 537150 5 AAAAA ...CT scaffold2552 ScafM SNP 0017.scaffold00052 537156 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 537160 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 537162 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 537171 2 CC GT scaffold2552 ScafM SNP 0017.scaffold00052 537182 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 537216 1 T C scaffold2552 ScafM INDEL 0017.scaffold00052 537226 10 .......... TTTGCTTTTT scaffold2552 ScafM SNP 0017.scaffold00052 537245 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 537255 1 C T scaffold2552 ScafM INDEL 0017.scaffold00052 537260 2 .T CC scaffold2552 ScafM SNP 0017.scaffold00052 537274 1 C T scaffold2552 ScafM INDEL 0017.scaffold00052 537285 3 TAC ... scaffold2552 ScafM INDEL 0017.scaffold00052 537291 7 TTTTTTT ....... scaffold2552 ScafM SNP 0017.scaffold00052 537310 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537321 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 537323 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537329 1 T C scaffold2552 ScafM INDEL 0017.scaffold00052 537360 1 A . scaffold2552 ScafM SNP 0017.scaffold00052 537362 1 A C scaffold2552 ScafM SNP 0017.scaffold00052 537407 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537410 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 537415 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537421 1 A T scaffold2552 ScafM INDEL 0017.scaffold00052 537430 2 .. AA scaffold2552 ScafM SNP 0017.scaffold00052 537436 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537444 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537450 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537472 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 537484 1 G A scaffold2552 ScafM INDEL 0017.scaffold00052 537487 1 . C scaffold2552 ScafM SNP 0017.scaffold00052 537493 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 537503 1 A T scaffold2552 ScafM INDEL 0017.scaffold00052 537508 1 . T scaffold2552 ScafM SNP 0017.scaffold00052 537516 1 G T scaffold2552 ScafM SNP 0017.scaffold00052 538609 1 C G scaffold17907 ScafM INDEL 0017.scaffold00052 538622 1 A . scaffold17907 ScafM SNP 0017.scaffold00052 538714 1 G A scaffold17907 ScafM SNP 0017.scaffold00052 538723 1 A T scaffold17907 ScafM INDEL 0017.scaffold00052 538740 4 GACG .... scaffold17907 ScafM SNP 0017.scaffold00052 538746 2 AT TG scaffold17907 ScafM SNP 0017.scaffold00052 538751 1 A G scaffold17907 ScafM SNP 0017.scaffold00052 538753 1 C T scaffold17907 ScafM SNP 0017.scaffold00052 538759 1 C A scaffold17907 ScafM SNP 0017.scaffold00052 538771 1 A C scaffold17907 ScafM SNP 0017.scaffold00052 538778 1 C T scaffold17907 ScafM SNP 0017.scaffold00052 538782 1 G A scaffold17907 ScafM SNP 0017.scaffold00052 538787 1 A C scaffold17907 ScafM SNP 0017.scaffold00052 538812 1 T A scaffold17907 ScafM SNP 0017.scaffold00052 538814 1 T C scaffold17907 ReadM SNP 0017.scaffold00052 539674 1 T C - ReadM SNP 0017.scaffold00052 539724 1 A C - ReadM INDEL 0017.scaffold00052 539792 1 . G - ReadM SNP 0017.scaffold00052 539814 1 A G - ReadM SNP 0017.scaffold00052 540107 1 A G - ReadM SNP 0017.scaffold00052 540168 1 G A - ReadM SNP 0017.scaffold00052 540243 1 G C - ReadM SNP 0017.scaffold00052 540303 1 G A - ReadM SNP 0017.scaffold00052 540330 1 G A - ReadM SNP 0017.scaffold00052 540337 1 C T - ReadM SNP 0017.scaffold00052 540396 1 A G - ReadM SNP 0017.scaffold00052 540490 1 A G - ReadM SNP 0017.scaffold00052 540494 1 C A - ReadM INDEL 0017.scaffold00052 540498 1 . G - ReadM SNP 0017.scaffold00052 540569 1 G A - ReadM SNP 0017.scaffold00052 540581 1 C G - ReadM SNP 0017.scaffold00052 540715 1 C A - ReadM SNP 0017.scaffold00052 540737 1 T C - ReadM SNP 0017.scaffold00052 540798 1 T A - ReadM SNP 0017.scaffold00052 540982 1 A T - ReadM SNP 0017.scaffold00052 541021 1 G T - ReadM SNP 0017.scaffold00052 541102 1 C T - ReadM SNP 0017.scaffold00052 541121 1 T A - ReadM SNP 0017.scaffold00052 541194 1 A G - ReadM SNP 0017.scaffold00052 541239 2 TT AG - ReadM SNP 0017.scaffold00052 541646 1 T C - ReadM SNP 0017.scaffold00052 541668 1 G T - ReadM SNP 0017.scaffold00052 541724 1 A G - ReadM SNP 0017.scaffold00052 541955 1 G T - ReadM SNP 0017.scaffold00052 541968 1 C T - ReadM SNP 0017.scaffold00052 542080 1 T A - ReadM SNP 0017.scaffold00052 542134 1 G A - ReadM SNP 0017.scaffold00052 542477 1 T C - ReadM SNP 0017.scaffold00052 542585 1 T C - ReadM SNP 0017.scaffold00052 542593 1 T C - ReadM SNP 0017.scaffold00052 542683 1 G C - ReadM SNP 0017.scaffold00052 542762 1 T C - ReadM SNP 0017.scaffold00052 542815 1 C T - ReadM SNP 0017.scaffold00052 542921 1 T A - ReadM SNP 0017.scaffold00052 542926 1 A G - ReadM SNP 0017.scaffold00052 543021 1 G A - ReadM SNP 0017.scaffold00052 543043 1 A C - ReadM SNP 0017.scaffold00052 543057 1 G T - ReadM SNP 0017.scaffold00052 543070 1 G C - ReadM SNP 0017.scaffold00052 543123 1 C T - ReadM SNP 0017.scaffold00052 543179 1 T G - ReadM SNP 0017.scaffold00052 543279 1 G A - ScafM SNP 0017.scaffold00052 544060 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 544094 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544128 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544147 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544154 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 544162 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 544168 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 544182 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 544207 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544213 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544222 1 C G scaffold2552 ScafM SNP 0017.scaffold00052 544242 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544248 3 CAC TCT scaffold2552 ScafM SNP 0017.scaffold00052 544254 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 544268 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544274 3 TTG CCA scaffold2552 ScafM SNP 0017.scaffold00052 544281 1 C A scaffold2552 ScafM SNP 0017.scaffold00052 544292 1 G A scaffold2552 ScafM SNP 0017.scaffold00052 544311 1 G T scaffold2552 ScafM SNP 0017.scaffold00052 544317 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544352 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544356 1 A G scaffold2552 ScafM SNP 0017.scaffold00052 544394 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544400 1 G A scaffold2552 ScafM INDEL 0017.scaffold00052 544405 1 T . scaffold2552 ScafM SNP 0017.scaffold00052 544415 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 544427 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544439 1 C A scaffold2552 ScafM INDEL 0017.scaffold00052 544468 28 ............................ TCTTCCGACCCAAGTAATCCGAAAGCCG scaffold2552 ScafM SNP 0017.scaffold00052 544477 2 TA CG scaffold2552 ScafM SNP 0017.scaffold00052 544482 1 C T scaffold2552 ScafM INDEL 0017.scaffold00052 544486 1 . C scaffold2552 ScafM SNP 0017.scaffold00052 544488 1 A T scaffold2552 ScafM SNP 0017.scaffold00052 544508 2 CT TG scaffold2552 ScafM SNP 0017.scaffold00052 544516 1 G C scaffold2552 ScafM SNP 0017.scaffold00052 544518 1 T C scaffold2552 ScafM SNP 0017.scaffold00052 544530 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544539 2 GT CC scaffold2552 ScafM SNP 0017.scaffold00052 544555 1 C T scaffold2552 ScafM SNP 0017.scaffold00052 544562 2 CA TG scaffold2552 ScafM SNP 0017.scaffold00052 545882 1 C T scaffold5628 ReadM SNP 0017.scaffold00052 548271 1 C T - ReadM INDEL 0017.scaffold00052 548304 1 C . - Both SNP 0017.scaffold00052 548391 1 T C scaffold1764 Both SNP 0017.scaffold00052 548457 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 548479 1 A T scaffold1764 ScafM INDEL 0017.scaffold00052 548487 2 GG .. scaffold1764 ScafM SNP 0017.scaffold00052 548495 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 548501 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 548529 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 548532 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 548535 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 548672 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 548694 1 A C scaffold1764 ScafM INDEL 0017.scaffold00052 548705 1 . G scaffold1764 ScafM SNP 0017.scaffold00052 548745 1 C T scaffold1764 ScafM INDEL 0017.scaffold00052 548783 3 AAC ... scaffold1764 ScafM INDEL 0017.scaffold00052 548788 2 TA .. scaffold1764 ScafM SNP 0017.scaffold00052 548807 1 T A scaffold1764 ScafM INDEL 0017.scaffold00052 548812 2 .. TT scaffold1764 ScafM SNP 0017.scaffold00052 548856 2 CA TG scaffold1764 ScafM SNP 0017.scaffold00052 548886 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 548910 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 548912 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 548915 2 CG TA scaffold1764 ScafM SNP 0017.scaffold00052 548970 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 548975 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 548986 1 A C scaffold1764 ScafM INDEL 0017.scaffold00052 548992 1 . C scaffold1764 ScafM SNP 0017.scaffold00052 548998 1 T C scaffold1764 ScafM INDEL 0017.scaffold00052 549011 4 .... TTAA scaffold1764 ScafM SNP 0017.scaffold00052 549023 2 CA TG scaffold1764 ScafM SNP 0017.scaffold00052 549085 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 549096 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 549101 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 549140 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 549210 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 549224 2 TA CG scaffold1764 ScafM INDEL 0017.scaffold00052 549272 1 . T scaffold1764 ScafM SNP 0017.scaffold00052 549291 2 AC GA scaffold1764 ScafM SNP 0017.scaffold00052 549359 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 549409 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 549414 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 549420 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 549428 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 549431 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 549433 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 550479 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 550483 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 550490 1 G C scaffold1764 ScafM SNP 0017.scaffold00052 550524 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 550531 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 550546 2 GC AG scaffold1764 ScafM SNP 0017.scaffold00052 550552 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 550559 1 G C scaffold1764 ScafM SNP 0017.scaffold00052 550577 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 550595 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 550623 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 550629 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 550634 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 550664 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 550692 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 550713 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 550732 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 550750 2 TA CG scaffold1764 ScafM SNP 0017.scaffold00052 550755 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 550767 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 550928 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 550930 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 550933 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 550945 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 550981 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 550983 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 551006 2 AA TG scaffold1764 Both SNP 0017.scaffold00052 551121 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 551139 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 551144 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 551162 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 551165 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 551171 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 551227 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 551232 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 551261 1 C G scaffold1764 ScafM INDEL 0017.scaffold00052 551289 1 T . scaffold1764 ScafM SNP 0017.scaffold00052 551308 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 551329 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 552141 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 552142 1 . A scaffold1764 ScafM SNP 0017.scaffold00052 552193 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 553790 1 T A scaffold1764 ReadM SNP 0017.scaffold00052 554049 1 T A - ReadM SNP 0017.scaffold00052 554083 1 A G - Both SNP 0017.scaffold00052 554222 1 T A scaffold1764 ReadM SNP 0017.scaffold00052 554272 1 C A - ReadM SNP 0017.scaffold00052 554298 1 C A - ReadM SNP 0017.scaffold00052 554317 1 A T - ScafM SNP 0017.scaffold00052 554467 2 CT TC scaffold1764 ScafM INDEL 0017.scaffold00052 554494 2 .C AT scaffold1764 ScafM SNP 0017.scaffold00052 554523 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 554535 1 C T scaffold1764 Both SNP 0017.scaffold00052 554598 1 T C scaffold1764 ReadM SNP 0017.scaffold00052 554729 1 C G - ReadM SNP 0017.scaffold00052 554737 1 G C - ReadM SNP 0017.scaffold00052 554822 1 C A - ScafM SNP 0017.scaffold00052 554944 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 554989 1 G T scaffold1764 ScafM INDEL 0017.scaffold00052 554995 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 555020 1 G A scaffold1764 ScafM INDEL 0017.scaffold00052 555044 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 555064 1 T C scaffold1764 ReadM SNP 0017.scaffold00052 555068 1 C A - ReadM SNP 0017.scaffold00052 555163 1 G A - ScafM SNP 0017.scaffold00052 556427 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 556431 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 556443 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 556455 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 556464 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 556500 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 556502 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 556526 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 556546 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 556556 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 556560 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 556581 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 556613 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 556630 1 C A scaffold1764 ScafM INDEL 0017.scaffold00052 556665 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 556669 1 G A scaffold1764 ReadM SNP 0017.scaffold00052 556707 1 A T - ReadM SNP 0017.scaffold00052 556771 1 C T - ReadM SNP 0017.scaffold00052 556808 1 G T - ScafM SNP 0017.scaffold00052 556894 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 556901 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 556938 1 C T scaffold1764 ReadM SNP 0017.scaffold00052 557101 1 G A - ReadM SNP 0017.scaffold00052 557130 1 A T - ReadM SNP 0017.scaffold00052 557189 1 G A - ReadM SNP 0017.scaffold00052 557217 1 T C - ReadM SNP 0017.scaffold00052 557227 1 A T - ScafM SNP 0017.scaffold00052 557386 2 GA TG scaffold1764 Both SNP 0017.scaffold00052 557422 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 557444 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 557474 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 557490 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 557529 1 G C scaffold1764 ScafM SNP 0017.scaffold00052 557536 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 557559 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 557578 1 A C scaffold1764 Both SNP 0017.scaffold00052 557607 1 T C scaffold1764 Both SNP 0017.scaffold00052 557635 1 G A scaffold1764 Both SNP 0017.scaffold00052 557648 1 A G scaffold1764 Both SNP 0017.scaffold00052 557701 1 G C scaffold1764 Both SNP 0017.scaffold00052 557729 1 T G scaffold1764 Both SNP 0017.scaffold00052 557745 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 557767 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 557779 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 557806 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 557813 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 557834 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 557879 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 557904 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 557906 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 557971 1 A G scaffold1764 ReadM SNP 0017.scaffold00052 559922 1 T C - ReadM INDEL 0017.scaffold00052 559931 1 . A - ReadM SNP 0017.scaffold00052 560018 1 T C - ReadM INDEL 0017.scaffold00052 560207 1 . A - ReadM SNP 0017.scaffold00052 560246 1 G T - ReadM SNP 0017.scaffold00052 560302 1 C T - ReadM INDEL 0017.scaffold00052 560352 1 T . - ReadM SNP 0017.scaffold00052 560405 1 A G - ReadM SNP 0017.scaffold00052 560410 1 C G - ReadM SNP 0017.scaffold00052 560440 1 A T - ReadM SNP 0017.scaffold00052 560498 1 C T - ReadM SNP 0017.scaffold00052 560543 1 G T - ReadM SNP 0017.scaffold00052 560736 1 G C - ReadM SNP 0017.scaffold00052 560769 1 A G - ReadM SNP 0017.scaffold00052 560932 1 A T - ScafM SNP 0017.scaffold00052 560971 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 561025 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 561028 1 G . scaffold1764 ScafM SNP 0017.scaffold00052 561040 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 561053 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 561065 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 561071 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 561075 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 561088 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 561429 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 561433 1 G A scaffold1764 ScafM INDEL 0017.scaffold00052 561455 2 AC .. scaffold1764 ScafM INDEL 0017.scaffold00052 561458 1 A . scaffold1764 ScafM INDEL 0017.scaffold00052 561461 12 GTTTTCTTACTT ............ scaffold1764 ScafM INDEL 0017.scaffold00052 561475 7 CAACGAC ....... scaffold1764 ScafM SNP 0017.scaffold00052 561501 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 561508 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 561521 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 561530 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 561551 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 561557 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 561560 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 561573 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 561605 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 561613 1 . T scaffold1764 ScafM SNP 0017.scaffold00052 561615 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 561648 1 A G scaffold1764 ReadM SNP 0017.scaffold00052 562284 1 T C - ReadM SNP 0017.scaffold00052 562406 1 A C - ReadM SNP 0017.scaffold00052 562414 1 A T - ScafM INDEL 0017.scaffold00052 562530 6 TACATT ...... scaffold1764 ScafM SNP 0017.scaffold00052 562547 1 G A scaffold1764 Both SNP 0017.scaffold00052 562571 1 A T scaffold1764 Both SNP 0017.scaffold00052 562574 1 C T scaffold1764 Both SNP 0017.scaffold00052 562642 1 A C scaffold1764 Both SNP 0017.scaffold00052 562757 1 G C scaffold1764 Both SNP 0017.scaffold00052 562784 1 A G scaffold1764 Both INDEL 0017.scaffold00052 562797 1 . T scaffold1764 ScafM SNP 0017.scaffold00052 562815 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 562818 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 562849 1 T C scaffold1764 ScafM INDEL 0017.scaffold00052 562855 3 AAA ... scaffold1764 ScafM INDEL 0017.scaffold00052 562866 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 562871 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 562933 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 562940 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 562963 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 562978 1 T C scaffold1764 ScafM INDEL 0017.scaffold00052 563006 1 . A scaffold1764 ScafM SNP 0017.scaffold00052 563040 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 563047 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 563054 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 563058 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 563084 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 563163 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 563245 2 CT TC scaffold1764 ScafM SNP 0017.scaffold00052 563269 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 564596 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564611 1 T C scaffold7066 ScafM SNP 0017.scaffold00052 564615 2 GG TA scaffold7066 ScafM SNP 0017.scaffold00052 564641 1 C G scaffold7066 ScafM SNP 0017.scaffold00052 564666 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564675 1 C A scaffold7066 ScafM SNP 0017.scaffold00052 564684 1 A C scaffold7066 ScafM SNP 0017.scaffold00052 564714 1 C T scaffold7066 ScafM SNP 0017.scaffold00052 564720 1 T C scaffold7066 ScafM SNP 0017.scaffold00052 564732 1 C T scaffold7066 ScafM SNP 0017.scaffold00052 564736 1 C T scaffold7066 ScafM SNP 0017.scaffold00052 564738 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564746 1 T G scaffold7066 ScafM INDEL 0017.scaffold00052 564755 1 T . scaffold7066 ScafM SNP 0017.scaffold00052 564778 1 G T scaffold7066 ScafM SNP 0017.scaffold00052 564784 1 T C scaffold7066 ScafM SNP 0017.scaffold00052 564789 1 C T scaffold7066 ScafM SNP 0017.scaffold00052 564793 1 A C scaffold7066 ScafM SNP 0017.scaffold00052 564809 1 T G scaffold7066 ScafM SNP 0017.scaffold00052 564812 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564838 1 G A scaffold7066 ScafM SNP 0017.scaffold00052 564840 1 T C scaffold7066 ScafM SNP 0017.scaffold00052 564842 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564845 1 A C scaffold7066 ScafM SNP 0017.scaffold00052 564859 1 C A scaffold7066 ScafM SNP 0017.scaffold00052 564879 1 T G scaffold7066 ScafM SNP 0017.scaffold00052 564885 1 G T scaffold7066 ScafM SNP 0017.scaffold00052 564913 1 T C scaffold7066 ScafM SNP 0017.scaffold00052 564951 1 C T scaffold7066 ScafM SNP 0017.scaffold00052 564987 1 A G scaffold7066 ScafM SNP 0017.scaffold00052 564994 1 G A scaffold7066 ScafM INDEL 0017.scaffold00052 564998 1 . A scaffold7066 ScafM INDEL 0017.scaffold00052 564999 2 .. AA scaffold7066 ScafM INDEL 0017.scaffold00052 565006 1 T . scaffold7066 ScafM INDEL 0017.scaffold00052 565070 1 . C scaffold7066 ScafM INDEL 0017.scaffold00052 565079 2 TT .. scaffold7066 ScafM SNP 0017.scaffold00052 567232 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 567239 1 A . scaffold1764 ScafM INDEL 0017.scaffold00052 567250 2 .. TA scaffold1764 ScafM SNP 0017.scaffold00052 567291 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 567303 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 567308 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 567384 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 567391 1 G C scaffold1764 Both SNP 0017.scaffold00052 567966 1 T C scaffold1764 Both SNP 0017.scaffold00052 567989 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 568113 2 AT TC scaffold1764 ScafM SNP 0017.scaffold00052 568140 1 G A scaffold1764 Both SNP 0017.scaffold00052 568251 1 A G scaffold1764 Both SNP 0017.scaffold00052 568268 1 C T scaffold1764 Both SNP 0017.scaffold00052 568410 1 T C scaffold1764 Both SNP 0017.scaffold00052 568461 1 T C scaffold1764 Both SNP 0017.scaffold00052 568478 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 568504 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 568508 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 568514 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 568525 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 568548 1 T C scaffold1764 ReadM SNP 0017.scaffold00052 568761 1 A G - ReadM SNP 0017.scaffold00052 568795 1 A G - ReadM SNP 0017.scaffold00052 568800 1 C T - ReadM SNP 0017.scaffold00052 568889 1 T C - ReadM SNP 0017.scaffold00052 568937 1 T G - ReadM SNP 0017.scaffold00052 568952 1 A G - ReadM SNP 0017.scaffold00052 569322 1 G A - ReadM SNP 0017.scaffold00052 569342 1 C A - ReadM SNP 0017.scaffold00052 569602 1 A G - ReadM SNP 0017.scaffold00052 569702 1 G A - ReadM SNP 0017.scaffold00052 569729 1 C G - ReadM SNP 0017.scaffold00052 569746 1 C T - ReadM INDEL 0017.scaffold00052 569807 1 . C - ReadM SNP 0017.scaffold00052 569904 1 A G - ReadM SNP 0017.scaffold00052 569918 1 G A - ReadM SNP 0017.scaffold00052 569921 1 G A - ReadM INDEL 0017.scaffold00052 569974 1 . C - ReadM SNP 0017.scaffold00052 570014 1 C T - ReadM SNP 0017.scaffold00052 570171 1 A G - ReadM SNP 0017.scaffold00052 570178 1 G C - ReadM SNP 0017.scaffold00052 570216 1 A T - ReadM SNP 0017.scaffold00052 570797 1 A T - ReadM SNP 0017.scaffold00052 570838 1 C A - ReadM SNP 0017.scaffold00052 570865 1 C A - ReadM SNP 0017.scaffold00052 570928 1 G A - ReadM SNP 0017.scaffold00052 571057 1 G A - ReadM SNP 0017.scaffold00052 571339 1 A G - ReadM SNP 0017.scaffold00052 571369 1 G A - ReadM SNP 0017.scaffold00052 571467 1 C T - ReadM SNP 0017.scaffold00052 572110 1 T G - ReadM INDEL 0017.scaffold00052 572360 1 . G - ReadM SNP 0017.scaffold00052 572429 1 A G - ReadM SNP 0017.scaffold00052 572520 1 A G - ReadM SNP 0017.scaffold00052 572524 1 G A - ReadM SNP 0017.scaffold00052 572535 1 A G - ReadM SNP 0017.scaffold00052 572584 1 A G - ReadM SNP 0017.scaffold00052 572603 1 T G - ReadM SNP 0017.scaffold00052 572644 1 G A - ReadM SNP 0017.scaffold00052 572988 1 A C - ReadM SNP 0017.scaffold00052 573019 1 A G - ReadM SNP 0017.scaffold00052 573093 1 A G - ReadM SNP 0017.scaffold00052 573097 1 G A - ReadM SNP 0017.scaffold00052 573326 1 T G - ReadM SNP 0017.scaffold00052 573351 1 A G - ReadM SNP 0017.scaffold00052 573443 1 A T - ReadM SNP 0017.scaffold00052 573507 1 G A - ReadM SNP 0017.scaffold00052 573553 1 A G - ReadM SNP 0017.scaffold00052 573557 1 A G - ReadM SNP 0017.scaffold00052 573603 1 G A - ReadM INDEL 0017.scaffold00052 573645 1 G . - ReadM SNP 0017.scaffold00052 573689 1 G A - ScafM INDEL 0017.scaffold00052 574425 1 A . scaffold1764 ScafM SNP 0017.scaffold00052 574431 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 574444 1 T A scaffold1764 ReadM SNP 0017.scaffold00052 574925 1 A G - ReadM INDEL 0017.scaffold00052 574990 1 T . - Both SNP 0017.scaffold00052 575283 1 C T scaffold1764 Both SNP 0017.scaffold00052 575294 1 G T scaffold1764 ScafM INDEL 0017.scaffold00052 575358 5 ATTAA ..... scaffold1764 Both INDEL 0017.scaffold00052 575495 2 .. AG scaffold1764 ScafM SNP 0017.scaffold00052 575524 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 575539 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 575574 1 C T scaffold1764 ScafM INDEL 0017.scaffold00052 575582 2 .. AC scaffold1764 Both INDEL 0017.scaffold00052 575659 2 AT .. scaffold1764 ScafM INDEL 0017.scaffold00052 575693 3 ATT ... scaffold1764 ScafM INDEL 0017.scaffold00052 575705 2 .C AA scaffold1764 ScafM INDEL 0017.scaffold00052 575718 2 .. TC scaffold1764 ScafM SNP 0017.scaffold00052 575841 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 575960 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 576042 1 T G scaffold1764 ScafM INDEL 0017.scaffold00052 576045 1 G . scaffold1764 ScafM INDEL 0017.scaffold00052 576048 2 AC .G scaffold1764 ScafM SNP 0017.scaffold00052 576051 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 576053 1 T . scaffold1764 ScafM SNP 0017.scaffold00052 576150 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 576669 1 T C scaffold14796 ScafM SNP 0017.scaffold00052 576703 1 G A scaffold14796 ScafM SNP 0017.scaffold00052 576707 1 C T scaffold14796 ScafM SNP 0017.scaffold00052 576762 1 A T scaffold14796 ScafM SNP 0017.scaffold00052 576773 1 G T scaffold14796 ScafM SNP 0017.scaffold00052 576796 1 T C scaffold14796 ScafM INDEL 0017.scaffold00052 576926 1 . A scaffold14796 ScafM SNP 0017.scaffold00052 576967 1 T C scaffold14796 ScafM SNP 0017.scaffold00052 577358 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 577665 1 A G scaffold1764 Both INDEL 0017.scaffold00052 577875 1 . T scaffold1764 ScafM SNP 0017.scaffold00052 577992 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 578003 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 578009 1 A G scaffold1764 Both SNP 0017.scaffold00052 578082 1 C T scaffold1764 Both SNP 0017.scaffold00052 578128 1 T A scaffold1764 Both SNP 0017.scaffold00052 578135 1 T C scaffold1764 ScafM INDEL 0017.scaffold00052 578173 1 T . scaffold1764 ScafM SNP 0017.scaffold00052 578245 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 579094 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 579131 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 579140 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 579155 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 579175 1 T G scaffold1764 Both SNP 0017.scaffold00052 579222 1 C T scaffold1764 ReadM SNP 0017.scaffold00052 579239 1 A G - ReadM SNP 0017.scaffold00052 579262 1 T G - ScafM SNP 0017.scaffold00052 579386 1 G C scaffold1764 ScafM SNP 0017.scaffold00052 579503 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 579511 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 579516 1 G T scaffold1764 Both SNP 0017.scaffold00052 579581 1 C A scaffold1764 Both SNP 0017.scaffold00052 579636 1 T C scaffold1764 Both SNP 0017.scaffold00052 579678 1 C A scaffold1764 Both SNP 0017.scaffold00052 579762 1 T C scaffold1764 Both SNP 0017.scaffold00052 579808 1 T C scaffold1764 Both SNP 0017.scaffold00052 579818 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 579826 2 TC AG scaffold1764 Both SNP 0017.scaffold00052 579901 1 T G scaffold1764 ScafM INDEL 0017.scaffold00052 579938 8 ........ GGTTATTG scaffold1764 Both SNP 0017.scaffold00052 580015 1 C G scaffold1764 Both SNP 0017.scaffold00052 580161 1 A G scaffold1764 ScafM INDEL 0017.scaffold00052 580186 1 . C scaffold1764 ScafM SNP 0017.scaffold00052 580188 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 580194 1 T C scaffold1764 ScafM INDEL 0017.scaffold00052 580233 2 CT .. scaffold1764 Both SNP 0017.scaffold00052 580272 1 A T scaffold1764 Both SNP 0017.scaffold00052 580308 1 A C scaffold1764 ReadM INDEL 0017.scaffold00052 580502 1 T . - ScafM INDEL 0017.scaffold00052 580502 2 TT .C scaffold1764 Both SNP 0017.scaffold00052 580581 1 C T scaffold1764 Both SNP 0017.scaffold00052 580616 1 A G scaffold1764 Both SNP 0017.scaffold00052 580692 1 G A scaffold1764 Both INDEL 0017.scaffold00052 580712 1 . A scaffold1764 Both SNP 0017.scaffold00052 580786 1 A G scaffold1764 Both INDEL 0017.scaffold00052 580919 1 G . scaffold1764 Both SNP 0017.scaffold00052 580956 1 T C scaffold1764 Both SNP 0017.scaffold00052 580972 1 G T scaffold1764 Both SNP 0017.scaffold00052 581004 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 581047 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 581049 1 G C scaffold1764 ReadM SNP 0017.scaffold00052 581142 1 G A - ScafM SNP 0017.scaffold00052 581283 2 TA CT scaffold1764 ScafM SNP 0017.scaffold00052 581340 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 581350 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 581353 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 581498 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 581533 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 581558 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 581581 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 581614 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 581624 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 583774 1 A T scaffold1764 ScafM SNP 0017.scaffold00052 583799 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 583842 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 583844 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 583925 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 583962 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 583966 1 A C scaffold1764 ScafM SNP 0017.scaffold00052 583988 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 584010 1 G T scaffold1764 ScafM SNP 0017.scaffold00052 584045 1 T G scaffold1764 ReadM SNP 0017.scaffold00052 584118 1 A G - ReadM SNP 0017.scaffold00052 584150 1 T C - ReadM SNP 0017.scaffold00052 584244 1 A G - ReadM SNP 0017.scaffold00052 584304 1 A T - ReadM SNP 0017.scaffold00052 584360 1 A C - ReadM SNP 0017.scaffold00052 584402 1 C T - ReadM SNP 0017.scaffold00052 584419 1 A G - ReadM SNP 0017.scaffold00052 584560 1 A T - ReadM SNP 0017.scaffold00052 584584 1 G C - ScafM SNP 0017.scaffold00052 584627 1 C T scaffold1764 Both SNP 0017.scaffold00052 584654 1 T C scaffold1764 Both SNP 0017.scaffold00052 584694 1 G T scaffold1764 ReadM SNP 0017.scaffold00052 584793 1 A T - ReadM SNP 0017.scaffold00052 584816 1 A C - ScafM SNP 0017.scaffold00052 584900 1 C T scaffold1764 Both SNP 0017.scaffold00052 584986 1 T A scaffold1764 Both SNP 0017.scaffold00052 585020 1 G A scaffold1764 Both SNP 0017.scaffold00052 585139 1 G T scaffold1764 Both SNP 0017.scaffold00052 585169 1 T C scaffold1764 Both SNP 0017.scaffold00052 585213 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 585231 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 585270 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 585292 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 585300 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 585320 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 585415 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 585446 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 585490 2 CA TG scaffold1764 ScafM SNP 0017.scaffold00052 585508 1 C A scaffold1764 ScafM INDEL 0017.scaffold00052 587852 1 T . scaffold38 ScafM SNP 0017.scaffold00052 587894 1 C T scaffold38 ScafM SNP 0017.scaffold00052 587913 1 T C scaffold38 ScafM SNP 0017.scaffold00052 588873 1 T A scaffold14820 ScafM SNP 0017.scaffold00052 590620 1 T G scaffold1764 ScafM INDEL 0017.scaffold00052 596628 5 GAGTA ..... scaffold1764 ScafM SNP 0017.scaffold00052 596696 1 C A scaffold1764 ScafM SNP 0017.scaffold00052 596707 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 596723 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 596726 1 T G scaffold1764 ScafM SNP 0017.scaffold00052 596814 1 G A scaffold1764 ScafM SNP 0017.scaffold00052 596877 1 C T scaffold1764 ScafM SNP 0017.scaffold00052 596927 1 T C scaffold1764 ScafM SNP 0017.scaffold00052 596941 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 596965 1 T A scaffold1764 ScafM SNP 0017.scaffold00052 597118 1 A G scaffold1764 ScafM SNP 0017.scaffold00052 597121 1 A T scaffold1764 ScafM INDEL 0017.scaffold00052 597133 3 TTT ... scaffold1764 ScafM SNP 0017.scaffold00052 597143 1 T G scaffold1764 Both SNP 0017.scaffold00052 597215 1 T C scaffold1764 Both SNP 0017.scaffold00052 597262 1 C A scaffold1764 Both SNP 0017.scaffold00052 597359 1 C G scaffold1764 ScafM SNP 0017.scaffold00052 597444 1 T G scaffold1764 ReadM SNP 0017.scaffold00052 599178 1 G A - ReadM SNP 0017.scaffold00052 599225 1 G A - ReadM SNP 0017.scaffold00052 599249 1 T C - ReadM SNP 0017.scaffold00052 599268 1 C T - ReadM SNP 0017.scaffold00052 599351 1 A T - ReadM SNP 0017.scaffold00052 599394 1 T C - ReadM SNP 0017.scaffold00052 599396 1 T G - ReadM INDEL 0017.scaffold00052 599486 2 AT .. - ScafM SNP 0017.scaffold00052 601839 1 C T scaffold18963 ScafM SNP 0017.scaffold00052 601901 1 T G scaffold18963 ScafM SNP 0017.scaffold00052 601918 1 C G scaffold18963 ReadM SNP 0017.scaffold00052 602036 1 C A - Both SNP 0017.scaffold00052 602090 1 C T scaffold18963 ScafM SNP 0017.scaffold00052 602157 1 T C scaffold18963 ScafM SNP 0017.scaffold00052 602194 1 T A scaffold18963 ScafM SNP 0017.scaffold00052 602196 1 C A scaffold18963 ScafM INDEL 0017.scaffold00052 602206 1 T . scaffold18963 ScafM INDEL 0017.scaffold00052 602488 3 ATA ... scaffold18963 Both SNP 0017.scaffold00052 602502 1 C T scaffold18963 ScafM SNP 0017.scaffold00052 602662 1 C A scaffold18963 ScafM SNP 0017.scaffold00052 602758 1 T G scaffold18963 ScafM INDEL 0017.scaffold00052 602784 8 GAATTAAA ........ scaffold18963 ScafM INDEL 0017.scaffold00052 602819 1 . A scaffold18963 ScafM SNP 0017.scaffold00052 602827 1 A T scaffold18963 ScafM SNP 0017.scaffold00052 603815 1 C A scaffold18963 Both INDEL 0017.scaffold00052 603885 1 . A scaffold18963 Both SNP 0017.scaffold00052 603952 1 T C scaffold18963 Both SNP 0017.scaffold00052 603959 1 A T scaffold18963 ReadM SNP 0017.scaffold00052 604034 1 A C - ReadM SNP 0017.scaffold00052 604146 1 G A - ReadM SNP 0017.scaffold00052 604450 1 T C - ReadM SNP 0017.scaffold00052 604480 1 A G - ReadM SNP 0017.scaffold00052 604563 1 G A - ReadM SNP 0017.scaffold00052 604566 1 A G - ReadM SNP 0017.scaffold00052 606383 1 A G - ReadM SNP 0017.scaffold00052 606395 1 T A - ReadM SNP 0017.scaffold00052 606398 1 A G - ReadM SNP 0017.scaffold00052 606494 1 A G - ReadM SNP 0017.scaffold00052 606529 1 T C - ReadM SNP 0017.scaffold00052 606543 1 C T - ScafM SNP 0018.scaffold00058 7284 1 C T scaffold11940 ScafM SNP 0018.scaffold00058 7297 1 A T scaffold11940 ScafM SNP 0018.scaffold00058 7312 1 T C scaffold11940 ScafM SNP 0018.scaffold00058 7330 1 C T scaffold11940 ScafM SNP 0018.scaffold00058 7366 1 T C scaffold11940 ScafM SNP 0018.scaffold00058 7461 2 AA TT scaffold11940 ScafM SNP 0018.scaffold00058 7513 1 C T scaffold11940 ScafM SNP 0018.scaffold00058 7536 1 G A scaffold11940 ScafM SNP 0018.scaffold00058 7541 1 T C scaffold11940 ScafM SNP 0018.scaffold00058 7574 1 C A scaffold11940 ScafM SNP 0018.scaffold00058 7591 1 G A scaffold11940 ScafM SNP 0018.scaffold00058 7608 1 A G scaffold11940 ScafM SNP 0018.scaffold00058 7618 1 A G scaffold11940 ScafM SNP 0018.scaffold00058 31227 1 T C scaffold5734 ScafM SNP 0018.scaffold00058 31231 1 A T scaffold5734 ScafM SNP 0018.scaffold00058 31258 1 C T scaffold5734 ScafM SNP 0018.scaffold00058 31260 1 A G scaffold5734 ScafM SNP 0018.scaffold00058 31262 1 A C scaffold5734 ScafM SNP 0018.scaffold00058 31267 1 A T scaffold5734 ScafM SNP 0018.scaffold00058 31270 1 G T scaffold5734 ScafM INDEL 0018.scaffold00058 31275 5 ..... ATAAA scaffold5734 ScafM INDEL 0018.scaffold00058 31278 2 .. CC scaffold5734 ScafM SNP 0018.scaffold00058 31289 1 A G scaffold5734 ScafM INDEL 0018.scaffold00058 31290 1 . G scaffold5734 ScafM SNP 0018.scaffold00058 31297 2 CA TG scaffold5734 ScafM SNP 0018.scaffold00058 31302 1 A T scaffold5734 ScafM SNP 0018.scaffold00058 31313 1 T C scaffold5734 ScafM SNP 0018.scaffold00058 31322 1 A G scaffold5734 ScafM SNP 0018.scaffold00058 31326 1 C G scaffold5734 ScafM SNP 0018.scaffold00058 31328 1 G A scaffold5734 ScafM SNP 0018.scaffold00058 31331 1 G T scaffold5734 ScafM SNP 0018.scaffold00058 31338 2 AG TA scaffold5734 ScafM SNP 0018.scaffold00058 31342 1 A G scaffold5734 ScafM INDEL 0018.scaffold00058 31351 1 A . scaffold5734 ScafM SNP 0018.scaffold00058 31373 1 A C scaffold5734 ScafM SNP 0018.scaffold00058 31375 1 T A scaffold5734 ScafM SNP 0018.scaffold00058 31382 1 G A scaffold5734 ScafM INDEL 0018.scaffold00058 31385 3 GAT ... scaffold5734 ScafM INDEL 0018.scaffold00058 31389 2 GG .. scaffold5734 ScafM INDEL 0018.scaffold00058 31392 1 T . scaffold5734 ScafM INDEL 0018.scaffold00058 31397 1 C . scaffold5734 ScafM INDEL 0018.scaffold00058 31401 2 TG .. scaffold5734 ScafM SNP 0018.scaffold00058 31405 1 G T scaffold5734 ScafM INDEL 0018.scaffold00058 31411 6 GAACAC .....T scaffold5734 ScafM INDEL 0018.scaffold00058 31432 4 .... AACA scaffold5734 ScafM SNP 0018.scaffold00058 31448 1 A C scaffold5734 ScafM SNP 0018.scaffold00058 31451 1 G A scaffold5734 ScafM SNP 0018.scaffold00058 31453 1 G A scaffold5734 ScafM SNP 0018.scaffold00058 31462 1 T C scaffold5734 ScafM SNP 0018.scaffold00058 33901 1 G A scaffold8558 ScafM INDEL 0018.scaffold00058 34006 2 .. AC scaffold8558 ScafM INDEL 0018.scaffold00058 34029 2 TT .. scaffold8558 ScafM SNP 0018.scaffold00058 34047 1 A G scaffold8558 ScafM SNP 0018.scaffold00058 34085 1 G A scaffold8558 ScafM SNP 0018.scaffold00058 34395 1 C T scaffold1291 ScafM SNP 0018.scaffold00058 34397 1 C T scaffold1291 ScafM SNP 0018.scaffold00058 34415 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 34419 1 A G scaffold1291 ScafM SNP 0018.scaffold00058 34425 1 A T scaffold1291 ScafM INDEL 0018.scaffold00058 34428 2 AA .. scaffold1291 ScafM SNP 0018.scaffold00058 34436 1 G C scaffold1291 ScafM SNP 0018.scaffold00058 34454 1 T G scaffold1291 ScafM SNP 0018.scaffold00058 34576 1 A G scaffold1291 ScafM SNP 0018.scaffold00058 34640 1 A T scaffold1291 ReadM SNP 0018.scaffold00058 35003 1 G A - ReadM SNP 0018.scaffold00058 35461 1 C A - ReadM INDEL 0018.scaffold00058 35671 1 T . - ReadM SNP 0018.scaffold00058 35782 1 G T - ReadM SNP 0018.scaffold00058 36069 1 C G - ReadM SNP 0018.scaffold00058 36165 1 C T - ReadM INDEL 0018.scaffold00058 36322 1 C . - Both SNP 0018.scaffold00058 36650 1 C A scaffold1291 Both SNP 0018.scaffold00058 36837 1 G A scaffold1291 Both SNP 0018.scaffold00058 37007 1 C T scaffold1291 Both SNP 0018.scaffold00058 37070 1 T G scaffold1291 Both SNP 0018.scaffold00058 37168 1 A G scaffold1291 ReadM SNP 0018.scaffold00058 37874 1 G A - ReadM SNP 0018.scaffold00058 37919 1 T C - ReadM SNP 0018.scaffold00058 38023 1 A T - ReadM SNP 0018.scaffold00058 38188 1 T A - ReadM SNP 0018.scaffold00058 38208 1 C G - ReadM INDEL 0018.scaffold00058 38272 1 . T - ScafM INDEL 0018.scaffold00058 38473 1 . T scaffold1291 ReadM SNP 0018.scaffold00058 38591 1 T C - ReadM SNP 0018.scaffold00058 38791 1 G A - ScafM SNP 0018.scaffold00058 38991 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 39013 1 T C scaffold1291 ReadM SNP 0018.scaffold00058 39331 1 C T - ReadM SNP 0018.scaffold00058 39466 1 T C - ReadM SNP 0018.scaffold00058 39552 1 A G - ScafM SNP 0018.scaffold00058 39689 1 G A scaffold1291 ScafM INDEL 0018.scaffold00058 39697 5 ..... TTTAA scaffold1291 ReadM INDEL 0018.scaffold00058 39788 1 . A - ReadM SNP 0018.scaffold00058 39809 1 G A - ReadM SNP 0018.scaffold00058 39931 1 G A - ReadM SNP 0018.scaffold00058 39938 1 A C - ReadM SNP 0018.scaffold00058 39947 1 T G - ReadM SNP 0018.scaffold00058 40026 1 G T - ReadM SNP 0018.scaffold00058 40216 1 G C - ScafM INDEL 0018.scaffold00058 40640 2 TT .. scaffold1291 ScafM INDEL 0018.scaffold00058 40737 1 T . scaffold1291 Both SNP 0018.scaffold00058 40930 1 G A scaffold1291 ScafM INDEL 0018.scaffold00058 40960 3 ... CTA scaffold1291 Both SNP 0018.scaffold00058 40996 1 A T scaffold1291 ReadM SNP 0018.scaffold00058 41068 1 T C - ReadM SNP 0018.scaffold00058 41298 1 G A - ReadM SNP 0018.scaffold00058 41313 1 T C - ReadM SNP 0018.scaffold00058 41349 1 C T - ReadM INDEL 0018.scaffold00058 41372 1 . T - Both SNP 0018.scaffold00058 41439 1 T C scaffold1291 Both INDEL 0018.scaffold00058 41480 1 . T scaffold1291 Both INDEL 0018.scaffold00058 41613 1 . C scaffold1291 ReadM SNP 0018.scaffold00058 41946 1 G A - ReadM SNP 0018.scaffold00058 41999 1 A G - ReadM SNP 0018.scaffold00058 42008 1 G C - Both SNP 0018.scaffold00058 42181 1 A T scaffold1291 Both INDEL 0018.scaffold00058 42644 1 . A scaffold1291 ScafM INDEL 0018.scaffold00058 42668 3 AGG ... scaffold1291 Both SNP 0018.scaffold00058 42706 1 G A scaffold1291 ReadM SNP 0018.scaffold00058 42884 1 C T - ReadM SNP 0018.scaffold00058 43163 1 G A - ScafM INDEL 0018.scaffold00058 43469 4 .... GATT scaffold1291 ScafM SNP 0018.scaffold00058 43513 1 G T scaffold1291 ScafM SNP 0018.scaffold00058 43535 2 GG TA scaffold1291 ScafM SNP 0018.scaffold00058 43544 1 A C scaffold1291 Both SNP 0018.scaffold00058 43621 1 T C scaffold1291 Both SNP 0018.scaffold00058 43638 1 T A scaffold1291 Both SNP 0018.scaffold00058 43659 1 A G scaffold1291 ReadM SNP 0018.scaffold00058 43794 1 A C - ReadM SNP 0018.scaffold00058 43808 1 C T - ReadM INDEL 0018.scaffold00058 43933 1 . T - ReadM SNP 0018.scaffold00058 44028 1 G A - ReadM SNP 0018.scaffold00058 44037 1 C T - Both SNP 0018.scaffold00058 44068 1 C A scaffold1291 ReadM SNP 0018.scaffold00058 44151 1 C T - ReadM SNP 0018.scaffold00058 44159 1 C G - ReadM SNP 0018.scaffold00058 44319 1 G A - ReadM SNP 0018.scaffold00058 44411 1 C T - ReadM SNP 0018.scaffold00058 44536 1 T C - Both SNP 0018.scaffold00058 44632 1 T C scaffold1291 Both SNP 0018.scaffold00058 44656 1 G A scaffold1291 Both SNP 0018.scaffold00058 44677 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 44708 1 G T scaffold1291 Both SNP 0018.scaffold00058 44773 1 G A scaffold1291 ReadM SNP 0018.scaffold00058 44868 1 A G - ReadM SNP 0018.scaffold00058 44960 1 A G - ReadM SNP 0018.scaffold00058 44974 1 T C - ReadM SNP 0018.scaffold00058 45154 1 G C - ReadM SNP 0018.scaffold00058 45298 1 A G - ScafM INDEL 0018.scaffold00058 45427 5 TTAAA ..... scaffold1291 ScafM SNP 0018.scaffold00058 45476 1 G C scaffold1291 ScafM SNP 0018.scaffold00058 45482 1 A G scaffold1291 ScafM INDEL 0018.scaffold00058 45524 2 .. TT scaffold1291 ReadM INDEL 0018.scaffold00058 45550 2 .. TT - ScafM INDEL 0018.scaffold00058 45640 6 AAGGGG .....C scaffold1291 ScafM INDEL 0018.scaffold00058 45698 2 AA .. scaffold1291 ReadM SNP 0018.scaffold00058 45777 1 T A - ReadM SNP 0018.scaffold00058 45780 1 T C - ReadM SNP 0018.scaffold00058 45847 1 A T - Both SNP 0018.scaffold00058 45949 1 G A scaffold1291 Both SNP 0018.scaffold00058 45982 1 G A scaffold1291 Both SNP 0018.scaffold00058 46016 1 C G scaffold1291 Both SNP 0018.scaffold00058 46068 2 CG TA scaffold1291 Both SNP 0018.scaffold00058 46139 1 T C scaffold1291 Both SNP 0018.scaffold00058 46214 1 A G scaffold1291 ScafM SNP 0018.scaffold00058 46247 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 46254 1 A T scaffold1291 ScafM INDEL 0018.scaffold00058 46258 9 CGACCTATT ......... scaffold1291 ScafM SNP 0018.scaffold00058 46278 1 A G scaffold1291 Both SNP 0018.scaffold00058 46419 1 C T scaffold1291 Both SNP 0018.scaffold00058 46424 1 T G scaffold1291 Both SNP 0018.scaffold00058 46449 1 G T scaffold1291 Both INDEL 0018.scaffold00058 46631 1 G . scaffold1291 Both SNP 0018.scaffold00058 46675 1 A G scaffold1291 Both SNP 0018.scaffold00058 46685 1 T G scaffold1291 ReadM SNP 0018.scaffold00058 46955 1 C A - ReadM SNP 0018.scaffold00058 46999 1 A G - ReadM SNP 0018.scaffold00058 47007 1 G A - ReadM SNP 0018.scaffold00058 47020 1 T C - Both SNP 0018.scaffold00058 47124 1 G T scaffold1291 Both INDEL 0018.scaffold00058 47149 1 . T scaffold1291 Both SNP 0018.scaffold00058 47167 1 G C scaffold1291 ReadM SNP 0018.scaffold00058 47312 1 C A - ReadM SNP 0018.scaffold00058 47361 1 T C - ReadM SNP 0018.scaffold00058 47460 1 G A - ReadM SNP 0018.scaffold00058 47481 1 T A - ReadM SNP 0018.scaffold00058 47516 1 T C - ReadM SNP 0018.scaffold00058 47720 1 A G - ReadM SNP 0018.scaffold00058 47768 1 G T - ReadM SNP 0018.scaffold00058 47885 1 T G - ReadM SNP 0018.scaffold00058 48085 1 C T - ReadM SNP 0018.scaffold00058 48142 1 T C - ReadM SNP 0018.scaffold00058 48159 1 A T - ReadM SNP 0018.scaffold00058 48250 1 G A - Both SNP 0018.scaffold00058 48457 1 C A scaffold1291 ScafM SNP 0018.scaffold00058 48563 1 A T scaffold1291 ReadM SNP 0018.scaffold00058 48859 1 A G - ReadM SNP 0018.scaffold00058 49003 1 A G - ReadM SNP 0018.scaffold00058 49037 1 A C - ReadM SNP 0018.scaffold00058 49082 1 A G - ReadM SNP 0018.scaffold00058 49103 1 A G - Both SNP 0018.scaffold00058 49223 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 49334 1 T A scaffold1291 ReadM SNP 0018.scaffold00058 49345 1 G T - ReadM SNP 0018.scaffold00058 49354 1 A G - ReadM SNP 0018.scaffold00058 49385 1 C T - ReadM SNP 0018.scaffold00058 49579 1 A T - ReadM SNP 0018.scaffold00058 49637 1 T C - ReadM SNP 0018.scaffold00058 49714 1 A C - ReadM SNP 0018.scaffold00058 49766 1 T A - ReadM SNP 0018.scaffold00058 49811 1 T C - ScafM SNP 0018.scaffold00058 49896 2 GC TT scaffold1291 ScafM SNP 0018.scaffold00058 49915 1 C T scaffold1291 ScafM SNP 0018.scaffold00058 49919 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 49923 1 A G scaffold1291 ScafM SNP 0018.scaffold00058 49925 1 T A scaffold1291 Both SNP 0018.scaffold00058 49944 1 C T scaffold1291 ReadM SNP 0018.scaffold00058 50061 1 T G - ReadM SNP 0018.scaffold00058 50099 1 G A - ReadM SNP 0018.scaffold00058 50130 1 G T - ReadM SNP 0018.scaffold00058 50153 1 C G - ReadM SNP 0018.scaffold00058 50232 1 G A - ReadM SNP 0018.scaffold00058 50263 1 T A - ReadM SNP 0018.scaffold00058 50355 1 T C - ReadM SNP 0018.scaffold00058 50414 1 T C - ReadM SNP 0018.scaffold00058 50449 1 T A - ReadM SNP 0018.scaffold00058 50476 1 C T - ReadM SNP 0018.scaffold00058 50509 1 G T - ReadM SNP 0018.scaffold00058 50546 1 A G - ReadM SNP 0018.scaffold00058 50649 1 T G - ReadM SNP 0018.scaffold00058 50698 1 G A - Both SNP 0018.scaffold00058 50742 1 A T scaffold1291 Both SNP 0018.scaffold00058 50819 1 T C scaffold1291 Both SNP 0018.scaffold00058 50897 1 A C scaffold1291 ReadM SNP 0018.scaffold00058 50937 1 T C - Both SNP 0018.scaffold00058 51045 1 A T scaffold1291 Both SNP 0018.scaffold00058 51071 1 A G scaffold1291 Both SNP 0018.scaffold00058 51102 1 A T scaffold1291 Both SNP 0018.scaffold00058 51124 1 C T scaffold1291 Both SNP 0018.scaffold00058 51187 1 C T scaffold1291 Both SNP 0018.scaffold00058 51242 1 C T scaffold1291 Both SNP 0018.scaffold00058 51280 1 T C scaffold1291 Both SNP 0018.scaffold00058 51282 1 G A scaffold1291 ReadM SNP 0018.scaffold00058 51378 1 A G - ReadM SNP 0018.scaffold00058 51389 1 A G - ReadM SNP 0018.scaffold00058 51411 1 G A - ReadM SNP 0018.scaffold00058 51437 1 T A - ReadM SNP 0018.scaffold00058 51443 1 A C - ReadM INDEL 0018.scaffold00058 51505 1 T . - ReadM SNP 0018.scaffold00058 51593 1 C G - ReadM SNP 0018.scaffold00058 51869 1 G A - ReadM SNP 0018.scaffold00058 51883 1 C A - ReadM SNP 0018.scaffold00058 51902 1 C G - ReadM SNP 0018.scaffold00058 51923 2 TT GA - ReadM SNP 0018.scaffold00058 52032 1 T A - ReadM SNP 0018.scaffold00058 52097 1 C T - ReadM SNP 0018.scaffold00058 52113 1 T C - ReadM SNP 0018.scaffold00058 52122 1 T C - ReadM SNP 0018.scaffold00058 52274 1 T C - ReadM INDEL 0018.scaffold00058 52302 1 . T - ReadM SNP 0018.scaffold00058 52336 1 T C - ReadM SNP 0018.scaffold00058 52487 1 G A - ReadM SNP 0018.scaffold00058 52637 1 C T - ReadM INDEL 0018.scaffold00058 52661 1 . A - ReadM SNP 0018.scaffold00058 52743 1 T C - ReadM SNP 0018.scaffold00058 52845 1 A T - ReadM SNP 0018.scaffold00058 52935 1 T G - ReadM SNP 0018.scaffold00058 52943 1 T C - ReadM SNP 0018.scaffold00058 53016 1 T A - ReadM SNP 0018.scaffold00058 53067 1 G C - ReadM SNP 0018.scaffold00058 53089 1 T C - ReadM SNP 0018.scaffold00058 53109 1 C A - ReadM SNP 0018.scaffold00058 53148 1 A G - ReadM SNP 0018.scaffold00058 53159 1 T C - ReadM SNP 0018.scaffold00058 53165 1 A T - ReadM SNP 0018.scaffold00058 53249 1 G A - ReadM SNP 0018.scaffold00058 53302 1 G A - ReadM SNP 0018.scaffold00058 53340 1 T C - ReadM SNP 0018.scaffold00058 53348 1 T C - ReadM INDEL 0018.scaffold00058 53397 1 . G - ReadM SNP 0018.scaffold00058 53425 1 G A - ReadM SNP 0018.scaffold00058 53438 1 G A - ReadM SNP 0018.scaffold00058 53604 1 G A - ReadM SNP 0018.scaffold00058 53629 1 G A - ReadM SNP 0018.scaffold00058 53653 1 A G - ReadM SNP 0018.scaffold00058 53683 1 C A - ReadM SNP 0018.scaffold00058 53789 1 G A - ReadM SNP 0018.scaffold00058 53816 1 T C - ReadM SNP 0018.scaffold00058 53868 1 G A - ReadM SNP 0018.scaffold00058 53886 1 A G - ReadM SNP 0018.scaffold00058 53983 1 G A - ReadM SNP 0018.scaffold00058 54017 1 C A - ReadM SNP 0018.scaffold00058 54054 1 G T - ReadM SNP 0018.scaffold00058 54087 1 G A - ReadM SNP 0018.scaffold00058 54131 1 C T - ReadM SNP 0018.scaffold00058 54160 1 T G - ReadM SNP 0018.scaffold00058 54181 1 C G - ReadM SNP 0018.scaffold00058 54242 1 A G - ReadM SNP 0018.scaffold00058 54291 1 T G - ReadM SNP 0018.scaffold00058 54416 1 C G - ReadM SNP 0018.scaffold00058 54433 1 T C - ReadM SNP 0018.scaffold00058 54443 1 C T - ReadM SNP 0018.scaffold00058 54452 1 A C - ReadM SNP 0018.scaffold00058 54556 1 G A - ReadM SNP 0018.scaffold00058 54691 1 C A - ReadM SNP 0018.scaffold00058 54900 1 A G - ReadM SNP 0018.scaffold00058 54930 1 G A - ReadM INDEL 0018.scaffold00058 54951 1 C . - ReadM SNP 0018.scaffold00058 55021 1 A G - Both SNP 0018.scaffold00058 55107 1 G C scaffold1291 Both SNP 0018.scaffold00058 55153 1 A G scaffold1291 Both SNP 0018.scaffold00058 55166 1 A C scaffold1291 Both SNP 0018.scaffold00058 55361 1 A G scaffold1291 Both SNP 0018.scaffold00058 55383 1 T A scaffold1291 Both SNP 0018.scaffold00058 55389 1 A G scaffold1291 ScafM INDEL 0018.scaffold00058 55461 4 TAGC .... scaffold1291 Both SNP 0018.scaffold00058 55586 1 A C scaffold1291 ScafM SNP 0018.scaffold00058 55748 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 55753 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 55756 1 C G scaffold1291 ScafM SNP 0018.scaffold00058 55776 1 T A scaffold1291 ScafM INDEL 0018.scaffold00058 55961 1 . T scaffold1291 ReadM SNP 0018.scaffold00058 56039 1 G A - ScafM SNP 0018.scaffold00058 56643 1 A G scaffold1291 ScafM SNP 0018.scaffold00058 56677 1 A T scaffold1291 Both SNP 0018.scaffold00058 56732 1 A G scaffold1291 Both SNP 0018.scaffold00058 56765 1 A C scaffold1291 Both SNP 0018.scaffold00058 56818 1 T G scaffold1291 Both SNP 0018.scaffold00058 56827 1 A G scaffold1291 Both SNP 0018.scaffold00058 56847 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 56891 1 T A scaffold1291 Both SNP 0018.scaffold00058 56898 1 C A scaffold1291 Both SNP 0018.scaffold00058 56933 1 C T scaffold1291 ScafM SNP 0018.scaffold00058 57005 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 57025 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 57048 1 C T scaffold1291 ReadM SNP 0018.scaffold00058 57220 1 A G - ReadM INDEL 0018.scaffold00058 57236 1 A . - ReadM SNP 0018.scaffold00058 57381 1 T C - ScafM SNP 0018.scaffold00058 57551 1 C G scaffold1291 ReadM SNP 0018.scaffold00058 57639 1 G A - ReadM SNP 0018.scaffold00058 57807 1 C T - ReadM SNP 0018.scaffold00058 57823 1 C T - ReadM SNP 0018.scaffold00058 57874 1 C T - Both SNP 0018.scaffold00058 58248 1 T G scaffold1291 Both INDEL 0018.scaffold00058 58516 2 TT .. scaffold1291 Both SNP 0018.scaffold00058 58561 1 T C scaffold1291 Both SNP 0018.scaffold00058 58595 1 G A scaffold1291 Both SNP 0018.scaffold00058 58666 1 C T scaffold1291 Both SNP 0018.scaffold00058 58727 1 G T scaffold1291 ScafM SNP 0018.scaffold00058 58750 1 G A scaffold1291 ScafM SNP 0018.scaffold00058 58752 1 A T scaffold1291 ScafM SNP 0018.scaffold00058 58773 1 T C scaffold1291 ScafM SNP 0018.scaffold00058 58775 1 T A scaffold1291 ScafM SNP 0018.scaffold00058 58778 1 G C scaffold1291 ScafM SNP 0018.scaffold00058 58782 1 T A scaffold1291 ScafM SNP 0018.scaffold00058 58822 1 C T scaffold1291 Both SNP 0018.scaffold00058 58849 1 A T scaffold1291 Both SNP 0018.scaffold00058 58854 1 G A scaffold1291 Both SNP 0018.scaffold00058 58889 1 C G scaffold1291 Both SNP 0018.scaffold00058 60109 1 G A scaffold1291 Both SNP 0018.scaffold00058 60370 1 G T scaffold1291 Both SNP 0018.scaffold00058 60725 1 C T scaffold1291 ScafM SNP 0018.scaffold00058 60946 1 T A scaffold1291 Both SNP 0018.scaffold00058 61983 1 C T scaffold1291 Both SNP 0018.scaffold00058 61986 1 C G scaffold1291 Both SNP 0018.scaffold00058 62196 1 C T scaffold1291 Both INDEL 0018.scaffold00058 62471 1 . A scaffold1291 Both SNP 0018.scaffold00058 62502 1 C T scaffold1291 Both SNP 0018.scaffold00058 62715 1 A T scaffold1291 Both SNP 0018.scaffold00058 62740 1 T C scaffold1291 Both SNP 0018.scaffold00058 62919 1 T C scaffold1291 Both SNP 0018.scaffold00058 62931 1 G C scaffold1291 Both SNP 0018.scaffold00058 62945 1 C T scaffold1291 Both SNP 0018.scaffold00058 63045 1 G A scaffold1291 ReadM SNP 0018.scaffold00058 66976 1 G T - ReadM SNP 0018.scaffold00058 67165 1 C T - ReadM SNP 0018.scaffold00058 67256 1 C T - ReadM SNP 0018.scaffold00058 67273 1 C T - ReadM SNP 0018.scaffold00058 67333 1 G T - ReadM SNP 0018.scaffold00058 67505 1 T A - ReadM SNP 0018.scaffold00058 70459 1 T C - ReadM SNP 0018.scaffold00058 70492 1 T C - ReadM SNP 0018.scaffold00058 70530 1 C G - ReadM SNP 0018.scaffold00058 70546 1 G A - ReadM SNP 0018.scaffold00058 70607 1 G A - ReadM SNP 0018.scaffold00058 70821 1 G A - ReadM SNP 0018.scaffold00058 70838 1 A G - ReadM SNP 0018.scaffold00058 70932 1 C T - ReadM SNP 0018.scaffold00058 71047 1 C T - ReadM SNP 0018.scaffold00058 74429 1 T C - ReadM SNP 0018.scaffold00058 74547 1 A G - ReadM SNP 0018.scaffold00058 74874 1 A T - ReadM SNP 0018.scaffold00058 74913 1 G A - Both SNP 0018.scaffold00058 75837 1 T A scaffold1291 ReadM SNP 0018.scaffold00058 75997 1 C G - ReadM SNP 0018.scaffold00058 76019 1 T C - ReadM SNP 0018.scaffold00058 76061 1 A G - ReadM SNP 0018.scaffold00058 76188 1 T C - ReadM SNP 0018.scaffold00058 76215 1 T A - ReadM SNP 0018.scaffold00058 76267 1 T C - ReadM SNP 0018.scaffold00058 76327 1 T G - ReadM SNP 0018.scaffold00058 76382 1 A G - ReadM SNP 0018.scaffold00058 76399 1 C A - ReadM SNP 0018.scaffold00058 76815 1 C T - ReadM SNP 0018.scaffold00058 76839 1 C A - ReadM SNP 0018.scaffold00058 76952 1 G T - ReadM SNP 0018.scaffold00058 76967 1 C T - ReadM SNP 0018.scaffold00058 77145 1 G C - ReadM SNP 0018.scaffold00058 77217 1 T C - ReadM SNP 0018.scaffold00058 77391 1 A G - ReadM SNP 0018.scaffold00058 77449 1 G A - ReadM SNP 0018.scaffold00058 77570 1 A C - ReadM SNP 0018.scaffold00058 77596 1 A C - Both SNP 0018.scaffold00058 77762 1 T C scaffold1291 Both INDEL 0018.scaffold00058 77814 2 TG .. scaffold1291 ReadM SNP 0018.scaffold00058 78059 1 T C - ReadM INDEL 0018.scaffold00058 78099 1 T . - ReadM SNP 0018.scaffold00058 78242 1 G A - ReadM SNP 0018.scaffold00058 78568 1 C T - ReadM SNP 0018.scaffold00058 78762 1 T G - ReadM SNP 0018.scaffold00058 79098 1 C T - ReadM SNP 0018.scaffold00058 80446 1 G A - ReadM SNP 0018.scaffold00058 80769 1 T G - ReadM SNP 0018.scaffold00058 80779 1 G A - ReadM SNP 0018.scaffold00058 80817 1 C T - ReadM SNP 0018.scaffold00058 81422 1 C T - ReadM SNP 0018.scaffold00058 81818 1 G T - ReadM SNP 0018.scaffold00058 82266 1 C T - ReadM SNP 0018.scaffold00058 82303 1 A G - ReadM SNP 0018.scaffold00058 82463 1 G T - ReadM SNP 0018.scaffold00058 82490 1 G A - ReadM SNP 0018.scaffold00058 82521 1 T C - ReadM SNP 0018.scaffold00058 82529 1 G T - ReadM SNP 0018.scaffold00058 82609 1 G C - ReadM SNP 0018.scaffold00058 82778 1 C A - ReadM SNP 0018.scaffold00058 82835 1 C A - ReadM SNP 0018.scaffold00058 82880 1 A G - ReadM SNP 0018.scaffold00058 83402 1 T C - ReadM SNP 0018.scaffold00058 83696 1 T C - ReadM SNP 0018.scaffold00058 84040 1 C A - ReadM SNP 0018.scaffold00058 84270 1 G A - ReadM SNP 0018.scaffold00058 85038 1 T C - ReadM SNP 0018.scaffold00058 85151 1 G A - ReadM SNP 0018.scaffold00058 85262 1 A G - ReadM SNP 0018.scaffold00058 85443 1 C A - ReadM SNP 0018.scaffold00058 86497 1 C T - ReadM SNP 0018.scaffold00058 86868 1 A C - ReadM SNP 0018.scaffold00058 86872 1 T C - ReadM SNP 0018.scaffold00058 86950 1 A G - ReadM SNP 0018.scaffold00058 86970 1 C A - ReadM SNP 0018.scaffold00058 87046 1 A G - ReadM SNP 0018.scaffold00058 87120 1 T C - ReadM SNP 0018.scaffold00058 87163 1 T G - ReadM SNP 0018.scaffold00058 87403 1 G A - ReadM SNP 0018.scaffold00058 87481 1 C T - ReadM INDEL 0018.scaffold00058 87527 2 TG .. - ReadM SNP 0018.scaffold00058 87596 1 A G - ReadM SNP 0018.scaffold00058 87608 1 A C - ReadM SNP 0018.scaffold00058 87779 1 C T - ReadM SNP 0018.scaffold00058 87978 1 C A - ReadM SNP 0018.scaffold00058 88069 1 A G - ReadM INDEL 0018.scaffold00058 88372 1 C . - ReadM SNP 0018.scaffold00058 89579 1 C A - ReadM SNP 0018.scaffold00058 90026 1 G C - ReadM SNP 0018.scaffold00058 90405 1 T C - ReadM SNP 0018.scaffold00058 90453 1 T C - ReadM SNP 0018.scaffold00058 90618 1 A G - ReadM SNP 0018.scaffold00058 90806 1 A T - ReadM SNP 0018.scaffold00058 90872 1 A C - ReadM SNP 0018.scaffold00058 91305 1 A G - ReadM SNP 0018.scaffold00058 91397 1 C A - ReadM SNP 0018.scaffold00058 91696 1 A G - ReadM SNP 0018.scaffold00058 91699 1 T C - ReadM SNP 0018.scaffold00058 91913 1 C G - ReadM SNP 0018.scaffold00058 91939 1 G A - ReadM SNP 0018.scaffold00058 92103 1 G A - ReadM SNP 0018.scaffold00058 92200 1 G A - ReadM SNP 0018.scaffold00058 92206 1 G A - ReadM SNP 0018.scaffold00058 92233 1 G A - ReadM INDEL 0018.scaffold00058 92386 1 T . - ReadM SNP 0018.scaffold00058 92779 1 C T - ReadM SNP 0018.scaffold00058 93860 1 G C - ReadM SNP 0018.scaffold00058 93996 1 T C - ReadM SNP 0018.scaffold00058 94182 1 C T - ReadM SNP 0018.scaffold00058 94255 1 C T - ReadM SNP 0018.scaffold00058 94395 1 C A - ReadM SNP 0018.scaffold00058 94402 1 T G - ReadM SNP 0018.scaffold00058 94449 1 A G - ReadM SNP 0018.scaffold00058 94481 1 T C - ReadM SNP 0018.scaffold00058 94510 1 A G - ScafM INDEL 0018.scaffold00058 94983 2 .. TT scaffold1291 ScafM SNP 0018.scaffold00058 96823 1 T A scaffold1291 Both SNP 0018.scaffold00058 97046 1 G T scaffold1291 ReadM SNP 0018.scaffold00058 97306 1 T G - ReadM SNP 0018.scaffold00058 97311 1 A G - ReadM SNP 0018.scaffold00058 97534 1 T C - ReadM SNP 0018.scaffold00058 97613 1 T C - ReadM SNP 0018.scaffold00058 97632 1 G A - ReadM INDEL 0018.scaffold00058 97670 1 . A - ReadM SNP 0018.scaffold00058 97831 1 T G - ReadM SNP 0018.scaffold00058 98207 1 C T - ReadM SNP 0018.scaffold00058 98255 1 C G - ReadM SNP 0018.scaffold00058 98269 1 G A - ReadM SNP 0018.scaffold00058 98395 1 T A - ReadM SNP 0018.scaffold00058 98498 1 G A - ReadM SNP 0018.scaffold00058 98506 1 A C - ReadM SNP 0018.scaffold00058 98510 1 A T - ReadM SNP 0018.scaffold00058 98634 1 A G - ReadM SNP 0018.scaffold00058 98695 1 G A - ReadM SNP 0018.scaffold00058 98699 1 T C - ReadM SNP 0018.scaffold00058 98772 1 C T - ReadM SNP 0018.scaffold00058 99275 1 C T - ReadM SNP 0018.scaffold00058 99366 1 C T - ReadM SNP 0018.scaffold00058 99380 1 G A - ReadM SNP 0018.scaffold00058 99414 1 A C - ReadM SNP 0018.scaffold00058 99445 1 A G - ReadM SNP 0018.scaffold00058 100161 1 A G - ReadM SNP 0018.scaffold00058 100263 1 T C - ReadM SNP 0018.scaffold00058 100507 1 G C - ReadM SNP 0018.scaffold00058 100592 1 C T - ReadM INDEL 0018.scaffold00058 100943 1 . C - ReadM SNP 0018.scaffold00058 100966 1 T A - ReadM SNP 0018.scaffold00058 101013 1 C A - ReadM SNP 0018.scaffold00058 101491 1 G A - Both INDEL 0018.scaffold00058 101622 1 . T scaffold1291 Both SNP 0018.scaffold00058 101866 1 C G scaffold1291 Both SNP 0018.scaffold00058 101889 1 G A scaffold1291 Both SNP 0018.scaffold00058 101971 1 C A scaffold1291 Both SNP 0018.scaffold00058 102007 1 A G scaffold1291 Both SNP 0018.scaffold00058 102084 1 T C scaffold1291 Both SNP 0018.scaffold00058 102162 1 C T scaffold1291 Both SNP 0018.scaffold00058 102585 1 C T scaffold1291 Both SNP 0018.scaffold00058 102607 1 C G scaffold1291 Both SNP 0018.scaffold00058 102686 1 G A scaffold1291 Both SNP 0018.scaffold00058 102799 1 C T scaffold1291 Both SNP 0018.scaffold00058 102979 1 A G scaffold1291 Both INDEL 0018.scaffold00058 103179 1 G . scaffold1291 Both SNP 0018.scaffold00058 103273 1 A G scaffold1291 Both SNP 0018.scaffold00058 103285 1 C G scaffold1291 Both SNP 0018.scaffold00058 103433 1 G A scaffold1291 Both SNP 0018.scaffold00058 103489 1 A C scaffold1291 ScafM INDEL 0018.scaffold00058 103897 31 ............................... CAACAAGAACAAGATGTCTATTTTTGTTACT scaffold1291 Both SNP 0018.scaffold00058 104331 1 T C scaffold1291 Both SNP 0018.scaffold00058 104346 1 G C scaffold1291 Both INDEL 0018.scaffold00058 104425 1 . A scaffold1291 Both SNP 0018.scaffold00058 104479 1 A G scaffold1291 ReadM SNP 0018.scaffold00058 104670 1 A T - Both SNP 0018.scaffold00058 105026 1 C T scaffold1291 ReadM SNP 0018.scaffold00058 105141 1 T A - ReadM SNP 0018.scaffold00058 105652 1 A G - ReadM SNP 0018.scaffold00058 105701 1 A C - Both SNP 0018.scaffold00058 106031 1 T C scaffold1291 Both SNP 0018.scaffold00058 106099 1 C T scaffold1291 Both SNP 0018.scaffold00058 106181 1 G A scaffold1291 Both SNP 0018.scaffold00058 106495 1 T C scaffold1291 ReadM SNP 0018.scaffold00058 108080 1 C G - ReadM SNP 0018.scaffold00058 108155 1 A G - ReadM SNP 0018.scaffold00058 108395 1 A G - ReadM SNP 0018.scaffold00058 108432 1 A G - ReadM SNP 0018.scaffold00058 108610 1 G A - ReadM SNP 0018.scaffold00058 108693 1 T A - ReadM SNP 0018.scaffold00058 108806 1 C T - ReadM SNP 0018.scaffold00058 109001 1 A T - ReadM SNP 0018.scaffold00058 109064 1 A G - ReadM SNP 0018.scaffold00058 109072 1 T C - ReadM SNP 0018.scaffold00058 109085 1 C T - ReadM SNP 0018.scaffold00058 109144 1 A T - ReadM SNP 0018.scaffold00058 109330 1 A T - ReadM SNP 0018.scaffold00058 109691 1 G C - ReadM SNP 0018.scaffold00058 109747 1 C A - Both SNP 0018.scaffold00058 110302 1 C T scaffold1291 Both SNP 0018.scaffold00058 110619 1 C T scaffold1291 Both SNP 0018.scaffold00058 111066 1 A C scaffold1291 Both SNP 0018.scaffold00058 111250 1 G A scaffold1291 Both SNP 0018.scaffold00058 111686 1 A T scaffold1291 Both SNP 0018.scaffold00058 111722 1 A T scaffold1291 ScafM INDEL 0018.scaffold00058 111760 2 TT .. scaffold1291 Both SNP 0018.scaffold00058 111802 1 C T scaffold1291 Both SNP 0018.scaffold00058 111994 1 T C scaffold1291 Both SNP 0018.scaffold00058 112114 1 A G scaffold1291 Both SNP 0018.scaffold00058 112152 1 A G scaffold1291 Both INDEL 0018.scaffold00058 112190 1 . C scaffold1291 Both SNP 0018.scaffold00058 112251 1 T G scaffold1291 Both SNP 0018.scaffold00058 112261 1 T A scaffold1291 Both SNP 0018.scaffold00058 112333 1 A G scaffold1291 Both SNP 0018.scaffold00058 112379 1 A T scaffold1291 Both SNP 0018.scaffold00058 112407 1 C T scaffold1291 Both SNP 0018.scaffold00058 112531 1 C G scaffold1291 Both SNP 0018.scaffold00058 112721 1 C T scaffold1291 Both SNP 0018.scaffold00058 112909 1 C T scaffold1291 Both SNP 0018.scaffold00058 113040 1 G A scaffold1291 Both SNP 0018.scaffold00058 113407 1 C T scaffold1291 ScafM INDEL 0018.scaffold00058 113456 1 . A scaffold1291 ScafM INDEL 0018.scaffold00058 113459 1 . A scaffold1291 Both SNP 0018.scaffold00058 113469 1 C A scaffold1291 Both SNP 0018.scaffold00058 113665 1 T C scaffold1291 ReadM SNP 0018.scaffold00058 113752 1 G A - ReadM SNP 0018.scaffold00058 113990 1 C G - ReadM SNP 0018.scaffold00058 114022 1 C T - ReadM SNP 0018.scaffold00058 114049 1 C A - ReadM SNP 0018.scaffold00058 114130 1 T C - ReadM SNP 0018.scaffold00058 114327 1 C T - ReadM SNP 0018.scaffold00058 114674 1 C A - ReadM INDEL 0018.scaffold00058 114792 1 A . - ReadM SNP 0018.scaffold00058 114850 1 C A - ReadM SNP 0018.scaffold00058 117345 1 T A - ReadM SNP 0018.scaffold00058 117385 1 A G - ReadM SNP 0018.scaffold00058 117417 1 A G - ReadM SNP 0018.scaffold00058 117746 1 G A - ReadM SNP 0018.scaffold00058 118118 1 A G - ReadM SNP 0018.scaffold00058 118236 1 C T - ReadM SNP 0018.scaffold00058 118485 1 T A - ReadM SNP 0018.scaffold00058 118634 1 G T - ReadM SNP 0018.scaffold00058 118741 1 C T - ReadM SNP 0018.scaffold00058 118766 1 G C - ReadM SNP 0018.scaffold00058 119211 1 A C - ReadM SNP 0018.scaffold00058 119251 1 A G - ReadM SNP 0018.scaffold00058 119478 1 C G - ReadM SNP 0018.scaffold00058 119588 1 G A - ReadM SNP 0018.scaffold00058 119756 1 A T - ReadM SNP 0018.scaffold00058 119900 1 G T - ReadM SNP 0018.scaffold00058 120244 1 C A - ReadM SNP 0018.scaffold00058 120820 1 T C - ReadM SNP 0018.scaffold00058 121329 1 T C - ReadM SNP 0018.scaffold00058 121709 1 G C - ReadM SNP 0018.scaffold00058 121788 1 C T - ReadM SNP 0018.scaffold00058 122142 1 G A - ReadM SNP 0018.scaffold00058 122468 1 C T - ReadM SNP 0018.scaffold00058 122991 1 G T - ReadM SNP 0018.scaffold00058 123251 1 C A - ReadM SNP 0018.scaffold00058 123326 1 A C - ReadM SNP 0018.scaffold00058 123505 1 A C - ReadM SNP 0018.scaffold00058 123529 1 T C - ReadM SNP 0018.scaffold00058 123860 1 C T - ReadM SNP 0018.scaffold00058 124100 1 T A - ReadM SNP 0018.scaffold00058 124222 1 T C - ReadM SNP 0018.scaffold00058 124356 1 G A - ReadM SNP 0018.scaffold00058 124740 1 C T - ReadM SNP 0018.scaffold00058 124785 1 A G - ReadM SNP 0018.scaffold00058 124815 1 A G - ReadM SNP 0018.scaffold00058 124923 1 G A - ReadM SNP 0018.scaffold00058 125033 1 T C - ScafM SNP 0018.scaffold00058 144314 1 T C scaffold24767 ReadM SNP 0018.scaffold00058 147031 1 A T - ReadM SNP 0018.scaffold00058 147060 1 C T - ReadM SNP 0018.scaffold00058 147081 1 A C - ReadM SNP 0018.scaffold00058 147510 1 C T - Both SNP 0018.scaffold00058 147648 1 T A scaffold3110 Both SNP 0018.scaffold00058 147733 1 C T scaffold3110 Both SNP 0018.scaffold00058 147742 1 G A scaffold3110 Both SNP 0018.scaffold00058 147885 1 T C scaffold3110 Both SNP 0018.scaffold00058 147920 1 C T scaffold3110 Both SNP 0018.scaffold00058 147949 1 C A scaffold3110 Both INDEL 0018.scaffold00058 147965 1 . C scaffold3110 Both SNP 0018.scaffold00058 148518 1 C T scaffold3110 Both SNP 0018.scaffold00058 148728 1 C T scaffold3110 Both SNP 0018.scaffold00058 149136 1 T A scaffold3110 ReadM SNP 0018.scaffold00058 149250 1 T C - ReadM SNP 0018.scaffold00058 149373 2 TT CA - ReadM INDEL 0018.scaffold00058 149594 1 . T - ReadM SNP 0018.scaffold00058 149662 1 G A - ReadM SNP 0018.scaffold00058 149721 1 G T - ReadM SNP 0018.scaffold00058 149847 1 A G - ReadM INDEL 0018.scaffold00058 149998 1 . A - Both SNP 0018.scaffold00058 150285 1 T C scaffold3110 Both SNP 0018.scaffold00058 150492 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 150730 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 150756 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 150797 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 150818 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 150855 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 150885 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 150895 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 150913 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 150916 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 150928 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 151885 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 151901 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 151912 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 151927 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 151953 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 151978 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 152065 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 152142 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 152145 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 152171 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 152177 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 152183 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 152195 2 AA GG scaffold3110 ScafM SNP 0018.scaffold00058 152207 1 C T scaffold3110 Both SNP 0018.scaffold00058 152302 1 G A scaffold3110 Both SNP 0018.scaffold00058 152344 1 C T scaffold3110 Both SNP 0018.scaffold00058 152446 1 A T scaffold3110 Both SNP 0018.scaffold00058 152608 1 G A scaffold3110 Both SNP 0018.scaffold00058 152625 1 A C scaffold3110 Both SNP 0018.scaffold00058 152638 1 A T scaffold3110 Both SNP 0018.scaffold00058 152661 1 T A scaffold3110 Both SNP 0018.scaffold00058 152696 1 C T scaffold3110 Both SNP 0018.scaffold00058 152835 1 A C scaffold3110 Both SNP 0018.scaffold00058 152885 1 C T scaffold3110 Both SNP 0018.scaffold00058 152912 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 152918 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 152920 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 152968 1 A G scaffold3110 Both SNP 0018.scaffold00058 152980 1 C A scaffold3110 Both SNP 0018.scaffold00058 153007 1 A G scaffold3110 Both SNP 0018.scaffold00058 153017 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153233 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 153251 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153259 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 153312 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 153316 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153325 2 CA GG scaffold3110 ScafM SNP 0018.scaffold00058 153332 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 153336 1 T C scaffold3110 Both SNP 0018.scaffold00058 153355 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153442 1 G A scaffold3110 Both SNP 0018.scaffold00058 153452 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153463 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153465 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 153487 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 153496 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 153511 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153521 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 153525 1 G C scaffold3110 Both SNP 0018.scaffold00058 153543 1 A T scaffold3110 Both SNP 0018.scaffold00058 153658 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153664 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 153668 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153682 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153707 2 CA TG scaffold3110 ScafM SNP 0018.scaffold00058 153732 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 153736 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 153763 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 153803 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 153823 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 153827 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 153830 1 G T scaffold3110 Both SNP 0018.scaffold00058 153884 1 C G scaffold3110 Both SNP 0018.scaffold00058 153998 1 T A scaffold3110 Both SNP 0018.scaffold00058 154015 1 A G scaffold3110 Both SNP 0018.scaffold00058 154094 1 A T scaffold3110 Both SNP 0018.scaffold00058 154112 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 154153 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 154212 1 A G scaffold3110 ScafM INDEL 0018.scaffold00058 154229 8 CATAGGGG ........ scaffold3110 ScafM SNP 0018.scaffold00058 154249 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 154270 1 A G scaffold3110 Both SNP 0018.scaffold00058 154367 1 G T scaffold3110 Both SNP 0018.scaffold00058 154402 1 A T scaffold3110 Both SNP 0018.scaffold00058 154437 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 154452 1 T C scaffold3110 Both SNP 0018.scaffold00058 154458 1 A G scaffold3110 Both SNP 0018.scaffold00058 154511 1 G A scaffold3110 Both SNP 0018.scaffold00058 154524 1 A G scaffold3110 Both SNP 0018.scaffold00058 154554 1 C T scaffold3110 Both SNP 0018.scaffold00058 154604 1 T G scaffold3110 Both SNP 0018.scaffold00058 154656 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 154694 1 G A scaffold3110 ScafM INDEL 0018.scaffold00058 154696 1 . A scaffold3110 ScafM INDEL 0018.scaffold00058 154697 2 .. TT scaffold3110 ScafM SNP 0018.scaffold00058 154700 1 G T scaffold3110 ScafM INDEL 0018.scaffold00058 154756 18 .................. AAGCAAGAATCATGAGAG scaffold3110 ScafM INDEL 0018.scaffold00058 154757 2 .. CA scaffold3110 ScafM SNP 0018.scaffold00058 154807 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 154809 1 A G scaffold3110 ScafM INDEL 0018.scaffold00058 154837 2 GC .. scaffold3110 ScafM INDEL 0018.scaffold00058 154841 1 C . scaffold3110 ScafM SNP 0018.scaffold00058 154873 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 154876 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 154911 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 154953 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 154957 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 154959 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 154979 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 154994 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 154996 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 154998 1 C T scaffold3110 Both SNP 0018.scaffold00058 155078 1 G A scaffold3110 Both SNP 0018.scaffold00058 155102 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 155114 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 155124 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 155152 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 155155 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 155173 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 155176 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 155181 2 TG CA scaffold3110 ReadM SNP 0018.scaffold00058 155270 1 G A - ReadM SNP 0018.scaffold00058 155295 1 C T - ReadM SNP 0018.scaffold00058 155368 1 T G - ReadM SNP 0018.scaffold00058 155394 1 G T - ReadM SNP 0018.scaffold00058 155881 1 T A - ReadM INDEL 0018.scaffold00058 155908 1 C . - ScafM INDEL 0018.scaffold00058 156426 8 ........ GCATGCAT scaffold3110 ScafM SNP 0018.scaffold00058 156438 1 A T scaffold3110 ScafM INDEL 0018.scaffold00058 156477 1 . T scaffold3110 ScafM SNP 0018.scaffold00058 156486 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 156506 1 T C scaffold3110 ScafM INDEL 0018.scaffold00058 156535 1 T . scaffold3110 ScafM SNP 0018.scaffold00058 156546 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 156557 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 156579 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 156595 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 156597 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 156676 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 156693 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 156733 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 156767 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 156773 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 156810 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 156814 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 156845 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 156851 1 G T scaffold3110 ReadM INDEL 0018.scaffold00058 156924 1 C . - ReadM SNP 0018.scaffold00058 156977 1 G A - ReadM SNP 0018.scaffold00058 156982 1 C T - ReadM SNP 0018.scaffold00058 157062 1 T C - ReadM SNP 0018.scaffold00058 157066 1 A G - ReadM SNP 0018.scaffold00058 157074 1 G A - ScafM SNP 0018.scaffold00058 157171 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 157192 1 G A scaffold3110 Both SNP 0018.scaffold00058 157222 1 A G scaffold3110 Both SNP 0018.scaffold00058 157233 1 G A scaffold3110 Both INDEL 0018.scaffold00058 157239 1 . T scaffold3110 Both SNP 0018.scaffold00058 157311 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 157340 2 CT GC scaffold3110 ScafM INDEL 0018.scaffold00058 157350 1 T . scaffold3110 ScafM INDEL 0018.scaffold00058 157366 10 .......... GTTTTCAAAA scaffold3110 ScafM INDEL 0018.scaffold00058 157368 1 . T scaffold3110 ScafM SNP 0018.scaffold00058 157370 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 157373 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 157377 3 CCC TGT scaffold3110 ScafM SNP 0018.scaffold00058 157383 1 G C scaffold3110 Both SNP 0018.scaffold00058 157427 1 C G scaffold3110 Both INDEL 0018.scaffold00058 157522 1 . A scaffold3110 Both SNP 0018.scaffold00058 157524 1 G A scaffold3110 ScafM INDEL 0018.scaffold00058 157686 8 ........ TAATCATA scaffold3110 ScafM SNP 0018.scaffold00058 158331 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 158363 1 A . scaffold3110 ScafM SNP 0018.scaffold00058 158369 1 A T scaffold3110 Both SNP 0018.scaffold00058 158376 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 158482 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 158490 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 158505 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 158548 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 158638 1 G T scaffold3110 ScafM INDEL 0018.scaffold00058 158680 19 ................... GAATTCATAACTTTCGGTT scaffold3110 ScafM INDEL 0018.scaffold00058 158710 1 . T scaffold3110 ScafM SNP 0018.scaffold00058 158725 2 TT AG scaffold3110 ScafM SNP 0018.scaffold00058 158754 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 158777 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 158807 1 T C scaffold3110 ScafM INDEL 0018.scaffold00058 158819 8 TGCGCGTT ........ scaffold3110 ScafM INDEL 0018.scaffold00058 158829 1 G . scaffold3110 ScafM INDEL 0018.scaffold00058 158832 2 TT .C scaffold3110 ScafM SNP 0018.scaffold00058 158849 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 158860 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 158863 1 C A scaffold3110 ReadM SNP 0018.scaffold00058 158988 1 G A - Both SNP 0018.scaffold00058 159028 1 T A scaffold3110 Both SNP 0018.scaffold00058 159098 1 T C scaffold3110 Both INDEL 0018.scaffold00058 159126 1 A . scaffold3110 Both SNP 0018.scaffold00058 159154 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 159235 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 159242 1 G A scaffold3110 Both SNP 0018.scaffold00058 159413 1 T A scaffold3110 Both SNP 0018.scaffold00058 159429 1 T G scaffold3110 Both SNP 0018.scaffold00058 159550 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 159568 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 159570 1 T G scaffold3110 Both SNP 0018.scaffold00058 159628 1 A C scaffold3110 Both SNP 0018.scaffold00058 159633 1 A G scaffold3110 Both SNP 0018.scaffold00058 159655 1 A T scaffold3110 ScafM INDEL 0018.scaffold00058 159722 5 ATTTT ..... scaffold3110 ScafM SNP 0018.scaffold00058 159735 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 159738 2 CA TT scaffold3110 ScafM SNP 0018.scaffold00058 159746 1 C G scaffold3110 ScafM INDEL 0018.scaffold00058 159793 47 ............................................... CTAACACATGAGCTTGATTAACTTGCTGACCAGAAACTTTAGAAATG scaffold3110 ScafM SNP 0018.scaffold00058 159868 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 159911 1 G A scaffold3110 ScafM INDEL 0018.scaffold00058 159918 2 AA .G scaffold3110 ScafM SNP 0018.scaffold00058 159949 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 159999 2 GG AA scaffold3110 ScafM SNP 0018.scaffold00058 160043 1 A T scaffold3110 ReadM SNP 0018.scaffold00058 160078 1 A C - ReadM SNP 0018.scaffold00058 160105 1 C T - ScafM SNP 0018.scaffold00058 160881 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 160900 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 160935 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 160956 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 160970 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 161006 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 161058 3 TAT ... scaffold3110 ScafM SNP 0018.scaffold00058 161072 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 161077 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 161092 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 161140 1 A C scaffold3110 ScafM INDEL 0018.scaffold00058 161159 1 A . scaffold3110 ScafM SNP 0018.scaffold00058 161171 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 161179 5 ..... AAATC scaffold3110 ScafM SNP 0018.scaffold00058 161245 1 C G scaffold3110 Both SNP 0018.scaffold00058 161261 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 161293 2 GC AT scaffold3110 Both SNP 0018.scaffold00058 161379 1 T C scaffold3110 Both SNP 0018.scaffold00058 161415 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 161426 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 161437 1 C T scaffold3110 Both SNP 0018.scaffold00058 161496 1 T C scaffold3110 Both SNP 0018.scaffold00058 161502 1 G A scaffold3110 ReadM SNP 0018.scaffold00058 161582 1 C G - ReadM SNP 0018.scaffold00058 161670 1 G A - ReadM SNP 0018.scaffold00058 161722 1 G A - ReadM SNP 0018.scaffold00058 161927 1 A G - ReadM SNP 0018.scaffold00058 161981 1 C G - ScafM INDEL 0018.scaffold00058 162001 3 ... CAG scaffold3110 ReadM SNP 0018.scaffold00058 162021 1 A G - ScafM SNP 0018.scaffold00058 162129 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 162143 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 162181 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 162206 2 TG CA scaffold3110 ScafM SNP 0018.scaffold00058 162211 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 162221 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 162226 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 162236 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 162324 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 162335 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 162344 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 162357 1 . T scaffold3110 ScafM SNP 0018.scaffold00058 162388 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 162398 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 162407 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 162411 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 162468 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 162499 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 162515 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 162520 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 162542 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 162547 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 162685 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 162710 2 TT AC scaffold3110 ScafM SNP 0018.scaffold00058 162723 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 162740 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 162745 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 162762 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 162771 1 T A scaffold3110 ScafM INDEL 0018.scaffold00058 162777 1 . A scaffold3110 ScafM SNP 0018.scaffold00058 162780 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 162809 1 C T scaffold3110 ReadM SNP 0018.scaffold00058 162982 1 C T - ReadM SNP 0018.scaffold00058 163021 1 G C - ScafM SNP 0018.scaffold00058 163115 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 163124 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 163141 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 163150 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 163160 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 163217 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 163220 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 163225 1 G C scaffold3110 ReadM SNP 0018.scaffold00058 163388 1 G A - ReadM SNP 0018.scaffold00058 163477 1 A G - ReadM SNP 0018.scaffold00058 163507 1 T C - ReadM SNP 0018.scaffold00058 163533 1 C T - ScafM SNP 0018.scaffold00058 163568 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 163571 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 163584 1 T C scaffold3110 Both SNP 0018.scaffold00058 163615 1 G A scaffold3110 Both SNP 0018.scaffold00058 163629 1 T G scaffold3110 Both SNP 0018.scaffold00058 163649 1 A T scaffold3110 ReadM SNP 0018.scaffold00058 163862 1 T C - ReadM SNP 0018.scaffold00058 163887 1 C T - Both SNP 0018.scaffold00058 163972 1 C A scaffold3110 Both SNP 0018.scaffold00058 164024 1 C A scaffold3110 Both SNP 0018.scaffold00058 164052 1 G A scaffold3110 Both SNP 0018.scaffold00058 164060 1 A C scaffold3110 ReadM INDEL 0018.scaffold00058 164157 3 TTA ... - ScafM INDEL 0018.scaffold00058 164255 3 ... GGA scaffold3110 ScafM SNP 0018.scaffold00058 164279 1 T C scaffold3110 Both INDEL 0018.scaffold00058 164335 2 AA .. scaffold3110 Both SNP 0018.scaffold00058 164359 1 T C scaffold3110 Both SNP 0018.scaffold00058 164415 1 G A scaffold3110 Both SNP 0018.scaffold00058 164426 1 C A scaffold3110 Both SNP 0018.scaffold00058 164444 1 G T scaffold3110 ScafM INDEL 0018.scaffold00058 164525 3 AAC ... scaffold3110 Both SNP 0018.scaffold00058 164549 1 A T scaffold3110 Both SNP 0018.scaffold00058 164650 1 G A scaffold3110 Both SNP 0018.scaffold00058 164722 1 G A scaffold3110 Both INDEL 0018.scaffold00058 164724 1 . G scaffold3110 Both SNP 0018.scaffold00058 164763 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 164789 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 164800 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 164806 1 G A scaffold3110 ScafM INDEL 0018.scaffold00058 164824 1 . C scaffold3110 Both SNP 0018.scaffold00058 164870 1 A T scaffold3110 Both SNP 0018.scaffold00058 164878 1 A T scaffold3110 Both SNP 0018.scaffold00058 164901 1 T C scaffold3110 Both SNP 0018.scaffold00058 164970 1 A C scaffold3110 Both SNP 0018.scaffold00058 164985 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 165443 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 165471 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 165476 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 165478 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 165507 1 A G scaffold3110 ReadM SNP 0018.scaffold00058 170873 1 C A - ReadM SNP 0018.scaffold00058 170895 1 G A - ReadM SNP 0018.scaffold00058 170919 1 T G - ReadM SNP 0018.scaffold00058 171004 1 C A - ScafM SNP 0018.scaffold00058 171111 2 GT AC scaffold3110 ScafM SNP 0018.scaffold00058 171143 2 CG TA scaffold3110 ScafM SNP 0018.scaffold00058 171161 1 C T scaffold3110 Both SNP 0018.scaffold00058 171181 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 171246 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 171256 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 171258 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 171274 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 171305 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 171309 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 171366 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 171368 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 171454 3 ATC GGT scaffold3110 Both SNP 0018.scaffold00058 171477 1 G T scaffold3110 Both SNP 0018.scaffold00058 171547 1 G A scaffold3110 Both SNP 0018.scaffold00058 171589 1 T G scaffold3110 ScafM INDEL 0018.scaffold00058 171599 4 TTTA .... scaffold3110 Both SNP 0018.scaffold00058 171630 1 G T scaffold3110 Both SNP 0018.scaffold00058 171692 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 171736 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 171754 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 171804 1 G C scaffold3110 Both INDEL 0018.scaffold00058 171822 1 T . scaffold3110 Both SNP 0018.scaffold00058 171850 1 T A scaffold3110 Both SNP 0018.scaffold00058 171889 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 171951 6 ...... ATCCTT scaffold3110 ScafM SNP 0018.scaffold00058 171957 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 171971 1 C T scaffold3110 Both SNP 0018.scaffold00058 172028 1 C T scaffold3110 Both SNP 0018.scaffold00058 172037 1 T G scaffold3110 Both SNP 0018.scaffold00058 172041 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 172102 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 172125 1 T C scaffold3110 ScafM INDEL 0018.scaffold00058 172129 3 ... AAT scaffold3110 ScafM SNP 0018.scaffold00058 172153 1 G T scaffold3110 Both SNP 0018.scaffold00058 172199 1 T C scaffold3110 Both SNP 0018.scaffold00058 172203 1 C T scaffold3110 Both SNP 0018.scaffold00058 172221 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 172275 1 A C scaffold3110 ScafM SNP 0018.scaffold00058 172279 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 172308 2 TG CA scaffold3110 ScafM SNP 0018.scaffold00058 172319 1 C T scaffold3110 Both SNP 0018.scaffold00058 172368 1 A C scaffold3110 Both SNP 0018.scaffold00058 172375 1 A G scaffold3110 Both SNP 0018.scaffold00058 172415 1 T C scaffold3110 Both SNP 0018.scaffold00058 172477 1 T C scaffold3110 Both SNP 0018.scaffold00058 172509 1 G A scaffold3110 Both SNP 0018.scaffold00058 172558 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 172589 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 172636 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 172645 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 172656 1 G T scaffold3110 ScafM INDEL 0018.scaffold00058 172666 3 ..A TTT scaffold3110 ScafM SNP 0018.scaffold00058 172690 1 A G scaffold3110 ScafM INDEL 0018.scaffold00058 172710 7 GTTTTTT ....... scaffold3110 ScafM SNP 0018.scaffold00058 172721 1 T A scaffold3110 Both SNP 0018.scaffold00058 172749 1 G C scaffold3110 Both INDEL 0018.scaffold00058 172844 1 . A scaffold3110 Both INDEL 0018.scaffold00058 172866 1 . T scaffold3110 Both SNP 0018.scaffold00058 172880 1 G T scaffold3110 Both SNP 0018.scaffold00058 172935 1 G T scaffold3110 Both SNP 0018.scaffold00058 172954 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 173126 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 173165 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 173202 1 A T scaffold3110 ScafM INDEL 0018.scaffold00058 173235 1 . A scaffold3110 ScafM SNP 0018.scaffold00058 173256 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 173265 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 173411 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 173421 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 173451 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 173456 1 G C scaffold3110 ScafM INDEL 0018.scaffold00058 173492 1 A . scaffold3110 ScafM SNP 0018.scaffold00058 173494 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 173552 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 173631 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 173641 2 GC AT scaffold3110 ScafM SNP 0018.scaffold00058 173665 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 174053 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174077 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 174088 1 A T scaffold3110 ScafM SNP 0018.scaffold00058 174122 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174146 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 174229 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 174240 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 174244 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174275 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 174293 1 C A scaffold3110 ScafM INDEL 0018.scaffold00058 174312 2 .. AA scaffold3110 ScafM SNP 0018.scaffold00058 174352 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174364 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 174415 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 174463 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174529 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 174549 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 174552 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 174556 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174583 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 174606 1 T A scaffold3110 ScafM INDEL 0018.scaffold00058 174672 1 T . scaffold3110 ScafM SNP 0018.scaffold00058 174674 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 175283 1 T C scaffold3110 ScafM SNP 0018.scaffold00058 175686 1 G T scaffold3110 ScafM INDEL 0018.scaffold00058 175695 10 .......... AGGATCGTAT scaffold3110 ScafM SNP 0018.scaffold00058 175723 1 A G scaffold3110 ScafM SNP 0018.scaffold00058 175767 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 175769 1 G A scaffold3110 ScafM SNP 0018.scaffold00058 175803 1 C T scaffold3110 ScafM INDEL 0018.scaffold00058 175807 2 AC .. scaffold3110 ScafM SNP 0018.scaffold00058 175832 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 175845 1 C G scaffold3110 ScafM SNP 0018.scaffold00058 175905 1 C T scaffold3110 ScafM SNP 0018.scaffold00058 175916 1 A G scaffold3110 ScafM INDEL 0018.scaffold00058 176834 1 . T scaffold3110 ScafM SNP 0018.scaffold00058 176862 1 C A scaffold3110 Both SNP 0018.scaffold00058 177299 1 T C scaffold3110 Both SNP 0018.scaffold00058 177311 1 A T scaffold3110 Both SNP 0018.scaffold00058 177365 1 A G scaffold3110 Both SNP 0018.scaffold00058 177399 1 T A scaffold3110 Both SNP 0018.scaffold00058 177464 1 G C scaffold3110 Both SNP 0018.scaffold00058 177480 1 C A scaffold3110 Both SNP 0018.scaffold00058 177593 1 A C scaffold3110 Both SNP 0018.scaffold00058 177604 1 G T scaffold3110 ScafM SNP 0018.scaffold00058 177723 1 C T scaffold3110 Both SNP 0018.scaffold00058 177867 1 G A scaffold3110 Both SNP 0018.scaffold00058 178073 1 T A scaffold3110 Both SNP 0018.scaffold00058 178096 1 G A scaffold3110 ScafM INDEL 0018.scaffold00058 178156 7 GGGGGGA ....... scaffold3110 ScafM SNP 0018.scaffold00058 178171 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 178173 1 G C scaffold3110 ScafM INDEL 0018.scaffold00058 178197 4 .... ATAT scaffold3110 Both SNP 0018.scaffold00058 178205 1 G A scaffold3110 Both SNP 0018.scaffold00058 178372 1 A C scaffold3110 Both SNP 0018.scaffold00058 178392 1 C T scaffold3110 Both SNP 0018.scaffold00058 178422 1 T G scaffold3110 ScafM SNP 0018.scaffold00058 178451 1 G C scaffold3110 ScafM SNP 0018.scaffold00058 178534 1 C A scaffold3110 ScafM SNP 0018.scaffold00058 178579 1 T A scaffold3110 ScafM SNP 0018.scaffold00058 182183 1 C A scaffold3819 ScafM SNP 0018.scaffold00058 182194 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182200 1 C T scaffold3819 ScafM INDEL 0018.scaffold00058 182208 1 . A scaffold3819 ScafM SNP 0018.scaffold00058 182231 2 TA CG scaffold3819 ScafM SNP 0018.scaffold00058 182240 1 T G scaffold3819 ScafM SNP 0018.scaffold00058 182245 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182258 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182264 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182267 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182297 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182301 4 ACCT TTAG scaffold3819 ScafM SNP 0018.scaffold00058 182306 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 182309 3 ATT CCC scaffold3819 ScafM SNP 0018.scaffold00058 182370 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182378 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 182390 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182394 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182417 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182422 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 182424 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182441 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182474 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182495 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 182499 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182501 1 C G scaffold3819 ScafM SNP 0018.scaffold00058 182503 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182507 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182509 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182516 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182525 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 182533 2 CG TA scaffold3819 ScafM SNP 0018.scaffold00058 182543 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 182552 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182554 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182556 1 C G scaffold3819 ScafM SNP 0018.scaffold00058 182561 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 182563 2 CC TG scaffold3819 ScafM SNP 0018.scaffold00058 182576 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182579 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182650 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182659 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182666 1 C A scaffold3819 ScafM SNP 0018.scaffold00058 182681 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 182684 2 TC GT scaffold3819 ScafM SNP 0018.scaffold00058 182696 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182720 1 C G scaffold3819 ScafM SNP 0018.scaffold00058 182722 2 TC GT scaffold3819 ScafM SNP 0018.scaffold00058 182737 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182744 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 182752 3 CAA TGG scaffold3819 ScafM SNP 0018.scaffold00058 182761 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182763 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182767 2 TG AT scaffold3819 ScafM SNP 0018.scaffold00058 182774 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182780 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182782 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182787 4 ATGT GCCC scaffold3819 ScafM SNP 0018.scaffold00058 182801 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182804 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182814 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182816 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182825 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 182832 2 CC TT scaffold3819 ScafM SNP 0018.scaffold00058 182836 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182840 1 T A scaffold3819 ScafM INDEL 0018.scaffold00058 182848 24 TAGTACTGTTGCCTCTGCCTCCAA ........................ scaffold3819 ScafM SNP 0018.scaffold00058 182876 1 T G scaffold3819 ScafM SNP 0018.scaffold00058 182894 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182911 2 TC CT scaffold3819 ScafM SNP 0018.scaffold00058 182914 2 TC CT scaffold3819 ScafM SNP 0018.scaffold00058 182924 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182927 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182936 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182942 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 182954 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 182957 1 C A scaffold3819 ScafM SNP 0018.scaffold00058 182960 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 182963 1 C A scaffold3819 ScafM SNP 0018.scaffold00058 182981 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 182984 1 A T scaffold3819 ScafM SNP 0018.scaffold00058 182987 1 A T scaffold3819 ScafM SNP 0018.scaffold00058 183011 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183013 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183022 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183024 1 C A scaffold3819 ScafM SNP 0018.scaffold00058 183029 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183033 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183046 2 GA TG scaffold3819 ScafM SNP 0018.scaffold00058 183056 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183063 1 C G scaffold3819 ScafM SNP 0018.scaffold00058 183065 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183076 2 GT TC scaffold3819 ScafM SNP 0018.scaffold00058 183094 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183103 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183110 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183121 2 GA AG scaffold3819 ScafM SNP 0018.scaffold00058 183137 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183163 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183182 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 183188 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183200 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183203 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183245 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183251 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183254 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183272 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183281 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183286 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183290 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 183307 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183311 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183338 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183347 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183353 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183356 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183358 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 183368 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183377 2 TG CA scaffold3819 ScafM SNP 0018.scaffold00058 183383 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 183386 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183403 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183413 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183422 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183434 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183439 2 CG TA scaffold3819 ScafM SNP 0018.scaffold00058 183446 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183452 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183461 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 183470 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183475 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183482 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183491 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183506 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183551 1 G C scaffold3819 ScafM SNP 0018.scaffold00058 183559 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183593 1 C G scaffold3819 ScafM SNP 0018.scaffold00058 183611 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 183614 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183620 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183626 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183637 1 T C scaffold3819 ScafM SNP 0018.scaffold00058 183654 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183662 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183665 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183677 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183681 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 183698 1 A C scaffold3819 ScafM SNP 0018.scaffold00058 183700 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183731 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183753 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183767 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183773 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183793 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183800 1 C T scaffold3819 ScafM SNP 0018.scaffold00058 183814 1 A G scaffold3819 ScafM SNP 0018.scaffold00058 183817 1 G T scaffold3819 ScafM SNP 0018.scaffold00058 183821 1 T C scaffold3819 ScafM INDEL 0018.scaffold00058 183824 1 A . scaffold3819 ScafM INDEL 0018.scaffold00058 183831 4 TGTG .... scaffold3819 ScafM SNP 0018.scaffold00058 183838 1 T C scaffold3819 ScafM INDEL 0018.scaffold00058 183842 2 AT .. scaffold3819 ScafM INDEL 0018.scaffold00058 183849 1 A . scaffold3819 ScafM SNP 0018.scaffold00058 183852 1 T A scaffold3819 ScafM SNP 0018.scaffold00058 183855 3 CAT TTA scaffold3819 ScafM SNP 0018.scaffold00058 183886 1 G A scaffold3819 ScafM SNP 0018.scaffold00058 183891 1 G C scaffold3819 ScafM INDEL 0018.scaffold00058 183893 2 AG .. scaffold3819 ScafM SNP 0018.scaffold00058 183901 1 A G scaffold3819 ScafM INDEL 0018.scaffold00058 183907 1 . A scaffold3819 ScafM INDEL 0018.scaffold00058 183921 1 . T scaffold3819 ScafM SNP 0018.scaffold00058 188869 1 A C scaffold8531 ScafM INDEL 0018.scaffold00058 188871 1 C . scaffold8531 ScafM INDEL 0018.scaffold00058 188873 1 C . scaffold8531 ScafM SNP 0018.scaffold00058 188875 1 C T scaffold8531 ScafM SNP 0018.scaffold00058 191436 1 C G scaffold8531 ScafM SNP 0018.scaffold00058 191833 1 A T scaffold8531 Both SNP 0018.scaffold00058 192007 1 T C scaffold8531 Both SNP 0018.scaffold00058 192121 1 T C scaffold8531 Both SNP 0018.scaffold00058 192201 1 A G scaffold8531 ScafM INDEL 0018.scaffold00058 192348 50 .................................................. TTTAGGTATCACACTCATCACATACTAATTAATTTACAAAAGAGATAATG scaffold8531 ReadM SNP 0018.scaffold00058 192424 1 T C - ReadM INDEL 0018.scaffold00058 192536 1 T . - ReadM SNP 0018.scaffold00058 192565 1 A G - ScafM SNP 0018.scaffold00058 192679 1 A G scaffold8531 Both SNP 0018.scaffold00058 192809 1 G T scaffold8531 Both SNP 0018.scaffold00058 192819 1 C T scaffold8531 ReadM SNP 0018.scaffold00058 192870 1 T C - ReadM SNP 0018.scaffold00058 192877 1 C A - ReadM SNP 0018.scaffold00058 192943 1 A T - ReadM SNP 0018.scaffold00058 193000 1 T C - ReadM SNP 0018.scaffold00058 193058 1 A T - ReadM SNP 0018.scaffold00058 193115 1 T C - ReadM SNP 0018.scaffold00058 193148 1 G A - ReadM SNP 0018.scaffold00058 193220 1 T C - ReadM SNP 0018.scaffold00058 193261 1 C T - ReadM SNP 0018.scaffold00058 193310 1 A C - ReadM SNP 0018.scaffold00058 193339 1 A C - ReadM SNP 0018.scaffold00058 193463 1 C T - ReadM SNP 0018.scaffold00058 193585 1 G T - ReadM SNP 0018.scaffold00058 193653 1 T A - ReadM SNP 0018.scaffold00058 193670 1 T C - ReadM SNP 0018.scaffold00058 193854 1 T C - ReadM SNP 0018.scaffold00058 193872 1 C T - ReadM SNP 0018.scaffold00058 193943 1 G T - ReadM SNP 0018.scaffold00058 193964 1 C T - ReadM SNP 0018.scaffold00058 194086 1 A G - ReadM SNP 0018.scaffold00058 194148 1 C G - ReadM SNP 0018.scaffold00058 194315 1 A G - ReadM SNP 0018.scaffold00058 194450 1 A T - ReadM SNP 0018.scaffold00058 194618 1 T G - ReadM SNP 0018.scaffold00058 194692 1 A G - ReadM SNP 0018.scaffold00058 194713 1 G A - ReadM SNP 0018.scaffold00058 194742 1 G T - ReadM SNP 0018.scaffold00058 194814 1 T G - ReadM SNP 0018.scaffold00058 194863 1 C T - ReadM SNP 0018.scaffold00058 195114 1 G C - ReadM SNP 0018.scaffold00058 195202 1 T C - ReadM SNP 0018.scaffold00058 195258 1 A T - ReadM SNP 0018.scaffold00058 195261 1 G A - ReadM SNP 0018.scaffold00058 195273 1 C A - ReadM SNP 0018.scaffold00058 195401 2 CA TG - ReadM SNP 0018.scaffold00058 195443 1 T G - ReadM SNP 0018.scaffold00058 195501 1 C T - ReadM INDEL 0018.scaffold00058 195516 1 T . - ReadM SNP 0018.scaffold00058 195594 1 C T - ReadM SNP 0018.scaffold00058 195610 1 G A - ReadM SNP 0018.scaffold00058 195744 1 G A - ReadM SNP 0018.scaffold00058 195753 1 A C - ReadM SNP 0018.scaffold00058 195773 1 G C - ReadM SNP 0018.scaffold00058 195830 1 G T - ReadM SNP 0018.scaffold00058 195898 1 T C - ReadM SNP 0018.scaffold00058 195901 1 A C - ReadM SNP 0018.scaffold00058 196081 1 A G - ReadM SNP 0018.scaffold00058 196149 1 T C - ReadM SNP 0018.scaffold00058 196200 1 C T - ReadM SNP 0018.scaffold00058 196237 1 C T - ReadM SNP 0018.scaffold00058 196242 1 C G - ReadM INDEL 0018.scaffold00058 196364 1 . T - ReadM SNP 0018.scaffold00058 196477 1 T C - ReadM SNP 0018.scaffold00058 196552 1 G A - ReadM SNP 0018.scaffold00058 196560 1 G A - ReadM SNP 0018.scaffold00058 196572 1 T C - ReadM SNP 0018.scaffold00058 196732 1 T A - ReadM SNP 0018.scaffold00058 196740 1 C T - ReadM SNP 0018.scaffold00058 196761 1 A G - ReadM SNP 0018.scaffold00058 196873 1 A T - ReadM SNP 0018.scaffold00058 196880 1 A T - ReadM SNP 0018.scaffold00058 196919 1 A G - ReadM SNP 0018.scaffold00058 197049 1 C T - ReadM SNP 0018.scaffold00058 197132 1 A T - ReadM SNP 0018.scaffold00058 197252 1 C G - ReadM SNP 0018.scaffold00058 197338 1 G T - ReadM INDEL 0018.scaffold00058 197347 2 TT .. - ReadM SNP 0018.scaffold00058 197667 1 T C - ReadM SNP 0018.scaffold00058 197693 1 A C - ReadM SNP 0018.scaffold00058 197778 1 C T - ReadM SNP 0018.scaffold00058 197831 1 G A - ReadM SNP 0018.scaffold00058 197849 1 G C - ReadM SNP 0018.scaffold00058 197918 1 T C - ReadM SNP 0018.scaffold00058 198036 1 A T - ReadM SNP 0018.scaffold00058 198074 1 T C - ReadM SNP 0018.scaffold00058 198200 1 G A - ReadM SNP 0018.scaffold00058 198267 1 T C - ReadM SNP 0018.scaffold00058 198295 1 A G - ReadM SNP 0018.scaffold00058 198393 1 G T - ReadM SNP 0018.scaffold00058 198447 1 T C - ReadM SNP 0018.scaffold00058 198491 1 G A - ReadM SNP 0018.scaffold00058 198548 1 G A - ReadM SNP 0018.scaffold00058 198590 1 A G - ReadM SNP 0018.scaffold00058 198694 1 C T - ReadM SNP 0018.scaffold00058 198701 1 G A - ReadM SNP 0018.scaffold00058 198754 1 C A - ReadM SNP 0018.scaffold00058 198836 1 T G - ReadM SNP 0018.scaffold00058 198850 1 G A - ReadM SNP 0018.scaffold00058 198903 1 T C - ScafM SNP 0019.scaffold00065 59478 1 G T scaffold19135 ScafM SNP 0019.scaffold00065 59482 2 GG TA scaffold19135 ReadM INDEL 0019.scaffold00065 60422 1 . A - ReadM INDEL 0019.scaffold00065 60423 1 . T - ScafM SNP 0019.scaffold00065 60444 1 T C scaffold19135 ScafM SNP 0019.scaffold00065 61062 1 C T scaffold19135 ScafM INDEL 0019.scaffold00065 81004 1 . A scaffold10409 ScafM SNP 0019.scaffold00065 82618 1 G A scaffold10384 Both SNP 0020.scaffold00069 2964 1 A G scaffold29117 ScafM SNP 0020.scaffold00069 7155 1 A C scaffold29117 ReadM SNP 0020.scaffold00069 11881 1 T G - ReadM SNP 0020.scaffold00069 12037 1 A G - ScafM SNP 0020.scaffold00069 12683 1 C T scaffold29117 ScafM SNP 0020.scaffold00069 13107 1 A C scaffold29117 ReadM SNP 0020.scaffold00069 13771 1 G C - ReadM SNP 0020.scaffold00069 13934 1 C A - ScafM SNP 0020.scaffold00069 14127 1 G A scaffold23541 ScafM SNP 0020.scaffold00069 14129 2 TT GA scaffold23541 ScafM SNP 0020.scaffold00069 14136 1 C T scaffold23541 ScafM SNP 0020.scaffold00069 14158 1 A T scaffold23541 ScafM SNP 0020.scaffold00069 14175 1 A G scaffold23541 ScafM INDEL 0020.scaffold00069 14217 1 . A scaffold23541 ScafM SNP 0020.scaffold00069 14276 1 G A scaffold23541 ScafM SNP 0020.scaffold00069 14281 1 A T scaffold23541 ScafM INDEL 0020.scaffold00069 14301 1 C . scaffold23541 ScafM INDEL 0020.scaffold00069 14303 4 ACTA .... scaffold23541 ReadM SNP 0020.scaffold00069 14304 1 C T - ScafM INDEL 0020.scaffold00069 14308 3 GGA ... scaffold23541 ScafM INDEL 0020.scaffold00069 14314 2 TA .. scaffold23541 ReadM SNP 0020.scaffold00069 14315 1 A G - ScafM SNP 0020.scaffold00069 14348 1 A C scaffold23541 ScafM INDEL 0020.scaffold00069 14359 3 TAA ... scaffold23541 ScafM SNP 0020.scaffold00069 14378 1 G T scaffold23541 ScafM INDEL 0020.scaffold00069 14386 3 TTA ... scaffold23541 ScafM INDEL 0020.scaffold00069 14392 1 G . scaffold23541 ScafM SNP 0020.scaffold00069 14408 1 T G scaffold23541 ScafM SNP 0020.scaffold00069 14410 1 G A scaffold23541 Both SNP 0020.scaffold00069 14419 1 T A scaffold23541 ScafM SNP 0020.scaffold00069 14423 1 A G scaffold23541 ScafM SNP 0020.scaffold00069 14427 1 G C scaffold23541 ScafM INDEL 0020.scaffold00069 14470 1 T . scaffold23541 ScafM SNP 0020.scaffold00069 14472 1 T A scaffold23541 ScafM INDEL 0020.scaffold00069 14487 1 G . scaffold23541 ScafM INDEL 0020.scaffold00069 14493 3 ..T CCG scaffold23541 ScafM INDEL 0020.scaffold00069 14495 2 .. CC scaffold23541 ScafM SNP 0020.scaffold00069 14508 1 C A scaffold23541 ScafM SNP 0020.scaffold00069 14512 1 G A scaffold23541 ScafM SNP 0020.scaffold00069 14523 1 G T scaffold23541 ScafM SNP 0020.scaffold00069 14533 1 T A scaffold23541 ScafM SNP 0020.scaffold00069 14541 1 C T scaffold23541 ScafM SNP 0020.scaffold00069 14546 1 C A scaffold23541 ScafM SNP 0020.scaffold00069 14558 1 G A scaffold23541 ScafM SNP 0020.scaffold00069 14560 1 T C scaffold23541 ScafM SNP 0020.scaffold00069 14567 1 T C scaffold23541 ScafM SNP 0020.scaffold00069 14573 1 G A scaffold23541 ReadM INDEL 0020.scaffold00069 14603 1 . T - ReadM SNP 0020.scaffold00069 15212 1 A C - ReadM SNP 0020.scaffold00069 15218 1 G A - ReadM SNP 0020.scaffold00069 15374 1 C T - ReadM SNP 0020.scaffold00069 15507 1 C A - ReadM SNP 0020.scaffold00069 15638 1 A G - ReadM SNP 0020.scaffold00069 15952 1 A G - ReadM SNP 0020.scaffold00069 16053 1 C G - ReadM INDEL 0020.scaffold00069 16236 1 . A - ReadM SNP 0020.scaffold00069 16446 1 T C - ReadM SNP 0020.scaffold00069 16630 1 A G - ReadM SNP 0020.scaffold00069 16667 1 A G - ReadM SNP 0020.scaffold00069 16713 1 A G - ScafM SNP 0020.scaffold00069 16854 1 C A scaffold17243 ScafM SNP 0020.scaffold00069 16858 1 A G scaffold17243 ScafM SNP 0020.scaffold00069 16884 1 A T scaffold17243 ScafM SNP 0020.scaffold00069 16893 1 T C scaffold17243 ScafM SNP 0020.scaffold00069 16947 1 G A scaffold17243 ScafM INDEL 0020.scaffold00069 16948 2 .. CA scaffold17243 ScafM INDEL 0020.scaffold00069 16949 2 .T GA scaffold17243 ScafM INDEL 0020.scaffold00069 16992 4 .... AATT scaffold17243 ScafM SNP 0020.scaffold00069 17068 2 CG AT scaffold17243 ScafM INDEL 0020.scaffold00069 17071 1 T . scaffold17243 ScafM SNP 0020.scaffold00069 17101 1 A G scaffold17243 ScafM INDEL 0020.scaffold00069 17110 1 . G scaffold17243 ScafM SNP 0020.scaffold00069 17129 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 17136 8 CAGTAAGT ........ scaffold17243 ScafM SNP 0020.scaffold00069 17166 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 17172 2 .. AT scaffold17243 ScafM SNP 0020.scaffold00069 17201 1 T A scaffold17243 ScafM SNP 0020.scaffold00069 17244 1 G A scaffold17243 ScafM INDEL 0020.scaffold00069 17248 1 . A scaffold17243 ScafM INDEL 0020.scaffold00069 17249 1 . C scaffold17243 ScafM SNP 0020.scaffold00069 17252 1 C A scaffold17243 ScafM SNP 0020.scaffold00069 17272 1 C G scaffold17243 ReadM SNP 0020.scaffold00069 17375 1 T C - ReadM SNP 0020.scaffold00069 17826 1 G C - ScafM SNP 0020.scaffold00069 19276 1 A G scaffold29117 ScafM INDEL 0020.scaffold00069 20002 10 CTCCCCCCCC .......... scaffold17243 ScafM INDEL 0020.scaffold00069 20016 1 A . scaffold17243 ScafM INDEL 0020.scaffold00069 20044 2 CC .. scaffold17243 ScafM INDEL 0020.scaffold00069 20047 2 CC .. scaffold17243 Both SNP 0020.scaffold00069 20158 1 A G scaffold17243 ScafM INDEL 0020.scaffold00069 20424 1 A . scaffold17243 ScafM INDEL 0020.scaffold00069 20509 2 CC .T scaffold17243 ScafM SNP 0020.scaffold00069 20538 1 A G scaffold17243 ScafM SNP 0020.scaffold00069 20678 1 G A scaffold17243 ReadM SNP 0020.scaffold00069 20789 1 A G - ReadM SNP 0020.scaffold00069 20841 1 T A - Both INDEL 0020.scaffold00069 20969 2 TC .. scaffold17243 ScafM SNP 0020.scaffold00069 21019 1 T G scaffold17243 ScafM SNP 0020.scaffold00069 21033 1 C T scaffold17243 ScafM SNP 0020.scaffold00069 21062 1 T A scaffold17243 ScafM SNP 0020.scaffold00069 21066 1 T C scaffold17243 ScafM INDEL 0020.scaffold00069 21234 6 ATCGTG ...... scaffold17243 ScafM SNP 0020.scaffold00069 21265 1 C T scaffold17243 ScafM SNP 0020.scaffold00069 21298 1 T C scaffold17243 ScafM SNP 0020.scaffold00069 21337 1 G C scaffold17243 Both SNP 0020.scaffold00069 21341 1 G A scaffold17243 ScafM INDEL 0020.scaffold00069 21580 3 ... TCT scaffold17243 Both SNP 0020.scaffold00069 21673 1 C T scaffold17243 Both SNP 0020.scaffold00069 21688 1 A G scaffold17243 ScafM SNP 0020.scaffold00069 21697 1 C T scaffold17243 Both SNP 0020.scaffold00069 21759 1 C G scaffold17243 Both SNP 0020.scaffold00069 21990 1 T C scaffold17243 Both SNP 0020.scaffold00069 22016 1 G A scaffold17243 Both SNP 0020.scaffold00069 22150 1 C T scaffold17243 ScafM SNP 0020.scaffold00069 22326 1 A T scaffold17243 Both SNP 0020.scaffold00069 22363 1 T C scaffold17243 ScafM INDEL 0020.scaffold00069 22462 7 ....... CCAATGG scaffold17243 ScafM SNP 0020.scaffold00069 23873 1 A T scaffold17243 ScafM SNP 0020.scaffold00069 23931 2 TT AA scaffold17243 ScafM SNP 0020.scaffold00069 23939 1 G C scaffold17243 ScafM SNP 0020.scaffold00069 23948 1 C A scaffold17243 ScafM INDEL 0020.scaffold00069 23956 2 AA .. scaffold17243 Both SNP 0020.scaffold00069 24032 1 T C scaffold17243 ScafM SNP 0020.scaffold00069 24035 1 A C scaffold17243 ScafM SNP 0020.scaffold00069 24116 1 A C scaffold17243 ReadM SNP 0020.scaffold00069 24131 1 G C - ReadM SNP 0020.scaffold00069 24133 1 T A - ScafM SNP 0020.scaffold00069 24137 1 G A scaffold17243 ScafM SNP 0020.scaffold00069 24141 1 T G scaffold17243 ScafM SNP 0020.scaffold00069 24152 1 T C scaffold17243 ScafM SNP 0020.scaffold00069 24215 1 T G scaffold17243 Both SNP 0020.scaffold00069 24338 1 G A scaffold17243 Both SNP 0020.scaffold00069 24349 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 24366 5 TCGAG ..... scaffold17243 ScafM INDEL 0020.scaffold00069 24374 4 ATTA .... scaffold17243 ScafM SNP 0020.scaffold00069 24389 1 G T scaffold17243 ScafM SNP 0020.scaffold00069 24407 1 G A scaffold17243 ScafM SNP 0020.scaffold00069 24410 1 G T scaffold17243 ScafM SNP 0020.scaffold00069 24484 1 C T scaffold17243 ScafM SNP 0020.scaffold00069 24505 1 T G scaffold17243 ScafM SNP 0020.scaffold00069 24508 1 G C scaffold17243 ScafM SNP 0020.scaffold00069 24522 2 TC CT scaffold17243 ScafM SNP 0020.scaffold00069 24535 1 G A scaffold17243 ScafM SNP 0020.scaffold00069 24561 1 T C scaffold17243 ScafM SNP 0020.scaffold00069 24568 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 24571 2 .. AG scaffold17243 ScafM INDEL 0020.scaffold00069 24572 2 .A TT scaffold17243 ScafM INDEL 0020.scaffold00069 24576 5 ..... TTTGG scaffold17243 ScafM INDEL 0020.scaffold00069 24599 3 ... ATG scaffold17243 ScafM INDEL 0020.scaffold00069 24615 1 . G scaffold17243 ScafM SNP 0020.scaffold00069 24675 1 G T scaffold17243 ScafM INDEL 0020.scaffold00069 24689 5 CTTGA ..... scaffold17243 ScafM SNP 0020.scaffold00069 24696 1 C A scaffold17243 ScafM SNP 0020.scaffold00069 24702 1 A G scaffold17243 ScafM SNP 0020.scaffold00069 24760 1 A T scaffold17243 ScafM SNP 0020.scaffold00069 24763 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 24772 8 TGCATGAT ........ scaffold17243 ScafM SNP 0020.scaffold00069 24819 2 CG TT scaffold17243 ScafM SNP 0020.scaffold00069 24831 1 C T scaffold17243 ScafM INDEL 0020.scaffold00069 24880 2 GG .A scaffold17243 ScafM SNP 0020.scaffold00069 24894 1 A G scaffold17243 ScafM SNP 0020.scaffold00069 24898 1 C T scaffold17243 ScafM SNP 0020.scaffold00069 30728 1 A G scaffold45211 ScafM INDEL 0020.scaffold00069 30736 1 . C scaffold45211 ScafM INDEL 0020.scaffold00069 30796 1 A . scaffold45211 ScafM INDEL 0020.scaffold00069 30806 1 T . scaffold45211 ScafM SNP 0020.scaffold00069 30823 1 A G scaffold45211 ScafM INDEL 0020.scaffold00069 30853 7 ....... ATTTTTG scaffold45211 ScafM SNP 0020.scaffold00069 30886 1 C T scaffold45211 ScafM INDEL 0020.scaffold00069 30900 5 TAATA ..... scaffold45211 ScafM INDEL 0020.scaffold00069 30932 1 A . scaffold45211 ScafM SNP 0020.scaffold00069 30986 1 C G scaffold45211 ScafM SNP 0020.scaffold00069 31001 1 G T scaffold45211 ScafM SNP 0020.scaffold00069 31007 1 A T scaffold45211 ScafM SNP 0020.scaffold00069 31012 2 CC TT scaffold45211 ScafM INDEL 0020.scaffold00069 31023 1 A . scaffold45211 ScafM SNP 0020.scaffold00069 31029 1 G A scaffold45211 ScafM SNP 0020.scaffold00069 31613 1 A G scaffold45211 ScafM SNP 0020.scaffold00069 31632 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 31662 1 T C scaffold45211 ScafM SNP 0020.scaffold00069 31665 1 G A scaffold45211 ScafM SNP 0020.scaffold00069 31674 1 G T scaffold45211 ScafM SNP 0020.scaffold00069 31683 1 A G scaffold45211 ScafM SNP 0020.scaffold00069 31696 1 T C scaffold45211 ScafM INDEL 0020.scaffold00069 31732 4 GTAT .... scaffold45211 ScafM INDEL 0020.scaffold00069 31738 4 AACC .TTT scaffold45211 ScafM SNP 0020.scaffold00069 31749 1 G T scaffold45211 ScafM SNP 0020.scaffold00069 31772 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 31784 1 T C scaffold45211 Both SNP 0020.scaffold00069 31814 1 T C scaffold45211 ScafM SNP 0020.scaffold00069 31922 1 T C scaffold45211 Both SNP 0020.scaffold00069 32018 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32046 1 C G scaffold45211 ScafM SNP 0020.scaffold00069 32055 1 C A scaffold45211 ScafM SNP 0020.scaffold00069 32083 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32176 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32242 1 T C scaffold45211 ScafM SNP 0020.scaffold00069 32252 1 T C scaffold45211 ScafM SNP 0020.scaffold00069 32255 1 G T scaffold45211 Both SNP 0020.scaffold00069 32360 1 G A scaffold45211 ScafM INDEL 0020.scaffold00069 32372 3 ... TAA scaffold45211 Both SNP 0020.scaffold00069 32396 1 A C scaffold45211 ScafM SNP 0020.scaffold00069 32418 1 T C scaffold45211 ScafM INDEL 0020.scaffold00069 32440 6 CAACAA ...... scaffold45211 ScafM SNP 0020.scaffold00069 32448 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32455 1 G T scaffold45211 Both SNP 0020.scaffold00069 32479 1 A G scaffold45211 ScafM SNP 0020.scaffold00069 32495 1 G A scaffold45211 Both SNP 0020.scaffold00069 32599 1 T A scaffold45211 ScafM SNP 0020.scaffold00069 32674 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32686 1 A G scaffold45211 Both SNP 0020.scaffold00069 32698 1 T C scaffold45211 ScafM SNP 0020.scaffold00069 32703 1 A T scaffold45211 ScafM SNP 0020.scaffold00069 32706 1 T A scaffold45211 ScafM SNP 0020.scaffold00069 32710 1 C T scaffold45211 ScafM SNP 0020.scaffold00069 32740 1 G A scaffold45211 ScafM SNP 0020.scaffold00069 32752 1 A G scaffold45211 ScafM SNP 0020.scaffold00069 32756 1 T A scaffold45211 ScafM SNP 0020.scaffold00069 32793 1 A T scaffold45211 ScafM SNP 0020.scaffold00069 32796 1 G A scaffold45211 ScafM SNP 0020.scaffold00069 32802 1 T G scaffold45211 ScafM SNP 0020.scaffold00069 32818 1 T C scaffold45211 ScafM INDEL 0020.scaffold00069 32860 1 . T scaffold45211 ScafM SNP 0020.scaffold00069 32888 1 T A scaffold45211 ScafM INDEL 0020.scaffold00069 34120 1 T . scaffold59721 ScafM INDEL 0020.scaffold00069 34135 2 TC .. scaffold59721 ScafM SNP 0020.scaffold00069 34148 1 A G scaffold59721 ScafM SNP 0020.scaffold00069 34227 1 C T scaffold59721 ScafM SNP 0020.scaffold00069 34232 1 G T scaffold59721 ScafM SNP 0020.scaffold00069 34245 1 A C scaffold59721 ScafM SNP 0020.scaffold00069 34281 1 G T scaffold59721 ScafM INDEL 0020.scaffold00069 34307 1 A . scaffold59721 ScafM INDEL 0020.scaffold00069 34312 1 A . scaffold59721 ScafM INDEL 0020.scaffold00069 34314 2 AT .C scaffold59721 ScafM SNP 0020.scaffold00069 34335 1 T C scaffold59721 ScafM SNP 0020.scaffold00069 34342 1 T C scaffold59721 ScafM SNP 0020.scaffold00069 34348 1 T C scaffold59721 ScafM SNP 0020.scaffold00069 34350 1 G T scaffold59721 ScafM SNP 0020.scaffold00069 34388 1 G A scaffold59721 ScafM SNP 0020.scaffold00069 34403 1 A G scaffold59721 ScafM SNP 0020.scaffold00069 34416 1 T C scaffold59721 ScafM INDEL 0020.scaffold00069 34434 3 GTA ... scaffold59721 ScafM SNP 0020.scaffold00069 34475 1 A T scaffold59721 ScafM SNP 0020.scaffold00069 34491 1 G A scaffold59721 ScafM INDEL 0020.scaffold00069 34556 1 T . scaffold59721 ScafM SNP 0020.scaffold00069 34573 1 G T scaffold59721 ScafM SNP 0020.scaffold00069 34575 1 T G scaffold59721 ScafM INDEL 0020.scaffold00069 34578 2 .. AA scaffold59721 ScafM SNP 0020.scaffold00069 34605 1 C T scaffold59721 ScafM SNP 0020.scaffold00069 34619 1 G T scaffold59721 ScafM INDEL 0020.scaffold00069 34640 1 A . scaffold59721 ScafM SNP 0020.scaffold00069 34671 1 A G scaffold59721 ScafM SNP 0020.scaffold00069 34693 1 T C scaffold59721 ReadM SNP 0020.scaffold00069 34772 1 T C - ReadM SNP 0020.scaffold00069 34815 1 A G - ReadM SNP 0020.scaffold00069 34857 1 G A - ReadM SNP 0020.scaffold00069 34960 1 G T - ReadM SNP 0020.scaffold00069 35001 1 C A - ReadM SNP 0020.scaffold00069 35238 1 T C - ReadM SNP 0020.scaffold00069 35415 1 C T - ScafM SNP 0020.scaffold00069 35587 1 A G C19777269 ScafM SNP 0020.scaffold00069 35598 1 A G C19777269 ScafM SNP 0020.scaffold00069 35620 1 G A C19777269 ScafM INDEL 0020.scaffold00069 35660 1 . T C19777269 ScafM SNP 0020.scaffold00069 35662 1 C G C19777269 ScafM SNP 0020.scaffold00069 35676 1 C T C19777269 ReadM SNP 0020.scaffold00069 35840 1 A G - ScafM INDEL 0020.scaffold00069 36062 7 ATTAGAA ....... C19777269 Both SNP 0020.scaffold00069 36195 1 T G C19777269 Both SNP 0020.scaffold00069 36337 1 C A C19777269 Both SNP 0020.scaffold00069 36562 1 C T C19777269 Both INDEL 0020.scaffold00069 36607 2 .. TG C19777269 Both INDEL 0020.scaffold00069 36631 1 . T C19777269 Both SNP 0020.scaffold00069 36993 1 C A C19777269 Both SNP 0020.scaffold00069 37049 1 T C C19777269 Both SNP 0020.scaffold00069 37265 1 A G C19777269 Both SNP 0020.scaffold00069 37438 1 T A C19777269 Both SNP 0020.scaffold00069 38245 1 C T C19777269 ReadM SNP 0020.scaffold00069 38590 1 A T - ReadM INDEL 0020.scaffold00069 38871 1 . T - ReadM INDEL 0020.scaffold00069 39438 2 AT .. - ReadM SNP 0020.scaffold00069 39459 1 A T - ReadM SNP 0020.scaffold00069 39515 1 C T - ReadM SNP 0020.scaffold00069 39850 1 T C - ReadM SNP 0020.scaffold00069 39861 1 T G - ReadM INDEL 0020.scaffold00069 39949 1 G . - ReadM SNP 0020.scaffold00069 40369 1 T G - Both SNP 0020.scaffold00069 40847 1 A T scaffold10083 Both SNP 0020.scaffold00069 40959 1 T C scaffold10083 Both SNP 0020.scaffold00069 41143 1 G C scaffold10083 Both SNP 0020.scaffold00069 41183 1 A G scaffold10083 Both SNP 0020.scaffold00069 41224 1 T C scaffold10083 Both SNP 0020.scaffold00069 41276 1 T G scaffold10083 Both SNP 0020.scaffold00069 41294 1 C T scaffold10083 ReadM SNP 0020.scaffold00069 41448 1 T C - Both SNP 0020.scaffold00069 41663 1 A G scaffold10083 Both INDEL 0020.scaffold00069 41680 1 T . scaffold10083 Both SNP 0020.scaffold00069 41761 1 G T scaffold10083 Both SNP 0020.scaffold00069 41863 1 G A scaffold10083 Both SNP 0020.scaffold00069 42326 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 42437 1 A C scaffold10083 Both SNP 0020.scaffold00069 42602 1 T G scaffold10083 Both SNP 0020.scaffold00069 42869 1 T C scaffold10083 ReadM SNP 0020.scaffold00069 43412 1 T A - ScafM INDEL 0020.scaffold00069 43823 1 . T scaffold10083 Both SNP 0020.scaffold00069 43864 1 G T scaffold10083 Both INDEL 0020.scaffold00069 43889 2 .. TT scaffold10083 Both SNP 0020.scaffold00069 44030 1 G A scaffold10083 Both INDEL 0020.scaffold00069 44319 1 . A scaffold10083 ScafM SNP 0020.scaffold00069 44323 1 G T scaffold10083 Both SNP 0020.scaffold00069 44447 1 A G scaffold10083 Both SNP 0020.scaffold00069 44630 1 A G scaffold10083 Both INDEL 0020.scaffold00069 44836 2 .. TA scaffold10083 ScafM INDEL 0020.scaffold00069 44954 8 ........ GTGTGTGT scaffold10083 Both SNP 0020.scaffold00069 45075 1 T C scaffold10083 Both SNP 0020.scaffold00069 45097 1 T G scaffold10083 Both SNP 0020.scaffold00069 45434 1 C T scaffold10083 ScafM INDEL 0020.scaffold00069 45620 7 ....... TGTTTTG scaffold10083 Both SNP 0020.scaffold00069 46114 1 T A scaffold10083 Both SNP 0020.scaffold00069 46414 1 G C scaffold10083 Both SNP 0020.scaffold00069 46590 1 C G scaffold10083 Both INDEL 0020.scaffold00069 46766 1 . G scaffold10083 ScafM SNP 0020.scaffold00069 46768 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 46773 1 G T scaffold10083 Both SNP 0020.scaffold00069 46899 1 A T scaffold10083 Both SNP 0020.scaffold00069 47239 1 C A scaffold10083 Both SNP 0020.scaffold00069 47438 1 G A scaffold10083 Both SNP 0020.scaffold00069 47652 1 C T scaffold10083 Both SNP 0020.scaffold00069 47789 1 A G scaffold10083 ReadM SNP 0020.scaffold00069 48155 1 C T - ReadM SNP 0020.scaffold00069 48224 1 C A - ReadM SNP 0020.scaffold00069 48243 1 T C - ReadM INDEL 0020.scaffold00069 48252 1 . A - Both SNP 0020.scaffold00069 48530 1 A G scaffold10083 Both SNP 0020.scaffold00069 48842 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 48965 2 GT AA scaffold10083 ReadM SNP 0020.scaffold00069 48998 1 T C - ReadM SNP 0020.scaffold00069 49026 1 G A - ScafM SNP 0020.scaffold00069 49415 1 C A scaffold10083 Both SNP 0020.scaffold00069 49693 1 A T scaffold10083 ScafM INDEL 0020.scaffold00069 49715 44 ............................................ TGTGAATTTGTGATGCATTGCATATTTGTGTGCTGAATATGAAT scaffold10083 Both SNP 0020.scaffold00069 49795 1 C T scaffold10083 Both SNP 0020.scaffold00069 49979 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 50043 1 T C scaffold10083 Both INDEL 0020.scaffold00069 50096 1 . T scaffold10083 Both SNP 0020.scaffold00069 50253 1 T C scaffold10083 Both SNP 0020.scaffold00069 50453 1 A C scaffold10083 Both SNP 0020.scaffold00069 50462 1 T C scaffold10083 Both SNP 0020.scaffold00069 50478 1 G A scaffold10083 Both INDEL 0020.scaffold00069 50513 1 A . scaffold10083 Both SNP 0020.scaffold00069 50650 1 A G scaffold10083 Both INDEL 0020.scaffold00069 50709 2 AC .. scaffold10083 Both INDEL 0020.scaffold00069 50965 1 A . scaffold10083 Both SNP 0020.scaffold00069 50999 1 A G scaffold10083 ReadM SNP 0020.scaffold00069 51165 1 T G - Both SNP 0020.scaffold00069 51296 1 G T scaffold10083 Both SNP 0020.scaffold00069 51890 1 T C scaffold10083 Both SNP 0020.scaffold00069 52047 1 T C scaffold10083 Both SNP 0020.scaffold00069 52066 1 T G scaffold10083 Both SNP 0020.scaffold00069 52218 1 A C scaffold10083 Both SNP 0020.scaffold00069 52342 1 A G scaffold10083 Both SNP 0020.scaffold00069 52393 1 A G scaffold10083 Both SNP 0020.scaffold00069 52479 1 C A scaffold10083 Both INDEL 0020.scaffold00069 52542 1 . A scaffold10083 Both SNP 0020.scaffold00069 52592 1 A T scaffold10083 Both SNP 0020.scaffold00069 52671 1 G A scaffold10083 Both SNP 0020.scaffold00069 53157 1 G A scaffold10083 Both SNP 0020.scaffold00069 53260 1 A G scaffold10083 Both SNP 0020.scaffold00069 53345 1 A G scaffold10083 Both SNP 0020.scaffold00069 53410 1 C A scaffold10083 Both SNP 0020.scaffold00069 53683 1 A G scaffold10083 Both SNP 0020.scaffold00069 53964 1 T A scaffold10083 Both SNP 0020.scaffold00069 54038 1 T A scaffold10083 Both SNP 0020.scaffold00069 54509 1 A C scaffold10083 Both SNP 0020.scaffold00069 54565 1 G C scaffold10083 ReadM SNP 0020.scaffold00069 54720 1 A T - ReadM SNP 0020.scaffold00069 54768 1 T C - ReadM SNP 0020.scaffold00069 54784 1 A G - ReadM SNP 0020.scaffold00069 55542 1 A G - ReadM SNP 0020.scaffold00069 55638 1 A G - Both SNP 0020.scaffold00069 56118 1 C T scaffold10083 Both SNP 0020.scaffold00069 56630 1 C A scaffold10083 Both SNP 0020.scaffold00069 56844 1 A T scaffold10083 Both SNP 0020.scaffold00069 56957 1 G A scaffold10083 Both SNP 0020.scaffold00069 57293 1 A C scaffold10083 Both SNP 0020.scaffold00069 57295 1 G A scaffold10083 Both SNP 0020.scaffold00069 57425 1 C T scaffold10083 Both SNP 0020.scaffold00069 57430 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 58022 1 T G scaffold10083 ScafM INDEL 0020.scaffold00069 58064 1 G . scaffold10083 ScafM INDEL 0020.scaffold00069 58067 1 G . scaffold10083 ScafM INDEL 0020.scaffold00069 58072 1 C . scaffold10083 ScafM SNP 0020.scaffold00069 58636 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 58712 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 58736 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 59026 1 G A scaffold10083 ScafM INDEL 0020.scaffold00069 59101 4 TGAT .... scaffold10083 Both SNP 0020.scaffold00069 59159 1 T C scaffold10083 Both SNP 0020.scaffold00069 59281 1 C T scaffold10083 Both SNP 0020.scaffold00069 59308 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 59674 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 59708 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 59722 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 59725 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 59728 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 59757 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 59791 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 59797 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 59799 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 60087 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 60091 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 60124 2 CA TG scaffold10083 ScafM SNP 0020.scaffold00069 60131 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60140 2 GC TT scaffold10083 ScafM SNP 0020.scaffold00069 60147 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 60157 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 60160 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 60174 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60178 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 60200 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60209 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60225 1 T G scaffold10083 ScafM INDEL 0020.scaffold00069 60240 2 TT .. scaffold10083 ScafM SNP 0020.scaffold00069 60243 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60250 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60253 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 60261 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 60277 1 T C scaffold10083 ScafM INDEL 0020.scaffold00069 60297 3 CCT ... scaffold10083 ScafM SNP 0020.scaffold00069 60302 3 CTA TGG scaffold10083 ScafM SNP 0020.scaffold00069 60307 2 TA GG scaffold10083 ScafM SNP 0020.scaffold00069 60311 1 A T scaffold10083 ScafM INDEL 0020.scaffold00069 60316 9 GTGAAAAAT ......... scaffold10083 ScafM INDEL 0020.scaffold00069 60326 2 AA .. scaffold10083 ScafM SNP 0020.scaffold00069 60331 3 CCA GGC scaffold10083 ScafM INDEL 0020.scaffold00069 60336 3 TTT ..G scaffold10083 ScafM SNP 0020.scaffold00069 60342 1 T G scaffold10083 ScafM INDEL 0020.scaffold00069 60344 5 TTTTT ..... scaffold10083 ScafM SNP 0020.scaffold00069 60350 1 A G scaffold10083 ScafM INDEL 0020.scaffold00069 60353 5 ATTTA ..... scaffold10083 ScafM SNP 0020.scaffold00069 60359 1 T G scaffold10083 ScafM INDEL 0020.scaffold00069 60361 1 A . scaffold10083 ScafM INDEL 0020.scaffold00069 60363 4 TTGA .... scaffold10083 ScafM INDEL 0020.scaffold00069 60371 6 AAAAAA ...... scaffold10083 ScafM INDEL 0020.scaffold00069 60378 4 AAAA .... scaffold10083 ScafM SNP 0020.scaffold00069 60421 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 60430 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 60434 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60443 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 60468 1 A C scaffold10083 ScafM INDEL 0020.scaffold00069 60479 4 ACAC .... scaffold10083 ScafM SNP 0020.scaffold00069 60498 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60597 1 G C scaffold10083 ScafM INDEL 0020.scaffold00069 60650 2 TT .. scaffold10083 ScafM SNP 0020.scaffold00069 60656 2 TC CT scaffold10083 ScafM SNP 0020.scaffold00069 60661 1 T G scaffold10083 ScafM SNP 0020.scaffold00069 60671 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60677 1 C G scaffold10083 ScafM INDEL 0020.scaffold00069 60697 11 ........... TCTAAAGAAGT scaffold10083 ScafM INDEL 0020.scaffold00069 60698 2 .. AT scaffold10083 ScafM SNP 0020.scaffold00069 60705 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 60722 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 60726 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60732 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60741 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 60749 1 G A scaffold10083 ScafM INDEL 0020.scaffold00069 60755 1 . G scaffold10083 ScafM SNP 0020.scaffold00069 60776 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 60788 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60792 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 60794 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 60807 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 60810 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 60813 1 C A scaffold10083 ScafM INDEL 0020.scaffold00069 60819 1 . T scaffold10083 ScafM SNP 0020.scaffold00069 60837 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60848 1 A C scaffold10083 ScafM SNP 0020.scaffold00069 60855 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60860 1 C T scaffold10083 ScafM INDEL 0020.scaffold00069 60876 1 . T scaffold10083 ScafM SNP 0020.scaffold00069 60888 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 60890 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 60899 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60905 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 60907 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 60918 1 C T scaffold10083 ReadM SNP 0020.scaffold00069 63881 1 G A - ReadM SNP 0020.scaffold00069 63892 1 G T - ReadM INDEL 0020.scaffold00069 64019 1 . T - ReadM SNP 0020.scaffold00069 64036 1 T G - ReadM SNP 0020.scaffold00069 64051 1 T C - ScafM SNP 0020.scaffold00069 64186 1 G A scaffold3129 ScafM SNP 0020.scaffold00069 64202 1 A G scaffold3129 ScafM SNP 0020.scaffold00069 64226 1 A G scaffold3129 ScafM SNP 0020.scaffold00069 64267 1 C T scaffold3129 ScafM SNP 0020.scaffold00069 64270 1 A G scaffold3129 ScafM SNP 0020.scaffold00069 64276 1 C T scaffold3129 ScafM SNP 0020.scaffold00069 64286 1 C T scaffold3129 ScafM SNP 0020.scaffold00069 64311 2 GG AA scaffold3129 ReadM SNP 0020.scaffold00069 66316 1 C T - ReadM SNP 0020.scaffold00069 66319 1 C T - ReadM SNP 0020.scaffold00069 66529 1 T G - ReadM SNP 0020.scaffold00069 66577 1 C T - ReadM SNP 0020.scaffold00069 66631 1 T A - ReadM SNP 0020.scaffold00069 66995 1 A G - ReadM SNP 0020.scaffold00069 67498 1 A G - ReadM SNP 0020.scaffold00069 67918 1 C T - ReadM SNP 0020.scaffold00069 68002 1 G A - ReadM SNP 0020.scaffold00069 69040 1 T G - ReadM SNP 0020.scaffold00069 69084 1 T G - ReadM SNP 0020.scaffold00069 69102 1 T A - ReadM SNP 0020.scaffold00069 69106 1 T A - ScafM SNP 0020.scaffold00069 69941 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 69951 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 69984 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 69989 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 70003 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 70015 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 70151 1 T C scaffold10083 Both SNP 0020.scaffold00069 70256 1 A C scaffold10083 Both SNP 0020.scaffold00069 70265 1 T G scaffold10083 Both INDEL 0020.scaffold00069 70298 1 . T scaffold10083 Both SNP 0020.scaffold00069 70443 1 A G scaffold10083 Both SNP 0020.scaffold00069 70494 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 70513 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 70517 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 70551 1 T G scaffold10083 ScafM INDEL 0020.scaffold00069 70556 3 GTT ... scaffold10083 ScafM INDEL 0020.scaffold00069 70561 1 G . scaffold10083 ScafM SNP 0020.scaffold00069 70566 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70572 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70585 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 70594 1 C T scaffold10083 ScafM INDEL 0020.scaffold00069 70615 2 TT .. scaffold10083 ScafM SNP 0020.scaffold00069 70618 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70638 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70651 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 70671 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70673 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 70682 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 70688 1 C G scaffold10083 ScafM INDEL 0020.scaffold00069 70694 2 .. GA scaffold10083 ScafM SNP 0020.scaffold00069 70702 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70749 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 70785 1 A C scaffold10083 ScafM SNP 0020.scaffold00069 70795 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 70808 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 70817 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70825 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 70847 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 70891 2 TG CA scaffold10083 Both SNP 0020.scaffold00069 70927 1 A C scaffold10083 Both SNP 0020.scaffold00069 70997 1 G T scaffold10083 Both SNP 0020.scaffold00069 71012 1 A G scaffold10083 Both SNP 0020.scaffold00069 71043 1 T G scaffold10083 Both SNP 0020.scaffold00069 71118 1 C G scaffold10083 Both SNP 0020.scaffold00069 71368 1 T G scaffold10083 Both SNP 0020.scaffold00069 71373 1 C T scaffold10083 Both SNP 0020.scaffold00069 71388 1 A G scaffold10083 Both SNP 0020.scaffold00069 71428 1 G T scaffold10083 Both INDEL 0020.scaffold00069 71451 1 . T scaffold10083 Both SNP 0020.scaffold00069 71570 1 T C scaffold10083 Both SNP 0020.scaffold00069 71586 1 A T scaffold10083 Both SNP 0020.scaffold00069 71604 1 C T scaffold10083 Both INDEL 0020.scaffold00069 71642 1 C . scaffold10083 Both SNP 0020.scaffold00069 71849 1 T C scaffold10083 Both INDEL 0020.scaffold00069 72111 1 . T scaffold10083 ScafM SNP 0020.scaffold00069 72118 1 A T scaffold10083 Both SNP 0020.scaffold00069 72332 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 72451 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 72460 2 TG GT scaffold10083 Both SNP 0020.scaffold00069 72475 1 T C scaffold10083 Both SNP 0020.scaffold00069 72626 1 T C scaffold10083 Both SNP 0020.scaffold00069 72826 1 C A scaffold10083 Both SNP 0020.scaffold00069 72835 1 T C scaffold10083 Both SNP 0020.scaffold00069 72880 1 G T scaffold10083 Both SNP 0020.scaffold00069 72899 1 T C scaffold10083 Both SNP 0020.scaffold00069 73065 1 T C scaffold10083 Both SNP 0020.scaffold00069 73078 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 73129 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 73144 1 A G scaffold10083 ScafM INDEL 0020.scaffold00069 73151 1 A . scaffold10083 ScafM INDEL 0020.scaffold00069 73155 1 T . scaffold10083 ScafM SNP 0020.scaffold00069 73157 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 73225 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 73227 7 TTATTAT CCCCCCC scaffold10083 ScafM SNP 0020.scaffold00069 73241 1 G C scaffold10083 ScafM INDEL 0020.scaffold00069 73242 2 .. CT scaffold10083 ScafM SNP 0020.scaffold00069 73246 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 73265 2 AT GC scaffold10083 ScafM INDEL 0020.scaffold00069 73301 2 GT .. scaffold10083 Both INDEL 0020.scaffold00069 73340 1 . T scaffold10083 Both SNP 0020.scaffold00069 73386 1 T C scaffold10083 Both SNP 0020.scaffold00069 73428 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 73450 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 73457 1 C G scaffold10083 ScafM SNP 0020.scaffold00069 73477 1 A T scaffold10083 Both SNP 0020.scaffold00069 73527 1 C T scaffold10083 Both SNP 0020.scaffold00069 73544 1 A G scaffold10083 Both SNP 0020.scaffold00069 73638 1 T C scaffold10083 Both SNP 0020.scaffold00069 73753 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 74136 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 74190 1 A G scaffold10083 Both SNP 0020.scaffold00069 74507 1 G T scaffold10083 Both SNP 0020.scaffold00069 74616 1 C T scaffold10083 Both SNP 0020.scaffold00069 74655 1 T C scaffold10083 Both SNP 0020.scaffold00069 74781 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 75027 1 A G scaffold10083 Both SNP 0020.scaffold00069 75539 1 C T scaffold10083 Both SNP 0020.scaffold00069 75546 1 A G scaffold10083 Both SNP 0020.scaffold00069 75572 1 T C scaffold10083 ScafM INDEL 0020.scaffold00069 75765 4 ATGT .... scaffold10083 ScafM SNP 0020.scaffold00069 75790 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 75801 1 T G scaffold10083 ScafM SNP 0020.scaffold00069 75837 1 A G scaffold10083 ScafM INDEL 0020.scaffold00069 75877 1 . A scaffold10083 ScafM SNP 0020.scaffold00069 75887 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 75913 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 76025 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 76046 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 77824 1 A C scaffold10083 ScafM INDEL 0020.scaffold00069 77885 4 TAAG .... scaffold10083 ScafM SNP 0020.scaffold00069 77897 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 78751 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 78758 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 78760 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 78771 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 78802 1 T A scaffold10083 ScafM INDEL 0020.scaffold00069 78814 3 ... GAA scaffold10083 ScafM INDEL 0020.scaffold00069 78820 1 . G scaffold10083 ScafM INDEL 0020.scaffold00069 78824 3 ... AAA scaffold10083 ScafM INDEL 0020.scaffold00069 78825 6 ...... AAAAAC scaffold10083 ScafM SNP 0020.scaffold00069 78830 1 A T scaffold10083 ScafM INDEL 0020.scaffold00069 78835 2 .. TG scaffold10083 ScafM SNP 0020.scaffold00069 78837 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 78840 2 CA TT scaffold10083 ScafM SNP 0020.scaffold00069 78892 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 78903 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 78905 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 78915 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 78918 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 78922 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 78964 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 78976 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 79051 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 79085 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 79095 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 79101 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 79138 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 79146 1 A C scaffold10083 ScafM SNP 0020.scaffold00069 79267 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 79271 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 79347 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 79357 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 79359 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 79369 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 79373 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 79381 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 79405 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 79513 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 79525 1 T C scaffold10083 ScafM INDEL 0020.scaffold00069 80215 9 ......... AGTACTTCA scaffold10083 ScafM SNP 0020.scaffold00069 80236 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 81255 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 81298 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 81301 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 81328 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 81335 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 81339 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 81355 1 G A scaffold10083 ScafM INDEL 0020.scaffold00069 81358 4 .... ATAT scaffold10083 ScafM SNP 0020.scaffold00069 81405 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 81418 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 81430 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 81559 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 81648 1 G A scaffold10083 ScafM INDEL 0020.scaffold00069 81660 3 TAG ... scaffold10083 ScafM SNP 0020.scaffold00069 81812 1 T C scaffold10083 ScafM INDEL 0020.scaffold00069 81840 1 T . scaffold10083 ScafM SNP 0020.scaffold00069 81980 1 C T scaffold10083 ReadM SNP 0020.scaffold00069 82031 1 T C - ReadM SNP 0020.scaffold00069 82042 1 C T - Both INDEL 0020.scaffold00069 82055 1 . T scaffold10083 ScafM SNP 0020.scaffold00069 82218 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 82227 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 82233 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 82280 1 A G scaffold10083 ScafM INDEL 0020.scaffold00069 82284 3 TAG ... scaffold10083 ScafM SNP 0020.scaffold00069 82291 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 82320 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 82359 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 82368 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 82370 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 82374 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 82404 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 82428 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 82453 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 82549 1 C A scaffold10083 ScafM SNP 0020.scaffold00069 82871 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 83498 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 83501 1 A T scaffold10083 ScafM SNP 0020.scaffold00069 83503 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 83530 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 83575 1 T A scaffold10083 ScafM INDEL 0020.scaffold00069 83597 2 TA .G scaffold10083 ScafM SNP 0020.scaffold00069 83617 1 G T scaffold10083 ScafM SNP 0020.scaffold00069 83634 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 83870 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 83893 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 85178 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 85204 2 GG AA scaffold10083 ScafM SNP 0020.scaffold00069 85221 1 C T scaffold10083 Both SNP 0020.scaffold00069 85253 1 A G scaffold10083 Both SNP 0020.scaffold00069 85341 1 C T scaffold10083 Both SNP 0020.scaffold00069 85411 1 C G scaffold10083 Both SNP 0020.scaffold00069 85414 1 T A scaffold10083 Both SNP 0020.scaffold00069 85443 1 T G scaffold10083 Both SNP 0020.scaffold00069 85505 1 A T scaffold10083 Both SNP 0020.scaffold00069 85513 1 C T scaffold10083 Both SNP 0020.scaffold00069 85742 1 G C scaffold10083 ScafM SNP 0020.scaffold00069 85772 2 CG TA scaffold10083 Both SNP 0020.scaffold00069 85780 1 A G scaffold10083 ReadM SNP 0020.scaffold00069 85959 1 C T - ReadM SNP 0020.scaffold00069 86043 1 T G - ReadM SNP 0020.scaffold00069 86081 1 A C - ReadM SNP 0020.scaffold00069 86137 1 A G - Both SNP 0020.scaffold00069 86212 1 G T scaffold10083 Both SNP 0020.scaffold00069 86324 1 A T scaffold10083 Both SNP 0020.scaffold00069 86442 1 C G scaffold10083 ReadM SNP 0020.scaffold00069 86523 1 A T - ReadM SNP 0020.scaffold00069 86627 1 A G - ReadM SNP 0020.scaffold00069 86645 1 T C - ReadM INDEL 0020.scaffold00069 86704 1 . T - ScafM INDEL 0020.scaffold00069 86765 3 ... ATT scaffold10083 ScafM SNP 0020.scaffold00069 86787 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 86938 1 T G scaffold10083 ScafM SNP 0020.scaffold00069 87253 1 G A scaffold10083 Both SNP 0020.scaffold00069 87290 1 C A scaffold10083 ReadM SNP 0020.scaffold00069 87874 1 A T - ReadM SNP 0020.scaffold00069 87878 1 G C - ReadM SNP 0020.scaffold00069 87928 1 C T - ReadM SNP 0020.scaffold00069 87947 1 A G - ReadM SNP 0020.scaffold00069 87986 1 C T - ReadM SNP 0020.scaffold00069 88008 1 A G - ReadM SNP 0020.scaffold00069 88071 1 A T - ReadM SNP 0020.scaffold00069 88101 1 C T - ReadM SNP 0020.scaffold00069 88275 1 G A - ReadM SNP 0020.scaffold00069 88279 1 T C - ReadM SNP 0020.scaffold00069 88317 1 G A - ReadM SNP 0020.scaffold00069 88375 1 C G - ReadM SNP 0020.scaffold00069 88395 1 A T - ReadM SNP 0020.scaffold00069 88416 1 A G - ReadM SNP 0020.scaffold00069 88441 1 G C - ReadM SNP 0020.scaffold00069 88544 1 T G - ReadM SNP 0020.scaffold00069 88578 1 A G - ReadM SNP 0020.scaffold00069 88649 1 A G - ReadM SNP 0020.scaffold00069 88729 1 C T - ReadM SNP 0020.scaffold00069 89579 1 T G - ScafM SNP 0020.scaffold00069 89689 1 C T scaffold10083 ReadM SNP 0020.scaffold00069 89948 1 G A - ReadM SNP 0020.scaffold00069 90021 1 G A - ReadM SNP 0020.scaffold00069 90033 1 G A - Both SNP 0020.scaffold00069 90088 1 C T scaffold10083 ReadM SNP 0020.scaffold00069 90196 1 T A - ReadM SNP 0020.scaffold00069 90203 1 C T - Both SNP 0020.scaffold00069 90345 1 C T scaffold10083 Both INDEL 0020.scaffold00069 90357 2 .. GG scaffold10083 Both SNP 0020.scaffold00069 90423 1 T C scaffold10083 Both SNP 0020.scaffold00069 90461 1 T C scaffold10083 ReadM SNP 0020.scaffold00069 90630 1 A G - ReadM SNP 0020.scaffold00069 90724 1 C T - ReadM SNP 0020.scaffold00069 90741 1 A T - ReadM SNP 0020.scaffold00069 90766 1 G T - ReadM SNP 0020.scaffold00069 90884 1 T C - ScafM SNP 0020.scaffold00069 91058 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 91070 1 T A scaffold10083 ScafM SNP 0020.scaffold00069 91101 1 G A scaffold10083 ScafM SNP 0020.scaffold00069 91108 1 T C scaffold10083 ScafM SNP 0020.scaffold00069 91133 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 91155 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 91159 1 T A scaffold10083 Both SNP 0020.scaffold00069 91183 1 C T scaffold10083 Both SNP 0020.scaffold00069 91330 1 A G scaffold10083 Both SNP 0020.scaffold00069 91511 1 A G scaffold10083 ScafM SNP 0020.scaffold00069 91519 1 T G scaffold10083 ScafM SNP 0020.scaffold00069 91521 1 C T scaffold10083 ScafM SNP 0020.scaffold00069 91528 1 G A scaffold10083 ReadM SNP 0020.scaffold00069 91655 1 G T - ReadM SNP 0020.scaffold00069 91690 1 C A - ReadM SNP 0020.scaffold00069 91731 1 C A - ScafM INDEL 0020.scaffold00069 91941 4 TGTT .... scaffold8175 ScafM INDEL 0020.scaffold00069 91948 1 C . scaffold8175 Both SNP 0020.scaffold00069 92010 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 92027 1 T A scaffold8175 ScafM SNP 0020.scaffold00069 92030 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92042 1 T G scaffold8175 ScafM SNP 0020.scaffold00069 92047 1 T A scaffold8175 ScafM INDEL 0020.scaffold00069 92057 1 A . scaffold8175 ScafM SNP 0020.scaffold00069 92064 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92069 1 C T scaffold8175 ScafM SNP 0020.scaffold00069 92085 2 CT AC scaffold8175 ScafM SNP 0020.scaffold00069 92110 1 C A scaffold8175 ScafM INDEL 0020.scaffold00069 92118 1 . C scaffold8175 ScafM SNP 0020.scaffold00069 92142 1 T C scaffold8175 ScafM SNP 0020.scaffold00069 92151 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92153 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 92208 1 A G scaffold8175 ScafM INDEL 0020.scaffold00069 92211 4 .... ATTC scaffold8175 ScafM SNP 0020.scaffold00069 92227 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92229 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92235 1 C A scaffold8175 ScafM SNP 0020.scaffold00069 92247 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 92261 1 T C scaffold8175 ScafM SNP 0020.scaffold00069 92264 1 G T scaffold8175 ScafM SNP 0020.scaffold00069 92288 1 C T scaffold8175 ScafM INDEL 0020.scaffold00069 92291 2 AA .T scaffold8175 ScafM INDEL 0020.scaffold00069 92314 2 TA .. scaffold8175 Both SNP 0020.scaffold00069 92337 1 T C scaffold8175 ScafM SNP 0020.scaffold00069 92365 1 A T scaffold8175 Both SNP 0020.scaffold00069 92376 1 T G scaffold8175 ScafM SNP 0020.scaffold00069 92388 1 T G scaffold8175 ScafM SNP 0020.scaffold00069 92411 1 T C scaffold8175 ScafM SNP 0020.scaffold00069 92427 1 T C scaffold8175 ScafM SNP 0020.scaffold00069 92444 1 T G scaffold8175 ScafM SNP 0020.scaffold00069 92446 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92448 1 G T scaffold8175 ScafM INDEL 0020.scaffold00069 92475 4 TACA .... scaffold8175 ScafM SNP 0020.scaffold00069 92501 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 92514 1 C T scaffold8175 ScafM SNP 0020.scaffold00069 92517 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 92541 1 C T scaffold8175 ScafM SNP 0020.scaffold00069 92565 1 T G scaffold8175 ScafM SNP 0020.scaffold00069 92584 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92610 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92612 1 G T scaffold8175 ScafM SNP 0020.scaffold00069 92627 2 AT GC scaffold8175 ScafM SNP 0020.scaffold00069 92632 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92638 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92695 1 G A scaffold8175 ScafM SNP 0020.scaffold00069 92722 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 92775 1 A C scaffold8175 ScafM SNP 0020.scaffold00069 92834 1 C T scaffold8175 ScafM INDEL 0020.scaffold00069 92892 1 . A scaffold8175 ScafM SNP 0020.scaffold00069 92898 1 C T scaffold8175 ScafM SNP 0020.scaffold00069 92963 1 A T scaffold8175 ScafM SNP 0020.scaffold00069 93022 1 C T scaffold8175 ScafM INDEL 0020.scaffold00069 93058 3 ..C AAA scaffold8175 ScafM SNP 0020.scaffold00069 93065 1 C T scaffold8175 ScafM SNP 0020.scaffold00069 93073 1 A G scaffold8175 ScafM SNP 0020.scaffold00069 93091 2 GC CA scaffold8175 ScafM SNP 0020.scaffold00069 93097 1 A C scaffold8175 ScafM SNP 0020.scaffold00069 93208 1 G T scaffold38759 ScafM SNP 0020.scaffold00069 93236 1 A G scaffold38759 Both SNP 0020.scaffold00069 93262 1 T C scaffold38759 ScafM SNP 0020.scaffold00069 93277 1 C T scaffold38759 Both SNP 0020.scaffold00069 93285 1 A G scaffold38759 ScafM SNP 0020.scaffold00069 93319 1 G A scaffold38759 ScafM INDEL 0020.scaffold00069 93420 3 TAT ... scaffold38759 ScafM SNP 0020.scaffold00069 93455 1 A G scaffold38759 Both SNP 0020.scaffold00069 93557 1 C A scaffold38759 Both SNP 0020.scaffold00069 93589 1 A G scaffold38759 Both SNP 0020.scaffold00069 93642 1 A C scaffold38759 ScafM SNP 0020.scaffold00069 93720 1 G T scaffold38759 Both SNP 0020.scaffold00069 93794 1 C T scaffold38759 ScafM INDEL 0020.scaffold00069 93885 1 G . scaffold38759 ScafM SNP 0020.scaffold00069 93900 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 93939 1 G T scaffold38759 ScafM SNP 0020.scaffold00069 93948 1 T C scaffold38759 ScafM SNP 0020.scaffold00069 93992 2 TC AG scaffold38759 ScafM SNP 0020.scaffold00069 94219 1 C A scaffold38759 ScafM SNP 0020.scaffold00069 94231 1 A G scaffold38759 Both SNP 0020.scaffold00069 94267 1 G A scaffold38759 Both SNP 0020.scaffold00069 94285 1 T C scaffold38759 Both INDEL 0020.scaffold00069 94398 1 A . scaffold38759 Both SNP 0020.scaffold00069 94415 1 C T scaffold38759 ScafM SNP 0020.scaffold00069 94465 1 A T scaffold38759 Both SNP 0020.scaffold00069 94491 1 A G scaffold38759 Both SNP 0020.scaffold00069 94503 1 A G scaffold38759 ReadM SNP 0020.scaffold00069 94545 1 C T - ReadM SNP 0020.scaffold00069 94640 1 A G - ReadM SNP 0020.scaffold00069 94682 1 T C - ReadM SNP 0020.scaffold00069 94740 1 C T - ReadM SNP 0020.scaffold00069 94760 1 T C - ScafM SNP 0020.scaffold00069 94810 1 A G scaffold38759 ScafM SNP 0020.scaffold00069 94817 1 C A scaffold38759 Both SNP 0020.scaffold00069 94875 1 A G scaffold38759 Both SNP 0020.scaffold00069 94910 1 G T scaffold38759 ReadM INDEL 0020.scaffold00069 94915 1 . G - ReadM INDEL 0020.scaffold00069 95020 1 T . - ReadM SNP 0020.scaffold00069 95090 1 G A - ReadM SNP 0020.scaffold00069 95145 1 G T - ScafM SNP 0020.scaffold00069 95320 1 C T scaffold50132 Both SNP 0020.scaffold00069 95365 1 A C scaffold50132 Both SNP 0020.scaffold00069 95380 1 T C scaffold50132 ScafM SNP 0020.scaffold00069 95389 1 C T scaffold50132 ScafM SNP 0020.scaffold00069 95488 1 C A scaffold50132 ScafM SNP 0020.scaffold00069 95490 1 T C scaffold50132 ScafM SNP 0020.scaffold00069 95551 1 A C scaffold50132 ScafM SNP 0020.scaffold00069 95596 1 G A scaffold50132 ScafM SNP 0020.scaffold00069 95647 1 A G scaffold50132 ScafM SNP 0020.scaffold00069 95650 1 G A scaffold50132 Both SNP 0020.scaffold00069 95683 1 T G scaffold50132 ScafM SNP 0020.scaffold00069 95797 1 G A scaffold50132 ScafM SNP 0020.scaffold00069 95851 1 C T scaffold50132 ScafM SNP 0020.scaffold00069 95854 1 A G scaffold50132 ScafM SNP 0020.scaffold00069 95899 1 C T scaffold50132 ScafM SNP 0020.scaffold00069 95907 1 G T scaffold50132 ScafM INDEL 0020.scaffold00069 95910 1 T . scaffold50132 ScafM INDEL 0020.scaffold00069 95912 8 TTCATTCT ........ scaffold50132 Both SNP 0020.scaffold00069 95941 1 A T scaffold50132 Both SNP 0020.scaffold00069 96106 1 G T scaffold50132 Both SNP 0020.scaffold00069 96151 1 A T scaffold50132 Both SNP 0020.scaffold00069 96165 1 C A scaffold50132 Both SNP 0020.scaffold00069 96190 1 G C scaffold50132 ReadM SNP 0020.scaffold00069 96380 1 C T - ReadM SNP 0020.scaffold00069 96422 1 T C - ReadM SNP 0020.scaffold00069 96491 1 G A - ReadM SNP 0020.scaffold00069 96580 1 T G - ReadM SNP 0020.scaffold00069 96650 1 A G - ReadM SNP 0020.scaffold00069 96653 1 C T - Both SNP 0020.scaffold00069 96826 1 G C scaffold50132 Both INDEL 0020.scaffold00069 96983 1 . T scaffold50132 ScafM SNP 0020.scaffold00069 96986 1 A G scaffold50132 Both SNP 0020.scaffold00069 97019 1 C T scaffold50132 ScafM SNP 0020.scaffold00069 97041 1 T C scaffold50132 ScafM SNP 0020.scaffold00069 97046 2 TT CA scaffold50132 ScafM SNP 0020.scaffold00069 97068 1 T G scaffold50132 ScafM SNP 0020.scaffold00069 97072 1 C T scaffold50132 ScafM SNP 0020.scaffold00069 97106 1 T C scaffold50132 ScafM SNP 0020.scaffold00069 97137 1 A T scaffold50132 ScafM INDEL 0020.scaffold00069 97147 3 ... AGG scaffold50132 Both SNP 0020.scaffold00069 97233 1 T C scaffold50132 Both SNP 0020.scaffold00069 97240 1 A G scaffold50132 Both SNP 0020.scaffold00069 97310 1 G C scaffold50132 Both SNP 0020.scaffold00069 97367 1 G C scaffold50132 ReadM INDEL 0020.scaffold00069 97788 1 C . - ReadM SNP 0020.scaffold00069 97902 1 C T - ReadM SNP 0020.scaffold00069 97924 1 G T - ScafM SNP 0020.scaffold00069 98523 1 A G scaffold50132 ScafM SNP 0020.scaffold00069 98604 1 A G scaffold50132 ScafM SNP 0020.scaffold00069 98612 1 A G scaffold50132 ScafM INDEL 0020.scaffold00069 98646 2 .. TT scaffold50132 ScafM SNP 0020.scaffold00069 98783 1 G A scaffold50132 ScafM INDEL 0020.scaffold00069 98949 1 A . scaffold38759 ScafM SNP 0020.scaffold00069 98955 1 T A scaffold38759 ScafM SNP 0020.scaffold00069 98957 1 C T scaffold38759 ScafM SNP 0020.scaffold00069 98960 2 AA GT scaffold38759 ScafM INDEL 0020.scaffold00069 98969 1 . T scaffold38759 ScafM INDEL 0020.scaffold00069 98972 2 AA .G scaffold38759 ScafM INDEL 0020.scaffold00069 98977 3 CCG ... scaffold38759 ScafM SNP 0020.scaffold00069 98982 1 G C scaffold38759 ScafM SNP 0020.scaffold00069 98984 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 99026 1 T C scaffold38759 ScafM INDEL 0020.scaffold00069 99031 2 AT .. scaffold38759 ScafM INDEL 0020.scaffold00069 99039 1 A . scaffold38759 ScafM SNP 0020.scaffold00069 99041 2 GT AC scaffold38759 ScafM SNP 0020.scaffold00069 99064 1 C T scaffold38759 ScafM INDEL 0020.scaffold00069 99068 1 C . scaffold38759 ScafM INDEL 0020.scaffold00069 99070 3 CGG ... scaffold38759 ScafM INDEL 0020.scaffold00069 99075 1 C . scaffold38759 ScafM SNP 0020.scaffold00069 99083 1 A G scaffold38759 ScafM SNP 0020.scaffold00069 99088 1 C T scaffold38759 ScafM SNP 0020.scaffold00069 99093 1 A T scaffold38759 ScafM INDEL 0020.scaffold00069 99095 2 CT .A scaffold38759 ScafM INDEL 0020.scaffold00069 99099 3 CCC ..T scaffold38759 ScafM SNP 0020.scaffold00069 99108 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 99110 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 99113 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 99138 1 A G scaffold38759 ScafM SNP 0020.scaffold00069 99151 1 A C scaffold38759 ScafM INDEL 0020.scaffold00069 99155 4 TGAT ...C scaffold38759 ScafM SNP 0020.scaffold00069 99168 1 A G scaffold38759 ScafM SNP 0020.scaffold00069 99174 1 C T scaffold38759 ScafM INDEL 0020.scaffold00069 99175 1 . A scaffold38759 ScafM SNP 0020.scaffold00069 99182 1 T A scaffold38759 ScafM SNP 0020.scaffold00069 99199 1 G A scaffold38759 ScafM SNP 0020.scaffold00069 99210 1 C T scaffold38759 ScafM INDEL 0020.scaffold00069 99283 7 ....... GCCCATG scaffold58479 ScafM SNP 0020.scaffold00069 99314 1 C T scaffold58479 ScafM INDEL 0020.scaffold00069 99349 7 ATTCCTC ....... scaffold58479 ScafM SNP 0020.scaffold00069 99360 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 99408 1 G A scaffold58479 ScafM SNP 0020.scaffold00069 99448 1 G T scaffold58479 ScafM SNP 0020.scaffold00069 99459 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 99470 1 C G scaffold58479 ScafM SNP 0020.scaffold00069 99551 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 99999 1 A G scaffold58479 ScafM INDEL 0020.scaffold00069 100010 2 .. AA scaffold58479 ScafM SNP 0020.scaffold00069 100029 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 100045 1 G A scaffold58479 ScafM SNP 0020.scaffold00069 100080 1 A G scaffold58479 ScafM INDEL 0020.scaffold00069 100105 1 . A scaffold58479 ScafM SNP 0020.scaffold00069 100180 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 100198 1 C A scaffold58479 ScafM SNP 0020.scaffold00069 100240 1 T A scaffold58479 ScafM SNP 0020.scaffold00069 100353 1 T A scaffold58479 ScafM INDEL 0020.scaffold00069 100379 2 AA .T scaffold58479 ScafM SNP 0020.scaffold00069 100417 1 T A scaffold58479 ScafM SNP 0020.scaffold00069 100421 1 A C scaffold58479 ScafM SNP 0020.scaffold00069 103567 1 A C scaffold58479 ScafM SNP 0020.scaffold00069 103570 1 G T scaffold58479 ScafM SNP 0020.scaffold00069 103630 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 103727 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 103853 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 103872 2 CT TC scaffold58479 ScafM SNP 0020.scaffold00069 103883 1 T A scaffold58479 ScafM SNP 0020.scaffold00069 103899 1 A C scaffold58479 ScafM SNP 0020.scaffold00069 103906 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 104013 1 G A scaffold58479 ScafM SNP 0020.scaffold00069 104032 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 104046 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 104419 1 G C scaffold58479 ScafM SNP 0020.scaffold00069 104470 1 T G scaffold58479 ScafM INDEL 0020.scaffold00069 104498 3 ... GCA scaffold58479 ScafM SNP 0020.scaffold00069 104507 1 C A scaffold58479 ScafM SNP 0020.scaffold00069 104515 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 104589 2 CC AT scaffold58479 Both SNP 0020.scaffold00069 104608 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 104631 2 TG GA scaffold58479 Both SNP 0020.scaffold00069 104736 1 A T scaffold58479 Both SNP 0020.scaffold00069 104854 1 A T scaffold58479 Both INDEL 0020.scaffold00069 104907 3 AAC ... scaffold58479 ScafM INDEL 0020.scaffold00069 104974 4 .... TATG scaffold58479 Both SNP 0020.scaffold00069 105026 1 G A scaffold58479 ScafM SNP 0020.scaffold00069 105109 1 G C scaffold58479 ScafM SNP 0020.scaffold00069 105137 1 T A scaffold58479 ScafM SNP 0020.scaffold00069 105143 1 C A scaffold58479 ScafM INDEL 0020.scaffold00069 105180 5 ..... ATGAT scaffold58479 ScafM INDEL 0020.scaffold00069 105204 2 .. GA scaffold58479 ScafM INDEL 0020.scaffold00069 105205 2 .. GA scaffold58479 ScafM INDEL 0020.scaffold00069 105209 6 ...... TTTGAA scaffold58479 ScafM SNP 0020.scaffold00069 105229 1 G A scaffold58479 ScafM INDEL 0020.scaffold00069 105243 2 GG .C scaffold58479 ScafM SNP 0020.scaffold00069 105248 1 T A scaffold58479 ScafM INDEL 0020.scaffold00069 105251 2 GG .. scaffold58479 ScafM INDEL 0020.scaffold00069 105254 1 . G scaffold58479 ScafM SNP 0020.scaffold00069 105257 1 A G scaffold58479 ScafM INDEL 0020.scaffold00069 105259 2 CC .T scaffold58479 ScafM SNP 0020.scaffold00069 105263 1 A T scaffold58479 ScafM INDEL 0020.scaffold00069 105265 1 . T scaffold58479 ScafM SNP 0020.scaffold00069 105281 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 105419 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 105514 1 A G scaffold58479 ScafM INDEL 0020.scaffold00069 105517 1 . A scaffold58479 ScafM SNP 0020.scaffold00069 105533 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 105592 1 A C scaffold58479 ScafM INDEL 0020.scaffold00069 105594 4 .... TTCT scaffold58479 ScafM SNP 0020.scaffold00069 105606 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 105811 1 C T scaffold58479 ScafM INDEL 0020.scaffold00069 105839 2 .. AT scaffold58479 ScafM INDEL 0020.scaffold00069 105856 2 AA .G scaffold58479 ScafM SNP 0020.scaffold00069 105861 2 GT AG scaffold58479 ScafM SNP 0020.scaffold00069 105873 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 105878 1 A G scaffold58479 ScafM INDEL 0020.scaffold00069 105900 2 .. AA scaffold58479 ScafM SNP 0020.scaffold00069 105924 1 G T scaffold58479 ScafM SNP 0020.scaffold00069 105956 1 T C scaffold58479 ScafM INDEL 0020.scaffold00069 105996 1 . C scaffold58479 ScafM SNP 0020.scaffold00069 106052 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 106071 1 C T scaffold58479 ScafM INDEL 0020.scaffold00069 106076 1 A . scaffold58479 ScafM SNP 0020.scaffold00069 106086 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 106092 1 G A scaffold58479 ScafM SNP 0020.scaffold00069 106125 1 A C scaffold58479 ScafM SNP 0020.scaffold00069 107321 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 107358 1 A C scaffold58479 ScafM SNP 0020.scaffold00069 107403 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 107430 1 T C scaffold58479 ScafM SNP 0020.scaffold00069 107478 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 107508 1 A T scaffold58479 Both SNP 0020.scaffold00069 107569 1 C T scaffold58479 Both SNP 0020.scaffold00069 107590 1 T C scaffold58479 Both SNP 0020.scaffold00069 107658 1 A T scaffold58479 ScafM SNP 0020.scaffold00069 107700 2 AT TA scaffold58479 ScafM SNP 0020.scaffold00069 107738 1 G T scaffold58479 ScafM INDEL 0020.scaffold00069 107782 1 . T scaffold58479 ScafM SNP 0020.scaffold00069 107888 2 AG TT scaffold58479 Both SNP 0020.scaffold00069 108020 1 G C scaffold58479 Both SNP 0020.scaffold00069 108118 1 G T scaffold58479 Both SNP 0020.scaffold00069 108127 1 C G scaffold58479 ScafM SNP 0020.scaffold00069 108236 1 A G scaffold58479 ScafM SNP 0020.scaffold00069 108283 1 C T scaffold58479 ScafM SNP 0020.scaffold00069 109597 1 C T scaffold10506 ScafM INDEL 0020.scaffold00069 109616 4 .... ATAT scaffold10506 ScafM SNP 0020.scaffold00069 109626 1 A C scaffold10506 ScafM SNP 0020.scaffold00069 110014 1 C T scaffold10506 ScafM INDEL 0020.scaffold00069 110108 4 TAAT .... scaffold10506 ScafM SNP 0020.scaffold00069 110113 1 A G scaffold10506 ScafM SNP 0020.scaffold00069 110118 1 C G scaffold10506 ScafM INDEL 0020.scaffold00069 110182 12 ............ TGCATACATGCA scaffold10506 ScafM INDEL 0020.scaffold00069 110205 7 ....... CGTACTA scaffold10506 Both SNP 0020.scaffold00069 110419 1 T G scaffold10506 ScafM SNP 0020.scaffold00069 110507 1 C A scaffold10506 Both SNP 0020.scaffold00069 110515 1 T A scaffold10506 Both SNP 0020.scaffold00069 110589 1 C T scaffold10506 Both SNP 0020.scaffold00069 110626 1 A T scaffold10506 Both SNP 0020.scaffold00069 110629 1 C T scaffold10506 ScafM SNP 0020.scaffold00069 110649 1 G C scaffold10506 ScafM INDEL 0020.scaffold00069 110655 15 ............... TACACCTTGGCCTAC scaffold10506 ScafM INDEL 0020.scaffold00069 110657 3 ... CAA scaffold10506 ScafM SNP 0020.scaffold00069 110818 1 T G scaffold10506 ScafM SNP 0020.scaffold00069 110860 1 A G scaffold10506 Both SNP 0020.scaffold00069 110878 1 G A scaffold10506 ScafM SNP 0020.scaffold00069 110924 1 C A scaffold10506 ScafM SNP 0020.scaffold00069 110929 1 G A scaffold10506 ScafM SNP 0020.scaffold00069 110931 1 T G scaffold10506 ScafM SNP 0020.scaffold00069 110945 1 A G scaffold10506 ScafM SNP 0020.scaffold00069 110970 1 T A scaffold10506 ScafM SNP 0020.scaffold00069 110975 1 A T scaffold10506 ScafM SNP 0020.scaffold00069 110982 1 G T scaffold10506 Both SNP 0020.scaffold00069 111001 1 T G scaffold10506 Both SNP 0020.scaffold00069 111022 1 G T scaffold10506 Both SNP 0020.scaffold00069 111095 1 A G scaffold10506 ScafM SNP 0020.scaffold00069 111153 1 A T scaffold10506 ScafM INDEL 0020.scaffold00069 111163 3 ... GTT scaffold10506 ScafM SNP 0020.scaffold00069 111193 1 A G scaffold10506 ScafM INDEL 0020.scaffold00069 111212 4 .... TATA scaffold10506 Both SNP 0020.scaffold00069 111231 1 T A scaffold10506 ScafM SNP 0020.scaffold00069 111405 1 C T scaffold10506 ScafM SNP 0020.scaffold00069 111496 2 TT AA scaffold10506 ScafM INDEL 0020.scaffold00069 111505 1 . A scaffold10506 ScafM SNP 0020.scaffold00069 111524 1 G C scaffold10506 ScafM INDEL 0020.scaffold00069 111564 4 .... GCAT scaffold10506 ScafM SNP 0020.scaffold00069 111570 1 C A scaffold10506 ScafM SNP 0020.scaffold00069 111603 1 A T scaffold10506 ScafM SNP 0020.scaffold00069 111663 1 T A scaffold10506 ScafM SNP 0020.scaffold00069 111665 1 C A scaffold10506 ScafM SNP 0020.scaffold00069 111667 1 C A scaffold10506 ScafM SNP 0020.scaffold00069 111670 1 A T scaffold10506 ScafM SNP 0020.scaffold00069 111734 1 G A scaffold10506 ScafM SNP 0020.scaffold00069 111830 1 T G scaffold10506 ScafM INDEL 0020.scaffold00069 112025 1 A . scaffold10506 ScafM SNP 0020.scaffold00069 112093 1 T C scaffold10506 ScafM SNP 0020.scaffold00069 112487 1 T A scaffold15922 ScafM SNP 0020.scaffold00069 112524 1 A C scaffold15922 ScafM SNP 0020.scaffold00069 112593 1 C G scaffold15922 ScafM SNP 0020.scaffold00069 112610 1 A G scaffold15922 ScafM SNP 0020.scaffold00069 112620 1 T C scaffold15922 ScafM INDEL 0020.scaffold00069 112633 1 A . scaffold15922 ScafM SNP 0020.scaffold00069 112637 1 A G scaffold15922 ScafM SNP 0020.scaffold00069 112647 1 G T scaffold15922 ScafM SNP 0020.scaffold00069 112776 1 T C scaffold15922 ScafM SNP 0020.scaffold00069 112849 1 T G scaffold15922 ScafM SNP 0020.scaffold00069 112880 1 A G scaffold15922 ScafM SNP 0020.scaffold00069 112907 1 G A scaffold15922 ScafM SNP 0020.scaffold00069 112929 1 C T scaffold15922 ScafM SNP 0020.scaffold00069 112937 1 A G scaffold15922 ScafM SNP 0020.scaffold00069 113014 1 T G scaffold15922 ScafM INDEL 0020.scaffold00069 113083 1 . C scaffold15922 ScafM INDEL 0020.scaffold00069 113717 5 AAAAG ..... scaffold46302 ScafM INDEL 0020.scaffold00069 113904 5 ..... ATATC scaffold46302 ReadM SNP 0020.scaffold00069 114257 1 G T - ReadM SNP 0020.scaffold00069 114474 1 T C - ReadM SNP 0020.scaffold00069 114784 1 T C - ReadM SNP 0020.scaffold00069 114986 1 T C - ReadM SNP 0020.scaffold00069 115401 1 C G - ReadM SNP 0020.scaffold00069 115426 1 C T - ReadM SNP 0020.scaffold00069 115474 1 C T - ReadM SNP 0020.scaffold00069 116647 1 A C - ReadM SNP 0020.scaffold00069 116662 1 C T - ReadM SNP 0020.scaffold00069 116832 1 G A - ReadM SNP 0020.scaffold00069 117748 1 G T - Both INDEL 0020.scaffold00069 118081 1 . T scaffold21200 ScafM SNP 0020.scaffold00069 118293 1 G T scaffold21200 ReadM SNP 0020.scaffold00069 118776 1 A G - Both INDEL 0020.scaffold00069 118797 1 A . scaffold21200 Both SNP 0020.scaffold00069 118881 1 G A scaffold21200 ScafM SNP 0020.scaffold00069 120080 1 C T scaffold21200 ReadM SNP 0020.scaffold00069 122571 1 T C - ScafM SNP 0020.scaffold00069 123415 1 C A scaffold21200 Both SNP 0020.scaffold00069 123639 1 T G scaffold21200 ScafM SNP 0020.scaffold00069 123649 1 A C scaffold21200 Both SNP 0020.scaffold00069 123652 1 C T scaffold21200 Both INDEL 0020.scaffold00069 123732 1 . C scaffold21200 ScafM INDEL 0020.scaffold00069 124001 1 A . scaffold21200 Both SNP 0020.scaffold00069 124192 1 A G scaffold21200 ScafM SNP 0020.scaffold00069 124223 1 G C scaffold21200 Both INDEL 0020.scaffold00069 124267 1 A . scaffold21200 ScafM SNP 0020.scaffold00069 124302 1 A C scaffold21200 ReadM SNP 0020.scaffold00069 124620 1 T C - ReadM SNP 0020.scaffold00069 124915 1 A G - ReadM SNP 0020.scaffold00069 125041 1 A G - Both SNP 0020.scaffold00069 125167 1 G T scaffold21200 Both SNP 0020.scaffold00069 125259 1 T A scaffold21200 ScafM SNP 0020.scaffold00069 125294 1 G C scaffold21200 ScafM SNP 0020.scaffold00069 125537 1 C G scaffold21200 ScafM INDEL 0020.scaffold00069 125725 1 . T scaffold21200 Both SNP 0020.scaffold00069 125738 1 A C scaffold21200 ScafM SNP 0020.scaffold00069 126009 1 A T scaffold21200 ScafM SNP 0020.scaffold00069 126036 1 C T scaffold21200 ScafM SNP 0020.scaffold00069 127269 1 C T scaffold21200 ScafM SNP 0020.scaffold00069 127307 1 G A scaffold21200 ScafM SNP 0020.scaffold00069 127864 2 TC AT scaffold21200 ScafM SNP 0020.scaffold00069 127892 1 C T scaffold21200 ReadM SNP 0020.scaffold00069 128089 1 C T - ScafM INDEL 0020.scaffold00069 128516 4 GGAG .... scaffold21200 ScafM SNP 0020.scaffold00069 128985 1 T C scaffold21200 ScafM INDEL 0020.scaffold00069 129083 1 T . scaffold21200 ScafM SNP 0020.scaffold00069 129105 1 C T scaffold21200 ScafM SNP 0020.scaffold00069 129166 1 A G scaffold21200 ScafM SNP 0020.scaffold00069 129198 1 G A scaffold21200 ScafM INDEL 0020.scaffold00069 129240 1 T . scaffold21200 ScafM SNP 0020.scaffold00069 129244 1 G A scaffold21200 ScafM SNP 0020.scaffold00069 129267 2 AA TT scaffold21200 ScafM SNP 0020.scaffold00069 133038 1 C T scaffold45153 Both SNP 0020.scaffold00069 133106 1 G A scaffold45153 Both SNP 0020.scaffold00069 133339 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 133462 1 T G scaffold45153 ScafM SNP 0020.scaffold00069 133464 1 G T scaffold45153 ScafM SNP 0020.scaffold00069 134118 1 G C scaffold45153 ReadM SNP 0020.scaffold00069 134393 1 A G - ReadM SNP 0020.scaffold00069 134458 1 T C - ReadM SNP 0020.scaffold00069 134552 1 T A - ReadM SNP 0020.scaffold00069 134675 1 G A - ReadM SNP 0020.scaffold00069 134759 1 A T - ScafM SNP 0020.scaffold00069 135077 1 G A scaffold45153 ScafM SNP 0020.scaffold00069 135172 1 G T scaffold45153 Both SNP 0020.scaffold00069 135954 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 136233 1 T A scaffold45153 ScafM SNP 0020.scaffold00069 136249 1 G C scaffold45153 ScafM SNP 0020.scaffold00069 136360 1 T C scaffold45153 ScafM SNP 0020.scaffold00069 136385 1 T C scaffold45153 ReadM SNP 0020.scaffold00069 136554 1 T C - ReadM SNP 0020.scaffold00069 136580 1 C T - ReadM SNP 0020.scaffold00069 136602 1 C T - ScafM INDEL 0020.scaffold00069 136745 3 ... CGT scaffold45153 Both SNP 0020.scaffold00069 136909 1 T C scaffold45153 Both SNP 0020.scaffold00069 137143 1 C T scaffold45153 ReadM SNP 0020.scaffold00069 137670 1 C G - ScafM INDEL 0020.scaffold00069 137898 4 TTTT .... scaffold45153 ScafM SNP 0020.scaffold00069 138126 1 T C scaffold45153 ScafM SNP 0020.scaffold00069 138160 1 C G scaffold45153 ScafM SNP 0020.scaffold00069 138183 1 T C scaffold45153 Both SNP 0020.scaffold00069 138253 1 T G scaffold45153 ScafM SNP 0020.scaffold00069 138290 1 G A scaffold45153 ScafM INDEL 0020.scaffold00069 138297 7 TTTTCAA ....... scaffold45153 ScafM INDEL 0020.scaffold00069 138305 2 AT .. scaffold45153 ScafM SNP 0020.scaffold00069 138332 1 A G scaffold45153 ScafM SNP 0020.scaffold00069 138351 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 138367 1 A T scaffold45153 ScafM SNP 0020.scaffold00069 138371 1 C G scaffold45153 ReadM INDEL 0020.scaffold00069 138450 1 T . - ScafM SNP 0020.scaffold00069 138462 1 T C scaffold45153 ScafM SNP 0020.scaffold00069 138475 1 A C scaffold45153 ScafM SNP 0020.scaffold00069 138489 1 G A scaffold45153 ScafM INDEL 0020.scaffold00069 138491 2 .A GG scaffold45153 ReadM SNP 0020.scaffold00069 138492 1 A G - ScafM SNP 0020.scaffold00069 138530 2 AT GC scaffold45153 ScafM SNP 0020.scaffold00069 138576 1 C G scaffold45153 ScafM SNP 0020.scaffold00069 138591 1 A G scaffold45153 ReadM INDEL 0020.scaffold00069 138996 1 . A - ScafM INDEL 0020.scaffold00069 138996 2 .C AA scaffold45153 ReadM SNP 0020.scaffold00069 139150 1 T C - ReadM SNP 0020.scaffold00069 139254 1 C A - ReadM SNP 0020.scaffold00069 139259 1 A G - Both SNP 0020.scaffold00069 139687 1 G C scaffold45153 Both SNP 0020.scaffold00069 139702 1 G A scaffold45153 ReadM SNP 0020.scaffold00069 139754 1 C T - Both SNP 0020.scaffold00069 140098 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 140353 1 A G scaffold45153 ScafM SNP 0020.scaffold00069 140439 1 G C scaffold45153 ScafM SNP 0020.scaffold00069 140694 1 A T scaffold45153 ScafM SNP 0020.scaffold00069 140709 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 140812 1 A G scaffold45153 ScafM SNP 0020.scaffold00069 140823 1 T C scaffold45153 ScafM INDEL 0020.scaffold00069 140824 3 ... AAA scaffold45153 ScafM SNP 0020.scaffold00069 140825 1 C A scaffold45153 ScafM INDEL 0020.scaffold00069 140952 1 . T scaffold45153 ScafM SNP 0020.scaffold00069 141036 1 C T scaffold45153 ScafM SNP 0020.scaffold00069 141066 1 A C scaffold45153 ScafM INDEL 0020.scaffold00069 141155 4 CGTA .... scaffold45153 ScafM SNP 0020.scaffold00069 141272 1 C A scaffold45153 ScafM SNP 0020.scaffold00069 141405 1 C T scaffold45153 Both SNP 0020.scaffold00069 141428 1 C G scaffold45153 ScafM SNP 0020.scaffold00069 141675 1 G A scaffold32704 ScafM SNP 0020.scaffold00069 141732 1 T G scaffold32704 ScafM SNP 0020.scaffold00069 141734 1 A G scaffold32704 ScafM SNP 0020.scaffold00069 141768 1 A G scaffold32704 ScafM INDEL 0020.scaffold00069 141788 6 ...... ACAGTA scaffold32704 ScafM SNP 0020.scaffold00069 141801 1 T C scaffold32704 ScafM SNP 0020.scaffold00069 141810 2 TC AA scaffold32704 ScafM SNP 0020.scaffold00069 141817 1 G A scaffold32704 ScafM SNP 0020.scaffold00069 141824 1 C A scaffold32704 ScafM SNP 0020.scaffold00069 141828 1 G T scaffold32704 ScafM SNP 0020.scaffold00069 141836 1 G A scaffold32704 ScafM SNP 0020.scaffold00069 141851 1 G A scaffold32704 ScafM SNP 0020.scaffold00069 141876 1 T G scaffold32704 ScafM SNP 0020.scaffold00069 141883 2 AC CA scaffold32704 ScafM SNP 0020.scaffold00069 142030 1 A C scaffold63968 ScafM SNP 0020.scaffold00069 142033 2 TG GA scaffold63968 ScafM SNP 0020.scaffold00069 142050 1 C T scaffold63968 ScafM SNP 0020.scaffold00069 142109 1 T A scaffold63968 ScafM SNP 0020.scaffold00069 142119 1 G C scaffold63968 ScafM SNP 0020.scaffold00069 142132 1 T G scaffold63968 ScafM SNP 0020.scaffold00069 142183 1 A G scaffold63968 ScafM SNP 0020.scaffold00069 142192 1 T G scaffold63968 ScafM INDEL 0020.scaffold00069 142311 1 . A scaffold63968 ScafM SNP 0020.scaffold00069 142343 1 A C scaffold63968 ScafM SNP 0020.scaffold00069 142351 1 G T scaffold63968 ScafM INDEL 0020.scaffold00069 142428 26 .......................... AGAAGTATTTCCATCAAAAAAAAAAA scaffold63968 ScafM INDEL 0020.scaffold00069 142430 1 . G scaffold63968 ScafM SNP 0020.scaffold00069 142434 1 C T scaffold63968 ScafM SNP 0020.scaffold00069 142440 1 A C scaffold63968 ScafM SNP 0020.scaffold00069 142455 1 G C scaffold63968 ScafM SNP 0020.scaffold00069 142463 1 C G scaffold63968 ScafM SNP 0020.scaffold00069 142497 1 T C scaffold63968 ScafM INDEL 0020.scaffold00069 142526 1 T . scaffold63968 Both SNP 0020.scaffold00069 142563 1 A G scaffold63968 ScafM SNP 0020.scaffold00069 142674 1 T C scaffold63968 ScafM SNP 0020.scaffold00069 142685 1 A G scaffold63968 ScafM INDEL 0020.scaffold00069 142739 4 TTGT .... scaffold63968 ScafM SNP 0020.scaffold00069 142757 1 G C scaffold63968 ScafM INDEL 0020.scaffold00069 142822 1 A . scaffold63968 ScafM SNP 0020.scaffold00069 142833 1 A G scaffold63968 ScafM SNP 0020.scaffold00069 142841 1 C T scaffold63968 ScafM SNP 0020.scaffold00069 142847 1 T G scaffold63968 ScafM INDEL 0020.scaffold00069 142857 1 A . scaffold63968 ScafM SNP 0020.scaffold00069 142868 1 C T scaffold63968 ReadM INDEL 0020.scaffold00069 143048 1 . G - ReadM SNP 0020.scaffold00069 143411 1 A G - ReadM INDEL 0020.scaffold00069 143734 1 T . - ReadM SNP 0020.scaffold00069 143962 1 C G - ReadM SNP 0020.scaffold00069 144227 1 G T - ScafM SNP 0020.scaffold00069 145557 1 G T scaffold37012 ScafM SNP 0020.scaffold00069 145576 1 G C scaffold37012 ScafM SNP 0020.scaffold00069 145624 2 AG GA scaffold37012 ScafM SNP 0020.scaffold00069 145655 1 A C scaffold37012 ScafM SNP 0020.scaffold00069 145672 1 T C scaffold37012 ScafM INDEL 0020.scaffold00069 145722 8 ........ TGCGCAAC scaffold37012 ScafM SNP 0020.scaffold00069 145742 1 C A scaffold37012 ScafM SNP 0020.scaffold00069 146071 1 T A scaffold37012 ScafM SNP 0020.scaffold00069 146074 1 A C scaffold37012 ScafM SNP 0020.scaffold00069 146112 2 AG TA scaffold37012 ScafM SNP 0020.scaffold00069 146156 1 G T scaffold37012 ScafM SNP 0020.scaffold00069 146162 2 AG GA scaffold37012 Both INDEL 0020.scaffold00069 146335 1 G . scaffold37012 ScafM INDEL 0020.scaffold00069 146368 1 . A scaffold37012 ScafM SNP 0020.scaffold00069 146570 1 G A scaffold37012 ScafM SNP 0020.scaffold00069 146581 1 G A scaffold37012 Both INDEL 0020.scaffold00069 146735 1 . A scaffold37012 Both SNP 0020.scaffold00069 146912 1 A C scaffold37012 ScafM SNP 0020.scaffold00069 146937 1 G A scaffold37012 ScafM SNP 0020.scaffold00069 146981 1 G A scaffold37012 ScafM SNP 0020.scaffold00069 147041 1 T C scaffold37012 ScafM SNP 0020.scaffold00069 147046 2 CT TG scaffold37012 ScafM SNP 0020.scaffold00069 147053 1 C T scaffold37012 ScafM SNP 0020.scaffold00069 147167 1 C A scaffold37012 ReadM SNP 0020.scaffold00069 147175 1 A G - ScafM SNP 0020.scaffold00069 147186 1 C A scaffold37012 ScafM SNP 0020.scaffold00069 147189 1 G C scaffold37012 Both SNP 0020.scaffold00069 147207 1 A G scaffold37012 Both SNP 0020.scaffold00069 147209 1 C T scaffold37012 ScafM SNP 0020.scaffold00069 147251 1 G A scaffold37012 Both SNP 0020.scaffold00069 147260 1 C T scaffold37012 ScafM SNP 0020.scaffold00069 147319 1 A G scaffold37012 Both SNP 0020.scaffold00069 147338 1 T C scaffold37012 ScafM SNP 0020.scaffold00069 147357 2 TT AC scaffold37012 ReadM SNP 0020.scaffold00069 148070 1 A G - ReadM SNP 0020.scaffold00069 148346 1 C T - ReadM SNP 0020.scaffold00069 148473 1 C G - ReadM SNP 0020.scaffold00069 148830 1 C G - ReadM SNP 0020.scaffold00069 149111 1 A G - ReadM SNP 0020.scaffold00069 149739 1 T C - ReadM SNP 0020.scaffold00069 149747 1 T C - ReadM INDEL 0020.scaffold00069 149773 1 . T - ReadM INDEL 0020.scaffold00069 149774 1 . A - ReadM INDEL 0020.scaffold00069 149905 1 A . - ReadM SNP 0020.scaffold00069 149945 1 G A - ScafM SNP 0020.scaffold00069 150939 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 150972 1 G A scaffold5197 ScafM SNP 0020.scaffold00069 150988 1 C A scaffold5197 ScafM SNP 0020.scaffold00069 151005 1 C G scaffold5197 ScafM SNP 0020.scaffold00069 151117 1 G A scaffold5197 ScafM SNP 0020.scaffold00069 151178 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 151185 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 151219 1 A C scaffold5197 Both SNP 0020.scaffold00069 151306 1 A C scaffold5197 ScafM SNP 0020.scaffold00069 151364 1 A T scaffold5197 ScafM SNP 0020.scaffold00069 151531 1 C A scaffold5197 ScafM SNP 0020.scaffold00069 151559 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 151568 1 A G scaffold5197 ScafM SNP 0020.scaffold00069 151579 1 A T scaffold5197 ScafM SNP 0020.scaffold00069 151591 1 C T scaffold5197 Both SNP 0020.scaffold00069 151593 1 A G scaffold5197 ScafM SNP 0020.scaffold00069 151600 1 T C scaffold5197 ScafM INDEL 0020.scaffold00069 151608 8 GACTTGAT ........ scaffold5197 ScafM SNP 0020.scaffold00069 151660 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 151680 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 151703 1 G T scaffold5197 ScafM SNP 0020.scaffold00069 151715 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 151738 1 A G scaffold5197 ScafM SNP 0020.scaffold00069 151771 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 151785 1 T C scaffold5197 Both SNP 0020.scaffold00069 151789 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 151805 1 T G scaffold5197 Both SNP 0020.scaffold00069 151808 1 A T scaffold5197 ReadM SNP 0020.scaffold00069 151834 1 C T - ScafM SNP 0020.scaffold00069 151838 2 CA TG scaffold5197 ScafM SNP 0020.scaffold00069 151896 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 151905 1 T G scaffold5197 ScafM SNP 0020.scaffold00069 151907 1 C T scaffold5197 ScafM SNP 0020.scaffold00069 151943 1 C T scaffold5197 ScafM INDEL 0020.scaffold00069 151974 2 AT .. scaffold5197 ScafM INDEL 0020.scaffold00069 152076 8 TCCGTCAA ........ scaffold5197 ScafM INDEL 0020.scaffold00069 152087 1 C . scaffold5197 ScafM SNP 0020.scaffold00069 152126 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 152172 1 T C scaffold5197 Both SNP 0020.scaffold00069 152209 1 T C scaffold5197 ScafM SNP 0020.scaffold00069 152230 1 T C scaffold5197 ScafM INDEL 0020.scaffold00069 152255 1 . A scaffold5197 Both SNP 0020.scaffold00069 152292 1 C T scaffold5197 ReadM INDEL 0020.scaffold00069 152584 1 A . - ReadM INDEL 0020.scaffold00069 152858 2 GT .. - ReadM SNP 0020.scaffold00069 152954 1 A G - ReadM SNP 0020.scaffold00069 153171 1 T A - ReadM SNP 0020.scaffold00069 153173 1 T G - ScafM SNP 0020.scaffold00069 153639 1 T G scaffold27224 ScafM INDEL 0020.scaffold00069 154043 2 TT .. scaffold27224 ScafM SNP 0020.scaffold00069 154071 1 G C scaffold27224 Both SNP 0020.scaffold00069 154099 1 G A scaffold27224 Both SNP 0020.scaffold00069 154104 1 G A scaffold27224 Both SNP 0020.scaffold00069 154156 1 G C scaffold27224 Both SNP 0020.scaffold00069 154193 1 C T scaffold27224 Both SNP 0020.scaffold00069 154225 1 A T scaffold27224 ScafM SNP 0020.scaffold00069 154248 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 154311 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 154639 1 A C scaffold27224 ReadM SNP 0020.scaffold00069 154843 1 T C - ReadM INDEL 0020.scaffold00069 154861 1 C . - ScafM SNP 0020.scaffold00069 155107 1 G A scaffold27224 Both SNP 0020.scaffold00069 155113 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 155142 1 A C scaffold27224 ScafM INDEL 0020.scaffold00069 155144 1 G . scaffold27224 ScafM SNP 0020.scaffold00069 155166 1 G T scaffold27224 ReadM SNP 0020.scaffold00069 155598 1 A G - ReadM SNP 0020.scaffold00069 155771 1 A C - ReadM SNP 0020.scaffold00069 155936 1 T C - ReadM SNP 0020.scaffold00069 155968 1 T A - ReadM SNP 0020.scaffold00069 156035 1 A C - ReadM SNP 0020.scaffold00069 156067 1 C G - ReadM INDEL 0020.scaffold00069 156115 1 A . - ScafM SNP 0020.scaffold00069 156231 1 A T scaffold27224 Both SNP 0020.scaffold00069 156253 1 A G scaffold27224 Both SNP 0020.scaffold00069 156267 1 C A scaffold27224 ReadM SNP 0020.scaffold00069 156361 1 A G - ReadM SNP 0020.scaffold00069 156390 1 A C - ReadM SNP 0020.scaffold00069 156468 1 G A - ReadM SNP 0020.scaffold00069 156474 1 A G - ScafM SNP 0020.scaffold00069 156514 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 156536 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 156538 1 C T scaffold27224 ScafM SNP 0020.scaffold00069 156809 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 156822 1 T C scaffold27224 ScafM SNP 0020.scaffold00069 156839 1 G T scaffold27224 ScafM SNP 0020.scaffold00069 157293 1 T G scaffold27224 ScafM SNP 0020.scaffold00069 157341 1 G T scaffold27224 ScafM SNP 0020.scaffold00069 157816 1 C T scaffold27224 ReadM SNP 0020.scaffold00069 157928 1 T C - ReadM SNP 0020.scaffold00069 157962 1 G C - ReadM SNP 0020.scaffold00069 157997 1 T C - ScafM INDEL 0020.scaffold00069 158818 2 .G AA scaffold27224 ScafM SNP 0020.scaffold00069 158834 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 158839 2 GA AG scaffold27224 ScafM SNP 0020.scaffold00069 158856 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 158872 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 158891 1 C T scaffold27224 ScafM SNP 0020.scaffold00069 158902 1 G T scaffold27224 ScafM SNP 0020.scaffold00069 158920 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 158953 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 158958 1 C T scaffold27224 ScafM SNP 0020.scaffold00069 158979 1 A G scaffold27224 ScafM INDEL 0020.scaffold00069 158981 4 ...T GCAG scaffold27224 ScafM SNP 0020.scaffold00069 159026 1 A G scaffold27224 ScafM INDEL 0020.scaffold00069 159046 1 . C scaffold27224 ScafM INDEL 0020.scaffold00069 159047 2 .. CG scaffold27224 ScafM SNP 0020.scaffold00069 159049 2 AG GA scaffold27224 ScafM SNP 0020.scaffold00069 159083 1 A G scaffold27224 ScafM INDEL 0020.scaffold00069 159145 1 G . scaffold27224 ScafM SNP 0020.scaffold00069 159149 1 T C scaffold27224 Both SNP 0020.scaffold00069 159189 1 C T scaffold27224 ScafM SNP 0020.scaffold00069 159194 1 T C scaffold27224 ScafM SNP 0020.scaffold00069 159202 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 159207 1 G A scaffold27224 ReadM INDEL 0020.scaffold00069 159220 1 . A - ScafM SNP 0020.scaffold00069 159246 1 A T scaffold27224 Both SNP 0020.scaffold00069 159252 1 T C scaffold27224 ScafM SNP 0020.scaffold00069 159275 1 T C scaffold27224 Both SNP 0020.scaffold00069 159309 1 T C scaffold27224 Both SNP 0020.scaffold00069 159320 1 A G scaffold27224 ScafM SNP 0020.scaffold00069 159428 1 G A scaffold27224 ScafM SNP 0020.scaffold00069 159449 2 AT CC scaffold27224 ScafM SNP 0020.scaffold00069 159472 1 T C scaffold27224 ScafM SNP 0020.scaffold00069 159478 1 A T scaffold27224 ReadM SNP 0020.scaffold00069 159586 1 G A - ReadM INDEL 0020.scaffold00069 159645 1 T . - Both SNP 0020.scaffold00069 159752 1 C T scaffold27224 ScafM SNP 0020.scaffold00069 160059 1 A C scaffold27224 ScafM SNP 0020.scaffold00069 160072 1 A G scaffold27224 ScafM INDEL 0020.scaffold00069 160110 7 ....... TTTTTTA scaffold27224 ScafM SNP 0020.scaffold00069 160135 1 C A scaffold27224 ScafM SNP 0020.scaffold00069 160454 2 AA TT scaffold55188 ScafM SNP 0020.scaffold00069 160461 1 C T scaffold55188 ScafM SNP 0020.scaffold00069 160484 1 T C scaffold55188 ScafM SNP 0020.scaffold00069 160528 1 C T scaffold55188 ScafM SNP 0020.scaffold00069 160600 1 T G scaffold55188 ScafM SNP 0020.scaffold00069 160618 1 C A scaffold55188 ScafM INDEL 0020.scaffold00069 160632 6 ...... CTGTGC scaffold55188 ReadM SNP 0020.scaffold00069 161951 1 A T - ReadM SNP 0020.scaffold00069 161964 1 T G - ReadM SNP 0020.scaffold00069 162550 1 G A - ReadM SNP 0020.scaffold00069 162668 1 T G - ReadM SNP 0020.scaffold00069 162711 1 T C - ReadM SNP 0020.scaffold00069 162731 1 C A - ReadM SNP 0020.scaffold00069 163574 1 T A - Both SNP 0020.scaffold00069 163644 1 C T scaffold26985 ScafM SNP 0020.scaffold00069 163812 1 C T scaffold26985 ScafM SNP 0020.scaffold00069 163849 1 T A scaffold26985 Both SNP 0020.scaffold00069 163891 1 A G scaffold26985 ScafM SNP 0020.scaffold00069 163956 1 A C scaffold26985 ScafM SNP 0020.scaffold00069 163961 1 T C scaffold26985 ScafM SNP 0020.scaffold00069 164027 1 C G scaffold26985 ScafM SNP 0020.scaffold00069 164049 1 A T scaffold26985 ScafM SNP 0020.scaffold00069 164079 1 T C scaffold26985 ScafM SNP 0020.scaffold00069 164081 1 C T scaffold26985 ScafM SNP 0020.scaffold00069 164095 1 A T scaffold26985 ScafM SNP 0020.scaffold00069 164109 1 T A scaffold26985 ScafM SNP 0020.scaffold00069 164111 1 T C scaffold26985 ScafM SNP 0020.scaffold00069 164226 1 T C scaffold26985 Both SNP 0020.scaffold00069 164605 1 A C scaffold26985 ReadM SNP 0020.scaffold00069 164737 1 G T - ReadM SNP 0020.scaffold00069 165566 1 A C - ScafM SNP 0020.scaffold00069 165797 1 A T scaffold64380 ScafM SNP 0020.scaffold00069 165834 1 A T scaffold64380 ScafM SNP 0020.scaffold00069 165870 1 A C scaffold64380 ScafM SNP 0020.scaffold00069 165900 1 C T scaffold64380 ScafM SNP 0020.scaffold00069 165950 1 T C scaffold64380 ScafM SNP 0020.scaffold00069 165984 1 T C scaffold64380 ScafM INDEL 0020.scaffold00069 165989 1 T . scaffold64380 ScafM SNP 0020.scaffold00069 166006 1 G T scaffold64380 ScafM SNP 0020.scaffold00069 166015 1 A C scaffold64380 ScafM SNP 0020.scaffold00069 166090 1 G A scaffold64380 ScafM INDEL 0020.scaffold00069 166280 3 TAG ... scaffold64380 ScafM SNP 0020.scaffold00069 166445 1 C A scaffold64380 ScafM SNP 0020.scaffold00069 166494 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 166530 1 G T scaffold64380 ScafM SNP 0020.scaffold00069 166579 1 G C scaffold64380 ScafM SNP 0020.scaffold00069 166583 1 C T scaffold64380 ScafM SNP 0020.scaffold00069 166591 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 166609 1 G A scaffold64380 ScafM INDEL 0020.scaffold00069 166628 2 .. GT scaffold64380 ScafM INDEL 0020.scaffold00069 166630 10 .......... ATTTTGGGGG scaffold64380 ScafM INDEL 0020.scaffold00069 166632 1 . T scaffold64380 ScafM INDEL 0020.scaffold00069 166634 3 ... GAG scaffold64380 ScafM SNP 0020.scaffold00069 166693 1 T C scaffold64380 Both SNP 0020.scaffold00069 166710 1 G A scaffold64380 Both SNP 0020.scaffold00069 166835 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 167074 1 C A scaffold64380 ScafM SNP 0020.scaffold00069 167100 1 C T scaffold64380 ScafM SNP 0020.scaffold00069 167113 1 T C scaffold64380 ScafM SNP 0020.scaffold00069 167118 1 T C scaffold64380 Both SNP 0020.scaffold00069 167133 1 A C scaffold64380 ScafM SNP 0020.scaffold00069 167182 1 T C scaffold64380 ScafM SNP 0020.scaffold00069 167197 1 A G scaffold64380 ScafM INDEL 0020.scaffold00069 167227 1 G . scaffold64380 Both SNP 0020.scaffold00069 167243 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 167534 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 167567 1 T G scaffold64380 ScafM SNP 0020.scaffold00069 167596 1 T C scaffold64380 ScafM INDEL 0020.scaffold00069 167642 2 .. TC scaffold64380 ScafM SNP 0020.scaffold00069 167649 1 T A scaffold64380 ScafM SNP 0020.scaffold00069 167742 1 C T scaffold64380 ScafM SNP 0020.scaffold00069 167755 1 T G scaffold64380 ScafM SNP 0020.scaffold00069 167819 1 A T scaffold64380 ScafM SNP 0020.scaffold00069 167868 1 G T scaffold64380 ScafM SNP 0020.scaffold00069 167946 2 CA TG scaffold64380 ScafM SNP 0020.scaffold00069 167950 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 168093 1 A G scaffold64380 ScafM INDEL 0020.scaffold00069 168096 2 TT .. scaffold64380 ScafM SNP 0020.scaffold00069 168141 1 A G scaffold64380 Both SNP 0020.scaffold00069 168360 1 G A scaffold64380 ScafM SNP 0020.scaffold00069 168417 1 A G scaffold64380 ScafM SNP 0020.scaffold00069 168502 1 C T scaffold64380 ScafM INDEL 0020.scaffold00069 168511 1 . T scaffold64380 ScafM INDEL 0020.scaffold00069 168520 1 . T scaffold64380 ScafM SNP 0020.scaffold00069 168555 1 C T scaffold64380 ScafM SNP 0020.scaffold00069 168583 1 A G scaffold64380 ScafM SNP 0020.scaffold00069 168604 1 C A scaffold64380 ReadM SNP 0020.scaffold00069 168867 1 C T - ReadM SNP 0020.scaffold00069 168986 1 A G - ScafM SNP 0020.scaffold00069 169207 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 169254 1 G T scaffold18819 ReadM SNP 0020.scaffold00069 169255 1 T C - ScafM SNP 0020.scaffold00069 169265 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 169267 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 169306 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 169468 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 169590 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 169650 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 169668 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 169670 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 169710 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 169746 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 169755 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 169803 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 170124 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 170195 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 170251 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 170253 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 170296 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 170328 1 A T scaffold18819 Both SNP 0020.scaffold00069 170334 1 C A scaffold18819 Both SNP 0020.scaffold00069 170511 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 170593 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 170680 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 170696 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 170790 2 AC CT scaffold18819 ScafM SNP 0020.scaffold00069 170797 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 170812 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 170873 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 170908 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 171021 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 171057 1 G T scaffold18819 Both SNP 0020.scaffold00069 171114 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 171124 1 C T scaffold18819 Both SNP 0020.scaffold00069 171198 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 171203 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 171222 1 G A scaffold18819 Both SNP 0020.scaffold00069 171244 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 171255 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 171296 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 171360 1 G C scaffold18819 ScafM SNP 0020.scaffold00069 171364 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 171524 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 171538 1 A G scaffold18819 ScafM INDEL 0020.scaffold00069 171560 1 T . scaffold18819 ScafM SNP 0020.scaffold00069 171594 1 A G scaffold18819 ScafM INDEL 0020.scaffold00069 171599 2 TG .. scaffold18819 ScafM INDEL 0020.scaffold00069 171620 1 . A scaffold18819 ScafM SNP 0020.scaffold00069 171630 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 171637 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 171656 2 CT TA scaffold18819 ReadM SNP 0020.scaffold00069 171657 1 T A - ScafM SNP 0020.scaffold00069 171659 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 171674 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 171710 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 171794 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 171809 1 A C scaffold18819 ScafM INDEL 0020.scaffold00069 171836 1 G . scaffold18819 ScafM SNP 0020.scaffold00069 171843 1 A T scaffold18819 ReadM SNP 0020.scaffold00069 171849 1 G T - ReadM SNP 0020.scaffold00069 171862 1 G A - ScafM SNP 0020.scaffold00069 171886 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 171894 1 T A scaffold18819 ReadM SNP 0020.scaffold00069 171896 1 T C - Both SNP 0020.scaffold00069 171934 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 171942 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 171949 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 171960 1 A G scaffold18819 ScafM INDEL 0020.scaffold00069 172011 2 .T CA scaffold18819 ScafM SNP 0020.scaffold00069 172031 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 172086 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 172093 1 C A scaffold18819 ReadM SNP 0020.scaffold00069 172247 1 G A - Both SNP 0020.scaffold00069 172641 1 A T scaffold24411 Both SNP 0020.scaffold00069 172806 1 A G scaffold24411 ScafM SNP 0020.scaffold00069 172865 1 G C scaffold24411 ScafM INDEL 0020.scaffold00069 172867 7 GGTGAGC ....... scaffold24411 ScafM SNP 0020.scaffold00069 172940 1 T C scaffold24411 Both SNP 0020.scaffold00069 173064 1 C A scaffold24411 Both SNP 0020.scaffold00069 173261 1 A G scaffold24411 ReadM INDEL 0020.scaffold00069 173501 1 G . - ReadM INDEL 0020.scaffold00069 173689 1 . G - ScafM SNP 0020.scaffold00069 173785 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 173896 1 C A scaffold18819 ScafM INDEL 0020.scaffold00069 173991 2 TG .. scaffold18819 Both INDEL 0020.scaffold00069 174092 1 T . scaffold18819 ReadM SNP 0020.scaffold00069 174238 1 G A - ReadM INDEL 0020.scaffold00069 174421 1 T . - ReadM SNP 0020.scaffold00069 174638 1 C T - ReadM SNP 0020.scaffold00069 174677 1 T C - ReadM SNP 0020.scaffold00069 174930 1 T G - ReadM SNP 0020.scaffold00069 174935 1 A G - ScafM SNP 0020.scaffold00069 175531 1 C G scaffold18819 Both SNP 0020.scaffold00069 175564 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 175599 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 175818 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 175821 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 175827 1 G C scaffold18819 ScafM SNP 0020.scaffold00069 175847 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 175849 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 175861 1 A G scaffold18819 ScafM INDEL 0020.scaffold00069 175871 5 ATATC ..... scaffold18819 ScafM INDEL 0020.scaffold00069 175905 1 A . scaffold18819 ReadM SNP 0020.scaffold00069 175940 1 C T - ScafM SNP 0020.scaffold00069 175962 1 G T scaffold18819 ScafM INDEL 0020.scaffold00069 175966 6 ...... ATATGC scaffold18819 Both SNP 0020.scaffold00069 175995 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 176083 1 A T scaffold18819 Both SNP 0020.scaffold00069 176087 1 A G scaffold18819 Both SNP 0020.scaffold00069 176193 1 G A scaffold18819 Both SNP 0020.scaffold00069 176197 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 176225 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 176227 1 G A scaffold18819 ScafM INDEL 0020.scaffold00069 176237 1 . A scaffold18819 ScafM INDEL 0020.scaffold00069 176238 3 ... ATC scaffold18819 ScafM SNP 0020.scaffold00069 176243 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 176246 1 T C scaffold18819 Both SNP 0020.scaffold00069 176266 1 G C scaffold18819 Both SNP 0020.scaffold00069 176277 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 176325 1 T G scaffold18819 Both SNP 0020.scaffold00069 176389 1 A T scaffold18819 ScafM INDEL 0020.scaffold00069 176407 5 ..... AACAA scaffold18819 ScafM INDEL 0020.scaffold00069 176461 1 . C scaffold18819 ReadM SNP 0020.scaffold00069 176466 1 A T - ScafM SNP 0020.scaffold00069 176473 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 176483 1 A T scaffold18819 ScafM INDEL 0020.scaffold00069 176503 8 ........ TTTTATGC scaffold18819 ScafM INDEL 0020.scaffold00069 176506 2 .. TA scaffold18819 ReadM SNP 0020.scaffold00069 176507 1 G A - ScafM INDEL 0020.scaffold00069 176507 8 ........ ACAAATTA scaffold18819 ScafM SNP 0020.scaffold00069 176600 2 GG AA scaffold18819 Both SNP 0020.scaffold00069 176620 1 G C scaffold18819 Both SNP 0020.scaffold00069 176679 1 T A scaffold18819 Both INDEL 0020.scaffold00069 176720 1 A . scaffold18819 ScafM SNP 0020.scaffold00069 176749 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 176755 2 GT AC scaffold18819 ScafM INDEL 0020.scaffold00069 176860 9 TACTGTTAA ......... scaffold18819 ScafM SNP 0020.scaffold00069 176910 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 176933 1 T G scaffold18819 ScafM INDEL 0020.scaffold00069 177043 1 . T scaffold18819 ScafM SNP 0020.scaffold00069 177047 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 177052 1 G A scaffold18819 ScafM INDEL 0020.scaffold00069 177057 8 CGCAACCA ........ scaffold18819 ScafM SNP 0020.scaffold00069 177072 1 A T scaffold18819 ScafM INDEL 0020.scaffold00069 177147 4 .... TGAA scaffold18819 ScafM INDEL 0020.scaffold00069 177152 1 . A scaffold18819 ScafM SNP 0020.scaffold00069 177156 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 177158 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 177191 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 177196 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 177202 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 177214 1 T G scaffold18819 ScafM INDEL 0020.scaffold00069 177224 1 A . scaffold18819 ScafM INDEL 0020.scaffold00069 177226 3 TTT ... scaffold18819 ScafM SNP 0020.scaffold00069 177247 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 177264 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 177310 1 T G scaffold18819 Both SNP 0020.scaffold00069 177341 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 177360 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 177386 1 G T scaffold18819 ScafM INDEL 0020.scaffold00069 177387 16 ................ ACATTAATCTATTCCA scaffold18819 ScafM INDEL 0020.scaffold00069 177393 18 .................. TAAATATATAATTCCTCC scaffold18819 ScafM INDEL 0020.scaffold00069 177397 2 .. CT scaffold18819 ScafM SNP 0020.scaffold00069 177398 1 G T scaffold18819 ScafM INDEL 0020.scaffold00069 177399 2 .A TT scaffold18819 ScafM SNP 0020.scaffold00069 177435 2 GA CG scaffold18819 ScafM SNP 0020.scaffold00069 177489 2 TA AG scaffold18819 ScafM INDEL 0020.scaffold00069 177518 25 AACATTCGCTGGGGTGGTAAAGAGC ......................... scaffold18819 ScafM INDEL 0020.scaffold00069 177544 2 AA .. scaffold18819 ScafM INDEL 0020.scaffold00069 177548 1 A . scaffold18819 ScafM INDEL 0020.scaffold00069 177553 6 AAATCC ...... scaffold18819 ScafM INDEL 0020.scaffold00069 177562 1 G . scaffold18819 ScafM INDEL 0020.scaffold00069 177564 5 GGGCC ..... scaffold18819 ScafM INDEL 0020.scaffold00069 177570 2 CT .A scaffold18819 ScafM SNP 0020.scaffold00069 177577 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 177581 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 177584 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 177592 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 177601 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 177604 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 177628 1 G T scaffold18819 ScafM INDEL 0020.scaffold00069 177629 1 . T scaffold18819 ScafM SNP 0020.scaffold00069 177634 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 177643 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 177646 1 T G scaffold18819 ScafM INDEL 0020.scaffold00069 177649 1 . T scaffold18819 ScafM INDEL 0020.scaffold00069 177687 31 AAAGTGATGAAATGCGGATGCATATTGCATC ............................... scaffold18819 ScafM SNP 0020.scaffold00069 177763 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 177777 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 177790 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 177824 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 177827 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 177836 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 177840 3 GAC ATT scaffold18819 ScafM SNP 0020.scaffold00069 177850 1 C T scaffold18819 ScafM INDEL 0020.scaffold00069 177878 1 T . scaffold18819 ScafM INDEL 0020.scaffold00069 177917 1 . C scaffold18819 Both SNP 0020.scaffold00069 177927 2 GG TA scaffold18819 ScafM SNP 0020.scaffold00069 177944 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 177957 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 177972 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 177979 1 T A scaffold18819 ScafM INDEL 0020.scaffold00069 177982 2 .. TT scaffold18819 ReadM SNP 0020.scaffold00069 177984 1 T A - ScafM SNP 0020.scaffold00069 177985 1 G C scaffold18819 ScafM SNP 0020.scaffold00069 177988 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 178016 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178021 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 178131 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178151 1 C T scaffold18819 ScafM INDEL 0020.scaffold00069 178233 1 A . scaffold18819 ScafM SNP 0020.scaffold00069 178250 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178289 1 G T scaffold18819 ScafM SNP 0020.scaffold00069 178292 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 178297 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 178305 2 CA AG scaffold18819 ReadM SNP 0020.scaffold00069 178306 1 A G - ScafM SNP 0020.scaffold00069 178318 2 GC TT scaffold18819 ScafM SNP 0020.scaffold00069 178327 2 GC AT scaffold18819 ScafM INDEL 0020.scaffold00069 178340 3 CCT ... scaffold18819 ScafM INDEL 0020.scaffold00069 178344 4 GGAA .... scaffold18819 ScafM SNP 0020.scaffold00069 178354 2 GG TA scaffold18819 ScafM SNP 0020.scaffold00069 178394 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 178404 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178411 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178455 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 178467 2 AT GC scaffold18819 ReadM SNP 0020.scaffold00069 178485 1 G A - ScafM INDEL 0020.scaffold00069 178498 16 AGAAGGCCTTATTAAT ................ scaffold18819 ScafM INDEL 0020.scaffold00069 178571 1 . T scaffold18819 ScafM INDEL 0020.scaffold00069 178572 1 . T scaffold18819 ScafM SNP 0020.scaffold00069 178583 1 T A scaffold18819 ScafM INDEL 0020.scaffold00069 178591 2 .. AT scaffold18819 ReadM SNP 0020.scaffold00069 178614 1 G C - ScafM INDEL 0020.scaffold00069 178617 15 ............... CTCATTTATGAGCTA scaffold18819 ScafM SNP 0020.scaffold00069 178625 2 AA GC scaffold18819 ScafM SNP 0020.scaffold00069 178629 1 A T scaffold18819 ScafM SNP 0020.scaffold00069 178634 3 GGT AAG scaffold18819 ScafM SNP 0020.scaffold00069 178658 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 178660 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 178668 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178673 1 G A scaffold18819 ReadM SNP 0020.scaffold00069 178674 1 A G - ScafM SNP 0020.scaffold00069 178684 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 178696 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 178722 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 178725 1 T C scaffold18819 ScafM SNP 0020.scaffold00069 178727 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 178732 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 178736 2 TT CA scaffold18819 ScafM SNP 0020.scaffold00069 178756 1 C T scaffold18819 ScafM INDEL 0020.scaffold00069 178784 3 TTC ... scaffold18819 ScafM SNP 0020.scaffold00069 178794 1 A G scaffold18819 ReadM INDEL 0020.scaffold00069 178817 1 T . - ScafM INDEL 0020.scaffold00069 178820 2 .. AG scaffold18819 ScafM INDEL 0020.scaffold00069 178822 1 . C scaffold18819 ScafM INDEL 0020.scaffold00069 178846 6 ...... CTCATT scaffold18819 Both SNP 0020.scaffold00069 178854 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 178867 2 AA GT scaffold18819 ScafM SNP 0020.scaffold00069 178874 1 C A scaffold18819 ScafM INDEL 0020.scaffold00069 178886 1 . A scaffold18819 ReadM SNP 0020.scaffold00069 179017 1 T C - ReadM SNP 0020.scaffold00069 179280 1 C T - ReadM SNP 0020.scaffold00069 179512 1 T C - ReadM SNP 0020.scaffold00069 179517 1 G A - ReadM SNP 0020.scaffold00069 179674 1 C T - ReadM SNP 0020.scaffold00069 179761 1 T C - ReadM SNP 0020.scaffold00069 179767 1 G A - ReadM SNP 0020.scaffold00069 179807 1 C T - ReadM SNP 0020.scaffold00069 179879 1 C T - ReadM INDEL 0020.scaffold00069 179891 1 . C - ReadM SNP 0020.scaffold00069 179961 1 T C - ReadM SNP 0020.scaffold00069 179987 1 A G - ReadM SNP 0020.scaffold00069 180034 1 C T - ReadM SNP 0020.scaffold00069 180042 1 C T - ReadM SNP 0020.scaffold00069 180156 1 C T - ReadM SNP 0020.scaffold00069 180215 1 T C - ReadM SNP 0020.scaffold00069 180556 1 G A - ReadM SNP 0020.scaffold00069 180707 1 G A - ReadM SNP 0020.scaffold00069 180817 1 G A - ReadM SNP 0020.scaffold00069 180854 1 G A - ReadM SNP 0020.scaffold00069 181238 1 A T - ReadM SNP 0020.scaffold00069 181267 1 A C - ReadM SNP 0020.scaffold00069 181351 1 A C - ReadM SNP 0020.scaffold00069 181475 1 A G - ReadM SNP 0020.scaffold00069 181506 1 G T - Both SNP 0020.scaffold00069 181548 1 C G scaffold6823 Both SNP 0020.scaffold00069 181562 1 A G scaffold6823 Both SNP 0020.scaffold00069 181655 1 G A scaffold6823 Both SNP 0020.scaffold00069 181671 1 T C scaffold6823 ReadM SNP 0020.scaffold00069 181693 1 C T - ReadM SNP 0020.scaffold00069 181785 1 A G - ReadM SNP 0020.scaffold00069 181805 1 G A - ReadM SNP 0020.scaffold00069 181905 1 T C - ReadM SNP 0020.scaffold00069 181907 1 G A - ReadM SNP 0020.scaffold00069 182023 1 T C - ReadM SNP 0020.scaffold00069 182084 1 T A - ReadM SNP 0020.scaffold00069 182108 1 T C - ScafM SNP 0020.scaffold00069 183014 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 184043 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 184113 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 184212 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 184220 1 A . scaffold6823 ScafM SNP 0020.scaffold00069 184236 1 G C scaffold6823 ReadM SNP 0020.scaffold00069 184808 1 T A - ScafM SNP 0020.scaffold00069 185179 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 185193 1 C G scaffold6823 Both SNP 0020.scaffold00069 185202 1 A T scaffold6823 Both SNP 0020.scaffold00069 185276 1 T C scaffold6823 Both SNP 0020.scaffold00069 185291 1 A G scaffold6823 Both SNP 0020.scaffold00069 185325 1 G C scaffold6823 Both SNP 0020.scaffold00069 185340 1 C T scaffold6823 Both SNP 0020.scaffold00069 185365 1 G T scaffold6823 Both SNP 0020.scaffold00069 185478 1 G A scaffold6823 Both SNP 0020.scaffold00069 185544 1 G A scaffold6823 Both SNP 0020.scaffold00069 185640 1 C T scaffold6823 Both SNP 0020.scaffold00069 185670 1 A C scaffold6823 Both SNP 0020.scaffold00069 185833 1 A T scaffold6823 Both SNP 0020.scaffold00069 185910 1 G A scaffold6823 Both SNP 0020.scaffold00069 185938 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 185953 1 . G scaffold6823 ScafM SNP 0020.scaffold00069 185964 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 186011 1 . T scaffold6823 ScafM INDEL 0020.scaffold00069 186059 1 . A scaffold6823 ScafM SNP 0020.scaffold00069 186061 1 T A scaffold6823 Both INDEL 0020.scaffold00069 186116 1 A . scaffold6823 ScafM SNP 0020.scaffold00069 186118 1 A C scaffold6823 Both SNP 0020.scaffold00069 186140 1 C T scaffold6823 Both SNP 0020.scaffold00069 186233 1 A G scaffold6823 ReadM SNP 0020.scaffold00069 186299 1 T C - ReadM SNP 0020.scaffold00069 186334 1 T C - ReadM SNP 0020.scaffold00069 186377 2 AC GT - ReadM SNP 0020.scaffold00069 186485 1 A C - ReadM SNP 0020.scaffold00069 186585 1 G C - ReadM SNP 0020.scaffold00069 186680 1 G A - ReadM SNP 0020.scaffold00069 187073 1 G A - Both SNP 0020.scaffold00069 187445 1 C G scaffold6823 Both SNP 0020.scaffold00069 187781 1 G C scaffold6823 Both SNP 0020.scaffold00069 187799 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 187820 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 187823 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 187833 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 187841 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 187853 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 187862 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 187876 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 187901 1 C T scaffold6823 Both SNP 0020.scaffold00069 187926 1 T C scaffold6823 Both SNP 0020.scaffold00069 187994 1 G T scaffold6823 Both SNP 0020.scaffold00069 188042 1 A G scaffold6823 Both SNP 0020.scaffold00069 188237 1 G A scaffold6823 Both SNP 0020.scaffold00069 188280 1 T C scaffold6823 Both SNP 0020.scaffold00069 188288 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 188321 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 188322 3 ... TTC scaffold6823 ScafM SNP 0020.scaffold00069 188324 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 188325 2 .G CT scaffold6823 ScafM INDEL 0020.scaffold00069 188338 1 T . scaffold6823 ScafM SNP 0020.scaffold00069 188341 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 188367 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 188406 2 AA TC scaffold6823 Both SNP 0020.scaffold00069 188462 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 188514 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 188533 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 188538 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 188552 2 AT .. scaffold6823 ScafM INDEL 0020.scaffold00069 188608 3 ... TGA scaffold6823 ScafM INDEL 0020.scaffold00069 188610 12 ............ TAGATGTGGATG scaffold6823 ScafM INDEL 0020.scaffold00069 188684 1 A . scaffold6823 ScafM SNP 0020.scaffold00069 188686 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 188693 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 188740 5 TTAAT GAGGA scaffold6823 ScafM SNP 0020.scaffold00069 188771 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 188780 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 192746 1 T G scaffold24551 ScafM SNP 0020.scaffold00069 192795 1 A T scaffold24551 ScafM SNP 0020.scaffold00069 192824 1 C T scaffold24551 ScafM SNP 0020.scaffold00069 192829 1 A G scaffold24551 ScafM INDEL 0020.scaffold00069 192844 2 .. AC scaffold24551 ScafM SNP 0020.scaffold00069 192860 1 A C scaffold24551 ScafM INDEL 0020.scaffold00069 192863 1 G . scaffold24551 ScafM INDEL 0020.scaffold00069 192867 5 CGGTA ..... scaffold24551 ScafM SNP 0020.scaffold00069 192879 1 A G scaffold24551 ScafM SNP 0020.scaffold00069 192882 1 C T scaffold24551 ScafM SNP 0020.scaffold00069 192891 1 T C scaffold24551 ScafM SNP 0020.scaffold00069 192935 1 C T scaffold24551 ScafM SNP 0020.scaffold00069 192940 1 T A scaffold24551 ScafM SNP 0020.scaffold00069 192978 1 A C scaffold24551 ScafM SNP 0020.scaffold00069 193004 1 T C scaffold24551 ScafM SNP 0020.scaffold00069 193019 1 A G scaffold24551 ScafM INDEL 0020.scaffold00069 193051 1 . T scaffold6823 ScafM SNP 0020.scaffold00069 193086 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 193109 1 G . scaffold6823 ScafM SNP 0020.scaffold00069 193122 1 C A scaffold6823 ScafM INDEL 0020.scaffold00069 193136 2 TT .. scaffold6823 ScafM SNP 0020.scaffold00069 193140 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 193160 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 194270 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 194287 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 194306 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 194308 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 194317 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 194321 1 G . scaffold6823 ScafM SNP 0020.scaffold00069 194334 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 194481 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 194487 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 194496 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 194510 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 194525 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 194544 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 194570 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 194611 2 GC AT scaffold6823 ScafM SNP 0020.scaffold00069 194621 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 194629 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 194661 2 CT TC scaffold6823 ScafM SNP 0020.scaffold00069 194674 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 194683 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 198564 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 198584 1 G T scaffold6823 ScafM INDEL 0020.scaffold00069 198598 2 .. TA scaffold6823 ScafM SNP 0020.scaffold00069 198645 1 G C scaffold6823 ScafM INDEL 0020.scaffold00069 198666 5 ..... CTCGC scaffold6823 ScafM INDEL 0020.scaffold00069 198667 3 ... GTC scaffold6823 ScafM SNP 0020.scaffold00069 198670 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 198705 3 ... AGA scaffold6823 ScafM INDEL 0020.scaffold00069 198706 8 ........ CAAAGACA scaffold6823 ScafM INDEL 0020.scaffold00069 198709 1 . T scaffold6823 ScafM INDEL 0020.scaffold00069 198710 3 ... AAA scaffold6823 ScafM SNP 0020.scaffold00069 198711 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 198790 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 198800 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 198820 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 198824 1 . C scaffold6823 ScafM INDEL 0020.scaffold00069 198825 3 ... AAG scaffold6823 ScafM SNP 0020.scaffold00069 198851 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 198869 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 198879 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 198892 2 AT CC scaffold6823 ScafM SNP 0020.scaffold00069 198951 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 198987 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 198996 2 GT AC scaffold6823 ScafM SNP 0020.scaffold00069 198999 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 199006 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 199015 1 C . scaffold6823 ScafM SNP 0020.scaffold00069 199031 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 199045 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 199056 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 199104 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 199114 2 TT CC scaffold6823 ScafM SNP 0020.scaffold00069 199120 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 199131 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 200549 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 200565 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 201245 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 201250 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 201254 2 TA .. scaffold6823 ScafM INDEL 0020.scaffold00069 201266 2 TG .C scaffold6823 ScafM SNP 0020.scaffold00069 201272 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 201275 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 201294 1 T A scaffold6823 ScafM INDEL 0020.scaffold00069 201315 6 ...... AATAGG scaffold6823 ScafM SNP 0020.scaffold00069 201323 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 201328 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 201330 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 201333 3 CTA TGG scaffold6823 ScafM INDEL 0020.scaffold00069 201356 1 C . scaffold6823 ScafM SNP 0020.scaffold00069 201365 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 201368 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 201374 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 201378 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 202152 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 202170 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 202172 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 202197 2 TA AT scaffold6823 ScafM INDEL 0020.scaffold00069 202207 8 CTCCAACT ........ scaffold6823 ScafM SNP 0020.scaffold00069 202235 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 202242 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 202281 1 A C scaffold6823 ScafM INDEL 0020.scaffold00069 202286 1 . T scaffold6823 ScafM SNP 0020.scaffold00069 202295 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 202326 12 ............ AACGCATAAGAT scaffold6823 ScafM SNP 0020.scaffold00069 202351 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 202402 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202414 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 202441 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202494 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 202499 2 GC TT scaffold6823 ScafM SNP 0020.scaffold00069 202505 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202512 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 202516 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 202543 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202588 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 202591 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 202609 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 202623 1 A . scaffold6823 ScafM SNP 0020.scaffold00069 202629 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202639 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202643 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202876 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202880 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202885 1 C A scaffold6823 ScafM INDEL 0020.scaffold00069 202906 15 ............... GCAGTAGGGTATACC scaffold6823 ScafM SNP 0020.scaffold00069 202939 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 202941 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 202965 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 202969 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202973 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 202982 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 202985 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 202995 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 203001 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 203004 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 203078 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203094 2 CC AT scaffold6823 ScafM SNP 0020.scaffold00069 203111 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 203113 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203128 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 203131 2 TC GT scaffold6823 ScafM SNP 0020.scaffold00069 203154 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 203159 2 CT TC scaffold6823 ScafM SNP 0020.scaffold00069 203167 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 203171 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203173 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 203175 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 203180 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 203186 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203223 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 203228 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 203233 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203249 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 203256 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 203262 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 203265 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 203273 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203285 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 203287 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203298 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 203316 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 204268 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 204286 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 204307 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 204332 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 204334 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 204340 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 204348 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 204363 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 204372 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 204378 1 A C scaffold6823 ScafM INDEL 0020.scaffold00069 204401 1 . G scaffold6823 ScafM SNP 0020.scaffold00069 204426 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 204429 1 G A scaffold6823 ScafM INDEL 0020.scaffold00069 204438 1 . A scaffold6823 ScafM SNP 0020.scaffold00069 204442 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 204568 1 T C scaffold9871 ScafM INDEL 0020.scaffold00069 204581 1 . A scaffold9871 ScafM SNP 0020.scaffold00069 204587 1 C A scaffold9871 ScafM SNP 0020.scaffold00069 204601 1 T A scaffold9871 ScafM SNP 0020.scaffold00069 204612 1 G A scaffold9871 ScafM SNP 0020.scaffold00069 204614 1 T G scaffold9871 ScafM SNP 0020.scaffold00069 204616 1 T G scaffold9871 ScafM INDEL 0020.scaffold00069 204621 4 TATA .... scaffold9871 ScafM SNP 0020.scaffold00069 204644 1 T C scaffold9871 ScafM SNP 0020.scaffold00069 204649 1 T G scaffold9871 ScafM INDEL 0020.scaffold00069 204659 12 ............ CCTCTAGCAACT scaffold9871 ScafM INDEL 0020.scaffold00069 204660 1 . G scaffold9871 ScafM INDEL 0020.scaffold00069 204667 4 .... TTTA scaffold9871 ScafM INDEL 0020.scaffold00069 204668 4 .... TCTT scaffold9871 ScafM SNP 0020.scaffold00069 204675 1 T C scaffold9871 ScafM SNP 0020.scaffold00069 204682 1 T C scaffold9871 ScafM SNP 0020.scaffold00069 204727 1 A G scaffold9871 ScafM SNP 0020.scaffold00069 204730 2 GT TG scaffold9871 ScafM SNP 0020.scaffold00069 204742 1 T G scaffold9871 ScafM SNP 0020.scaffold00069 204753 1 G T scaffold9871 ScafM INDEL 0020.scaffold00069 204758 2 GG .. scaffold9871 ScafM SNP 0020.scaffold00069 204761 1 T A scaffold9871 ScafM SNP 0020.scaffold00069 204763 1 T A scaffold9871 ScafM INDEL 0020.scaffold00069 204772 1 A . scaffold9871 ScafM SNP 0020.scaffold00069 204798 1 C T scaffold9871 ScafM SNP 0020.scaffold00069 205828 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 205834 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 205842 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 205845 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 205847 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 205859 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 205863 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 205865 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 205870 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 208575 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 208580 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 208588 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 208590 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 208602 3 ATG ... scaffold6823 ScafM SNP 0020.scaffold00069 208614 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 208635 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 208637 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 208642 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 208644 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208666 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 208681 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 208683 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 208686 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 208713 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 208715 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208719 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 208730 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 208735 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 208737 2 AG GA scaffold6823 ScafM SNP 0020.scaffold00069 208764 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 208768 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208774 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 208782 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 208788 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208805 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 208823 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 208826 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 208844 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 208846 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 208851 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 208855 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208871 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 208879 2 TG CA scaffold6823 ScafM SNP 0020.scaffold00069 208883 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 208886 1 C A scaffold6823 ScafM INDEL 0020.scaffold00069 208894 4 AATT .... scaffold6823 ScafM SNP 0020.scaffold00069 208907 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208923 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 208936 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 208938 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 208941 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 208959 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 208970 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 209047 1 A G scaffold1150 ScafM SNP 0020.scaffold00069 209068 1 G A scaffold1150 ScafM SNP 0020.scaffold00069 209072 1 T A scaffold1150 ScafM SNP 0020.scaffold00069 209080 2 AA GG scaffold1150 ScafM INDEL 0020.scaffold00069 211396 2 .. TA scaffold270 ScafM SNP 0020.scaffold00069 211399 1 T C scaffold270 ScafM SNP 0020.scaffold00069 211404 1 A T scaffold270 ScafM SNP 0020.scaffold00069 211410 1 T A scaffold270 ScafM SNP 0020.scaffold00069 211438 1 T A scaffold270 ScafM SNP 0020.scaffold00069 211442 1 T A scaffold270 ScafM SNP 0020.scaffold00069 211499 1 A G scaffold270 ScafM SNP 0020.scaffold00069 211640 1 A G scaffold270 ScafM INDEL 0020.scaffold00069 211657 1 G . scaffold270 ScafM SNP 0020.scaffold00069 211673 1 A C scaffold270 ScafM SNP 0020.scaffold00069 211712 1 T C scaffold270 ScafM SNP 0020.scaffold00069 211719 1 A C scaffold270 ScafM SNP 0020.scaffold00069 211761 1 A G scaffold270 ScafM INDEL 0020.scaffold00069 211831 1 A . scaffold270 ScafM SNP 0020.scaffold00069 211842 1 G A scaffold270 ScafM SNP 0020.scaffold00069 211846 1 C G scaffold270 ScafM SNP 0020.scaffold00069 211848 1 A G scaffold270 ScafM SNP 0020.scaffold00069 211912 1 A G scaffold270 ScafM SNP 0020.scaffold00069 211924 1 G T scaffold270 ScafM SNP 0020.scaffold00069 211952 1 A G scaffold270 ScafM SNP 0020.scaffold00069 211970 1 A G scaffold270 ScafM SNP 0020.scaffold00069 212016 1 A G scaffold270 ScafM SNP 0020.scaffold00069 212049 1 A G scaffold270 ScafM SNP 0020.scaffold00069 212407 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 212424 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212433 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 212437 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 212445 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212454 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 212457 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 212473 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 212475 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212503 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 212506 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 212510 3 TTT ... scaffold6823 ScafM INDEL 0020.scaffold00069 212515 4 GGAC .... scaffold6823 ScafM SNP 0020.scaffold00069 212533 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212541 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 212552 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 212554 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 212562 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212598 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 212601 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212614 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 212621 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 212645 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 212680 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212719 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212722 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212741 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 212757 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 212779 4 .... AAAT scaffold6823 ScafM INDEL 0020.scaffold00069 212787 1 . T scaffold6823 ScafM INDEL 0020.scaffold00069 212791 2 .. AA scaffold6823 ScafM SNP 0020.scaffold00069 212798 1 G A scaffold6823 ScafM INDEL 0020.scaffold00069 212821 3 ... TTC scaffold6823 ScafM INDEL 0020.scaffold00069 212823 17 ................. AAACAATAGGAATTAAC scaffold6823 ScafM INDEL 0020.scaffold00069 212824 1 . A scaffold6823 ScafM INDEL 0020.scaffold00069 212825 2 .. CC scaffold6823 ScafM SNP 0020.scaffold00069 212831 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 212848 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 212853 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212856 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212867 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 212871 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 212879 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 212898 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 212901 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 213325 2 AA CT scaffold6823 ScafM SNP 0020.scaffold00069 213362 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 213365 4 .... GAGT scaffold6823 ScafM SNP 0020.scaffold00069 213369 2 CA AG scaffold6823 ScafM INDEL 0020.scaffold00069 213390 1 T . scaffold6823 ScafM SNP 0020.scaffold00069 213392 1 T G scaffold6823 ScafM INDEL 0020.scaffold00069 213395 3 CAA ... scaffold6823 ScafM SNP 0020.scaffold00069 213408 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 213411 4 .... TTTA scaffold6823 ScafM SNP 0020.scaffold00069 213412 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 213426 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 213429 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 213451 1 . A scaffold6823 ScafM SNP 0020.scaffold00069 213464 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 213475 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 213748 2 CT TG scaffold6823 ScafM SNP 0020.scaffold00069 213773 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 213822 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 213824 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 213843 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 213866 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 213912 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 213916 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 213922 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 213940 1 T A scaffold6823 ScafM INDEL 0020.scaffold00069 213997 2 .. TC scaffold6823 ScafM SNP 0020.scaffold00069 214028 1 T G scaffold6823 ScafM SNP 0020.scaffold00069 214656 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 214680 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 214718 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 214722 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 214821 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 214841 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 214847 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 214961 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 224847 1 G A scaffold6823 ScafM INDEL 0020.scaffold00069 224856 2 .. AG scaffold6823 ScafM SNP 0020.scaffold00069 224860 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 224873 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 224877 1 C A scaffold6823 ScafM SNP 0020.scaffold00069 224907 2 AA TT scaffold6823 ScafM SNP 0020.scaffold00069 224916 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 224979 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 225018 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 225047 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 225062 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 225067 1 T C scaffold6823 ScafM INDEL 0020.scaffold00069 225254 2 .. AA scaffold6823 ScafM SNP 0020.scaffold00069 225290 1 C T scaffold6823 ScafM INDEL 0020.scaffold00069 225293 4 .... GTAA scaffold6823 ScafM SNP 0020.scaffold00069 225294 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 225331 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 225345 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 225357 1 T A scaffold6823 ReadM SNP 0020.scaffold00069 226418 1 C T - ReadM SNP 0020.scaffold00069 226427 1 G T - ReadM SNP 0020.scaffold00069 226437 1 A G - ScafM INDEL 0020.scaffold00069 226606 1 . T scaffold6823 ScafM SNP 0020.scaffold00069 226608 2 AC GT scaffold6823 ScafM SNP 0020.scaffold00069 226617 2 TG AT scaffold6823 ScafM SNP 0020.scaffold00069 226636 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 226639 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 226669 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 226673 1 C G scaffold6823 ScafM INDEL 0020.scaffold00069 226696 1 . T scaffold6823 ReadM SNP 0020.scaffold00069 226784 1 C G - ReadM SNP 0020.scaffold00069 226837 1 A G - ScafM SNP 0020.scaffold00069 230000 2 CA TG scaffold6823 ScafM SNP 0020.scaffold00069 230005 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 230009 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 230015 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 230021 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 230033 3 TCG CTA scaffold6823 ScafM SNP 0020.scaffold00069 230061 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 230074 1 T G scaffold6823 ScafM INDEL 0020.scaffold00069 230076 1 A . scaffold6823 ScafM SNP 0020.scaffold00069 230117 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 230123 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 230168 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 230185 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 230201 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 230258 1 C . scaffold6823 ScafM SNP 0020.scaffold00069 230292 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 230300 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 230317 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 230340 1 G A scaffold6823 ScafM INDEL 0020.scaffold00069 230357 4 .... GATC scaffold6823 ScafM SNP 0020.scaffold00069 230365 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 230367 1 G T scaffold6823 ScafM SNP 0020.scaffold00069 230374 2 GC TA scaffold6823 ScafM SNP 0020.scaffold00069 230388 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 230393 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 230397 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 230405 2 CT .. scaffold6823 ScafM SNP 0020.scaffold00069 230424 1 G C scaffold6823 ScafM SNP 0020.scaffold00069 230426 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 230433 1 T A scaffold6823 ScafM INDEL 0020.scaffold00069 230449 4 TGTT .... scaffold6823 ScafM INDEL 0020.scaffold00069 230455 4 AAAG .... scaffold6823 ScafM INDEL 0020.scaffold00069 230461 1 C . scaffold6823 ScafM SNP 0020.scaffold00069 230470 1 T A scaffold6823 ScafM SNP 0020.scaffold00069 230484 1 A C scaffold6823 ScafM SNP 0020.scaffold00069 230553 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 230569 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 230576 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 230582 1 T G scaffold6823 Both SNP 0020.scaffold00069 230663 1 G T scaffold6823 Both SNP 0020.scaffold00069 230799 1 T C scaffold6823 Both SNP 0020.scaffold00069 231026 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 231081 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 231090 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 231093 1 C T scaffold6823 ScafM SNP 0020.scaffold00069 231114 1 A T scaffold6823 ScafM SNP 0020.scaffold00069 231131 1 A G scaffold6823 ScafM SNP 0020.scaffold00069 231149 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 231152 1 T C scaffold6823 ScafM SNP 0020.scaffold00069 231160 1 C G scaffold6823 ScafM SNP 0020.scaffold00069 231164 1 G A scaffold6823 ScafM SNP 0020.scaffold00069 231176 1 T C scaffold6823 Both SNP 0020.scaffold00069 231211 1 C T scaffold6823 Both SNP 0020.scaffold00069 231276 1 G A scaffold6823 Both SNP 0020.scaffold00069 231285 1 A G scaffold6823 ScafM INDEL 0020.scaffold00069 239161 10 ATTAAGTTAT .......... scaffold6823 ScafM INDEL 0020.scaffold00069 252104 4 TCCA .... scaffold6823 ScafM SNP 0020.scaffold00069 252110 2 CC TT scaffold6823 ScafM SNP 0020.scaffold00069 252114 4 GCAC TTTT scaffold6823 ScafM SNP 0020.scaffold00069 252120 2 AC TT scaffold6823 ScafM SNP 0020.scaffold00069 252123 1 A T scaffold6823 ScafM INDEL 0020.scaffold00069 252128 2 AC .. scaffold6823 ScafM SNP 0020.scaffold00069 277525 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 277789 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 277809 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 277816 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 277957 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 278004 1 C G scaffold18819 ScafM SNP 0020.scaffold00069 278076 2 GG AA scaffold18819 ScafM SNP 0020.scaffold00069 278079 1 T G scaffold18819 ScafM INDEL 0020.scaffold00069 278091 6 AGGAAC ...... scaffold18819 ScafM INDEL 0020.scaffold00069 278100 2 CC .. scaffold18819 ScafM INDEL 0020.scaffold00069 278121 2 .T CA scaffold18819 ScafM SNP 0020.scaffold00069 278133 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 278143 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 278181 1 C A scaffold18819 ScafM SNP 0020.scaffold00069 278243 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 278253 1 C T scaffold18819 ScafM INDEL 0020.scaffold00069 278256 2 .. CA scaffold18819 ScafM SNP 0020.scaffold00069 278266 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 278270 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 278326 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 278340 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 278348 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 278369 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 278374 1 T C scaffold18819 ScafM INDEL 0020.scaffold00069 278395 1 . T scaffold18819 ScafM SNP 0020.scaffold00069 278406 1 T A scaffold18819 ScafM INDEL 0020.scaffold00069 278669 1 T . scaffold18819 ScafM SNP 0020.scaffold00069 278687 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 278690 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 278692 2 AG CT scaffold18819 ScafM SNP 0020.scaffold00069 278709 2 TA AT scaffold18819 ScafM INDEL 0020.scaffold00069 278756 20 .................... AGTAACATATAAAATAATAT scaffold18819 ScafM SNP 0020.scaffold00069 278817 1 A G scaffold18819 ScafM SNP 0020.scaffold00069 278820 1 G C scaffold18819 ScafM SNP 0020.scaffold00069 278906 1 T C scaffold18819 ScafM INDEL 0020.scaffold00069 278909 15 ............... TTTTCCTGTTTCTGC scaffold18819 ScafM SNP 0020.scaffold00069 279040 1 A C scaffold18819 ScafM SNP 0020.scaffold00069 279620 1 T G scaffold18819 ScafM SNP 0020.scaffold00069 280182 1 T A scaffold18819 ScafM SNP 0020.scaffold00069 280404 1 C T scaffold18819 ScafM SNP 0020.scaffold00069 280516 1 G A scaffold18819 ScafM SNP 0020.scaffold00069 280532 1 G T scaffold18819 ScafM INDEL 0020.scaffold00069 280610 4 AAAA .... scaffold18819 ScafM SNP 0020.scaffold00069 280631 1 G A scaffold18819 ScafM INDEL 0020.scaffold00069 281814 2 AT .. scaffold5321 ScafM SNP 0020.scaffold00069 281829 1 G T scaffold5321 ScafM SNP 0020.scaffold00069 281832 1 G T scaffold5321 ScafM SNP 0020.scaffold00069 281880 1 T G scaffold5321 ScafM SNP 0020.scaffold00069 281884 1 A T scaffold5321 ScafM INDEL 0020.scaffold00069 284874 2 TC .. scaffold5321 ScafM INDEL 0020.scaffold00069 284880 10 GGTAATCGTA .......... scaffold5321 Both SNP 0020.scaffold00069 311449 1 T A scaffold9517 Both SNP 0020.scaffold00069 311475 1 A G scaffold9517 Both SNP 0020.scaffold00069 311768 1 C A scaffold9517 Both SNP 0020.scaffold00069 311859 1 T C scaffold9517 Both SNP 0020.scaffold00069 311931 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 311955 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 311965 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 311971 1 A T scaffold9517 ScafM SNP 0020.scaffold00069 311985 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 311989 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 312001 1 A C scaffold9517 ScafM SNP 0020.scaffold00069 312020 1 C T scaffold9517 Both SNP 0020.scaffold00069 312052 1 C T scaffold9517 Both SNP 0020.scaffold00069 312062 1 G T scaffold9517 Both SNP 0020.scaffold00069 312077 1 C G scaffold9517 Both SNP 0020.scaffold00069 312172 1 G C scaffold9517 Both SNP 0020.scaffold00069 312212 1 T C scaffold9517 Both SNP 0020.scaffold00069 312218 1 C T scaffold9517 Both SNP 0020.scaffold00069 312283 1 A G scaffold9517 Both SNP 0020.scaffold00069 312297 1 A G scaffold9517 Both SNP 0020.scaffold00069 312326 1 A G scaffold9517 Both SNP 0020.scaffold00069 312565 1 C A scaffold9517 Both INDEL 0020.scaffold00069 313106 1 . A scaffold9517 Both SNP 0020.scaffold00069 313806 1 C T scaffold9517 Both SNP 0020.scaffold00069 314024 1 G A scaffold9517 Both SNP 0020.scaffold00069 314598 1 G A scaffold9517 Both SNP 0020.scaffold00069 314858 1 C T scaffold9517 Both INDEL 0020.scaffold00069 314950 1 G . scaffold9517 Both SNP 0020.scaffold00069 315059 1 A G scaffold9517 Both INDEL 0020.scaffold00069 315085 1 . T scaffold9517 Both SNP 0020.scaffold00069 315327 1 A T scaffold9517 Both SNP 0020.scaffold00069 315344 1 T C scaffold9517 Both SNP 0020.scaffold00069 315362 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 315422 2 AA GT scaffold9517 Both SNP 0020.scaffold00069 315449 1 T G scaffold9517 ScafM SNP 0020.scaffold00069 315523 2 TG CA scaffold9517 ScafM SNP 0020.scaffold00069 315537 1 T A scaffold9517 ScafM SNP 0020.scaffold00069 315547 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 315567 1 T C scaffold9517 Both SNP 0020.scaffold00069 315589 1 C A scaffold9517 Both SNP 0020.scaffold00069 315631 1 A G scaffold9517 Both SNP 0020.scaffold00069 315669 1 C T scaffold9517 Both SNP 0020.scaffold00069 315759 1 G C scaffold9517 Both SNP 0020.scaffold00069 315792 1 C A scaffold9517 Both INDEL 0020.scaffold00069 315800 1 T . scaffold9517 Both SNP 0020.scaffold00069 315832 1 T A scaffold9517 Both SNP 0020.scaffold00069 315894 1 G T scaffold9517 Both SNP 0020.scaffold00069 316023 1 C A scaffold9517 ScafM SNP 0020.scaffold00069 316188 1 G A scaffold9517 ScafM INDEL 0020.scaffold00069 316191 1 A . scaffold9517 ScafM INDEL 0020.scaffold00069 316203 1 A . scaffold9517 ScafM SNP 0020.scaffold00069 316239 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 316244 2 TA CG scaffold9517 Both SNP 0020.scaffold00069 316267 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 316297 1 A G scaffold9517 Both SNP 0020.scaffold00069 316344 1 G A scaffold9517 Both SNP 0020.scaffold00069 316616 1 A C scaffold9517 Both SNP 0020.scaffold00069 316627 1 G T scaffold9517 ScafM SNP 0020.scaffold00069 316635 1 A G scaffold9517 ReadM INDEL 0020.scaffold00069 316743 1 . T - Both SNP 0020.scaffold00069 316771 1 T A scaffold9517 ReadM SNP 0020.scaffold00069 316836 1 T C - ReadM SNP 0020.scaffold00069 317575 1 A G - ReadM SNP 0020.scaffold00069 317666 1 C A - ReadM SNP 0020.scaffold00069 320113 1 C A - ReadM SNP 0020.scaffold00069 320156 1 A T - ReadM SNP 0020.scaffold00069 320266 1 G T - ReadM SNP 0020.scaffold00069 320320 1 T C - ReadM SNP 0020.scaffold00069 320388 1 A C - ReadM SNP 0020.scaffold00069 320484 1 G C - ReadM SNP 0020.scaffold00069 320552 1 T C - ReadM SNP 0020.scaffold00069 320997 1 T C - ReadM SNP 0020.scaffold00069 321060 1 C G - ScafM SNP 0020.scaffold00069 321132 2 GT TG scaffold9517 ReadM SNP 0020.scaffold00069 321209 1 A G - ReadM SNP 0020.scaffold00069 321281 1 C T - ScafM INDEL 0020.scaffold00069 321339 1 . A scaffold9517 Both INDEL 0020.scaffold00069 321415 1 . A scaffold9517 ScafM INDEL 0020.scaffold00069 321448 1 A . scaffold9517 ReadM SNP 0020.scaffold00069 322051 1 T C - ReadM SNP 0020.scaffold00069 322054 1 T C - ReadM SNP 0020.scaffold00069 322148 1 C A - Both SNP 0020.scaffold00069 322334 1 G A scaffold9517 ReadM SNP 0020.scaffold00069 322688 1 A G - ReadM SNP 0020.scaffold00069 322715 1 C A - ScafM INDEL 0020.scaffold00069 323550 1 A . scaffold9517 ScafM SNP 0020.scaffold00069 323572 1 A G scaffold9517 ScafM INDEL 0020.scaffold00069 323573 3 ... GGG scaffold9517 ScafM INDEL 0020.scaffold00069 323673 4 TGCA .... scaffold9517 ScafM INDEL 0020.scaffold00069 323683 1 C . scaffold9517 ScafM SNP 0020.scaffold00069 323685 1 G T scaffold9517 ScafM SNP 0020.scaffold00069 323741 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 323793 2 TC CT scaffold9517 ScafM INDEL 0020.scaffold00069 323883 3 TTC ... scaffold9517 Both SNP 0020.scaffold00069 323947 1 C T scaffold9517 ScafM INDEL 0020.scaffold00069 324003 1 . A scaffold9517 ScafM INDEL 0020.scaffold00069 324086 31 AGGTTATATTGATTAAAAATATTGACTTAGC ............................... scaffold9517 ScafM INDEL 0020.scaffold00069 324119 1 A . scaffold9517 ReadM SNP 0020.scaffold00069 324443 1 G A - ReadM SNP 0020.scaffold00069 324581 1 T C - ReadM SNP 0020.scaffold00069 324670 1 T A - ScafM SNP 0020.scaffold00069 324871 1 T G scaffold9517 ScafM SNP 0020.scaffold00069 324937 1 C T scaffold9517 ScafM INDEL 0020.scaffold00069 325313 6 AATTTT ...... scaffold9517 ScafM SNP 0020.scaffold00069 325320 1 T C scaffold9517 ScafM SNP 0020.scaffold00069 325335 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 325356 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 325366 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 325394 1 A T scaffold9517 ScafM SNP 0020.scaffold00069 325405 1 G T scaffold9517 ScafM SNP 0020.scaffold00069 325491 1 T G scaffold9517 ScafM SNP 0020.scaffold00069 325530 1 T C scaffold9517 ScafM INDEL 0020.scaffold00069 325636 1 . T scaffold9517 ScafM SNP 0020.scaffold00069 325652 1 C A scaffold9517 ScafM SNP 0020.scaffold00069 325742 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 325807 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 325850 1 T A scaffold9517 Both SNP 0020.scaffold00069 326162 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 326300 1 T A scaffold9517 Both SNP 0020.scaffold00069 326547 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 326640 1 A T scaffold9517 Both SNP 0020.scaffold00069 326904 1 T C scaffold9517 ScafM SNP 0020.scaffold00069 326924 1 A T scaffold9517 ScafM SNP 0020.scaffold00069 326932 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 326940 1 G T scaffold9517 ReadM SNP 0020.scaffold00069 327172 1 T C - ReadM SNP 0020.scaffold00069 327190 1 A G - ReadM SNP 0020.scaffold00069 327374 1 G A - ReadM SNP 0020.scaffold00069 327396 1 C T - ReadM SNP 0020.scaffold00069 327669 1 A G - ReadM SNP 0020.scaffold00069 327681 1 C T - ScafM SNP 0020.scaffold00069 327887 1 C A scaffold9517 ScafM SNP 0020.scaffold00069 327895 1 G T scaffold9517 ScafM SNP 0020.scaffold00069 327901 1 T C scaffold9517 ScafM SNP 0020.scaffold00069 327903 1 T C scaffold9517 ScafM INDEL 0020.scaffold00069 327907 5 ATTTG ..... scaffold9517 ScafM SNP 0020.scaffold00069 327957 1 C G scaffold9517 Both INDEL 0020.scaffold00069 328677 3 ACA ... scaffold9517 Both SNP 0020.scaffold00069 329032 1 G A scaffold9517 Both SNP 0020.scaffold00069 329046 1 A C scaffold9517 Both SNP 0020.scaffold00069 329235 1 G A scaffold9517 Both SNP 0020.scaffold00069 329257 1 T G scaffold9517 Both SNP 0020.scaffold00069 329432 1 T C scaffold9517 Both SNP 0020.scaffold00069 329454 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 329489 2 AG CC scaffold9517 ScafM SNP 0020.scaffold00069 329511 1 G A scaffold9517 ScafM INDEL 0020.scaffold00069 329537 3 ATA ... scaffold9517 ScafM SNP 0020.scaffold00069 329541 1 C G scaffold9517 ScafM SNP 0020.scaffold00069 329564 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 329576 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 329608 2 GT AA scaffold9517 Both SNP 0020.scaffold00069 329617 1 T C scaffold9517 Both SNP 0020.scaffold00069 329719 1 G C scaffold9517 Both SNP 0020.scaffold00069 329724 1 C T scaffold9517 ReadM SNP 0020.scaffold00069 329900 1 C G - ReadM SNP 0020.scaffold00069 329908 1 C T - ReadM SNP 0020.scaffold00069 329943 1 T A - ReadM SNP 0020.scaffold00069 329980 1 G A - ReadM SNP 0020.scaffold00069 330001 1 C T - ReadM SNP 0020.scaffold00069 330039 1 T A - ReadM SNP 0020.scaffold00069 330100 1 T C - ReadM SNP 0020.scaffold00069 330148 1 G C - ReadM SNP 0020.scaffold00069 330195 1 A G - ReadM SNP 0020.scaffold00069 330222 1 G A - ReadM SNP 0020.scaffold00069 330254 1 A G - ReadM SNP 0020.scaffold00069 330301 1 G A - ReadM SNP 0020.scaffold00069 330310 1 T A - ReadM SNP 0020.scaffold00069 330316 1 A G - Both SNP 0020.scaffold00069 330380 1 G C scaffold9517 Both SNP 0020.scaffold00069 330386 1 C T scaffold9517 Both SNP 0020.scaffold00069 330408 1 T C scaffold9517 Both SNP 0020.scaffold00069 330435 1 G A scaffold9517 ScafM INDEL 0020.scaffold00069 330542 3 GAA ... scaffold9517 Both SNP 0020.scaffold00069 330589 1 G A scaffold9517 Both SNP 0020.scaffold00069 330661 1 T G scaffold9517 Both SNP 0020.scaffold00069 330720 1 T C scaffold9517 Both SNP 0020.scaffold00069 330806 1 T C scaffold9517 Both SNP 0020.scaffold00069 330819 1 C G scaffold9517 ScafM INDEL 0020.scaffold00069 330866 1 . T scaffold9517 Both SNP 0020.scaffold00069 330869 1 C T scaffold9517 ScafM SNP 0020.scaffold00069 330961 2 TA AG scaffold9517 Both SNP 0020.scaffold00069 331002 1 A G scaffold9517 Both SNP 0020.scaffold00069 331088 1 G A scaffold9517 Both SNP 0020.scaffold00069 331128 1 C A scaffold9517 Both SNP 0020.scaffold00069 331173 1 A C scaffold9517 Both SNP 0020.scaffold00069 331212 1 T A scaffold9517 Both SNP 0020.scaffold00069 331227 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 331248 1 T A scaffold9517 ScafM SNP 0020.scaffold00069 331256 1 T C scaffold9517 Both SNP 0020.scaffold00069 331261 1 G A scaffold9517 Both SNP 0020.scaffold00069 331395 1 T G scaffold9517 ReadM SNP 0020.scaffold00069 331505 1 A T - ReadM SNP 0020.scaffold00069 331567 1 C T - ScafM INDEL 0020.scaffold00069 331643 1 . A scaffold9517 ScafM INDEL 0020.scaffold00069 331647 3 ... GTT scaffold9517 Both SNP 0020.scaffold00069 331665 1 T C scaffold9517 Both SNP 0020.scaffold00069 331719 1 T G scaffold9517 Both SNP 0020.scaffold00069 331726 1 C T scaffold9517 Both SNP 0020.scaffold00069 331801 1 G A scaffold9517 Both SNP 0020.scaffold00069 331817 1 G T scaffold9517 Both SNP 0020.scaffold00069 331832 1 T C scaffold9517 Both SNP 0020.scaffold00069 331952 1 A G scaffold9517 Both SNP 0020.scaffold00069 331998 1 A G scaffold9517 Both SNP 0020.scaffold00069 332008 1 A G scaffold9517 ReadM SNP 0020.scaffold00069 332120 1 A G - ReadM SNP 0020.scaffold00069 332243 1 G A - ReadM SNP 0020.scaffold00069 332271 1 A C - ReadM SNP 0020.scaffold00069 332348 1 C G - ReadM SNP 0020.scaffold00069 332376 1 C T - ReadM SNP 0020.scaffold00069 332430 1 T C - ReadM SNP 0020.scaffold00069 332463 1 G T - ReadM SNP 0020.scaffold00069 332480 1 A G - ReadM SNP 0020.scaffold00069 332627 1 G A - ReadM SNP 0020.scaffold00069 332640 1 G C - ReadM SNP 0020.scaffold00069 332928 1 T C - ReadM SNP 0020.scaffold00069 333087 1 A C - ReadM SNP 0020.scaffold00069 333135 1 G T - ReadM SNP 0020.scaffold00069 333746 1 A C - ReadM SNP 0020.scaffold00069 334285 1 C A - ReadM SNP 0020.scaffold00069 334294 1 T C - ReadM SNP 0020.scaffold00069 334964 1 A G - ReadM SNP 0020.scaffold00069 335149 1 C G - ReadM SNP 0020.scaffold00069 335584 1 T G - ReadM SNP 0020.scaffold00069 335603 1 G T - ReadM INDEL 0020.scaffold00069 335675 2 AA .. - ReadM SNP 0020.scaffold00069 335788 1 G A - Both SNP 0020.scaffold00069 336354 1 T C scaffold9517 Both SNP 0020.scaffold00069 336867 1 C G scaffold9517 Both SNP 0020.scaffold00069 337100 1 T C scaffold9517 ScafM SNP 0020.scaffold00069 337382 1 G A scaffold9517 ScafM SNP 0020.scaffold00069 337386 1 C T scaffold9517 ReadM SNP 0020.scaffold00069 337470 1 T C - ScafM SNP 0020.scaffold00069 338001 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 338025 1 A G scaffold9517 ScafM INDEL 0020.scaffold00069 338202 2 .. TT scaffold9517 ScafM INDEL 0020.scaffold00069 338249 1 T . scaffold9517 ReadM SNP 0020.scaffold00069 338315 1 C A - ReadM INDEL 0020.scaffold00069 338372 1 A . - ScafM SNP 0020.scaffold00069 338663 1 T C scaffold9517 ScafM SNP 0020.scaffold00069 338765 1 T G scaffold9517 ScafM SNP 0020.scaffold00069 338915 1 A G scaffold9517 ScafM SNP 0020.scaffold00069 339200 1 C T scaffold9517 Both SNP 0020.scaffold00069 339204 1 C T scaffold9517 ReadM SNP 0020.scaffold00069 339634 1 G A - ReadM SNP 0020.scaffold00069 347551 1 T C - ReadM SNP 0020.scaffold00069 347796 1 T A - ReadM SNP 0020.scaffold00069 347877 1 A G - ScafM SNP 0020.scaffold00069 347892 2 CC TT scaffold19194 ScafM SNP 0020.scaffold00069 347902 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 348570 1 A G scaffold19194 Both SNP 0020.scaffold00069 349225 1 A G scaffold19194 ScafM SNP 0020.scaffold00069 349356 1 C A scaffold19194 Both SNP 0020.scaffold00069 349362 1 T G scaffold19194 ScafM SNP 0020.scaffold00069 351015 2 GG AT scaffold19194 ScafM INDEL 0020.scaffold00069 351113 2 TT .. scaffold19194 ReadM SNP 0020.scaffold00069 352459 1 T C - ReadM SNP 0020.scaffold00069 352462 1 C T - ReadM SNP 0020.scaffold00069 352540 2 AA GG - ScafM SNP 0020.scaffold00069 352697 1 A C scaffold19194 ScafM SNP 0020.scaffold00069 352727 1 G C scaffold19194 ScafM INDEL 0020.scaffold00069 352738 1 T . scaffold19194 ScafM SNP 0020.scaffold00069 352757 1 A C scaffold19194 Both SNP 0020.scaffold00069 352791 1 C A scaffold19194 Both SNP 0020.scaffold00069 352807 1 G A scaffold19194 Both SNP 0020.scaffold00069 352867 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 352918 1 A G scaffold19194 ScafM SNP 0020.scaffold00069 352929 1 A G scaffold19194 ScafM SNP 0020.scaffold00069 352939 1 T C scaffold19194 ScafM SNP 0020.scaffold00069 352951 1 A G scaffold19194 ScafM SNP 0020.scaffold00069 352959 1 T C scaffold19194 ScafM SNP 0020.scaffold00069 352963 1 G C scaffold19194 ScafM SNP 0020.scaffold00069 352982 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 352986 1 T C scaffold19194 ScafM SNP 0020.scaffold00069 353004 1 C A scaffold19194 ScafM SNP 0020.scaffold00069 353007 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 353036 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 353049 1 C A scaffold19194 ScafM INDEL 0020.scaffold00069 353062 1 . A scaffold19194 ScafM SNP 0020.scaffold00069 353064 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 353120 1 C G scaffold19194 ScafM SNP 0020.scaffold00069 353135 1 A G scaffold19194 ScafM INDEL 0020.scaffold00069 353146 1 T . scaffold19194 ScafM SNP 0020.scaffold00069 353193 1 T C scaffold19194 ScafM SNP 0020.scaffold00069 353237 1 G A scaffold19194 ScafM INDEL 0020.scaffold00069 353242 3 ACA ... scaffold19194 Both SNP 0020.scaffold00069 353402 1 G C scaffold19194 ScafM SNP 0020.scaffold00069 353438 1 G T scaffold19194 ScafM SNP 0020.scaffold00069 353523 1 A T scaffold19194 Both INDEL 0020.scaffold00069 353556 1 . T scaffold19194 Both SNP 0020.scaffold00069 353653 1 A G scaffold19194 ScafM SNP 0020.scaffold00069 353656 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 353658 1 T C scaffold19194 Both SNP 0020.scaffold00069 353855 1 G T scaffold19194 Both SNP 0020.scaffold00069 353860 1 C T scaffold19194 Both SNP 0020.scaffold00069 353884 1 G T scaffold19194 Both SNP 0020.scaffold00069 353937 1 G C scaffold19194 Both SNP 0020.scaffold00069 353944 1 T G scaffold19194 Both SNP 0020.scaffold00069 353974 1 A T scaffold19194 Both SNP 0020.scaffold00069 353996 1 G T scaffold19194 Both SNP 0020.scaffold00069 354042 1 G C scaffold19194 ScafM INDEL 0020.scaffold00069 354085 3 ... TAA scaffold19194 Both SNP 0020.scaffold00069 354146 1 T G scaffold19194 Both SNP 0020.scaffold00069 354203 1 T G scaffold19194 Both SNP 0020.scaffold00069 354227 1 A G scaffold19194 Both SNP 0020.scaffold00069 354481 1 G T scaffold19194 Both SNP 0020.scaffold00069 354791 1 C G scaffold19194 Both SNP 0020.scaffold00069 354876 1 C T scaffold19194 Both SNP 0020.scaffold00069 354907 1 T G scaffold19194 Both SNP 0020.scaffold00069 354915 1 T G scaffold19194 Both SNP 0020.scaffold00069 354938 1 G T scaffold19194 Both SNP 0020.scaffold00069 354944 1 G A scaffold19194 Both SNP 0020.scaffold00069 355042 1 A G scaffold19194 Both SNP 0020.scaffold00069 355206 1 A G scaffold19194 Both SNP 0020.scaffold00069 355613 1 T G scaffold19194 ReadM SNP 0020.scaffold00069 355798 1 T C - ReadM SNP 0020.scaffold00069 355805 1 T C - ScafM SNP 0020.scaffold00069 356007 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 356096 1 G A scaffold19194 ScafM INDEL 0020.scaffold00069 356098 4 TTTA .... scaffold19194 ScafM INDEL 0020.scaffold00069 356105 2 TT .. scaffold19194 ScafM SNP 0020.scaffold00069 356155 1 G A scaffold19194 ScafM INDEL 0020.scaffold00069 356217 1 . T scaffold19194 ScafM SNP 0020.scaffold00069 356221 1 A T scaffold19194 ScafM SNP 0020.scaffold00069 356294 1 A T scaffold19194 ScafM SNP 0020.scaffold00069 356380 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 356408 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 356434 1 T G scaffold19194 ScafM SNP 0020.scaffold00069 357345 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 357351 1 G A scaffold19194 ScafM INDEL 0020.scaffold00069 357376 13 GCCGGCGGCCATT ............. scaffold19194 ScafM INDEL 0020.scaffold00069 357413 7 TGAAGTT ....... scaffold19194 ScafM INDEL 0020.scaffold00069 357460 2 TG .. scaffold19194 ScafM INDEL 0020.scaffold00069 357467 7 TTTTGAT ....... scaffold19194 ScafM INDEL 0020.scaffold00069 357488 1 . T scaffold19194 ScafM INDEL 0020.scaffold00069 357510 1 T . scaffold19194 ScafM INDEL 0020.scaffold00069 357521 1 . C scaffold19194 ScafM SNP 0020.scaffold00069 357525 1 C T scaffold19194 ScafM INDEL 0020.scaffold00069 357536 1 C . scaffold19194 ScafM SNP 0020.scaffold00069 357539 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 357850 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 357870 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 357891 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 358033 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 358049 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 358054 1 G C scaffold19194 ScafM SNP 0020.scaffold00069 358063 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 358316 1 A C scaffold19194 ScafM SNP 0020.scaffold00069 358318 1 G A scaffold19194 Both INDEL 0020.scaffold00069 358440 1 . A scaffold19194 ScafM SNP 0020.scaffold00069 358549 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 358551 1 A T scaffold19194 ScafM SNP 0020.scaffold00069 358580 1 C G scaffold19194 ScafM INDEL 0020.scaffold00069 358593 44 TATACTTAATTTTACCCTTAACCACTCTAAACTCGTAACCAATG ............................................ scaffold19194 ScafM SNP 0020.scaffold00069 358647 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 358759 1 C T scaffold19194 Both SNP 0020.scaffold00069 358787 1 C A scaffold19194 ScafM SNP 0020.scaffold00069 358800 2 TC CT scaffold19194 Both SNP 0020.scaffold00069 358962 1 A G scaffold19194 Both SNP 0020.scaffold00069 359002 1 A G scaffold19194 Both SNP 0020.scaffold00069 359021 1 C A scaffold19194 Both SNP 0020.scaffold00069 359071 1 C T scaffold19194 Both SNP 0020.scaffold00069 359171 1 A T scaffold19194 Both SNP 0020.scaffold00069 359200 1 C A scaffold19194 Both INDEL 0020.scaffold00069 359218 1 . A scaffold19194 Both SNP 0020.scaffold00069 359263 1 T A scaffold19194 ScafM INDEL 0020.scaffold00069 359297 5 TATCT ..... scaffold19194 ScafM SNP 0020.scaffold00069 359303 1 C G scaffold19194 ScafM SNP 0020.scaffold00069 359354 1 T G scaffold19194 ScafM SNP 0020.scaffold00069 359372 1 T C scaffold19194 ScafM INDEL 0020.scaffold00069 359381 1 T . scaffold19194 ScafM INDEL 0020.scaffold00069 359415 1 . A scaffold19194 ScafM INDEL 0020.scaffold00069 359443 2 .. AA scaffold19194 ScafM INDEL 0020.scaffold00069 359465 1 . C scaffold19194 ScafM INDEL 0020.scaffold00069 359493 5 ..... ATGGG scaffold19194 ScafM INDEL 0020.scaffold00069 359498 25 ......................... ATTGCAAATTATGTCTTATGCAAAG scaffold19194 ScafM INDEL 0020.scaffold00069 359501 2 .. AG scaffold19194 ScafM SNP 0020.scaffold00069 359519 1 A C scaffold19194 ScafM SNP 0020.scaffold00069 359524 1 C T scaffold19194 ScafM SNP 0020.scaffold00069 359529 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 359536 1 T C scaffold19194 ScafM SNP 0020.scaffold00069 359554 1 G C scaffold19194 ScafM SNP 0020.scaffold00069 359564 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 359587 1 A C scaffold19194 ScafM INDEL 0020.scaffold00069 359644 6 TTTTTT ...... scaffold19194 ScafM INDEL 0020.scaffold00069 359759 1 . C scaffold19194 ScafM SNP 0020.scaffold00069 359762 1 A C scaffold19194 ScafM SNP 0020.scaffold00069 359764 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 359766 2 TT AA scaffold19194 Both SNP 0020.scaffold00069 359817 1 A T scaffold19194 Both SNP 0020.scaffold00069 359958 1 T C scaffold19194 ReadM SNP 0020.scaffold00069 359995 1 C T - ReadM SNP 0020.scaffold00069 360190 1 A G - ReadM SNP 0020.scaffold00069 360433 1 A C - ReadM SNP 0020.scaffold00069 360494 1 G A - ReadM SNP 0020.scaffold00069 360591 1 C A - ReadM SNP 0020.scaffold00069 360638 1 C T - ReadM SNP 0020.scaffold00069 360653 1 G A - ReadM SNP 0020.scaffold00069 360788 1 G A - ReadM SNP 0020.scaffold00069 360891 1 G A - ReadM SNP 0020.scaffold00069 360903 1 T C - ReadM SNP 0020.scaffold00069 361024 1 A T - ReadM SNP 0020.scaffold00069 361063 1 G T - ScafM SNP 0020.scaffold00069 361585 1 G A scaffold19194 ScafM SNP 0020.scaffold00069 361807 1 T A scaffold19194 ScafM SNP 0020.scaffold00069 362343 1 T C scaffold14562 ScafM SNP 0020.scaffold00069 365034 1 T A scaffold14562 ScafM SNP 0020.scaffold00069 365774 1 A G scaffold14562 ScafM INDEL 0020.scaffold00069 365790 1 T . scaffold14562 ScafM INDEL 0020.scaffold00069 365796 3 TCA ... scaffold14562 ScafM INDEL 0020.scaffold00069 365800 2 GT .. scaffold14562 ScafM INDEL 0020.scaffold00069 365803 2 AT .C scaffold14562 ScafM INDEL 0020.scaffold00069 365807 4 TTAT .... scaffold14562 ScafM SNP 0020.scaffold00069 365826 1 T A scaffold14562 ScafM SNP 0020.scaffold00069 365834 1 T G scaffold14562 ScafM SNP 0020.scaffold00069 365844 2 AG GA scaffold14562 ScafM SNP 0020.scaffold00069 365850 1 G A scaffold14562 ScafM SNP 0020.scaffold00069 365859 1 G A scaffold14562 ScafM SNP 0020.scaffold00069 365877 1 T C scaffold14562 ScafM SNP 0020.scaffold00069 365885 1 C T scaffold14562 ScafM SNP 0020.scaffold00069 365887 1 G C scaffold14562 ScafM SNP 0020.scaffold00069 365946 1 T A scaffold14562 ScafM SNP 0020.scaffold00069 365949 1 T C scaffold14562 ScafM SNP 0020.scaffold00069 365951 1 T C scaffold14562 Both SNP 0020.scaffold00069 372805 1 A T scaffold14562 Both SNP 0020.scaffold00069 372877 1 T C scaffold14562 ScafM INDEL 0020.scaffold00069 372905 10 CAATAAAACA .......... scaffold14562 ScafM INDEL 0020.scaffold00069 372917 2 CT .. scaffold14562 ScafM SNP 0020.scaffold00069 373009 1 T C scaffold14562 ScafM INDEL 0020.scaffold00069 373020 18 .................. TATTTTATTTCTCAACAA scaffold14562 Both SNP 0020.scaffold00069 373111 1 A C scaffold14562 ScafM INDEL 0020.scaffold00069 374771 21 ..................... TTAATAATAATAATAATAATA scaffold27165 ScafM INDEL 0020.scaffold00069 375019 4 CGAC .... scaffold27165 ScafM INDEL 0020.scaffold00069 375024 1 G . scaffold27165 ScafM SNP 0020.scaffold00069 375026 2 AA TT scaffold27165 ScafM SNP 0020.scaffold00069 375031 1 A G scaffold27165 ScafM INDEL 0020.scaffold00069 375035 1 A . scaffold27165 ScafM SNP 0020.scaffold00069 375037 1 T G scaffold27165 ScafM INDEL 0020.scaffold00069 375039 1 G . scaffold27165 ScafM INDEL 0020.scaffold00069 375042 1 G . scaffold27165 ScafM SNP 0020.scaffold00069 375103 1 A T scaffold27165 ScafM INDEL 0020.scaffold00069 375108 1 T . scaffold27165 ScafM SNP 0020.scaffold00069 375117 1 T C scaffold27165 ScafM INDEL 0020.scaffold00069 375282 2 TG .. scaffold27165 Both INDEL 0020.scaffold00069 375376 1 . C scaffold27165 ScafM INDEL 0020.scaffold00069 375484 4 .... TTGG scaffold27165 ReadM SNP 0020.scaffold00069 375485 1 G T - ScafM INDEL 0020.scaffold00069 375487 7 ....... TTTGTTT scaffold27165 ScafM INDEL 0020.scaffold00069 375488 1 . T scaffold27165 ScafM SNP 0020.scaffold00069 375798 1 T A scaffold27165 ScafM INDEL 0020.scaffold00069 375820 5 GTTTA ..... scaffold27165 ScafM SNP 0020.scaffold00069 375904 1 T C scaffold27165 ScafM INDEL 0020.scaffold00069 375947 6 TTTTGT ...... scaffold27165 ScafM SNP 0020.scaffold00069 375954 1 T C scaffold27165 ScafM SNP 0020.scaffold00069 375974 1 T A scaffold27165 ScafM SNP 0020.scaffold00069 375976 1 G C scaffold27165 ReadM SNP 0020.scaffold00069 376093 1 T C - ReadM SNP 0020.scaffold00069 376147 1 G T - ReadM SNP 0020.scaffold00069 376179 1 A C - ReadM SNP 0020.scaffold00069 376188 1 T C - ReadM SNP 0020.scaffold00069 376200 1 A G - ReadM SNP 0020.scaffold00069 376303 2 TG CA - ReadM SNP 0020.scaffold00069 376381 1 T C - ReadM SNP 0020.scaffold00069 376485 1 C T - ReadM SNP 0020.scaffold00069 376490 1 C T - ReadM SNP 0020.scaffold00069 376531 1 T C - Both SNP 0020.scaffold00069 376606 1 T C C19703429 Both SNP 0020.scaffold00069 376621 1 C T C19703429 Both SNP 0020.scaffold00069 376712 1 G A C19703429 Both INDEL 0020.scaffold00069 376842 1 . T C19703429 Both SNP 0020.scaffold00069 376867 1 A G C19703429 Both SNP 0020.scaffold00069 376870 1 A G C19703429 Both INDEL 0020.scaffold00069 376925 2 AC .. C19703429 Both SNP 0020.scaffold00069 376966 1 A G C19703429 ScafM SNP 0020.scaffold00069 376997 1 A G C19703429 ScafM SNP 0020.scaffold00069 377000 1 G C C19703429 Both SNP 0020.scaffold00069 377025 1 T C C19703429 Both INDEL 0020.scaffold00069 377152 1 . T C19703429 ScafM SNP 0020.scaffold00069 377190 1 C T C19703429 ScafM SNP 0020.scaffold00069 377198 1 G A C19703429 ScafM SNP 0020.scaffold00069 377200 2 TC CT C19703429 ScafM SNP 0020.scaffold00069 377207 1 C T C19703429 ScafM SNP 0020.scaffold00069 377226 1 C A C19703429 ScafM SNP 0020.scaffold00069 377252 1 A G C19703429 ScafM SNP 0020.scaffold00069 377295 1 G A C19703429 ScafM SNP 0020.scaffold00069 377298 1 T C C19703429 ScafM SNP 0020.scaffold00069 377311 1 A G C19703429 ScafM SNP 0020.scaffold00069 377330 1 T A C19703429 ReadM INDEL 0020.scaffold00069 377949 1 . A - ReadM SNP 0020.scaffold00069 378057 1 C A - ReadM SNP 0020.scaffold00069 378148 1 G A - ReadM SNP 0020.scaffold00069 378228 1 A T - ReadM SNP 0020.scaffold00069 378355 1 T C - ReadM SNP 0020.scaffold00069 378391 1 C T - ReadM SNP 0020.scaffold00069 378399 1 A G - ReadM SNP 0020.scaffold00069 378421 1 A T - ReadM INDEL 0020.scaffold00069 378445 1 . T - ReadM SNP 0020.scaffold00069 378553 1 G C - ReadM SNP 0020.scaffold00069 378626 1 T C - ReadM SNP 0020.scaffold00069 378692 1 A T - ReadM SNP 0020.scaffold00069 378717 1 G C - ReadM SNP 0020.scaffold00069 378883 1 T C - ScafM INDEL 0020.scaffold00069 378919 1 T . scaffold2034 Both SNP 0020.scaffold00069 378932 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 378955 1 T G scaffold2034 Both SNP 0020.scaffold00069 379164 1 C T scaffold2034 Both SNP 0020.scaffold00069 379302 1 T C scaffold2034 Both SNP 0020.scaffold00069 379326 1 C T scaffold2034 Both SNP 0020.scaffold00069 379383 1 T A scaffold2034 Both SNP 0020.scaffold00069 379584 2 GG TT scaffold2034 Both SNP 0020.scaffold00069 379675 1 T G scaffold2034 Both SNP 0020.scaffold00069 379759 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 379769 1 A T scaffold2034 Both SNP 0020.scaffold00069 379813 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 379859 1 G A scaffold2034 Both SNP 0020.scaffold00069 379869 1 T C scaffold2034 Both SNP 0020.scaffold00069 379974 1 T A scaffold2034 Both SNP 0020.scaffold00069 380161 1 T C scaffold2034 Both SNP 0020.scaffold00069 380186 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 380368 1 T G scaffold2034 Both SNP 0020.scaffold00069 380535 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 380607 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 380643 1 C T scaffold2034 Both SNP 0020.scaffold00069 380655 1 T A scaffold2034 Both SNP 0020.scaffold00069 380673 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 380689 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 380745 1 T C scaffold2034 Both SNP 0020.scaffold00069 380755 1 A G scaffold2034 Both SNP 0020.scaffold00069 380896 1 A T scaffold2034 Both SNP 0020.scaffold00069 381503 1 T G scaffold2034 Both SNP 0020.scaffold00069 381526 1 A T scaffold2034 Both SNP 0020.scaffold00069 381540 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 381578 2 AT GA scaffold2034 Both SNP 0020.scaffold00069 381597 1 G T scaffold2034 Both SNP 0020.scaffold00069 381631 1 A G scaffold2034 Both SNP 0020.scaffold00069 381655 1 A T scaffold2034 Both SNP 0020.scaffold00069 381761 1 A T scaffold2034 Both SNP 0020.scaffold00069 381784 1 T A scaffold2034 Both SNP 0020.scaffold00069 381833 1 T C scaffold2034 Both SNP 0020.scaffold00069 381847 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 381926 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 381931 3 GTA .AG scaffold2034 Both SNP 0020.scaffold00069 381954 1 A G scaffold2034 Both INDEL 0020.scaffold00069 381979 1 T . scaffold2034 Both SNP 0020.scaffold00069 382004 1 T C scaffold2034 Both SNP 0020.scaffold00069 382063 1 C A scaffold2034 Both SNP 0020.scaffold00069 382132 1 A C scaffold2034 Both SNP 0020.scaffold00069 382206 1 G C scaffold2034 Both SNP 0020.scaffold00069 382224 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 382232 4 .... ACAT scaffold2034 Both SNP 0020.scaffold00069 382360 1 T C scaffold2034 Both SNP 0020.scaffold00069 382561 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 382595 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 382605 3 ... ATT scaffold2034 ScafM SNP 0020.scaffold00069 382617 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 382630 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 382647 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 382670 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 382698 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 382724 1 G A scaffold2034 ReadM SNP 0020.scaffold00069 382877 1 A G - ReadM INDEL 0020.scaffold00069 382949 1 T . - ReadM SNP 0020.scaffold00069 383293 1 C T - ReadM SNP 0020.scaffold00069 383330 1 G A - ReadM SNP 0020.scaffold00069 383354 1 C T - ReadM SNP 0020.scaffold00069 383398 1 G T - ReadM SNP 0020.scaffold00069 383430 1 A G - ReadM SNP 0020.scaffold00069 384047 1 G A - ReadM SNP 0020.scaffold00069 384090 1 G C - ReadM SNP 0020.scaffold00069 384367 1 G A - ReadM SNP 0020.scaffold00069 384376 1 C A - ReadM SNP 0020.scaffold00069 384523 1 A G - ReadM SNP 0020.scaffold00069 384858 1 G A - ReadM SNP 0020.scaffold00069 384864 1 C T - ScafM SNP 0020.scaffold00069 384996 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385009 1 A T scaffold2034 ReadM SNP 0020.scaffold00069 385120 1 C T - ScafM SNP 0020.scaffold00069 385227 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 385229 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385233 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 385243 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 385245 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 385249 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 385267 2 GT AA scaffold2034 ScafM SNP 0020.scaffold00069 385282 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385288 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 385290 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 385292 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385307 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 385334 1 . A scaffold2034 ScafM INDEL 0020.scaffold00069 385336 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 385340 2 CC .. scaffold2034 ScafM INDEL 0020.scaffold00069 385343 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 385346 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 385347 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 385363 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385367 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 385369 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 385372 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385382 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 385412 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 385418 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 385420 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 385433 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 385446 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 385687 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 385718 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 385727 4 CCTA .... scaffold2034 ScafM SNP 0020.scaffold00069 385734 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 385786 3 TAA ... scaffold2034 ScafM INDEL 0020.scaffold00069 385834 1 C . scaffold2034 ScafM SNP 0020.scaffold00069 386204 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 386239 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 386249 1 T . scaffold2034 ScafM INDEL 0020.scaffold00069 386252 1 G . scaffold2034 ScafM INDEL 0020.scaffold00069 386269 7 TGACCTT ....... scaffold2034 ScafM SNP 0020.scaffold00069 386306 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 386310 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 386326 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 386338 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 386349 9 AGAAAAAAG ......... scaffold2034 ScafM INDEL 0020.scaffold00069 386364 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 386394 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 386430 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 386456 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 386468 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 386932 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 386940 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 386944 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 386964 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 386999 8 TGGCCTGA ........ scaffold2034 ScafM SNP 0020.scaffold00069 387019 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 387028 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 387033 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 387037 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 387051 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 387081 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 387086 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 387095 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 387125 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 387155 1 C . scaffold2034 ScafM INDEL 0020.scaffold00069 387161 8 TACTCAAA ........ scaffold2034 ScafM INDEL 0020.scaffold00069 387215 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 387344 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 388503 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 388507 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 388511 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 388519 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 388527 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 388529 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 388542 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 388549 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 388562 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 388587 5 ..... TATAA scaffold2034 ScafM SNP 0020.scaffold00069 388594 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 388606 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 388616 2 GC AA scaffold2034 ScafM SNP 0020.scaffold00069 388639 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 388654 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 388664 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 388691 4 GCTA .... scaffold2034 ScafM SNP 0020.scaffold00069 388726 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 388746 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 388762 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 388769 5 ..... CGTAC scaffold2034 ScafM INDEL 0020.scaffold00069 388770 3 ... TTC scaffold2034 ScafM SNP 0020.scaffold00069 388791 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 388832 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 389320 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 389509 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 389537 4 ATAT .... scaffold2034 ScafM SNP 0020.scaffold00069 389559 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 389568 4 CCGG .... scaffold2034 ScafM SNP 0020.scaffold00069 389575 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 394429 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 394476 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 394580 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 394724 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 394728 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 394731 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 394744 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 394747 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 394782 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 394805 1 G C scaffold2034 ScafM INDEL 0020.scaffold00069 394878 3 ACG ... scaffold2034 ScafM SNP 0020.scaffold00069 394886 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 394892 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 394908 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 394939 1 A C scaffold2034 ScafM INDEL 0020.scaffold00069 394965 3 ... TAA scaffold2034 ScafM SNP 0020.scaffold00069 394967 1 G T scaffold2034 Both SNP 0020.scaffold00069 394980 1 G A scaffold2034 Both SNP 0020.scaffold00069 395035 1 A T scaffold2034 Both SNP 0020.scaffold00069 395246 1 G A scaffold2034 Both SNP 0020.scaffold00069 395380 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 395386 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 395416 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 395425 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 395438 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 395513 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 395518 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 395524 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 395530 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 395539 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 395572 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 395684 1 C . scaffold2034 ScafM INDEL 0020.scaffold00069 395692 7 TTACAAG ....... scaffold2034 ScafM SNP 0020.scaffold00069 395708 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 395730 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 395731 4 .... CGGT scaffold2034 ScafM INDEL 0020.scaffold00069 395733 2 .. TG scaffold2034 ScafM SNP 0020.scaffold00069 395736 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 395738 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 395773 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 395780 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 396532 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 396543 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 396557 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 396583 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 396589 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 396592 2 TT GA scaffold2034 ScafM INDEL 0020.scaffold00069 396596 3 GAT ... scaffold2034 ScafM SNP 0020.scaffold00069 396603 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 396605 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 396621 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 396632 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 396645 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 396681 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 396692 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 396764 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 396794 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 396796 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 396805 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 396817 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 396821 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 396824 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 397064 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 397072 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 397084 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 397093 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 397097 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 397100 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 397110 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 397127 2 .. TC scaffold2034 ScafM SNP 0020.scaffold00069 397130 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 397143 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 397170 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 397199 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 397213 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 397253 1 C . scaffold2034 ScafM INDEL 0020.scaffold00069 397293 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 397303 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 397952 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 397971 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 397979 3 CTG ... scaffold2034 ScafM SNP 0020.scaffold00069 397988 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 398030 2 .. GA scaffold2034 ScafM SNP 0020.scaffold00069 398065 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 398074 2 AT .. scaffold2034 ScafM INDEL 0020.scaffold00069 398077 2 AA .. scaffold2034 ScafM INDEL 0020.scaffold00069 398080 5 ATATA ..... scaffold2034 ScafM SNP 0020.scaffold00069 398127 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 398134 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 398145 4 .... TTAA scaffold2034 ScafM INDEL 0020.scaffold00069 398163 1 . G scaffold2034 ScafM SNP 0020.scaffold00069 398167 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 398170 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 398182 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 398203 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 398207 2 CA AT scaffold2034 ScafM SNP 0020.scaffold00069 398254 1 T G scaffold2034 ScafM INDEL 0020.scaffold00069 399375 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 399381 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 399384 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 399438 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 399456 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 399491 2 CG .. scaffold2034 ScafM SNP 0020.scaffold00069 399510 2 AC GA scaffold2034 ScafM SNP 0020.scaffold00069 399522 2 TA GT scaffold2034 ReadM SNP 0020.scaffold00069 400120 1 A G - ReadM SNP 0020.scaffold00069 400126 1 T A - ReadM SNP 0020.scaffold00069 400172 1 G A - ReadM SNP 0020.scaffold00069 400260 1 T A - ReadM SNP 0020.scaffold00069 400341 1 T G - ScafM INDEL 0020.scaffold00069 400514 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 400524 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 400550 1 T A scaffold2034 Both SNP 0020.scaffold00069 400669 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 400709 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 400922 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 400939 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 400949 2 AG TC scaffold2034 ScafM SNP 0020.scaffold00069 401009 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 401037 5 ..... TTGAA scaffold2034 ScafM INDEL 0020.scaffold00069 401039 11 ........... TGACACGCGAA scaffold2034 ScafM SNP 0020.scaffold00069 405104 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 405118 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 405232 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 405239 1 C A scaffold2034 Both INDEL 0020.scaffold00069 405523 3 TGA ... scaffold2034 Both SNP 0020.scaffold00069 405649 1 C T scaffold2034 Both SNP 0020.scaffold00069 405707 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 405723 7 ....... GAGTTAA scaffold2034 ScafM SNP 0020.scaffold00069 405738 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 405746 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 405770 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 405775 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 405787 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 405793 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 405803 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 405815 11 ........... ACCACAATTAA scaffold2034 ScafM SNP 0020.scaffold00069 405838 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 405853 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 405876 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 405879 2 .C TT scaffold2034 ScafM SNP 0020.scaffold00069 405888 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 405891 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 405898 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 405908 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 405918 21 ACCACCAGACACTTAGCTACA ..................... scaffold2034 ScafM SNP 0020.scaffold00069 405966 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 405987 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406010 1 T G scaffold2034 ScafM INDEL 0020.scaffold00069 406016 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 406025 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406041 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406081 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406083 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406097 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406102 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406121 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406123 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406127 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 406135 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406138 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406158 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406164 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 406167 3 TGG ... scaffold2034 ScafM INDEL 0020.scaffold00069 406173 2 TA .. scaffold2034 ScafM SNP 0020.scaffold00069 406192 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 406199 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406238 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406249 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 406258 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 406310 2 TA CC scaffold2034 ScafM SNP 0020.scaffold00069 406326 2 CT AC scaffold2034 ScafM SNP 0020.scaffold00069 406332 2 TT CG scaffold2034 ScafM SNP 0020.scaffold00069 406356 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406365 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406370 2 TG AC scaffold2034 ScafM SNP 0020.scaffold00069 406374 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406385 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406389 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 406406 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406412 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406415 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 406417 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406429 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406462 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 406482 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406498 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 406505 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 406513 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 406536 4 AGAT .... scaffold2034 ScafM INDEL 0020.scaffold00069 406548 2 TT .. scaffold2034 ScafM SNP 0020.scaffold00069 406571 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 406587 2 AA GG scaffold2034 ScafM SNP 0020.scaffold00069 406603 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 406610 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 406615 2 .. AC scaffold2034 ScafM INDEL 0020.scaffold00069 406622 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 406626 3 ATT GAA scaffold2034 ScafM SNP 0020.scaffold00069 406633 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 406635 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406666 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 406684 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406700 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406728 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406745 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 406746 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 406750 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 406764 1 . G scaffold2034 ScafM SNP 0020.scaffold00069 406773 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 406775 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406779 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 406781 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406783 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 406793 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 406798 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 406812 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 406819 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 409564 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 409567 2 GC .A scaffold2034 ScafM SNP 0020.scaffold00069 409579 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 409601 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 409609 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 409630 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 409645 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 409647 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 409663 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 409675 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 409702 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 409723 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 409740 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 409746 2 GT AC scaffold2034 ScafM SNP 0020.scaffold00069 409753 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 409766 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 409772 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 409783 2 AA CG scaffold2034 ScafM SNP 0020.scaffold00069 409789 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 409802 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 409818 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 409821 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 411070 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 411090 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 411113 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 411139 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 411141 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 411467 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 411474 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 411476 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 411480 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 411482 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 411484 1 . G scaffold2034 ScafM SNP 0020.scaffold00069 411501 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 411524 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 411528 6 ...... GATCAT scaffold2034 ScafM INDEL 0020.scaffold00069 411532 1 . C scaffold2034 ScafM SNP 0020.scaffold00069 411538 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 411549 3 TTA ... scaffold2034 ScafM SNP 0020.scaffold00069 411558 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 411561 1 G C scaffold2034 ScafM INDEL 0020.scaffold00069 411567 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 411591 2 GG TA scaffold2034 ScafM INDEL 0020.scaffold00069 411594 2 AA .G scaffold2034 ScafM INDEL 0020.scaffold00069 411618 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 411817 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 411821 1 A . scaffold2034 ScafM INDEL 0020.scaffold00069 411824 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 411828 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 411830 3 TGC CAT scaffold2034 ScafM INDEL 0020.scaffold00069 411839 1 . C scaffold2034 Both SNP 0020.scaffold00069 411942 1 C T scaffold2034 Both SNP 0020.scaffold00069 411948 1 A G scaffold2034 Both SNP 0020.scaffold00069 412234 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 412305 2 CT .. scaffold2034 ScafM INDEL 0020.scaffold00069 412312 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 412314 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 412354 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 412361 1 C T scaffold2034 ReadM SNP 0020.scaffold00069 412417 1 C T - ScafM SNP 0020.scaffold00069 412476 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 412485 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 412487 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 412510 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 412518 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 412536 3 AGA ... scaffold2034 ScafM INDEL 0020.scaffold00069 412548 2 .. GT scaffold2034 ScafM SNP 0020.scaffold00069 412556 1 C G scaffold2034 ScafM INDEL 0020.scaffold00069 412558 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 412561 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 412673 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 412679 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 412704 4 TTTT .... scaffold2034 Both SNP 0020.scaffold00069 412923 1 T A scaffold2034 Both SNP 0020.scaffold00069 412939 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 412955 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 412974 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 412995 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 412999 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 413004 1 . G scaffold2034 ScafM SNP 0020.scaffold00069 413044 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 413113 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 413156 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 413160 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 413179 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 413186 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 413197 1 C G scaffold2034 ScafM INDEL 0020.scaffold00069 413204 1 A . scaffold2034 Both SNP 0020.scaffold00069 413236 1 C T scaffold2034 Both SNP 0020.scaffold00069 413269 1 A G scaffold2034 Both INDEL 0020.scaffold00069 413330 1 C . scaffold2034 ScafM SNP 0020.scaffold00069 413349 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 413643 9 TATAGTTTT ......... scaffold2034 ScafM INDEL 0020.scaffold00069 413656 1 C . scaffold2034 ScafM INDEL 0020.scaffold00069 413658 9 GGAAAAGGG ......... scaffold2034 ScafM SNP 0020.scaffold00069 413697 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 413702 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 413704 1 A . scaffold2034 ScafM INDEL 0020.scaffold00069 413708 4 AATT .... scaffold2034 ScafM INDEL 0020.scaffold00069 413713 6 TTATAA ...... scaffold2034 ScafM INDEL 0020.scaffold00069 413744 4 .... GTTG scaffold2034 Both SNP 0020.scaffold00069 413807 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 414005 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 414133 1 G A scaffold2034 Both SNP 0020.scaffold00069 414241 1 T G scaffold2034 Both SNP 0020.scaffold00069 414290 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 414305 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 414353 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 414362 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 414380 1 G C scaffold2034 ScafM INDEL 0020.scaffold00069 414392 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 414427 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 414431 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 414435 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 414458 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415235 1 T C scaffold2034 Both SNP 0020.scaffold00069 415289 2 AA GT scaffold2034 ScafM SNP 0020.scaffold00069 415359 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 415361 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 415372 2 AA .. scaffold2034 ScafM INDEL 0020.scaffold00069 415375 5 TATTT ..... scaffold2034 ScafM INDEL 0020.scaffold00069 415381 4 ACAT .... scaffold2034 ScafM INDEL 0020.scaffold00069 415388 3 TGT ... scaffold2034 ScafM SNP 0020.scaffold00069 415445 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 415448 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 415459 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 415470 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 415496 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 415504 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 415508 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415511 3 ATT CAC scaffold2034 ScafM SNP 0020.scaffold00069 415524 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415530 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 415540 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 415548 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 415553 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415571 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 415574 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 415579 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 415591 4 GTTG ..AC scaffold2034 ScafM INDEL 0020.scaffold00069 415599 6 TGTTTT .....A scaffold2034 ScafM SNP 0020.scaffold00069 415606 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 415650 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415660 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 415683 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 415702 8 GGATCAAC ........ scaffold2034 ScafM INDEL 0020.scaffold00069 415711 3 AAG ... scaffold2034 ScafM SNP 0020.scaffold00069 415720 1 C A scaffold2034 Both SNP 0020.scaffold00069 415736 1 T C scaffold2034 Both SNP 0020.scaffold00069 415752 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 415903 13 ............. AATTAGACTAAAT scaffold2034 ScafM INDEL 0020.scaffold00069 415907 8 ........ ATATGGAG scaffold2034 ScafM INDEL 0020.scaffold00069 415908 3 ... AGA scaffold2034 ScafM SNP 0020.scaffold00069 415962 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 415995 2 CT TG scaffold2034 ScafM SNP 0020.scaffold00069 416008 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 416011 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 416025 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 416037 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 416056 2 CG TT scaffold2034 ScafM SNP 0020.scaffold00069 416130 1 G C scaffold2034 Both SNP 0020.scaffold00069 416171 1 A T scaffold2034 Both SNP 0020.scaffold00069 416371 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 416547 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 416566 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 416617 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 416620 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 416632 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 416634 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 416659 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 416670 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 416688 3 GAG TTA scaffold2034 ScafM SNP 0020.scaffold00069 416701 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 416706 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 416709 1 T . scaffold2034 Both SNP 0020.scaffold00069 416780 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 416830 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 416855 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 417762 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 417791 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 417795 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 417822 8 AATAGTCA ........ scaffold2034 ScafM SNP 0020.scaffold00069 417913 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 418022 1 C . scaffold2034 ScafM SNP 0020.scaffold00069 418038 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 418040 1 T . scaffold2034 Both INDEL 0020.scaffold00069 418229 1 T . scaffold2034 Both SNP 0020.scaffold00069 418269 1 A C scaffold2034 Both SNP 0020.scaffold00069 418281 1 G A scaffold2034 ReadM SNP 0020.scaffold00069 418338 1 T C - Both SNP 0020.scaffold00069 418575 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 418824 1 T C scaffold2034 Both SNP 0020.scaffold00069 419158 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 419421 4 .... TATA scaffold2034 ScafM INDEL 0020.scaffold00069 419573 2 .. TT scaffold2034 ScafM SNP 0020.scaffold00069 419658 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 419687 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 419701 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 419743 2 .. TT scaffold2034 ScafM INDEL 0020.scaffold00069 419756 4 TATT .... scaffold2034 ScafM INDEL 0020.scaffold00069 419812 2 .. CA scaffold2034 ScafM SNP 0020.scaffold00069 419826 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 419828 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 419885 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 419897 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 419899 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 419955 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 419977 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 421210 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 421212 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 421237 1 G A scaffold2034 ReadM SNP 0020.scaffold00069 421548 1 G A - ReadM SNP 0020.scaffold00069 421600 1 G A - ReadM INDEL 0020.scaffold00069 421645 1 . A - ReadM SNP 0020.scaffold00069 421661 1 A T - ScafM SNP 0020.scaffold00069 421884 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 421886 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 421917 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 421923 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 421931 1 . T scaffold2034 ScafM INDEL 0020.scaffold00069 421942 4 GTAA .... scaffold2034 ScafM SNP 0020.scaffold00069 421947 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 421985 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 421994 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 422360 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 422393 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 422419 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 422423 2 TA CT scaffold2034 ScafM SNP 0020.scaffold00069 422440 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 422483 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 422498 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 422784 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 422795 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 422806 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 422830 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 422881 1 A C scaffold2034 ScafM INDEL 0020.scaffold00069 422882 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 422928 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 423005 2 .. AA scaffold2034 ScafM SNP 0020.scaffold00069 423009 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 423101 2 TA CG scaffold2034 ScafM SNP 0020.scaffold00069 423110 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 423541 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 424927 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 424933 1 A G scaffold2034 ScafM INDEL 0020.scaffold00069 424952 3 AAC ... scaffold2034 ScafM INDEL 0020.scaffold00069 424962 6 TTATAG ...... scaffold2034 ScafM SNP 0020.scaffold00069 424977 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 424982 2 CG GC scaffold2034 ScafM SNP 0020.scaffold00069 425000 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 425014 3 CAG ... scaffold2034 ScafM SNP 0020.scaffold00069 425020 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 425023 1 G . scaffold2034 ScafM INDEL 0020.scaffold00069 425025 2 .T CA scaffold2034 ScafM SNP 0020.scaffold00069 425038 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 425041 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 425065 1 A C scaffold2034 ScafM INDEL 0020.scaffold00069 425074 14 .............. AGTACTGACTACTG scaffold2034 ScafM SNP 0020.scaffold00069 425091 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 425107 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 425112 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 425114 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 425161 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 425166 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 425176 2 .. AT scaffold2034 ScafM SNP 0020.scaffold00069 425208 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 425259 1 T G scaffold2034 ScafM INDEL 0020.scaffold00069 425301 2 .. GG scaffold2034 ScafM SNP 0020.scaffold00069 425303 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 425308 1 A G scaffold2034 Both SNP 0020.scaffold00069 425400 1 G A scaffold2034 Both SNP 0020.scaffold00069 425406 1 A C scaffold2034 Both SNP 0020.scaffold00069 425556 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 425610 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 425613 1 . T scaffold2034 Both SNP 0020.scaffold00069 425621 1 T G scaffold2034 Both SNP 0020.scaffold00069 425647 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 426001 1 G A scaffold2034 Both SNP 0020.scaffold00069 426135 1 G A scaffold2034 Both INDEL 0020.scaffold00069 426171 1 . G scaffold2034 Both SNP 0020.scaffold00069 426338 1 G C scaffold2034 Both SNP 0020.scaffold00069 426449 1 G A scaffold2034 Both SNP 0020.scaffold00069 426856 1 C G scaffold2034 Both SNP 0020.scaffold00069 427031 1 T C scaffold2034 Both SNP 0020.scaffold00069 427091 1 C T scaffold2034 Both SNP 0020.scaffold00069 427274 1 G T scaffold2034 Both SNP 0020.scaffold00069 427457 1 G T scaffold2034 Both SNP 0020.scaffold00069 427524 1 G A scaffold2034 Both SNP 0020.scaffold00069 427759 1 A T scaffold2034 Both INDEL 0020.scaffold00069 427806 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 427812 1 A T scaffold2034 Both SNP 0020.scaffold00069 427974 1 G A scaffold2034 Both SNP 0020.scaffold00069 428020 1 G A scaffold2034 Both SNP 0020.scaffold00069 428104 1 A T scaffold2034 Both SNP 0020.scaffold00069 428131 1 G A scaffold2034 Both INDEL 0020.scaffold00069 428381 2 .. AG scaffold2034 Both SNP 0020.scaffold00069 428540 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 428560 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 428569 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 428594 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 428603 3 ... AAT scaffold2034 ReadM SNP 0020.scaffold00069 430281 1 T C - ReadM INDEL 0020.scaffold00069 430336 1 A . - ScafM SNP 0020.scaffold00069 430459 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 430463 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 430482 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 430527 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 430617 3 ... TGT scaffold2034 ScafM SNP 0020.scaffold00069 430626 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 430667 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 430672 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 430901 1 T A scaffold2034 ScafM INDEL 0020.scaffold00069 430904 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 430939 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 430949 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 430975 1 G C scaffold2034 ReadM SNP 0020.scaffold00069 431300 1 G A - ReadM SNP 0020.scaffold00069 431359 1 T G - ScafM SNP 0020.scaffold00069 431433 1 T G scaffold2034 ScafM INDEL 0020.scaffold00069 431442 1 . T scaffold2034 ScafM INDEL 0020.scaffold00069 431445 5 ..... AGTTG scaffold2034 ScafM INDEL 0020.scaffold00069 431448 4 .... TCAG scaffold2034 ScafM INDEL 0020.scaffold00069 431450 2 .. CA scaffold2034 ScafM INDEL 0020.scaffold00069 431451 2 .. TT scaffold2034 ScafM INDEL 0020.scaffold00069 431454 1 . T scaffold2034 ScafM SNP 0020.scaffold00069 431526 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 431570 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 431590 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 431596 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 431655 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 431657 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 431661 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 431705 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 431710 1 T G scaffold2034 ScafM INDEL 0020.scaffold00069 431738 2 .. AT scaffold2034 Both SNP 0020.scaffold00069 431776 1 T C scaffold2034 Both SNP 0020.scaffold00069 431780 1 G T scaffold2034 Both SNP 0020.scaffold00069 431810 1 A T scaffold2034 Both SNP 0020.scaffold00069 431892 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 431919 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 431921 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 431924 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 431942 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 431946 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 431983 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 431988 6 ...... CGCTGA scaffold2034 ScafM SNP 0020.scaffold00069 432032 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 432036 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 432079 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 432083 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 432102 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 432114 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 432122 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 432180 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 432195 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 432367 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 432372 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 432418 3 ... AAT scaffold2034 ScafM SNP 0020.scaffold00069 432433 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 432452 17 ................. GTGCACATTACAGAAGG scaffold2034 ScafM INDEL 0020.scaffold00069 432456 14 .............. TGAAATTACAAATT scaffold2034 ScafM SNP 0020.scaffold00069 432521 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 432539 1 C A scaffold2034 ReadM SNP 0020.scaffold00069 432881 1 G C - ScafM SNP 0020.scaffold00069 432997 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 433003 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 433019 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 433059 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 433061 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 433071 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 433077 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 433116 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 433160 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 433216 2 TG GA scaffold2034 ScafM SNP 0020.scaffold00069 433224 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 433243 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 433247 1 T C scaffold2034 ScafM INDEL 0020.scaffold00069 433256 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 433265 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 433278 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 433281 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 433306 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 433314 2 GG AT scaffold2034 ScafM INDEL 0020.scaffold00069 433317 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 433329 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 433355 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 433360 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 433362 2 AG GC scaffold2034 Both SNP 0020.scaffold00069 433402 1 A G scaffold2034 Both SNP 0020.scaffold00069 433428 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 433892 1 . T scaffold2034 ScafM INDEL 0020.scaffold00069 433947 4 .... ATAA scaffold2034 ScafM INDEL 0020.scaffold00069 433948 2 .. TT scaffold2034 Both SNP 0020.scaffold00069 434000 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 434065 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 434097 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 434114 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 434116 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 434120 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 434164 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 434170 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434172 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434218 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434241 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 434259 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434272 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 434302 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434306 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434314 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434373 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 434397 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434493 1 G A scaffold2034 Both SNP 0020.scaffold00069 434498 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 434503 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 434531 1 A C scaffold2034 ScafM INDEL 0020.scaffold00069 434575 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 434594 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 434603 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434624 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434661 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434668 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434686 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434689 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 434695 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 434705 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 434708 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434713 2 CA TT scaffold2034 ScafM SNP 0020.scaffold00069 434718 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 434748 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 434765 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434777 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 434788 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434790 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 434814 1 G T scaffold2034 ReadM SNP 0020.scaffold00069 434879 1 C A - ReadM SNP 0020.scaffold00069 435029 1 C T - ScafM SNP 0020.scaffold00069 435350 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 435397 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 435399 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 435417 1 T C scaffold2034 Both SNP 0020.scaffold00069 435452 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 435495 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 435509 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 435512 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 435517 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 435528 1 G A scaffold2034 Both SNP 0020.scaffold00069 435605 1 T C scaffold2034 Both SNP 0020.scaffold00069 435607 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 435622 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 435648 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 435673 2 AT CC scaffold2034 ScafM SNP 0020.scaffold00069 435741 1 G T scaffold2034 ReadM SNP 0020.scaffold00069 435945 1 C T - ReadM SNP 0020.scaffold00069 435987 1 T C - ReadM SNP 0020.scaffold00069 436043 1 A C - ReadM INDEL 0020.scaffold00069 436050 1 . C - ReadM SNP 0020.scaffold00069 436344 1 T A - ReadM INDEL 0020.scaffold00069 436476 1 A . - ReadM SNP 0020.scaffold00069 436482 1 T G - ReadM SNP 0020.scaffold00069 436495 1 T C - ReadM SNP 0020.scaffold00069 436505 1 G C - ReadM SNP 0020.scaffold00069 436530 1 C T - ReadM SNP 0020.scaffold00069 436626 2 TG AA - ScafM SNP 0020.scaffold00069 436997 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 437005 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 437018 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 437035 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 437047 1 C A scaffold2034 ScafM SNP 0020.scaffold00069 437556 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 437573 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 437584 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 437586 1 C T scaffold2034 ScafM INDEL 0020.scaffold00069 437624 1 . T scaffold2034 Both SNP 0020.scaffold00069 437696 1 A C scaffold2034 Both SNP 0020.scaffold00069 437742 1 T C scaffold2034 Both SNP 0020.scaffold00069 437748 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 437812 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 437817 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 437832 1 A G scaffold2034 ScafM SNP 0020.scaffold00069 437846 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 437859 1 C A scaffold2034 ScafM INDEL 0020.scaffold00069 437881 1 A . scaffold2034 ScafM INDEL 0020.scaffold00069 437893 6 ...... CTGTTC scaffold2034 ScafM SNP 0020.scaffold00069 437917 1 G A scaffold2034 Both SNP 0020.scaffold00069 437921 1 T C scaffold2034 Both SNP 0020.scaffold00069 437974 1 T A scaffold2034 Both INDEL 0020.scaffold00069 438052 1 . A scaffold2034 Both SNP 0020.scaffold00069 438080 1 G A scaffold2034 Both SNP 0020.scaffold00069 438119 1 A G scaffold2034 Both SNP 0020.scaffold00069 438131 1 T C scaffold2034 Both SNP 0020.scaffold00069 438230 1 A T scaffold2034 Both SNP 0020.scaffold00069 438296 1 T A scaffold2034 Both SNP 0020.scaffold00069 438424 1 C T scaffold2034 Both INDEL 0020.scaffold00069 438475 3 GTT ... scaffold2034 ReadM SNP 0020.scaffold00069 438667 1 G C - ReadM SNP 0020.scaffold00069 438742 1 T C - ReadM SNP 0020.scaffold00069 438757 1 A G - ReadM SNP 0020.scaffold00069 438767 1 T C - ReadM SNP 0020.scaffold00069 438785 1 C T - Both SNP 0020.scaffold00069 438842 1 A C scaffold2034 Both INDEL 0020.scaffold00069 438900 1 . A scaffold2034 Both SNP 0020.scaffold00069 438911 1 C G scaffold2034 Both SNP 0020.scaffold00069 438997 1 G A scaffold2034 Both SNP 0020.scaffold00069 439001 1 G A scaffold2034 Both SNP 0020.scaffold00069 439251 1 G A scaffold2034 Both SNP 0020.scaffold00069 439436 1 A C scaffold2034 Both SNP 0020.scaffold00069 439463 1 T A scaffold2034 Both SNP 0020.scaffold00069 439535 1 A C scaffold2034 Both SNP 0020.scaffold00069 439541 1 A G scaffold2034 Both SNP 0020.scaffold00069 439676 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 439693 2 GA CC scaffold2034 ScafM SNP 0020.scaffold00069 439796 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 439820 1 C G scaffold2034 Both SNP 0020.scaffold00069 440025 1 C G scaffold2034 Both SNP 0020.scaffold00069 440036 1 T G scaffold2034 Both SNP 0020.scaffold00069 440259 1 G T scaffold2034 Both SNP 0020.scaffold00069 440388 1 C A scaffold2034 Both SNP 0020.scaffold00069 440647 1 A C scaffold2034 Both SNP 0020.scaffold00069 440653 1 A C scaffold2034 ScafM SNP 0020.scaffold00069 440682 1 A T scaffold2034 ScafM INDEL 0020.scaffold00069 440685 2 .. CA scaffold2034 ScafM INDEL 0020.scaffold00069 440689 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 440693 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 440695 1 . C scaffold2034 ScafM INDEL 0020.scaffold00069 440704 1 T . scaffold2034 ScafM SNP 0020.scaffold00069 440856 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 440861 1 A C scaffold2034 ScafM INDEL 0020.scaffold00069 440940 1 A . scaffold2034 Both SNP 0020.scaffold00069 440958 1 A G scaffold2034 Both SNP 0020.scaffold00069 441028 1 A C scaffold2034 Both SNP 0020.scaffold00069 441079 1 G A scaffold2034 Both SNP 0020.scaffold00069 441155 1 C T scaffold2034 Both SNP 0020.scaffold00069 441342 1 G A scaffold2034 Both SNP 0020.scaffold00069 441661 1 G A scaffold2034 Both SNP 0020.scaffold00069 441668 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 441754 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 441774 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 441793 1 T A scaffold2034 Both SNP 0020.scaffold00069 441863 1 T G scaffold2034 Both SNP 0020.scaffold00069 442255 1 T C scaffold2034 Both SNP 0020.scaffold00069 442295 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 442469 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 442562 1 A G scaffold2034 Both SNP 0020.scaffold00069 442588 1 C T scaffold2034 Both INDEL 0020.scaffold00069 442691 3 ... AAT scaffold2034 ScafM SNP 0020.scaffold00069 442734 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 442790 1 A T scaffold2034 ReadM SNP 0020.scaffold00069 442972 1 A G - ReadM SNP 0020.scaffold00069 442997 1 A G - ScafM INDEL 0020.scaffold00069 443126 1 . T scaffold8286 ScafM SNP 0020.scaffold00069 443129 3 CGG ATA scaffold8286 ScafM INDEL 0020.scaffold00069 443134 1 . A scaffold8286 ScafM INDEL 0020.scaffold00069 443137 8 TGTGGTCT .......A scaffold8286 ScafM SNP 0020.scaffold00069 443159 1 T A scaffold8286 ScafM SNP 0020.scaffold00069 443170 1 G T scaffold8286 ScafM SNP 0020.scaffold00069 443197 1 G A scaffold8286 ScafM SNP 0020.scaffold00069 443227 1 C T scaffold8286 Both SNP 0020.scaffold00069 443321 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 443695 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 443698 1 T C scaffold2034 ReadM SNP 0020.scaffold00069 443792 1 A T - Both SNP 0020.scaffold00069 443844 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 443891 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 443903 1 T A scaffold2034 Both SNP 0020.scaffold00069 443920 1 T C scaffold2034 Both SNP 0020.scaffold00069 443960 1 C T scaffold2034 Both SNP 0020.scaffold00069 444118 1 C T scaffold2034 Both SNP 0020.scaffold00069 444169 1 G A scaffold2034 Both SNP 0020.scaffold00069 444186 1 T C scaffold2034 Both SNP 0020.scaffold00069 444335 1 T A scaffold2034 Both INDEL 0020.scaffold00069 444410 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 444558 2 CG TA scaffold2034 ScafM INDEL 0020.scaffold00069 444583 1 A . scaffold2034 ScafM SNP 0020.scaffold00069 444608 1 G A scaffold2034 ScafM SNP 0020.scaffold00069 444615 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 444634 1 C T scaffold2034 ScafM SNP 0020.scaffold00069 444649 1 A T scaffold2034 Both SNP 0020.scaffold00069 444674 1 C T scaffold2034 Both SNP 0020.scaffold00069 444684 1 G C scaffold2034 Both SNP 0020.scaffold00069 444694 1 G A scaffold2034 Both SNP 0020.scaffold00069 444778 1 C G scaffold2034 Both SNP 0020.scaffold00069 444853 1 T A scaffold2034 Both SNP 0020.scaffold00069 444928 1 G T scaffold2034 ScafM INDEL 0020.scaffold00069 445335 4 CCCG .... scaffold2034 ScafM SNP 0020.scaffold00069 445341 1 G T scaffold2034 Both SNP 0020.scaffold00069 445441 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 445600 8 GGTCAAGC ........ scaffold2034 Both SNP 0020.scaffold00069 445688 1 C T scaffold2034 Both SNP 0020.scaffold00069 445693 1 A G scaffold2034 Both SNP 0020.scaffold00069 445707 1 C T scaffold2034 Both SNP 0020.scaffold00069 445731 1 G A scaffold2034 Both SNP 0020.scaffold00069 445910 1 C T scaffold2034 Both SNP 0020.scaffold00069 445955 1 C T scaffold2034 Both SNP 0020.scaffold00069 446148 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 446196 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 446201 1 G A scaffold2034 ScafM INDEL 0020.scaffold00069 446204 1 G . scaffold2034 ScafM SNP 0020.scaffold00069 446224 1 T A scaffold2034 Both SNP 0020.scaffold00069 446549 1 A T scaffold2034 Both SNP 0020.scaffold00069 446559 1 G T scaffold2034 Both SNP 0020.scaffold00069 446691 1 T G scaffold2034 Both SNP 0020.scaffold00069 446758 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 446933 1 T A scaffold2034 ScafM SNP 0020.scaffold00069 446960 1 T G scaffold2034 ScafM SNP 0020.scaffold00069 447137 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 447162 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 448793 1 T C scaffold2034 ScafM SNP 0020.scaffold00069 448800 1 G C scaffold2034 ScafM SNP 0020.scaffold00069 448818 2 TA GG scaffold2034 ScafM SNP 0020.scaffold00069 448833 1 G T scaffold2034 ScafM SNP 0020.scaffold00069 448836 3 CTC AGT scaffold2034 ScafM INDEL 0020.scaffold00069 448843 2 .. AT scaffold2034 ScafM SNP 0020.scaffold00069 448845 1 C G scaffold2034 ScafM SNP 0020.scaffold00069 448874 1 G C scaffold2034 ScafM INDEL 0020.scaffold00069 448879 9 ......... AATTTAATT scaffold2034 ScafM SNP 0020.scaffold00069 448896 1 A T scaffold2034 ScafM SNP 0020.scaffold00069 448914 2 GC AT scaffold2034 ScafM INDEL 0020.scaffold00069 448936 1 . A scaffold2034 ScafM SNP 0020.scaffold00069 449957 1 T C scaffold2675 ScafM SNP 0020.scaffold00069 449963 1 G T scaffold2675 ScafM SNP 0020.scaffold00069 449967 1 T C scaffold2675 ScafM INDEL 0020.scaffold00069 449988 2 .. AG scaffold2675 ScafM SNP 0020.scaffold00069 450028 1 G C scaffold2675 ScafM SNP 0020.scaffold00069 450030 1 G A scaffold2675 ReadM INDEL 0020.scaffold00069 452273 1 . C - Both SNP 0020.scaffold00069 452298 1 G T scaffold16857 Both INDEL 0020.scaffold00069 452418 1 . A scaffold16857 ScafM SNP 0020.scaffold00069 452487 1 C T scaffold16857 ScafM SNP 0020.scaffold00069 452491 1 T A scaffold16857 ScafM SNP 0020.scaffold00069 452541 1 T C scaffold16857 ScafM SNP 0020.scaffold00069 452546 1 C T scaffold16857 ScafM INDEL 0020.scaffold00069 452583 6 ...... AAAAAC scaffold16857 ScafM SNP 0020.scaffold00069 452613 1 C T scaffold16857 ScafM INDEL 0020.scaffold00069 452617 1 . T scaffold16857 ScafM SNP 0020.scaffold00069 452730 1 A G scaffold16857 ScafM SNP 0020.scaffold00069 452745 1 A G scaffold16857 ScafM INDEL 0020.scaffold00069 452831 2 .G AA scaffold16857 ScafM SNP 0020.scaffold00069 452860 1 A G scaffold16857 ScafM INDEL 0020.scaffold00069 452875 1 T . scaffold16857 ScafM SNP 0020.scaffold00069 452877 1 T A scaffold16857 ScafM INDEL 0020.scaffold00069 452900 1 T . scaffold16857 ScafM SNP 0020.scaffold00069 452902 2 TT AA scaffold16857 ScafM SNP 0020.scaffold00069 452932 1 A G scaffold16857 ScafM SNP 0020.scaffold00069 452966 1 T C scaffold16857 ScafM SNP 0020.scaffold00069 453001 1 G T scaffold16857 ScafM SNP 0020.scaffold00069 453014 1 A G scaffold16857 Both SNP 0020.scaffold00069 453056 1 C T scaffold16857 Both SNP 0020.scaffold00069 453059 1 T C scaffold16857 Both SNP 0020.scaffold00069 453077 1 T A scaffold16857 ReadM SNP 0020.scaffold00069 453161 1 T G - ReadM SNP 0020.scaffold00069 453223 1 A T - ReadM SNP 0020.scaffold00069 453229 1 T C - ReadM INDEL 0020.scaffold00069 453293 1 G . - ReadM SNP 0020.scaffold00069 453373 1 A G - Both SNP 0020.scaffold00069 453587 1 A G scaffold16857 Both SNP 0020.scaffold00069 453641 1 G A scaffold16857 Both SNP 0020.scaffold00069 453715 1 C T scaffold16857 Both SNP 0020.scaffold00069 453787 1 T C scaffold16857 Both SNP 0020.scaffold00069 453869 1 T A scaffold16857 Both SNP 0020.scaffold00069 453898 1 A G scaffold16857 Both SNP 0020.scaffold00069 454015 1 C G scaffold16857 ReadM SNP 0020.scaffold00069 454051 1 A G - ScafM SNP 0020.scaffold00069 454198 1 C A scaffold16857 ScafM SNP 0020.scaffold00069 454280 1 G T scaffold16857 ScafM SNP 0020.scaffold00069 454340 1 C T scaffold16857 ScafM SNP 0020.scaffold00069 454361 1 A G scaffold16857 ScafM SNP 0020.scaffold00069 454448 1 A G scaffold16857 ScafM SNP 0020.scaffold00069 454451 3 GCA ATG scaffold16857 ScafM SNP 0020.scaffold00069 454467 1 A G scaffold16857 ScafM INDEL 0020.scaffold00069 454471 1 . T scaffold16857 ScafM SNP 0020.scaffold00069 456108 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 456155 3 ... TAA scaffold35336 ScafM SNP 0020.scaffold00069 456162 1 C T scaffold35336 ScafM INDEL 0020.scaffold00069 456170 2 TT .. scaffold35336 ScafM SNP 0020.scaffold00069 456186 1 G A scaffold35336 ScafM SNP 0020.scaffold00069 456222 1 C A scaffold35336 ScafM INDEL 0020.scaffold00069 456230 1 C . scaffold35336 ScafM INDEL 0020.scaffold00069 456232 1 C . scaffold35336 ScafM SNP 0020.scaffold00069 456234 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 456235 1 . C scaffold35336 ScafM SNP 0020.scaffold00069 456243 2 GA AG scaffold35336 ScafM SNP 0020.scaffold00069 456267 1 A G scaffold35336 ScafM INDEL 0020.scaffold00069 456278 3 ... TAT scaffold35336 ScafM SNP 0020.scaffold00069 456284 1 G A scaffold35336 ScafM SNP 0020.scaffold00069 456303 1 T A scaffold35336 ScafM SNP 0020.scaffold00069 456315 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 456327 1 . A scaffold35336 ScafM SNP 0020.scaffold00069 456334 1 G A scaffold35336 ScafM SNP 0020.scaffold00069 456364 1 T C scaffold35336 ScafM SNP 0020.scaffold00069 456367 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 456406 6 ...... TCTTAA scaffold35336 ScafM INDEL 0020.scaffold00069 456408 1 . C scaffold35336 ScafM INDEL 0020.scaffold00069 456419 2 .. TT scaffold35336 ScafM SNP 0020.scaffold00069 456423 1 C T scaffold35336 ScafM SNP 0020.scaffold00069 456441 1 A G scaffold35336 ScafM SNP 0020.scaffold00069 456924 1 C T scaffold35336 ScafM SNP 0020.scaffold00069 456932 1 T A scaffold35336 ScafM INDEL 0020.scaffold00069 456935 3 ACA ... scaffold35336 ScafM INDEL 0020.scaffold00069 456943 2 CT .. scaffold35336 ScafM INDEL 0020.scaffold00069 456973 2 TC .. scaffold35336 ScafM INDEL 0020.scaffold00069 456983 2 AA .. scaffold35336 ScafM SNP 0020.scaffold00069 456987 1 A G scaffold35336 ScafM SNP 0020.scaffold00069 457161 1 A C scaffold35336 ScafM INDEL 0020.scaffold00069 457215 2 .. AT scaffold35336 ScafM INDEL 0020.scaffold00069 457234 5 TTAGT ....C scaffold35336 ScafM SNP 0020.scaffold00069 457254 1 T C scaffold35336 ScafM SNP 0020.scaffold00069 457293 1 T G scaffold35336 ScafM INDEL 0020.scaffold00069 457305 1 . T scaffold35336 ScafM SNP 0020.scaffold00069 457315 1 T A scaffold35336 ScafM SNP 0020.scaffold00069 457359 1 C G scaffold35336 ScafM SNP 0020.scaffold00069 457398 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 457446 7 CCGTGTA ....... scaffold35336 ScafM SNP 0020.scaffold00069 457456 1 T A scaffold35336 ScafM INDEL 0020.scaffold00069 457477 4 AAAA .... scaffold35336 ScafM SNP 0020.scaffold00069 457488 1 G A scaffold35336 ScafM SNP 0020.scaffold00069 457495 1 G A scaffold35336 ScafM INDEL 0020.scaffold00069 457655 4 .... ATTA scaffold35336 ScafM INDEL 0020.scaffold00069 457666 1 . A scaffold35336 ScafM INDEL 0020.scaffold00069 457683 2 TC .A scaffold35336 ScafM SNP 0020.scaffold00069 457688 1 A C scaffold35336 ScafM SNP 0020.scaffold00069 457705 1 A G scaffold35336 ScafM SNP 0020.scaffold00069 457716 1 A G scaffold35336 ScafM SNP 0020.scaffold00069 457721 1 A T scaffold35336 ScafM SNP 0020.scaffold00069 457740 1 C A scaffold35336 ScafM SNP 0020.scaffold00069 457749 1 T G scaffold35336 ScafM SNP 0020.scaffold00069 457761 1 T C scaffold35336 ScafM INDEL 0020.scaffold00069 457769 1 . C scaffold35336 ScafM INDEL 0020.scaffold00069 457770 3 ... TGC scaffold35336 ScafM SNP 0020.scaffold00069 457784 1 G C scaffold35336 ScafM SNP 0020.scaffold00069 457788 2 GA TT scaffold35336 ScafM INDEL 0020.scaffold00069 457793 1 A . scaffold35336 ScafM INDEL 0020.scaffold00069 457795 2 .T GA scaffold35336 ScafM SNP 0020.scaffold00069 457798 1 C G scaffold35336 ScafM SNP 0020.scaffold00069 457803 1 C T scaffold35336 ScafM SNP 0020.scaffold00069 457805 4 AATT CTAC scaffold35336 ScafM INDEL 0020.scaffold00069 457827 15 AGCCTCGAATAATAC ............... scaffold35336 ScafM INDEL 0020.scaffold00069 457843 1 C . scaffold35336 ScafM INDEL 0020.scaffold00069 457847 1 A . scaffold35336 ScafM INDEL 0020.scaffold00069 457851 2 TT .. scaffold35336 ScafM INDEL 0020.scaffold00069 457876 5 GGATT ..... scaffold35336 ScafM INDEL 0020.scaffold00069 457882 2 AG .. scaffold35336 ScafM SNP 0020.scaffold00069 457890 1 G T scaffold35336 ScafM SNP 0020.scaffold00069 457899 1 A G scaffold35336 ScafM SNP 0020.scaffold00069 457945 1 G A scaffold35336 ScafM SNP 0021.scaffold00073 21859 1 A G scaffold1824 ScafM SNP 0021.scaffold00073 21933 1 G A scaffold1824 ScafM SNP 0021.scaffold00073 21941 1 G C scaffold1824 ScafM SNP 0021.scaffold00073 21954 1 C T scaffold1824 ScafM SNP 0021.scaffold00073 21971 1 G A scaffold1824 ScafM SNP 0021.scaffold00073 21990 1 A T scaffold1824 ScafM SNP 0021.scaffold00073 21996 1 G A scaffold1824 ScafM SNP 0021.scaffold00073 22009 1 T G scaffold1824 ScafM SNP 0021.scaffold00073 22025 1 G A scaffold1824 ScafM SNP 0021.scaffold00073 22028 1 T G scaffold1824 ScafM SNP 0021.scaffold00073 22047 1 T A scaffold1824 ScafM SNP 0021.scaffold00073 22051 1 G C scaffold1824 ScafM SNP 0021.scaffold00073 22099 1 C T scaffold1824 ScafM SNP 0021.scaffold00073 52463 1 G A scaffold1061 ScafM SNP 0021.scaffold00073 52467 1 C G scaffold1061 ScafM SNP 0021.scaffold00073 52470 1 T C scaffold1061 ScafM INDEL 0021.scaffold00073 52472 1 . C scaffold1061 ScafM SNP 0021.scaffold00073 52474 1 G A scaffold1061 ScafM SNP 0021.scaffold00073 52476 1 A T scaffold1061 ReadM INDEL 0021.scaffold00073 52815 2 AT .. - ScafM INDEL 0021.scaffold00073 55506 1 . T scaffold1824 ScafM SNP 0021.scaffold00073 62556 1 G A scaffold1402 ScafM SNP 0021.scaffold00073 62717 1 T C scaffold1402 Both SNP 0021.scaffold00073 63166 1 A T scaffold1402 ScafM SNP 0021.scaffold00073 63678 1 T A scaffold1402 ScafM INDEL 0021.scaffold00073 78891 12 ............ TTTTTTTTTTTT scaffold7934 ScafM SNP 0021.scaffold00073 78893 3 AGG TTT scaffold7934 ScafM INDEL 0021.scaffold00073 90074 1 C . scaffold7934 ScafM SNP 0021.scaffold00073 158226 1 T A scaffold10071 ScafM SNP 0021.scaffold00073 158234 1 T A scaffold10071 ScafM SNP 0021.scaffold00073 158655 1 T C scaffold10071 ScafM INDEL 0021.scaffold00073 158708 3 ... TGA scaffold10071 ScafM INDEL 0021.scaffold00073 177050 1 G . scaffold10071 ScafM INDEL 0021.scaffold00073 199551 2 AA .. scaffold10071 ScafM INDEL 0021.scaffold00073 199557 18 ACTGTCCAGCACCTTTCA .................. scaffold10071 ScafM INDEL 0021.scaffold00073 199579 4 TTTT .... scaffold10071 ScafM INDEL 0021.scaffold00073 199584 7 ATATGTG ....... scaffold10071 ReadM SNP 0021.scaffold00073 215893 1 C T - ScafM SNP 0021.scaffold00073 223154 1 T C scaffold1837 ScafM SNP 0021.scaffold00073 223180 1 C T scaffold1837 ScafM SNP 0021.scaffold00073 223303 1 T C scaffold1837 ScafM SNP 0021.scaffold00073 223311 1 A T scaffold1837 ScafM SNP 0021.scaffold00073 223578 1 C G scaffold6647 ScafM SNP 0021.scaffold00073 223629 1 G A scaffold6647 ScafM SNP 0021.scaffold00073 223632 1 A G scaffold6647 ScafM SNP 0021.scaffold00073 223658 1 T A scaffold6647 ScafM SNP 0021.scaffold00073 223664 2 TC AT scaffold6647 ScafM SNP 0021.scaffold00073 223675 2 TA CC scaffold6647 ScafM SNP 0021.scaffold00073 223680 1 C T scaffold6647 ScafM SNP 0021.scaffold00073 233945 1 G T scaffold46096 ScafM SNP 0021.scaffold00073 234095 1 G C scaffold46096 ScafM SNP 0021.scaffold00073 234512 1 T C scaffold6647 ScafM INDEL 0021.scaffold00073 234529 2 .. CT scaffold6647 ScafM SNP 0021.scaffold00073 234564 1 C T scaffold6647 ScafM SNP 0021.scaffold00073 234857 1 A T scaffold6647 ScafM SNP 0021.scaffold00073 234922 1 C A scaffold6647 ScafM SNP 0021.scaffold00073 234949 1 A T scaffold6647 ScafM INDEL 0021.scaffold00073 234952 1 T . scaffold6647 ScafM SNP 0021.scaffold00073 234999 1 C T scaffold6647 ScafM SNP 0021.scaffold00073 235142 1 G T scaffold6647 ScafM SNP 0021.scaffold00073 235173 1 T C scaffold6647 ScafM SNP 0021.scaffold00073 235237 1 G A scaffold6647 ScafM SNP 0021.scaffold00073 235244 1 A T scaffold6647 ScafM SNP 0021.scaffold00073 315825 1 G A scaffold11311 ReadM INDEL 0021.scaffold00073 364993 1 . T - Both SNP 0021.scaffold00073 365769 1 C T scaffold11413 Both SNP 0021.scaffold00073 459127 1 A G scaffold20235 ScafM SNP 0021.scaffold00073 478921 1 C A scaffold20235 ScafM SNP 0021.scaffold00073 501820 1 T C scaffold20235 ScafM INDEL 0021.scaffold00073 501860 50 .................................................. AAAAAAAAAAAAAAATACATCCGTCGAACAAGTCTGTGTTCAACCGTTAA scaffold20235 ScafM SNP 0021.scaffold00073 503035 1 C T C19741702 ReadM INDEL 0021.scaffold00073 503937 1 . T - Both INDEL 0021.scaffold00073 503939 1 . C C19741702 ScafM SNP 0021.scaffold00073 503943 1 A C C19741702 ReadM SNP 0021.scaffold00073 525001 1 A G - Both INDEL 0021.scaffold00073 541760 1 A . scaffold11757 ScafM INDEL 0021.scaffold00073 600969 1 . G scaffold11757 ScafM INDEL 0021.scaffold00073 602874 1 . A scaffold11757 ReadM INDEL 0021.scaffold00073 606254 1 . A - ScafM INDEL 0021.scaffold00073 623771 1 . T scaffold11757 ScafM SNP 0021.scaffold00073 678353 1 G A scaffold3389 ReadM INDEL 0021.scaffold00073 685133 1 A . - ReadM SNP 0021.scaffold00073 765497 1 C T - ScafM SNP 0021.scaffold00073 766445 1 C T scaffold20253 ScafM SNP 0021.scaffold00073 766539 1 T A scaffold20253 ScafM SNP 0021.scaffold00073 768264 1 G C scaffold5714 ScafM SNP 0021.scaffold00073 768272 1 A C scaffold5714 ScafM SNP 0021.scaffold00073 768283 1 T C scaffold5714 ScafM SNP 0021.scaffold00073 768300 1 C T scaffold5714 ScafM SNP 0021.scaffold00073 768329 1 C A scaffold5714 ScafM SNP 0021.scaffold00073 768390 1 T C scaffold5714 ScafM SNP 0021.scaffold00073 768392 1 G A scaffold5714 ScafM SNP 0021.scaffold00073 768399 1 C A scaffold5714 ScafM INDEL 0021.scaffold00073 768420 1 . T scaffold5714 ScafM SNP 0021.scaffold00073 768432 1 C G scaffold5714 ScafM SNP 0021.scaffold00073 768439 1 C T scaffold5714 ScafM SNP 0021.scaffold00073 768479 1 G T scaffold5714 ScafM SNP 0021.scaffold00073 768498 1 A G scaffold5714 ScafM SNP 0021.scaffold00073 768507 1 G C scaffold5714 ScafM SNP 0021.scaffold00073 768535 1 G T scaffold5714 ScafM SNP 0021.scaffold00073 768548 1 C T scaffold5714 ScafM SNP 0021.scaffold00073 768553 1 G C scaffold5714 ScafM SNP 0021.scaffold00073 768556 1 G A scaffold5714 ScafM SNP 0021.scaffold00073 768564 2 GA AG scaffold5714 ScafM SNP 0021.scaffold00073 768588 1 G A scaffold5714 ScafM SNP 0021.scaffold00073 768607 1 C A scaffold5714 ScafM SNP 0021.scaffold00073 768625 1 T A scaffold5714 ScafM INDEL 0021.scaffold00073 768645 9 ......... GCTGAGACT scaffold5714 ScafM SNP 0021.scaffold00073 768661 1 A G scaffold5714 ScafM SNP 0021.scaffold00073 768705 1 T C scaffold5714 ScafM SNP 0021.scaffold00073 768718 1 T G scaffold5714 ScafM SNP 0021.scaffold00073 772145 1 C A scaffold24128 ScafM SNP 0021.scaffold00073 776854 1 T C scaffold2194 ScafM SNP 0021.scaffold00073 776860 1 T C scaffold2194 ScafM INDEL 0021.scaffold00073 783403 1 . T scaffold15677 ScafM INDEL 0021.scaffold00073 832717 1 . T scaffold9839 ScafM SNP 0021.scaffold00073 851167 1 C T scaffold9839 ScafM SNP 0021.scaffold00073 852353 1 A C scaffold9839 ScafM SNP 0021.scaffold00073 853046 1 C T scaffold9839 ScafM SNP 0021.scaffold00073 853968 1 T C scaffold9839 ScafM SNP 0021.scaffold00073 854760 1 T C scaffold3948 ScafM SNP 0021.scaffold00073 854767 1 G A scaffold3948 ScafM SNP 0021.scaffold00073 854779 1 A G scaffold3948 ScafM SNP 0021.scaffold00073 854797 1 T A scaffold3948 ScafM INDEL 0021.scaffold00073 854804 1 C . scaffold3948 ScafM INDEL 0021.scaffold00073 854806 1 . G scaffold3948 ScafM SNP 0021.scaffold00073 854819 1 A G scaffold3948 ScafM SNP 0021.scaffold00073 854825 2 AC GT scaffold3948 ScafM SNP 0021.scaffold00073 854829 1 C G scaffold3948 ScafM INDEL 0021.scaffold00073 854832 3 ACG ... scaffold3948 ScafM SNP 0021.scaffold00073 854840 2 AA CG scaffold3948 ScafM SNP 0021.scaffold00073 854849 1 T G scaffold3948 ScafM SNP 0021.scaffold00073 854853 1 T C scaffold3948 ScafM INDEL 0021.scaffold00073 854881 4 .... ACAA scaffold3948 ScafM SNP 0021.scaffold00073 854903 1 A C scaffold3948 ScafM INDEL 0021.scaffold00073 854918 3 ATA .CC scaffold3948 ScafM SNP 0021.scaffold00073 854925 2 CC TT scaffold3948 ScafM SNP 0021.scaffold00073 854928 1 A G scaffold3948 ScafM SNP 0021.scaffold00073 854943 1 T A scaffold3948 ScafM INDEL 0021.scaffold00073 854944 1 . C scaffold3948 ScafM SNP 0021.scaffold00073 854974 1 G A scaffold3948 ScafM SNP 0021.scaffold00073 854985 1 C T scaffold3948 ScafM SNP 0021.scaffold00073 855007 1 T C scaffold3948 ScafM SNP 0021.scaffold00073 855012 1 A G scaffold3948 ScafM SNP 0021.scaffold00073 874373 1 G T scaffold16842 ScafM SNP 0021.scaffold00073 874376 1 T G scaffold16842 ScafM SNP 0021.scaffold00073 945024 1 T A scaffold16847 ReadM SNP 0021.scaffold00073 947186 1 G A - Both SNP 0021.scaffold00073 955207 1 A T scaffold16847 Both INDEL 0021.scaffold00073 955569 1 . T scaffold16847 ReadM INDEL 0021.scaffold00073 957878 1 . T - ReadM SNP 0021.scaffold00073 969818 1 C T - ScafM SNP 0021.scaffold00073 970791 1 T A scaffold9659 ReadM SNP 0021.scaffold00073 983450 1 C T - ScafM INDEL 0021.scaffold00073 1002919 5 TCGAA ..... scaffold209 ScafM SNP 0021.scaffold00073 1002934 1 T C scaffold209 ScafM INDEL 0021.scaffold00073 1024897 1 . T scaffold209 Both INDEL 0021.scaffold00073 1025010 1 . T scaffold209 ScafM INDEL 0021.scaffold00073 1025047 1 . T scaffold209 ScafM INDEL 0021.scaffold00073 1025068 1 . T scaffold209 ScafM INDEL 0021.scaffold00073 1025096 1 . T scaffold209 ScafM INDEL 0021.scaffold00073 1025106 1 . T scaffold209 ScafM INDEL 0021.scaffold00073 1025113 1 . T scaffold209 ScafM SNP 0021.scaffold00073 1030543 1 C T scaffold209 ScafM SNP 0021.scaffold00073 1030807 1 A G scaffold209 ScafM SNP 0021.scaffold00073 1030923 1 A T scaffold209 ScafM INDEL 0021.scaffold00073 1030928 1 . T scaffold209 ReadM INDEL 0021.scaffold00073 1043817 3 TGT ... - ScafM SNP 0021.scaffold00073 1050667 1 T C scaffold15097 ScafM SNP 0021.scaffold00073 1050690 1 A G scaffold15097 ScafM SNP 0021.scaffold00073 1050703 1 T A scaffold15097 ScafM SNP 0021.scaffold00073 1050719 1 T G scaffold15097 ScafM SNP 0021.scaffold00073 1050770 1 T A scaffold15097 ScafM SNP 0021.scaffold00073 1050804 1 T C scaffold15097 ScafM SNP 0021.scaffold00073 1050914 1 A G scaffold15097 ScafM SNP 0021.scaffold00073 1050947 1 T C scaffold15097 ScafM SNP 0021.scaffold00073 1050984 1 G A scaffold15097 ScafM SNP 0021.scaffold00073 1051022 1 T C scaffold15097 ScafM INDEL 0021.scaffold00073 1051048 1 . A scaffold15097 ScafM SNP 0021.scaffold00073 1051091 1 A T scaffold15097 ScafM SNP 0021.scaffold00073 1051106 1 C T scaffold15097 ScafM SNP 0021.scaffold00073 1051291 1 A G scaffold15097 ScafM SNP 0021.scaffold00073 1051317 1 A G scaffold15097 ScafM SNP 0021.scaffold00073 1051319 1 G A scaffold15097 ScafM SNP 0021.scaffold00073 1051352 1 T C scaffold15097 ScafM INDEL 0021.scaffold00073 1051384 2 .. GG scaffold15097 ScafM SNP 0021.scaffold00073 1051420 1 G T scaffold15097 ScafM SNP 0021.scaffold00073 1080232 1 T A scaffold16168 ScafM INDEL 0021.scaffold00073 1094814 6 ...... GGGGGG scaffold16168 ScafM SNP 0021.scaffold00073 1096655 2 TC AA scaffold16168 ScafM SNP 0021.scaffold00073 1096659 4 TGTC AAAA scaffold16168 ScafM SNP 0021.scaffold00073 1096665 1 T A scaffold16168 ScafM SNP 0021.scaffold00073 1096667 2 TC AA scaffold16168 ScafM SNP 0021.scaffold00073 1096670 2 TT AA scaffold16168 ScafM SNP 0021.scaffold00073 1096674 3 GGT AAA scaffold16168 ScafM INDEL 0021.scaffold00073 1199700 1 . A scaffold984 ReadM SNP 0021.scaffold00073 1214065 1 C T - ScafM SNP 0021.scaffold00073 1235977 1 T C scaffold7938 ScafM SNP 0021.scaffold00073 1236003 1 T A scaffold7938 ScafM SNP 0021.scaffold00073 1236006 1 T G scaffold7938 ScafM SNP 0021.scaffold00073 1236015 1 T C scaffold7938 ScafM SNP 0021.scaffold00073 1236037 1 T G scaffold7938 ScafM SNP 0021.scaffold00073 1236042 1 T G scaffold7938 ScafM SNP 0021.scaffold00073 1236046 1 T A scaffold7938 ScafM SNP 0021.scaffold00073 1236049 1 C T scaffold7938 ScafM SNP 0021.scaffold00073 1236086 1 G A scaffold7938 Both INDEL 0021.scaffold00073 1240964 1 A . scaffold2929 ScafM SNP 0021.scaffold00073 1241232 1 T C scaffold2929 ScafM SNP 0021.scaffold00073 1241818 1 A G scaffold2929 ScafM INDEL 0021.scaffold00073 1270652 1 C . scaffold2929 ReadM SNP 0021.scaffold00073 1299127 1 C T - ReadM SNP 0021.scaffold00073 1299155 1 A C - ScafM INDEL 0021.scaffold00073 1304164 1 . G scaffold2929 ScafM SNP 0021.scaffold00073 1304166 2 TC GA scaffold2929 ScafM SNP 0021.scaffold00073 1311102 1 A G scaffold20326 ScafM SNP 0021.scaffold00073 1311148 1 G T scaffold20326 ScafM SNP 0021.scaffold00073 1311154 1 T G scaffold20326 ScafM SNP 0021.scaffold00073 1311160 1 T C scaffold20326 ScafM SNP 0021.scaffold00073 1311212 1 C A scaffold20326 ScafM SNP 0021.scaffold00073 1311218 1 C T scaffold20326 ScafM INDEL 0021.scaffold00073 1311249 1 . A scaffold41617 ScafM SNP 0021.scaffold00073 1311276 1 T C scaffold41617 ScafM SNP 0021.scaffold00073 1311324 1 A G scaffold41617 ScafM INDEL 0021.scaffold00073 1311330 2 CT .. scaffold41617 ScafM INDEL 0021.scaffold00073 1311333 2 GC .. scaffold41617 ScafM INDEL 0021.scaffold00073 1311362 1 . C scaffold41617 ScafM SNP 0021.scaffold00073 1311450 1 A T scaffold41617 ScafM SNP 0021.scaffold00073 1311508 1 C G scaffold41617 ScafM INDEL 0021.scaffold00073 1311523 5 TGCCT ..... scaffold41617 ScafM SNP 0021.scaffold00073 1311557 1 A C scaffold41617 ScafM INDEL 0021.scaffold00073 1326509 1 . T scaffold8093 ScafM INDEL 0021.scaffold00073 1387023 1 . T scaffold21650 ScafM INDEL 0021.scaffold00073 1401602 1 C . scaffold12221 ReadM SNP 0021.scaffold00073 1402252 1 G A - ScafM INDEL 0021.scaffold00073 1410534 2 .. GG scaffold12221 ReadM INDEL 0021.scaffold00073 1414357 2 TG .. - ReadM SNP 0021.scaffold00073 1415400 1 T C - ScafM SNP 0021.scaffold00073 1423520 3 CCT ATA scaffold12221 ScafM INDEL 0021.scaffold00073 1423525 3 AGG ... scaffold12221 ScafM SNP 0021.scaffold00073 1423529 1 C A scaffold12221 ScafM SNP 0021.scaffold00073 1423532 1 C G scaffold12221 ScafM INDEL 0021.scaffold00073 1423536 4 TTTT .... scaffold12221 ScafM SNP 0021.scaffold00073 1423542 3 TCT AAA scaffold12221 ScafM INDEL 0021.scaffold00073 1423546 2 TT .. scaffold12221 ScafM INDEL 0021.scaffold00073 1423551 2 AT .. scaffold12221 ScafM SNP 0021.scaffold00073 1440453 1 A G scaffold12221 ScafM SNP 0021.scaffold00073 1440461 1 T A scaffold12221 ScafM SNP 0021.scaffold00073 1440483 1 A G scaffold12221 ScafM SNP 0021.scaffold00073 1440489 1 A G scaffold12221 ScafM SNP 0021.scaffold00073 1440495 1 A G scaffold12221 ScafM SNP 0021.scaffold00073 1443034 1 C T scaffold12221 Both SNP 0021.scaffold00073 1468964 1 G A scaffold12221 ScafM INDEL 0021.scaffold00073 1491904 23 ....................... TAGTAATACAAATAATAAAATTT scaffold2888 ScafM INDEL 0021.scaffold00073 1497072 1 . T scaffold2888 ScafM SNP 0021.scaffold00073 1497076 1 G A scaffold2888 ScafM INDEL 0021.scaffold00073 1554994 1 A . scaffold2888 ScafM SNP 0021.scaffold00073 1567538 2 TA AT scaffold2888 ScafM SNP 0022.scaffold00080 261 1 T C scaffold21549 ScafM SNP 0022.scaffold00080 805 1 T C scaffold21549 ScafM INDEL 0022.scaffold00080 874 1 . T scaffold21549 ScafM SNP 0022.scaffold00080 1658 1 G C scaffold3852 ScafM INDEL 0022.scaffold00080 1664 5 GTTTT ....A scaffold3852 ScafM SNP 0022.scaffold00080 1674 1 T A scaffold3852 ScafM SNP 0022.scaffold00080 1677 1 A C scaffold3852 ScafM SNP 0022.scaffold00080 1680 1 G C scaffold3852 ScafM INDEL 0022.scaffold00080 1710 2 AA .T scaffold3852 ScafM SNP 0022.scaffold00080 1713 1 G T scaffold3852 ScafM SNP 0022.scaffold00080 1721 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 1726 1 C T scaffold3852 ScafM INDEL 0022.scaffold00080 1735 1 . C scaffold3852 ScafM SNP 0022.scaffold00080 1768 1 C T scaffold3852 ScafM SNP 0022.scaffold00080 1780 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 1783 1 C A scaffold3852 ScafM SNP 0022.scaffold00080 1796 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 1803 1 C T scaffold3852 ScafM INDEL 0022.scaffold00080 1822 1 T . scaffold3852 ScafM SNP 0022.scaffold00080 1833 1 C T scaffold3852 ScafM SNP 0022.scaffold00080 1846 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 1849 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 1885 1 A T scaffold3852 ScafM SNP 0022.scaffold00080 1912 1 T C scaffold3852 ScafM SNP 0022.scaffold00080 1928 1 T C scaffold3852 ScafM SNP 0022.scaffold00080 1954 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 1993 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 1997 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2023 1 C A scaffold3852 ScafM SNP 0022.scaffold00080 2041 1 A T scaffold3852 ScafM SNP 0022.scaffold00080 2045 2 TT CC scaffold3852 ScafM SNP 0022.scaffold00080 2061 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2067 1 T G scaffold3852 ScafM SNP 0022.scaffold00080 2071 1 C T scaffold3852 ScafM INDEL 0022.scaffold00080 2116 1 . A scaffold3852 ScafM SNP 0022.scaffold00080 2124 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2147 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2163 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2189 1 G T scaffold3852 ScafM SNP 0022.scaffold00080 2220 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 2230 1 A T scaffold3852 ScafM INDEL 0022.scaffold00080 2237 1 G . scaffold3852 ScafM INDEL 0022.scaffold00080 2243 1 . T scaffold3852 ScafM SNP 0022.scaffold00080 2257 1 A G scaffold3852 ScafM INDEL 0022.scaffold00080 2274 1 . T scaffold3852 ScafM SNP 0022.scaffold00080 2297 1 C T scaffold3852 ScafM SNP 0022.scaffold00080 2302 1 T G scaffold3852 ScafM SNP 0022.scaffold00080 2305 1 G T scaffold3852 ScafM SNP 0022.scaffold00080 2322 1 G C scaffold3852 ScafM SNP 0022.scaffold00080 2334 1 T G scaffold3852 ScafM SNP 0022.scaffold00080 2338 1 G A scaffold3852 ScafM SNP 0022.scaffold00080 2347 1 A G scaffold3852 ScafM SNP 0022.scaffold00080 3808 1 A C scaffold896 ScafM SNP 0022.scaffold00080 3911 1 G T scaffold896 ScafM SNP 0022.scaffold00080 3954 1 G A scaffold896 ScafM INDEL 0022.scaffold00080 3960 1 T . scaffold896 ScafM SNP 0022.scaffold00080 3981 1 C T scaffold896 ScafM SNP 0022.scaffold00080 3985 1 A T scaffold896 ScafM SNP 0022.scaffold00080 4643 1 T G scaffold896 ScafM SNP 0022.scaffold00080 4665 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 4693 2 AA .. scaffold896 ScafM INDEL 0022.scaffold00080 4699 1 A . scaffold896 ScafM SNP 0022.scaffold00080 4705 1 A T scaffold896 ScafM SNP 0022.scaffold00080 4721 1 G A scaffold896 ScafM SNP 0022.scaffold00080 4754 1 G T scaffold896 ScafM SNP 0022.scaffold00080 4777 1 G T scaffold896 ScafM SNP 0022.scaffold00080 4785 1 A G scaffold896 ScafM SNP 0022.scaffold00080 4825 1 G T scaffold896 ScafM SNP 0022.scaffold00080 4839 1 A G scaffold896 ScafM INDEL 0022.scaffold00080 5720 2 .. TT scaffold896 ScafM SNP 0022.scaffold00080 5792 1 T C scaffold896 ScafM SNP 0022.scaffold00080 5799 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 5811 1 T . scaffold896 ScafM SNP 0022.scaffold00080 5838 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 5842 1 . T scaffold896 ScafM SNP 0022.scaffold00080 5856 1 T C scaffold896 ScafM SNP 0022.scaffold00080 5889 1 T G scaffold896 ScafM SNP 0022.scaffold00080 5893 1 C T scaffold896 ScafM SNP 0022.scaffold00080 5901 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 5905 1 . T scaffold896 ScafM SNP 0022.scaffold00080 5954 1 T C scaffold896 ScafM SNP 0022.scaffold00080 5956 1 G A scaffold896 ScafM SNP 0022.scaffold00080 5960 2 TT CA scaffold896 ScafM SNP 0022.scaffold00080 5964 1 A C scaffold896 ScafM SNP 0022.scaffold00080 5982 1 T C scaffold896 ScafM SNP 0022.scaffold00080 5985 1 T A scaffold896 ReadM SNP 0022.scaffold00080 6297 1 G A - ScafM INDEL 0022.scaffold00080 7025 1 A . scaffold896 ScafM SNP 0022.scaffold00080 7033 1 G A scaffold896 ScafM SNP 0022.scaffold00080 7045 2 TA CG scaffold896 ScafM INDEL 0022.scaffold00080 7056 1 A . scaffold896 ScafM SNP 0022.scaffold00080 7062 1 C T scaffold896 ScafM SNP 0022.scaffold00080 7092 1 G C scaffold896 ScafM INDEL 0022.scaffold00080 7097 8 TCAATTCT ........ scaffold896 ScafM SNP 0022.scaffold00080 7140 1 T C scaffold896 ScafM SNP 0022.scaffold00080 7146 1 A G scaffold896 ScafM SNP 0022.scaffold00080 7328 1 T C scaffold896 ScafM SNP 0022.scaffold00080 7346 1 T A scaffold896 ScafM SNP 0022.scaffold00080 7356 1 T C scaffold896 ScafM SNP 0022.scaffold00080 7361 1 C T scaffold896 ScafM SNP 0022.scaffold00080 7366 1 A G scaffold896 ScafM SNP 0022.scaffold00080 7398 1 A T scaffold896 ScafM SNP 0022.scaffold00080 7406 1 C T scaffold896 ScafM SNP 0022.scaffold00080 7436 1 G A scaffold896 ScafM SNP 0022.scaffold00080 7464 1 A G scaffold896 ScafM SNP 0022.scaffold00080 7467 1 A T scaffold896 ScafM INDEL 0022.scaffold00080 7474 2 .. TC scaffold896 ScafM SNP 0022.scaffold00080 7505 1 A T scaffold896 ScafM SNP 0022.scaffold00080 7511 2 CT TC scaffold896 ScafM SNP 0022.scaffold00080 8544 1 G T scaffold32778 ScafM SNP 0022.scaffold00080 8595 1 A G scaffold32778 ScafM SNP 0022.scaffold00080 8599 1 G C scaffold32778 ScafM SNP 0022.scaffold00080 8614 1 C T scaffold32778 ScafM SNP 0022.scaffold00080 8633 1 T C scaffold32778 ScafM SNP 0022.scaffold00080 8644 1 A G scaffold32778 ScafM SNP 0022.scaffold00080 8651 1 A G scaffold32778 ScafM SNP 0022.scaffold00080 8666 1 C A scaffold32778 ScafM SNP 0022.scaffold00080 8692 1 G T scaffold32778 ScafM INDEL 0022.scaffold00080 8707 3 AAA ... scaffold32778 ScafM INDEL 0022.scaffold00080 8712 1 A . scaffold32778 ScafM SNP 0022.scaffold00080 8714 1 A G scaffold32778 ScafM INDEL 0022.scaffold00080 8718 1 A . scaffold32778 ScafM INDEL 0022.scaffold00080 8721 3 TAT ... scaffold32778 ScafM INDEL 0022.scaffold00080 8726 3 TTT ... scaffold32778 ScafM SNP 0022.scaffold00080 8750 2 TA CG scaffold32778 ScafM SNP 0022.scaffold00080 8766 1 A G scaffold32778 ScafM SNP 0022.scaffold00080 8770 1 C G scaffold32778 ScafM INDEL 0022.scaffold00080 8785 3 ..G ATC scaffold32778 ScafM INDEL 0022.scaffold00080 8792 1 . A scaffold32778 ScafM SNP 0022.scaffold00080 8814 1 A G scaffold32778 ScafM INDEL 0022.scaffold00080 8824 1 T . scaffold32778 ScafM SNP 0022.scaffold00080 8863 1 G C scaffold32778 ScafM SNP 0022.scaffold00080 8865 1 G A scaffold32778 ScafM SNP 0022.scaffold00080 8898 2 AG GA scaffold32778 ScafM SNP 0022.scaffold00080 8918 3 CCA GTG scaffold32778 ScafM SNP 0022.scaffold00080 8927 1 A C scaffold32778 ScafM SNP 0022.scaffold00080 8933 1 T C scaffold32778 ScafM SNP 0022.scaffold00080 8938 1 T C scaffold32778 ScafM SNP 0022.scaffold00080 9017 1 C T scaffold32778 ScafM SNP 0022.scaffold00080 9024 1 G A scaffold32778 ScafM SNP 0022.scaffold00080 9029 1 C T scaffold32778 ScafM SNP 0022.scaffold00080 9068 1 C T scaffold32778 ScafM SNP 0022.scaffold00080 9085 1 G A scaffold32778 ScafM SNP 0022.scaffold00080 9094 1 A C scaffold32778 ScafM SNP 0022.scaffold00080 9103 1 A C scaffold32778 ScafM SNP 0022.scaffold00080 9144 1 T C scaffold32778 ScafM SNP 0022.scaffold00080 9156 1 T C scaffold32778 ScafM SNP 0022.scaffold00080 9168 2 AT GC scaffold32778 ScafM SNP 0022.scaffold00080 9172 1 G C scaffold32778 ScafM SNP 0022.scaffold00080 9216 1 G T scaffold32778 ScafM SNP 0022.scaffold00080 9226 1 G A scaffold32778 ScafM SNP 0022.scaffold00080 9239 1 G T scaffold32778 ScafM SNP 0022.scaffold00080 9242 1 A G scaffold32778 ScafM INDEL 0022.scaffold00080 9250 1 T . scaffold32778 ScafM SNP 0022.scaffold00080 9747 1 T A scaffold9341 ScafM SNP 0022.scaffold00080 13143 1 T G scaffold4693 ScafM SNP 0022.scaffold00080 13250 1 C T scaffold4693 ScafM SNP 0022.scaffold00080 13275 1 C T scaffold4693 ScafM SNP 0022.scaffold00080 13436 1 T C scaffold896 ScafM SNP 0022.scaffold00080 13438 1 G A scaffold896 ScafM SNP 0022.scaffold00080 13449 1 C T scaffold896 ScafM SNP 0022.scaffold00080 13468 1 C G scaffold896 ScafM SNP 0022.scaffold00080 13478 1 A T scaffold896 ScafM INDEL 0022.scaffold00080 13494 2 .. AG scaffold896 ScafM SNP 0022.scaffold00080 13499 1 G A scaffold896 ScafM SNP 0022.scaffold00080 13521 1 G A scaffold896 ScafM SNP 0022.scaffold00080 13534 1 A G scaffold896 ScafM SNP 0022.scaffold00080 13539 1 G T scaffold896 ScafM SNP 0022.scaffold00080 13549 1 A T scaffold896 ScafM INDEL 0022.scaffold00080 13617 2 AC .T scaffold896 ScafM INDEL 0022.scaffold00080 13627 1 . A scaffold896 ScafM SNP 0022.scaffold00080 13631 1 A T scaffold896 ScafM SNP 0022.scaffold00080 13644 1 C T scaffold896 ScafM SNP 0022.scaffold00080 14104 1 C T scaffold896 ScafM SNP 0022.scaffold00080 14153 1 T C scaffold896 ScafM SNP 0022.scaffold00080 14191 1 G A scaffold896 ScafM SNP 0022.scaffold00080 14194 1 G A scaffold896 ScafM SNP 0022.scaffold00080 14199 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 14226 17 CATGTGAAGCTTTCTCT ................. scaffold896 ScafM INDEL 0022.scaffold00080 14245 1 C . scaffold896 ScafM SNP 0022.scaffold00080 14287 1 C A scaffold896 ScafM INDEL 0022.scaffold00080 14326 8 ........ TTGATTGT scaffold896 ScafM INDEL 0022.scaffold00080 14355 1 . T scaffold896 ScafM SNP 0022.scaffold00080 14453 1 T G scaffold896 ScafM SNP 0022.scaffold00080 14463 1 G A scaffold896 ScafM SNP 0022.scaffold00080 14466 1 C T scaffold896 ScafM SNP 0022.scaffold00080 14468 1 A T scaffold896 Both SNP 0022.scaffold00080 14714 1 A G scaffold896 Both INDEL 0022.scaffold00080 14759 1 . T scaffold896 Both SNP 0022.scaffold00080 14816 1 G C scaffold896 Both SNP 0022.scaffold00080 14826 1 C A scaffold896 ScafM INDEL 0022.scaffold00080 14876 6 ...... GAGTAT scaffold896 Both SNP 0022.scaffold00080 14983 1 C T scaffold896 Both SNP 0022.scaffold00080 15010 1 C T scaffold896 Both SNP 0022.scaffold00080 15057 1 A G scaffold896 Both SNP 0022.scaffold00080 15201 1 G A scaffold896 Both SNP 0022.scaffold00080 15279 1 C A scaffold896 Both SNP 0022.scaffold00080 15412 1 C T scaffold896 Both SNP 0022.scaffold00080 15559 1 C A scaffold896 Both SNP 0022.scaffold00080 15694 1 C T scaffold896 Both SNP 0022.scaffold00080 15832 1 G A scaffold896 Both SNP 0022.scaffold00080 15846 1 A G scaffold896 Both INDEL 0022.scaffold00080 15850 1 . G scaffold896 Both SNP 0022.scaffold00080 15941 1 A G scaffold896 ScafM INDEL 0022.scaffold00080 16030 14 .............. GCAAGCTTGGTACT scaffold896 ScafM SNP 0022.scaffold00080 16039 1 G A scaffold896 ScafM SNP 0022.scaffold00080 16109 1 T C scaffold896 ReadM SNP 0022.scaffold00080 16790 1 A G - ReadM SNP 0022.scaffold00080 16806 1 A G - ReadM SNP 0022.scaffold00080 19045 1 C A - ReadM SNP 0022.scaffold00080 19066 1 T C - ReadM SNP 0022.scaffold00080 19069 1 G A - ReadM SNP 0022.scaffold00080 19152 1 A T - ReadM INDEL 0022.scaffold00080 20013 1 C . - ReadM SNP 0022.scaffold00080 20507 1 A C - ReadM SNP 0022.scaffold00080 20523 1 A G - ReadM SNP 0022.scaffold00080 20876 1 T A - ReadM INDEL 0022.scaffold00080 21068 1 . C - ReadM SNP 0022.scaffold00080 21084 1 T C - ReadM SNP 0022.scaffold00080 21657 1 A G - ReadM SNP 0022.scaffold00080 21706 1 T G - ReadM SNP 0022.scaffold00080 21742 1 T C - ReadM SNP 0022.scaffold00080 22690 1 T C - ReadM SNP 0022.scaffold00080 22715 1 T C - ReadM SNP 0022.scaffold00080 22731 1 A T - ScafM SNP 0022.scaffold00080 23323 1 T G scaffold896 ScafM SNP 0022.scaffold00080 23352 1 A G scaffold896 ScafM SNP 0022.scaffold00080 23367 1 T G scaffold896 ScafM SNP 0022.scaffold00080 23380 1 G A scaffold896 ScafM SNP 0022.scaffold00080 23391 1 G A scaffold896 ScafM SNP 0022.scaffold00080 23397 1 A G scaffold896 ScafM INDEL 0022.scaffold00080 23411 5 ..... TAAAG scaffold896 ScafM INDEL 0022.scaffold00080 23414 6 ...... TAGCAG scaffold896 ScafM SNP 0022.scaffold00080 23475 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23541 1 G A scaffold896 ScafM SNP 0022.scaffold00080 23579 1 G A scaffold896 ScafM SNP 0022.scaffold00080 23597 1 G C scaffold896 ScafM SNP 0022.scaffold00080 23600 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 23624 1 T . scaffold896 ScafM INDEL 0022.scaffold00080 23656 1 G . scaffold896 ScafM SNP 0022.scaffold00080 23704 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23706 1 T C scaffold896 ScafM SNP 0022.scaffold00080 23710 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23776 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23806 1 A G scaffold896 ScafM SNP 0022.scaffold00080 23841 1 T C scaffold896 ScafM SNP 0022.scaffold00080 23857 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23859 1 T C scaffold896 ScafM SNP 0022.scaffold00080 23930 1 T C scaffold896 ScafM SNP 0022.scaffold00080 23948 1 C T scaffold896 ScafM SNP 0022.scaffold00080 23959 1 T C scaffold896 ReadM SNP 0022.scaffold00080 29251 1 C T - ReadM SNP 0022.scaffold00080 29340 1 A G - ReadM SNP 0022.scaffold00080 29443 1 C T - ReadM SNP 0022.scaffold00080 29513 1 T C - ReadM SNP 0022.scaffold00080 29734 1 C T - ReadM SNP 0022.scaffold00080 29742 1 T C - ReadM SNP 0022.scaffold00080 29920 1 A T - ReadM SNP 0022.scaffold00080 30016 1 T A - ReadM SNP 0022.scaffold00080 30048 1 G T - ReadM INDEL 0022.scaffold00080 30073 1 A . - ReadM SNP 0022.scaffold00080 30194 1 G A - ReadM SNP 0022.scaffold00080 30228 1 C T - ReadM SNP 0022.scaffold00080 30280 1 C T - ReadM SNP 0022.scaffold00080 30288 1 T C - ReadM SNP 0022.scaffold00080 30485 1 C G - ReadM SNP 0022.scaffold00080 30612 1 T G - ReadM SNP 0022.scaffold00080 31013 1 A C - ReadM INDEL 0022.scaffold00080 31060 1 T . - ScafM SNP 0022.scaffold00080 31750 1 G A scaffold896 ScafM SNP 0022.scaffold00080 31799 1 G C scaffold896 ScafM SNP 0022.scaffold00080 31801 1 G A scaffold896 ScafM SNP 0022.scaffold00080 31834 1 T A scaffold896 ScafM SNP 0022.scaffold00080 31841 1 C G scaffold896 ScafM SNP 0022.scaffold00080 31851 1 T G scaffold896 ScafM SNP 0022.scaffold00080 31910 1 T A scaffold896 ScafM SNP 0022.scaffold00080 31987 1 G A scaffold896 ScafM SNP 0022.scaffold00080 32021 1 A G scaffold896 ScafM INDEL 0022.scaffold00080 32050 1 T . scaffold896 Both SNP 0022.scaffold00080 32074 1 C G scaffold896 Both SNP 0022.scaffold00080 32093 1 A C scaffold896 Both SNP 0022.scaffold00080 32214 1 A T scaffold896 Both SNP 0022.scaffold00080 32585 1 A G scaffold896 Both SNP 0022.scaffold00080 32633 1 G T scaffold896 Both SNP 0022.scaffold00080 32679 1 C A scaffold896 Both SNP 0022.scaffold00080 32726 1 T C scaffold896 Both SNP 0022.scaffold00080 33099 1 G T scaffold896 Both SNP 0022.scaffold00080 33106 1 G T scaffold896 Both SNP 0022.scaffold00080 33218 1 G A scaffold896 Both SNP 0022.scaffold00080 33825 1 G C scaffold896 Both SNP 0022.scaffold00080 34161 1 A T scaffold896 Both SNP 0022.scaffold00080 34299 1 C T scaffold896 Both SNP 0022.scaffold00080 34361 1 T C scaffold896 Both SNP 0022.scaffold00080 34497 1 G A scaffold896 Both SNP 0022.scaffold00080 34509 1 A G scaffold896 Both SNP 0022.scaffold00080 34574 1 G C scaffold896 Both SNP 0022.scaffold00080 34618 1 A G scaffold896 Both SNP 0022.scaffold00080 34637 1 T C scaffold896 Both SNP 0022.scaffold00080 34671 1 A G scaffold896 Both SNP 0022.scaffold00080 34680 1 A G scaffold896 Both SNP 0022.scaffold00080 34769 1 A G scaffold896 Both SNP 0022.scaffold00080 34809 1 G C scaffold896 ScafM INDEL 0022.scaffold00080 34822 6 TGATGA ...... scaffold896 ScafM INDEL 0022.scaffold00080 34831 13 CACCCTAAGAGTT ............. scaffold896 ScafM SNP 0022.scaffold00080 34866 1 T A scaffold896 Both SNP 0022.scaffold00080 34883 1 G T scaffold896 ScafM SNP 0022.scaffold00080 35036 1 C T scaffold896 ScafM SNP 0022.scaffold00080 35073 1 A G scaffold896 ScafM SNP 0022.scaffold00080 35077 1 T G scaffold896 ScafM SNP 0022.scaffold00080 35081 1 T C scaffold896 ScafM INDEL 0022.scaffold00080 35093 1 T . scaffold896 ScafM SNP 0022.scaffold00080 35128 1 T G scaffold896 ScafM SNP 0022.scaffold00080 35131 1 A G scaffold896 ScafM SNP 0022.scaffold00080 35134 1 A G scaffold896 ReadM SNP 0022.scaffold00080 35175 1 C T - ReadM SNP 0022.scaffold00080 35200 1 T C - ReadM SNP 0022.scaffold00080 35390 1 G T - ReadM SNP 0022.scaffold00080 35504 1 C T - ReadM SNP 0022.scaffold00080 35536 1 A G - ScafM SNP 0022.scaffold00080 36032 1 T A scaffold896 ScafM SNP 0022.scaffold00080 36089 1 G A scaffold896 ScafM SNP 0022.scaffold00080 36114 1 T A scaffold896 ScafM SNP 0022.scaffold00080 56371 1 A G scaffold896 ScafM SNP 0022.scaffold00080 56396 1 G A scaffold896 ScafM SNP 0022.scaffold00080 56410 2 AG GA scaffold896 ScafM SNP 0022.scaffold00080 56430 1 G A scaffold896 ScafM SNP 0022.scaffold00080 56460 1 A G scaffold896 ScafM SNP 0022.scaffold00080 56468 1 C T scaffold896 ScafM SNP 0022.scaffold00080 56488 1 C G scaffold896 ScafM SNP 0022.scaffold00080 56504 1 C G scaffold896 ScafM SNP 0022.scaffold00080 56529 2 TC CA scaffold896 ScafM INDEL 0022.scaffold00080 56583 15 ............... AAGAAAAACAACCCT scaffold896 ScafM SNP 0022.scaffold00080 56599 1 T G scaffold896 ScafM SNP 0022.scaffold00080 56603 1 C T scaffold896 ScafM SNP 0022.scaffold00080 56634 1 A C scaffold896 ScafM SNP 0022.scaffold00080 56718 1 C A scaffold896 ScafM SNP 0022.scaffold00080 56721 1 T G scaffold896 ScafM SNP 0022.scaffold00080 56747 1 T G scaffold896 ScafM SNP 0022.scaffold00080 56749 1 G C scaffold896 Both SNP 0022.scaffold00080 56772 1 A T scaffold896 Both SNP 0022.scaffold00080 56823 1 C A scaffold896 Both SNP 0022.scaffold00080 56950 1 T C scaffold896 ScafM SNP 0022.scaffold00080 56966 1 T A scaffold896 Both SNP 0022.scaffold00080 56975 1 T C scaffold896 Both SNP 0022.scaffold00080 56977 1 T C scaffold896 Both SNP 0022.scaffold00080 57155 1 A G scaffold896 Both SNP 0022.scaffold00080 57178 1 T A scaffold896 Both SNP 0022.scaffold00080 57195 1 C T scaffold896 ScafM SNP 0022.scaffold00080 57210 1 A T scaffold896 Both SNP 0022.scaffold00080 57221 1 G T scaffold896 Both SNP 0022.scaffold00080 57240 1 T C scaffold896 Both SNP 0022.scaffold00080 57288 1 G A scaffold896 Both SNP 0022.scaffold00080 57317 1 G A scaffold896 Both SNP 0022.scaffold00080 57352 1 T A scaffold896 Both SNP 0022.scaffold00080 57390 1 C T scaffold896 ScafM SNP 0022.scaffold00080 57448 1 T C scaffold896 ScafM SNP 0022.scaffold00080 57640 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 57644 3 GAA ... scaffold896 ScafM INDEL 0022.scaffold00080 57655 2 TT .. scaffold896 ScafM INDEL 0022.scaffold00080 57669 4 .... GATC scaffold896 ScafM SNP 0022.scaffold00080 57680 1 A G scaffold896 Both SNP 0022.scaffold00080 57730 1 C A scaffold896 Both SNP 0022.scaffold00080 57768 1 C T scaffold896 Both SNP 0022.scaffold00080 57784 1 G C scaffold896 ScafM SNP 0022.scaffold00080 58429 1 C T scaffold896 ScafM INDEL 0022.scaffold00080 58505 4 TATG .... scaffold896 ScafM SNP 0022.scaffold00080 60358 2 CG AA scaffold11638 ScafM SNP 0022.scaffold00080 60362 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 60377 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 60398 1 A G scaffold11638 ReadM SNP 0022.scaffold00080 61134 1 C T - ReadM SNP 0022.scaffold00080 61179 1 G A - ReadM SNP 0022.scaffold00080 61198 1 C T - ReadM SNP 0022.scaffold00080 61674 1 C T - ReadM SNP 0022.scaffold00080 61742 1 C T - ReadM SNP 0022.scaffold00080 61765 1 C A - ScafM SNP 0022.scaffold00080 61853 2 AG GA scaffold11638 ScafM SNP 0022.scaffold00080 61865 1 A T scaffold11638 ScafM INDEL 0022.scaffold00080 61874 1 . T scaffold11638 ScafM SNP 0022.scaffold00080 61891 1 A T scaffold11638 ScafM SNP 0022.scaffold00080 61928 1 A G scaffold11638 ScafM INDEL 0022.scaffold00080 61940 1 A . scaffold11638 ScafM SNP 0022.scaffold00080 61956 1 T C scaffold11638 ScafM SNP 0022.scaffold00080 61959 1 T G scaffold11638 ScafM SNP 0022.scaffold00080 61990 1 T C scaffold11638 ReadM SNP 0022.scaffold00080 62187 1 T C - ReadM SNP 0022.scaffold00080 62194 1 G T - ScafM INDEL 0022.scaffold00080 67883 1 A . scaffold9458 ScafM SNP 0022.scaffold00080 67913 1 T G scaffold9458 ScafM SNP 0022.scaffold00080 67919 3 AAG GGA scaffold9458 ScafM SNP 0022.scaffold00080 67926 1 T A scaffold9458 ScafM SNP 0022.scaffold00080 67936 1 C A scaffold9458 ScafM SNP 0022.scaffold00080 67943 1 T G scaffold9458 ScafM SNP 0022.scaffold00080 69645 1 G C scaffold11638 ScafM SNP 0022.scaffold00080 69674 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 69676 2 CA TC scaffold11638 ScafM SNP 0022.scaffold00080 69683 1 G A scaffold11638 ScafM SNP 0022.scaffold00080 69739 1 G A scaffold11638 ScafM SNP 0022.scaffold00080 69841 1 G T scaffold11638 ScafM SNP 0022.scaffold00080 69862 1 T G scaffold11638 ScafM INDEL 0022.scaffold00080 69879 1 . A scaffold11638 ScafM SNP 0022.scaffold00080 69881 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 69939 1 A T scaffold11638 ScafM SNP 0022.scaffold00080 69971 1 T C scaffold11638 Both SNP 0022.scaffold00080 70259 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 70457 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 70481 2 TG GT scaffold11638 ScafM SNP 0022.scaffold00080 70515 1 C G scaffold11638 ScafM SNP 0022.scaffold00080 70557 1 C T scaffold11638 ScafM SNP 0022.scaffold00080 70608 1 A G scaffold11638 ScafM SNP 0022.scaffold00080 70653 1 T A scaffold11638 ScafM SNP 0022.scaffold00080 70710 1 T C scaffold11638 ScafM SNP 0022.scaffold00080 70714 1 C A scaffold11638 ScafM SNP 0022.scaffold00080 71431 1 A T scaffold11638 ScafM SNP 0022.scaffold00080 71534 2 AA GG scaffold11638 ScafM SNP 0022.scaffold00080 71691 1 A G scaffold11638 ScafM INDEL 0022.scaffold00080 71981 18 .................. GACAAGAGTTAGAAAGAG scaffold11638 ScafM INDEL 0022.scaffold00080 71985 1 . C scaffold11638 Both INDEL 0022.scaffold00080 72050 1 A . scaffold11638 ReadM SNP 0022.scaffold00080 72122 1 A T - Both SNP 0022.scaffold00080 72203 1 A C scaffold11638 Both SNP 0022.scaffold00080 72215 1 T C scaffold11638 ScafM INDEL 0022.scaffold00080 72264 1 . A scaffold11638 ReadM SNP 0022.scaffold00080 72369 1 T C - ReadM SNP 0022.scaffold00080 72384 1 T A - ScafM SNP 0022.scaffold00080 72648 1 T C scaffold11638 ReadM SNP 0022.scaffold00080 72764 1 G A - ReadM SNP 0022.scaffold00080 72797 1 C A - Both SNP 0022.scaffold00080 72896 1 C T scaffold11638 ReadM INDEL 0022.scaffold00080 72956 3 TTT ... - ReadM SNP 0022.scaffold00080 73062 2 AT GG - ReadM SNP 0022.scaffold00080 73223 1 T G - ReadM SNP 0022.scaffold00080 73274 1 C T - ReadM SNP 0022.scaffold00080 73383 1 C T - ScafM SNP 0022.scaffold00080 75230 1 G T scaffold11638 ScafM SNP 0022.scaffold00080 75247 1 A G scaffold11638 ScafM INDEL 0022.scaffold00080 75252 1 . G scaffold11638 ScafM SNP 0022.scaffold00080 75308 1 G C scaffold11638 ScafM SNP 0022.scaffold00080 75370 1 A G scaffold11638 ReadM SNP 0022.scaffold00080 98154 1 C G - ReadM SNP 0022.scaffold00080 98288 1 G C - ReadM SNP 0022.scaffold00080 98359 1 A C - ReadM SNP 0022.scaffold00080 98397 1 A G - ScafM INDEL 0023.scaffold00091 56666 1 T . scaffold6550 Both SNP 0023.scaffold00091 69197 1 A T scaffold6550 ScafM INDEL 0023.scaffold00091 74463 1 . T scaffold4576 ScafM SNP 0023.scaffold00091 74465 1 G A scaffold4576 ScafM SNP 0023.scaffold00091 98995 1 A G scaffold4220 ScafM SNP 0023.scaffold00091 99007 1 C T scaffold4220 ScafM SNP 0023.scaffold00091 99031 1 A C scaffold4220 ScafM SNP 0023.scaffold00091 99034 1 T A scaffold4220 ScafM SNP 0023.scaffold00091 99047 1 G C scaffold4220 ScafM SNP 0023.scaffold00091 99051 1 T C scaffold4220 ScafM SNP 0023.scaffold00091 99061 2 AC GA scaffold4220 ScafM INDEL 0023.scaffold00091 99088 2 .. AT scaffold4220 ScafM INDEL 0023.scaffold00091 99126 4 GGAA .... scaffold4220 ScafM SNP 0023.scaffold00091 99136 2 AG GT scaffold4220 ScafM SNP 0023.scaffold00091 99162 1 C A scaffold4220 ScafM SNP 0023.scaffold00091 99165 1 A G scaffold4220 ScafM SNP 0023.scaffold00091 99173 1 C T scaffold4220 ScafM SNP 0023.scaffold00091 99179 1 A T scaffold4220 ScafM SNP 0023.scaffold00091 99190 1 T C scaffold4220 ScafM SNP 0023.scaffold00091 99200 1 G C scaffold4220 ScafM SNP 0023.scaffold00091 99202 1 G A scaffold4220 ScafM SNP 0023.scaffold00091 99223 1 G T scaffold4220 ScafM INDEL 0023.scaffold00091 99229 1 T . scaffold4220 ScafM INDEL 0023.scaffold00091 99233 1 T . scaffold4220 ScafM SNP 0023.scaffold00091 99242 2 TA GG scaffold4220 ScafM SNP 0023.scaffold00091 99248 1 A G scaffold4220 ScafM INDEL 0023.scaffold00091 108477 3 AGC ... scaffold6774 ScafM INDEL 0023.scaffold00091 108484 24 TTATAATTCAGTTTTGTGCTAGAA ........................ scaffold6774 ScafM INDEL 0023.scaffold00091 108509 5 TACCC ..... scaffold6774 ScafM INDEL 0023.scaffold00091 108516 1 A . scaffold6774 ScafM SNP 0023.scaffold00091 139688 1 A T scaffold5921 ScafM SNP 0023.scaffold00091 160194 1 T C scaffold13599 ScafM SNP 0023.scaffold00091 202536 1 A G scaffold1525 ScafM SNP 0023.scaffold00091 220278 1 T A scaffold10275 ScafM SNP 0023.scaffold00091 220312 1 T G scaffold10275 ScafM SNP 0023.scaffold00091 220718 1 T C scaffold10275 ScafM SNP 0023.scaffold00091 220803 1 C T scaffold10275 ScafM SNP 0023.scaffold00091 220876 1 T C scaffold10275 ScafM SNP 0023.scaffold00091 220895 1 A G scaffold10275 ScafM SNP 0023.scaffold00091 220922 1 G A scaffold10275 ScafM SNP 0023.scaffold00091 220950 1 G A scaffold10275 ScafM SNP 0023.scaffold00091 221416 1 G T scaffold10275 ScafM SNP 0023.scaffold00091 221441 1 A G scaffold10275 ScafM INDEL 0023.scaffold00091 233393 3 ... GGA scaffold10275 ScafM INDEL 0023.scaffold00091 233394 1 . A scaffold10275 ScafM INDEL 0023.scaffold00091 233395 3 ... ATA scaffold10275 ScafM INDEL 0023.scaffold00091 233396 5 ..... AAAAA scaffold10275 ScafM INDEL 0023.scaffold00091 233398 4 .... AGAA scaffold10275 ScafM INDEL 0023.scaffold00091 233402 5 ..... GGATA scaffold10275 ScafM SNP 0023.scaffold00091 233404 2 CC AT scaffold10275 ScafM INDEL 0023.scaffold00091 233409 4 .... TAAC scaffold10275 ScafM SNP 0023.scaffold00091 233412 1 C T scaffold10275 ScafM INDEL 0023.scaffold00091 233415 8 ........ ATGAGGAA scaffold10275 ScafM INDEL 0023.scaffold00091 233417 1 . C scaffold10275 ScafM INDEL 0023.scaffold00091 233419 3 ... AAG scaffold10275 ScafM INDEL 0023.scaffold00091 233420 1 . C scaffold10275 ScafM INDEL 0023.scaffold00091 233424 3 ... GTT scaffold10275 ScafM INDEL 0023.scaffold00091 233425 3 ... TCT scaffold10275 ScafM INDEL 0023.scaffold00091 233427 1 . C scaffold10275 ScafM INDEL 0023.scaffold00091 233428 1 . A scaffold10275 ScafM INDEL 0023.scaffold00091 233429 1 . G scaffold10275 ScafM SNP 0023.scaffold00091 233432 1 C A scaffold10275 ScafM SNP 0023.scaffold00091 233435 1 C G scaffold10275 ScafM INDEL 0023.scaffold00091 233437 1 C . scaffold10275 Both SNP 0023.scaffold00091 264863 1 A G scaffold10275 ScafM SNP 0023.scaffold00091 283751 1 A G scaffold22354 ScafM SNP 0023.scaffold00091 283922 1 G A scaffold22354 ReadM INDEL 0023.scaffold00091 302769 3 ... GAA - ReadM SNP 0023.scaffold00091 306515 1 C G - Both INDEL 0023.scaffold00091 310938 1 T . scaffold883 ScafM INDEL 0023.scaffold00091 329905 1 T . scaffold883 ScafM INDEL 0023.scaffold00091 329912 1 T . scaffold883 ScafM INDEL 0023.scaffold00091 332416 2 .. AA scaffold883 ScafM SNP 0023.scaffold00091 337726 1 A C scaffold883 ScafM SNP 0023.scaffold00091 337728 4 TCCC AAAA scaffold883 ScafM SNP 0023.scaffold00091 337735 7 TTCTTTG AAAAAAA scaffold883 ScafM SNP 0023.scaffold00091 337744 2 TT AA scaffold883 ScafM INDEL 0023.scaffold00091 337748 3 CCC ... scaffold883 ScafM INDEL 0023.scaffold00091 339264 1 . T scaffold883 ScafM INDEL 0023.scaffold00091 386040 9 ......... GCCTTTGTC scaffold1644 ScafM INDEL 0023.scaffold00091 386378 14 .............. CGGCATAGTAGCAC scaffold1644 ScafM INDEL 0023.scaffold00091 386948 1 . T scaffold1644 ScafM SNP 0023.scaffold00091 388002 1 T G scaffold1644 ScafM INDEL 0023.scaffold00091 388145 16 ................ TTACATTTTGCCTTTT scaffold1644 ScafM SNP 0023.scaffold00091 388361 1 C T scaffold1644 ScafM SNP 0023.scaffold00091 388414 1 A C scaffold1644 ScafM SNP 0023.scaffold00091 388417 1 G A scaffold1644 ScafM SNP 0023.scaffold00091 388424 1 A C scaffold1644 ScafM SNP 0023.scaffold00091 388434 1 A T scaffold1644 ScafM SNP 0023.scaffold00091 388443 1 T C scaffold1644 ScafM INDEL 0023.scaffold00091 388470 2 GC .. scaffold1644 ScafM SNP 0023.scaffold00091 391292 1 T G scaffold1644 ScafM INDEL 0023.scaffold00091 423258 27 ........................... GGGGGGGGGGGGGGGGGGGGGGGGGGG scaffold1644 ScafM SNP 0023.scaffold00091 423319 1 T G scaffold1644 ScafM INDEL 0023.scaffold00091 437423 1 . A scaffold1644 ScafM SNP 0023.scaffold00091 454980 1 G A scaffold1644 ScafM INDEL 0023.scaffold00091 456842 2 .. GG scaffold1644 ScafM SNP 0023.scaffold00091 462137 2 AT TA scaffold1644 ScafM INDEL 0023.scaffold00091 462155 10 .......... GAAGCAAACA scaffold1644 ScafM INDEL 0023.scaffold00091 462180 14 .............. ATTTTCTTCAATTG scaffold1644 ScafM INDEL 0023.scaffold00091 462183 25 ......................... AAAGCAAATCTGTCAAATTGATTGC scaffold1644 ScafM INDEL 0023.scaffold00091 462185 2 .. AA scaffold1644 ScafM INDEL 0023.scaffold00091 462190 17 ................. TCCCCCCCCCCCCCCAA scaffold1644 ScafM INDEL 0023.scaffold00091 462361 1 . A scaffold1644 ScafM SNP 0023.scaffold00091 465726 1 G A scaffold1644 ScafM INDEL 0023.scaffold00091 465751 8 CTCTCTCA ........ scaffold1644 ScafM SNP 0023.scaffold00091 529876 1 T A scaffold7512 ScafM INDEL 0023.scaffold00091 542105 1 . T scaffold7512 ScafM INDEL 0023.scaffold00091 543836 47 CCGGCGGTATGCCTGGCCTACAGATATGAATGCTTCCCTTCGCCAAA ............................................... scaffold7512 ScafM INDEL 0023.scaffold00091 544730 18 .................. TGTTTTTTTTTTTTTTTT scaffold7512 ScafM SNP 0023.scaffold00091 544733 1 G T scaffold7512 ScafM SNP 0023.scaffold00091 564454 1 T A scaffold24615 ScafM SNP 0023.scaffold00091 564463 1 G A scaffold24615 ScafM SNP 0023.scaffold00091 564467 1 T G scaffold24615 ScafM SNP 0023.scaffold00091 564470 1 T A scaffold24615 ScafM SNP 0023.scaffold00091 564473 3 CAT TCC scaffold24615 ScafM INDEL 0023.scaffold00091 564485 1 . G scaffold24615 ScafM SNP 0023.scaffold00091 564492 4 CATG TCCA scaffold24615 ScafM INDEL 0023.scaffold00091 564500 3 ... AAA scaffold24615 ScafM SNP 0023.scaffold00091 564505 1 G C scaffold24615 ScafM SNP 0023.scaffold00091 564514 1 G A scaffold24615 ScafM INDEL 0023.scaffold00091 564518 2 AG .C scaffold24615 ScafM INDEL 0023.scaffold00091 564523 1 G . scaffold24615 ScafM SNP 0023.scaffold00091 564526 1 A T scaffold24615 ScafM SNP 0023.scaffold00091 564533 1 A T scaffold24615 ScafM INDEL 0023.scaffold00091 564539 1 . A scaffold24615 ScafM SNP 0023.scaffold00091 564548 1 G A scaffold24615 ScafM SNP 0023.scaffold00091 564561 1 C G scaffold24615 ScafM SNP 0023.scaffold00091 564568 1 T C scaffold24615 ScafM SNP 0023.scaffold00091 564648 1 G T scaffold24615 ScafM SNP 0023.scaffold00091 564650 1 A G scaffold24615 ScafM SNP 0023.scaffold00091 567913 2 CT TC scaffold1537 ScafM SNP 0023.scaffold00091 567936 1 G A scaffold1537 ScafM SNP 0023.scaffold00091 567957 1 T C scaffold1537 ScafM SNP 0023.scaffold00091 567961 1 A G scaffold1537 ScafM SNP 0023.scaffold00091 568357 1 A C scaffold1537 ScafM SNP 0023.scaffold00091 568363 1 A C scaffold1537 ScafM SNP 0023.scaffold00091 568371 1 G A scaffold1537 ScafM SNP 0023.scaffold00091 568460 1 A G scaffold1537 ScafM INDEL 0023.scaffold00091 573937 34 .................................. TTTTTGTCTCTTATCATATATTGTGTATACAAAA scaffold1537 ScafM SNP 0023.scaffold00091 575189 1 C T scaffold1537 ScafM INDEL 0023.scaffold00091 575372 1 . T scaffold1537 ScafM SNP 0023.scaffold00091 575379 1 C T scaffold1537 ScafM SNP 0023.scaffold00091 575407 1 G A scaffold1537 ScafM INDEL 0023.scaffold00091 579143 25 CTCCTTCACCATCTCTTCCATAACA ......................... scaffold1537 ScafM SNP 0023.scaffold00091 579192 1 T C scaffold1537 ScafM SNP 0023.scaffold00091 579342 1 T A scaffold1537 ScafM INDEL 0023.scaffold00091 579346 1 . A scaffold1537 ScafM INDEL 0023.scaffold00091 582792 38 ...................................... TAACTTTTCTATTTATTTATTCTTTTTTTCCCTGATTT scaffold1537 ScafM SNP 0023.scaffold00091 583368 1 G A scaffold1537 ScafM SNP 0023.scaffold00091 583386 1 T G scaffold1537 ScafM SNP 0023.scaffold00091 583761 1 T A scaffold1537 ScafM SNP 0023.scaffold00091 584285 1 C T scaffold1537 ScafM SNP 0023.scaffold00091 584368 1 G A scaffold1537 Both INDEL 0023.scaffold00091 585085 1 . T scaffold1537 Both SNP 0023.scaffold00091 588766 1 C G scaffold1537 ScafM INDEL 0023.scaffold00091 589941 21 GTACCATATGCAGTTTAATGA ..................... scaffold1537 ScafM SNP 0023.scaffold00091 589978 1 A C scaffold1537 ScafM SNP 0023.scaffold00091 600952 1 A C scaffold1537 ScafM SNP 0023.scaffold00091 603223 1 T C scaffold1537 ScafM SNP 0023.scaffold00091 603251 1 A G scaffold1537 ScafM SNP 0023.scaffold00091 606502 1 T C scaffold8881 ScafM SNP 0023.scaffold00091 606506 1 G T scaffold8881 ScafM SNP 0023.scaffold00091 606538 1 A G scaffold8881 ScafM SNP 0023.scaffold00091 606563 1 A G scaffold8881 Both INDEL 0023.scaffold00091 609378 1 A . scaffold16691 ScafM SNP 0023.scaffold00091 610193 1 A G scaffold16691 ScafM SNP 0023.scaffold00091 610740 1 C G scaffold16691 ScafM SNP 0023.scaffold00091 610777 1 A G scaffold16691 ScafM SNP 0023.scaffold00091 610789 1 C T scaffold16691 ScafM INDEL 0023.scaffold00091 620134 1 . T scaffold16691 ScafM INDEL 0023.scaffold00091 623480 1 . A scaffold16691 ScafM INDEL 0023.scaffold00091 624084 30 .............................. CCCCCACACACACCCACACACACCCCCCCC scaffold16691 ScafM SNP 0023.scaffold00091 640394 1 A C scaffold18135 ScafM INDEL 0023.scaffold00091 640444 6 CTTACT ...... scaffold18135 ReadM SNP 0023.scaffold00091 646787 1 C T - ScafM SNP 0023.scaffold00091 649899 1 G A scaffold18135 ScafM SNP 0023.scaffold00091 650733 1 G T scaffold18135 ScafM SNP 0023.scaffold00091 650823 1 C T scaffold18135 ScafM SNP 0023.scaffold00091 650877 1 G A scaffold18135 ScafM SNP 0023.scaffold00091 651099 1 A G scaffold18135 ScafM INDEL 0023.scaffold00091 657061 64 ................................................................ GTACCTTAATGTGAAGAGGTACCACGAAAGAGAGAGAGGGGGACTTCCACTACTCCGACTGGAT scaffold18135 ScafM SNP 0023.scaffold00091 673337 1 T C scaffold22016 ReadM SNP 0023.scaffold00091 679098 1 C A - ScafM SNP 0023.scaffold00091 701110 1 T C scaffold8909 ScafM SNP 0023.scaffold00091 701568 1 T C scaffold8909 ScafM SNP 0023.scaffold00091 702064 1 G A scaffold8909 ScafM SNP 0023.scaffold00091 706471 1 C T scaffold8909 ScafM SNP 0023.scaffold00091 706485 1 T G scaffold8909 ScafM SNP 0023.scaffold00091 706502 1 A G scaffold8909 ScafM INDEL 0023.scaffold00091 706513 3 AGA ... scaffold8909 ScafM SNP 0023.scaffold00091 706521 1 A T scaffold8909 ScafM SNP 0023.scaffold00091 706530 1 C T scaffold8909 ScafM SNP 0023.scaffold00091 706534 1 A G scaffold8909 ScafM SNP 0023.scaffold00091 706536 1 C T scaffold8909 ScafM SNP 0023.scaffold00091 707897 1 T C scaffold8909 ScafM SNP 0023.scaffold00091 710197 1 T C scaffold8909 ScafM INDEL 0023.scaffold00091 730401 1 . T scaffold11905 ScafM INDEL 0023.scaffold00091 745271 27 ........................... TCTTTGTTCACCTTTAAATTACGTTTT scaffold11905 ScafM SNP 0023.scaffold00091 745275 1 A G scaffold11905 ScafM SNP 0023.scaffold00091 745280 2 TT AA scaffold11905 ScafM SNP 0023.scaffold00091 745289 1 C T scaffold11905 ScafM SNP 0023.scaffold00091 745296 1 T G scaffold11905 ScafM SNP 0023.scaffold00091 745298 2 TA GG scaffold11905 ScafM SNP 0023.scaffold00091 745322 1 T A scaffold11905 ScafM SNP 0023.scaffold00091 745346 1 A C scaffold11905 ScafM SNP 0023.scaffold00091 781671 1 G A scaffold6425 ScafM SNP 0023.scaffold00091 798970 1 T C scaffold3625 ScafM SNP 0023.scaffold00091 839037 1 T C scaffold3625 ScafM SNP 0023.scaffold00091 839040 1 T C scaffold3625 ScafM INDEL 0023.scaffold00091 839055 8 AAGCAAAA ........ scaffold3625 Both INDEL 0023.scaffold00091 851866 1 A . scaffold3625 ScafM SNP 0024.scaffold00093 1221 1 G A scaffold794 ScafM SNP 0024.scaffold00093 1227 2 TT GG scaffold794 ScafM SNP 0024.scaffold00093 1245 1 A G scaffold794 ScafM INDEL 0024.scaffold00093 1256 1 . T scaffold794 ScafM INDEL 0024.scaffold00093 1266 1 A . scaffold794 ScafM SNP 0024.scaffold00093 1288 1 T C scaffold794 ScafM SNP 0024.scaffold00093 1294 1 A T scaffold794 ScafM SNP 0024.scaffold00093 1296 1 G T scaffold794 ScafM INDEL 0024.scaffold00093 1313 2 .. AT scaffold794 ScafM SNP 0024.scaffold00093 1343 1 A C scaffold794 ScafM SNP 0024.scaffold00093 1378 1 T C scaffold794 ScafM SNP 0024.scaffold00093 1384 2 TA CT scaffold794 ScafM INDEL 0024.scaffold00093 1397 2 TA .. scaffold794 ScafM SNP 0024.scaffold00093 1434 1 A T scaffold794 ScafM SNP 0024.scaffold00093 1436 1 C T scaffold794 ScafM SNP 0024.scaffold00093 1460 1 T C scaffold794 ScafM SNP 0024.scaffold00093 1470 1 G T scaffold794 ScafM SNP 0024.scaffold00093 1512 1 G A scaffold794 ScafM SNP 0024.scaffold00093 1546 1 A G scaffold794 ScafM SNP 0024.scaffold00093 1594 1 C T scaffold794 ScafM SNP 0024.scaffold00093 6011 1 T C scaffold2513 ReadM SNP 0024.scaffold00093 6440 1 A T - ScafM INDEL 0024.scaffold00093 6585 10 .......... CACTTCGAAC scaffold2513 ScafM SNP 0024.scaffold00093 6932 1 C A scaffold2513 ScafM INDEL 0024.scaffold00093 7205 1 . T scaffold2513 ScafM SNP 0024.scaffold00093 7237 1 G A scaffold2513 ReadM INDEL 0024.scaffold00093 8169 1 A . - ReadM SNP 0024.scaffold00093 8729 1 A T - ReadM SNP 0024.scaffold00093 8878 1 G A - ReadM SNP 0024.scaffold00093 8977 1 A G - Both SNP 0024.scaffold00093 9434 1 T C scaffold2513 Both SNP 0024.scaffold00093 9735 1 C T scaffold2513 Both SNP 0024.scaffold00093 9748 1 A G scaffold2513 Both SNP 0024.scaffold00093 9762 1 C T scaffold2513 Both SNP 0024.scaffold00093 9840 1 C T scaffold2513 Both SNP 0024.scaffold00093 9846 1 T G scaffold2513 ReadM SNP 0024.scaffold00093 9891 1 C T - Both SNP 0024.scaffold00093 10409 1 G A scaffold2513 Both SNP 0024.scaffold00093 10893 1 G C scaffold2513 Both SNP 0024.scaffold00093 10938 1 G T scaffold2513 Both INDEL 0024.scaffold00093 11070 1 . A scaffold2513 ReadM SNP 0024.scaffold00093 11246 1 T A - ReadM SNP 0024.scaffold00093 11310 1 T C - Both SNP 0024.scaffold00093 11630 1 A C scaffold2513 Both SNP 0024.scaffold00093 11856 1 G T scaffold2513 ReadM SNP 0024.scaffold00093 12136 1 G A - ReadM SNP 0024.scaffold00093 12169 1 G C - Both SNP 0024.scaffold00093 12242 1 A G scaffold2513 Both SNP 0024.scaffold00093 12716 1 G A scaffold2513 ReadM SNP 0024.scaffold00093 12936 1 C T - ReadM SNP 0024.scaffold00093 12986 1 T G - ReadM SNP 0024.scaffold00093 13103 1 G A - ReadM SNP 0024.scaffold00093 13145 1 G A - ScafM SNP 0024.scaffold00093 14038 1 A T scaffold2513 ScafM SNP 0024.scaffold00093 14071 1 A C scaffold2513 ScafM INDEL 0024.scaffold00093 14216 4 AGAT .... scaffold2513 ScafM SNP 0024.scaffold00093 14346 1 A G scaffold2513 ScafM INDEL 0024.scaffold00093 14368 5 ..... AAAAA scaffold2513 ScafM SNP 0024.scaffold00093 14504 1 G C scaffold2513 ScafM INDEL 0024.scaffold00093 14517 1 . A scaffold2513 ScafM SNP 0024.scaffold00093 15957 1 C T scaffold2513 ScafM SNP 0024.scaffold00093 15988 1 T C scaffold2513 Both SNP 0024.scaffold00093 16518 1 A G scaffold2513 ReadM SNP 0024.scaffold00093 16642 1 T C - Both SNP 0024.scaffold00093 16785 1 C T scaffold2513 Both SNP 0024.scaffold00093 16847 1 G A scaffold2513 Both SNP 0024.scaffold00093 16882 1 G T scaffold2513 Both SNP 0024.scaffold00093 16903 1 G A scaffold2513 ReadM SNP 0024.scaffold00093 17122 1 A T - ReadM SNP 0024.scaffold00093 17160 1 T G - Both SNP 0024.scaffold00093 17270 1 T A scaffold2513 Both SNP 0024.scaffold00093 17293 1 T G scaffold2513 Both SNP 0024.scaffold00093 17409 1 G A scaffold2513 Both SNP 0024.scaffold00093 17456 1 G A scaffold2513 ScafM INDEL 0024.scaffold00093 17518 3 GAA ... scaffold2513 ScafM SNP 0024.scaffold00093 17547 1 A T scaffold2513 ReadM SNP 0024.scaffold00093 17634 1 C G - ReadM SNP 0024.scaffold00093 18034 1 T C - ReadM SNP 0024.scaffold00093 19719 1 G T - ReadM SNP 0024.scaffold00093 19859 1 G A - ReadM INDEL 0024.scaffold00093 20110 1 T . - ReadM SNP 0024.scaffold00093 20399 1 T C - ReadM SNP 0024.scaffold00093 20615 1 T C - ReadM SNP 0024.scaffold00093 21479 1 G A - ReadM SNP 0024.scaffold00093 21517 1 C G - ReadM SNP 0024.scaffold00093 21926 1 A C - ReadM SNP 0024.scaffold00093 22115 1 T C - ReadM SNP 0024.scaffold00093 23040 1 G C - ReadM SNP 0024.scaffold00093 23616 1 A T - ReadM SNP 0024.scaffold00093 23902 1 G A - ReadM SNP 0024.scaffold00093 24010 1 C T - ReadM INDEL 0024.scaffold00093 24362 1 . A - ReadM SNP 0024.scaffold00093 24452 1 C T - ReadM SNP 0024.scaffold00093 24480 1 T C - ReadM SNP 0024.scaffold00093 24537 1 A G - ReadM SNP 0024.scaffold00093 26416 1 A G - ReadM SNP 0024.scaffold00093 26631 1 T C - Both SNP 0024.scaffold00093 27321 1 T C scaffold2513 ScafM SNP 0024.scaffold00093 27344 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 27376 1 A C scaffold2513 ScafM SNP 0024.scaffold00093 27378 1 G A scaffold2513 Both SNP 0024.scaffold00093 27410 1 G C scaffold2513 Both SNP 0024.scaffold00093 27457 1 A G scaffold2513 Both SNP 0024.scaffold00093 27532 1 T C scaffold2513 Both SNP 0024.scaffold00093 27637 1 C A scaffold2513 Both SNP 0024.scaffold00093 27958 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 28200 1 G T scaffold2513 Both SNP 0024.scaffold00093 28381 1 G A scaffold2513 Both SNP 0024.scaffold00093 28429 1 T C scaffold2513 Both SNP 0024.scaffold00093 29038 1 G T scaffold2513 Both SNP 0024.scaffold00093 29292 1 A T scaffold2513 Both SNP 0024.scaffold00093 29317 1 A T scaffold2513 Both SNP 0024.scaffold00093 29319 1 G T scaffold2513 Both SNP 0024.scaffold00093 30099 1 C T scaffold2513 Both INDEL 0024.scaffold00093 30597 1 . T scaffold2513 Both SNP 0024.scaffold00093 31148 1 C T scaffold2513 Both SNP 0024.scaffold00093 31190 1 A G scaffold2513 Both SNP 0024.scaffold00093 31362 1 A C scaffold2513 Both SNP 0024.scaffold00093 31380 1 A C scaffold2513 Both INDEL 0024.scaffold00093 31520 3 ACT ... scaffold2513 Both SNP 0024.scaffold00093 31568 1 C T scaffold2513 Both SNP 0024.scaffold00093 32114 1 C T scaffold2513 Both SNP 0024.scaffold00093 32246 1 G A scaffold2513 Both SNP 0024.scaffold00093 32317 1 C T scaffold2513 Both SNP 0024.scaffold00093 32483 1 C T scaffold2513 Both SNP 0024.scaffold00093 32745 1 T G scaffold2513 Both SNP 0024.scaffold00093 33099 1 A G scaffold2513 ScafM SNP 0024.scaffold00093 33209 2 CT AC scaffold2513 Both SNP 0024.scaffold00093 33241 1 A G scaffold2513 Both SNP 0024.scaffold00093 33304 1 T C scaffold2513 Both SNP 0024.scaffold00093 33470 1 A G scaffold2513 Both SNP 0024.scaffold00093 33501 1 A C scaffold2513 ReadM SNP 0024.scaffold00093 34001 1 T C - ReadM SNP 0024.scaffold00093 34095 1 T G - ScafM SNP 0024.scaffold00093 34406 1 G C scaffold2513 ScafM SNP 0024.scaffold00093 34483 1 T A scaffold2513 ScafM SNP 0024.scaffold00093 34587 1 T A scaffold2513 ScafM SNP 0024.scaffold00093 34658 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 34711 1 C T scaffold2513 ScafM SNP 0024.scaffold00093 34723 1 A G scaffold2513 ScafM SNP 0024.scaffold00093 34775 1 C T scaffold2513 ScafM INDEL 0024.scaffold00093 34778 6 ...... TATCTT scaffold2513 ScafM INDEL 0024.scaffold00093 34779 5 ..... CAATA scaffold2513 ScafM SNP 0024.scaffold00093 34846 1 A C scaffold2513 ScafM SNP 0024.scaffold00093 35178 1 G A scaffold2513 Both INDEL 0024.scaffold00093 35203 1 . T scaffold2513 Both SNP 0024.scaffold00093 35298 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 35494 1 A G scaffold2513 Both SNP 0024.scaffold00093 35645 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 35710 1 T C scaffold2513 ScafM SNP 0024.scaffold00093 35906 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 36146 1 T G scaffold2513 ScafM SNP 0024.scaffold00093 36308 1 G C scaffold35728 ScafM SNP 0024.scaffold00093 36323 1 T A scaffold35728 ReadM SNP 0024.scaffold00093 36358 1 T A - ScafM INDEL 0024.scaffold00093 36421 1 . T scaffold35728 ScafM SNP 0024.scaffold00093 36428 1 C T scaffold35728 ReadM SNP 0024.scaffold00093 36434 1 C A - ScafM SNP 0024.scaffold00093 36446 1 A T scaffold35728 ScafM SNP 0024.scaffold00093 36470 1 A T scaffold35728 ScafM SNP 0024.scaffold00093 36492 1 A C scaffold35728 ScafM INDEL 0024.scaffold00093 36534 1 A . scaffold35728 ScafM INDEL 0024.scaffold00093 36549 12 ............ ACATATTCTACC scaffold35728 ScafM SNP 0024.scaffold00093 36558 1 C T scaffold35728 ScafM SNP 0024.scaffold00093 36586 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36593 1 A G scaffold35728 ScafM SNP 0024.scaffold00093 36618 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36640 1 T C scaffold35728 ScafM SNP 0024.scaffold00093 36645 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36734 1 T C scaffold35728 ScafM SNP 0024.scaffold00093 36753 1 T C scaffold35728 ScafM SNP 0024.scaffold00093 36762 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36841 1 A G scaffold35728 ScafM SNP 0024.scaffold00093 36878 1 T C scaffold35728 ScafM SNP 0024.scaffold00093 36884 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36888 1 C G scaffold35728 ScafM SNP 0024.scaffold00093 36893 1 T G scaffold35728 ScafM SNP 0024.scaffold00093 36924 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36955 1 G A scaffold35728 ScafM SNP 0024.scaffold00093 36991 1 T A scaffold35728 ScafM SNP 0024.scaffold00093 36998 1 T G scaffold35728 ReadM SNP 0024.scaffold00093 38033 1 A G - ReadM SNP 0024.scaffold00093 38481 1 G A - ReadM SNP 0024.scaffold00093 39110 1 C T - ReadM SNP 0024.scaffold00093 39844 1 G T - ReadM SNP 0024.scaffold00093 43021 1 A G - ReadM SNP 0024.scaffold00093 43151 1 G C - ReadM SNP 0024.scaffold00093 43210 1 T C - ReadM SNP 0024.scaffold00093 43231 1 A G - ReadM SNP 0024.scaffold00093 43368 1 C G - ReadM SNP 0024.scaffold00093 43704 1 T C - ReadM SNP 0024.scaffold00093 43720 1 T C - ReadM SNP 0024.scaffold00093 43956 1 G T - ReadM SNP 0024.scaffold00093 44056 1 T C - ReadM SNP 0024.scaffold00093 44088 1 A G - ReadM SNP 0024.scaffold00093 44185 1 G A - ReadM SNP 0024.scaffold00093 44281 1 A G - ReadM SNP 0024.scaffold00093 44491 1 C T - ReadM SNP 0024.scaffold00093 44599 1 T G - ReadM SNP 0024.scaffold00093 44767 1 G C - ReadM SNP 0024.scaffold00093 44790 1 C T - ReadM SNP 0024.scaffold00093 44861 1 T C - ScafM SNP 0024.scaffold00093 46639 1 G T scaffold2513 ScafM SNP 0024.scaffold00093 46814 1 T C scaffold2513 ScafM SNP 0024.scaffold00093 46839 1 C G scaffold2513 ScafM INDEL 0024.scaffold00093 46870 17 ................. GTGGGGGGGTCGGGGGG scaffold2513 ScafM INDEL 0024.scaffold00093 46880 1 . A scaffold2513 ScafM SNP 0024.scaffold00093 46952 1 T C scaffold2513 Both SNP 0024.scaffold00093 47196 1 C T scaffold2513 Both SNP 0024.scaffold00093 47275 1 T C scaffold2513 ScafM INDEL 0024.scaffold00093 47313 8 TCAGATAG ........ scaffold2513 ScafM SNP 0024.scaffold00093 47510 1 G T scaffold2513 Both SNP 0024.scaffold00093 47605 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 47678 1 T C scaffold2513 ScafM SNP 0024.scaffold00093 47696 1 G A scaffold2513 ScafM SNP 0024.scaffold00093 47748 1 T C scaffold2513 ScafM SNP 0024.scaffold00093 47792 1 A G scaffold2513 ScafM SNP 0024.scaffold00093 47899 1 C T scaffold2513 ReadM SNP 0024.scaffold00093 48961 1 C T - ReadM SNP 0024.scaffold00093 49016 1 G A - ReadM SNP 0024.scaffold00093 49250 1 C T - ReadM INDEL 0024.scaffold00093 49280 1 . A - ReadM SNP 0024.scaffold00093 49321 1 G C - ReadM SNP 0024.scaffold00093 50598 1 T C - ScafM SNP 0024.scaffold00093 50788 1 A G scaffold3434 ScafM SNP 0024.scaffold00093 50795 1 T G scaffold3434 ScafM SNP 0024.scaffold00093 50810 1 C A scaffold3434 ScafM SNP 0024.scaffold00093 50815 1 A G scaffold3434 ReadM INDEL 0024.scaffold00093 50853 1 . A - ScafM SNP 0024.scaffold00093 50869 1 A T scaffold3434 ReadM SNP 0024.scaffold00093 50875 1 G A - ScafM INDEL 0024.scaffold00093 50878 2 .. AA scaffold3434 ScafM SNP 0024.scaffold00093 50911 1 C T scaffold3434 ScafM SNP 0024.scaffold00093 50924 1 C T scaffold3434 ScafM SNP 0024.scaffold00093 51244 1 C T scaffold65214 ScafM SNP 0024.scaffold00093 51427 1 G A scaffold65214 ScafM SNP 0024.scaffold00093 51454 1 G A scaffold65214 ScafM SNP 0024.scaffold00093 51718 1 T C scaffold65214 ReadM SNP 0024.scaffold00093 52182 1 T C - ReadM SNP 0024.scaffold00093 52184 1 A G - ReadM SNP 0024.scaffold00093 52193 1 T C - Both INDEL 0024.scaffold00093 52343 3 GAG ... scaffold65214 ScafM INDEL 0024.scaffold00093 52453 7 ....... TATACCA scaffold65214 ReadM SNP 0024.scaffold00093 52454 1 A T - Both INDEL 0024.scaffold00093 53121 1 A . scaffold65214 ScafM INDEL 0024.scaffold00093 53206 7 ....... AAGTTCC scaffold65214 Both SNP 0024.scaffold00093 53412 1 G A scaffold65214 Both SNP 0024.scaffold00093 53645 1 A T scaffold65214 Both SNP 0024.scaffold00093 54045 1 A G scaffold65214 ReadM SNP 0024.scaffold00093 54188 1 T C - Both SNP 0024.scaffold00093 54249 1 G A scaffold65214 Both SNP 0024.scaffold00093 55781 1 C G scaffold65214 Both SNP 0024.scaffold00093 55900 1 A T scaffold65214 ScafM INDEL 0024.scaffold00093 56060 2 TT .. scaffold65214 ReadM SNP 0024.scaffold00093 56536 1 G A - ReadM SNP 0024.scaffold00093 56652 1 T C - ReadM SNP 0024.scaffold00093 56792 1 T C - ScafM SNP 0024.scaffold00093 57078 1 T C scaffold65214 Both SNP 0024.scaffold00093 57082 1 G T scaffold65214 Both SNP 0024.scaffold00093 57167 1 A C scaffold65214 Both SNP 0024.scaffold00093 57536 1 T A scaffold65214 Both SNP 0024.scaffold00093 57555 1 A T scaffold65214 Both SNP 0024.scaffold00093 57851 1 T C scaffold65214 Both SNP 0024.scaffold00093 57962 1 T G scaffold65214 Both SNP 0024.scaffold00093 58014 1 C G scaffold65214 Both SNP 0024.scaffold00093 58177 1 G A scaffold65214 Both SNP 0024.scaffold00093 58184 1 T C scaffold65214 Both SNP 0024.scaffold00093 58986 1 A G scaffold65214 Both SNP 0024.scaffold00093 59610 1 T A scaffold65214 Both SNP 0024.scaffold00093 59876 1 A G scaffold65214 Both SNP 0024.scaffold00093 60168 1 T C scaffold65214 Both SNP 0024.scaffold00093 60189 1 G A scaffold65214 ScafM SNP 0024.scaffold00093 60252 2 AT TC scaffold65214 Both SNP 0024.scaffold00093 60474 1 C T scaffold65214 ScafM INDEL 0024.scaffold00093 60648 1 . A scaffold65214 Both SNP 0024.scaffold00093 60769 1 G A scaffold65214 Both SNP 0024.scaffold00093 61000 1 T C scaffold65214 ScafM INDEL 0024.scaffold00093 61433 2 TT .. scaffold65214 Both SNP 0024.scaffold00093 61651 1 C G scaffold65214 Both SNP 0024.scaffold00093 61919 1 C G scaffold65214 Both SNP 0024.scaffold00093 61962 1 T C scaffold65214 Both SNP 0024.scaffold00093 61968 1 C T scaffold65214 Both SNP 0024.scaffold00093 62791 1 A T scaffold65214 ReadM SNP 0024.scaffold00093 63797 1 A G - ReadM SNP 0024.scaffold00093 64108 1 T A - ReadM SNP 0024.scaffold00093 64428 1 T G - ReadM SNP 0024.scaffold00093 64610 1 A G - ReadM SNP 0024.scaffold00093 64733 1 A G - ReadM SNP 0024.scaffold00093 64839 1 C T - ReadM INDEL 0024.scaffold00093 64875 1 G . - ReadM SNP 0024.scaffold00093 65102 1 T G - ReadM SNP 0024.scaffold00093 65345 1 T C - ReadM SNP 0024.scaffold00093 65930 1 G A - ReadM SNP 0024.scaffold00093 66787 1 C T - ReadM SNP 0024.scaffold00093 68469 1 T C - ReadM SNP 0024.scaffold00093 69046 1 G A - ReadM SNP 0024.scaffold00093 69254 1 C T - ReadM SNP 0024.scaffold00093 69380 1 G A - ReadM SNP 0024.scaffold00093 70129 1 C T - ReadM SNP 0024.scaffold00093 70131 1 G A - ReadM SNP 0024.scaffold00093 70620 2 GG TT - ReadM SNP 0024.scaffold00093 70624 1 G A - ReadM SNP 0024.scaffold00093 70708 1 A G - ReadM SNP 0024.scaffold00093 70778 1 C G - ReadM SNP 0024.scaffold00093 71032 1 G C - ReadM SNP 0024.scaffold00093 71239 1 T G - ReadM SNP 0024.scaffold00093 71394 1 G A - ReadM SNP 0024.scaffold00093 71506 1 C T - ReadM SNP 0024.scaffold00093 71792 1 G T - ReadM SNP 0024.scaffold00093 72016 1 C G - ReadM SNP 0024.scaffold00093 72211 1 T C - ReadM SNP 0024.scaffold00093 72418 1 G A - ReadM SNP 0024.scaffold00093 72541 1 T G - ReadM SNP 0024.scaffold00093 72612 1 G A - ReadM SNP 0024.scaffold00093 72655 1 G T - ReadM INDEL 0024.scaffold00093 72745 1 . A - ReadM SNP 0024.scaffold00093 72888 1 C T - ReadM SNP 0024.scaffold00093 72940 1 G T - ReadM SNP 0024.scaffold00093 72950 1 G A - ReadM SNP 0024.scaffold00093 73031 1 G A - ReadM SNP 0024.scaffold00093 73213 1 G A - ReadM SNP 0024.scaffold00093 73217 1 C A - ReadM INDEL 0024.scaffold00093 73364 1 . C - ReadM SNP 0024.scaffold00093 73442 1 C T - ReadM SNP 0024.scaffold00093 73461 1 G A - ReadM SNP 0024.scaffold00093 73556 1 T C - ReadM SNP 0024.scaffold00093 73689 1 T A - ReadM SNP 0024.scaffold00093 73698 1 G C - ReadM SNP 0024.scaffold00093 74916 1 C T - ReadM SNP 0024.scaffold00093 74937 1 G C - ReadM INDEL 0024.scaffold00093 75239 1 C . - ReadM SNP 0024.scaffold00093 75295 1 A G - ReadM SNP 0024.scaffold00093 75319 1 G A - ReadM SNP 0024.scaffold00093 75474 1 C T - ReadM SNP 0024.scaffold00093 75538 1 G A - ReadM SNP 0024.scaffold00093 75635 1 A G - ReadM SNP 0024.scaffold00093 75720 1 T C - ReadM INDEL 0024.scaffold00093 75806 2 TC .. - ReadM SNP 0024.scaffold00093 75939 1 G A - ReadM SNP 0024.scaffold00093 76328 1 C T - ReadM SNP 0024.scaffold00093 76354 1 A G - Both SNP 0024.scaffold00093 76598 1 G A scaffold26911 Both SNP 0024.scaffold00093 76676 1 T A scaffold26911 ScafM INDEL 0024.scaffold00093 76823 3 TTT ... scaffold26911 ScafM INDEL 0024.scaffold00093 76844 1 C . scaffold26911 ScafM SNP 0024.scaffold00093 76851 1 T A scaffold26911 Both SNP 0024.scaffold00093 76896 1 C A scaffold26911 ScafM INDEL 0024.scaffold00093 77067 1 A . scaffold26911 Both SNP 0024.scaffold00093 77517 1 T C scaffold26911 ScafM SNP 0024.scaffold00093 77629 1 G A scaffold26911 ScafM INDEL 0024.scaffold00093 77801 1 . A scaffold26911 ScafM SNP 0024.scaffold00093 77820 1 G C scaffold26911 ScafM SNP 0024.scaffold00093 77843 1 T C scaffold26911 ScafM SNP 0024.scaffold00093 77860 1 T A scaffold26911 ScafM SNP 0024.scaffold00093 77892 1 G A scaffold26911 ScafM SNP 0024.scaffold00093 77943 1 A T scaffold26911 ReadM SNP 0024.scaffold00093 78074 1 T C - ReadM SNP 0024.scaffold00093 78140 1 C A - ReadM SNP 0024.scaffold00093 78468 1 T C - ScafM INDEL 0024.scaffold00093 78982 8 ........ CTTTTTTT scaffold26911 Both SNP 0024.scaffold00093 79128 1 A C scaffold26911 Both INDEL 0024.scaffold00093 79187 1 A . scaffold26911 Both INDEL 0024.scaffold00093 79307 1 A . scaffold26911 Both SNP 0024.scaffold00093 79349 1 A C scaffold26911 Both SNP 0024.scaffold00093 79582 1 T G scaffold26911 Both SNP 0024.scaffold00093 79610 1 C A scaffold26911 Both INDEL 0024.scaffold00093 79640 1 C . scaffold26911 Both SNP 0024.scaffold00093 79686 1 T C scaffold26911 Both SNP 0024.scaffold00093 79725 1 C A scaffold26911 ScafM SNP 0024.scaffold00093 79791 1 C A scaffold26911 ScafM INDEL 0024.scaffold00093 79796 1 . T scaffold26911 Both SNP 0024.scaffold00093 79938 1 G T scaffold26911 Both SNP 0024.scaffold00093 79986 1 G A scaffold26911 Both SNP 0024.scaffold00093 80151 1 T C scaffold26911 Both SNP 0024.scaffold00093 80267 1 T A scaffold26911 Both SNP 0024.scaffold00093 80271 1 T C scaffold26911 Both SNP 0024.scaffold00093 80425 1 G A scaffold26911 Both SNP 0024.scaffold00093 80658 1 T C scaffold26911 Both SNP 0024.scaffold00093 80704 1 C T scaffold26911 Both SNP 0024.scaffold00093 80714 1 G T scaffold26911 ReadM SNP 0024.scaffold00093 81029 1 G A - ReadM SNP 0024.scaffold00093 81425 1 G A - ReadM SNP 0024.scaffold00093 81532 1 T C - ReadM SNP 0024.scaffold00093 81659 1 C T - ReadM SNP 0024.scaffold00093 81704 1 A G - ReadM SNP 0024.scaffold00093 81987 1 T A - ReadM SNP 0024.scaffold00093 82169 1 A G - ReadM SNP 0024.scaffold00093 82181 1 T C - ReadM SNP 0024.scaffold00093 82347 1 G A - ReadM SNP 0024.scaffold00093 82405 1 T C - ReadM SNP 0024.scaffold00093 82455 1 A T - ReadM SNP 0024.scaffold00093 82594 1 G T - ReadM SNP 0024.scaffold00093 82605 1 T G - ReadM SNP 0024.scaffold00093 82958 1 T C - ReadM SNP 0024.scaffold00093 83110 1 C T - ReadM SNP 0024.scaffold00093 83288 1 G A - ReadM SNP 0024.scaffold00093 83478 1 G A - ReadM SNP 0024.scaffold00093 83640 1 C A - ReadM SNP 0024.scaffold00093 83647 1 A G - ReadM SNP 0024.scaffold00093 83733 1 G T - ReadM SNP 0024.scaffold00093 84284 1 G A - ReadM SNP 0024.scaffold00093 84438 1 G A - ReadM SNP 0024.scaffold00093 84488 1 A T - ReadM SNP 0024.scaffold00093 84772 1 G A - ReadM SNP 0024.scaffold00093 84963 1 C A - ReadM SNP 0024.scaffold00093 85048 1 A G - ReadM SNP 0024.scaffold00093 85248 1 A G - ReadM SNP 0024.scaffold00093 85389 1 T C - ReadM SNP 0024.scaffold00093 86067 1 T C - Both SNP 0024.scaffold00093 86134 1 T A scaffold26911 Both SNP 0024.scaffold00093 86146 1 C T scaffold26911 Both SNP 0024.scaffold00093 86237 1 A T scaffold26911 Both SNP 0024.scaffold00093 86293 1 A T scaffold26911 Both SNP 0024.scaffold00093 86331 1 G A scaffold26911 Both SNP 0024.scaffold00093 86708 1 C T scaffold26911 Both SNP 0024.scaffold00093 86778 1 T C scaffold26911 Both SNP 0024.scaffold00093 86877 1 C T scaffold26911 Both SNP 0024.scaffold00093 86986 1 T C scaffold26911 ReadM SNP 0024.scaffold00093 87150 1 G C - ReadM SNP 0024.scaffold00093 87172 1 T C - ReadM SNP 0024.scaffold00093 87378 1 A C - ReadM SNP 0024.scaffold00093 93132 1 T A - ReadM SNP 0024.scaffold00093 93321 1 A G - ReadM SNP 0024.scaffold00093 93343 1 A G - Both SNP 0024.scaffold00093 93863 1 T G scaffold459 Both SNP 0024.scaffold00093 93939 1 A G scaffold459 ScafM SNP 0024.scaffold00093 93999 1 G A scaffold459 Both SNP 0024.scaffold00093 94290 1 T C scaffold459 ScafM SNP 0024.scaffold00093 94558 1 T C scaffold459 ScafM SNP 0024.scaffold00093 94674 1 T C scaffold459 ReadM INDEL 0024.scaffold00093 96226 1 . G - ReadM SNP 0024.scaffold00093 96236 1 C G - ReadM SNP 0024.scaffold00093 96704 1 T C - ReadM SNP 0024.scaffold00093 96736 1 C T - Both SNP 0024.scaffold00093 96830 1 T C scaffold459 ReadM SNP 0024.scaffold00093 96993 1 T A - Both SNP 0024.scaffold00093 97010 1 G A scaffold459 Both SNP 0024.scaffold00093 97034 1 A G scaffold459 ReadM SNP 0024.scaffold00093 97098 1 C T - ReadM SNP 0024.scaffold00093 97154 1 A G - ReadM SNP 0024.scaffold00093 97190 1 T C - ReadM SNP 0024.scaffold00093 97699 1 T G - ReadM SNP 0024.scaffold00093 97723 1 G T - ReadM SNP 0024.scaffold00093 97833 1 A T - ReadM SNP 0024.scaffold00093 97877 1 A G - ReadM SNP 0024.scaffold00093 98067 1 T C - ReadM SNP 0024.scaffold00093 98498 1 C G - ReadM SNP 0024.scaffold00093 98740 1 G A - ReadM SNP 0024.scaffold00093 98778 1 T C - ReadM SNP 0024.scaffold00093 98838 1 G A - ReadM SNP 0024.scaffold00093 98882 1 C T - ReadM SNP 0024.scaffold00093 100108 1 T C - ReadM INDEL 0024.scaffold00093 100174 1 C . - ReadM SNP 0024.scaffold00093 100192 1 C T - ReadM SNP 0024.scaffold00093 100463 1 A G - ReadM SNP 0024.scaffold00093 100526 1 A G - ReadM SNP 0024.scaffold00093 100650 1 G A - ReadM SNP 0024.scaffold00093 100690 1 T C - ReadM SNP 0024.scaffold00093 100716 1 C A - Both INDEL 0024.scaffold00093 100789 1 T . scaffold459 Both SNP 0024.scaffold00093 100871 1 C A scaffold459 ReadM SNP 0024.scaffold00093 101131 1 G A - ReadM SNP 0024.scaffold00093 101470 1 T C - ReadM SNP 0024.scaffold00093 101996 1 A T - ReadM SNP 0024.scaffold00093 102149 1 G T - Both SNP 0024.scaffold00093 104401 1 G T scaffold459 ReadM SNP 0024.scaffold00093 104409 1 G A - ReadM SNP 0024.scaffold00093 104455 1 C T - ReadM SNP 0024.scaffold00093 104783 1 G A - ReadM SNP 0024.scaffold00093 104799 1 A T - ReadM SNP 0024.scaffold00093 104838 1 A G - ReadM SNP 0024.scaffold00093 104866 1 C A - ReadM SNP 0024.scaffold00093 104914 1 G T - ReadM SNP 0024.scaffold00093 105058 1 C T - ReadM SNP 0024.scaffold00093 105233 1 A G - ReadM SNP 0024.scaffold00093 105380 1 G A - ReadM SNP 0024.scaffold00093 105597 1 A G - ReadM INDEL 0024.scaffold00093 105715 1 A . - ReadM SNP 0024.scaffold00093 105890 1 A T - ReadM SNP 0024.scaffold00093 105938 1 T A - ReadM SNP 0024.scaffold00093 106059 1 T C - ReadM SNP 0024.scaffold00093 106359 1 A G - ReadM SNP 0024.scaffold00093 106398 1 G A - ReadM SNP 0024.scaffold00093 108148 1 C T - ReadM SNP 0024.scaffold00093 108245 1 T G - ReadM SNP 0024.scaffold00093 108603 1 A C - ReadM SNP 0024.scaffold00093 108778 1 T C - ReadM SNP 0024.scaffold00093 108922 1 G T - ReadM SNP 0024.scaffold00093 108970 1 T A - ReadM SNP 0024.scaffold00093 109162 1 G C - ReadM INDEL 0024.scaffold00093 109173 1 C . - ReadM SNP 0024.scaffold00093 109264 1 G A - ReadM SNP 0024.scaffold00093 109310 1 C G - Both SNP 0024.scaffold00093 109340 1 T A scaffold459 ScafM INDEL 0024.scaffold00093 109375 2 .. TT scaffold459 ScafM INDEL 0024.scaffold00093 109387 1 . A scaffold459 ReadM SNP 0024.scaffold00093 109491 1 G A - ReadM SNP 0024.scaffold00093 109530 1 A G - ReadM SNP 0024.scaffold00093 109575 1 T C - Both SNP 0024.scaffold00093 110236 1 C T scaffold459 ScafM INDEL 0024.scaffold00093 110356 7 ....... ACTCTAT scaffold459 Both SNP 0024.scaffold00093 110401 1 C G scaffold459 Both SNP 0024.scaffold00093 111312 1 A T scaffold459 ReadM SNP 0024.scaffold00093 111601 1 T C - Both SNP 0024.scaffold00093 111623 1 G C scaffold459 Both SNP 0024.scaffold00093 111760 1 C T scaffold459 Both SNP 0024.scaffold00093 112003 1 C A scaffold459 Both SNP 0024.scaffold00093 112058 1 A G scaffold459 Both SNP 0024.scaffold00093 112147 1 T A scaffold459 Both SNP 0024.scaffold00093 112500 1 T G scaffold459 Both SNP 0024.scaffold00093 112694 1 A C scaffold459 Both INDEL 0024.scaffold00093 112901 1 . T scaffold459 Both INDEL 0024.scaffold00093 113571 1 A . scaffold459 Both SNP 0024.scaffold00093 113896 1 C T scaffold459 Both SNP 0024.scaffold00093 113919 1 T A scaffold459 Both SNP 0024.scaffold00093 115007 1 G A scaffold459 Both SNP 0024.scaffold00093 115376 1 A T scaffold459 Both SNP 0024.scaffold00093 115486 1 G A scaffold459 Both SNP 0024.scaffold00093 115708 1 T C scaffold459 ScafM INDEL 0024.scaffold00093 115726 3 ... GAG scaffold459 Both SNP 0024.scaffold00093 115829 1 G T scaffold459 ScafM SNP 0024.scaffold00093 116122 2 CT TC scaffold459 Both SNP 0024.scaffold00093 116443 1 A T scaffold459 Both SNP 0024.scaffold00093 117010 1 T C scaffold459 ReadM SNP 0024.scaffold00093 117412 1 A G - Both SNP 0024.scaffold00093 117549 1 T A scaffold459 ReadM SNP 0024.scaffold00093 117620 1 A C - ReadM SNP 0024.scaffold00093 117666 1 T C - ReadM SNP 0024.scaffold00093 117675 1 C T - ReadM SNP 0024.scaffold00093 117724 1 C A - ReadM INDEL 0024.scaffold00093 117750 1 G . - ScafM SNP 0024.scaffold00093 118017 1 C T scaffold459 ScafM SNP 0024.scaffold00093 118022 1 G A scaffold459 Both SNP 0024.scaffold00093 118221 1 T C scaffold459 ReadM SNP 0024.scaffold00093 118736 1 A G - ReadM INDEL 0024.scaffold00093 118752 1 . A - ReadM INDEL 0024.scaffold00093 119029 1 A . - ReadM SNP 0024.scaffold00093 119308 1 A C - ReadM SNP 0024.scaffold00093 119542 1 T C - ReadM SNP 0024.scaffold00093 120217 1 C T - ReadM SNP 0024.scaffold00093 120272 1 T G - ReadM SNP 0024.scaffold00093 120275 1 T C - ReadM SNP 0024.scaffold00093 120368 1 C A - ReadM SNP 0024.scaffold00093 120411 1 T C - ScafM INDEL 0024.scaffold00093 120675 1 . A scaffold459 ScafM SNP 0024.scaffold00093 120696 1 G A scaffold459 ScafM SNP 0024.scaffold00093 121219 1 A C scaffold459 ScafM SNP 0024.scaffold00093 121381 1 C T scaffold459 ScafM SNP 0024.scaffold00093 121595 1 C T scaffold459 ScafM INDEL 0024.scaffold00093 121609 48 GCTGAAGCAGATGGGAGCAACAGTGAGGAATGGACATGGTTATAAGAA ................................................ scaffold459 ScafM INDEL 0024.scaffold00093 121660 26 GAAGCTGAAGGATGAAAGAGAGAAAG .......................... scaffold459 Both SNP 0024.scaffold00093 121762 1 G T scaffold459 Both SNP 0024.scaffold00093 121840 1 A G scaffold459 ScafM SNP 0024.scaffold00093 121980 1 G C scaffold459 ReadM SNP 0024.scaffold00093 122052 1 C T - ReadM SNP 0024.scaffold00093 122171 1 T A - Both INDEL 0024.scaffold00093 122321 3 CTT ... scaffold459 ReadM SNP 0024.scaffold00093 122613 1 C A - ReadM SNP 0024.scaffold00093 122635 1 A T - Both SNP 0024.scaffold00093 122985 1 A G scaffold459 Both SNP 0024.scaffold00093 123012 1 C T scaffold459 Both SNP 0024.scaffold00093 123108 1 G A scaffold459 Both INDEL 0024.scaffold00093 123139 1 A . scaffold459 ReadM SNP 0024.scaffold00093 123568 1 C T - ReadM SNP 0024.scaffold00093 123648 1 C T - ReadM INDEL 0024.scaffold00093 124094 3 ... AAG - ReadM SNP 0024.scaffold00093 124192 1 G T - ReadM SNP 0024.scaffold00093 124307 1 G A - ReadM SNP 0024.scaffold00093 124400 1 C T - ReadM INDEL 0024.scaffold00093 124489 1 . A - ReadM INDEL 0024.scaffold00093 124646 1 . A - ScafM SNP 0024.scaffold00093 124925 1 T G scaffold459 Both SNP 0024.scaffold00093 124996 1 G A scaffold459 Both SNP 0024.scaffold00093 125021 1 A G scaffold459 ScafM INDEL 0024.scaffold00093 125068 7 ....... GGAAGGA scaffold459 ScafM INDEL 0024.scaffold00093 125093 1 . G scaffold459 Both SNP 0024.scaffold00093 125183 2 AA GT scaffold459 Both SNP 0024.scaffold00093 125250 1 A G scaffold459 Both SNP 0024.scaffold00093 125282 1 A G scaffold459 Both SNP 0024.scaffold00093 125303 1 A G scaffold459 ScafM INDEL 0024.scaffold00093 125350 2 TG .. scaffold459 ScafM INDEL 0024.scaffold00093 125354 4 AGGG .... scaffold459 ScafM INDEL 0024.scaffold00093 125369 3 ... GGG scaffold459 ScafM SNP 0024.scaffold00093 125370 1 T G scaffold459 ScafM INDEL 0024.scaffold00093 125380 4 .... GTGG scaffold459 ScafM INDEL 0024.scaffold00093 125464 1 A . scaffold459 Both SNP 0024.scaffold00093 126027 1 C A scaffold459 Both SNP 0024.scaffold00093 126280 1 A T scaffold459 Both SNP 0024.scaffold00093 126309 1 G A scaffold459 ReadM SNP 0024.scaffold00093 126473 1 A G - ReadM SNP 0024.scaffold00093 126614 1 G A - ReadM SNP 0024.scaffold00093 126650 1 G T - ReadM SNP 0024.scaffold00093 126905 1 G A - ReadM INDEL 0024.scaffold00093 127244 1 C . - ReadM SNP 0024.scaffold00093 127536 1 A G - Both SNP 0024.scaffold00093 127712 1 T G scaffold459 Both SNP 0024.scaffold00093 127944 1 C T scaffold459 ScafM INDEL 0024.scaffold00093 127953 4 .... AAAG scaffold459 ReadM INDEL 0024.scaffold00093 128092 2 .. TA - ReadM SNP 0024.scaffold00093 128187 2 AA GG - Both INDEL 0024.scaffold00093 128261 1 T . scaffold459 ReadM SNP 0024.scaffold00093 128401 1 C T - Both SNP 0024.scaffold00093 128439 1 A G scaffold459 ReadM INDEL 0024.scaffold00093 128664 1 . C - ReadM SNP 0024.scaffold00093 128698 1 A C - ReadM INDEL 0024.scaffold00093 128759 2 .. AT - Both INDEL 0024.scaffold00093 129068 1 . C scaffold459 Both SNP 0024.scaffold00093 129350 1 C T scaffold459 Both SNP 0024.scaffold00093 129414 1 G A scaffold459 ReadM INDEL 0024.scaffold00093 129801 1 T . - Both INDEL 0024.scaffold00093 130017 1 T . scaffold459 Both SNP 0024.scaffold00093 130155 1 C T scaffold459 Both SNP 0024.scaffold00093 130190 1 T G scaffold459 Both SNP 0024.scaffold00093 130284 1 G A scaffold459 Both SNP 0024.scaffold00093 130303 1 G A scaffold459 ReadM SNP 0024.scaffold00093 130382 1 A G - ReadM SNP 0024.scaffold00093 130406 1 C T - ReadM INDEL 0024.scaffold00093 130507 1 . G - Both SNP 0024.scaffold00093 130614 1 G A scaffold459 Both INDEL 0024.scaffold00093 130804 1 A . scaffold459 ReadM INDEL 0024.scaffold00093 131179 1 T . - ReadM SNP 0024.scaffold00093 131484 1 T C - ReadM SNP 0024.scaffold00093 131500 1 T C - ReadM SNP 0024.scaffold00093 131537 1 G C - ReadM SNP 0024.scaffold00093 131541 1 C A - ReadM SNP 0024.scaffold00093 131631 1 A C - ReadM SNP 0024.scaffold00093 131761 1 A G - ReadM SNP 0024.scaffold00093 131836 1 G T - ReadM SNP 0024.scaffold00093 132332 1 G T - ReadM SNP 0024.scaffold00093 132439 1 C T - ReadM SNP 0024.scaffold00093 132491 1 G A - ReadM SNP 0024.scaffold00093 132901 1 C A - ReadM SNP 0024.scaffold00093 132957 1 T G - ReadM SNP 0024.scaffold00093 132961 1 G A - ReadM SNP 0024.scaffold00093 133374 1 T A - ReadM SNP 0024.scaffold00093 133385 1 C T - ReadM SNP 0024.scaffold00093 133473 1 A G - ReadM SNP 0024.scaffold00093 133687 1 T G - ReadM SNP 0024.scaffold00093 133709 1 A T - ReadM SNP 0024.scaffold00093 133778 1 G A - ReadM SNP 0024.scaffold00093 133970 1 C A - ReadM SNP 0024.scaffold00093 134037 1 C T - ReadM SNP 0024.scaffold00093 134090 1 T C - ReadM SNP 0024.scaffold00093 134219 1 G T - ReadM SNP 0024.scaffold00093 134869 1 T C - ReadM SNP 0024.scaffold00093 134923 1 T G - ReadM SNP 0024.scaffold00093 135129 1 G C - ReadM SNP 0024.scaffold00093 135272 1 A G - ReadM INDEL 0024.scaffold00093 135334 1 . C - ReadM SNP 0024.scaffold00093 135642 1 C T - ReadM SNP 0024.scaffold00093 135658 1 C T - ReadM SNP 0024.scaffold00093 135672 1 A C - ReadM SNP 0024.scaffold00093 135700 1 C T - ReadM SNP 0024.scaffold00093 135729 1 A G - ReadM SNP 0024.scaffold00093 135793 1 C T - ReadM SNP 0024.scaffold00093 135802 1 T G - ReadM SNP 0024.scaffold00093 135943 1 C T - ReadM SNP 0024.scaffold00093 136022 1 C T - ReadM SNP 0024.scaffold00093 136279 1 C T - ReadM SNP 0024.scaffold00093 136311 1 T G - ReadM SNP 0024.scaffold00093 136441 1 A G - ReadM SNP 0024.scaffold00093 136559 1 A G - ReadM SNP 0024.scaffold00093 136605 1 C T - ReadM SNP 0024.scaffold00093 136634 1 A G - ReadM SNP 0024.scaffold00093 136645 1 G T - ReadM SNP 0024.scaffold00093 136660 1 T C - ReadM SNP 0024.scaffold00093 136829 1 C T - ReadM SNP 0024.scaffold00093 136871 1 A G - ReadM SNP 0024.scaffold00093 137038 1 C G - ReadM SNP 0024.scaffold00093 137087 1 C T - ReadM SNP 0024.scaffold00093 137108 1 C A - ReadM SNP 0024.scaffold00093 137538 1 G A - ReadM SNP 0024.scaffold00093 137604 1 C T - ReadM SNP 0024.scaffold00093 137903 1 T C - ReadM SNP 0024.scaffold00093 138028 1 G C - Both SNP 0024.scaffold00093 138236 1 T C scaffold459 ReadM SNP 0024.scaffold00093 138416 1 G A - Both INDEL 0024.scaffold00093 138454 1 . T scaffold459 Both SNP 0024.scaffold00093 138470 1 A T scaffold459 Both SNP 0024.scaffold00093 138484 1 G A scaffold459 Both INDEL 0024.scaffold00093 138600 1 C . scaffold459 Both SNP 0024.scaffold00093 138627 1 C A scaffold459 Both SNP 0024.scaffold00093 138678 1 C A scaffold459 ScafM SNP 0024.scaffold00093 138691 2 AT TC scaffold459 Both SNP 0024.scaffold00093 139145 1 A G scaffold459 Both INDEL 0024.scaffold00093 139223 2 TT .. scaffold459 Both SNP 0024.scaffold00093 139288 1 T G scaffold459 Both INDEL 0024.scaffold00093 139486 1 A . scaffold459 Both SNP 0024.scaffold00093 139710 1 A G scaffold459 ReadM SNP 0024.scaffold00093 140361 1 T C - ReadM SNP 0024.scaffold00093 140479 1 C T - ReadM SNP 0024.scaffold00093 140557 1 C T - ReadM SNP 0024.scaffold00093 140777 1 T C - ReadM SNP 0024.scaffold00093 140884 1 A C - ReadM SNP 0024.scaffold00093 140928 1 G A - ReadM SNP 0024.scaffold00093 141149 1 T C - ReadM SNP 0024.scaffold00093 141352 1 G A - ReadM SNP 0024.scaffold00093 141493 1 G A - ReadM SNP 0024.scaffold00093 141881 1 C T - ReadM INDEL 0024.scaffold00093 141944 2 .. AA - ReadM SNP 0024.scaffold00093 142180 1 G A - ReadM SNP 0024.scaffold00093 142297 1 A C - ReadM SNP 0024.scaffold00093 142500 1 A G - ReadM SNP 0024.scaffold00093 142718 1 A C - ReadM SNP 0024.scaffold00093 142809 1 C A - ReadM SNP 0024.scaffold00093 143092 1 T C - ScafM SNP 0024.scaffold00093 143169 1 C T scaffold459 ReadM SNP 0024.scaffold00093 143302 1 A G - ReadM SNP 0024.scaffold00093 143347 1 G A - ReadM SNP 0024.scaffold00093 144178 1 G T - ReadM SNP 0024.scaffold00093 144259 1 T A - Both SNP 0024.scaffold00093 144567 1 A G scaffold459 Both SNP 0024.scaffold00093 144652 1 G T scaffold459 Both SNP 0024.scaffold00093 144779 1 T C scaffold459 Both SNP 0024.scaffold00093 144785 1 G C scaffold459 Both SNP 0024.scaffold00093 144963 1 A T scaffold459 Both SNP 0024.scaffold00093 145142 1 G A scaffold459 ReadM SNP 0024.scaffold00093 145419 1 T C - ReadM SNP 0024.scaffold00093 145504 1 C T - ReadM SNP 0024.scaffold00093 146155 1 A T - ReadM SNP 0024.scaffold00093 146676 1 A G - ReadM SNP 0024.scaffold00093 146727 1 G A - ReadM SNP 0024.scaffold00093 146988 1 T C - ReadM SNP 0024.scaffold00093 147061 1 G A - ReadM SNP 0024.scaffold00093 147139 1 T C - ReadM SNP 0024.scaffold00093 147551 1 C T - ReadM SNP 0024.scaffold00093 147623 1 G A - ReadM SNP 0024.scaffold00093 147961 1 A G - ReadM SNP 0024.scaffold00093 147988 1 C T - ReadM SNP 0024.scaffold00093 148800 1 G A - ReadM SNP 0024.scaffold00093 148893 1 A G - ReadM SNP 0024.scaffold00093 149427 1 G A - ReadM SNP 0024.scaffold00093 149607 1 C G - ReadM SNP 0024.scaffold00093 149619 1 T C - ReadM INDEL 0024.scaffold00093 149966 1 T . - ReadM SNP 0024.scaffold00093 150018 1 A T - ReadM SNP 0024.scaffold00093 150245 1 T C - ReadM SNP 0024.scaffold00093 150309 1 G A - ReadM SNP 0024.scaffold00093 150329 1 C T - ReadM INDEL 0024.scaffold00093 150589 1 . T - ReadM SNP 0024.scaffold00093 150827 1 G A - ReadM SNP 0024.scaffold00093 150963 1 G A - ReadM SNP 0024.scaffold00093 150985 1 T C - ReadM SNP 0024.scaffold00093 151039 1 G T - ReadM SNP 0024.scaffold00093 151544 1 A G - ReadM SNP 0024.scaffold00093 152506 1 C T - ReadM SNP 0024.scaffold00093 153133 1 C A - ReadM SNP 0024.scaffold00093 153401 1 C T - ReadM SNP 0024.scaffold00093 153506 1 A G - ReadM SNP 0024.scaffold00093 153544 1 G A - ReadM SNP 0024.scaffold00093 153615 1 C T - ReadM SNP 0024.scaffold00093 153876 1 A G - ReadM SNP 0024.scaffold00093 153906 1 T A - ReadM SNP 0024.scaffold00093 154002 1 G A - ReadM SNP 0024.scaffold00093 155748 1 A T - ReadM SNP 0024.scaffold00093 156119 1 C T - ReadM SNP 0024.scaffold00093 156420 1 T G - Both SNP 0024.scaffold00093 157458 1 T G scaffold28595 Both INDEL 0024.scaffold00093 157581 1 T . scaffold28595 ScafM SNP 0024.scaffold00093 157642 2 CA TG scaffold28595 Both SNP 0024.scaffold00093 158031 1 A G scaffold28595 Both INDEL 0024.scaffold00093 158198 1 . T scaffold28595 Both SNP 0024.scaffold00093 158409 1 A G scaffold28595 Both SNP 0024.scaffold00093 158431 1 A G scaffold28595 ScafM INDEL 0024.scaffold00093 158520 12 ............ CAAGCATGACCA scaffold28595 Both SNP 0024.scaffold00093 158719 1 C T scaffold28595 Both SNP 0024.scaffold00093 159071 1 A T scaffold28595 Both SNP 0024.scaffold00093 159267 1 A T scaffold28595 Both SNP 0024.scaffold00093 159624 1 T C scaffold28595 ReadM SNP 0024.scaffold00093 159705 1 G C - ReadM SNP 0024.scaffold00093 159718 1 C T - ReadM SNP 0024.scaffold00093 159764 1 A T - Both SNP 0024.scaffold00093 159911 1 A T scaffold28595 ScafM SNP 0024.scaffold00093 163475 1 C T scaffold695 ScafM SNP 0024.scaffold00093 163512 1 T C scaffold695 ScafM SNP 0024.scaffold00093 163530 1 T G scaffold695 ScafM SNP 0024.scaffold00093 163546 1 G A scaffold695 ScafM SNP 0024.scaffold00093 163581 1 A G scaffold695 ScafM SNP 0024.scaffold00093 163711 1 G A scaffold695 Both SNP 0024.scaffold00093 163932 1 T C scaffold695 Both INDEL 0024.scaffold00093 164134 1 G . scaffold695 Both SNP 0024.scaffold00093 164156 1 T C scaffold695 ScafM INDEL 0024.scaffold00093 164163 15 CTCACCCTCACTGCC ............... scaffold695 ScafM SNP 0024.scaffold00093 164587 1 C G scaffold695 ReadM SNP 0024.scaffold00093 164724 1 T C - Both INDEL 0024.scaffold00093 165013 1 T . scaffold695 Both SNP 0024.scaffold00093 165056 1 T A scaffold695 Both SNP 0024.scaffold00093 165136 1 T C scaffold695 ScafM INDEL 0024.scaffold00093 165190 7 AAGTCAG ....... scaffold695 ReadM SNP 0024.scaffold00093 165294 1 A G - ReadM SNP 0024.scaffold00093 165404 1 C T - ReadM SNP 0024.scaffold00093 165427 1 A G - ReadM INDEL 0024.scaffold00093 165431 1 C . - Both SNP 0024.scaffold00093 165642 1 G T scaffold695 ScafM INDEL 0024.scaffold00093 165685 4 GAGT .... scaffold695 ScafM SNP 0024.scaffold00093 165786 1 C A scaffold695 ScafM SNP 0024.scaffold00093 165933 1 G A scaffold695 ScafM SNP 0024.scaffold00093 165936 1 T G scaffold695 ScafM SNP 0024.scaffold00093 165989 1 C A scaffold695 Both SNP 0024.scaffold00093 166058 2 AA TT scaffold695 Both SNP 0024.scaffold00093 166086 1 C A scaffold695 Both SNP 0024.scaffold00093 166155 1 A C scaffold695 Both SNP 0024.scaffold00093 166199 1 A G scaffold695 ReadM INDEL 0024.scaffold00093 166302 1 T . - Both INDEL 0024.scaffold00093 166406 1 . T scaffold695 ScafM SNP 0024.scaffold00093 166408 1 G T scaffold695 Both SNP 0024.scaffold00093 166459 1 C A scaffold695 ScafM SNP 0024.scaffold00093 166543 1 A T scaffold695 ScafM SNP 0024.scaffold00093 166593 1 T C scaffold695 ReadM SNP 0024.scaffold00093 166805 1 C T - ReadM SNP 0024.scaffold00093 166827 1 G T - Both INDEL 0024.scaffold00093 166873 1 . T scaffold695 Both SNP 0024.scaffold00093 166886 1 C T scaffold695 Both SNP 0024.scaffold00093 166903 1 A G scaffold695 Both SNP 0024.scaffold00093 166982 1 C T scaffold695 Both SNP 0024.scaffold00093 167028 1 A G scaffold695 Both INDEL 0024.scaffold00093 167086 2 AC .. scaffold695 ScafM SNP 0024.scaffold00093 167089 1 A T scaffold695 Both SNP 0024.scaffold00093 167181 1 G C scaffold695 Both SNP 0024.scaffold00093 167209 1 T C scaffold695 Both SNP 0024.scaffold00093 167276 1 C T scaffold695 Both SNP 0024.scaffold00093 167283 1 T A scaffold695 ReadM SNP 0024.scaffold00093 167449 1 A G - ReadM INDEL 0024.scaffold00093 167841 2 .. AG - ReadM INDEL 0024.scaffold00093 167845 2 .. AT - ReadM SNP 0024.scaffold00093 167903 1 C T - ReadM SNP 0024.scaffold00093 167964 1 T C - ReadM SNP 0024.scaffold00093 168013 1 G A - Both SNP 0024.scaffold00093 168138 1 G C scaffold695 ReadM SNP 0024.scaffold00093 168534 1 T C - Both SNP 0024.scaffold00093 168673 1 C T scaffold695 Both SNP 0024.scaffold00093 168988 1 G T scaffold695 Both SNP 0024.scaffold00093 168995 1 G A scaffold695 Both SNP 0024.scaffold00093 169344 1 A G scaffold695 Both SNP 0024.scaffold00093 169371 1 C T scaffold695 Both SNP 0024.scaffold00093 169452 1 C T scaffold695 Both SNP 0024.scaffold00093 169465 1 T A scaffold695 Both SNP 0024.scaffold00093 169872 1 G A scaffold695 Both SNP 0024.scaffold00093 170140 1 G A scaffold695 Both SNP 0024.scaffold00093 170334 1 T G scaffold695 Both SNP 0024.scaffold00093 170378 1 G A scaffold695 Both SNP 0024.scaffold00093 170671 1 T G scaffold695 Both SNP 0024.scaffold00093 170966 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 171532 5 ..... TATTT scaffold695 Both SNP 0024.scaffold00093 171550 1 A G scaffold695 Both SNP 0024.scaffold00093 172355 1 C A scaffold695 Both SNP 0024.scaffold00093 172406 1 T G scaffold695 Both SNP 0024.scaffold00093 172543 1 C T scaffold695 Both SNP 0024.scaffold00093 172610 1 A T scaffold695 Both SNP 0024.scaffold00093 172617 1 G T scaffold695 Both SNP 0024.scaffold00093 172658 1 T G scaffold695 Both SNP 0024.scaffold00093 172667 1 A G scaffold695 Both SNP 0024.scaffold00093 172848 1 C A scaffold695 Both SNP 0024.scaffold00093 172860 1 T A scaffold695 Both SNP 0024.scaffold00093 173007 1 A G scaffold695 Both SNP 0024.scaffold00093 173116 1 G A scaffold695 Both SNP 0024.scaffold00093 173214 1 A C scaffold695 Both SNP 0024.scaffold00093 173251 1 T G scaffold695 Both SNP 0024.scaffold00093 173289 1 T A scaffold695 Both SNP 0024.scaffold00093 173322 1 C T scaffold695 Both SNP 0024.scaffold00093 173330 1 G A scaffold695 Both SNP 0024.scaffold00093 173366 1 A C scaffold695 ScafM SNP 0024.scaffold00093 173508 1 C T scaffold695 ScafM SNP 0024.scaffold00093 173525 1 A G scaffold695 ScafM INDEL 0024.scaffold00093 173695 2 TC .. scaffold695 ScafM SNP 0024.scaffold00093 173811 1 T C scaffold695 ScafM SNP 0024.scaffold00093 174983 1 T C scaffold695 ScafM SNP 0024.scaffold00093 175065 1 C T scaffold695 ScafM SNP 0024.scaffold00093 175093 1 G A scaffold695 ScafM SNP 0024.scaffold00093 175112 1 T C scaffold695 ScafM SNP 0024.scaffold00093 175203 1 C G scaffold695 Both SNP 0024.scaffold00093 175516 1 T C scaffold695 Both SNP 0024.scaffold00093 175557 1 A T scaffold695 Both SNP 0024.scaffold00093 175608 1 G A scaffold695 Both SNP 0024.scaffold00093 175623 1 T C scaffold695 Both SNP 0024.scaffold00093 175655 1 A T scaffold695 Both SNP 0024.scaffold00093 175805 1 C T scaffold695 Both INDEL 0024.scaffold00093 175916 3 TTT ... scaffold695 Both SNP 0024.scaffold00093 176080 1 C T scaffold695 Both SNP 0024.scaffold00093 176273 1 T G scaffold695 Both SNP 0024.scaffold00093 176282 1 G A scaffold695 ScafM SNP 0024.scaffold00093 176340 2 GC AG scaffold695 ScafM SNP 0024.scaffold00093 176343 1 C G scaffold695 Both SNP 0024.scaffold00093 176364 1 T C scaffold695 Both SNP 0024.scaffold00093 176467 1 T C scaffold695 Both SNP 0024.scaffold00093 176520 1 A G scaffold695 Both SNP 0024.scaffold00093 176560 1 C T scaffold695 Both SNP 0024.scaffold00093 176645 1 G A scaffold695 Both SNP 0024.scaffold00093 176655 1 A G scaffold695 Both SNP 0024.scaffold00093 176671 1 G A scaffold695 Both INDEL 0024.scaffold00093 176728 1 . T scaffold695 ScafM SNP 0024.scaffold00093 176730 1 G T scaffold695 Both SNP 0024.scaffold00093 176813 1 G A scaffold695 Both SNP 0024.scaffold00093 176893 1 T G scaffold695 Both SNP 0024.scaffold00093 177088 1 A T scaffold695 Both SNP 0024.scaffold00093 177103 1 T C scaffold695 Both SNP 0024.scaffold00093 177284 1 A G scaffold695 Both SNP 0024.scaffold00093 177371 1 C T scaffold695 Both SNP 0024.scaffold00093 177473 1 C A scaffold695 Both INDEL 0024.scaffold00093 177569 1 T . scaffold695 Both SNP 0024.scaffold00093 177583 1 G C scaffold695 Both SNP 0024.scaffold00093 177663 1 C T scaffold695 Both SNP 0024.scaffold00093 177807 1 C G scaffold695 Both SNP 0024.scaffold00093 177809 1 A G scaffold695 ScafM SNP 0024.scaffold00093 177853 1 A T scaffold695 ScafM SNP 0024.scaffold00093 177889 1 G C scaffold695 ScafM SNP 0024.scaffold00093 177940 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 177965 1 . T scaffold695 ScafM SNP 0024.scaffold00093 177992 1 C G scaffold695 ScafM SNP 0024.scaffold00093 178017 1 A G scaffold695 ScafM SNP 0024.scaffold00093 178074 1 T A scaffold695 ScafM SNP 0024.scaffold00093 178082 1 T G scaffold695 ScafM SNP 0024.scaffold00093 178112 1 C A scaffold695 ScafM SNP 0024.scaffold00093 178469 1 C G scaffold695 ScafM SNP 0024.scaffold00093 178491 1 C G scaffold695 ScafM INDEL 0024.scaffold00093 178609 4 .... TTTT scaffold695 ScafM SNP 0024.scaffold00093 178633 1 C T scaffold695 Both SNP 0024.scaffold00093 179121 1 T C scaffold695 Both SNP 0024.scaffold00093 179320 1 G T scaffold695 Both SNP 0024.scaffold00093 179452 1 T C scaffold695 Both SNP 0024.scaffold00093 180016 1 T G scaffold695 Both SNP 0024.scaffold00093 180288 1 T A scaffold695 Both INDEL 0024.scaffold00093 180310 1 A . scaffold695 Both SNP 0024.scaffold00093 180376 1 T A scaffold695 Both SNP 0024.scaffold00093 180455 1 A G scaffold695 Both SNP 0024.scaffold00093 180500 1 G A scaffold695 Both SNP 0024.scaffold00093 180507 1 T C scaffold695 Both INDEL 0024.scaffold00093 180531 1 . T scaffold695 Both SNP 0024.scaffold00093 180592 1 A G scaffold695 Both SNP 0024.scaffold00093 180902 1 A C scaffold695 Both SNP 0024.scaffold00093 180986 1 C G scaffold695 Both SNP 0024.scaffold00093 181012 1 A C scaffold695 ScafM SNP 0024.scaffold00093 181074 1 A C scaffold695 ScafM SNP 0024.scaffold00093 181108 1 A C scaffold695 Both SNP 0024.scaffold00093 181657 1 A G scaffold695 Both SNP 0024.scaffold00093 181697 1 A T scaffold695 Both SNP 0024.scaffold00093 181702 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 181782 2 CA .. scaffold695 ScafM INDEL 0024.scaffold00093 181799 4 GCTT .... scaffold695 Both SNP 0024.scaffold00093 181836 1 A T scaffold695 Both SNP 0024.scaffold00093 181840 1 G T scaffold695 Both SNP 0024.scaffold00093 181920 1 T C scaffold695 Both SNP 0024.scaffold00093 181924 1 C G scaffold695 Both SNP 0024.scaffold00093 181950 1 G C scaffold695 Both SNP 0024.scaffold00093 182022 1 C T scaffold695 Both SNP 0024.scaffold00093 182091 1 C A scaffold695 Both SNP 0024.scaffold00093 182111 1 T C scaffold695 Both SNP 0024.scaffold00093 182160 1 C A scaffold695 Both SNP 0024.scaffold00093 182338 1 G A scaffold695 Both SNP 0024.scaffold00093 182344 1 C T scaffold695 Both SNP 0024.scaffold00093 182370 1 G C scaffold695 Both SNP 0024.scaffold00093 182413 1 T C scaffold695 Both SNP 0024.scaffold00093 182438 1 T C scaffold695 Both SNP 0024.scaffold00093 182441 1 A G scaffold695 Both SNP 0024.scaffold00093 182529 1 C G scaffold695 Both SNP 0024.scaffold00093 182553 1 A G scaffold695 Both SNP 0024.scaffold00093 182561 1 G C scaffold695 Both SNP 0024.scaffold00093 182607 1 A G scaffold695 Both SNP 0024.scaffold00093 182629 1 T C scaffold695 Both SNP 0024.scaffold00093 182692 1 A C scaffold695 ScafM INDEL 0024.scaffold00093 182777 2 AA .. scaffold695 ScafM SNP 0024.scaffold00093 182982 1 T A scaffold695 ScafM SNP 0024.scaffold00093 182987 1 A T scaffold695 ScafM SNP 0024.scaffold00093 183420 1 T C scaffold54194 ScafM SNP 0024.scaffold00093 183428 1 G A scaffold54194 ScafM SNP 0024.scaffold00093 183451 1 T G scaffold54194 ScafM SNP 0024.scaffold00093 183493 1 C T scaffold54194 ScafM SNP 0024.scaffold00093 183518 1 A T scaffold54194 ReadM SNP 0024.scaffold00093 189898 1 G A - ReadM SNP 0024.scaffold00093 189913 1 A G - ReadM SNP 0024.scaffold00093 189957 1 C T - ScafM INDEL 0024.scaffold00093 190164 1 . T scaffold695 ScafM INDEL 0024.scaffold00093 190183 3 AAA ... scaffold695 Both SNP 0024.scaffold00093 190303 1 G A scaffold695 Both SNP 0024.scaffold00093 190404 1 A T scaffold695 ScafM SNP 0024.scaffold00093 190530 1 G A scaffold695 ScafM SNP 0024.scaffold00093 190668 1 T A scaffold695 ScafM SNP 0024.scaffold00093 190787 1 G A scaffold695 ScafM SNP 0024.scaffold00093 190810 1 G C scaffold695 ScafM SNP 0024.scaffold00093 191869 1 T C scaffold695 ReadM SNP 0024.scaffold00093 192140 1 T A - ReadM SNP 0024.scaffold00093 192144 1 C A - Both SNP 0024.scaffold00093 192264 1 T C scaffold695 Both SNP 0024.scaffold00093 192323 1 G A scaffold695 Both SNP 0024.scaffold00093 192329 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 192373 3 GGG ... scaffold695 ScafM SNP 0024.scaffold00093 192377 1 G A scaffold695 Both SNP 0024.scaffold00093 192389 1 G T scaffold695 Both SNP 0024.scaffold00093 192443 1 G A scaffold695 Both SNP 0024.scaffold00093 192501 1 T C scaffold695 Both SNP 0024.scaffold00093 192537 1 G T scaffold695 Both SNP 0024.scaffold00093 192583 1 C T scaffold695 Both SNP 0024.scaffold00093 192624 1 C T scaffold695 Both SNP 0024.scaffold00093 192660 1 G C scaffold695 Both SNP 0024.scaffold00093 192690 1 A G scaffold695 Both SNP 0024.scaffold00093 192724 1 T C scaffold695 Both SNP 0024.scaffold00093 192814 1 A G scaffold695 Both SNP 0024.scaffold00093 192840 1 A G scaffold695 Both SNP 0024.scaffold00093 192850 1 T C scaffold695 ReadM INDEL 0024.scaffold00093 192883 1 T . - ReadM SNP 0024.scaffold00093 192940 1 C A - ScafM INDEL 0024.scaffold00093 192974 2 .. GA scaffold695 Both SNP 0024.scaffold00093 192999 1 G A scaffold695 ReadM SNP 0024.scaffold00093 193069 1 T C - ReadM SNP 0024.scaffold00093 193073 1 T C - Both SNP 0024.scaffold00093 193287 1 A G scaffold695 ReadM SNP 0024.scaffold00093 193336 1 A G - ReadM SNP 0024.scaffold00093 193458 1 G C - ScafM SNP 0024.scaffold00093 193496 1 G A scaffold695 ScafM SNP 0024.scaffold00093 193625 1 C T scaffold695 ScafM SNP 0024.scaffold00093 193650 1 C T scaffold695 ScafM SNP 0024.scaffold00093 193652 1 A C scaffold695 ScafM SNP 0024.scaffold00093 195024 1 C T scaffold695 ScafM SNP 0024.scaffold00093 195061 1 T C scaffold695 ScafM INDEL 0024.scaffold00093 195064 2 .. TT scaffold695 ScafM SNP 0024.scaffold00093 195167 1 A G scaffold695 ScafM SNP 0024.scaffold00093 195219 1 C T scaffold695 ScafM SNP 0024.scaffold00093 195314 1 T C scaffold695 ScafM SNP 0024.scaffold00093 195371 1 G T scaffold695 ScafM SNP 0024.scaffold00093 195386 1 G A scaffold695 ReadM SNP 0024.scaffold00093 195651 1 G A - ReadM INDEL 0024.scaffold00093 195660 1 . T - ReadM SNP 0024.scaffold00093 195717 1 C T - ReadM SNP 0024.scaffold00093 195780 1 T G - ReadM SNP 0024.scaffold00093 196014 1 G A - ReadM INDEL 0024.scaffold00093 196016 1 . A - ReadM SNP 0024.scaffold00093 196146 1 C T - ReadM SNP 0024.scaffold00093 196218 1 T C - ReadM SNP 0024.scaffold00093 196278 1 A T - ReadM SNP 0024.scaffold00093 196312 1 T A - ReadM SNP 0024.scaffold00093 196499 1 G T - ReadM SNP 0024.scaffold00093 196544 1 A G - ReadM SNP 0024.scaffold00093 196822 1 G A - ReadM SNP 0024.scaffold00093 196835 1 C T - ReadM SNP 0024.scaffold00093 196942 1 A G - ReadM SNP 0024.scaffold00093 197855 1 T C - ReadM SNP 0024.scaffold00093 198181 1 G A - ReadM SNP 0024.scaffold00093 198211 1 C T - ReadM INDEL 0024.scaffold00093 198330 1 A . - ReadM SNP 0024.scaffold00093 198372 1 A T - ReadM SNP 0024.scaffold00093 198654 1 G A - ReadM SNP 0024.scaffold00093 198698 1 T C - ReadM SNP 0024.scaffold00093 198776 1 T C - ReadM SNP 0024.scaffold00093 198786 1 T C - ReadM SNP 0024.scaffold00093 198814 1 C G - ReadM SNP 0024.scaffold00093 198860 1 T C - ReadM SNP 0024.scaffold00093 198868 1 C T - ScafM SNP 0024.scaffold00093 199390 1 G A scaffold695 ScafM SNP 0024.scaffold00093 201937 1 T C scaffold695 ScafM SNP 0024.scaffold00093 201983 1 T G scaffold695 ScafM SNP 0024.scaffold00093 201989 1 T C scaffold695 ReadM SNP 0024.scaffold00093 202123 1 A C - ReadM SNP 0024.scaffold00093 202374 1 C T - ReadM SNP 0024.scaffold00093 202412 1 A T - ScafM INDEL 0024.scaffold00093 202512 1 A . scaffold695 ScafM SNP 0024.scaffold00093 202517 1 A T scaffold695 ScafM SNP 0024.scaffold00093 202546 1 C A scaffold695 ScafM SNP 0024.scaffold00093 202555 1 C A scaffold695 ReadM SNP 0024.scaffold00093 202590 1 A C - ReadM SNP 0024.scaffold00093 202627 1 G T - ReadM INDEL 0024.scaffold00093 202657 1 . T - ReadM SNP 0024.scaffold00093 203132 1 A G - ScafM INDEL 0024.scaffold00093 209654 1 A . scaffold695 Both SNP 0024.scaffold00093 209691 1 G A scaffold695 Both INDEL 0024.scaffold00093 209767 1 . T scaffold695 ScafM SNP 0024.scaffold00093 209942 1 C G scaffold695 Both SNP 0024.scaffold00093 210195 1 A C scaffold695 Both SNP 0024.scaffold00093 210202 1 G C scaffold695 Both INDEL 0024.scaffold00093 210205 1 . A scaffold695 Both SNP 0024.scaffold00093 210323 1 G C scaffold695 Both SNP 0024.scaffold00093 210326 1 A G scaffold695 Both INDEL 0024.scaffold00093 210397 1 A . scaffold695 Both SNP 0024.scaffold00093 210444 1 T C scaffold695 Both SNP 0024.scaffold00093 210476 2 AC GT scaffold695 Both SNP 0024.scaffold00093 210543 1 T A scaffold695 Both SNP 0024.scaffold00093 210648 1 A G scaffold695 Both SNP 0024.scaffold00093 210688 1 T C scaffold695 Both SNP 0024.scaffold00093 210717 1 A G scaffold695 Both SNP 0024.scaffold00093 210759 1 C T scaffold695 Both SNP 0024.scaffold00093 210774 1 C A scaffold695 ScafM SNP 0024.scaffold00093 210792 1 A T scaffold695 ScafM SNP 0024.scaffold00093 210796 1 T C scaffold695 ScafM SNP 0024.scaffold00093 210874 3 AAC GGT scaffold695 ScafM SNP 0024.scaffold00093 210916 2 AG TT scaffold695 Both SNP 0024.scaffold00093 210958 1 T A scaffold695 Both SNP 0024.scaffold00093 211009 1 A C scaffold695 Both SNP 0024.scaffold00093 211040 1 T C scaffold695 Both SNP 0024.scaffold00093 211067 1 T C scaffold695 Both SNP 0024.scaffold00093 211111 1 A G scaffold695 ScafM SNP 0024.scaffold00093 211131 1 T G scaffold695 ScafM SNP 0024.scaffold00093 211133 1 C T scaffold695 ScafM SNP 0024.scaffold00093 211135 1 G C scaffold695 ScafM SNP 0024.scaffold00093 211191 1 G A scaffold695 ScafM INDEL 0024.scaffold00093 211195 3 ... AAG scaffold695 ScafM SNP 0024.scaffold00093 211249 1 G A scaffold695 ScafM SNP 0024.scaffold00093 211281 1 T C scaffold695 ScafM SNP 0024.scaffold00093 211284 1 T G scaffold695 ScafM SNP 0024.scaffold00093 211297 1 C A scaffold695 ScafM SNP 0024.scaffold00093 211324 1 T C scaffold695 Both SNP 0024.scaffold00093 211357 1 T C scaffold695 Both SNP 0024.scaffold00093 211365 1 A C scaffold695 Both SNP 0024.scaffold00093 211394 1 G A scaffold695 Both SNP 0024.scaffold00093 211444 1 T C scaffold695 Both SNP 0024.scaffold00093 211449 1 C A scaffold695 Both SNP 0024.scaffold00093 211680 1 G A scaffold695 Both SNP 0024.scaffold00093 211807 1 T C scaffold695 Both SNP 0024.scaffold00093 211846 1 G C scaffold695 Both SNP 0024.scaffold00093 211936 1 A T scaffold695 Both SNP 0024.scaffold00093 211971 1 A T scaffold695 Both SNP 0024.scaffold00093 212025 1 G A scaffold695 Both INDEL 0024.scaffold00093 212076 1 . A scaffold695 ScafM SNP 0024.scaffold00093 212078 1 G T scaffold695 Both SNP 0024.scaffold00093 212114 1 A G scaffold695 ScafM SNP 0024.scaffold00093 212162 1 T A scaffold695 ScafM SNP 0024.scaffold00093 212170 1 G C scaffold695 ScafM SNP 0024.scaffold00093 212183 1 A G scaffold695 ScafM SNP 0024.scaffold00093 212214 1 C A scaffold695 ScafM SNP 0024.scaffold00093 212223 1 C T scaffold695 ScafM SNP 0024.scaffold00093 212256 1 G A scaffold695 ScafM SNP 0024.scaffold00093 212278 2 AA GT scaffold695 ScafM SNP 0024.scaffold00093 212289 1 T G scaffold695 ScafM INDEL 0024.scaffold00093 212450 14 .............. ACTTTTTCCTTTTT scaffold695 ScafM INDEL 0024.scaffold00093 212458 5 ..... CTTTT scaffold695 ScafM INDEL 0024.scaffold00093 212459 2 .. CC scaffold695 ScafM INDEL 0024.scaffold00093 212514 1 A . scaffold695 ScafM INDEL 0024.scaffold00093 212517 1 A . scaffold695 ScafM SNP 0024.scaffold00093 212524 1 G T scaffold695 ScafM SNP 0024.scaffold00093 212564 1 A G scaffold695 ScafM SNP 0024.scaffold00093 213040 1 C T scaffold695 ScafM SNP 0024.scaffold00093 213055 1 A C scaffold695 ScafM SNP 0024.scaffold00093 213059 1 T A scaffold695 ScafM SNP 0024.scaffold00093 213328 1 A G scaffold695 ScafM SNP 0024.scaffold00093 213340 1 G C scaffold695 ScafM INDEL 0024.scaffold00093 213348 1 T . scaffold695 ScafM INDEL 0024.scaffold00093 213350 1 . T scaffold695 ScafM SNP 0024.scaffold00093 213359 1 C G scaffold695 ScafM SNP 0024.scaffold00093 213390 1 A G scaffold695 ScafM INDEL 0024.scaffold00093 213395 2 .. TT scaffold695 Both SNP 0024.scaffold00093 213468 1 T G scaffold695 Both SNP 0024.scaffold00093 213522 1 G T scaffold695 Both SNP 0024.scaffold00093 213530 1 A C scaffold695 ScafM SNP 0024.scaffold00093 213539 3 ATA GGG scaffold695 ScafM SNP 0024.scaffold00093 213547 1 G C scaffold695 ScafM INDEL 0024.scaffold00093 213554 1 G . scaffold695 ScafM SNP 0024.scaffold00093 213578 1 G A scaffold695 ScafM INDEL 0024.scaffold00093 213587 1 T . scaffold695 ScafM SNP 0024.scaffold00093 213595 1 T C scaffold695 ScafM SNP 0024.scaffold00093 213600 1 T C scaffold695 ScafM SNP 0024.scaffold00093 213603 1 G A scaffold695 ScafM SNP 0024.scaffold00093 213894 1 G T scaffold695 ScafM SNP 0024.scaffold00093 213917 1 A T scaffold695 ScafM SNP 0024.scaffold00093 213919 1 C G scaffold695 ScafM SNP 0024.scaffold00093 213947 1 T C scaffold695 ScafM SNP 0024.scaffold00093 213980 1 T G scaffold695 ScafM SNP 0024.scaffold00093 213986 1 C T scaffold695 Both SNP 0024.scaffold00093 214023 1 T C scaffold695 Both SNP 0024.scaffold00093 214054 1 G C scaffold695 ScafM SNP 0024.scaffold00093 214069 1 C A scaffold695 ScafM SNP 0024.scaffold00093 214097 1 T G scaffold695 ScafM SNP 0024.scaffold00093 214120 1 G A scaffold695 ScafM SNP 0024.scaffold00093 214143 1 T C scaffold695 ScafM SNP 0024.scaffold00093 214149 1 G C scaffold695 ScafM SNP 0024.scaffold00093 214170 1 G C scaffold695 ScafM SNP 0024.scaffold00093 214197 1 T C scaffold695 ScafM SNP 0024.scaffold00093 214247 1 T C scaffold695 ScafM SNP 0024.scaffold00093 214259 1 G A scaffold695 ScafM SNP 0024.scaffold00093 214280 1 A G scaffold695 ScafM SNP 0024.scaffold00093 214284 1 C T scaffold695 ScafM SNP 0024.scaffold00093 214289 1 G A scaffold695 ScafM SNP 0024.scaffold00093 214295 1 G C scaffold695 ScafM INDEL 0024.scaffold00093 214298 1 G . scaffold695 ScafM SNP 0024.scaffold00093 214312 1 A C scaffold695 ScafM SNP 0024.scaffold00093 214328 1 A G scaffold695 ScafM SNP 0024.scaffold00093 214336 1 T C scaffold695 ScafM SNP 0024.scaffold00093 214392 1 A G scaffold695 ScafM SNP 0024.scaffold00093 214410 1 A G scaffold695 ScafM SNP 0024.scaffold00093 214443 1 A G scaffold695 ScafM SNP 0024.scaffold00093 214477 1 G A scaffold695 ScafM SNP 0024.scaffold00093 214860 1 C A scaffold695 ScafM SNP 0024.scaffold00093 214872 2 GC TT scaffold695 ScafM SNP 0024.scaffold00093 214969 1 G T scaffold695 ScafM INDEL 0024.scaffold00093 214994 6 ...... AACCTT scaffold695 ScafM INDEL 0024.scaffold00093 214996 1 . T scaffold695 ScafM INDEL 0024.scaffold00093 214998 1 . C scaffold695 ScafM INDEL 0024.scaffold00093 214999 1 . C scaffold695 ScafM SNP 0024.scaffold00093 215034 1 C A scaffold695 ScafM INDEL 0024.scaffold00093 215038 1 . C scaffold695 ScafM SNP 0024.scaffold00093 215054 1 T A scaffold695 ScafM SNP 0024.scaffold00093 215077 1 C T scaffold695 ScafM SNP 0024.scaffold00093 215095 1 A G scaffold695 ScafM SNP 0024.scaffold00093 215115 1 A G scaffold695 ScafM SNP 0024.scaffold00093 215138 1 G T scaffold695 ScafM SNP 0024.scaffold00093 215143 1 T C scaffold695 ScafM SNP 0024.scaffold00093 215151 1 G A scaffold695 ScafM SNP 0024.scaffold00093 215155 1 C T scaffold695 ScafM SNP 0024.scaffold00093 215160 1 C T scaffold695 ScafM SNP 0024.scaffold00093 215170 1 A C scaffold695 ScafM INDEL 0024.scaffold00093 215171 3 ... CTC scaffold695 ScafM SNP 0024.scaffold00093 215189 1 T C scaffold695 ScafM SNP 0024.scaffold00093 215193 1 G A scaffold695 ScafM SNP 0024.scaffold00093 215305 2 AG GA scaffold695 ScafM SNP 0024.scaffold00093 215416 1 T C scaffold695 ScafM SNP 0024.scaffold00093 215429 1 C A scaffold695 ScafM SNP 0024.scaffold00093 215432 1 A G scaffold695 ScafM INDEL 0024.scaffold00093 215474 1 T . scaffold695 ScafM INDEL 0024.scaffold00093 215549 2 TT .. scaffold695 ScafM INDEL 0024.scaffold00093 215555 1 A . scaffold695 ScafM SNP 0024.scaffold00093 215564 1 G A scaffold695 ScafM INDEL 0024.scaffold00093 215569 2 TT .. scaffold695 ScafM SNP 0024.scaffold00093 215574 1 C T scaffold695 ScafM SNP 0024.scaffold00093 215588 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 215602 8 GCGTTTTA ........ scaffold695 ScafM SNP 0024.scaffold00093 215636 1 G C scaffold695 ScafM SNP 0024.scaffold00093 215728 1 G A scaffold695 Both SNP 0024.scaffold00093 215775 1 C T scaffold695 ScafM SNP 0024.scaffold00093 215811 1 T C scaffold695 ScafM SNP 0024.scaffold00093 215864 1 C A scaffold695 ScafM SNP 0024.scaffold00093 215866 1 A G scaffold695 ScafM INDEL 0024.scaffold00093 216227 2 .G AA scaffold695 ScafM SNP 0024.scaffold00093 216243 1 C G scaffold695 ScafM SNP 0024.scaffold00093 216257 1 G T scaffold695 ScafM INDEL 0024.scaffold00093 216265 3 TCC ... scaffold695 ScafM SNP 0024.scaffold00093 216272 1 G A scaffold695 ScafM SNP 0024.scaffold00093 216285 1 A C scaffold695 ScafM SNP 0024.scaffold00093 216332 1 G A scaffold695 ScafM SNP 0024.scaffold00093 216339 1 C T scaffold695 ScafM SNP 0024.scaffold00093 216364 1 A C scaffold695 ScafM SNP 0024.scaffold00093 216422 1 T A scaffold695 ScafM SNP 0024.scaffold00093 216430 1 T C scaffold695 ScafM SNP 0024.scaffold00093 216436 1 T C scaffold695 ScafM SNP 0024.scaffold00093 216466 1 T C scaffold695 ScafM SNP 0024.scaffold00093 216486 1 C A scaffold695 ReadM SNP 0024.scaffold00093 216630 1 A G - ScafM INDEL 0024.scaffold00093 216693 3 TAA ... scaffold695 ScafM SNP 0024.scaffold00093 216724 2 AT GA scaffold695 ScafM SNP 0024.scaffold00093 216736 1 A G scaffold695 Both SNP 0024.scaffold00093 216820 1 A G scaffold695 Both SNP 0024.scaffold00093 216842 1 G A scaffold695 ScafM SNP 0024.scaffold00093 216848 1 G A scaffold695 ReadM SNP 0024.scaffold00093 216877 1 C T - ReadM SNP 0024.scaffold00093 216896 1 C A - ScafM INDEL 0024.scaffold00093 217103 2 .. AT scaffold695 ScafM SNP 0024.scaffold00093 217108 1 C T scaffold695 ScafM SNP 0024.scaffold00093 217112 1 A T scaffold695 ReadM SNP 0024.scaffold00093 217252 1 G A - ReadM SNP 0024.scaffold00093 217341 1 T C - Both SNP 0024.scaffold00093 217419 1 A T scaffold695 Both SNP 0024.scaffold00093 217449 1 T C scaffold695 ScafM SNP 0024.scaffold00093 217594 1 T C scaffold695 ScafM SNP 0024.scaffold00093 217596 1 G A scaffold695 ScafM SNP 0024.scaffold00093 217615 1 A G scaffold695 ScafM SNP 0024.scaffold00093 217628 1 G A scaffold695 ScafM SNP 0024.scaffold00093 217635 1 A T scaffold695 ScafM SNP 0024.scaffold00093 217664 3 CAA TGG scaffold695 ScafM SNP 0024.scaffold00093 217686 1 C T scaffold695 ScafM SNP 0024.scaffold00093 217712 1 A C scaffold695 ScafM SNP 0024.scaffold00093 217720 1 T C scaffold695 ScafM INDEL 0024.scaffold00093 217731 44 TACAGGACGCTTACCTAGCCAACGCTTAGATCCGACTCTACCCA ............................................ scaffold695 ScafM INDEL 0024.scaffold00093 217776 1 C . scaffold695 ScafM INDEL 0024.scaffold00093 217782 11 CTGGTTCACTC ........... scaffold695 ScafM INDEL 0024.scaffold00093 217794 6 CTTTTT ...... scaffold695 ScafM SNP 0024.scaffold00093 217815 1 G A scaffold695 ScafM SNP 0024.scaffold00093 217825 1 A T scaffold695 ScafM INDEL 0024.scaffold00093 217830 1 T . scaffold695 ScafM SNP 0024.scaffold00093 217835 1 T A scaffold695 ScafM SNP 0024.scaffold00093 217886 2 CC TA scaffold695 Both SNP 0024.scaffold00093 217915 1 G A scaffold695 Both SNP 0024.scaffold00093 217940 1 C T scaffold695 Both SNP 0024.scaffold00093 217992 1 C A scaffold695 ScafM SNP 0024.scaffold00093 218009 1 A T scaffold695 ScafM SNP 0024.scaffold00093 218023 1 T G scaffold695 ScafM SNP 0024.scaffold00093 218042 1 C A scaffold695 ScafM SNP 0024.scaffold00093 218070 1 T C scaffold695 ScafM INDEL 0024.scaffold00093 218144 12 ............ TACAATTTTCCC scaffold695 ScafM SNP 0024.scaffold00093 218146 1 C T scaffold695 ScafM INDEL 0024.scaffold00093 218147 3 ... TAT scaffold695 ScafM INDEL 0024.scaffold00093 218153 23 ....................... CAAAATTTTCGTGTGGGGACTTT scaffold695 ScafM SNP 0024.scaffold00093 218157 1 G A scaffold695 ScafM SNP 0024.scaffold00093 218190 1 G T scaffold695 ScafM SNP 0024.scaffold00093 218227 1 G T scaffold695 ScafM SNP 0024.scaffold00093 218260 1 T C scaffold695 ScafM SNP 0024.scaffold00093 218286 1 T C scaffold695 ScafM SNP 0024.scaffold00093 218305 1 G T scaffold695 ScafM SNP 0024.scaffold00093 218309 1 A G scaffold695 ScafM INDEL 0024.scaffold00093 218318 1 . C scaffold695 ScafM SNP 0024.scaffold00093 218329 1 A C scaffold695 ScafM SNP 0024.scaffold00093 218350 1 C A scaffold695 ScafM SNP 0024.scaffold00093 218359 1 T C scaffold695 ReadM SNP 0024.scaffold00093 219020 1 T C - ReadM SNP 0024.scaffold00093 219278 1 C T - ReadM SNP 0024.scaffold00093 219300 1 G A - ReadM SNP 0024.scaffold00093 219508 1 T C - ReadM SNP 0024.scaffold00093 219532 1 T G - ReadM SNP 0024.scaffold00093 219739 1 G A - ReadM SNP 0024.scaffold00093 219817 1 A G - ReadM SNP 0024.scaffold00093 219839 1 T C - ReadM SNP 0024.scaffold00093 219841 1 G A - ReadM SNP 0024.scaffold00093 219991 1 A C - ReadM SNP 0024.scaffold00093 220024 1 A G - ReadM SNP 0024.scaffold00093 220182 1 T G - ReadM SNP 0024.scaffold00093 220235 1 T G - ReadM SNP 0024.scaffold00093 220246 1 A G - ReadM SNP 0024.scaffold00093 220310 1 C T - ReadM SNP 0024.scaffold00093 220339 1 C T - ReadM SNP 0024.scaffold00093 220450 1 G A - ScafM INDEL 0024.scaffold00093 221091 1 . T scaffold695 ScafM SNP 0024.scaffold00093 221160 3 CCC GTT scaffold695 ReadM SNP 0024.scaffold00093 222153 1 A T - Both SNP 0024.scaffold00093 222202 1 T C scaffold695 Both SNP 0024.scaffold00093 222260 1 A T scaffold695 Both SNP 0024.scaffold00093 222283 1 C T scaffold695 ScafM SNP 0024.scaffold00093 222308 1 C A scaffold695 ScafM SNP 0024.scaffold00093 222329 1 G A scaffold695 ScafM SNP 0024.scaffold00093 222360 1 A G scaffold695 ScafM SNP 0024.scaffold00093 222375 1 C T scaffold695 ScafM SNP 0024.scaffold00093 222389 1 A T scaffold695 ScafM SNP 0024.scaffold00093 222394 1 G T scaffold695 ScafM SNP 0024.scaffold00093 222413 1 A T scaffold695 Both SNP 0024.scaffold00093 222691 1 A C scaffold695 ReadM SNP 0024.scaffold00093 222708 1 A G - ScafM SNP 0024.scaffold00093 232080 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 232136 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 232155 2 CT GA scaffold5713 ScafM SNP 0024.scaffold00093 232171 1 C T scaffold5713 ScafM INDEL 0024.scaffold00093 232176 1 . T scaffold5713 ScafM SNP 0024.scaffold00093 232184 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232444 1 T G scaffold5713 ScafM SNP 0024.scaffold00093 232469 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 232479 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232502 2 AA GG scaffold5713 ScafM INDEL 0024.scaffold00093 232517 4 .... AATT scaffold5713 ScafM SNP 0024.scaffold00093 232518 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 232521 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 232524 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232528 1 G T scaffold5713 ScafM SNP 0024.scaffold00093 232535 1 C T scaffold5713 ScafM INDEL 0024.scaffold00093 232547 6 TTTTTT ...... scaffold5713 ScafM SNP 0024.scaffold00093 232555 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 232558 1 T A scaffold5713 ScafM INDEL 0024.scaffold00093 232589 1 A . scaffold5713 ScafM SNP 0024.scaffold00093 232595 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 232603 2 TT AC scaffold5713 ScafM SNP 0024.scaffold00093 232613 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232621 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 232623 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 232632 2 AT GC scaffold5713 ScafM SNP 0024.scaffold00093 232657 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 232705 1 C T scaffold5713 ScafM INDEL 0024.scaffold00093 232709 2 .. AA scaffold5713 ScafM SNP 0024.scaffold00093 232716 1 T G scaffold5713 ScafM INDEL 0024.scaffold00093 232721 1 . A scaffold5713 ScafM SNP 0024.scaffold00093 232735 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232754 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 232775 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 232780 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 240178 1 G T scaffold5713 ScafM SNP 0024.scaffold00093 240185 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 240220 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 240245 1 G A scaffold5713 ScafM INDEL 0024.scaffold00093 240257 3 TGT ... scaffold5713 ScafM SNP 0024.scaffold00093 240271 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 240283 1 T G scaffold5713 ScafM SNP 0024.scaffold00093 240288 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 240321 1 G T scaffold5713 ScafM SNP 0024.scaffold00093 240828 1 A T scaffold5713 ScafM INDEL 0024.scaffold00093 240833 1 . G scaffold5713 ScafM SNP 0024.scaffold00093 240843 1 A C scaffold5713 ScafM INDEL 0024.scaffold00093 240855 1 . G scaffold5713 ScafM INDEL 0024.scaffold00093 240856 2 .. TC scaffold5713 ScafM SNP 0024.scaffold00093 240880 1 G A scaffold5713 ScafM INDEL 0024.scaffold00093 240889 1 . C scaffold5713 ScafM SNP 0024.scaffold00093 240893 1 G C scaffold5713 ScafM INDEL 0024.scaffold00093 240901 1 . A scaffold5713 ScafM INDEL 0024.scaffold00093 240913 1 C . scaffold5713 ScafM SNP 0024.scaffold00093 240931 1 G C scaffold5713 ScafM SNP 0024.scaffold00093 240939 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 240952 1 T G scaffold5713 ScafM SNP 0024.scaffold00093 240954 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 240958 1 A T scaffold5713 ScafM SNP 0024.scaffold00093 240960 1 G T scaffold5713 ScafM SNP 0024.scaffold00093 240996 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 240999 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241010 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 241018 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241025 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241027 2 TA AG scaffold5713 ScafM SNP 0024.scaffold00093 241036 2 GA AG scaffold5713 ScafM SNP 0024.scaffold00093 241063 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241084 1 T C scaffold5713 ScafM INDEL 0024.scaffold00093 241097 8 ........ GGAAAATC scaffold5713 ScafM SNP 0024.scaffold00093 241110 1 G A scaffold5713 ScafM INDEL 0024.scaffold00093 241138 5 TTTGT ..... scaffold5713 ScafM SNP 0024.scaffold00093 241173 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241176 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 241194 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241204 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 241210 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 241232 2 GC AT scaffold5713 ScafM SNP 0024.scaffold00093 241247 1 T C scaffold5713 ScafM SNP 0024.scaffold00093 241253 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241322 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241328 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241334 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241356 1 A T scaffold5713 ScafM SNP 0024.scaffold00093 241379 1 A T scaffold5713 ScafM SNP 0024.scaffold00093 241381 2 AA GG scaffold5713 ScafM SNP 0024.scaffold00093 241385 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241391 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241395 3 AAA TCG scaffold5713 ScafM SNP 0024.scaffold00093 241402 1 A T scaffold5713 ScafM SNP 0024.scaffold00093 241404 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 241406 1 T G scaffold5713 ScafM INDEL 0024.scaffold00093 241424 2 AT .. scaffold5713 ScafM SNP 0024.scaffold00093 241427 1 T C scaffold5713 ScafM INDEL 0024.scaffold00093 241452 8 ........ AGTTGTAA scaffold5713 ScafM SNP 0024.scaffold00093 241458 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241473 1 T A scaffold5713 ScafM INDEL 0024.scaffold00093 241481 3 GAA ... scaffold5713 ScafM SNP 0024.scaffold00093 241503 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241505 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 241526 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241531 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241536 1 A G scaffold5713 ScafM INDEL 0024.scaffold00093 241547 1 T . scaffold5713 ScafM SNP 0024.scaffold00093 241553 2 CT TA scaffold5713 ScafM SNP 0024.scaffold00093 241559 3 GGA TAG scaffold5713 ScafM SNP 0024.scaffold00093 241565 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241568 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 241570 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 241586 1 G A scaffold5713 ScafM SNP 0024.scaffold00093 241588 1 C G scaffold5713 ScafM SNP 0024.scaffold00093 241597 1 C A scaffold5713 ScafM SNP 0024.scaffold00093 241603 1 C G scaffold5713 ScafM SNP 0024.scaffold00093 241607 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 242140 1 T A scaffold5713 ScafM SNP 0024.scaffold00093 242159 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 242164 1 A G scaffold5713 ScafM SNP 0024.scaffold00093 242180 1 C T scaffold5713 ScafM SNP 0024.scaffold00093 242204 1 T G scaffold5713 ScafM SNP 0024.scaffold00093 256312 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256315 1 C A scaffold13020 ScafM SNP 0024.scaffold00093 256318 1 T G scaffold13020 ScafM SNP 0024.scaffold00093 256332 1 G C scaffold13020 ScafM SNP 0024.scaffold00093 256343 1 A G scaffold13020 ScafM SNP 0024.scaffold00093 256351 1 T A scaffold13020 ScafM SNP 0024.scaffold00093 256356 1 C G scaffold13020 ScafM SNP 0024.scaffold00093 256362 2 TT AG scaffold13020 ScafM SNP 0024.scaffold00093 256365 1 A C scaffold13020 ScafM SNP 0024.scaffold00093 256378 3 TGG CAA scaffold13020 ScafM SNP 0024.scaffold00093 256386 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256401 1 A G scaffold13020 ScafM SNP 0024.scaffold00093 256415 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256434 1 A C scaffold13020 ScafM SNP 0024.scaffold00093 256448 1 A C scaffold13020 ScafM SNP 0024.scaffold00093 256468 1 A C scaffold13020 ScafM SNP 0024.scaffold00093 256473 1 A G scaffold13020 ScafM SNP 0024.scaffold00093 256477 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256482 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256490 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256494 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256498 1 C T scaffold13020 ScafM SNP 0024.scaffold00093 256501 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256506 2 TT CC scaffold13020 ScafM SNP 0024.scaffold00093 256510 1 A T scaffold13020 ScafM INDEL 0024.scaffold00093 256516 5 TCCGA ..... scaffold13020 ScafM INDEL 0024.scaffold00093 256543 4 AATT .... scaffold13020 ScafM SNP 0024.scaffold00093 256552 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256554 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256558 2 TA CC scaffold13020 ScafM SNP 0024.scaffold00093 256569 3 TAT GTG scaffold13020 ScafM INDEL 0024.scaffold00093 256575 2 TT .G scaffold13020 ScafM INDEL 0024.scaffold00093 256584 1 C . scaffold13020 ScafM INDEL 0024.scaffold00093 256586 4 CGAC .... scaffold13020 ScafM SNP 0024.scaffold00093 256603 3 ATG TCT scaffold13020 ScafM SNP 0024.scaffold00093 256610 1 C T scaffold13020 ScafM SNP 0024.scaffold00093 256615 2 TT CG scaffold13020 ScafM SNP 0024.scaffold00093 256638 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256640 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256650 1 A G scaffold13020 ScafM SNP 0024.scaffold00093 256654 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256661 1 C T scaffold13020 ScafM SNP 0024.scaffold00093 256663 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256671 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256693 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256698 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256702 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256704 1 T C scaffold13020 ScafM SNP 0024.scaffold00093 256714 1 C T scaffold13020 ScafM SNP 0024.scaffold00093 256735 1 G A scaffold13020 ScafM SNP 0024.scaffold00093 256759 1 A C scaffold13020 ScafM SNP 0024.scaffold00093 256762 1 T A scaffold13020 ScafM SNP 0024.scaffold00093 266117 1 G A scaffold33053 ScafM SNP 0024.scaffold00093 266142 1 C A scaffold33053 ScafM SNP 0024.scaffold00093 266161 1 C A scaffold33053 ScafM SNP 0024.scaffold00093 266198 1 G C scaffold33053 ScafM SNP 0024.scaffold00093 275956 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 275982 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 276007 1 T C scaffold21900 ScafM INDEL 0024.scaffold00093 276012 1 . C scaffold21900 ScafM INDEL 0024.scaffold00093 276013 1 . C scaffold21900 ScafM SNP 0024.scaffold00093 276053 1 T C scaffold21900 ScafM SNP 0024.scaffold00093 276063 1 A T scaffold21900 ScafM INDEL 0024.scaffold00093 276071 1 T . scaffold21900 ScafM INDEL 0024.scaffold00093 276076 1 T . scaffold21900 ScafM SNP 0024.scaffold00093 276099 1 T C scaffold21900 ScafM INDEL 0024.scaffold00093 276113 1 . G scaffold21900 ScafM SNP 0024.scaffold00093 276136 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 276141 1 C G scaffold21900 ScafM SNP 0024.scaffold00093 276144 1 T C scaffold21900 ScafM SNP 0024.scaffold00093 276151 1 C A scaffold21900 ScafM INDEL 0024.scaffold00093 276190 3 ... ATT scaffold21900 ScafM SNP 0024.scaffold00093 276192 1 C A scaffold21900 ScafM INDEL 0024.scaffold00093 276193 1 . C scaffold21900 ScafM INDEL 0024.scaffold00093 276198 1 . G scaffold21900 ScafM SNP 0024.scaffold00093 276217 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 276232 1 T A scaffold21900 ScafM SNP 0024.scaffold00093 276243 1 A T scaffold21900 ScafM SNP 0024.scaffold00093 276252 1 A T scaffold21900 ScafM INDEL 0024.scaffold00093 276259 1 . T scaffold21900 ScafM SNP 0024.scaffold00093 276267 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 276272 1 C G scaffold21900 ScafM SNP 0024.scaffold00093 276276 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 276279 1 T C scaffold21900 ScafM INDEL 0024.scaffold00093 276291 4 GATG .... scaffold21900 ScafM SNP 0024.scaffold00093 276316 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 276350 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 276357 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 276376 1 A C scaffold21900 ScafM INDEL 0024.scaffold00093 276403 8 ........ GTTCAAAT scaffold21900 ScafM SNP 0024.scaffold00093 276421 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 276427 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 276430 1 A T scaffold21900 ScafM SNP 0024.scaffold00093 276436 1 T C scaffold21900 ScafM SNP 0024.scaffold00093 276441 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 276458 1 T G scaffold21900 ScafM SNP 0024.scaffold00093 276464 1 T C scaffold21900 ScafM SNP 0024.scaffold00093 277073 1 T A scaffold21900 ScafM SNP 0024.scaffold00093 277082 1 G A scaffold21900 ScafM INDEL 0024.scaffold00093 277105 1 A . scaffold21900 ScafM SNP 0024.scaffold00093 277120 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 277123 3 CCG ATA scaffold21900 ScafM SNP 0024.scaffold00093 277128 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 277164 2 TC AT scaffold21900 ScafM SNP 0024.scaffold00093 277183 1 T G scaffold21900 ScafM SNP 0024.scaffold00093 277192 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 277206 1 A T scaffold21900 ScafM SNP 0024.scaffold00093 277210 1 T G scaffold21900 ScafM SNP 0024.scaffold00093 277229 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 277250 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 277275 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 277291 1 G A scaffold21900 ScafM SNP 0024.scaffold00093 277296 1 C T scaffold21900 ScafM SNP 0024.scaffold00093 277345 1 A G scaffold21900 ScafM SNP 0024.scaffold00093 279002 1 T C scaffold2804 ScafM INDEL 0024.scaffold00093 279019 2 GC .. scaffold2804 ScafM SNP 0024.scaffold00093 279036 1 G A scaffold2804 ScafM INDEL 0024.scaffold00093 279157 1 . G scaffold2804 ScafM SNP 0024.scaffold00093 279201 1 T C scaffold2804 ScafM SNP 0024.scaffold00093 279223 1 G C scaffold2804 ScafM SNP 0024.scaffold00093 279231 1 A G scaffold2804 ScafM SNP 0024.scaffold00093 279239 1 C T scaffold2804 ScafM SNP 0024.scaffold00093 280050 1 C T scaffold744 Both SNP 0024.scaffold00093 280077 1 C T scaffold744 ScafM SNP 0024.scaffold00093 280166 1 G A scaffold744 ReadM SNP 0024.scaffold00093 280178 1 C T - ReadM SNP 0024.scaffold00093 280313 1 T G - ReadM SNP 0024.scaffold00093 280321 1 C T - ScafM SNP 0024.scaffold00093 281522 1 A G scaffold21900 ScafM INDEL 0024.scaffold00093 281525 2 .. TA scaffold21900 ScafM INDEL 0024.scaffold00093 281660 2 .. AA scaffold21900 ScafM SNP 0024.scaffold00093 281865 1 G T scaffold21900 Both SNP 0024.scaffold00093 282018 1 T C scaffold21900 Both SNP 0024.scaffold00093 282051 1 G C scaffold21900 ScafM SNP 0024.scaffold00093 282076 2 GA AG scaffold21900 Both SNP 0024.scaffold00093 282123 1 C T scaffold21900 Both SNP 0024.scaffold00093 282294 1 A C scaffold21900 Both SNP 0024.scaffold00093 283096 1 T G scaffold21900 ScafM INDEL 0024.scaffold00093 283114 15 TGTAATATAGTGCGG ............... scaffold21900 ScafM INDEL 0024.scaffold00093 283131 1 C . scaffold21900 ScafM INDEL 0024.scaffold00093 283136 1 A . scaffold21900 ScafM SNP 0024.scaffold00093 284216 1 G C scaffold21900 Both SNP 0024.scaffold00093 285092 1 A C scaffold21900 Both SNP 0024.scaffold00093 285224 1 A G scaffold21900 Both SNP 0024.scaffold00093 285245 1 G C scaffold21900 Both SNP 0024.scaffold00093 285269 1 A C scaffold21900 Both SNP 0024.scaffold00093 285336 1 A C scaffold21900 ScafM SNP 0024.scaffold00093 285374 1 T G scaffold21900 Both SNP 0024.scaffold00093 285454 1 A G scaffold21900 ReadM SNP 0024.scaffold00093 285860 1 A T - ReadM SNP 0024.scaffold00093 285980 1 A C - ReadM SNP 0024.scaffold00093 286263 1 A G - ReadM SNP 0024.scaffold00093 286329 1 T A - ReadM SNP 0024.scaffold00093 287112 1 T C - Both SNP 0024.scaffold00093 288199 1 C A scaffold21900 ReadM SNP 0024.scaffold00093 288319 1 C A - ReadM SNP 0024.scaffold00093 288335 1 A G - ReadM SNP 0024.scaffold00093 288549 1 A G - ScafM INDEL 0024.scaffold00093 288678 3 ... TTT scaffold21900 Both SNP 0024.scaffold00093 288754 1 G C scaffold21900 ScafM INDEL 0024.scaffold00093 288878 4 AAAA .... scaffold21900 ScafM SNP 0024.scaffold00093 288883 1 A T scaffold21900 ScafM SNP 0024.scaffold00093 289101 1 A G scaffold21900 ReadM SNP 0024.scaffold00093 290235 1 G A - ReadM SNP 0024.scaffold00093 290275 1 T C - ReadM SNP 0024.scaffold00093 290504 1 T C - ReadM SNP 0024.scaffold00093 290662 1 C T - ReadM SNP 0024.scaffold00093 290872 1 G C - ReadM SNP 0024.scaffold00093 291106 1 A G - ReadM SNP 0024.scaffold00093 291178 1 A G - Both SNP 0024.scaffold00093 291741 1 T C scaffold8229 Both INDEL 0024.scaffold00093 291767 1 . A scaffold8229 ReadM SNP 0024.scaffold00093 292637 1 T C - ReadM SNP 0024.scaffold00093 292674 1 A C - ReadM INDEL 0024.scaffold00093 292801 1 A . - ReadM SNP 0024.scaffold00093 292889 1 G A - Both SNP 0024.scaffold00093 293156 1 T A scaffold8229 Both SNP 0024.scaffold00093 293175 1 T G scaffold8229 Both SNP 0024.scaffold00093 293291 1 G A scaffold8229 Both SNP 0024.scaffold00093 293358 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 293470 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 293586 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 293623 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 293765 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 293776 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 293821 1 G A - ScafM SNP 0024.scaffold00093 294088 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 294160 1 T C scaffold8229 Both SNP 0024.scaffold00093 294464 1 C A scaffold8229 ReadM SNP 0024.scaffold00093 294595 1 T G - Both INDEL 0024.scaffold00093 294720 2 AA .. scaffold8229 ScafM SNP 0024.scaffold00093 294936 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 294939 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 294951 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 294960 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 294992 2 CT AA scaffold8229 ScafM INDEL 0024.scaffold00093 295006 1 A . scaffold8229 ScafM INDEL 0024.scaffold00093 295016 3 ... AAG scaffold8229 Both SNP 0024.scaffold00093 295176 1 G A scaffold8229 Both SNP 0024.scaffold00093 295326 1 C T scaffold8229 Both SNP 0024.scaffold00093 295417 1 A T scaffold8229 Both SNP 0024.scaffold00093 295450 1 G A scaffold8229 Both SNP 0024.scaffold00093 295619 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 295744 1 T A scaffold8229 Both INDEL 0024.scaffold00093 295799 1 A . scaffold8229 Both SNP 0024.scaffold00093 295807 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 295816 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 295819 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 295823 2 AT GC scaffold8229 ScafM SNP 0024.scaffold00093 295836 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 295844 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 295867 3 TTC ACA scaffold8229 ScafM SNP 0024.scaffold00093 295885 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 295891 2 GG AA scaffold8229 ScafM SNP 0024.scaffold00093 295896 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 295909 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 295919 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 295930 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 295936 11 ACTATTACTTA ........... scaffold8229 ScafM SNP 0024.scaffold00093 295957 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 295969 2 TC GT scaffold8229 ScafM SNP 0024.scaffold00093 295972 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 295997 19 TCGTAGGTAAACATAATTT ................... scaffold8229 ScafM INDEL 0024.scaffold00093 296019 1 C . scaffold8229 ScafM SNP 0024.scaffold00093 296048 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 296058 1 C G scaffold8229 ScafM SNP 0024.scaffold00093 296099 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 296109 1 C A scaffold8229 ScafM SNP 0024.scaffold00093 296112 1 C A scaffold8229 ScafM SNP 0024.scaffold00093 296199 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 296245 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 296253 1 G A scaffold8229 ScafM INDEL 0024.scaffold00093 296375 5 TTTTT ..... scaffold8229 ScafM SNP 0024.scaffold00093 296381 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 296396 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 296447 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 296450 2 GT .. scaffold8229 ScafM SNP 0024.scaffold00093 296457 1 G A scaffold8229 Both SNP 0024.scaffold00093 296557 1 G A scaffold8229 Both INDEL 0024.scaffold00093 296570 1 T . scaffold8229 ScafM INDEL 0024.scaffold00093 296622 5 AAAAA .TTTT scaffold8229 ScafM SNP 0024.scaffold00093 296628 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 296652 1 T A - ReadM INDEL 0024.scaffold00093 296671 1 . A - ReadM SNP 0024.scaffold00093 296754 1 T G - ReadM SNP 0024.scaffold00093 296835 1 A G - ReadM INDEL 0024.scaffold00093 298783 1 T . - ReadM INDEL 0024.scaffold00093 299203 1 . A - Both SNP 0024.scaffold00093 299217 1 T G scaffold8229 Both SNP 0024.scaffold00093 299414 1 T C scaffold8229 Both SNP 0024.scaffold00093 299468 1 A C scaffold8229 Both SNP 0024.scaffold00093 299507 1 G A scaffold8229 Both SNP 0024.scaffold00093 299762 1 T C scaffold8229 ReadM SNP 0024.scaffold00093 300230 1 C T - Both SNP 0024.scaffold00093 300496 1 A T scaffold8229 Both SNP 0024.scaffold00093 300627 1 T A scaffold8229 ReadM INDEL 0024.scaffold00093 301190 2 .. TT - ReadM SNP 0024.scaffold00093 301205 1 T G - ReadM SNP 0024.scaffold00093 301300 1 C G - ReadM SNP 0024.scaffold00093 301401 1 G A - ReadM SNP 0024.scaffold00093 301489 1 G A - ReadM SNP 0024.scaffold00093 301528 1 G A - Both SNP 0024.scaffold00093 301624 1 G T scaffold8229 Both SNP 0024.scaffold00093 301688 1 C T scaffold8229 Both SNP 0024.scaffold00093 301745 1 G A scaffold8229 Both SNP 0024.scaffold00093 301762 1 G A scaffold8229 Both SNP 0024.scaffold00093 301874 1 C A scaffold8229 ReadM SNP 0024.scaffold00093 302101 1 T G - ReadM SNP 0024.scaffold00093 302184 1 A G - ReadM SNP 0024.scaffold00093 302824 1 C T - ReadM SNP 0024.scaffold00093 302967 1 T C - ReadM SNP 0024.scaffold00093 303366 1 T C - ReadM SNP 0024.scaffold00093 303452 1 G A - ReadM SNP 0024.scaffold00093 303454 1 C A - ReadM SNP 0024.scaffold00093 303459 1 A G - ReadM SNP 0024.scaffold00093 303715 1 G A - ReadM INDEL 0024.scaffold00093 303746 1 A . - ReadM SNP 0024.scaffold00093 303823 1 C T - ReadM INDEL 0024.scaffold00093 303986 1 A . - ReadM INDEL 0024.scaffold00093 304017 1 A . - Both SNP 0024.scaffold00093 304220 1 T C scaffold8229 Both SNP 0024.scaffold00093 304267 1 A G scaffold8229 Both SNP 0024.scaffold00093 304338 1 A G scaffold8229 Both SNP 0024.scaffold00093 304384 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 304580 1 A C scaffold8229 ScafM INDEL 0024.scaffold00093 304867 1 A . scaffold8229 ScafM SNP 0024.scaffold00093 305294 1 A G scaffold8229 ReadM SNP 0024.scaffold00093 306011 1 G A - ReadM SNP 0024.scaffold00093 306110 1 T G - ReadM SNP 0024.scaffold00093 306128 1 G A - ReadM SNP 0024.scaffold00093 306204 1 C T - ScafM INDEL 0024.scaffold00093 306758 1 T . scaffold8229 ScafM SNP 0024.scaffold00093 306803 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 307220 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 307289 1 A G scaffold8229 ScafM INDEL 0024.scaffold00093 307295 3 CTA ... scaffold8229 ScafM SNP 0024.scaffold00093 307496 1 A G scaffold8229 Both SNP 0024.scaffold00093 307526 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 307758 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 307794 1 C A scaffold8229 ScafM SNP 0024.scaffold00093 307819 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 307847 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 307862 1 C G scaffold8229 ScafM SNP 0024.scaffold00093 307884 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 307954 1 T G scaffold8229 Both SNP 0024.scaffold00093 308014 1 A G scaffold8229 ReadM SNP 0024.scaffold00093 309074 1 A C - ReadM SNP 0024.scaffold00093 309329 1 C T - ReadM SNP 0024.scaffold00093 309494 1 T C - ReadM SNP 0024.scaffold00093 309826 1 A C - ReadM SNP 0024.scaffold00093 309916 1 T C - ReadM SNP 0024.scaffold00093 310265 1 G T - ReadM SNP 0024.scaffold00093 310311 1 C T - ReadM SNP 0024.scaffold00093 310723 1 T C - ReadM SNP 0024.scaffold00093 310743 1 C G - ReadM SNP 0024.scaffold00093 310899 1 A G - ReadM SNP 0024.scaffold00093 311074 1 A G - ReadM SNP 0024.scaffold00093 311152 1 C T - ReadM SNP 0024.scaffold00093 311157 1 T G - ReadM SNP 0024.scaffold00093 311254 1 T A - ReadM SNP 0024.scaffold00093 311538 1 C T - ReadM SNP 0024.scaffold00093 311798 1 T A - ReadM SNP 0024.scaffold00093 311805 1 C G - ScafM SNP 0024.scaffold00093 312643 2 TA CT scaffold7826 ScafM SNP 0024.scaffold00093 312770 1 A T scaffold8229 ScafM INDEL 0024.scaffold00093 312920 1 T . scaffold8229 ReadM SNP 0024.scaffold00093 313334 1 G A - ReadM SNP 0024.scaffold00093 313614 1 C T - ReadM SNP 0024.scaffold00093 313981 1 T C - ReadM SNP 0024.scaffold00093 314080 1 G A - ReadM SNP 0024.scaffold00093 314929 1 A T - ReadM SNP 0024.scaffold00093 315085 1 A T - ReadM SNP 0024.scaffold00093 315128 1 G A - ReadM SNP 0024.scaffold00093 315162 1 C T - ReadM SNP 0024.scaffold00093 315372 1 C T - ReadM SNP 0024.scaffold00093 315747 1 T C - ScafM SNP 0024.scaffold00093 315934 2 CA AT scaffold8229 ScafM SNP 0024.scaffold00093 317039 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 317099 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 317188 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 317361 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 317456 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 317512 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 317544 1 A T scaffold8229 ScafM INDEL 0024.scaffold00093 317560 4 .... GGTT scaffold8229 ScafM INDEL 0024.scaffold00093 317563 4 .... GTGA scaffold8229 ScafM INDEL 0024.scaffold00093 317564 2 .. CG scaffold8229 Both SNP 0024.scaffold00093 317643 1 G A scaffold8229 ReadM SNP 0024.scaffold00093 317753 1 A T - Both SNP 0024.scaffold00093 317828 1 T C scaffold8229 Both SNP 0024.scaffold00093 317963 1 A T scaffold8229 ScafM INDEL 0024.scaffold00093 318023 1 . T scaffold8229 ScafM SNP 0024.scaffold00093 318042 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 318058 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 318182 2 CT TG scaffold8229 ReadM SNP 0024.scaffold00093 318350 1 T C - ReadM SNP 0024.scaffold00093 318406 1 G A - ScafM SNP 0024.scaffold00093 318663 1 A T scaffold8229 ScafM INDEL 0024.scaffold00093 318667 3 ..C TAT scaffold8229 Both SNP 0024.scaffold00093 318815 1 C T scaffold8229 Both SNP 0024.scaffold00093 319014 1 C A scaffold8229 Both SNP 0024.scaffold00093 319079 1 G C scaffold8229 Both SNP 0024.scaffold00093 319081 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 319174 1 T . scaffold8229 ReadM SNP 0024.scaffold00093 319257 1 C T - ReadM SNP 0024.scaffold00093 319260 1 T G - Both SNP 0024.scaffold00093 319500 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 319684 1 A G scaffold8229 Both SNP 0024.scaffold00093 319796 1 A T scaffold8229 Both SNP 0024.scaffold00093 319898 1 G A scaffold8229 Both SNP 0024.scaffold00093 319988 1 A C scaffold8229 Both SNP 0024.scaffold00093 319990 1 G C scaffold8229 Both SNP 0024.scaffold00093 320016 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 320245 1 T A scaffold8229 Both SNP 0024.scaffold00093 320438 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 320531 1 G A scaffold8229 ReadM SNP 0024.scaffold00093 320615 1 A T - ReadM INDEL 0024.scaffold00093 320784 1 . A - ScafM SNP 0024.scaffold00093 321512 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 321610 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 321693 1 C G scaffold8229 Both SNP 0024.scaffold00093 321779 1 T C scaffold8229 ReadM SNP 0024.scaffold00093 321922 1 A G - ReadM SNP 0024.scaffold00093 321960 1 C T - ReadM SNP 0024.scaffold00093 322027 1 C T - ScafM SNP 0024.scaffold00093 323369 1 G C scaffold8229 Both SNP 0024.scaffold00093 323837 1 T C scaffold8229 ReadM SNP 0024.scaffold00093 324262 1 C T - ReadM SNP 0024.scaffold00093 324362 1 A G - ReadM SNP 0024.scaffold00093 324614 1 C T - Both SNP 0024.scaffold00093 324834 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 326117 1 G A - ScafM INDEL 0024.scaffold00093 326200 7 ....... AGGCCCC scaffold8229 ScafM INDEL 0024.scaffold00093 326211 6 ...... CTTCGA scaffold8229 ScafM SNP 0024.scaffold00093 326217 1 A T scaffold8229 ScafM INDEL 0024.scaffold00093 326226 8 ........ TCACAGAT scaffold8229 ScafM INDEL 0024.scaffold00093 326286 5 ..... TCTTT scaffold8229 ScafM SNP 0024.scaffold00093 326289 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 326336 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 326368 1 A G scaffold8229 ScafM INDEL 0024.scaffold00093 326394 2 TT .A scaffold8229 ScafM INDEL 0024.scaffold00093 326440 2 TC .. scaffold8229 ScafM SNP 0024.scaffold00093 326445 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 326458 1 A G scaffold8229 ReadM SNP 0024.scaffold00093 326600 1 T C - ReadM SNP 0024.scaffold00093 326614 1 C A - ReadM SNP 0024.scaffold00093 326748 1 A G - ReadM SNP 0024.scaffold00093 326825 1 T C - ReadM INDEL 0024.scaffold00093 326926 1 . T - ReadM SNP 0024.scaffold00093 326975 1 C T - ReadM SNP 0024.scaffold00093 327021 1 C T - ReadM SNP 0024.scaffold00093 327038 1 C A - ScafM SNP 0024.scaffold00093 328029 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 328362 1 C A scaffold8229 ScafM SNP 0024.scaffold00093 328441 1 T G scaffold8229 Both SNP 0024.scaffold00093 328498 1 A G scaffold8229 Both SNP 0024.scaffold00093 328517 1 T A scaffold8229 Both SNP 0024.scaffold00093 328531 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 328575 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 328577 3 TAA ATC scaffold8229 Both SNP 0024.scaffold00093 328703 1 C T scaffold8229 Both SNP 0024.scaffold00093 328731 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 328756 1 T G scaffold8229 Both INDEL 0024.scaffold00093 328762 1 . A scaffold8229 Both SNP 0024.scaffold00093 328775 1 T C scaffold8229 Both SNP 0024.scaffold00093 328923 1 C A scaffold8229 Both SNP 0024.scaffold00093 329072 1 T A scaffold8229 Both SNP 0024.scaffold00093 329139 1 A G scaffold8229 Both SNP 0024.scaffold00093 329201 1 C T scaffold8229 ScafM INDEL 0024.scaffold00093 329223 19 ................... ATATGTTCTTAGTTGCAAA scaffold8229 Both SNP 0024.scaffold00093 329315 1 T C scaffold8229 Both SNP 0024.scaffold00093 329445 1 C T scaffold8229 Both SNP 0024.scaffold00093 329529 1 C T scaffold8229 Both SNP 0024.scaffold00093 329584 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 329900 1 A G - Both SNP 0024.scaffold00093 329960 1 G T scaffold8229 Both SNP 0024.scaffold00093 330203 1 T G scaffold8229 Both SNP 0024.scaffold00093 330299 1 A T scaffold8229 Both SNP 0024.scaffold00093 330434 1 T C scaffold8229 Both SNP 0024.scaffold00093 330455 1 T C scaffold8229 Both SNP 0024.scaffold00093 330587 1 T G scaffold8229 ScafM INDEL 0024.scaffold00093 330672 2 GT .. scaffold8229 ScafM INDEL 0024.scaffold00093 330690 4 .... TATT scaffold8229 Both SNP 0024.scaffold00093 330704 1 A T scaffold8229 Both SNP 0024.scaffold00093 330902 1 T C scaffold8229 Both SNP 0024.scaffold00093 331110 1 A T scaffold8229 Both SNP 0024.scaffold00093 331135 1 T C scaffold8229 Both SNP 0024.scaffold00093 331438 1 A G scaffold8229 Both SNP 0024.scaffold00093 331459 1 T C scaffold8229 Both SNP 0024.scaffold00093 331905 2 AT GC scaffold8229 Both SNP 0024.scaffold00093 332444 1 T A scaffold8229 Both SNP 0024.scaffold00093 332476 1 T C scaffold8229 Both SNP 0024.scaffold00093 332515 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 332609 2 TC CA scaffold8229 Both SNP 0024.scaffold00093 332645 1 C T scaffold8229 Both SNP 0024.scaffold00093 332681 1 T C scaffold8229 Both SNP 0024.scaffold00093 332698 1 C T scaffold8229 Both SNP 0024.scaffold00093 332726 1 A C scaffold8229 Both SNP 0024.scaffold00093 332741 1 A G scaffold8229 Both SNP 0024.scaffold00093 332810 1 C G scaffold8229 Both SNP 0024.scaffold00093 333069 1 G T scaffold8229 Both SNP 0024.scaffold00093 333105 1 G A scaffold8229 Both SNP 0024.scaffold00093 333150 1 C T scaffold8229 Both SNP 0024.scaffold00093 333166 1 T C scaffold8229 Both SNP 0024.scaffold00093 333259 1 T C scaffold8229 Both INDEL 0024.scaffold00093 333270 1 . C scaffold8229 ScafM INDEL 0024.scaffold00093 333290 1 . A scaffold8229 ScafM INDEL 0024.scaffold00093 333291 2 .. CC scaffold8229 ScafM INDEL 0024.scaffold00093 333292 5 ..... GAGAG scaffold8229 Both INDEL 0024.scaffold00093 333324 1 . T scaffold8229 Both INDEL 0024.scaffold00093 333415 2 GA .. scaffold8229 Both SNP 0024.scaffold00093 333523 1 T C scaffold8229 Both SNP 0024.scaffold00093 333547 1 T A scaffold8229 Both INDEL 0024.scaffold00093 333646 1 C . scaffold8229 ScafM SNP 0024.scaffold00093 333648 1 T A scaffold8229 Both SNP 0024.scaffold00093 334251 1 C T scaffold8229 Both SNP 0024.scaffold00093 334356 1 G A scaffold8229 Both SNP 0024.scaffold00093 334364 1 A G scaffold8229 Both SNP 0024.scaffold00093 334402 1 G T scaffold8229 Both SNP 0024.scaffold00093 334534 1 G A scaffold8229 Both SNP 0024.scaffold00093 334683 1 G C scaffold8229 Both SNP 0024.scaffold00093 334688 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 334720 1 T . scaffold8229 ScafM SNP 0024.scaffold00093 334722 4 CTTT AGGA scaffold8229 ScafM SNP 0024.scaffold00093 334917 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 335022 2 GA AG scaffold8229 Both INDEL 0024.scaffold00093 335345 1 . T scaffold8229 ScafM SNP 0024.scaffold00093 335352 1 A G scaffold8229 Both SNP 0024.scaffold00093 336156 1 C T scaffold8229 Both SNP 0024.scaffold00093 336290 1 G T scaffold8229 Both SNP 0024.scaffold00093 336324 1 T G scaffold8229 Both SNP 0024.scaffold00093 336348 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 336363 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 336374 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 336376 1 C T scaffold8229 Both SNP 0024.scaffold00093 336422 1 T G scaffold8229 Both SNP 0024.scaffold00093 336432 1 A T scaffold8229 Both SNP 0024.scaffold00093 336679 1 C T scaffold8229 ScafM INDEL 0024.scaffold00093 336747 3 ..G CTT scaffold8229 ScafM SNP 0024.scaffold00093 336751 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 336771 1 T A scaffold8229 Both SNP 0024.scaffold00093 337056 1 C G scaffold8229 Both SNP 0024.scaffold00093 337194 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 337314 1 C T - Both SNP 0024.scaffold00093 337601 1 G T scaffold8229 Both SNP 0024.scaffold00093 337653 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 337790 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 337793 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 337795 1 A T scaffold8229 Both SNP 0024.scaffold00093 337844 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 338173 3 TTT ... scaffold8229 Both SNP 0024.scaffold00093 338206 1 T C scaffold8229 Both INDEL 0024.scaffold00093 338269 2 .. AA scaffold8229 ScafM INDEL 0024.scaffold00093 338338 2 TT .. scaffold8229 ReadM SNP 0024.scaffold00093 338479 1 A G - ScafM SNP 0024.scaffold00093 338700 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 338720 1 C A scaffold8229 ScafM INDEL 0024.scaffold00093 338748 8 ........ GACTCCCT scaffold8229 ScafM INDEL 0024.scaffold00093 338787 4 .... GAAG scaffold8229 ScafM INDEL 0024.scaffold00093 338788 2 .. CC scaffold8229 Both SNP 0024.scaffold00093 338866 1 A G scaffold8229 Both SNP 0024.scaffold00093 339131 1 G A scaffold8229 Both SNP 0024.scaffold00093 339351 1 T C scaffold8229 Both SNP 0024.scaffold00093 339377 1 C T scaffold8229 ScafM INDEL 0024.scaffold00093 339438 16 GCTGGGTATCAAATAT ................ scaffold8229 ReadM SNP 0024.scaffold00093 339658 1 G A - ReadM SNP 0024.scaffold00093 339814 1 C A - ReadM SNP 0024.scaffold00093 339899 1 C A - Both SNP 0024.scaffold00093 339970 1 T C scaffold8229 ReadM SNP 0024.scaffold00093 340225 1 G A - ReadM SNP 0024.scaffold00093 340333 1 T G - ReadM SNP 0024.scaffold00093 340454 1 G A - ReadM SNP 0024.scaffold00093 340607 1 T A - ScafM SNP 0024.scaffold00093 341744 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 341773 1 C G scaffold8229 Both SNP 0024.scaffold00093 341985 1 C T scaffold8229 Both SNP 0024.scaffold00093 342356 1 G A scaffold8229 Both SNP 0024.scaffold00093 342639 1 G T scaffold8229 Both SNP 0024.scaffold00093 343017 1 A T scaffold8229 Both SNP 0024.scaffold00093 343372 1 A T scaffold8229 Both SNP 0024.scaffold00093 343534 1 T A scaffold8229 Both SNP 0024.scaffold00093 343773 1 C T scaffold8229 Both INDEL 0024.scaffold00093 343883 1 . T scaffold8229 Both SNP 0024.scaffold00093 344070 1 G T scaffold8229 Both SNP 0024.scaffold00093 344092 1 G A scaffold8229 Both SNP 0024.scaffold00093 344102 1 T A scaffold8229 Both SNP 0024.scaffold00093 344270 1 G T scaffold8229 Both SNP 0024.scaffold00093 344428 1 C T scaffold8229 Both INDEL 0024.scaffold00093 344688 2 .. AA scaffold8229 Both SNP 0024.scaffold00093 344888 1 A G scaffold8229 Both SNP 0024.scaffold00093 344981 1 A T scaffold8229 Both SNP 0024.scaffold00093 345154 1 G A scaffold8229 Both SNP 0024.scaffold00093 345618 1 G A scaffold8229 Both SNP 0024.scaffold00093 345648 1 A G scaffold8229 Both SNP 0024.scaffold00093 345728 1 C A scaffold8229 Both SNP 0024.scaffold00093 345852 1 T G scaffold8229 Both SNP 0024.scaffold00093 346252 1 C A scaffold8229 Both SNP 0024.scaffold00093 346416 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 346763 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 346766 3 AAC TTA scaffold8229 ScafM INDEL 0024.scaffold00093 346809 8 ........ AACTGTTC scaffold8229 Both SNP 0024.scaffold00093 346918 1 C T scaffold8229 Both SNP 0024.scaffold00093 346979 1 G C scaffold8229 Both SNP 0024.scaffold00093 346986 1 G C scaffold8229 Both INDEL 0024.scaffold00093 347496 2 .. GG scaffold8229 ScafM SNP 0024.scaffold00093 347662 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 347687 2 TT .. scaffold8229 Both SNP 0024.scaffold00093 347711 1 C T scaffold8229 Both SNP 0024.scaffold00093 347733 1 T G scaffold8229 Both SNP 0024.scaffold00093 347752 1 C T scaffold8229 Both SNP 0024.scaffold00093 347821 1 C T scaffold8229 Both SNP 0024.scaffold00093 347883 1 G C scaffold8229 ReadM SNP 0024.scaffold00093 348066 1 T C - Both SNP 0024.scaffold00093 348238 1 A C scaffold8229 Both SNP 0024.scaffold00093 348268 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 348338 1 T C - ScafM SNP 0024.scaffold00093 348800 1 A T scaffold12606 ReadM SNP 0024.scaffold00093 350526 1 A C - ReadM SNP 0024.scaffold00093 350952 1 T C - ReadM SNP 0024.scaffold00093 351058 1 G A - ReadM SNP 0024.scaffold00093 351311 1 C T - ScafM SNP 0024.scaffold00093 354913 1 T G scaffold8229 Both SNP 0024.scaffold00093 354938 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 354978 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 355036 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 355045 1 C T scaffold8229 ScafM INDEL 0024.scaffold00093 355052 1 . T scaffold8229 ScafM SNP 0024.scaffold00093 355090 1 A C scaffold8229 Both SNP 0024.scaffold00093 355147 1 G A scaffold8229 Both SNP 0024.scaffold00093 355193 1 C T scaffold8229 Both SNP 0024.scaffold00093 355210 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 355239 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 355448 1 C T - Both SNP 0024.scaffold00093 355485 1 T A scaffold8229 Both SNP 0024.scaffold00093 355574 1 T G scaffold8229 ScafM INDEL 0024.scaffold00093 355579 1 C . scaffold8229 ScafM SNP 0024.scaffold00093 355591 1 G A scaffold8229 ReadM SNP 0024.scaffold00093 357659 1 G C - ReadM SNP 0024.scaffold00093 357733 1 A T - ReadM SNP 0024.scaffold00093 357771 1 C A - ReadM SNP 0024.scaffold00093 357826 1 A G - ReadM SNP 0024.scaffold00093 357843 1 T G - ReadM SNP 0024.scaffold00093 357862 1 A T - ReadM SNP 0024.scaffold00093 357968 1 C T - ReadM SNP 0024.scaffold00093 358042 1 G A - ReadM INDEL 0024.scaffold00093 358061 1 . T - ReadM SNP 0024.scaffold00093 358149 1 C T - ReadM SNP 0024.scaffold00093 358153 1 G T - ReadM SNP 0024.scaffold00093 358174 1 A G - ReadM SNP 0024.scaffold00093 358268 1 G A - ReadM SNP 0024.scaffold00093 358282 1 A G - ReadM SNP 0024.scaffold00093 358408 1 T G - ReadM SNP 0024.scaffold00093 358417 1 C T - Both SNP 0024.scaffold00093 358522 1 C A scaffold8229 Both SNP 0024.scaffold00093 358544 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 358571 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 358586 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 358588 1 T C scaffold8229 Both SNP 0024.scaffold00093 358621 1 G T scaffold8229 ReadM SNP 0024.scaffold00093 358698 1 G A - ReadM SNP 0024.scaffold00093 358967 1 G A - Both SNP 0024.scaffold00093 359034 1 A G scaffold8229 Both SNP 0024.scaffold00093 359068 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 359291 1 A T - ReadM SNP 0024.scaffold00093 359310 1 T C - ReadM SNP 0024.scaffold00093 359355 1 C T - ReadM SNP 0024.scaffold00093 359400 1 T G - ReadM SNP 0024.scaffold00093 359404 1 T C - ReadM INDEL 0024.scaffold00093 359464 2 AT .. - ScafM SNP 0024.scaffold00093 360880 1 T C scaffold6 ScafM SNP 0024.scaffold00093 360925 1 C T scaffold6 ScafM SNP 0024.scaffold00093 360940 1 T C scaffold6 ScafM SNP 0024.scaffold00093 360946 1 T G scaffold6 Both SNP 0024.scaffold00093 360950 1 T G scaffold6 ScafM SNP 0024.scaffold00093 360960 1 G A scaffold6 ScafM SNP 0024.scaffold00093 360972 1 G C scaffold6 ScafM SNP 0024.scaffold00093 361025 1 T C scaffold6 ScafM SNP 0024.scaffold00093 361031 1 A C scaffold6 ScafM SNP 0024.scaffold00093 361063 1 T C scaffold6 ReadM SNP 0024.scaffold00093 361066 1 G A - ReadM SNP 0024.scaffold00093 361108 1 T A - ScafM SNP 0024.scaffold00093 361117 1 T A scaffold6 ScafM SNP 0024.scaffold00093 361124 1 G T scaffold6 ScafM SNP 0024.scaffold00093 361138 1 G A scaffold6 ScafM SNP 0024.scaffold00093 361155 1 G A scaffold6 ScafM SNP 0024.scaffold00093 362208 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 362221 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 362256 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 362283 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 362305 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 362356 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 362388 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 362434 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 362478 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 362503 1 C G scaffold8229 ScafM INDEL 0024.scaffold00093 362595 11 ........... TTTGATCCTAT scaffold8229 Both SNP 0024.scaffold00093 362686 1 A T scaffold8229 Both SNP 0024.scaffold00093 362744 1 A G scaffold8229 Both SNP 0024.scaffold00093 362751 1 A C scaffold8229 Both SNP 0024.scaffold00093 362844 1 G A scaffold8229 Both SNP 0024.scaffold00093 362882 1 C T scaffold8229 Both SNP 0024.scaffold00093 362913 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 362968 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 362970 1 A T scaffold8229 Both SNP 0024.scaffold00093 363009 1 A T scaffold8229 Both SNP 0024.scaffold00093 363023 1 G C scaffold8229 Both SNP 0024.scaffold00093 363095 1 C T scaffold8229 ReadM SNP 0024.scaffold00093 363226 1 G T - ReadM SNP 0024.scaffold00093 363284 1 C G - ReadM SNP 0024.scaffold00093 363310 1 G A - Both SNP 0024.scaffold00093 363493 1 G A scaffold8229 Both SNP 0024.scaffold00093 363505 1 C T scaffold8229 Both SNP 0024.scaffold00093 363625 1 A G scaffold8229 ReadM SNP 0024.scaffold00093 363730 1 T G - ReadM SNP 0024.scaffold00093 363786 1 A G - ReadM SNP 0024.scaffold00093 363800 1 G A - ReadM SNP 0024.scaffold00093 363941 1 A C - ReadM SNP 0024.scaffold00093 363965 1 A G - ReadM SNP 0024.scaffold00093 364004 1 A G - ReadM SNP 0024.scaffold00093 364089 1 A G - ReadM SNP 0024.scaffold00093 364144 1 A G - Both SNP 0024.scaffold00093 364293 1 G C scaffold8229 Both SNP 0024.scaffold00093 364297 1 G T scaffold8229 Both SNP 0024.scaffold00093 364394 1 T C scaffold8229 Both SNP 0024.scaffold00093 364397 1 T C scaffold8229 Both SNP 0024.scaffold00093 364447 1 A G scaffold8229 Both SNP 0024.scaffold00093 364503 1 T G scaffold8229 ReadM SNP 0024.scaffold00093 364545 1 C T - ReadM SNP 0024.scaffold00093 364569 1 G A - ReadM SNP 0024.scaffold00093 364601 1 T G - ReadM SNP 0024.scaffold00093 364613 1 A G - ReadM SNP 0024.scaffold00093 364656 1 T A - ReadM SNP 0024.scaffold00093 364696 1 C A - ReadM SNP 0024.scaffold00093 364848 1 A G - ReadM SNP 0024.scaffold00093 364897 1 T C - ReadM SNP 0024.scaffold00093 364952 1 G A - ReadM SNP 0024.scaffold00093 365037 1 C T - ReadM SNP 0024.scaffold00093 365057 1 G A - ReadM SNP 0024.scaffold00093 365061 1 C G - ReadM SNP 0024.scaffold00093 365129 1 C T - ReadM INDEL 0024.scaffold00093 365160 1 A . - ReadM SNP 0024.scaffold00093 365196 1 T C - ReadM SNP 0024.scaffold00093 365201 1 T C - ReadM SNP 0024.scaffold00093 365258 1 G A - Both SNP 0024.scaffold00093 365278 1 T C scaffold8229 Both SNP 0024.scaffold00093 365399 1 G C scaffold8229 Both SNP 0024.scaffold00093 365420 1 G A scaffold8229 Both SNP 0024.scaffold00093 365425 1 C G scaffold8229 Both SNP 0024.scaffold00093 365447 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 365683 1 A G - ReadM SNP 0024.scaffold00093 365771 1 G T - Both SNP 0024.scaffold00093 365794 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 365857 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 365870 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 365877 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 365879 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 365933 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 365937 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 365955 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 365974 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 365994 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 365996 1 G T scaffold8229 Both SNP 0024.scaffold00093 366011 1 T C scaffold8229 Both SNP 0024.scaffold00093 366067 1 G T scaffold8229 ReadM SNP 0024.scaffold00093 366183 1 G A - ReadM SNP 0024.scaffold00093 366451 1 T C - ReadM SNP 0024.scaffold00093 366514 1 A G - ReadM SNP 0024.scaffold00093 366582 1 A G - ReadM SNP 0024.scaffold00093 366599 1 C A - ReadM SNP 0024.scaffold00093 366642 1 C T - ReadM SNP 0024.scaffold00093 366655 1 A T - ReadM SNP 0024.scaffold00093 366717 1 A T - Both SNP 0024.scaffold00093 366783 1 C G scaffold8229 ScafM SNP 0024.scaffold00093 366795 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 366801 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 366830 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 366861 2 AG GC scaffold8229 Both SNP 0024.scaffold00093 366908 1 G A scaffold8229 Both INDEL 0024.scaffold00093 366959 1 . T scaffold8229 Both SNP 0024.scaffold00093 366975 1 A G scaffold8229 Both INDEL 0024.scaffold00093 367001 1 A . scaffold8229 ScafM SNP 0024.scaffold00093 367006 1 G T scaffold8229 Both SNP 0024.scaffold00093 367084 1 A G scaffold8229 Both INDEL 0024.scaffold00093 367103 1 . A scaffold8229 ScafM INDEL 0024.scaffold00093 367124 1 A . scaffold8229 ScafM SNP 0024.scaffold00093 367137 1 A G scaffold8229 Both SNP 0024.scaffold00093 367156 1 G A scaffold8229 Both SNP 0024.scaffold00093 367182 1 C G scaffold8229 Both SNP 0024.scaffold00093 367240 1 A G scaffold8229 Both SNP 0024.scaffold00093 367290 1 T C scaffold8229 Both SNP 0024.scaffold00093 367311 1 G A scaffold8229 Both SNP 0024.scaffold00093 367325 1 A G scaffold8229 Both SNP 0024.scaffold00093 367370 1 T A scaffold8229 Both SNP 0024.scaffold00093 367402 1 C T scaffold8229 Both SNP 0024.scaffold00093 367467 1 A G scaffold8229 Both SNP 0024.scaffold00093 367496 1 C T scaffold8229 Both SNP 0024.scaffold00093 367602 1 T C scaffold8229 Both SNP 0024.scaffold00093 367613 1 G T scaffold8229 Both SNP 0024.scaffold00093 367637 1 T C scaffold8229 ReadM SNP 0024.scaffold00093 367672 1 A C - ReadM SNP 0024.scaffold00093 367751 1 A G - ReadM SNP 0024.scaffold00093 367760 1 G A - Both SNP 0024.scaffold00093 367798 1 A G scaffold8229 Both INDEL 0024.scaffold00093 367843 1 . A scaffold8229 ScafM SNP 0024.scaffold00093 367910 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 367912 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 367936 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 367956 1 G C scaffold8229 ScafM INDEL 0024.scaffold00093 367960 6 TTTTGA ...... scaffold8229 Both SNP 0024.scaffold00093 368031 1 T A scaffold8229 Both SNP 0024.scaffold00093 368142 1 C T scaffold8229 Both SNP 0024.scaffold00093 368198 1 C T scaffold8229 Both SNP 0024.scaffold00093 368205 1 T A scaffold8229 Both SNP 0024.scaffold00093 368244 1 A G scaffold8229 Both SNP 0024.scaffold00093 368293 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 368301 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 368313 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 368319 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 368348 2 .. TG scaffold8229 Both SNP 0024.scaffold00093 368371 1 A G scaffold8229 Both SNP 0024.scaffold00093 368429 1 A C scaffold8229 Both SNP 0024.scaffold00093 368494 1 C T scaffold8229 Both INDEL 0024.scaffold00093 368534 1 A . scaffold8229 ScafM SNP 0024.scaffold00093 368540 1 A T scaffold8229 Both SNP 0024.scaffold00093 368554 1 C A scaffold8229 Both SNP 0024.scaffold00093 368580 1 T G scaffold8229 Both SNP 0024.scaffold00093 368643 1 T C scaffold8229 Both SNP 0024.scaffold00093 368652 1 A G scaffold8229 Both SNP 0024.scaffold00093 368750 1 T C scaffold8229 Both SNP 0024.scaffold00093 368833 1 A C scaffold8229 Both SNP 0024.scaffold00093 368835 1 T C scaffold8229 Both SNP 0024.scaffold00093 368888 1 C A scaffold8229 Both SNP 0024.scaffold00093 368967 1 T A scaffold8229 Both SNP 0024.scaffold00093 369117 1 A T scaffold8229 Both SNP 0024.scaffold00093 369189 1 A G scaffold8229 Both SNP 0024.scaffold00093 369229 2 GC AT scaffold8229 Both SNP 0024.scaffold00093 369383 1 G A scaffold8229 Both SNP 0024.scaffold00093 369394 1 A C scaffold8229 Both SNP 0024.scaffold00093 369405 1 C A scaffold8229 ReadM SNP 0024.scaffold00093 369520 1 C T - Both SNP 0024.scaffold00093 369638 1 T C scaffold8229 Both SNP 0024.scaffold00093 369649 1 C T scaffold8229 Both SNP 0024.scaffold00093 369827 1 C T scaffold8229 Both SNP 0024.scaffold00093 369829 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 369865 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 369891 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 369937 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 369991 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 370194 1 A G - ScafM SNP 0024.scaffold00093 371120 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 371189 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 371193 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 371715 2 TG CA scaffold8229 ScafM SNP 0024.scaffold00093 371737 1 C G scaffold8229 ScafM SNP 0024.scaffold00093 371742 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 371750 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 371759 1 G T scaffold8229 ScafM SNP 0024.scaffold00093 371767 1 C G scaffold8229 ScafM INDEL 0024.scaffold00093 371778 1 . A scaffold8229 ScafM SNP 0024.scaffold00093 371818 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 371824 1 T C scaffold8229 ScafM INDEL 0024.scaffold00093 372193 1 A . scaffold8229 ScafM SNP 0024.scaffold00093 372208 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 372269 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 372343 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 372348 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 372415 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 372432 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 372445 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 372476 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 372511 1 T G scaffold8229 ScafM SNP 0024.scaffold00093 372655 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 372668 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 372672 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 372675 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 372677 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 372700 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 372706 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 372710 1 G C scaffold8229 ScafM SNP 0024.scaffold00093 372787 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 372868 1 A T scaffold8229 ScafM SNP 0024.scaffold00093 373028 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 373087 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 373162 1 A C scaffold8229 ScafM SNP 0024.scaffold00093 373328 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 373443 1 T A scaffold8229 ScafM SNP 0024.scaffold00093 373538 1 A T scaffold8229 ReadM SNP 0024.scaffold00093 374488 1 C A - ReadM SNP 0024.scaffold00093 374551 1 C A - ReadM SNP 0024.scaffold00093 374895 1 T C - ReadM SNP 0024.scaffold00093 374970 1 T C - ReadM SNP 0024.scaffold00093 374976 1 G C - ReadM SNP 0024.scaffold00093 375028 1 A G - ReadM SNP 0024.scaffold00093 375094 1 T G - ReadM SNP 0024.scaffold00093 375111 1 C T - ReadM SNP 0024.scaffold00093 375191 1 C A - ReadM SNP 0024.scaffold00093 375251 1 G A - ReadM SNP 0024.scaffold00093 375287 1 T G - ReadM SNP 0024.scaffold00093 375365 1 C A - ReadM SNP 0024.scaffold00093 375528 1 T G - ReadM SNP 0024.scaffold00093 375697 1 A C - ReadM SNP 0024.scaffold00093 375827 1 T C - ReadM SNP 0024.scaffold00093 375988 1 C G - ReadM SNP 0024.scaffold00093 376117 1 C T - ReadM SNP 0024.scaffold00093 376430 1 C G - ReadM SNP 0024.scaffold00093 376497 1 A G - ReadM SNP 0024.scaffold00093 376524 1 A G - ReadM SNP 0024.scaffold00093 376526 1 C G - ReadM SNP 0024.scaffold00093 376621 1 C G - ReadM SNP 0024.scaffold00093 376706 1 A G - ReadM SNP 0024.scaffold00093 376844 1 G A - ReadM SNP 0024.scaffold00093 376865 1 C T - ReadM SNP 0024.scaffold00093 376940 1 A G - ReadM SNP 0024.scaffold00093 376948 1 A G - ReadM SNP 0024.scaffold00093 376952 1 C A - ReadM SNP 0024.scaffold00093 377102 1 A G - ReadM SNP 0024.scaffold00093 377174 1 T C - ReadM SNP 0024.scaffold00093 377213 1 T A - ReadM SNP 0024.scaffold00093 377270 1 A G - ReadM SNP 0024.scaffold00093 377309 1 C A - ReadM SNP 0024.scaffold00093 377537 1 T A - ScafM SNP 0024.scaffold00093 383184 1 C A scaffold48949 ScafM SNP 0024.scaffold00093 383209 1 C T scaffold48949 ScafM SNP 0024.scaffold00093 383217 1 T C scaffold48949 ScafM SNP 0024.scaffold00093 383219 1 A G scaffold48949 ScafM SNP 0024.scaffold00093 383301 1 A G scaffold48949 ReadM SNP 0024.scaffold00093 383461 1 T A - ReadM SNP 0024.scaffold00093 383510 1 A G - ReadM SNP 0024.scaffold00093 383585 1 T C - ReadM SNP 0024.scaffold00093 383605 1 A G - ReadM SNP 0024.scaffold00093 383665 1 T C - ReadM SNP 0024.scaffold00093 383709 1 C T - ReadM SNP 0024.scaffold00093 383757 1 A C - ReadM SNP 0024.scaffold00093 384819 1 T C - ReadM SNP 0024.scaffold00093 384887 1 C T - ReadM SNP 0024.scaffold00093 384933 1 G A - ReadM SNP 0024.scaffold00093 385061 1 A T - ReadM SNP 0024.scaffold00093 385094 1 A C - ReadM SNP 0024.scaffold00093 385177 1 A G - ReadM SNP 0024.scaffold00093 385333 1 A G - ReadM SNP 0024.scaffold00093 385384 1 C T - ReadM SNP 0024.scaffold00093 385395 1 T C - Both SNP 0024.scaffold00093 385498 1 G A scaffold8229 Both INDEL 0024.scaffold00093 385515 1 T . scaffold8229 ScafM SNP 0024.scaffold00093 385630 1 T C scaffold8229 Both SNP 0024.scaffold00093 385790 1 A C scaffold8229 Both SNP 0024.scaffold00093 385826 1 A G scaffold8229 Both SNP 0024.scaffold00093 385852 1 A G scaffold8229 Both SNP 0024.scaffold00093 385879 1 A T scaffold8229 Both SNP 0024.scaffold00093 385894 1 C T scaffold8229 Both SNP 0024.scaffold00093 385926 1 A T scaffold8229 Both SNP 0024.scaffold00093 385958 1 G A scaffold8229 Both SNP 0024.scaffold00093 386134 1 A G scaffold8229 Both SNP 0024.scaffold00093 386141 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 386225 1 A G scaffold8229 ScafM SNP 0024.scaffold00093 386346 1 A G scaffold8229 Both SNP 0024.scaffold00093 386596 1 G A scaffold8229 Both SNP 0024.scaffold00093 386610 1 T C scaffold8229 ScafM SNP 0024.scaffold00093 386689 1 C T scaffold8229 ScafM SNP 0024.scaffold00093 386704 1 G A scaffold8229 ScafM SNP 0024.scaffold00093 386706 1 A G scaffold8229 ReadM SNP 0024.scaffold00093 415195 1 C T - ReadM SNP 0024.scaffold00093 415264 1 C T - ReadM SNP 0024.scaffold00093 415516 1 C T - ReadM SNP 0024.scaffold00093 415536 1 G A - ReadM SNP 0024.scaffold00093 415663 1 G A - ReadM SNP 0024.scaffold00093 415681 1 A T - ReadM SNP 0024.scaffold00093 415714 1 T G - ReadM SNP 0024.scaffold00093 415749 1 C T - ReadM SNP 0024.scaffold00093 415835 1 A G - ReadM SNP 0024.scaffold00093 415841 1 C T - ReadM INDEL 0024.scaffold00093 415864 2 .. AA - ReadM SNP 0024.scaffold00093 415907 1 G T - ReadM SNP 0024.scaffold00093 416091 1 A G - ReadM INDEL 0024.scaffold00093 416118 1 C . - ReadM SNP 0024.scaffold00093 416164 1 T C - ReadM SNP 0024.scaffold00093 416178 1 G A - ReadM SNP 0024.scaffold00093 416213 1 A G - ReadM SNP 0024.scaffold00093 416299 1 C T - ReadM INDEL 0024.scaffold00093 416308 1 A . - ReadM SNP 0024.scaffold00093 416335 1 C T - ReadM SNP 0024.scaffold00093 416396 1 C A - ReadM INDEL 0024.scaffold00093 416465 1 . A - ReadM SNP 0024.scaffold00093 416517 1 A G - ReadM SNP 0024.scaffold00093 416589 1 G A - ReadM INDEL 0024.scaffold00093 416647 1 C . - ReadM SNP 0024.scaffold00093 416658 1 G A - ReadM SNP 0024.scaffold00093 416702 1 T C - ReadM INDEL 0024.scaffold00093 416713 1 T . - ReadM SNP 0024.scaffold00093 417014 1 G A - Both SNP 0024.scaffold00093 417098 1 A G scaffold1479 Both SNP 0024.scaffold00093 417152 1 T G scaffold1479 ReadM SNP 0024.scaffold00093 417307 1 C T - ReadM SNP 0024.scaffold00093 417321 1 C A - ReadM SNP 0024.scaffold00093 417340 1 A T - ReadM SNP 0024.scaffold00093 417437 1 A G - ReadM SNP 0024.scaffold00093 417471 1 A G - ReadM SNP 0024.scaffold00093 417622 1 A T - ReadM SNP 0024.scaffold00093 417638 1 G A - ReadM SNP 0024.scaffold00093 417687 1 T C - ReadM INDEL 0024.scaffold00093 417754 1 C . - ReadM SNP 0024.scaffold00093 417952 1 A G - ReadM SNP 0024.scaffold00093 417992 1 G A - ReadM SNP 0024.scaffold00093 418025 1 T C - ReadM SNP 0024.scaffold00093 418108 1 T C - ReadM SNP 0024.scaffold00093 418172 1 A G - ReadM SNP 0024.scaffold00093 418198 1 A C - ReadM INDEL 0024.scaffold00093 418266 2 AT .. - ReadM SNP 0024.scaffold00093 418271 1 A G - ReadM SNP 0024.scaffold00093 418360 1 C A - ReadM SNP 0024.scaffold00093 418513 1 T C - ReadM SNP 0024.scaffold00093 418575 1 A T - ReadM SNP 0024.scaffold00093 418599 1 T G - ReadM SNP 0024.scaffold00093 418633 1 T C - ReadM SNP 0024.scaffold00093 418720 1 A T - ReadM SNP 0024.scaffold00093 418726 1 A G - ReadM SNP 0024.scaffold00093 418772 1 A G - ReadM SNP 0024.scaffold00093 418932 1 A G - ReadM SNP 0024.scaffold00093 418940 1 G T - ReadM SNP 0024.scaffold00093 419083 1 G A - ReadM SNP 0024.scaffold00093 419194 1 G A - ReadM INDEL 0024.scaffold00093 419228 1 A . - ScafM SNP 0024.scaffold00093 420538 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 420563 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 420608 1 C G scaffold1479 ScafM SNP 0024.scaffold00093 420627 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 420667 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 420675 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 420736 1 A C scaffold1479 ScafM SNP 0024.scaffold00093 420790 1 G T scaffold1479 ScafM SNP 0024.scaffold00093 420812 1 A G scaffold1479 ScafM INDEL 0024.scaffold00093 420951 3 ... TTT scaffold1479 ScafM SNP 0024.scaffold00093 420994 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 421007 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 421031 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 421080 1 G A scaffold1479 ScafM INDEL 0024.scaffold00093 421086 1 T . scaffold1479 ReadM SNP 0024.scaffold00093 423474 1 A G - ReadM SNP 0024.scaffold00093 423592 1 A G - Both SNP 0024.scaffold00093 423624 1 T A scaffold1479 Both SNP 0024.scaffold00093 423694 1 A G scaffold1479 Both INDEL 0024.scaffold00093 423730 1 T . scaffold1479 ScafM SNP 0024.scaffold00093 423823 2 AC TT scaffold1479 Both SNP 0024.scaffold00093 423832 1 A G scaffold1479 Both SNP 0024.scaffold00093 423886 1 G T scaffold1479 Both SNP 0024.scaffold00093 423924 1 T C scaffold1479 Both SNP 0024.scaffold00093 424028 1 T C scaffold1479 Both SNP 0024.scaffold00093 424050 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 424274 1 G T scaffold1479 ReadM SNP 0024.scaffold00093 425012 1 T C - ScafM SNP 0024.scaffold00093 425260 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 425288 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 425301 1 T C scaffold1479 ReadM SNP 0024.scaffold00093 425393 1 C A - ScafM SNP 0024.scaffold00093 425544 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 425593 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 425669 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 425708 1 A C scaffold1479 ScafM SNP 0024.scaffold00093 425710 1 G T scaffold1479 ScafM SNP 0024.scaffold00093 425743 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 425773 1 C A scaffold1479 ScafM INDEL 0024.scaffold00093 425787 1 A . scaffold1479 ScafM SNP 0024.scaffold00093 425795 1 T A scaffold1479 ScafM INDEL 0024.scaffold00093 425821 1 . A scaffold1479 ScafM SNP 0024.scaffold00093 426033 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 426036 1 T A scaffold1479 ScafM SNP 0024.scaffold00093 426066 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 426088 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 426092 1 G A scaffold1479 ScafM INDEL 0024.scaffold00093 426189 1 A . scaffold1479 ScafM SNP 0024.scaffold00093 426266 1 G C scaffold1479 ScafM SNP 0024.scaffold00093 426280 1 C A scaffold1479 ScafM INDEL 0024.scaffold00093 430020 1 G . scaffold12460 ScafM INDEL 0024.scaffold00093 430068 1 T . scaffold12460 ScafM INDEL 0024.scaffold00093 430078 1 G . scaffold12460 ScafM SNP 0024.scaffold00093 431059 1 T G scaffold1479 ScafM SNP 0024.scaffold00093 431125 1 A G scaffold1479 ScafM INDEL 0024.scaffold00093 431127 1 . A scaffold1479 ScafM SNP 0024.scaffold00093 431142 1 T G scaffold1479 ScafM SNP 0024.scaffold00093 431209 1 C T scaffold1479 ScafM INDEL 0024.scaffold00093 431237 1 A . scaffold1479 ScafM SNP 0024.scaffold00093 431250 2 AC CT scaffold1479 ScafM SNP 0024.scaffold00093 431282 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 431307 1 A G scaffold1479 ScafM INDEL 0024.scaffold00093 431354 1 T . scaffold1479 Both SNP 0024.scaffold00093 431668 1 G C scaffold1479 Both SNP 0024.scaffold00093 431683 1 C G scaffold1479 Both SNP 0024.scaffold00093 431695 1 T G scaffold1479 ReadM SNP 0024.scaffold00093 431958 1 C T - ReadM SNP 0024.scaffold00093 431962 2 GT AA - ReadM SNP 0024.scaffold00093 432035 1 T C - ReadM INDEL 0024.scaffold00093 432126 1 A . - ReadM SNP 0024.scaffold00093 432196 1 T C - Both INDEL 0024.scaffold00093 432403 1 T . scaffold1479 Both SNP 0024.scaffold00093 432475 1 C A scaffold1479 Both SNP 0024.scaffold00093 432503 1 G C scaffold1479 Both SNP 0024.scaffold00093 432636 1 C G scaffold1479 ReadM INDEL 0024.scaffold00093 432882 1 . T - ReadM SNP 0024.scaffold00093 432895 1 G C - Both SNP 0024.scaffold00093 433239 2 AG TT scaffold1479 Both SNP 0024.scaffold00093 433687 1 G A scaffold1479 Both SNP 0024.scaffold00093 433782 1 A G scaffold1479 Both INDEL 0024.scaffold00093 433802 1 . A scaffold1479 Both SNP 0024.scaffold00093 433881 1 T C scaffold1479 Both SNP 0024.scaffold00093 433893 1 T C scaffold1479 Both SNP 0024.scaffold00093 433945 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 434066 2 CG GT scaffold1479 Both SNP 0024.scaffold00093 434194 1 A T scaffold1479 Both SNP 0024.scaffold00093 434202 1 T C scaffold1479 Both SNP 0024.scaffold00093 434224 1 A C scaffold1479 Both SNP 0024.scaffold00093 434289 1 C G scaffold1479 Both SNP 0024.scaffold00093 434301 1 G A scaffold1479 Both SNP 0024.scaffold00093 434317 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 434344 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 434366 1 C T scaffold1479 ScafM INDEL 0024.scaffold00093 434384 1 . G scaffold1479 ScafM INDEL 0024.scaffold00093 434385 1 . G scaffold1479 ScafM SNP 0024.scaffold00093 434397 1 A G scaffold1479 Both SNP 0024.scaffold00093 434449 1 C T scaffold1479 Both SNP 0024.scaffold00093 434521 1 C T scaffold1479 ReadM SNP 0024.scaffold00093 434933 1 C G - Both SNP 0024.scaffold00093 434976 1 C A scaffold1479 Both SNP 0024.scaffold00093 435039 1 T G scaffold1479 Both SNP 0024.scaffold00093 435213 1 G C scaffold1479 Both SNP 0024.scaffold00093 435260 1 A G scaffold1479 Both SNP 0024.scaffold00093 435272 1 C T scaffold1479 Both SNP 0024.scaffold00093 435320 1 G T scaffold1479 Both INDEL 0024.scaffold00093 435359 1 A . scaffold1479 Both SNP 0024.scaffold00093 435486 1 T A scaffold1479 ScafM SNP 0024.scaffold00093 435639 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 435680 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 435690 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 435740 1 G A scaffold1479 ReadM SNP 0024.scaffold00093 435905 1 A G - ReadM SNP 0024.scaffold00093 435919 1 T A - ReadM SNP 0024.scaffold00093 435947 1 C T - ReadM SNP 0024.scaffold00093 435971 1 G C - ReadM SNP 0024.scaffold00093 436015 1 G C - ReadM INDEL 0024.scaffold00093 436062 1 . A - ReadM SNP 0024.scaffold00093 436140 1 G T - Both SNP 0024.scaffold00093 436219 1 C T scaffold1479 Both SNP 0024.scaffold00093 436280 1 C A scaffold1479 Both SNP 0024.scaffold00093 436323 1 G T scaffold1479 Both SNP 0024.scaffold00093 436417 1 C T scaffold1479 ReadM SNP 0024.scaffold00093 436614 1 C T - ReadM SNP 0024.scaffold00093 436623 1 A G - ReadM SNP 0024.scaffold00093 436645 1 G C - ReadM INDEL 0024.scaffold00093 436748 1 A . - ReadM SNP 0024.scaffold00093 436758 1 T A - ReadM SNP 0024.scaffold00093 436881 1 A T - ReadM SNP 0024.scaffold00093 436893 1 G A - ReadM SNP 0024.scaffold00093 436997 1 C G - ReadM SNP 0024.scaffold00093 437018 2 TT GC - ReadM SNP 0024.scaffold00093 437140 1 C A - Both SNP 0024.scaffold00093 437297 1 G T scaffold1479 ReadM SNP 0024.scaffold00093 437446 1 T G - ReadM SNP 0024.scaffold00093 437462 1 G T - ReadM SNP 0024.scaffold00093 437576 1 A T - ReadM SNP 0024.scaffold00093 437657 1 A T - Both INDEL 0024.scaffold00093 437700 2 TT .. scaffold1479 ScafM SNP 0024.scaffold00093 437725 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 437763 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 437766 1 A G scaffold1479 Both SNP 0024.scaffold00093 437782 1 C T scaffold1479 Both SNP 0024.scaffold00093 437805 1 G A scaffold1479 Both SNP 0024.scaffold00093 437823 1 C G scaffold1479 ReadM SNP 0024.scaffold00093 437909 1 A C - ReadM SNP 0024.scaffold00093 437964 1 A G - ReadM SNP 0024.scaffold00093 438061 1 G C - ReadM SNP 0024.scaffold00093 438064 1 C T - ReadM SNP 0024.scaffold00093 438073 1 T C - ReadM SNP 0024.scaffold00093 438169 1 T C - ReadM INDEL 0024.scaffold00093 438171 1 A . - ReadM SNP 0024.scaffold00093 438309 1 T A - ReadM SNP 0024.scaffold00093 438315 1 G A - ReadM SNP 0024.scaffold00093 438374 1 A G - ReadM SNP 0024.scaffold00093 438407 1 G A - ReadM INDEL 0024.scaffold00093 438542 1 A . - Both SNP 0024.scaffold00093 438629 1 T C scaffold1479 Both SNP 0024.scaffold00093 438696 1 G A scaffold1479 ReadM SNP 0024.scaffold00093 438768 1 A T - ReadM SNP 0024.scaffold00093 438778 1 G A - ReadM SNP 0024.scaffold00093 438954 1 T C - ReadM SNP 0024.scaffold00093 439013 1 G C - ReadM SNP 0024.scaffold00093 439033 1 G A - ReadM SNP 0024.scaffold00093 439084 1 T C - ReadM SNP 0024.scaffold00093 439150 1 G A - ReadM SNP 0024.scaffold00093 439181 1 C A - ReadM SNP 0024.scaffold00093 439190 1 T C - Both SNP 0024.scaffold00093 439231 1 A T scaffold1479 ScafM INDEL 0024.scaffold00093 439254 8 ........ TGGCAGGA scaffold1479 ScafM SNP 0024.scaffold00093 439690 1 A G scaffold1479 ScafM INDEL 0024.scaffold00093 439997 2 TT .. scaffold1479 ReadM SNP 0024.scaffold00093 440329 1 T C - ReadM SNP 0024.scaffold00093 440336 1 T C - ReadM SNP 0024.scaffold00093 440397 1 G A - ReadM SNP 0024.scaffold00093 440404 1 T C - ReadM SNP 0024.scaffold00093 440407 1 T C - ReadM SNP 0024.scaffold00093 440469 1 T C - ReadM SNP 0024.scaffold00093 440496 1 A T - ReadM SNP 0024.scaffold00093 440524 1 C T - Both INDEL 0024.scaffold00093 440736 2 AT .. scaffold1479 Both SNP 0024.scaffold00093 440810 1 C T scaffold1479 ScafM INDEL 0024.scaffold00093 440872 15 GAAATTCAAAGGAGT ............... scaffold1479 ScafM INDEL 0024.scaffold00093 440888 2 CG .. scaffold1479 ScafM INDEL 0024.scaffold00093 440947 1 G . scaffold1479 ScafM SNP 0024.scaffold00093 440950 2 AG GA scaffold1479 ReadM INDEL 0024.scaffold00093 440951 1 . A - Both SNP 0024.scaffold00093 441092 1 G T scaffold1479 Both SNP 0024.scaffold00093 441208 1 C T scaffold1479 Both SNP 0024.scaffold00093 441266 1 T A scaffold1479 Both INDEL 0024.scaffold00093 441533 1 . A scaffold1479 Both SNP 0024.scaffold00093 441574 1 A T scaffold1479 Both SNP 0024.scaffold00093 441729 1 T C scaffold1479 Both SNP 0024.scaffold00093 441744 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 441792 1 C A scaffold1479 ScafM INDEL 0024.scaffold00093 441797 1 G . scaffold1479 ScafM INDEL 0024.scaffold00093 441800 4 CCGA .... scaffold1479 ScafM INDEL 0024.scaffold00093 441805 2 CA .. scaffold1479 Both SNP 0024.scaffold00093 441938 1 G A scaffold1479 Both SNP 0024.scaffold00093 442019 1 G A scaffold1479 Both SNP 0024.scaffold00093 442232 1 A G scaffold1479 Both SNP 0024.scaffold00093 442307 1 T C scaffold1479 Both SNP 0024.scaffold00093 442396 1 A G scaffold1479 Both SNP 0024.scaffold00093 442433 1 C T scaffold1479 ScafM INDEL 0024.scaffold00093 442595 1 . G scaffold1479 ScafM SNP 0024.scaffold00093 442598 1 G A scaffold1479 ScafM INDEL 0024.scaffold00093 442609 9 TTAATATAA ......... scaffold1479 ScafM INDEL 0024.scaffold00093 442621 16 TTTCAAAAAATCATAT ................ scaffold1479 ScafM INDEL 0024.scaffold00093 442638 1 C . scaffold1479 ScafM SNP 0024.scaffold00093 442640 1 A G scaffold1479 ScafM INDEL 0024.scaffold00093 442642 1 G . scaffold1479 Both SNP 0024.scaffold00093 442652 1 G C scaffold1479 Both INDEL 0024.scaffold00093 442710 1 C . scaffold1479 Both SNP 0024.scaffold00093 442997 1 G A scaffold1479 Both SNP 0024.scaffold00093 442999 1 C A scaffold1479 Both SNP 0024.scaffold00093 443203 1 A T scaffold1479 Both SNP 0024.scaffold00093 443233 1 T C scaffold1479 ScafM INDEL 0024.scaffold00093 443294 1 . T scaffold1479 Both SNP 0024.scaffold00093 443496 1 A G scaffold1479 Both SNP 0024.scaffold00093 443596 1 A G scaffold1479 Both INDEL 0024.scaffold00093 443756 3 ... ACT scaffold1479 Both SNP 0024.scaffold00093 444064 1 T A scaffold1479 ScafM INDEL 0024.scaffold00093 444098 16 TGATTTTAGGAAAGGT ................ scaffold1479 Both INDEL 0024.scaffold00093 444158 1 . T scaffold1479 ReadM SNP 0024.scaffold00093 444274 1 A G - ReadM SNP 0024.scaffold00093 444354 1 T A - ReadM SNP 0024.scaffold00093 444360 1 G A - ReadM SNP 0024.scaffold00093 444366 1 T C - Both SNP 0024.scaffold00093 444478 1 A T scaffold1479 Both SNP 0024.scaffold00093 444483 1 G T scaffold1479 Both SNP 0024.scaffold00093 444492 1 A G scaffold1479 Both SNP 0024.scaffold00093 444554 1 A T scaffold1479 Both SNP 0024.scaffold00093 444765 1 T C scaffold1479 Both SNP 0024.scaffold00093 445280 1 G T scaffold1479 Both SNP 0024.scaffold00093 445340 1 A T scaffold1479 ScafM INDEL 0024.scaffold00093 445470 7 AATTTCA ....... scaffold1479 ScafM SNP 0024.scaffold00093 445552 2 TT AA scaffold1479 Both SNP 0024.scaffold00093 445574 1 A T scaffold1479 Both SNP 0024.scaffold00093 445576 1 C T scaffold1479 Both SNP 0024.scaffold00093 445716 1 A G scaffold1479 Both INDEL 0024.scaffold00093 446221 1 T . scaffold1479 Both INDEL 0024.scaffold00093 446392 1 T . scaffold1479 Both SNP 0024.scaffold00093 446408 1 A T scaffold1479 ReadM SNP 0024.scaffold00093 446569 1 T C - ReadM SNP 0024.scaffold00093 446588 1 G A - ReadM SNP 0024.scaffold00093 446631 1 A T - ReadM SNP 0024.scaffold00093 446784 1 T C - ReadM SNP 0024.scaffold00093 446826 1 A G - ReadM SNP 0024.scaffold00093 446907 1 A T - Both SNP 0024.scaffold00093 447083 1 G A scaffold1479 Both SNP 0024.scaffold00093 447121 1 C G scaffold1479 Both INDEL 0024.scaffold00093 447134 2 TG .. scaffold1479 Both SNP 0024.scaffold00093 447334 1 G C scaffold1479 Both SNP 0024.scaffold00093 447961 1 T C scaffold1479 Both SNP 0024.scaffold00093 448032 1 G T scaffold1479 Both SNP 0024.scaffold00093 448049 1 C T scaffold1479 Both SNP 0024.scaffold00093 448067 1 A T scaffold1479 Both SNP 0024.scaffold00093 448537 1 G T scaffold1479 Both SNP 0024.scaffold00093 448668 1 T C scaffold1479 ScafM INDEL 0024.scaffold00093 448976 3 ... TAT scaffold1479 ReadM SNP 0024.scaffold00093 449139 1 T G - Both INDEL 0024.scaffold00093 449412 1 . T scaffold1479 Both SNP 0024.scaffold00093 449467 1 C G scaffold1479 Both SNP 0024.scaffold00093 449585 1 T A scaffold1479 Both SNP 0024.scaffold00093 449664 1 T A scaffold1479 Both SNP 0024.scaffold00093 449694 1 A C scaffold1479 ScafM SNP 0024.scaffold00093 449897 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 449930 1 A T scaffold1479 ScafM SNP 0024.scaffold00093 450060 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 450063 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 450079 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 450236 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 450313 1 T C scaffold1479 ScafM INDEL 0024.scaffold00093 450382 1 . T scaffold1479 ScafM SNP 0024.scaffold00093 450751 1 T G scaffold1479 Both INDEL 0024.scaffold00093 451024 2 TG .. scaffold1479 Both SNP 0024.scaffold00093 451394 1 T C scaffold1479 Both SNP 0024.scaffold00093 451428 1 A T scaffold1479 Both SNP 0024.scaffold00093 451514 1 C T scaffold1479 Both SNP 0024.scaffold00093 451542 1 G A scaffold1479 Both SNP 0024.scaffold00093 451769 1 T C scaffold1479 Both SNP 0024.scaffold00093 451825 1 T A scaffold1479 Both INDEL 0024.scaffold00093 451883 1 . C scaffold1479 Both SNP 0024.scaffold00093 452080 1 C T scaffold1479 Both SNP 0024.scaffold00093 452097 1 C T scaffold1479 Both SNP 0024.scaffold00093 452101 1 T A scaffold1479 Both SNP 0024.scaffold00093 453153 1 G T scaffold1479 Both SNP 0024.scaffold00093 453183 1 C T scaffold1479 Both SNP 0024.scaffold00093 453615 1 T A scaffold1479 Both SNP 0024.scaffold00093 453761 1 T G scaffold1479 Both SNP 0024.scaffold00093 454087 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 454204 1 T C scaffold1479 Both SNP 0024.scaffold00093 454378 1 C G scaffold1479 ScafM SNP 0024.scaffold00093 454481 1 C G scaffold1479 ScafM INDEL 0024.scaffold00093 454562 1 T . scaffold1479 ScafM SNP 0024.scaffold00093 454593 1 A G scaffold1479 ScafM SNP 0024.scaffold00093 454716 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 454718 1 T C scaffold1479 Both SNP 0024.scaffold00093 454812 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 454939 1 G T scaffold1479 Both SNP 0024.scaffold00093 455190 1 C T scaffold1479 ReadM SNP 0024.scaffold00093 455348 1 C T - ReadM SNP 0024.scaffold00093 455436 1 T C - ReadM SNP 0024.scaffold00093 455463 1 T G - ReadM INDEL 0024.scaffold00093 455563 1 A . - ReadM SNP 0024.scaffold00093 455580 1 G T - Both SNP 0024.scaffold00093 455744 1 A T scaffold1479 Both SNP 0024.scaffold00093 455800 1 C T scaffold1479 ScafM SNP 0024.scaffold00093 455806 1 T C scaffold1479 ScafM INDEL 0024.scaffold00093 455813 1 . T scaffold1479 Both SNP 0024.scaffold00093 455834 1 C A scaffold1479 ScafM SNP 0024.scaffold00093 456298 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 456337 1 A T scaffold1479 ScafM SNP 0024.scaffold00093 456414 1 T G scaffold1479 ScafM SNP 0024.scaffold00093 456435 1 G T scaffold1479 ScafM SNP 0024.scaffold00093 456637 1 T C scaffold1393 ScafM INDEL 0024.scaffold00093 459952 2 TA .. scaffold44144 ScafM SNP 0024.scaffold00093 460032 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460251 1 C G scaffold44144 ScafM SNP 0024.scaffold00093 460337 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460381 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460508 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460548 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460558 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 460610 1 C T scaffold44144 ScafM SNP 0024.scaffold00093 460706 1 T G scaffold44144 ScafM SNP 0024.scaffold00093 460727 1 C A scaffold44144 ScafM SNP 0024.scaffold00093 460791 1 T A scaffold44144 ScafM SNP 0024.scaffold00093 460842 1 C A scaffold44144 ScafM SNP 0024.scaffold00093 460987 1 T A scaffold44144 ScafM SNP 0024.scaffold00093 461062 1 G A scaffold44144 ScafM SNP 0024.scaffold00093 461069 1 A G scaffold44144 ScafM SNP 0024.scaffold00093 461155 1 C T scaffold44144 ReadM SNP 0024.scaffold00093 464282 1 G A - ReadM SNP 0024.scaffold00093 464317 1 G T - ReadM SNP 0024.scaffold00093 464364 1 T C - ReadM SNP 0024.scaffold00093 464411 1 A C - ReadM SNP 0024.scaffold00093 464531 1 A C - ReadM SNP 0024.scaffold00093 464620 1 G C - Both SNP 0024.scaffold00093 464768 1 A G scaffold1479 Both SNP 0024.scaffold00093 464787 1 C T scaffold1479 ReadM SNP 0024.scaffold00093 464844 1 C T - Both INDEL 0024.scaffold00093 464968 1 . A scaffold1479 ScafM SNP 0024.scaffold00093 464994 1 G A scaffold1479 Both SNP 0024.scaffold00093 465031 1 C T scaffold1479 Both SNP 0024.scaffold00093 465060 1 T A scaffold1479 Both SNP 0024.scaffold00093 465246 1 T C scaffold1479 Both SNP 0024.scaffold00093 465271 1 A G scaffold1479 Both INDEL 0024.scaffold00093 465301 1 . T scaffold1479 ReadM INDEL 0024.scaffold00093 465472 1 G . - Both SNP 0024.scaffold00093 465614 1 A C scaffold1479 ReadM SNP 0024.scaffold00093 465648 1 G A - ReadM SNP 0024.scaffold00093 465662 1 C T - ReadM SNP 0024.scaffold00093 465725 1 T C - ReadM INDEL 0024.scaffold00093 465745 1 A . - ReadM INDEL 0024.scaffold00093 465792 1 C . - ReadM SNP 0024.scaffold00093 465953 1 A G - ReadM SNP 0024.scaffold00093 465982 1 T C - ReadM SNP 0024.scaffold00093 466028 1 G T - ReadM SNP 0024.scaffold00093 466098 1 T C - Both SNP 0024.scaffold00093 466147 1 T C scaffold1479 Both SNP 0024.scaffold00093 466200 1 A G scaffold1479 Both SNP 0024.scaffold00093 466206 1 T G scaffold1479 Both SNP 0024.scaffold00093 466285 1 A G scaffold1479 ReadM INDEL 0024.scaffold00093 466309 1 A . - ReadM SNP 0024.scaffold00093 466384 1 G A - ReadM SNP 0024.scaffold00093 466387 1 G T - ReadM SNP 0024.scaffold00093 466410 1 T C - ScafM SNP 0024.scaffold00093 466684 1 G A scaffold1479 ScafM SNP 0024.scaffold00093 466700 1 C A scaffold1479 ScafM INDEL 0024.scaffold00093 466729 3 GCT ... scaffold1479 ScafM INDEL 0024.scaffold00093 466741 2 AT .. scaffold1479 ScafM SNP 0024.scaffold00093 466754 1 T C scaffold1479 ScafM SNP 0024.scaffold00093 466797 1 T C scaffold1479 ReadM SNP 0024.scaffold00093 467463 1 C G - ReadM SNP 0024.scaffold00093 467706 1 A C - ReadM SNP 0024.scaffold00093 467775 1 T C - ReadM SNP 0024.scaffold00093 467789 1 A C - ReadM SNP 0024.scaffold00093 467821 1 G A - ReadM SNP 0024.scaffold00093 467834 1 G A - ReadM SNP 0024.scaffold00093 467896 1 A G - ReadM SNP 0024.scaffold00093 468035 1 A C - ScafM INDEL 0024.scaffold00093 468079 1 G . scaffold1479 ScafM INDEL 0024.scaffold00093 468133 12 ............ TTGCCCATTCAT scaffold1479 ScafM INDEL 0024.scaffold00093 468135 5 ..... GTGCC scaffold1479 ScafM INDEL 0024.scaffold00093 468136 1 . G scaffold1479 ScafM INDEL 0024.scaffold00093 468137 2 .. GT scaffold1479 ScafM SNP 0024.scaffold00093 468143 1 C A scaffold1479 ScafM SNP 0024.scaffold00093 468145 1 A G scaffold1479 ReadM SNP 0024.scaffold00093 468183 1 G A - ReadM SNP 0024.scaffold00093 468199 1 T G - ReadM SNP 0024.scaffold00093 468213 1 A G - ReadM SNP 0024.scaffold00093 468520 1 A T - ReadM SNP 0024.scaffold00093 468535 1 A G - ReadM SNP 0024.scaffold00093 468627 1 C G - ReadM SNP 0024.scaffold00093 468678 1 T C - ReadM SNP 0024.scaffold00093 468709 1 A C - ReadM SNP 0024.scaffold00093 468884 1 C T - ReadM SNP 0024.scaffold00093 469009 1 T A - ReadM INDEL 0024.scaffold00093 469013 1 . A - ReadM SNP 0024.scaffold00093 469075 1 A C - ReadM SNP 0024.scaffold00093 469113 1 G T - ReadM SNP 0024.scaffold00093 470512 1 C T - ReadM SNP 0024.scaffold00093 470578 1 T C - ReadM SNP 0024.scaffold00093 471045 1 C T - ReadM SNP 0024.scaffold00093 471063 1 T A - ReadM SNP 0024.scaffold00093 472227 1 C T - ReadM SNP 0024.scaffold00093 472253 1 T C - ReadM SNP 0024.scaffold00093 472298 1 G A - ReadM SNP 0024.scaffold00093 473276 1 A G - ReadM SNP 0024.scaffold00093 473292 1 A G - ReadM SNP 0024.scaffold00093 473350 1 C G - ReadM SNP 0024.scaffold00093 473383 1 A G - ReadM SNP 0024.scaffold00093 473399 1 C G - ReadM SNP 0024.scaffold00093 473469 1 G A - ReadM SNP 0024.scaffold00093 473534 1 A C - ReadM SNP 0024.scaffold00093 473757 1 A C - ReadM SNP 0024.scaffold00093 473761 1 C A - ReadM SNP 0024.scaffold00093 474015 1 T C - ReadM SNP 0024.scaffold00093 474053 1 T C - ReadM SNP 0024.scaffold00093 474063 1 T G - ReadM SNP 0024.scaffold00093 474207 1 A T - ReadM SNP 0024.scaffold00093 474422 1 T C - ReadM SNP 0024.scaffold00093 474465 1 T G - ReadM SNP 0024.scaffold00093 485600 1 C T - ReadM SNP 0024.scaffold00093 485806 1 G C - ReadM SNP 0024.scaffold00093 485837 1 G A - ReadM SNP 0024.scaffold00093 485872 1 T A - ReadM SNP 0024.scaffold00093 485886 1 A C - ReadM SNP 0024.scaffold00093 485936 1 C T - ReadM SNP 0024.scaffold00093 485997 1 T C - ReadM SNP 0024.scaffold00093 486113 1 T C - ReadM SNP 0024.scaffold00093 486157 1 A G - ReadM SNP 0024.scaffold00093 486160 1 C T - ReadM SNP 0024.scaffold00093 487429 1 A C - ReadM SNP 0024.scaffold00093 487433 1 A T - ReadM SNP 0024.scaffold00093 487519 1 A C - ReadM SNP 0024.scaffold00093 487611 1 G C - ReadM SNP 0024.scaffold00093 487714 1 C G - ScafM SNP 0024.scaffold00093 493822 1 C T scaffold42084 ScafM SNP 0024.scaffold00093 493842 1 C A scaffold42084 ScafM SNP 0024.scaffold00093 496207 1 C A scaffold5443 ScafM SNP 0024.scaffold00093 496544 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 496572 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 496631 1 C A scaffold22884 ScafM SNP 0024.scaffold00093 496648 1 G C scaffold22884 ScafM SNP 0024.scaffold00093 496658 1 G A scaffold22884 ScafM INDEL 0024.scaffold00093 496691 1 . T scaffold22884 ScafM SNP 0024.scaffold00093 496693 1 A C scaffold22884 ScafM INDEL 0024.scaffold00093 496746 1 T . scaffold22884 ScafM SNP 0024.scaffold00093 496779 1 G T scaffold22884 ScafM SNP 0024.scaffold00093 496797 1 C A scaffold22884 ScafM SNP 0024.scaffold00093 496956 1 T G scaffold22884 ScafM SNP 0024.scaffold00093 496987 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 497030 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 497034 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 497054 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 497065 1 T G scaffold22884 ScafM SNP 0024.scaffold00093 497086 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 497116 1 G T scaffold22884 ScafM SNP 0024.scaffold00093 497126 1 T C scaffold22884 ScafM INDEL 0024.scaffold00093 497130 1 A . scaffold22884 ScafM INDEL 0024.scaffold00093 497145 2 .A GC scaffold22884 ScafM SNP 0024.scaffold00093 497152 1 G T scaffold22884 ScafM SNP 0024.scaffold00093 497155 1 G C scaffold22884 ScafM SNP 0024.scaffold00093 497161 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 497193 2 CA TT scaffold22884 ScafM SNP 0024.scaffold00093 497202 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 497211 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 497228 1 A C scaffold22884 ScafM SNP 0024.scaffold00093 497236 2 GC CT scaffold22884 ScafM SNP 0024.scaffold00093 497257 1 G C scaffold22884 ScafM SNP 0024.scaffold00093 497295 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 497321 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 497344 1 T G scaffold22884 Both SNP 0024.scaffold00093 497425 1 C T scaffold22884 Both SNP 0024.scaffold00093 497435 1 C G scaffold22884 Both SNP 0024.scaffold00093 497490 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 497532 1 A C scaffold22884 ScafM SNP 0024.scaffold00093 497534 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 497538 1 T G scaffold22884 ScafM SNP 0024.scaffold00093 497566 1 A T scaffold22884 ScafM INDEL 0024.scaffold00093 497572 1 T . scaffold22884 ScafM SNP 0024.scaffold00093 497587 1 G A scaffold22884 ScafM INDEL 0024.scaffold00093 497593 1 T . scaffold22884 ScafM INDEL 0024.scaffold00093 497645 1 T . scaffold22884 ScafM INDEL 0024.scaffold00093 497722 1 . T scaffold22884 ScafM SNP 0024.scaffold00093 497725 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 497738 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 497756 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 497797 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 497873 1 G A scaffold22884 ScafM INDEL 0024.scaffold00093 497934 1 . T scaffold22884 ScafM INDEL 0024.scaffold00093 497950 4 .... AAAA scaffold22884 ScafM SNP 0024.scaffold00093 497973 2 CG TC scaffold22884 Both SNP 0024.scaffold00093 498003 1 T C scaffold22884 Both SNP 0024.scaffold00093 498017 1 C T scaffold22884 Both SNP 0024.scaffold00093 498198 1 G A scaffold22884 Both SNP 0024.scaffold00093 498245 1 T C scaffold22884 Both SNP 0024.scaffold00093 498273 1 T G scaffold22884 Both SNP 0024.scaffold00093 498304 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 498410 1 A C scaffold22884 ScafM INDEL 0024.scaffold00093 498422 2 AA .. scaffold22884 ScafM SNP 0024.scaffold00093 498428 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 498444 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 498478 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 498526 1 C T scaffold22884 Both SNP 0024.scaffold00093 498548 1 G C scaffold22884 ScafM SNP 0024.scaffold00093 498602 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 498613 2 AA GG scaffold22884 ScafM SNP 0024.scaffold00093 498618 1 G T scaffold22884 Both SNP 0024.scaffold00093 498680 1 G T scaffold22884 Both SNP 0024.scaffold00093 498759 1 C A scaffold22884 ScafM SNP 0024.scaffold00093 498801 1 G A scaffold22884 ScafM INDEL 0024.scaffold00093 498813 7 AAGTAGT ....... scaffold22884 ScafM SNP 0024.scaffold00093 498866 1 C T scaffold22884 Both SNP 0024.scaffold00093 498903 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 499248 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 499251 1 G T scaffold22884 ScafM SNP 0024.scaffold00093 499256 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 499332 1 T C scaffold22884 Both SNP 0024.scaffold00093 499381 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 499479 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 499529 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 499534 1 A C scaffold22884 ScafM SNP 0024.scaffold00093 499706 2 TT CC scaffold22884 ScafM SNP 0024.scaffold00093 499753 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 499775 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 499806 1 T C scaffold22884 Both SNP 0024.scaffold00093 499859 1 T C scaffold22884 Both SNP 0024.scaffold00093 499868 1 C T scaffold22884 Both SNP 0024.scaffold00093 499936 1 T G scaffold22884 Both SNP 0024.scaffold00093 499975 1 G A scaffold22884 Both SNP 0024.scaffold00093 500041 1 C T scaffold22884 Both SNP 0024.scaffold00093 500088 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 500126 2 AT TC scaffold22884 Both SNP 0024.scaffold00093 500209 1 A G scaffold22884 ScafM INDEL 0024.scaffold00093 500218 1 . G scaffold22884 ScafM SNP 0024.scaffold00093 500226 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 500231 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 500281 1 G C scaffold22884 ScafM INDEL 0024.scaffold00093 500421 1 A . scaffold22884 ScafM SNP 0024.scaffold00093 500460 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 500474 1 A C scaffold22884 ScafM SNP 0024.scaffold00093 500479 1 T C scaffold22884 ScafM INDEL 0024.scaffold00093 500488 1 . G scaffold22884 ScafM INDEL 0024.scaffold00093 500605 1 G . scaffold22884 ScafM SNP 0024.scaffold00093 500622 1 T G scaffold22884 ScafM SNP 0024.scaffold00093 500659 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 500684 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 500698 1 G A scaffold22884 ScafM INDEL 0024.scaffold00093 500711 3 ..A GTC scaffold22884 ScafM SNP 0024.scaffold00093 500738 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 500747 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 500765 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 500768 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 500785 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 500809 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 500864 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 500867 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 500871 1 A T scaffold22884 ScafM SNP 0024.scaffold00093 500912 2 GA AT scaffold22884 ScafM SNP 0024.scaffold00093 500944 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 501002 1 A G scaffold22884 ScafM INDEL 0024.scaffold00093 501025 2 .. AT scaffold22884 ScafM SNP 0024.scaffold00093 501031 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 501039 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 501065 2 AG TT scaffold22884 ScafM SNP 0024.scaffold00093 501077 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 501092 1 T C scaffold22884 ScafM INDEL 0024.scaffold00093 501151 1 T . scaffold22884 ScafM INDEL 0024.scaffold00093 501205 1 . C scaffold22884 ScafM INDEL 0024.scaffold00093 501230 1 T . scaffold22884 Both SNP 0024.scaffold00093 501286 1 A G scaffold22884 Both INDEL 0024.scaffold00093 501318 2 .. GA scaffold22884 ScafM SNP 0024.scaffold00093 501364 1 T C scaffold22884 ScafM INDEL 0024.scaffold00093 501367 1 . C scaffold22884 ScafM SNP 0024.scaffold00093 501398 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 501414 1 C A scaffold22884 ScafM SNP 0024.scaffold00093 501450 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 501454 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 501458 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 501484 1 A C scaffold22884 ScafM SNP 0024.scaffold00093 501493 1 G A scaffold22884 ScafM SNP 0024.scaffold00093 501510 2 CA TC scaffold22884 ScafM INDEL 0024.scaffold00093 501513 1 G . scaffold22884 ScafM SNP 0024.scaffold00093 501557 1 G C scaffold22884 ScafM SNP 0024.scaffold00093 501591 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 501614 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 501624 1 G T scaffold22884 ScafM SNP 0024.scaffold00093 501631 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 501678 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 501717 1 C A scaffold22884 ScafM SNP 0024.scaffold00093 501749 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 501772 1 C T scaffold22884 ScafM SNP 0024.scaffold00093 501829 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 501882 1 T C scaffold22884 ScafM SNP 0024.scaffold00093 501947 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 502061 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 502097 1 T A scaffold22884 ScafM SNP 0024.scaffold00093 502124 1 A G scaffold22884 ScafM SNP 0024.scaffold00093 502213 1 T C scaffold22884 ReadM SNP 0024.scaffold00093 502803 1 G A - ReadM SNP 0024.scaffold00093 502903 1 C T - ReadM SNP 0024.scaffold00093 502932 1 A G - ScafM SNP 0024.scaffold00093 522666 1 A G scaffold3976 ScafM SNP 0024.scaffold00093 522858 1 C T scaffold3976 ScafM SNP 0024.scaffold00093 522907 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 522915 1 C T scaffold3976 ScafM SNP 0024.scaffold00093 522951 1 C G scaffold3976 ScafM SNP 0024.scaffold00093 523051 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 523053 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 523107 1 A C scaffold3976 ScafM SNP 0024.scaffold00093 523115 2 AA CG scaffold3976 ScafM SNP 0024.scaffold00093 523129 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 523164 1 A G scaffold3976 ScafM SNP 0024.scaffold00093 523226 1 A G scaffold3976 ReadM INDEL 0024.scaffold00093 523281 1 . T - ScafM INDEL 0024.scaffold00093 523281 2 .A TT scaffold3976 Both SNP 0024.scaffold00093 523320 1 T G scaffold3976 Both SNP 0024.scaffold00093 523370 1 C A scaffold3976 Both SNP 0024.scaffold00093 523421 1 A T scaffold3976 Both SNP 0024.scaffold00093 523479 1 G A scaffold3976 ScafM INDEL 0024.scaffold00093 523486 14 ATTGAAGCAAAAAC .............. scaffold3976 ScafM SNP 0024.scaffold00093 523552 1 C A scaffold3976 ScafM SNP 0024.scaffold00093 523650 1 A C scaffold3976 ScafM SNP 0024.scaffold00093 523652 1 A G scaffold3976 ScafM SNP 0024.scaffold00093 523664 1 G T scaffold3976 ScafM SNP 0024.scaffold00093 523730 1 C A scaffold3976 ScafM INDEL 0024.scaffold00093 523759 1 A . scaffold3976 ScafM SNP 0024.scaffold00093 523773 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 523872 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 523879 1 T C scaffold3976 ScafM INDEL 0024.scaffold00093 523950 1 . T scaffold3976 ScafM SNP 0024.scaffold00093 524026 1 C G scaffold3976 ScafM SNP 0024.scaffold00093 524038 1 A G scaffold3976 ScafM INDEL 0024.scaffold00093 525742 8 ........ ATCGTGTC scaffold3976 ScafM SNP 0024.scaffold00093 526375 1 C T scaffold447 ScafM SNP 0024.scaffold00093 526379 2 TC CT scaffold447 ScafM SNP 0024.scaffold00093 526422 1 A G scaffold447 ScafM SNP 0024.scaffold00093 526426 1 T C scaffold447 ScafM SNP 0024.scaffold00093 526434 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526443 1 C T scaffold447 ScafM INDEL 0024.scaffold00093 526444 4 .... TTTG scaffold447 ScafM SNP 0024.scaffold00093 526460 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526485 1 A C scaffold447 ScafM SNP 0024.scaffold00093 526488 1 A C scaffold447 ScafM SNP 0024.scaffold00093 526501 1 C T scaffold447 ScafM SNP 0024.scaffold00093 526510 1 T C scaffold447 ScafM SNP 0024.scaffold00093 526524 2 GT AG scaffold447 ScafM SNP 0024.scaffold00093 526532 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526547 1 T A scaffold447 ScafM INDEL 0024.scaffold00093 526553 4 CATG .... scaffold447 ScafM INDEL 0024.scaffold00093 526581 1 T . scaffold447 ScafM SNP 0024.scaffold00093 526602 1 T A scaffold447 ScafM SNP 0024.scaffold00093 526608 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526636 1 C T scaffold447 ScafM SNP 0024.scaffold00093 526662 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526674 1 T G scaffold447 ScafM SNP 0024.scaffold00093 526695 1 T C scaffold447 ScafM SNP 0024.scaffold00093 526698 1 C A scaffold447 ScafM INDEL 0024.scaffold00093 526705 6 ...... CTCTTT scaffold447 ScafM SNP 0024.scaffold00093 526708 1 G T scaffold447 ScafM SNP 0024.scaffold00093 526733 1 G C scaffold447 ScafM SNP 0024.scaffold00093 526752 1 C A scaffold447 ScafM SNP 0024.scaffold00093 526755 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526775 2 AG GA scaffold447 ScafM SNP 0024.scaffold00093 526787 1 A G scaffold447 ScafM INDEL 0024.scaffold00093 526805 2 AT .. scaffold447 ScafM SNP 0024.scaffold00093 526811 1 T A scaffold447 ScafM SNP 0024.scaffold00093 526826 1 T C scaffold447 ScafM INDEL 0024.scaffold00093 526834 1 . A scaffold447 ScafM INDEL 0024.scaffold00093 526870 3 ... TCT scaffold447 ScafM SNP 0024.scaffold00093 526872 1 A T scaffold447 ScafM SNP 0024.scaffold00093 526874 2 GG TT scaffold447 ScafM SNP 0024.scaffold00093 526887 1 C T scaffold447 ScafM SNP 0024.scaffold00093 526933 1 G A scaffold447 ScafM SNP 0024.scaffold00093 526935 1 A G scaffold447 ScafM SNP 0024.scaffold00093 526957 1 G A scaffold447 ScafM SNP 0024.scaffold00093 541884 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 541888 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 541890 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 541910 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 541912 1 G C scaffold52538 ScafM SNP 0024.scaffold00093 541926 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 541937 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 541969 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 541971 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 541985 1 G T scaffold52538 ScafM SNP 0024.scaffold00093 541989 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542010 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542016 2 CA TG scaffold52538 ScafM SNP 0024.scaffold00093 542023 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542028 1 C G scaffold52538 ScafM SNP 0024.scaffold00093 542031 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542043 1 G C scaffold52538 ScafM SNP 0024.scaffold00093 542053 1 C G scaffold52538 ScafM SNP 0024.scaffold00093 542066 3 TCA ATG scaffold52538 ScafM SNP 0024.scaffold00093 542073 1 A T scaffold52538 ScafM SNP 0024.scaffold00093 542077 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 542081 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542104 1 T A scaffold52538 ScafM SNP 0024.scaffold00093 542106 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542124 1 C G scaffold52538 ScafM SNP 0024.scaffold00093 542137 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542139 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542144 1 G T scaffold52538 ScafM SNP 0024.scaffold00093 542147 1 A C scaffold52538 ScafM SNP 0024.scaffold00093 542155 1 C G scaffold52538 ScafM SNP 0024.scaffold00093 542163 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542192 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 542200 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542216 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542220 3 CGC TAT scaffold52538 ScafM SNP 0024.scaffold00093 542280 2 TG GT scaffold52538 ScafM SNP 0024.scaffold00093 542292 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542305 1 T G scaffold52538 ScafM SNP 0024.scaffold00093 542320 2 TG CA scaffold52538 ScafM SNP 0024.scaffold00093 542330 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542340 2 GG AT scaffold52538 ScafM SNP 0024.scaffold00093 542347 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542352 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542372 1 T A scaffold52538 ScafM SNP 0024.scaffold00093 542435 1 T G scaffold52538 ScafM SNP 0024.scaffold00093 542440 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542447 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542449 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542462 2 GT AC scaffold52538 ScafM SNP 0024.scaffold00093 542474 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 542502 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542505 2 GA TG scaffold52538 ScafM SNP 0024.scaffold00093 542518 2 GG AC scaffold52538 ScafM SNP 0024.scaffold00093 542523 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542528 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542535 2 CC TA scaffold52538 ScafM SNP 0024.scaffold00093 542550 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 542563 1 C A scaffold52538 ScafM INDEL 0024.scaffold00093 542577 1 T . scaffold52538 ScafM SNP 0024.scaffold00093 542598 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 542634 1 G T scaffold52538 ScafM SNP 0024.scaffold00093 542649 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542886 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 542920 1 T G scaffold52538 ScafM SNP 0024.scaffold00093 542923 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542929 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 542963 1 G T scaffold52538 ScafM SNP 0024.scaffold00093 542965 1 A C scaffold52538 ScafM SNP 0024.scaffold00093 542980 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 542989 1 G T scaffold52538 ScafM SNP 0024.scaffold00093 542992 1 C T scaffold52538 ScafM SNP 0024.scaffold00093 543043 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 543108 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 543110 1 G A scaffold52538 ScafM SNP 0024.scaffold00093 543127 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 543131 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 543150 1 A G scaffold52538 ScafM SNP 0024.scaffold00093 543157 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 543171 1 T C scaffold52538 ScafM SNP 0024.scaffold00093 543176 1 G C scaffold52538 ScafM SNP 0024.scaffold00093 543334 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 543338 2 GA CG scaffold10724 ScafM SNP 0024.scaffold00093 543346 1 T A scaffold10724 ScafM SNP 0024.scaffold00093 543368 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543396 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 543398 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543407 2 AG GA scaffold10724 ScafM SNP 0024.scaffold00093 543410 1 A C scaffold10724 ScafM SNP 0024.scaffold00093 543422 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543425 2 CG TA scaffold10724 ScafM SNP 0024.scaffold00093 543439 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543461 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 543472 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543474 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543482 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543502 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543508 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 543519 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543536 1 G C scaffold10724 ScafM SNP 0024.scaffold00093 543570 3 ATA GGC scaffold10724 ScafM SNP 0024.scaffold00093 543581 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 543605 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543624 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 543631 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 543641 1 A T scaffold10724 ScafM SNP 0024.scaffold00093 543657 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 543664 1 G A scaffold10724 ScafM INDEL 0024.scaffold00093 543677 1 . T scaffold10724 ScafM SNP 0024.scaffold00093 543683 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 543687 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543689 1 T A scaffold10724 ScafM SNP 0024.scaffold00093 543693 2 GT CC scaffold10724 ScafM SNP 0024.scaffold00093 543698 2 TT GC scaffold10724 ScafM SNP 0024.scaffold00093 543701 2 GT AC scaffold10724 ScafM SNP 0024.scaffold00093 543715 1 A C scaffold10724 ScafM SNP 0024.scaffold00093 543758 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543770 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543782 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 543785 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 543799 1 T A scaffold10724 ScafM SNP 0024.scaffold00093 543811 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 543813 2 GG AT scaffold10724 ScafM SNP 0024.scaffold00093 543834 1 T A scaffold10724 ScafM SNP 0024.scaffold00093 543840 1 A T scaffold10724 ScafM INDEL 0024.scaffold00093 543862 5 TTAAT ..... scaffold10724 ScafM SNP 0024.scaffold00093 543888 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 543890 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543895 2 TA AC scaffold10724 ScafM SNP 0024.scaffold00093 543900 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 543909 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 543926 1 A C scaffold10724 ScafM SNP 0024.scaffold00093 543933 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 543965 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 543983 1 C A scaffold10724 ScafM SNP 0024.scaffold00093 544018 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 544034 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544047 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544071 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544074 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544076 2 TT GG scaffold10724 ScafM SNP 0024.scaffold00093 544079 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544093 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544131 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544133 1 G C scaffold10724 ScafM SNP 0024.scaffold00093 544169 2 GC AG scaffold10724 ScafM SNP 0024.scaffold00093 544203 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 544211 1 C T scaffold10724 ScafM INDEL 0024.scaffold00093 544233 1 . A scaffold10724 ScafM INDEL 0024.scaffold00093 544238 1 A . scaffold10724 ScafM SNP 0024.scaffold00093 544269 1 G C scaffold10724 ScafM SNP 0024.scaffold00093 544279 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 544292 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 544327 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544346 1 A C scaffold10724 ScafM SNP 0024.scaffold00093 544350 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544356 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 544364 1 T G scaffold10724 ScafM SNP 0024.scaffold00093 544371 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 544424 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544427 1 A G scaffold10724 ScafM SNP 0024.scaffold00093 544434 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544437 1 G A scaffold10724 ScafM SNP 0024.scaffold00093 544450 1 A G scaffold10724 ScafM INDEL 0024.scaffold00093 544463 4 .... CAGG scaffold10724 ScafM INDEL 0024.scaffold00093 544465 1 . G scaffold10724 ScafM INDEL 0024.scaffold00093 544466 1 . T scaffold10724 ScafM SNP 0024.scaffold00093 544482 2 GT AG scaffold10724 ScafM SNP 0024.scaffold00093 544489 2 CT AC scaffold10724 ScafM SNP 0024.scaffold00093 544493 1 T C scaffold10724 ScafM SNP 0024.scaffold00093 544505 1 C T scaffold10724 ScafM SNP 0024.scaffold00093 544507 1 A T scaffold10724 ScafM SNP 0024.scaffold00093 544512 1 G A scaffold10724 ScafM INDEL 0024.scaffold00093 544540 3 ... GTA scaffold10724 ScafM SNP 0024.scaffold00093 544547 1 G T scaffold10724 ScafM SNP 0024.scaffold00093 544556 1 A C scaffold10724 ScafM SNP 0024.scaffold00093 545451 1 T C scaffold22590 ScafM SNP 0024.scaffold00093 545453 1 A G scaffold22590 ScafM SNP 0024.scaffold00093 545476 1 G C scaffold22590 ScafM SNP 0024.scaffold00093 545492 1 A G scaffold22590 ScafM SNP 0024.scaffold00093 545496 1 T G scaffold22590 ScafM SNP 0024.scaffold00093 545510 1 G A scaffold22590 ScafM SNP 0024.scaffold00093 545540 1 T A scaffold22590 ScafM SNP 0024.scaffold00093 545542 1 G A scaffold22590 ScafM SNP 0024.scaffold00093 545578 1 G A scaffold22590 ScafM SNP 0024.scaffold00093 545650 1 T G scaffold22590 ScafM SNP 0024.scaffold00093 545664 1 A G scaffold22590 ScafM SNP 0024.scaffold00093 545726 1 A C scaffold22590 ScafM SNP 0024.scaffold00093 545733 1 T C scaffold22590 ScafM SNP 0024.scaffold00093 545757 1 G A scaffold22590 ScafM SNP 0024.scaffold00093 545779 1 A T scaffold22590 ScafM INDEL 0024.scaffold00093 545826 1 A . scaffold22590 ScafM SNP 0024.scaffold00093 561355 1 A G scaffold9367 ReadM SNP 0024.scaffold00093 580906 1 T A - ScafM SNP 0024.scaffold00093 582183 1 C T scaffold3976 Both SNP 0024.scaffold00093 582774 1 T C scaffold3976 Both SNP 0024.scaffold00093 582841 1 A G scaffold3976 ScafM SNP 0024.scaffold00093 583000 1 T G scaffold3976 ScafM SNP 0024.scaffold00093 583787 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 584177 1 A G scaffold3976 ReadM SNP 0024.scaffold00093 586482 1 G A - Both SNP 0024.scaffold00093 586645 1 T C scaffold3976 Both SNP 0024.scaffold00093 587080 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 588507 1 C T scaffold3976 ScafM INDEL 0024.scaffold00093 589093 28 ............................ ATTTATGAGGGGCAGTTTTTTTTATTTT scaffold3976 ReadM SNP 0024.scaffold00093 589184 1 A C - ReadM INDEL 0024.scaffold00093 589197 1 T . - ReadM SNP 0024.scaffold00093 589211 1 G C - ReadM SNP 0024.scaffold00093 589470 1 G A - ReadM SNP 0024.scaffold00093 589492 1 T G - ReadM SNP 0024.scaffold00093 589831 1 T C - ReadM SNP 0024.scaffold00093 589835 1 C A - ScafM INDEL 0024.scaffold00093 590050 1 . A scaffold30878 ScafM SNP 0024.scaffold00093 590078 1 A G scaffold30878 Both SNP 0024.scaffold00093 590091 1 C G scaffold30878 ScafM SNP 0024.scaffold00093 590097 1 C G scaffold30878 ScafM SNP 0024.scaffold00093 590153 1 G A scaffold30878 ScafM INDEL 0024.scaffold00093 590252 1 . T scaffold6196 ReadM SNP 0024.scaffold00093 590465 1 A G - ReadM SNP 0024.scaffold00093 590473 1 C T - Both SNP 0024.scaffold00093 591520 1 C A scaffold3976 ScafM SNP 0024.scaffold00093 591546 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 591561 1 A C scaffold3976 ScafM SNP 0024.scaffold00093 591758 1 C T scaffold3976 ScafM INDEL 0024.scaffold00093 591896 10 TAGACGAAGA .......... scaffold3976 Both SNP 0024.scaffold00093 591962 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 593271 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 593293 1 G A scaffold3976 ScafM SNP 0024.scaffold00093 593329 1 T C scaffold3976 Both SNP 0024.scaffold00093 593402 1 G A scaffold3976 Both SNP 0024.scaffold00093 593457 1 G C scaffold3976 ScafM SNP 0024.scaffold00093 593592 1 A C scaffold3976 ScafM SNP 0024.scaffold00093 593831 1 C T scaffold3976 Both SNP 0024.scaffold00093 594597 1 C T scaffold3976 Both SNP 0024.scaffold00093 594614 1 T C scaffold3976 ReadM SNP 0024.scaffold00093 595142 1 C T - Both SNP 0024.scaffold00093 595266 1 A T scaffold3976 Both SNP 0024.scaffold00093 595270 1 G A scaffold3976 ReadM SNP 0024.scaffold00093 595494 1 T A - Both SNP 0024.scaffold00093 595838 1 T C scaffold3976 Both INDEL 0024.scaffold00093 595942 2 TT .. scaffold3976 ScafM INDEL 0024.scaffold00093 595970 4 ATAT .... scaffold3976 Both SNP 0024.scaffold00093 596034 1 T C scaffold3976 ReadM INDEL 0024.scaffold00093 596050 1 . A - ScafM INDEL 0024.scaffold00093 596050 2 .C AT scaffold3976 Both SNP 0024.scaffold00093 596144 1 A G scaffold3976 Both SNP 0024.scaffold00093 596633 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 596793 1 G A scaffold3976 Both SNP 0024.scaffold00093 596886 1 T A scaffold3976 Both SNP 0024.scaffold00093 597111 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 597472 1 T A scaffold3976 ScafM INDEL 0024.scaffold00093 597576 1 C . scaffold3976 ScafM INDEL 0024.scaffold00093 597691 4 .... AATG scaffold3976 ScafM SNP 0024.scaffold00093 598622 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 598725 1 C T scaffold3976 ReadM SNP 0024.scaffold00093 599101 1 T G - Both SNP 0024.scaffold00093 599512 1 C T scaffold3976 Both SNP 0024.scaffold00093 599589 1 T C scaffold3976 ReadM INDEL 0024.scaffold00093 599704 1 T . - ReadM SNP 0024.scaffold00093 599729 1 T C - ReadM INDEL 0024.scaffold00093 599785 1 . A - Both SNP 0024.scaffold00093 600140 1 C T scaffold3976 Both SNP 0024.scaffold00093 600248 1 T C scaffold3976 Both INDEL 0024.scaffold00093 600334 1 T . scaffold3976 ScafM SNP 0024.scaffold00093 600397 1 A G scaffold3976 ScafM SNP 0024.scaffold00093 600436 1 G A scaffold3976 ScafM INDEL 0024.scaffold00093 600596 2 TT .. scaffold3976 ScafM SNP 0024.scaffold00093 601060 1 G T scaffold3976 ScafM SNP 0024.scaffold00093 601285 1 A G scaffold3976 Both SNP 0024.scaffold00093 601468 1 T A scaffold3976 ReadM SNP 0024.scaffold00093 601571 1 C T - ReadM SNP 0024.scaffold00093 601580 1 A G - ReadM SNP 0024.scaffold00093 601607 1 C G - ReadM SNP 0024.scaffold00093 602073 1 C T - ReadM SNP 0024.scaffold00093 602099 1 A G - ReadM SNP 0024.scaffold00093 602286 1 T G - ReadM SNP 0024.scaffold00093 602528 1 T C - ReadM SNP 0024.scaffold00093 602645 1 G A - ReadM SNP 0024.scaffold00093 602670 1 T G - ReadM SNP 0024.scaffold00093 602710 1 T A - ReadM SNP 0024.scaffold00093 602887 1 C T - Both SNP 0024.scaffold00093 604774 1 T C scaffold3976 Both SNP 0024.scaffold00093 604813 1 C G scaffold3976 ScafM INDEL 0024.scaffold00093 605208 28 TGGAATCTGCCATTGTTGATGTGAACTA ............................ scaffold3976 Both SNP 0024.scaffold00093 605473 1 C T scaffold3976 ReadM INDEL 0024.scaffold00093 605586 1 A . - Both SNP 0024.scaffold00093 605796 1 T C scaffold3976 Both SNP 0024.scaffold00093 605989 1 A G scaffold3976 Both SNP 0024.scaffold00093 606076 1 A G scaffold3976 ScafM INDEL 0024.scaffold00093 606449 4 .... AAAA scaffold3976 ReadM SNP 0024.scaffold00093 606654 1 C T - ReadM SNP 0024.scaffold00093 606667 1 G A - ReadM SNP 0024.scaffold00093 606733 1 A C - ReadM SNP 0024.scaffold00093 606764 1 A G - ScafM SNP 0024.scaffold00093 607305 1 A T scaffold3976 Both SNP 0024.scaffold00093 607982 1 G A scaffold3976 Both SNP 0024.scaffold00093 608071 1 T C scaffold3976 ReadM SNP 0024.scaffold00093 608233 1 T A - Both SNP 0024.scaffold00093 608511 1 T C scaffold3976 Both SNP 0024.scaffold00093 608684 1 T G scaffold3976 Both SNP 0024.scaffold00093 608687 1 T G scaffold3976 Both SNP 0024.scaffold00093 608709 1 G A scaffold3976 Both SNP 0024.scaffold00093 608762 1 T C scaffold3976 ScafM SNP 0024.scaffold00093 608774 1 T A scaffold3976 Both SNP 0024.scaffold00093 609059 1 C T scaffold3976 Both SNP 0024.scaffold00093 609344 1 G T scaffold3976 Both SNP 0024.scaffold00093 609554 1 C T scaffold3976 Both INDEL 0024.scaffold00093 609817 1 A . scaffold3976 Both SNP 0024.scaffold00093 610103 1 C G scaffold3976 Both INDEL 0024.scaffold00093 610636 1 . T scaffold3976 Both SNP 0024.scaffold00093 610847 1 G C scaffold3976 Both SNP 0024.scaffold00093 611090 1 C T scaffold3976 Both INDEL 0024.scaffold00093 611242 1 T . scaffold3976 ReadM SNP 0024.scaffold00093 611557 1 T A - ReadM SNP 0024.scaffold00093 611590 1 C A - ReadM SNP 0024.scaffold00093 611699 1 A G - ReadM SNP 0024.scaffold00093 611735 1 G A - Both SNP 0024.scaffold00093 611969 1 T C scaffold3976 ReadM SNP 0024.scaffold00093 612057 1 T G - ReadM SNP 0024.scaffold00093 612478 1 T C - ReadM SNP 0024.scaffold00093 612549 1 G T - ReadM SNP 0024.scaffold00093 615529 1 A T - ReadM SNP 0024.scaffold00093 615572 1 C T - ScafM SNP 0024.scaffold00093 638712 1 G A scaffold2732 ScafM SNP 0024.scaffold00093 638839 1 A T scaffold2732 ScafM SNP 0024.scaffold00093 638842 2 GT TA scaffold2732 ScafM INDEL 0024.scaffold00093 638881 2 TT .. scaffold2732 Both SNP 0024.scaffold00093 639015 1 A C scaffold2732 Both INDEL 0024.scaffold00093 639025 1 . T scaffold2732 Both SNP 0024.scaffold00093 639283 1 G T scaffold2732 ScafM SNP 0024.scaffold00093 640135 2 AT TG scaffold2732 ScafM INDEL 0024.scaffold00093 640208 12 GATGTTGGCTAT ............ scaffold2732 ScafM INDEL 0024.scaffold00093 640653 6 CACAAT ...... scaffold2732 Both SNP 0024.scaffold00093 640660 1 A G scaffold2732 ScafM SNP 0024.scaffold00093 640727 1 A C scaffold2732 Both SNP 0024.scaffold00093 641954 1 C T scaffold2732 ReadM SNP 0024.scaffold00093 642248 1 G T - ReadM SNP 0024.scaffold00093 642561 1 T A - Both SNP 0024.scaffold00093 643987 1 A G scaffold2732 ScafM SNP 0024.scaffold00093 644013 1 A C scaffold2732 ScafM INDEL 0024.scaffold00093 644492 2 .. TT scaffold2732 Both SNP 0024.scaffold00093 645202 1 A G scaffold2732 Both SNP 0024.scaffold00093 645355 1 A G scaffold2732 Both SNP 0024.scaffold00093 645512 1 T A scaffold2732 Both INDEL 0024.scaffold00093 645604 2 TA .. scaffold2732 ReadM SNP 0024.scaffold00093 645780 1 T C - ReadM SNP 0024.scaffold00093 646947 1 G A - Both SNP 0024.scaffold00093 648097 1 A C scaffold2732 Both SNP 0024.scaffold00093 649199 1 A G scaffold2732 Both SNP 0024.scaffold00093 649252 1 C T scaffold2732 ReadM SNP 0024.scaffold00093 649285 1 A G - ReadM SNP 0024.scaffold00093 649407 1 C A - ReadM SNP 0024.scaffold00093 649464 1 T C - Both INDEL 0024.scaffold00093 649585 1 T . scaffold2732 ReadM SNP 0024.scaffold00093 650076 1 A G - Both SNP 0024.scaffold00093 650560 1 T A scaffold2732 Both SNP 0024.scaffold00093 650808 1 G C scaffold2732 ScafM SNP 0024.scaffold00093 651054 2 TC CA scaffold2732 ReadM SNP 0024.scaffold00093 651141 1 A G - ReadM SNP 0024.scaffold00093 651199 1 C T - Both SNP 0024.scaffold00093 651854 1 A T scaffold2732 Both SNP 0024.scaffold00093 651856 1 C T scaffold2732 ReadM SNP 0024.scaffold00093 652234 1 C T - ReadM SNP 0024.scaffold00093 652268 1 G C - Both SNP 0024.scaffold00093 652458 1 C T scaffold2732 Both INDEL 0024.scaffold00093 652467 1 A . scaffold2732 Both SNP 0024.scaffold00093 652524 1 T C scaffold2732 Both SNP 0024.scaffold00093 652534 1 T A scaffold2732 ScafM INDEL 0024.scaffold00093 652564 1 . A scaffold2732 ReadM INDEL 0024.scaffold00093 652571 1 . C - ScafM INDEL 0024.scaffold00093 652760 3 ... AAA scaffold2732 Both SNP 0024.scaffold00093 652892 1 G A scaffold2732 ReadM SNP 0024.scaffold00093 653265 1 A G - ReadM SNP 0024.scaffold00093 653473 1 C T - ReadM SNP 0024.scaffold00093 653508 2 AC GG - ReadM SNP 0024.scaffold00093 654060 1 C A - ReadM INDEL 0024.scaffold00093 654231 3 CAC ... - ReadM SNP 0024.scaffold00093 654510 1 T C - ReadM SNP 0024.scaffold00093 654790 1 G T - ReadM SNP 0024.scaffold00093 655018 1 C A - ReadM SNP 0024.scaffold00093 655341 1 T C - Both SNP 0024.scaffold00093 655490 1 G C scaffold2732 Both SNP 0024.scaffold00093 655839 1 T G scaffold2732 Both SNP 0024.scaffold00093 655936 1 C T scaffold2732 Both SNP 0024.scaffold00093 658198 1 G A scaffold2732 Both SNP 0024.scaffold00093 658338 1 C G scaffold2732 Both SNP 0024.scaffold00093 658891 1 C T scaffold2732 Both SNP 0024.scaffold00093 660719 1 G A scaffold2732 ScafM INDEL 0024.scaffold00093 660788 3 CTC ... scaffold2732 ScafM SNP 0024.scaffold00093 660799 1 T C scaffold2732 Both SNP 0024.scaffold00093 660917 1 G A scaffold2732 Both SNP 0024.scaffold00093 661047 1 T C scaffold2732 Both SNP 0024.scaffold00093 661051 1 C A scaffold2732 ScafM INDEL 0024.scaffold00093 661228 7 GGTTGAA ....... scaffold2732 Both SNP 0024.scaffold00093 661523 1 G A scaffold2732 Both SNP 0024.scaffold00093 661848 1 A T scaffold2732 Both SNP 0024.scaffold00093 661981 1 G A scaffold2732 Both SNP 0024.scaffold00093 661998 1 G A scaffold2732 Both SNP 0024.scaffold00093 662258 1 G A scaffold2732 Both SNP 0024.scaffold00093 662311 1 A G scaffold2732 Both SNP 0024.scaffold00093 662345 1 G A scaffold2732 ScafM SNP 0024.scaffold00093 662582 1 A G scaffold2732 Both SNP 0024.scaffold00093 662641 1 A C scaffold2732 Both SNP 0024.scaffold00093 662776 1 T A scaffold2732 Both SNP 0024.scaffold00093 662790 1 C T scaffold2732 Both SNP 0024.scaffold00093 662930 1 G T scaffold2732 Both SNP 0024.scaffold00093 663076 1 T A scaffold2732 Both SNP 0024.scaffold00093 663423 1 A G scaffold2732 Both SNP 0024.scaffold00093 663606 1 C T scaffold2732 Both SNP 0024.scaffold00093 663666 1 A G scaffold2732 Both SNP 0024.scaffold00093 664035 1 G A scaffold2732 Both SNP 0024.scaffold00093 664538 1 G A scaffold2732 Both SNP 0024.scaffold00093 664978 1 T C scaffold2732 Both SNP 0024.scaffold00093 665027 1 G A scaffold2732 ReadM SNP 0024.scaffold00093 665198 1 T C - ScafM INDEL 0024.scaffold00093 665678 15 GGTCAAATAACTTTG ............... scaffold2732 ScafM SNP 0024.scaffold00093 665702 1 T C scaffold2732 ScafM SNP 0024.scaffold00093 667044 1 T C scaffold2732 Both SNP 0024.scaffold00093 667384 1 C T scaffold2732 Both SNP 0024.scaffold00093 667480 1 G A scaffold2732 Both INDEL 0024.scaffold00093 667682 1 . A scaffold2732 Both SNP 0024.scaffold00093 667733 1 T A scaffold2732 Both SNP 0024.scaffold00093 667903 1 A G scaffold2732 Both SNP 0024.scaffold00093 668041 1 A C scaffold2732 Both SNP 0024.scaffold00093 668173 1 A C scaffold2732 Both SNP 0024.scaffold00093 668215 1 A G scaffold2732 Both SNP 0024.scaffold00093 668339 1 G A scaffold2732 ScafM INDEL 0024.scaffold00093 668700 4 TATA .... scaffold2732 Both INDEL 0024.scaffold00093 668810 1 . C scaffold2732 Both SNP 0024.scaffold00093 668926 1 A C scaffold2732 Both SNP 0024.scaffold00093 668935 1 C T scaffold2732 Both SNP 0024.scaffold00093 669204 1 C T scaffold2732 ScafM SNP 0024.scaffold00093 669537 1 G A scaffold2732 ScafM SNP 0024.scaffold00093 669760 1 T C scaffold2732 ScafM SNP 0024.scaffold00093 669775 1 G C scaffold2732 ScafM SNP 0024.scaffold00093 669799 1 T C scaffold2732 ScafM SNP 0024.scaffold00093 670407 2 CC TA scaffold5759 ScafM SNP 0024.scaffold00093 670426 1 A C scaffold5759 ScafM SNP 0024.scaffold00093 670440 1 A C scaffold5759 ScafM SNP 0024.scaffold00093 670447 1 A G scaffold5759 ReadM SNP 0024.scaffold00093 671290 1 T A - ReadM INDEL 0024.scaffold00093 671344 2 TA .. - ReadM SNP 0024.scaffold00093 671567 1 A G - ReadM SNP 0024.scaffold00093 671603 1 A G - ReadM SNP 0024.scaffold00093 671623 1 A T - ReadM SNP 0024.scaffold00093 672177 1 G T - ScafM SNP 0024.scaffold00093 672586 1 T A scaffold2732 ScafM SNP 0024.scaffold00093 672588 1 G T scaffold2732 ReadM SNP 0024.scaffold00093 672880 1 T C - ReadM SNP 0024.scaffold00093 673642 1 G T - ReadM SNP 0024.scaffold00093 673825 1 G T - ReadM SNP 0024.scaffold00093 673900 1 C T - ReadM SNP 0024.scaffold00093 674055 1 A G - ReadM SNP 0024.scaffold00093 674119 1 C T - ReadM SNP 0024.scaffold00093 674290 1 T A - ReadM SNP 0024.scaffold00093 674353 1 G C - ReadM SNP 0024.scaffold00093 674371 1 A G - ReadM SNP 0024.scaffold00093 674458 1 C T - ScafM SNP 0024.scaffold00093 675656 1 A T scaffold12538 Both SNP 0024.scaffold00093 676257 1 G T scaffold12538 Both SNP 0024.scaffold00093 676459 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 676495 1 C G scaffold12538 ScafM INDEL 0024.scaffold00093 676750 2 .G TA scaffold12538 ScafM SNP 0024.scaffold00093 676753 2 TT AA scaffold12538 Both SNP 0024.scaffold00093 676790 1 C T scaffold12538 Both SNP 0024.scaffold00093 676824 1 A T scaffold12538 ReadM INDEL 0024.scaffold00093 677498 1 . C - Both INDEL 0024.scaffold00093 677503 1 . T scaffold12538 Both SNP 0024.scaffold00093 677566 1 C T scaffold12538 ReadM SNP 0024.scaffold00093 677683 1 C T - ReadM SNP 0024.scaffold00093 677700 1 C T - ReadM SNP 0024.scaffold00093 677739 1 T C - ReadM INDEL 0024.scaffold00093 677888 3 CCT ... - Both SNP 0024.scaffold00093 678707 1 C G scaffold12538 ScafM SNP 0024.scaffold00093 679050 1 T C scaffold12538 Both SNP 0024.scaffold00093 679208 1 C T scaffold12538 Both SNP 0024.scaffold00093 679344 1 T C scaffold12538 ScafM INDEL 0024.scaffold00093 679536 3 CTA ... scaffold12538 Both SNP 0024.scaffold00093 679562 1 T C scaffold12538 Both SNP 0024.scaffold00093 679873 1 T C scaffold12538 Both SNP 0024.scaffold00093 680182 1 A T scaffold12538 Both SNP 0024.scaffold00093 680443 1 C T scaffold12538 Both INDEL 0024.scaffold00093 680709 1 . T scaffold12538 Both SNP 0024.scaffold00093 680804 1 T G scaffold12538 Both SNP 0024.scaffold00093 682041 1 C A scaffold12538 Both SNP 0024.scaffold00093 682075 1 A C scaffold12538 Both SNP 0024.scaffold00093 682206 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 682208 1 A T scaffold12538 Both SNP 0024.scaffold00093 682234 1 T C scaffold12538 Both SNP 0024.scaffold00093 682431 1 T G scaffold12538 Both SNP 0024.scaffold00093 682501 1 C T scaffold12538 ReadM SNP 0024.scaffold00093 683119 1 T A - ReadM SNP 0024.scaffold00093 684056 1 A G - ReadM SNP 0024.scaffold00093 684190 1 A G - ReadM SNP 0024.scaffold00093 684386 1 G C - ReadM SNP 0024.scaffold00093 684840 1 G A - ReadM INDEL 0024.scaffold00093 685834 1 . T - ReadM SNP 0024.scaffold00093 685860 1 T C - ReadM SNP 0024.scaffold00093 685877 1 C A - Both INDEL 0024.scaffold00093 686435 1 . T scaffold12538 Both SNP 0024.scaffold00093 686684 1 T A scaffold12538 Both SNP 0024.scaffold00093 686982 1 C A scaffold12538 ReadM SNP 0024.scaffold00093 687110 1 C A - ReadM SNP 0024.scaffold00093 687402 1 T A - ReadM SNP 0024.scaffold00093 687526 1 G A - ReadM SNP 0024.scaffold00093 687629 1 T A - ReadM SNP 0024.scaffold00093 687919 1 C T - ReadM SNP 0024.scaffold00093 688047 1 C T - ReadM INDEL 0024.scaffold00093 688136 3 TGT ... - ReadM SNP 0024.scaffold00093 688249 1 T C - ReadM SNP 0024.scaffold00093 688401 1 A T - ReadM SNP 0024.scaffold00093 688554 1 T C - ReadM SNP 0024.scaffold00093 688717 1 C G - ReadM SNP 0024.scaffold00093 688773 1 T C - ReadM SNP 0024.scaffold00093 689202 1 T C - ReadM SNP 0024.scaffold00093 689512 1 G T - ReadM SNP 0024.scaffold00093 689566 1 T C - ReadM SNP 0024.scaffold00093 689650 1 T C - ReadM SNP 0024.scaffold00093 689766 1 C T - ReadM SNP 0024.scaffold00093 689772 1 C G - ReadM SNP 0024.scaffold00093 689828 1 C T - ReadM SNP 0024.scaffold00093 689830 1 A G - ReadM SNP 0024.scaffold00093 690149 1 T C - ReadM SNP 0024.scaffold00093 690248 1 G A - ReadM SNP 0024.scaffold00093 690345 1 A T - ReadM SNP 0024.scaffold00093 690367 1 C A - ReadM INDEL 0024.scaffold00093 690515 1 . A - ReadM SNP 0024.scaffold00093 690615 1 T A - ReadM SNP 0024.scaffold00093 691283 1 G C - ReadM SNP 0024.scaffold00093 691579 1 G C - ReadM SNP 0024.scaffold00093 691955 1 G A - ScafM SNP 0024.scaffold00093 692225 1 A T scaffold12538 ScafM SNP 0024.scaffold00093 692416 1 A C scaffold12538 ScafM SNP 0024.scaffold00093 692432 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 692534 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 692690 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 692733 1 A T scaffold12538 ScafM SNP 0024.scaffold00093 692744 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 692768 1 C A scaffold12538 ScafM SNP 0024.scaffold00093 692822 1 G C scaffold12538 ScafM SNP 0024.scaffold00093 692883 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 693322 1 G A scaffold12538 ReadM SNP 0024.scaffold00093 702179 1 C T - ReadM SNP 0024.scaffold00093 702407 1 A G - ReadM SNP 0024.scaffold00093 702681 1 T C - ReadM SNP 0024.scaffold00093 702738 1 C T - ReadM SNP 0024.scaffold00093 702881 1 A T - ReadM SNP 0024.scaffold00093 703069 1 G A - ReadM SNP 0024.scaffold00093 703448 1 G A - ReadM SNP 0024.scaffold00093 703452 1 G A - ReadM SNP 0024.scaffold00093 703588 1 A T - ReadM SNP 0024.scaffold00093 703628 1 A G - ReadM SNP 0024.scaffold00093 703730 1 T C - ReadM SNP 0024.scaffold00093 703804 1 T C - ReadM SNP 0024.scaffold00093 703842 1 G A - Both SNP 0024.scaffold00093 704505 1 T G scaffold12538 ReadM INDEL 0024.scaffold00093 704709 1 . T - ScafM INDEL 0024.scaffold00093 704709 2 .C TG scaffold12538 ScafM INDEL 0024.scaffold00093 704809 6 ...... TTAAAA scaffold12538 ScafM INDEL 0024.scaffold00093 704812 4 .... TTGT scaffold12538 ScafM SNP 0024.scaffold00093 704887 1 G T scaffold12538 ScafM SNP 0024.scaffold00093 704908 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 704944 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 705115 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 705294 1 C T scaffold12538 ScafM INDEL 0024.scaffold00093 705300 10 TTTTAAATAT .......... scaffold12538 ScafM INDEL 0024.scaffold00093 705312 1 A . scaffold12538 ScafM INDEL 0024.scaffold00093 705316 1 G . scaffold12538 ScafM INDEL 0024.scaffold00093 705318 2 GA .. scaffold12538 ScafM INDEL 0024.scaffold00093 705322 3 CGA ... scaffold12538 ScafM INDEL 0024.scaffold00093 705326 4 ACAC .... scaffold12538 ScafM INDEL 0024.scaffold00093 705332 4 GTTC .... scaffold12538 ScafM INDEL 0024.scaffold00093 705337 2 TT .. scaffold12538 ScafM INDEL 0024.scaffold00093 705340 4 TTTC .... scaffold12538 ScafM INDEL 0024.scaffold00093 705345 12 GTTTTTTTTTTC ............ scaffold12538 ScafM SNP 0024.scaffold00093 705370 1 C T scaffold12538 ScafM INDEL 0024.scaffold00093 705400 2 .. AT scaffold12538 ScafM SNP 0024.scaffold00093 705533 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 705550 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 705559 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 705571 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 705676 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 705691 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 705709 1 G C scaffold12538 ScafM SNP 0024.scaffold00093 705731 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 705752 1 A C scaffold12538 ScafM SNP 0024.scaffold00093 705760 1 A G scaffold12538 ScafM INDEL 0024.scaffold00093 705764 1 A . scaffold12538 ScafM INDEL 0024.scaffold00093 705855 1 . A scaffold12538 Both SNP 0024.scaffold00093 705964 1 C T scaffold12538 Both SNP 0024.scaffold00093 705968 1 A C scaffold12538 Both SNP 0024.scaffold00093 705986 1 A G scaffold12538 Both SNP 0024.scaffold00093 706008 1 T C scaffold12538 Both SNP 0024.scaffold00093 706094 1 A G scaffold12538 Both SNP 0024.scaffold00093 706100 1 C T scaffold12538 Both INDEL 0024.scaffold00093 706175 1 T . scaffold12538 ScafM SNP 0024.scaffold00093 706177 1 A C scaffold12538 Both SNP 0024.scaffold00093 706216 1 G C scaffold12538 ScafM INDEL 0024.scaffold00093 706394 7 TTAGGTT ....... scaffold12538 Both SNP 0024.scaffold00093 706410 1 A T scaffold12538 Both SNP 0024.scaffold00093 706417 1 T G scaffold12538 ScafM INDEL 0024.scaffold00093 706518 7 ACTTCTA ....... scaffold12538 Both SNP 0024.scaffold00093 706694 1 C A scaffold12538 Both SNP 0024.scaffold00093 706703 1 C G scaffold12538 Both SNP 0024.scaffold00093 706811 1 G C scaffold12538 ScafM SNP 0024.scaffold00093 706817 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 706842 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 706851 1 T A scaffold12538 ScafM SNP 0024.scaffold00093 706870 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 706913 1 A C scaffold12538 ScafM SNP 0024.scaffold00093 706921 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 706960 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 706998 1 T C scaffold12538 Both SNP 0024.scaffold00093 707043 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 707068 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 707073 1 A C scaffold12538 ScafM SNP 0024.scaffold00093 707098 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 707105 1 T A scaffold12538 Both SNP 0024.scaffold00093 707150 1 G A scaffold12538 Both SNP 0024.scaffold00093 707169 1 T A scaffold12538 Both SNP 0024.scaffold00093 707177 1 A T scaffold12538 Both SNP 0024.scaffold00093 707223 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 707264 1 T A scaffold12538 Both SNP 0024.scaffold00093 707595 1 T A scaffold12538 Both SNP 0024.scaffold00093 707955 1 T C scaffold12538 Both SNP 0024.scaffold00093 708057 1 T C scaffold12538 Both SNP 0024.scaffold00093 708117 1 C A scaffold12538 Both SNP 0024.scaffold00093 708359 1 T G scaffold12538 ScafM INDEL 0024.scaffold00093 708525 1 . T scaffold12538 ScafM INDEL 0024.scaffold00093 708532 1 . A scaffold12538 ScafM SNP 0024.scaffold00093 708574 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 708612 1 G C scaffold12538 ScafM INDEL 0024.scaffold00093 708622 2 .. TA scaffold12538 ScafM SNP 0024.scaffold00093 708644 1 A G scaffold12538 ScafM INDEL 0024.scaffold00093 708651 1 T . scaffold12538 ScafM SNP 0024.scaffold00093 708654 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 708674 1 T C scaffold12538 ScafM INDEL 0024.scaffold00093 708692 2 .. TA scaffold12538 ScafM SNP 0024.scaffold00093 708693 1 C G scaffold12538 Both SNP 0024.scaffold00093 708756 1 A G scaffold12538 Both SNP 0024.scaffold00093 708779 1 T A scaffold12538 Both SNP 0024.scaffold00093 708792 1 G T scaffold12538 ScafM SNP 0024.scaffold00093 708812 1 T G scaffold12538 ScafM SNP 0024.scaffold00093 708824 1 C A scaffold12538 ScafM SNP 0024.scaffold00093 708830 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 709237 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 709250 1 C G scaffold12538 ScafM SNP 0024.scaffold00093 709259 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 709307 1 C A scaffold12538 ScafM INDEL 0024.scaffold00093 709326 2 .. CC scaffold12538 ScafM SNP 0024.scaffold00093 709327 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 709329 1 T G scaffold12538 ScafM SNP 0024.scaffold00093 709332 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 709335 1 T C scaffold12538 Both SNP 0024.scaffold00093 709544 1 T C scaffold12538 Both SNP 0024.scaffold00093 709565 1 A G scaffold12538 Both SNP 0024.scaffold00093 709619 1 A C scaffold12538 ScafM INDEL 0024.scaffold00093 709721 7 ....... ACTTAGC scaffold12538 Both SNP 0024.scaffold00093 709732 1 C T scaffold12538 Both SNP 0024.scaffold00093 709741 1 T C scaffold12538 Both SNP 0024.scaffold00093 709824 1 C T scaffold12538 Both SNP 0024.scaffold00093 709854 1 T A scaffold12538 Both SNP 0024.scaffold00093 709860 1 G T scaffold12538 Both SNP 0024.scaffold00093 710008 1 C T scaffold12538 Both SNP 0024.scaffold00093 710081 1 C A scaffold12538 Both SNP 0024.scaffold00093 710428 1 C T scaffold12538 ScafM SNP 0024.scaffold00093 710543 1 G A scaffold12538 Both SNP 0024.scaffold00093 710556 1 C T scaffold12538 ScafM INDEL 0024.scaffold00093 710580 3 CTA ... scaffold12538 ScafM SNP 0024.scaffold00093 710613 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710619 1 C A scaffold12538 ScafM SNP 0024.scaffold00093 710626 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710641 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 710646 1 G A scaffold12538 ScafM SNP 0024.scaffold00093 710649 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710652 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710656 1 A G scaffold12538 ScafM SNP 0024.scaffold00093 710658 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710678 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710681 2 CG TA scaffold12538 ScafM INDEL 0024.scaffold00093 710686 1 T . scaffold12538 ScafM SNP 0024.scaffold00093 710704 2 GA CG scaffold12538 ScafM SNP 0024.scaffold00093 710710 1 G A scaffold12538 ScafM INDEL 0024.scaffold00093 710716 3 ... TGA scaffold12538 ScafM INDEL 0024.scaffold00093 710717 5 ..... TTTTG scaffold12538 ScafM SNP 0024.scaffold00093 710760 1 T C scaffold12538 ScafM SNP 0024.scaffold00093 710765 2 GT AC scaffold12538 ScafM INDEL 0024.scaffold00093 710779 5 CAAGC ...TT scaffold12538 ScafM SNP 0024.scaffold00093 710788 2 TA CG scaffold12538 ScafM SNP 0024.scaffold00093 710801 1 A G scaffold12538 ReadM SNP 0024.scaffold00093 711086 1 T C - ReadM SNP 0024.scaffold00093 711106 1 A G - ScafM SNP 0024.scaffold00093 712009 1 G T scaffold11676 ScafM SNP 0024.scaffold00093 712038 1 T C scaffold11676 ScafM SNP 0024.scaffold00093 712112 1 G A scaffold11676 ScafM SNP 0024.scaffold00093 712156 1 T C scaffold11676 ScafM SNP 0024.scaffold00093 712181 1 A T scaffold11676 ScafM INDEL 0024.scaffold00093 712185 1 C . scaffold11676 ScafM SNP 0024.scaffold00093 712196 1 G A scaffold11676 ScafM SNP 0024.scaffold00093 712244 1 T C scaffold11676 ReadM SNP 0024.scaffold00093 712971 1 C T - ReadM INDEL 0024.scaffold00093 713410 1 . T - ReadM SNP 0024.scaffold00093 714113 1 G A - ScafM INDEL 0025.scaffold00096 39220 1 . T scaffold21357 ScafM SNP 0025.scaffold00096 39222 1 C T scaffold21357 ScafM SNP 0025.scaffold00096 82444 1 A G scaffold3199 ScafM SNP 0025.scaffold00096 82493 1 G A scaffold3199 ScafM SNP 0025.scaffold00096 82580 1 T C scaffold3199 ScafM SNP 0025.scaffold00096 82616 1 C T scaffold3199 ScafM INDEL 0025.scaffold00096 95013 4 .... TTTT scaffold3199 ScafM INDEL 0025.scaffold00096 108219 1 . A scaffold3199 ScafM INDEL 0025.scaffold00096 109824 14 .............. CAGGATTTAGTTTG scaffold3199 ScafM SNP 0025.scaffold00096 109880 1 T C scaffold3199 ScafM SNP 0025.scaffold00096 109886 1 C T scaffold3199 ScafM SNP 0025.scaffold00096 112174 1 G A scaffold3199 ScafM SNP 0025.scaffold00096 112259 1 C T scaffold3199 ScafM INDEL 0025.scaffold00096 149839 1 . A scaffold1812 ScafM INDEL 0025.scaffold00096 154264 1 T . scaffold1812 ScafM INDEL 0025.scaffold00096 154268 1 T . scaffold1812 ScafM SNP 0025.scaffold00096 162044 1 T G scaffold1812 ScafM SNP 0025.scaffold00096 162114 1 G A scaffold1812 ScafM INDEL 0025.scaffold00096 173103 1 . C scaffold1812 ScafM INDEL 0025.scaffold00096 182528 1 . T scaffold1812 ScafM INDEL 0025.scaffold00096 182531 1 . T scaffold1812 ScafM INDEL 0025.scaffold00096 217611 1 . T scaffold40737 ScafM INDEL 0025.scaffold00096 218077 3 GCT ... scaffold23111 ReadM INDEL 0025.scaffold00096 219696 1 . T - ScafM INDEL 0025.scaffold00096 229242 19 TGTTGAATTGTTTTTTTTT ................... scaffold23111 ScafM INDEL 0025.scaffold00096 234380 1 . T scaffold23111 ScafM INDEL 0025.scaffold00096 234391 1 T . scaffold23111 ScafM SNP 0025.scaffold00096 234398 2 TA AT scaffold23111 ReadM SNP 0025.scaffold00096 242872 1 T G - ScafM INDEL 0025.scaffold00096 250481 1 . A scaffold23111 ScafM SNP 0025.scaffold00096 252360 1 A T scaffold73445 ScafM INDEL 0025.scaffold00096 260664 1 . A scaffold272 Both INDEL 0025.scaffold00096 263576 1 . T scaffold272 ReadM INDEL 0025.scaffold00096 271874 1 . T - ReadM INDEL 0025.scaffold00096 300671 1 . T - ScafM INDEL 0025.scaffold00096 306623 1 C . scaffold41917 ScafM SNP 0025.scaffold00096 306675 1 G A scaffold41917 ScafM SNP 0025.scaffold00096 306702 1 C T scaffold41917 ScafM INDEL 0025.scaffold00096 307124 1 . C scaffold41917 ScafM SNP 0025.scaffold00096 307197 1 G A scaffold41917 ScafM INDEL 0025.scaffold00096 307202 10 .......... TTCTCTCTGC scaffold41917 ScafM SNP 0025.scaffold00096 307628 1 C T scaffold41917 ScafM SNP 0025.scaffold00096 307635 1 A G scaffold41917 ScafM SNP 0025.scaffold00096 307648 1 C T scaffold41917 ScafM SNP 0025.scaffold00096 307696 1 G C scaffold41917 ScafM SNP 0025.scaffold00096 310119 1 C A scaffold3844 ReadM SNP 0025.scaffold00096 313337 1 G A - ScafM INDEL 0025.scaffold00096 338115 2 TT .. scaffold3844 ScafM INDEL 0025.scaffold00096 338119 9 TGATAATAT ......... scaffold3844 ScafM INDEL 0025.scaffold00096 338131 13 TTAGTTCCCTCGC ............. scaffold3844 ScafM INDEL 0025.scaffold00096 344986 1 . A scaffold3844 ScafM SNP 0025.scaffold00096 367599 1 C T scaffold2630 ScafM SNP 0025.scaffold00096 367608 1 A G scaffold2630 ScafM SNP 0025.scaffold00096 367616 1 T G scaffold2630 ScafM SNP 0025.scaffold00096 367622 1 T A scaffold2630 ScafM SNP 0025.scaffold00096 367664 1 G A scaffold2630 ScafM SNP 0025.scaffold00096 367673 1 C T scaffold2630 ScafM SNP 0025.scaffold00096 367697 1 A T scaffold2630 ReadM SNP 0025.scaffold00096 370213 1 C T - ScafM SNP 0025.scaffold00096 377902 1 C A scaffold965 ScafM SNP 0025.scaffold00096 377972 1 T C scaffold965 ReadM INDEL 0026.scaffold00103 624 2 TT .. - ReadM SNP 0026.scaffold00103 744 1 A T - ReadM SNP 0026.scaffold00103 864 1 A T - Both SNP 0026.scaffold00103 1101 1 G T scaffold2822 Both SNP 0026.scaffold00103 1132 1 G T scaffold2822 Both SNP 0026.scaffold00103 1139 1 A G scaffold2822 Both SNP 0026.scaffold00103 1217 1 T G scaffold2822 Both SNP 0026.scaffold00103 1240 1 C T scaffold2822 ScafM INDEL 0026.scaffold00103 1260 1 G . scaffold2822 Both SNP 0026.scaffold00103 1265 1 G A scaffold2822 Both SNP 0026.scaffold00103 1285 1 A T scaffold2822 ReadM SNP 0026.scaffold00103 1639 1 A G - ReadM SNP 0026.scaffold00103 1719 1 A G - ReadM SNP 0026.scaffold00103 1970 1 C T - ReadM SNP 0026.scaffold00103 1974 1 C A - ReadM SNP 0026.scaffold00103 1979 1 G A - ReadM SNP 0026.scaffold00103 2057 1 T A - ReadM SNP 0026.scaffold00103 2157 1 G A - ReadM SNP 0026.scaffold00103 2238 1 A C - ReadM SNP 0026.scaffold00103 2268 1 T C - ReadM SNP 0026.scaffold00103 2956 1 T A - ReadM SNP 0026.scaffold00103 3027 1 A T - ReadM SNP 0026.scaffold00103 3044 1 A C - ReadM SNP 0026.scaffold00103 3059 1 A C - ReadM SNP 0026.scaffold00103 3287 1 T C - ReadM SNP 0026.scaffold00103 3384 1 A T - ReadM SNP 0026.scaffold00103 3400 1 G A - ReadM SNP 0026.scaffold00103 3521 1 T C - ReadM SNP 0026.scaffold00103 3537 1 A G - Both SNP 0026.scaffold00103 3644 1 T A scaffold2822 Both SNP 0026.scaffold00103 3935 1 G T scaffold2822 Both SNP 0026.scaffold00103 4319 1 T G scaffold2822 Both SNP 0026.scaffold00103 4531 1 G A scaffold2822 Both SNP 0026.scaffold00103 4559 1 C G scaffold2822 ReadM SNP 0026.scaffold00103 4648 1 A G - Both SNP 0026.scaffold00103 4716 1 T C scaffold2822 Both SNP 0026.scaffold00103 4953 1 G C scaffold2822 ScafM INDEL 0026.scaffold00103 4983 1 A . scaffold2822 ScafM INDEL 0026.scaffold00103 4989 4 .... TAAT scaffold2822 ScafM INDEL 0026.scaffold00103 5086 6 AAAAAC ...... scaffold2822 Both SNP 0026.scaffold00103 5112 1 C G scaffold2822 Both SNP 0026.scaffold00103 5155 1 T A scaffold2822 Both SNP 0026.scaffold00103 5181 1 T C scaffold2822 Both SNP 0026.scaffold00103 5303 1 G T scaffold2822 Both SNP 0026.scaffold00103 5351 1 T G scaffold2822 Both SNP 0026.scaffold00103 5358 1 A G scaffold2822 Both SNP 0026.scaffold00103 5409 1 G A scaffold2822 Both SNP 0026.scaffold00103 5416 1 C T scaffold2822 Both SNP 0026.scaffold00103 5488 1 C G scaffold2822 ReadM SNP 0026.scaffold00103 5549 1 G C - Both SNP 0026.scaffold00103 5812 1 G T scaffold2822 Both SNP 0026.scaffold00103 5898 1 C T scaffold2822 Both SNP 0026.scaffold00103 6012 1 T C scaffold2822 Both SNP 0026.scaffold00103 6165 1 G A scaffold2822 Both INDEL 0026.scaffold00103 6192 1 A . scaffold2822 Both SNP 0026.scaffold00103 6218 1 A T scaffold2822 Both SNP 0026.scaffold00103 6249 1 G A scaffold2822 Both SNP 0026.scaffold00103 6495 1 A G scaffold2822 Both SNP 0026.scaffold00103 6546 1 T G scaffold2822 ReadM SNP 0026.scaffold00103 6749 1 G A - ReadM SNP 0026.scaffold00103 6798 1 T G - ReadM INDEL 0026.scaffold00103 6973 1 A . - ReadM SNP 0026.scaffold00103 7253 1 C T - ReadM SNP 0026.scaffold00103 7337 1 A G - ReadM SNP 0026.scaffold00103 7482 1 A G - ReadM SNP 0026.scaffold00103 7593 1 T C - ReadM SNP 0026.scaffold00103 7976 1 T C - ReadM SNP 0026.scaffold00103 8089 1 G A - ScafM INDEL 0026.scaffold00103 8228 2 .. TT scaffold2822 ReadM SNP 0026.scaffold00103 8285 1 C T - ReadM SNP 0026.scaffold00103 8498 1 T G - ReadM SNP 0026.scaffold00103 8761 1 A C - ReadM SNP 0026.scaffold00103 8968 1 C T - ReadM SNP 0026.scaffold00103 9109 1 T A - ReadM SNP 0026.scaffold00103 9265 1 T C - ReadM SNP 0026.scaffold00103 9270 1 T G - ReadM INDEL 0026.scaffold00103 9456 1 . C - ReadM SNP 0026.scaffold00103 9505 1 G A - ReadM SNP 0026.scaffold00103 9604 1 C T - ReadM SNP 0026.scaffold00103 9634 1 G A - ReadM SNP 0026.scaffold00103 9957 1 C A - ReadM SNP 0026.scaffold00103 10006 1 G A - ReadM SNP 0026.scaffold00103 10276 1 T C - ReadM SNP 0026.scaffold00103 10506 1 G C - ReadM SNP 0026.scaffold00103 10539 1 G A - ReadM SNP 0026.scaffold00103 10552 1 A C - ReadM SNP 0026.scaffold00103 10638 1 C T - ReadM SNP 0026.scaffold00103 10900 1 T A - ReadM SNP 0026.scaffold00103 10949 1 A T - ReadM SNP 0026.scaffold00103 11244 1 G A - ReadM SNP 0026.scaffold00103 11379 1 G C - ReadM SNP 0026.scaffold00103 11397 1 T C - ReadM SNP 0026.scaffold00103 11470 1 T C - ReadM SNP 0026.scaffold00103 11538 1 C A - ReadM SNP 0026.scaffold00103 11651 1 G T - ReadM SNP 0026.scaffold00103 12035 1 A T - ReadM SNP 0026.scaffold00103 12149 1 G A - ReadM SNP 0026.scaffold00103 12183 1 T A - ReadM SNP 0026.scaffold00103 12270 1 T C - ReadM SNP 0026.scaffold00103 12381 1 G C - ReadM SNP 0026.scaffold00103 12632 1 T A - ReadM SNP 0026.scaffold00103 12635 1 G A - ReadM SNP 0026.scaffold00103 12712 1 G A - ReadM SNP 0026.scaffold00103 12851 1 T C - ReadM SNP 0026.scaffold00103 13106 1 G A - ReadM INDEL 0026.scaffold00103 13116 1 . A - ReadM SNP 0026.scaffold00103 13202 1 T C - ReadM SNP 0026.scaffold00103 13230 1 T C - ScafM SNP 0026.scaffold00103 13313 1 A C scaffold2822 ScafM SNP 0026.scaffold00103 13347 1 G A scaffold2822 ScafM INDEL 0026.scaffold00103 13391 2 AA .G scaffold2822 ScafM SNP 0026.scaffold00103 13400 1 A C scaffold2822 ScafM SNP 0026.scaffold00103 13415 1 G A scaffold2822 ScafM SNP 0026.scaffold00103 13483 1 C T scaffold2822 Both INDEL 0026.scaffold00103 13561 1 . A scaffold2822 ReadM SNP 0026.scaffold00103 14706 1 C T - ReadM SNP 0026.scaffold00103 14926 1 C T - ReadM SNP 0026.scaffold00103 16051 1 T G - ReadM SNP 0026.scaffold00103 16087 1 A G - ReadM SNP 0026.scaffold00103 16170 1 C G - ReadM SNP 0026.scaffold00103 16537 1 C G - ReadM SNP 0026.scaffold00103 16555 1 C A - ReadM SNP 0026.scaffold00103 16727 1 C T - ReadM SNP 0026.scaffold00103 17185 1 G A - ReadM SNP 0026.scaffold00103 17204 1 T C - ReadM SNP 0026.scaffold00103 17224 1 T C - ReadM SNP 0026.scaffold00103 17277 1 A G - ReadM SNP 0026.scaffold00103 17519 1 A C - ReadM SNP 0026.scaffold00103 17578 1 G A - ReadM SNP 0026.scaffold00103 17614 1 G A - ReadM SNP 0026.scaffold00103 17639 1 G T - ReadM SNP 0026.scaffold00103 17716 1 A G - ReadM SNP 0026.scaffold00103 17719 1 T G - ReadM SNP 0026.scaffold00103 17732 1 C A - ReadM SNP 0026.scaffold00103 17877 1 C T - ReadM SNP 0026.scaffold00103 18115 1 T C - ReadM SNP 0026.scaffold00103 18255 1 A G - ReadM SNP 0026.scaffold00103 18367 1 G A - ReadM SNP 0026.scaffold00103 18374 1 T G - ReadM SNP 0026.scaffold00103 18484 1 T G - ReadM SNP 0026.scaffold00103 18509 1 T G - ReadM SNP 0026.scaffold00103 18618 1 C A - ReadM SNP 0026.scaffold00103 18681 1 A T - ReadM SNP 0026.scaffold00103 18751 1 C A - ReadM SNP 0026.scaffold00103 18808 1 G C - ReadM SNP 0026.scaffold00103 18922 1 A G - ReadM SNP 0026.scaffold00103 18929 1 C A - ReadM SNP 0026.scaffold00103 19008 1 A T - ReadM SNP 0026.scaffold00103 19158 1 A G - ReadM SNP 0026.scaffold00103 19166 1 A C - ReadM SNP 0026.scaffold00103 19217 1 G A - ReadM SNP 0026.scaffold00103 19333 1 A T - ReadM SNP 0026.scaffold00103 19339 1 T G - ReadM SNP 0026.scaffold00103 19377 1 G C - ReadM SNP 0026.scaffold00103 19392 1 A G - ReadM SNP 0026.scaffold00103 19458 1 G A - ReadM SNP 0026.scaffold00103 19519 1 G A - ReadM SNP 0026.scaffold00103 19528 1 T C - Both INDEL 0026.scaffold00103 19580 1 . T scaffold2822 Both SNP 0026.scaffold00103 19645 1 C T scaffold2822 ScafM INDEL 0026.scaffold00103 19664 38 ...................................... GCAGCAACTGGGGCGAAACATGGAGGCTTATATTGATG scaffold2822 Both SNP 0026.scaffold00103 19714 1 G A scaffold2822 ReadM SNP 0026.scaffold00103 19805 1 T C - Both SNP 0026.scaffold00103 19864 1 A G scaffold2822 ReadM SNP 0026.scaffold00103 19962 1 T C - ReadM SNP 0026.scaffold00103 20216 1 T C - ReadM SNP 0026.scaffold00103 20224 1 C T - ReadM SNP 0026.scaffold00103 20408 1 C G - ReadM SNP 0026.scaffold00103 20776 1 T C - ReadM SNP 0026.scaffold00103 20977 1 G T - ReadM SNP 0026.scaffold00103 21031 1 A G - ReadM SNP 0026.scaffold00103 21480 1 G T - ReadM SNP 0026.scaffold00103 21482 1 C T - ReadM SNP 0026.scaffold00103 21508 1 C T - ReadM SNP 0026.scaffold00103 21526 1 A G - ReadM SNP 0026.scaffold00103 21533 1 C T - ScafM INDEL 0026.scaffold00103 21657 4 ATCG .... scaffold2822 ReadM SNP 0026.scaffold00103 21736 1 C T - ReadM SNP 0026.scaffold00103 21738 1 A G - ReadM SNP 0026.scaffold00103 21925 1 C A - ReadM SNP 0026.scaffold00103 22152 1 C A - ReadM SNP 0026.scaffold00103 22243 1 C G - ReadM SNP 0026.scaffold00103 22249 1 G C - Both SNP 0026.scaffold00103 22456 1 A T scaffold2822 Both SNP 0026.scaffold00103 22507 1 A G scaffold2822 Both SNP 0026.scaffold00103 22647 1 A T scaffold2822 ScafM SNP 0026.scaffold00103 22766 1 T A scaffold2822 Both SNP 0026.scaffold00103 22769 1 T C scaffold2822 ReadM SNP 0026.scaffold00103 22882 1 T G - ScafM SNP 0026.scaffold00103 22882 2 TG GC scaffold2822 ScafM INDEL 0026.scaffold00103 22912 28 GCCCAAAAACGTCCGGGTCGAAATATGG ............................ scaffold2822 ScafM SNP 0026.scaffold00103 22957 1 G A scaffold2822 ScafM SNP 0026.scaffold00103 22973 1 C T scaffold2822 ScafM SNP 0026.scaffold00103 23000 1 A T scaffold2822 Both SNP 0026.scaffold00103 23291 1 G A scaffold2822 Both SNP 0026.scaffold00103 23320 1 C T scaffold2822 Both SNP 0026.scaffold00103 23378 1 A G scaffold2822 ReadM SNP 0026.scaffold00103 23587 1 C T - ReadM SNP 0026.scaffold00103 23914 1 A T - Both SNP 0026.scaffold00103 23989 1 C G scaffold2822 Both SNP 0026.scaffold00103 23992 1 G T scaffold2822 Both SNP 0026.scaffold00103 24005 1 C T scaffold2822 Both SNP 0026.scaffold00103 24088 1 C G scaffold2822 Both SNP 0026.scaffold00103 24099 1 T C scaffold2822 Both SNP 0026.scaffold00103 24301 1 C A scaffold2822 Both SNP 0026.scaffold00103 24516 1 T G scaffold2822 Both SNP 0026.scaffold00103 24522 1 G A scaffold2822 Both SNP 0026.scaffold00103 24618 1 T C scaffold2822 Both SNP 0026.scaffold00103 24641 1 T G scaffold2822 Both SNP 0026.scaffold00103 24735 1 G C scaffold2822 Both SNP 0026.scaffold00103 24821 1 C T scaffold2822 Both SNP 0026.scaffold00103 24865 1 C T scaffold2822 Both SNP 0026.scaffold00103 24870 1 C A scaffold2822 Both INDEL 0026.scaffold00103 24910 1 G . scaffold2822 ReadM SNP 0026.scaffold00103 25123 1 G T - Both SNP 0026.scaffold00103 25262 1 T A scaffold2822 Both SNP 0026.scaffold00103 25315 1 C G scaffold2822 Both SNP 0026.scaffold00103 25335 1 A G scaffold2822 Both SNP 0026.scaffold00103 25414 1 G A scaffold2822 ReadM SNP 0026.scaffold00103 25488 1 G T - ReadM SNP 0026.scaffold00103 25504 1 G C - Both SNP 0026.scaffold00103 25557 1 G A scaffold2822 Both SNP 0026.scaffold00103 25573 1 C T scaffold2822 Both SNP 0026.scaffold00103 25613 1 A G scaffold2822 Both SNP 0026.scaffold00103 25619 1 T A scaffold2822 Both SNP 0026.scaffold00103 25628 1 A C scaffold2822 Both SNP 0026.scaffold00103 25768 1 T C scaffold2822 Both SNP 0026.scaffold00103 25806 1 A G scaffold2822 Both SNP 0026.scaffold00103 25814 1 G C scaffold2822 Both SNP 0026.scaffold00103 25853 1 C T scaffold2822 Both SNP 0026.scaffold00103 26107 1 G T scaffold2822 Both SNP 0026.scaffold00103 26131 1 G T scaffold2822 Both SNP 0026.scaffold00103 26143 1 T A scaffold2822 Both SNP 0026.scaffold00103 26179 1 A G scaffold2822 Both SNP 0026.scaffold00103 26282 1 G A scaffold2822 Both SNP 0026.scaffold00103 26452 1 T G scaffold2822 Both SNP 0026.scaffold00103 26649 1 A C scaffold2822 Both SNP 0026.scaffold00103 26652 1 T A scaffold2822 Both SNP 0026.scaffold00103 26660 1 A G scaffold2822 Both SNP 0026.scaffold00103 26784 1 A G scaffold2822 Both SNP 0026.scaffold00103 26808 1 G A scaffold2822 Both INDEL 0026.scaffold00103 26861 1 C . scaffold2822 Both INDEL 0026.scaffold00103 26999 1 . A scaffold2822 Both SNP 0026.scaffold00103 27019 1 G A scaffold2822 Both SNP 0026.scaffold00103 27034 1 T C scaffold2822 Both SNP 0026.scaffold00103 27205 1 T C scaffold2822 Both SNP 0026.scaffold00103 27529 1 A G scaffold2822 Both SNP 0026.scaffold00103 27598 1 A G scaffold2822 Both SNP 0026.scaffold00103 27863 1 G A scaffold2822 Both SNP 0026.scaffold00103 27889 1 T G scaffold2822 Both SNP 0026.scaffold00103 27904 1 A T scaffold2822 Both SNP 0026.scaffold00103 27937 1 C T scaffold2822 Both SNP 0026.scaffold00103 27951 1 G A scaffold2822 Both SNP 0026.scaffold00103 28006 1 T A scaffold2822 Both SNP 0026.scaffold00103 28081 1 C T scaffold2822 Both SNP 0026.scaffold00103 28207 1 A T scaffold2822 Both SNP 0026.scaffold00103 28267 1 T C scaffold2822 Both SNP 0026.scaffold00103 28353 1 C T scaffold2822 Both SNP 0026.scaffold00103 28359 1 T G scaffold2822 ScafM SNP 0026.scaffold00103 28644 2 CC TT scaffold2822 ScafM SNP 0026.scaffold00103 28710 2 CG TT scaffold2822 Both SNP 0026.scaffold00103 28736 1 C G scaffold2822 Both SNP 0026.scaffold00103 28772 1 G A scaffold2822 Both SNP 0026.scaffold00103 28858 1 A G scaffold2822 Both SNP 0026.scaffold00103 29106 1 C T scaffold2822 Both SNP 0026.scaffold00103 29213 1 C T scaffold2822 Both SNP 0026.scaffold00103 29229 1 T C scaffold2822 Both SNP 0026.scaffold00103 29707 1 A G scaffold2822 Both SNP 0026.scaffold00103 29765 1 T C scaffold2822 Both SNP 0026.scaffold00103 29823 1 A G scaffold2822 ScafM INDEL 0026.scaffold00103 29862 4 AGGG .... scaffold2822 ScafM INDEL 0026.scaffold00103 29874 13 TTTGGTGGAACCT ............. scaffold2822 Both INDEL 0026.scaffold00103 29990 2 AA .. scaffold2822 Both SNP 0026.scaffold00103 30160 1 T C scaffold2822 Both SNP 0026.scaffold00103 30164 1 T C scaffold2822 ReadM SNP 0026.scaffold00103 30184 1 G C - ReadM SNP 0026.scaffold00103 30238 1 A G - Both SNP 0026.scaffold00103 30251 1 A T scaffold2822 Both SNP 0026.scaffold00103 30299 1 G A scaffold2822 Both SNP 0026.scaffold00103 30311 1 A G scaffold2822 Both SNP 0026.scaffold00103 30418 1 A T scaffold2822 Both SNP 0026.scaffold00103 30459 1 G A scaffold2822 ScafM INDEL 0026.scaffold00103 30747 6 AATAGT ...... scaffold2822 ScafM SNP 0026.scaffold00103 30758 1 G T scaffold2822 Both SNP 0026.scaffold00103 30840 1 A G scaffold2822 Both SNP 0026.scaffold00103 30884 1 A C scaffold2822 Both SNP 0026.scaffold00103 31634 1 C G scaffold2822 ReadM SNP 0026.scaffold00103 31718 1 T G - ReadM SNP 0026.scaffold00103 31970 1 T C - ReadM SNP 0026.scaffold00103 32015 1 G A - ReadM SNP 0026.scaffold00103 32124 1 G A - ReadM SNP 0026.scaffold00103 32149 1 T C - ReadM SNP 0026.scaffold00103 32159 1 A G - ReadM SNP 0026.scaffold00103 32444 1 G A - ReadM SNP 0026.scaffold00103 32743 1 G T - ReadM SNP 0026.scaffold00103 32996 1 T C - ReadM SNP 0026.scaffold00103 33423 1 G A - ReadM SNP 0026.scaffold00103 33512 1 G A - ReadM SNP 0026.scaffold00103 33581 1 A G - ReadM SNP 0026.scaffold00103 33641 1 G A - ReadM SNP 0026.scaffold00103 33756 1 C T - ReadM SNP 0026.scaffold00103 33818 1 T G - ReadM SNP 0026.scaffold00103 34279 1 T A - ReadM SNP 0026.scaffold00103 34832 1 T G - ReadM SNP 0026.scaffold00103 34840 1 T C - ReadM SNP 0026.scaffold00103 34886 1 G T - ReadM SNP 0026.scaffold00103 35022 1 C T - ReadM SNP 0026.scaffold00103 35129 1 A G - ReadM SNP 0026.scaffold00103 35279 1 A C - ReadM SNP 0026.scaffold00103 35300 1 A C - ReadM SNP 0026.scaffold00103 35614 1 C T - ReadM SNP 0026.scaffold00103 35620 1 T G - ReadM SNP 0026.scaffold00103 35631 1 T A - ReadM INDEL 0026.scaffold00103 35660 2 .. TG - ReadM SNP 0026.scaffold00103 35717 1 G A - ReadM SNP 0026.scaffold00103 35789 1 T G - ReadM SNP 0026.scaffold00103 35979 1 G C - ReadM SNP 0026.scaffold00103 36133 1 C T - ReadM SNP 0026.scaffold00103 36137 1 G A - ReadM SNP 0026.scaffold00103 36200 1 C T - Both SNP 0026.scaffold00103 36226 1 C T scaffold2822 Both SNP 0026.scaffold00103 36327 1 C G scaffold2822 Both INDEL 0026.scaffold00103 36476 1 T . scaffold2822 ScafM SNP 0026.scaffold00103 36506 2 AT TC scaffold2822 Both SNP 0026.scaffold00103 36531 1 G T scaffold2822 Both SNP 0026.scaffold00103 36560 1 G C scaffold2822 Both SNP 0026.scaffold00103 36692 1 G T scaffold2822 Both SNP 0026.scaffold00103 36803 1 A G scaffold2822 Both SNP 0026.scaffold00103 37042 1 T A scaffold2822 Both SNP 0026.scaffold00103 37047 1 C G scaffold2822 Both SNP 0026.scaffold00103 37181 1 C T scaffold2822 Both SNP 0026.scaffold00103 37280 1 C A scaffold2822 Both SNP 0026.scaffold00103 37406 1 C T scaffold2822 Both SNP 0026.scaffold00103 37417 1 A T scaffold2822 Both SNP 0026.scaffold00103 37450 1 G T scaffold2822 Both SNP 0026.scaffold00103 37526 1 G C scaffold2822 Both SNP 0026.scaffold00103 37590 1 T C scaffold2822 Both SNP 0026.scaffold00103 37744 1 C T scaffold2822 Both SNP 0026.scaffold00103 37789 1 A G scaffold2822 Both SNP 0026.scaffold00103 37791 1 T C scaffold2822 ReadM SNP 0026.scaffold00103 38102 1 T C - ReadM SNP 0026.scaffold00103 38196 1 T C - ReadM SNP 0026.scaffold00103 38212 1 A G - ReadM SNP 0026.scaffold00103 38288 1 A G - ReadM SNP 0026.scaffold00103 38327 1 T G - ReadM INDEL 0026.scaffold00103 38387 2 TG .. - ReadM SNP 0026.scaffold00103 38511 1 T G - ReadM SNP 0026.scaffold00103 38585 1 A G - ReadM SNP 0026.scaffold00103 38623 1 T C - ReadM SNP 0026.scaffold00103 38625 1 G A - ReadM SNP 0026.scaffold00103 38745 1 A G - ReadM SNP 0026.scaffold00103 38800 1 C G - ReadM SNP 0026.scaffold00103 38877 1 G C - ReadM SNP 0026.scaffold00103 38919 1 T A - ReadM SNP 0026.scaffold00103 38954 1 C A - ReadM SNP 0026.scaffold00103 38963 1 C G - ReadM SNP 0026.scaffold00103 39006 1 A G - ReadM SNP 0026.scaffold00103 39063 1 A G - ReadM SNP 0026.scaffold00103 39152 1 A C - ReadM SNP 0026.scaffold00103 39181 1 G A - ReadM SNP 0026.scaffold00103 39369 1 G T - ReadM INDEL 0026.scaffold00103 39920 1 . G - ReadM SNP 0026.scaffold00103 40013 1 G A - ReadM SNP 0026.scaffold00103 40073 1 G T - ReadM SNP 0026.scaffold00103 40093 1 T C - ReadM SNP 0026.scaffold00103 40483 1 G A - ReadM SNP 0026.scaffold00103 40782 1 T C - ReadM SNP 0026.scaffold00103 40862 1 C A - ReadM SNP 0026.scaffold00103 41011 1 G T - ReadM SNP 0026.scaffold00103 41105 1 A G - ReadM SNP 0026.scaffold00103 41108 1 T C - ReadM SNP 0026.scaffold00103 41141 1 C G - ReadM SNP 0026.scaffold00103 41144 1 A G - ReadM SNP 0026.scaffold00103 41308 1 T C - ReadM SNP 0026.scaffold00103 41383 1 T C - ReadM SNP 0026.scaffold00103 41559 1 A G - ReadM INDEL 0026.scaffold00103 42024 1 A . - ReadM SNP 0026.scaffold00103 42223 1 C T - ScafM SNP 0026.scaffold00103 42270 1 G A scaffold2822 Both SNP 0026.scaffold00103 42421 1 C A scaffold2822 Both SNP 0026.scaffold00103 42561 1 G A scaffold2822 Both SNP 0026.scaffold00103 42740 1 A T scaffold2822 ScafM SNP 0026.scaffold00103 43148 1 A C scaffold2822 ScafM INDEL 0026.scaffold00103 43272 4 .... ACCT scaffold2822 ScafM SNP 0026.scaffold00103 45843 1 T G scaffold2822 ScafM SNP 0026.scaffold00103 45958 1 A T scaffold2822 ScafM SNP 0026.scaffold00103 46071 1 T A scaffold2822 ScafM INDEL 0026.scaffold00103 46154 1 . A scaffold2822 Both SNP 0026.scaffold00103 46275 1 G A scaffold2822 Both SNP 0026.scaffold00103 46317 1 G C scaffold2822 Both SNP 0026.scaffold00103 46412 1 T C scaffold2822 ScafM SNP 0026.scaffold00103 46472 2 CG AT scaffold2822 Both SNP 0026.scaffold00103 46489 1 A C scaffold2822 Both INDEL 0026.scaffold00103 46567 1 A . scaffold2822 Both SNP 0026.scaffold00103 46658 1 A G scaffold2822 ScafM SNP 0026.scaffold00103 46665 2 GT AG scaffold2822 ScafM SNP 0026.scaffold00103 46716 1 C T scaffold2822 ScafM SNP 0026.scaffold00103 46870 1 T C scaffold2822 Both INDEL 0026.scaffold00103 48070 1 . A scaffold2822 ScafM SNP 0026.scaffold00103 48076 1 C A scaffold2822 Both INDEL 0026.scaffold00103 48141 2 CT .. scaffold2822 ScafM SNP 0026.scaffold00103 48239 1 A G scaffold2822 ScafM SNP 0026.scaffold00103 48243 1 A T scaffold2822 ScafM INDEL 0026.scaffold00103 48269 2 .. AA scaffold2822 ScafM SNP 0026.scaffold00103 48292 1 A G scaffold2822 ScafM SNP 0026.scaffold00103 48379 1 C A scaffold2822 ScafM INDEL 0026.scaffold00103 48383 2 AG .. scaffold2822 ScafM INDEL 0026.scaffold00103 48636 1 C . scaffold2822 ScafM SNP 0026.scaffold00103 48693 1 A T scaffold2822 ScafM INDEL 0026.scaffold00103 48716 1 G . scaffold2822 ScafM SNP 0026.scaffold00103 48908 1 T A scaffold2822 ScafM INDEL 0026.scaffold00103 48987 1 . T scaffold2822 ScafM SNP 0026.scaffold00103 50148 1 T A scaffold2822 ScafM INDEL 0026.scaffold00103 50183 2 .. TT scaffold2822 ScafM INDEL 0026.scaffold00103 50286 2 AA .. scaffold2822 ScafM SNP 0026.scaffold00103 50374 1 A G scaffold2822 ScafM SNP 0026.scaffold00103 50379 1 C T scaffold2822 Both SNP 0026.scaffold00103 50432 1 T C scaffold2822 Both SNP 0026.scaffold00103 50476 1 C G scaffold2822 Both SNP 0026.scaffold00103 50746 1 A G scaffold2822 Both SNP 0026.scaffold00103 50891 1 G C scaffold2822 Both SNP 0026.scaffold00103 50987 1 G C scaffold2822 ScafM SNP 0026.scaffold00103 53953 1 T C scaffold12496 ScafM SNP 0026.scaffold00103 53957 1 A G scaffold12496 ScafM SNP 0026.scaffold00103 53970 1 T C scaffold12496 ScafM SNP 0026.scaffold00103 53981 1 T A scaffold12496 ScafM SNP 0026.scaffold00103 53995 2 TG CA scaffold12496 ScafM INDEL 0026.scaffold00103 54017 3 ... AGT scaffold12496 ScafM INDEL 0026.scaffold00103 54027 3 ... CAA scaffold12496 ScafM SNP 0026.scaffold00103 54029 1 T A scaffold12496 ScafM INDEL 0026.scaffold00103 54034 3 AAG ... scaffold12496 ScafM SNP 0026.scaffold00103 54038 2 TT CA scaffold12496 ScafM INDEL 0026.scaffold00103 54042 1 . G scaffold12496 ScafM INDEL 0026.scaffold00103 54066 8 ........ TATATATA scaffold12496 ScafM SNP 0026.scaffold00103 54146 1 A T scaffold12496 ScafM SNP 0026.scaffold00103 54895 1 G T scaffold12496 ScafM SNP 0026.scaffold00103 54924 1 T G scaffold12496 ScafM INDEL 0026.scaffold00103 54925 1 . T scaffold12496 ScafM SNP 0026.scaffold00103 54936 1 T A scaffold12496 ScafM INDEL 0026.scaffold00103 54976 1 A . scaffold12496 ScafM SNP 0026.scaffold00103 54978 2 AA CC scaffold12496 ScafM INDEL 0026.scaffold00103 54989 14 AAAGTGAGAGAGAA .............. scaffold12496 ScafM SNP 0026.scaffold00103 55023 1 G C scaffold12496 ScafM INDEL 0026.scaffold00103 55034 2 AT .. scaffold12496 ScafM INDEL 0026.scaffold00103 55059 12 TCGCTGACACTA ............ scaffold12496 ScafM SNP 0026.scaffold00103 55087 1 C G scaffold12496 ScafM SNP 0026.scaffold00103 55138 1 G A scaffold12496 ScafM SNP 0026.scaffold00103 55140 1 A T scaffold12496 ScafM SNP 0026.scaffold00103 55185 1 A G scaffold12496 ScafM SNP 0026.scaffold00103 55192 1 T G scaffold12496 ScafM SNP 0026.scaffold00103 55209 1 C T scaffold12496 ScafM SNP 0026.scaffold00103 57789 1 T C scaffold54547 ScafM SNP 0026.scaffold00103 57791 1 G A scaffold54547 ScafM SNP 0026.scaffold00103 57821 1 A G scaffold54547 ScafM INDEL 0026.scaffold00103 57870 8 ........ AATGCGTG scaffold54547 ScafM INDEL 0026.scaffold00103 57872 15 ............... CGGGGTGAGATCCGG scaffold54547 ScafM INDEL 0026.scaffold00103 57875 14 .............. GTTACTGGGTTCAT scaffold54547 ScafM SNP 0026.scaffold00103 57894 1 C A scaffold54547 ScafM SNP 0026.scaffold00103 57935 1 A C scaffold54547 ScafM SNP 0026.scaffold00103 57937 1 A G scaffold54547 ScafM SNP 0026.scaffold00103 57954 1 T G scaffold54547 ScafM SNP 0026.scaffold00103 57966 1 A G scaffold54547 ScafM SNP 0026.scaffold00103 57971 1 T C scaffold54547 ScafM SNP 0026.scaffold00103 57978 1 A G scaffold54547 ScafM SNP 0026.scaffold00103 57982 1 G A scaffold54547 ScafM SNP 0026.scaffold00103 57985 1 A G scaffold54547 ScafM SNP 0026.scaffold00103 58017 1 G A scaffold54547 ScafM SNP 0026.scaffold00103 58024 1 C T scaffold54547 ScafM SNP 0026.scaffold00103 58026 1 C G scaffold54547 ScafM SNP 0026.scaffold00103 58037 1 A G scaffold54547 ScafM SNP 0026.scaffold00103 58045 1 C A scaffold54547 ScafM SNP 0026.scaffold00103 64490 1 G A scaffold13960 ScafM SNP 0026.scaffold00103 64495 2 TA CT scaffold13960 ScafM SNP 0026.scaffold00103 64501 1 C T scaffold13960 ScafM SNP 0026.scaffold00103 64533 1 C A scaffold13960 ScafM SNP 0026.scaffold00103 64537 1 T A scaffold13960 ScafM SNP 0026.scaffold00103 64544 1 C G scaffold13960 ScafM SNP 0026.scaffold00103 64572 1 C A scaffold13960 ScafM SNP 0026.scaffold00103 64578 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64588 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64597 1 A T scaffold13960 ScafM SNP 0026.scaffold00103 64614 1 C G scaffold13960 ScafM SNP 0026.scaffold00103 64623 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64625 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64628 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64651 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64654 1 A C scaffold13960 ScafM SNP 0026.scaffold00103 64664 2 CT TC scaffold13960 ScafM INDEL 0026.scaffold00103 64670 1 A . scaffold13960 ScafM INDEL 0026.scaffold00103 64675 2 AA .. scaffold13960 ScafM SNP 0026.scaffold00103 64696 1 G A scaffold13960 ScafM INDEL 0026.scaffold00103 64703 3 GGC ... scaffold13960 ScafM SNP 0026.scaffold00103 64707 2 AA CC scaffold13960 ScafM SNP 0026.scaffold00103 64722 1 C A scaffold13960 ScafM SNP 0026.scaffold00103 64734 1 G A scaffold13960 ScafM SNP 0026.scaffold00103 64740 1 T A scaffold13960 ScafM SNP 0026.scaffold00103 64752 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 64800 1 A T scaffold13960 ScafM SNP 0026.scaffold00103 64811 1 A G scaffold13960 ScafM SNP 0026.scaffold00103 92890 1 G A scaffold24384 ScafM INDEL 0026.scaffold00103 92933 1 . C scaffold24384 ScafM SNP 0026.scaffold00103 92964 1 T C scaffold24384 ScafM SNP 0026.scaffold00103 92976 2 TT CC scaffold24384 ScafM SNP 0026.scaffold00103 92984 1 A G scaffold24384 ScafM SNP 0026.scaffold00103 93027 1 C A scaffold24384 ScafM SNP 0026.scaffold00103 93064 2 TC AG scaffold24384 ScafM SNP 0026.scaffold00103 93155 1 A T scaffold24384 ScafM SNP 0026.scaffold00103 93159 1 T C scaffold24384 ScafM SNP 0026.scaffold00103 97494 1 G T scaffold2822 ScafM SNP 0026.scaffold00103 97653 1 C T scaffold2822 ScafM SNP 0026.scaffold00103 97656 1 A G scaffold2822 ScafM SNP 0026.scaffold00103 97737 1 T C scaffold2822 ScafM SNP 0026.scaffold00103 97773 1 C A scaffold2822 ReadM SNP 0026.scaffold00103 97990 1 A C - ReadM SNP 0026.scaffold00103 97997 1 T C - ReadM SNP 0026.scaffold00103 98058 1 T C - ReadM SNP 0026.scaffold00103 98084 1 T C - ReadM SNP 0026.scaffold00103 98090 1 G T - ReadM SNP 0026.scaffold00103 98203 1 C T - ReadM SNP 0026.scaffold00103 98218 1 G A - ReadM SNP 0026.scaffold00103 98285 1 T C - ReadM SNP 0026.scaffold00103 98294 1 G C - ReadM SNP 0026.scaffold00103 98317 1 C T - ReadM SNP 0026.scaffold00103 98364 1 A G - ReadM SNP 0026.scaffold00103 98368 1 C T - ReadM SNP 0026.scaffold00103 98378 1 C T - ReadM SNP 0026.scaffold00103 98461 1 T C - ReadM SNP 0026.scaffold00103 98505 1 A G - ReadM SNP 0026.scaffold00103 98573 1 G A - Both SNP 0026.scaffold00103 98788 1 C T scaffold2822 ReadM SNP 0026.scaffold00103 98807 1 C T - Both SNP 0026.scaffold00103 98978 1 G A scaffold2822 Both SNP 0026.scaffold00103 99029 1 C T scaffold2822 Both SNP 0026.scaffold00103 99102 1 T A scaffold2822 Both SNP 0026.scaffold00103 99113 1 G A scaffold2822 Both SNP 0026.scaffold00103 99118 1 G C scaffold2822 Both SNP 0026.scaffold00103 99251 1 G A scaffold2822 Both SNP 0026.scaffold00103 99269 1 T C scaffold2822 Both SNP 0026.scaffold00103 99360 1 A C scaffold2822 Both SNP 0026.scaffold00103 99383 1 G T scaffold2822 Both SNP 0026.scaffold00103 99431 1 T C scaffold2822 Both SNP 0026.scaffold00103 99508 1 T A scaffold2822 Both SNP 0026.scaffold00103 99657 1 A G scaffold2822 Both SNP 0026.scaffold00103 99663 1 G A scaffold2822 Both SNP 0026.scaffold00103 99674 1 G T scaffold2822 ScafM INDEL 0026.scaffold00103 99731 19 ................... ACAAGTTTTCCAAATGAGT scaffold2822 Both SNP 0026.scaffold00103 99895 1 A G scaffold2822 Both SNP 0026.scaffold00103 100088 1 A C scaffold2822 Both SNP 0026.scaffold00103 100192 1 C A scaffold2822 Both SNP 0026.scaffold00103 100419 1 G A scaffold2822 Both SNP 0026.scaffold00103 100442 1 G A scaffold2822 Both SNP 0026.scaffold00103 100586 1 G A scaffold2822 ReadM SNP 0026.scaffold00103 100687 1 A G - Both SNP 0026.scaffold00103 100762 1 C G scaffold2822 Both SNP 0026.scaffold00103 100770 1 C T scaffold2822 ReadM SNP 0026.scaffold00103 100819 1 T C - ReadM SNP 0026.scaffold00103 100871 1 A T - ReadM SNP 0026.scaffold00103 101238 1 A C - ReadM INDEL 0026.scaffold00103 101473 1 A . - ReadM SNP 0026.scaffold00103 101597 1 C G - ReadM SNP 0026.scaffold00103 102039 1 T C - ReadM SNP 0026.scaffold00103 102129 1 A C - ReadM SNP 0026.scaffold00103 102463 1 A G - ReadM SNP 0026.scaffold00103 102660 1 G C - ReadM SNP 0026.scaffold00103 102928 1 T C - ReadM SNP 0026.scaffold00103 102950 1 T G - ReadM SNP 0026.scaffold00103 102990 1 C T - ReadM SNP 0026.scaffold00103 103118 1 T C - ReadM SNP 0026.scaffold00103 103274 1 A G - ReadM SNP 0026.scaffold00103 103316 1 A G - ReadM SNP 0026.scaffold00103 103497 1 T C - ReadM SNP 0026.scaffold00103 103697 1 A G - ReadM SNP 0026.scaffold00103 103754 1 G T - ReadM SNP 0026.scaffold00103 103804 1 T C - ReadM SNP 0026.scaffold00103 103901 1 C G - ReadM SNP 0026.scaffold00103 103910 1 C T - ReadM SNP 0026.scaffold00103 103927 1 A C - ReadM SNP 0026.scaffold00103 103951 1 T C - ReadM SNP 0026.scaffold00103 104018 1 T C - ReadM SNP 0026.scaffold00103 104022 1 G T - ReadM SNP 0026.scaffold00103 104080 1 A T - ReadM SNP 0026.scaffold00103 104203 1 G A - ReadM SNP 0026.scaffold00103 104218 1 C A - ReadM SNP 0026.scaffold00103 104292 1 C G - ReadM SNP 0026.scaffold00103 104374 1 T C - ReadM SNP 0026.scaffold00103 104454 1 A T - ReadM SNP 0026.scaffold00103 104462 1 C A - ReadM SNP 0026.scaffold00103 104483 1 C T - ReadM SNP 0026.scaffold00103 104531 1 G A - ReadM INDEL 0026.scaffold00103 104634 1 G . - ReadM SNP 0026.scaffold00103 104648 1 T C - ReadM SNP 0026.scaffold00103 104766 1 T C - ReadM SNP 0026.scaffold00103 104982 1 T C - ReadM SNP 0026.scaffold00103 105116 1 C T - ReadM SNP 0026.scaffold00103 105242 1 G T - ReadM SNP 0026.scaffold00103 105284 2 CA TG - ReadM INDEL 0026.scaffold00103 105621 1 A . - Both SNP 0026.scaffold00103 105868 1 T C scaffold2822 Both SNP 0026.scaffold00103 105884 1 G A scaffold2822 Both SNP 0026.scaffold00103 106061 1 T C scaffold2822 ReadM SNP 0026.scaffold00103 106383 1 G A - ReadM SNP 0026.scaffold00103 109108 1 C T - ReadM SNP 0026.scaffold00103 109512 1 T C - ReadM INDEL 0026.scaffold00103 109546 2 AG .. - ScafM INDEL 0026.scaffold00103 110024 1 . T scaffold20038 Both SNP 0026.scaffold00103 110187 1 T G scaffold20038 Both SNP 0026.scaffold00103 110198 1 G A scaffold20038 Both SNP 0026.scaffold00103 110245 1 A C scaffold20038 ScafM SNP 0026.scaffold00103 110321 1 G A scaffold20038 Both SNP 0026.scaffold00103 110708 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 111350 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 111373 1 A G scaffold20038 Both SNP 0026.scaffold00103 112950 1 A C scaffold20038 ReadM INDEL 0026.scaffold00103 113107 3 TTT ... - ReadM SNP 0026.scaffold00103 113223 1 C G - ReadM SNP 0026.scaffold00103 113541 1 C A - ReadM SNP 0026.scaffold00103 113845 1 G A - ReadM SNP 0026.scaffold00103 113891 1 A C - ScafM SNP 0026.scaffold00103 114317 1 A C scaffold20038 ScafM SNP 0026.scaffold00103 114350 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 115274 1 C G scaffold20038 Both SNP 0026.scaffold00103 115500 1 A G scaffold20038 Both SNP 0026.scaffold00103 115521 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 115561 2 TT AA scaffold20038 Both SNP 0026.scaffold00103 115613 1 T G scaffold20038 ScafM INDEL 0026.scaffold00103 115936 1 T . scaffold20038 Both SNP 0026.scaffold00103 116057 1 G A scaffold20038 Both SNP 0026.scaffold00103 116320 1 T C scaffold20038 Both SNP 0026.scaffold00103 116448 1 C A scaffold20038 Both SNP 0026.scaffold00103 116464 1 G A scaffold20038 Both SNP 0026.scaffold00103 116479 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 116529 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 116539 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 116585 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 116802 1 G A scaffold20038 ReadM SNP 0026.scaffold00103 120751 1 T A - ReadM SNP 0026.scaffold00103 120789 1 A G - ReadM SNP 0026.scaffold00103 121116 1 A T - ReadM INDEL 0026.scaffold00103 121397 1 G . - ReadM SNP 0026.scaffold00103 121447 1 G A - ReadM SNP 0026.scaffold00103 121536 1 T A - ReadM SNP 0026.scaffold00103 121615 1 A G - ReadM SNP 0026.scaffold00103 121640 1 A G - ReadM SNP 0026.scaffold00103 121825 1 G A - ReadM SNP 0026.scaffold00103 121954 1 A G - ReadM SNP 0026.scaffold00103 122131 1 C T - ReadM SNP 0026.scaffold00103 122316 1 G T - ReadM SNP 0026.scaffold00103 122339 1 T C - ReadM SNP 0026.scaffold00103 122361 1 G A - ReadM SNP 0026.scaffold00103 122626 1 A G - ReadM SNP 0026.scaffold00103 122792 1 C A - ReadM SNP 0026.scaffold00103 123050 1 A G - ReadM SNP 0026.scaffold00103 126851 1 T C - ReadM SNP 0026.scaffold00103 127086 1 G A - ReadM SNP 0026.scaffold00103 127272 1 C A - ReadM SNP 0026.scaffold00103 127550 1 T A - ReadM SNP 0026.scaffold00103 127569 1 T C - ReadM SNP 0026.scaffold00103 127585 1 C T - ReadM SNP 0026.scaffold00103 127653 1 A G - ReadM SNP 0026.scaffold00103 127806 1 A G - ReadM INDEL 0026.scaffold00103 127953 1 . A - ReadM INDEL 0026.scaffold00103 128007 1 A . - ReadM SNP 0026.scaffold00103 128157 1 A G - ReadM SNP 0026.scaffold00103 128385 1 G A - ReadM SNP 0026.scaffold00103 128514 1 A C - ReadM SNP 0026.scaffold00103 128595 1 T C - ReadM SNP 0026.scaffold00103 128845 1 A G - ReadM SNP 0026.scaffold00103 128937 1 C T - ReadM SNP 0026.scaffold00103 128957 1 C T - ReadM SNP 0026.scaffold00103 129122 1 G C - ReadM SNP 0026.scaffold00103 129338 1 G A - ReadM SNP 0026.scaffold00103 129341 1 G C - ReadM SNP 0026.scaffold00103 129448 1 A G - ReadM SNP 0026.scaffold00103 129460 1 C T - ReadM SNP 0026.scaffold00103 129528 1 G A - ReadM INDEL 0026.scaffold00103 129782 1 . A - ReadM SNP 0026.scaffold00103 129875 1 A C - ReadM SNP 0026.scaffold00103 130006 1 G A - ReadM SNP 0026.scaffold00103 130022 1 A G - ReadM SNP 0026.scaffold00103 130177 1 C T - ScafM INDEL 0026.scaffold00103 130405 1 . C scaffold20038 ScafM INDEL 0026.scaffold00103 130415 1 A . scaffold20038 ScafM SNP 0026.scaffold00103 130454 1 A C scaffold20038 ScafM INDEL 0026.scaffold00103 130457 4 .... TTTA scaffold20038 ReadM SNP 0026.scaffold00103 130579 1 G A - ReadM SNP 0026.scaffold00103 130656 1 A G - Both SNP 0026.scaffold00103 131180 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 131252 1 A T scaffold20038 Both INDEL 0026.scaffold00103 131417 1 T . scaffold20038 ScafM SNP 0026.scaffold00103 131504 1 T A scaffold20038 Both SNP 0026.scaffold00103 131568 1 T G scaffold20038 Both SNP 0026.scaffold00103 131675 1 A G scaffold20038 Both SNP 0026.scaffold00103 131731 1 G T scaffold20038 ReadM SNP 0026.scaffold00103 132211 1 A G - ReadM SNP 0026.scaffold00103 132324 1 T C - ReadM SNP 0026.scaffold00103 132375 1 A G - ReadM SNP 0026.scaffold00103 132383 1 C T - ReadM SNP 0026.scaffold00103 132551 1 C T - ReadM SNP 0026.scaffold00103 132704 1 G A - ReadM INDEL 0026.scaffold00103 132744 1 A . - Both SNP 0026.scaffold00103 132867 1 A C scaffold20038 Both SNP 0026.scaffold00103 133004 1 C G scaffold20038 ReadM SNP 0026.scaffold00103 133034 1 G A - Both INDEL 0026.scaffold00103 133583 1 . T scaffold20038 ScafM SNP 0026.scaffold00103 133889 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 133936 1 G C scaffold20038 ScafM SNP 0026.scaffold00103 134027 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 134055 1 C G scaffold20038 Both SNP 0026.scaffold00103 134064 1 T A scaffold20038 ScafM INDEL 0026.scaffold00103 134073 1 G . scaffold20038 Both SNP 0026.scaffold00103 134097 1 G A scaffold20038 ReadM SNP 0026.scaffold00103 134228 1 C T - Both SNP 0026.scaffold00103 134257 1 A G scaffold20038 Both SNP 0026.scaffold00103 134287 1 G A scaffold20038 Both SNP 0026.scaffold00103 134532 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 134887 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 134942 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 135115 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 135153 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 135180 1 C G scaffold20038 ScafM SNP 0026.scaffold00103 135215 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 135236 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 135247 1 G T scaffold20038 ScafM INDEL 0026.scaffold00103 135252 1 . A scaffold20038 ScafM SNP 0026.scaffold00103 135266 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 135718 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 135731 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 135753 1 A G scaffold20038 ScafM INDEL 0026.scaffold00103 135788 1 . G scaffold20038 ScafM SNP 0026.scaffold00103 135790 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 135805 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 135810 1 G C scaffold20038 ScafM SNP 0026.scaffold00103 135821 1 G A scaffold20038 Both SNP 0026.scaffold00103 135844 1 G T scaffold20038 ScafM SNP 0026.scaffold00103 135959 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 135970 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 135974 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 135992 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 135997 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136012 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 136014 1 G T scaffold20038 ScafM SNP 0026.scaffold00103 136023 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136032 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 136042 1 G C scaffold20038 ScafM SNP 0026.scaffold00103 136066 2 CT AG scaffold20038 ScafM INDEL 0026.scaffold00103 136074 2 .. AT scaffold20038 Both SNP 0026.scaffold00103 136082 1 A C scaffold20038 Both SNP 0026.scaffold00103 136104 1 A G scaffold20038 Both SNP 0026.scaffold00103 136210 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 136242 2 CC GG scaffold20038 ScafM SNP 0026.scaffold00103 136256 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 136284 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136318 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 136322 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 136348 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 136354 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136357 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136363 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136366 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136385 1 C T scaffold20038 ScafM INDEL 0026.scaffold00103 136402 5 TTTAA ..... scaffold20038 ScafM SNP 0026.scaffold00103 136413 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136428 2 TT CC scaffold20038 ScafM INDEL 0026.scaffold00103 136433 1 C . scaffold20038 ScafM SNP 0026.scaffold00103 136439 2 AA GG scaffold20038 ScafM SNP 0026.scaffold00103 136461 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136480 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 136482 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136496 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 136516 1 T G scaffold20038 ScafM SNP 0026.scaffold00103 136548 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 136561 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136599 1 C G scaffold20038 ScafM SNP 0026.scaffold00103 136674 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 136679 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136682 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 136720 1 T G scaffold20038 ScafM INDEL 0026.scaffold00103 136740 1 . C scaffold20038 ScafM INDEL 0026.scaffold00103 136748 3 ..G TAC scaffold20038 ScafM SNP 0026.scaffold00103 136789 1 A G scaffold20038 ScafM INDEL 0026.scaffold00103 136806 1 T . scaffold20038 ScafM SNP 0026.scaffold00103 136836 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 136850 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 136876 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 136899 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 136928 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 136931 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 136978 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137028 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 137061 2 TA GC scaffold20038 ScafM SNP 0026.scaffold00103 137092 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 137117 1 C G scaffold20038 ScafM SNP 0026.scaffold00103 137119 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137124 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 137128 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 137143 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137190 2 CT TC scaffold20038 ScafM SNP 0026.scaffold00103 137224 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 137245 1 G T scaffold20038 ScafM SNP 0026.scaffold00103 137247 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 137258 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 137266 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 137290 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 137343 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 137582 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137598 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137603 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 137653 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137660 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 137677 1 A T scaffold20038 ScafM SNP 0026.scaffold00103 137679 1 C A scaffold20038 ScafM SNP 0026.scaffold00103 137700 2 CC TA scaffold20038 ScafM SNP 0026.scaffold00103 137708 2 AA TG scaffold20038 ScafM INDEL 0026.scaffold00103 137714 4 .... ATAC scaffold20038 ScafM SNP 0026.scaffold00103 137720 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 137789 1 T C scaffold20038 ScafM INDEL 0026.scaffold00103 137803 2 TA .. scaffold20038 ScafM SNP 0026.scaffold00103 137813 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 137837 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 137840 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138097 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138116 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138122 1 G T scaffold20038 Both SNP 0026.scaffold00103 138183 1 A C scaffold20038 Both SNP 0026.scaffold00103 138212 1 A G scaffold20038 Both SNP 0026.scaffold00103 138219 1 A G scaffold20038 Both SNP 0026.scaffold00103 138291 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138323 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 138325 3 CAT TGG scaffold20038 ScafM SNP 0026.scaffold00103 138331 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138352 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 138372 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 138443 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 138465 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 138489 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 138505 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 138510 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138515 1 G C scaffold20038 ScafM SNP 0026.scaffold00103 138539 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 138548 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 138590 1 G T scaffold20038 ScafM SNP 0026.scaffold00103 138610 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138626 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 138639 1 A G scaffold20038 ScafM SNP 0026.scaffold00103 138661 1 C T scaffold20038 ScafM SNP 0026.scaffold00103 138672 1 G A scaffold20038 ScafM SNP 0026.scaffold00103 138716 1 T A scaffold20038 ScafM SNP 0026.scaffold00103 138881 1 T C scaffold20038 ScafM SNP 0026.scaffold00103 138886 1 C G scaffold20038 ScafM INDEL 0027.scaffold00104 7242 1 T . scaffold1847 ScafM SNP 0027.scaffold00104 12960 1 C T scaffold2372 ScafM SNP 0027.scaffold00104 12997 1 A T scaffold2372 ScafM INDEL 0027.scaffold00104 12998 2 .. TT scaffold2372 ScafM INDEL 0027.scaffold00104 13183 2 .. GC scaffold2372 ScafM INDEL 0027.scaffold00104 13184 1 . C scaffold2372 ScafM INDEL 0027.scaffold00104 13185 1 . G scaffold2372 ScafM INDEL 0027.scaffold00104 13186 1 . G scaffold2372 ScafM INDEL 0027.scaffold00104 13187 4 .... TTGA scaffold2372 ScafM INDEL 0027.scaffold00104 13189 9 ......... TTTTGTTTG scaffold2372 ScafM INDEL 0027.scaffold00104 13190 5 ..... AATTT scaffold2372 ScafM INDEL 0027.scaffold00104 13192 5 ..... CGCTG scaffold2372 ScafM INDEL 0027.scaffold00104 13194 3 ... TTC scaffold2372 ScafM INDEL 0027.scaffold00104 13198 5 ..... AAACT scaffold2372 ScafM SNP 0027.scaffold00104 13212 1 G C scaffold2372 ScafM SNP 0027.scaffold00104 13249 1 C G scaffold2372 ScafM SNP 0027.scaffold00104 13532 1 A G scaffold2372 ScafM SNP 0027.scaffold00104 13639 1 T A scaffold2372 ScafM INDEL 0027.scaffold00104 13678 1 . A scaffold2372 ScafM SNP 0027.scaffold00104 14021 1 A C scaffold1847 ScafM SNP 0027.scaffold00104 14195 1 T G scaffold1847 ScafM SNP 0027.scaffold00104 14220 1 C T scaffold1847 ScafM SNP 0027.scaffold00104 15118 1 C T scaffold1847 ScafM SNP 0027.scaffold00104 15719 1 C T scaffold1847 ScafM SNP 0027.scaffold00104 15876 1 G C scaffold1847 ScafM SNP 0027.scaffold00104 15991 1 A T scaffold1847 ScafM INDEL 0027.scaffold00104 16179 1 . T scaffold1847 ScafM SNP 0027.scaffold00104 17417 1 T C scaffold1847 ScafM SNP 0027.scaffold00104 17781 1 A G scaffold1847 ScafM SNP 0027.scaffold00104 18093 1 A G scaffold1847 ScafM SNP 0027.scaffold00104 18247 1 T G scaffold1847 ScafM SNP 0027.scaffold00104 19052 1 A G scaffold1847 ScafM SNP 0027.scaffold00104 19315 1 C T scaffold1847 ScafM INDEL 0027.scaffold00104 19756 4 .... ATGC scaffold1847 ScafM INDEL 0027.scaffold00104 20097 7 ....... ATTGTCA scaffold1847 ScafM INDEL 0027.scaffold00104 20908 15 ............... CTGCTTTCATGAGCA scaffold1847 ScafM SNP 0027.scaffold00104 21052 1 T G scaffold1847 ScafM INDEL 0027.scaffold00104 21211 5 ..... ATGAC scaffold1847 ScafM SNP 0027.scaffold00104 21225 1 A T scaffold1847 ScafM SNP 0027.scaffold00104 21245 1 C T scaffold1847 ScafM SNP 0027.scaffold00104 21280 1 A G scaffold1847 ScafM SNP 0027.scaffold00104 21663 1 A G scaffold1847 ReadM SNP 0027.scaffold00104 23020 1 T C - ScafM SNP 0027.scaffold00104 28216 1 G A scaffold1847 ScafM SNP 0027.scaffold00104 28429 1 T A scaffold1847 ScafM SNP 0027.scaffold00104 28630 1 A T scaffold1847 ScafM SNP 0027.scaffold00104 28850 1 G T scaffold1847 ScafM INDEL 0027.scaffold00104 29119 1 A . scaffold1847 ScafM SNP 0027.scaffold00104 29366 1 A G scaffold1847 ScafM SNP 0027.scaffold00104 29370 1 T C scaffold1847 ScafM SNP 0027.scaffold00104 29585 1 C A scaffold1847 ScafM INDEL 0027.scaffold00104 29726 1 . A scaffold1847 ScafM SNP 0027.scaffold00104 29750 1 G A scaffold1847 ScafM SNP 0027.scaffold00104 30511 1 A G scaffold1847 ReadM SNP 0027.scaffold00104 36272 1 A G - ScafM SNP 0027.scaffold00104 51786 1 T G scaffold9562 ScafM INDEL 0027.scaffold00104 52385 5 ..... CACAA scaffold9562 ScafM SNP 0027.scaffold00104 52452 1 T C scaffold9562 ScafM INDEL 0027.scaffold00104 52719 1 . T scaffold9562 ScafM INDEL 0027.scaffold00104 53963 1 T . scaffold9562 ScafM INDEL 0027.scaffold00104 53999 62 .............................................................. TTGTATTTGCTGGATGTCATGACATTTTTCCTACTCATATCACCTCAAATATAATGAGGGAA scaffold9562 ScafM INDEL 0027.scaffold00104 54799 12 ATATTATGACTT ............ scaffold9562 ScafM SNP 0027.scaffold00104 55110 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 55217 1 A G scaffold9562 ScafM INDEL 0027.scaffold00104 55261 51 ................................................... TACTCTGTTTGATCTGTACTTGAAGATAATAACTAATTAGTGAATTTTTTT scaffold9562 ScafM SNP 0027.scaffold00104 55373 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 55400 1 A C scaffold9562 ScafM SNP 0027.scaffold00104 55520 1 A C scaffold9562 ScafM SNP 0027.scaffold00104 55702 1 G A scaffold9562 ScafM SNP 0027.scaffold00104 55735 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 55879 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 56064 1 T A scaffold9562 ScafM SNP 0027.scaffold00104 56144 1 C T scaffold9562 ScafM SNP 0027.scaffold00104 56290 1 G A scaffold9562 ScafM SNP 0027.scaffold00104 57181 1 A T scaffold9562 ScafM SNP 0027.scaffold00104 57263 1 G T scaffold9562 ScafM SNP 0027.scaffold00104 57265 1 A G scaffold9562 ScafM SNP 0027.scaffold00104 57634 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 57695 1 T A scaffold9562 ScafM INDEL 0027.scaffold00104 57795 3 GAA ... scaffold9562 ScafM INDEL 0027.scaffold00104 57804 9 TCCTTCCTA ......... scaffold9562 ScafM SNP 0027.scaffold00104 58158 1 T G scaffold9562 ScafM SNP 0027.scaffold00104 58177 1 C T scaffold9562 ScafM SNP 0027.scaffold00104 58314 1 G A scaffold9562 ScafM SNP 0027.scaffold00104 58349 1 A G scaffold9562 ScafM SNP 0027.scaffold00104 58631 1 A G scaffold9562 ScafM INDEL 0027.scaffold00104 59101 1 . T scaffold9562 ScafM SNP 0027.scaffold00104 59238 1 G A scaffold9562 ScafM SNP 0027.scaffold00104 59551 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 59798 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 59829 1 T C scaffold9562 ScafM INDEL 0027.scaffold00104 60137 1 C . scaffold9562 ScafM SNP 0027.scaffold00104 60162 1 C T scaffold9562 ScafM INDEL 0027.scaffold00104 60319 1 T . scaffold9562 ScafM SNP 0027.scaffold00104 60855 1 A G scaffold9562 ScafM INDEL 0027.scaffold00104 61032 1 T . scaffold9562 ScafM SNP 0027.scaffold00104 61272 1 C T scaffold9562 ScafM SNP 0027.scaffold00104 62919 1 G T C19741872 ScafM SNP 0027.scaffold00104 62959 1 A G C19741872 ScafM SNP 0027.scaffold00104 63267 1 G C C19741872 ScafM SNP 0027.scaffold00104 63647 1 G A C19741872 ScafM SNP 0027.scaffold00104 63656 1 T G C19741872 ScafM SNP 0027.scaffold00104 63982 1 A T C19741872 ScafM SNP 0027.scaffold00104 64112 1 C A C19741872 ScafM SNP 0027.scaffold00104 64237 1 A T C19741872 ScafM SNP 0027.scaffold00104 64470 1 C T C19741872 ScafM SNP 0027.scaffold00104 65348 1 C T scaffold9562 ScafM SNP 0027.scaffold00104 65400 2 TG AT scaffold9562 ScafM SNP 0027.scaffold00104 65433 1 G A scaffold9562 ScafM SNP 0027.scaffold00104 66627 1 A G scaffold9562 ScafM SNP 0027.scaffold00104 67200 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 67221 1 A C scaffold9562 ScafM SNP 0027.scaffold00104 67342 1 T C scaffold9562 ScafM INDEL 0027.scaffold00104 67357 1 T . scaffold9562 ScafM SNP 0027.scaffold00104 68221 1 C T scaffold9562 ScafM INDEL 0027.scaffold00104 68506 2 AC .. scaffold9562 ScafM SNP 0027.scaffold00104 68696 1 T C scaffold9562 ScafM SNP 0027.scaffold00104 69040 1 G A scaffold41647 ScafM SNP 0027.scaffold00104 71296 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 71305 1 T A scaffold10027 ScafM INDEL 0027.scaffold00104 72204 1 . T scaffold10027 ScafM SNP 0027.scaffold00104 72279 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 73182 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 73208 1 T C scaffold10027 ScafM SNP 0027.scaffold00104 73723 1 T C scaffold10027 ScafM SNP 0027.scaffold00104 74386 1 C G scaffold10027 ScafM SNP 0027.scaffold00104 74746 1 T A scaffold10027 ScafM SNP 0027.scaffold00104 75376 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 76725 1 C A scaffold10027 ScafM SNP 0027.scaffold00104 77040 1 T A scaffold10027 ScafM INDEL 0027.scaffold00104 77685 1 . T scaffold10027 ScafM SNP 0027.scaffold00104 78111 1 A T scaffold10027 ScafM SNP 0027.scaffold00104 78337 1 G T scaffold10027 ScafM INDEL 0027.scaffold00104 79253 3 TTT ... scaffold10027 ScafM SNP 0027.scaffold00104 79374 1 G A scaffold10027 ScafM SNP 0027.scaffold00104 79786 1 G A scaffold10027 ScafM SNP 0027.scaffold00104 79907 1 C A scaffold10027 ScafM SNP 0027.scaffold00104 80228 1 A C scaffold10027 ScafM SNP 0027.scaffold00104 80293 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 80515 1 A C scaffold10027 ScafM SNP 0027.scaffold00104 80689 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 84215 1 A C scaffold10027 ScafM SNP 0027.scaffold00104 84227 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 84545 1 G A scaffold10027 ScafM INDEL 0027.scaffold00104 84756 18 GCTTTACATATAACTGAC .................. scaffold10027 ScafM INDEL 0027.scaffold00104 85128 1 . A scaffold10027 ScafM SNP 0027.scaffold00104 85262 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 85787 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 87017 1 T C scaffold10027 ScafM SNP 0027.scaffold00104 87174 1 T C scaffold10027 ScafM SNP 0027.scaffold00104 87370 1 T C scaffold10027 ScafM INDEL 0027.scaffold00104 87433 1 . A scaffold10027 ScafM SNP 0027.scaffold00104 87815 1 T C scaffold10027 ScafM SNP 0027.scaffold00104 89023 1 G A scaffold10027 ScafM INDEL 0027.scaffold00104 89205 79 ............................................................................... TCTATCCAGTCATAGCCCACGTGTCGTCCACCGCTCACGCCGGAAATTAACAAACAACCACTAGCCGACTACCGCTTTA scaffold10027 ScafM INDEL 0027.scaffold00104 89919 1 T . scaffold10027 ScafM INDEL 0027.scaffold00104 91112 14 TTAGGTTAATAATA .............. scaffold10027 ScafM INDEL 0027.scaffold00104 91317 1 . C scaffold10027 ScafM SNP 0027.scaffold00104 91653 1 C A scaffold10027 ScafM SNP 0027.scaffold00104 103501 1 C G scaffold10027 ScafM SNP 0027.scaffold00104 104403 1 C A scaffold10027 ScafM SNP 0027.scaffold00104 104838 1 G A scaffold10027 ScafM SNP 0027.scaffold00104 104847 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 105149 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 105854 1 T G scaffold10027 ScafM SNP 0027.scaffold00104 106044 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 106079 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 106144 1 T G scaffold10027 ScafM SNP 0027.scaffold00104 106272 1 G A scaffold10027 ScafM SNP 0027.scaffold00104 106542 1 A G scaffold10027 ScafM INDEL 0027.scaffold00104 107920 5 ..... CGGCC scaffold10027 ScafM SNP 0027.scaffold00104 108363 1 C A scaffold52988 ScafM SNP 0027.scaffold00104 108383 1 A C scaffold52988 ScafM INDEL 0027.scaffold00104 108400 5 ..... TACTA scaffold52988 ScafM SNP 0027.scaffold00104 108449 1 G A scaffold52988 ScafM SNP 0027.scaffold00104 113213 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 113432 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 113793 1 G C scaffold10027 ScafM SNP 0027.scaffold00104 113945 1 A C scaffold10027 ScafM SNP 0027.scaffold00104 114964 1 A T scaffold10027 ScafM SNP 0027.scaffold00104 116132 1 C G scaffold10027 ScafM SNP 0027.scaffold00104 116314 1 G T scaffold10027 ScafM SNP 0027.scaffold00104 119360 1 G A scaffold10027 ScafM SNP 0027.scaffold00104 119548 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 119895 1 G T scaffold10027 ScafM SNP 0027.scaffold00104 122989 1 T G scaffold10027 ScafM SNP 0027.scaffold00104 123038 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 123304 1 A G scaffold10027 ScafM SNP 0027.scaffold00104 123518 1 C T scaffold10027 ScafM SNP 0027.scaffold00104 124250 1 A G scaffold10027 ScafM INDEL 0027.scaffold00104 127747 1 C . scaffold5990 ScafM SNP 0027.scaffold00104 128108 1 C T scaffold5990 ScafM SNP 0027.scaffold00104 129121 1 A G scaffold5990 ScafM SNP 0027.scaffold00104 129172 1 T C scaffold5990 ScafM SNP 0027.scaffold00104 129191 1 G C scaffold5990 ScafM INDEL 0027.scaffold00104 129425 1 . T scaffold5990 ScafM SNP 0027.scaffold00104 134534 1 T A scaffold5990 ScafM INDEL 0027.scaffold00104 136420 1 C . scaffold5990 ScafM INDEL 0027.scaffold00104 137606 4 .... CATT scaffold5990 ScafM SNP 0027.scaffold00104 137993 1 G A scaffold5990 ScafM SNP 0027.scaffold00104 138049 1 T C scaffold5990 ScafM SNP 0027.scaffold00104 138070 1 C G scaffold5990 ScafM SNP 0027.scaffold00104 138080 1 C T scaffold5990 ScafM SNP 0027.scaffold00104 138128 1 A G scaffold5990 ScafM SNP 0027.scaffold00104 138142 1 C T scaffold5990 ScafM SNP 0027.scaffold00104 138314 1 A C scaffold5990 ScafM SNP 0027.scaffold00104 138316 1 C A scaffold5990 ScafM INDEL 0027.scaffold00104 138350 1 A . scaffold5990 ScafM SNP 0027.scaffold00104 138814 1 G C scaffold5990 ScafM SNP 0027.scaffold00104 139006 1 A C scaffold5990 ScafM SNP 0027.scaffold00104 139088 1 T C scaffold5990 ScafM SNP 0027.scaffold00104 139262 1 A C scaffold5990 ScafM SNP 0027.scaffold00104 139786 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 139803 1 T G scaffold1428 ScafM SNP 0027.scaffold00104 139814 1 C A scaffold1428 ScafM SNP 0027.scaffold00104 139831 1 C T scaffold1428 ScafM INDEL 0027.scaffold00104 139848 1 . A scaffold1428 ScafM SNP 0027.scaffold00104 139871 1 A G scaffold1428 ScafM INDEL 0027.scaffold00104 139935 1 . T scaffold1428 ScafM SNP 0027.scaffold00104 139946 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 139966 1 T C scaffold1428 ScafM SNP 0027.scaffold00104 140037 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 140146 1 C T scaffold1428 ScafM SNP 0027.scaffold00104 140152 1 A C scaffold1428 ScafM SNP 0027.scaffold00104 140165 1 A G scaffold1428 ScafM SNP 0027.scaffold00104 140169 1 A C scaffold1428 ScafM SNP 0027.scaffold00104 140263 1 A G scaffold1428 ScafM SNP 0027.scaffold00104 140311 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 140335 1 C A scaffold1428 ScafM SNP 0027.scaffold00104 140459 1 A C scaffold1428 ScafM SNP 0027.scaffold00104 140468 1 C T scaffold1428 ScafM SNP 0027.scaffold00104 140471 1 C T scaffold1428 ScafM SNP 0027.scaffold00104 140489 1 C A scaffold1428 ScafM SNP 0027.scaffold00104 140495 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 140524 1 A C scaffold1428 ScafM SNP 0027.scaffold00104 140602 1 C T scaffold1428 ScafM INDEL 0027.scaffold00104 140605 2 .. AA scaffold1428 ScafM INDEL 0027.scaffold00104 140611 1 . A scaffold1428 ScafM SNP 0027.scaffold00104 140629 1 T A scaffold1428 ScafM SNP 0027.scaffold00104 140818 1 T C scaffold1428 ScafM SNP 0027.scaffold00104 140838 1 G A scaffold1428 ScafM SNP 0027.scaffold00104 140840 1 A G scaffold1428 ScafM INDEL 0027.scaffold00104 140853 3 ... TTA scaffold1428 ScafM SNP 0027.scaffold00104 140859 1 A G scaffold1428 ScafM SNP 0027.scaffold00104 140921 1 T C scaffold1428 ScafM INDEL 0027.scaffold00104 147018 1 G . scaffold5990 ScafM SNP 0027.scaffold00104 148927 1 A T scaffold5990 ScafM SNP 0027.scaffold00104 149900 1 A C scaffold5990 ScafM INDEL 0027.scaffold00104 150233 1 G . scaffold5990 ScafM SNP 0027.scaffold00104 153651 1 G A scaffold5990 ScafM SNP 0027.scaffold00104 155853 1 T G scaffold5990 ScafM SNP 0027.scaffold00104 165016 1 C T scaffold5990 ScafM SNP 0027.scaffold00104 165712 1 C T scaffold5990 ScafM SNP 0027.scaffold00104 166931 1 C A scaffold5990 ScafM SNP 0027.scaffold00104 167088 1 T G scaffold5990 ScafM SNP 0027.scaffold00104 167228 1 T A scaffold5990 ScafM SNP 0027.scaffold00104 167321 1 A G scaffold5990 ScafM SNP 0027.scaffold00104 167338 1 C T scaffold5990 ScafM INDEL 0027.scaffold00104 168103 1 A . scaffold5990 ScafM SNP 0027.scaffold00104 168445 1 T A scaffold5990 ScafM SNP 0027.scaffold00104 172804 1 G A scaffold68692 ScafM SNP 0027.scaffold00104 172833 1 T C scaffold68692 ScafM SNP 0027.scaffold00104 172876 1 C A scaffold68692 ScafM SNP 0027.scaffold00104 173261 1 A G scaffold68692 ScafM SNP 0027.scaffold00104 173435 1 T A scaffold68692 ScafM SNP 0027.scaffold00104 173456 1 T C scaffold68692 ScafM SNP 0027.scaffold00104 173491 1 G A scaffold68692 ScafM SNP 0027.scaffold00104 173752 1 A G scaffold68692 ScafM SNP 0027.scaffold00104 177244 1 C T C19695007 ScafM SNP 0027.scaffold00104 177267 1 G C C19695007 ScafM SNP 0027.scaffold00104 178277 1 C G scaffold20210 ScafM SNP 0027.scaffold00104 180616 1 G A scaffold22160 ScafM SNP 0027.scaffold00104 183954 1 T C scaffold22160 ScafM SNP 0027.scaffold00104 184015 1 T G scaffold22160 ScafM SNP 0027.scaffold00104 184102 1 G T scaffold22160 ScafM INDEL 0027.scaffold00104 189015 1 . A scaffold22160 ScafM SNP 0027.scaffold00104 189054 1 C A scaffold22160 ScafM SNP 0027.scaffold00104 190046 1 T C scaffold22160 ScafM INDEL 0027.scaffold00104 190271 1 T . scaffold22160 ScafM SNP 0027.scaffold00104 190351 1 C T scaffold22160 ScafM SNP 0027.scaffold00104 192071 1 G A scaffold22160 ScafM SNP 0027.scaffold00104 192347 1 C T scaffold22160 ScafM SNP 0027.scaffold00104 192601 1 T C scaffold22160 ScafM INDEL 0027.scaffold00104 192659 1 . A scaffold22160 ScafM SNP 0027.scaffold00104 192809 1 A G scaffold22160 ScafM SNP 0027.scaffold00104 193355 1 G T scaffold22160 ScafM SNP 0027.scaffold00104 194853 1 C T scaffold22160 ScafM SNP 0027.scaffold00104 194860 1 G C scaffold22160 ScafM INDEL 0027.scaffold00104 208558 1 . T scaffold25193 ScafM SNP 0027.scaffold00104 208564 1 A T scaffold25193 ScafM INDEL 0027.scaffold00104 208583 5 ..... GCATA scaffold25193 ScafM INDEL 0027.scaffold00104 208591 1 . A scaffold25193 ScafM SNP 0027.scaffold00104 208615 1 A G scaffold25193 ScafM SNP 0027.scaffold00104 208617 1 C T scaffold25193 ScafM SNP 0027.scaffold00104 208623 1 C T scaffold25193 ScafM INDEL 0027.scaffold00104 208625 1 T . scaffold25193 ScafM SNP 0027.scaffold00104 208631 1 A T scaffold25193 ScafM SNP 0027.scaffold00104 208639 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208643 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208648 1 T A scaffold25193 ScafM SNP 0027.scaffold00104 208662 2 GT TC scaffold25193 ScafM INDEL 0027.scaffold00104 208716 1 T . scaffold25193 ScafM SNP 0027.scaffold00104 208722 1 A G scaffold25193 ScafM SNP 0027.scaffold00104 208751 1 G A scaffold25193 ScafM SNP 0027.scaffold00104 208755 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208781 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208783 1 G T scaffold25193 ScafM SNP 0027.scaffold00104 208795 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208797 1 T A scaffold25193 ScafM SNP 0027.scaffold00104 208880 1 C T scaffold25193 ScafM SNP 0027.scaffold00104 208883 1 G C scaffold25193 ScafM SNP 0027.scaffold00104 208887 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208900 1 G A scaffold25193 ScafM SNP 0027.scaffold00104 208902 1 T A scaffold25193 ScafM SNP 0027.scaffold00104 208904 1 C T scaffold25193 ScafM SNP 0027.scaffold00104 208912 1 T C scaffold25193 ScafM SNP 0027.scaffold00104 208922 1 G A scaffold25193 ScafM SNP 0027.scaffold00104 208932 1 C T scaffold25193 ScafM SNP 0027.scaffold00104 209011 1 A G scaffold25193 ScafM SNP 0027.scaffold00104 209026 1 G A scaffold25193 ScafM SNP 0027.scaffold00104 209045 1 A T scaffold25193 ScafM SNP 0027.scaffold00104 209080 1 A G scaffold25193 ScafM SNP 0027.scaffold00104 209085 2 AC GT scaffold25193 ScafM SNP 0027.scaffold00104 210257 1 A G scaffold6102 ReadM INDEL 0027.scaffold00104 221404 1 . A - ReadM INDEL 0027.scaffold00104 221410 1 . A - ScafM SNP 0027.scaffold00104 227293 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 228479 1 A T scaffold6102 ScafM SNP 0027.scaffold00104 228631 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 228869 1 A C scaffold6102 ScafM SNP 0027.scaffold00104 228977 1 A C scaffold6102 ScafM SNP 0027.scaffold00104 229144 1 T C scaffold6102 ScafM INDEL 0027.scaffold00104 229594 1 A . scaffold6102 ScafM SNP 0027.scaffold00104 229705 1 G A scaffold6102 ScafM SNP 0027.scaffold00104 230125 1 G C scaffold6102 ScafM SNP 0027.scaffold00104 230437 1 G A scaffold6102 ScafM SNP 0027.scaffold00104 230611 1 T A scaffold6102 ScafM SNP 0027.scaffold00104 230686 1 G C scaffold6102 ScafM SNP 0027.scaffold00104 230912 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 230959 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 231046 1 G A scaffold6102 ScafM SNP 0027.scaffold00104 231349 1 G A scaffold6102 ScafM SNP 0027.scaffold00104 231731 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 232176 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 234885 1 A G scaffold6102 ScafM SNP 0027.scaffold00104 235716 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 236148 1 A T scaffold6102 ScafM SNP 0027.scaffold00104 236678 1 C T scaffold6102 ScafM SNP 0027.scaffold00104 236911 1 G A scaffold6102 ScafM INDEL 0027.scaffold00104 236932 2 AA .. scaffold6102 ScafM SNP 0027.scaffold00104 236935 1 A G scaffold6102 ScafM SNP 0027.scaffold00104 238020 1 A G scaffold6102 ReadM SNP 0027.scaffold00104 239138 1 T G - ScafM SNP 0027.scaffold00104 257632 1 C A scaffold73846 ScafM INDEL 0027.scaffold00104 257709 1 . G scaffold73846 ScafM SNP 0027.scaffold00104 257718 1 G A scaffold73846 ScafM INDEL 0027.scaffold00104 257738 1 . A scaffold73846 Both INDEL 0027.scaffold00104 258344 1 . A scaffold73846 ScafM SNP 0027.scaffold00104 258712 1 T G scaffold73910 ScafM SNP 0027.scaffold00104 258719 1 C T scaffold73910 ScafM SNP 0027.scaffold00104 258727 1 T A scaffold73910 ScafM SNP 0027.scaffold00104 258765 1 G T scaffold73910 ScafM SNP 0027.scaffold00104 258776 1 A G scaffold73910 ScafM SNP 0027.scaffold00104 258778 1 G T scaffold73910 ScafM SNP 0027.scaffold00104 258801 1 A T scaffold73910 ScafM SNP 0027.scaffold00104 258898 1 G C scaffold73910 ScafM SNP 0027.scaffold00104 258942 1 C T scaffold73910 ScafM SNP 0027.scaffold00104 259015 1 G A scaffold73910 ScafM SNP 0027.scaffold00104 259119 1 C G scaffold73910 ScafM SNP 0027.scaffold00104 259235 1 C A scaffold73910 ScafM SNP 0027.scaffold00104 259470 1 G A scaffold73910 ScafM INDEL 0027.scaffold00104 279103 1 A . scaffold53384 ScafM INDEL 0027.scaffold00104 279106 1 A . scaffold53384 ScafM SNP 0027.scaffold00104 279123 1 A C scaffold53384 ScafM INDEL 0027.scaffold00104 279161 1 C . scaffold53384 ScafM INDEL 0027.scaffold00104 279163 1 . G scaffold53384 ScafM SNP 0027.scaffold00104 280513 1 T G scaffold53384 ScafM SNP 0027.scaffold00104 280578 1 C T scaffold53384 ScafM SNP 0027.scaffold00104 280658 1 T A scaffold53384 ScafM SNP 0027.scaffold00104 280663 1 C G scaffold53384 ScafM SNP 0027.scaffold00104 280726 1 A T scaffold53384 ScafM SNP 0027.scaffold00104 280844 1 C A scaffold53384 ScafM INDEL 0027.scaffold00104 280865 1 T . scaffold53384 ScafM SNP 0027.scaffold00104 281016 1 G A scaffold53384 ScafM SNP 0027.scaffold00104 281050 1 T G scaffold53384 ScafM SNP 0027.scaffold00104 281076 1 T A scaffold53384 ScafM SNP 0027.scaffold00104 281207 1 A C scaffold53384 ScafM SNP 0027.scaffold00104 281210 1 C A scaffold53384 ScafM SNP 0027.scaffold00104 281234 1 T G scaffold53384 ScafM SNP 0027.scaffold00104 281239 1 C G scaffold53384 ScafM SNP 0027.scaffold00104 283926 1 A C C19658961 ScafM SNP 0027.scaffold00104 283970 1 G T C19658961 ScafM SNP 0027.scaffold00104 284248 1 T C C19658961 ScafM SNP 0027.scaffold00104 284660 1 G A C19658961 ScafM SNP 0027.scaffold00104 287978 1 G C scaffold52202 ScafM SNP 0027.scaffold00104 288152 1 A T scaffold52202 ScafM SNP 0027.scaffold00104 288322 1 T A scaffold52202 ScafM SNP 0027.scaffold00104 288329 1 A G scaffold52202 ScafM SNP 0027.scaffold00104 288743 1 T A scaffold52202 ScafM SNP 0027.scaffold00104 292376 1 C G scaffold14312 ScafM SNP 0027.scaffold00104 292434 1 A T scaffold14312 ScafM SNP 0027.scaffold00104 299101 1 G A scaffold33920 ScafM SNP 0027.scaffold00104 299119 1 T C scaffold33920 ScafM SNP 0027.scaffold00104 299185 1 C T scaffold33920 ScafM SNP 0027.scaffold00104 300200 1 C T scaffold52202 ScafM SNP 0027.scaffold00104 300236 1 C T scaffold52202 ScafM SNP 0027.scaffold00104 300288 1 A G scaffold52202 ScafM SNP 0027.scaffold00104 300857 1 A G scaffold33920 ScafM SNP 0027.scaffold00104 302211 1 T G scaffold9778 ScafM INDEL 0027.scaffold00104 302222 6 TTTTTA ...... scaffold9778 ScafM SNP 0027.scaffold00104 302229 1 A T scaffold9778 ScafM SNP 0027.scaffold00104 302232 1 A G scaffold9778 ScafM SNP 0027.scaffold00104 302238 1 G A scaffold9778 ScafM SNP 0027.scaffold00104 302247 1 G A scaffold9778 ScafM SNP 0027.scaffold00104 302260 1 C T scaffold9778 ScafM SNP 0027.scaffold00104 302273 1 G A scaffold9778 ScafM SNP 0027.scaffold00104 302295 1 C A scaffold9778 ScafM SNP 0027.scaffold00104 302348 1 C T scaffold9778 ScafM SNP 0027.scaffold00104 302411 1 G A scaffold9778 ScafM SNP 0027.scaffold00104 302436 1 T A scaffold9778 ScafM SNP 0027.scaffold00104 302479 1 G A scaffold9778 ScafM SNP 0027.scaffold00104 306686 1 G T scaffold30767 ScafM SNP 0027.scaffold00104 306831 1 G A scaffold30767 ScafM INDEL 0027.scaffold00104 306901 23 ....................... CTCTCTTCCCCTTCCTTCCTCCT scaffold30767 ScafM SNP 0027.scaffold00104 306941 1 C A scaffold30767 ScafM SNP 0027.scaffold00104 306968 1 T C scaffold30767 ScafM SNP 0027.scaffold00104 307035 1 A G scaffold30767 ScafM SNP 0027.scaffold00104 307258 1 G A scaffold30767 ScafM SNP 0027.scaffold00104 307342 1 T A scaffold30767 ScafM INDEL 0027.scaffold00104 307413 6 ...... TTGTGT scaffold30767 ScafM SNP 0027.scaffold00104 307435 1 T A scaffold30767 ScafM SNP 0027.scaffold00104 307461 1 C T scaffold30767 ScafM SNP 0027.scaffold00104 307517 1 A G scaffold30767 ScafM SNP 0027.scaffold00104 307522 1 T G scaffold30767 ScafM SNP 0027.scaffold00104 307562 1 T G scaffold30767 ScafM SNP 0027.scaffold00104 307635 1 C T scaffold30767 ScafM INDEL 0027.scaffold00104 307729 13 AATTAGTTACTTG ............. scaffold30767 ScafM SNP 0027.scaffold00104 322163 1 A C scaffold53293 ScafM INDEL 0027.scaffold00104 322174 15 ATCAATGCGAGGCAA ............... scaffold53293 ScafM INDEL 0027.scaffold00104 322203 1 G . scaffold53293 ScafM INDEL 0027.scaffold00104 328093 1 . T scaffold10951 ReadM INDEL 0027.scaffold00104 330366 1 . A - ScafM SNP 0027.scaffold00104 346642 1 G C scaffold10951 ScafM INDEL 0027.scaffold00104 346692 1 A . scaffold10951 ScafM SNP 0027.scaffold00104 346754 1 C A scaffold10951 ScafM SNP 0027.scaffold00104 346867 1 C G scaffold10951 ScafM SNP 0027.scaffold00104 347281 1 T C scaffold10951 ScafM INDEL 0027.scaffold00104 347299 10 CTAAAGAGTT .......... scaffold10951 ScafM SNP 0027.scaffold00104 350411 1 C T scaffold10951 ScafM INDEL 0027.scaffold00104 350413 2 .. TA scaffold10951 ScafM INDEL 0027.scaffold00104 350421 1 . T scaffold10951 ScafM SNP 0027.scaffold00104 350425 1 A G scaffold10951 ScafM INDEL 0027.scaffold00104 351453 30 CGTCACCACCGACCTTCCTCTCTTTCTCAA .............................. scaffold10951 ScafM SNP 0027.scaffold00104 351598 1 A G scaffold10951 ScafM SNP 0027.scaffold00104 351616 1 C T scaffold10951 ScafM SNP 0027.scaffold00104 351696 1 A C scaffold10951 ScafM SNP 0027.scaffold00104 351726 1 T A scaffold10951 ScafM SNP 0027.scaffold00104 351745 1 C A scaffold10951 ScafM INDEL 0027.scaffold00104 351757 7 TTTTTCC ....... scaffold10951 ScafM SNP 0027.scaffold00104 351806 1 A T scaffold10951 ScafM INDEL 0027.scaffold00104 351859 3 ATA ... scaffold10951 ScafM INDEL 0027.scaffold00104 351866 3 GTT ... scaffold10951 ScafM SNP 0027.scaffold00104 351928 1 T C scaffold10951 ScafM SNP 0027.scaffold00104 351931 1 T C scaffold10951 ScafM SNP 0027.scaffold00104 352207 1 T C scaffold10951 ScafM SNP 0027.scaffold00104 352212 1 T G scaffold10951 ScafM SNP 0027.scaffold00104 352243 1 T C scaffold10951 ScafM SNP 0027.scaffold00104 352291 1 G T scaffold10951 ScafM SNP 0027.scaffold00104 352330 1 T A scaffold10951 ScafM SNP 0027.scaffold00104 352365 1 A T scaffold10951 ScafM INDEL 0027.scaffold00104 352445 8 ........ TAGTTGAA scaffold10951 ScafM SNP 0027.scaffold00104 352461 1 G T scaffold10951 ScafM SNP 0027.scaffold00104 352501 1 A T scaffold10951 ScafM SNP 0027.scaffold00104 352820 1 T C scaffold10951 ReadM SNP 0027.scaffold00104 355778 1 C T - ScafM SNP 0027.scaffold00104 357862 1 T C scaffold10951 ScafM INDEL 0027.scaffold00104 370788 1 G . scaffold38520 ScafM SNP 0027.scaffold00104 370798 1 A G scaffold38520 ScafM SNP 0027.scaffold00104 370981 1 A G scaffold38520 ScafM INDEL 0027.scaffold00104 371014 3 TTA ... scaffold38520 ScafM SNP 0027.scaffold00104 371070 1 A G scaffold38520 ScafM SNP 0027.scaffold00104 371073 1 C T scaffold38520 ScafM SNP 0027.scaffold00104 375745 1 C G scaffold36248 ScafM SNP 0027.scaffold00104 378725 1 G C scaffold54172 ScafM SNP 0027.scaffold00104 378774 1 T C scaffold54172 ScafM SNP 0027.scaffold00104 378833 1 A G scaffold54172 ScafM INDEL 0027.scaffold00104 378855 2 .. TT scaffold54172 ScafM SNP 0027.scaffold00104 378868 1 A C scaffold54172 ScafM SNP 0027.scaffold00104 378875 1 T C scaffold54172 ScafM SNP 0027.scaffold00104 378891 1 G C scaffold54172 ScafM SNP 0027.scaffold00104 378895 1 T C scaffold54172 ScafM INDEL 0027.scaffold00104 378900 2 .. AA scaffold54172 ScafM SNP 0027.scaffold00104 378904 1 T C scaffold54172 ScafM SNP 0027.scaffold00104 378927 1 T G scaffold54172 ScafM SNP 0027.scaffold00104 378984 1 G T scaffold54172 ScafM SNP 0027.scaffold00104 378991 1 G A scaffold54172 ScafM INDEL 0027.scaffold00104 380138 10 GGAAACAAGA .......... scaffold38521 ScafM SNP 0027.scaffold00104 381353 1 A T scaffold7206 ScafM SNP 0027.scaffold00104 381823 1 A C scaffold7206 ScafM SNP 0027.scaffold00104 382189 1 C G scaffold7206 ScafM INDEL 0027.scaffold00104 382274 1 . G scaffold7206 ScafM INDEL 0027.scaffold00104 382373 6 TTAAAG ...... scaffold7206 ScafM INDEL 0027.scaffold00104 382381 2 AA .. scaffold7206 ScafM INDEL 0027.scaffold00104 382385 3 CGC ... scaffold7206 ScafM SNP 0027.scaffold00104 382389 1 C T scaffold7206 ScafM SNP 0027.scaffold00104 382392 1 T C scaffold7206 ScafM SNP 0027.scaffold00104 382394 5 CTCTC AAAAA scaffold7206 ScafM SNP 0027.scaffold00104 382567 1 C T scaffold7206 ScafM SNP 0027.scaffold00104 382603 1 G A scaffold7206 ScafM SNP 0027.scaffold00104 383212 1 A G scaffold7206 ScafM SNP 0027.scaffold00104 383683 1 A C scaffold7206 ScafM SNP 0027.scaffold00104 385632 1 C G scaffold7206 ScafM SNP 0027.scaffold00104 385810 1 T C scaffold7206 ScafM SNP 0027.scaffold00104 385879 1 T C scaffold7206 ScafM INDEL 0027.scaffold00104 386052 3 ... CAT scaffold7206 ScafM SNP 0027.scaffold00104 386610 1 T G scaffold7206 ScafM SNP 0027.scaffold00104 386999 1 C T scaffold7206 ScafM INDEL 0027.scaffold00104 388059 2 .. AC scaffold7206 ScafM SNP 0027.scaffold00104 388065 1 C G scaffold7206 ScafM INDEL 0027.scaffold00104 388572 4 .... ATAT scaffold7206 ScafM SNP 0027.scaffold00104 388597 1 C G scaffold7206 ScafM SNP 0027.scaffold00104 388601 1 G A scaffold7206 ScafM SNP 0027.scaffold00104 388610 1 C G scaffold7206 ScafM SNP 0027.scaffold00104 388628 1 C T scaffold7206 ScafM INDEL 0027.scaffold00104 388646 44 TTTATTACGCACATTGATTATGTTTAATATCTAGGTTAATTTTT ............................................ scaffold7206 ScafM INDEL 0027.scaffold00104 388693 4 CCTC .... scaffold7206 ScafM SNP 0027.scaffold00104 389460 1 G A scaffold67873 ScafM INDEL 0027.scaffold00104 393837 2 AA .. scaffold2046 ScafM SNP 0027.scaffold00104 393843 1 A T scaffold2046 ScafM SNP 0027.scaffold00104 393861 1 G C scaffold2046 ScafM SNP 0027.scaffold00104 393867 1 A G scaffold2046 ScafM INDEL 0027.scaffold00104 394092 1 . A scaffold31015 ScafM SNP 0027.scaffold00104 394825 1 T C scaffold31015 ScafM SNP 0027.scaffold00104 394832 1 G A scaffold31015 ScafM INDEL 0027.scaffold00104 394891 2 .. TT scaffold31015 ScafM SNP 0027.scaffold00104 394901 1 T C scaffold31015 ScafM SNP 0027.scaffold00104 398430 1 T G scaffold3890 ScafM SNP 0027.scaffold00104 398461 1 A G scaffold3890 ScafM SNP 0027.scaffold00104 398463 1 G C scaffold3890 ScafM SNP 0027.scaffold00104 398467 1 C T scaffold3890 ScafM SNP 0027.scaffold00104 398532 1 C T scaffold3890 ScafM SNP 0027.scaffold00104 398571 1 G T scaffold3890 ScafM SNP 0027.scaffold00104 398944 1 G T scaffold25771 ScafM SNP 0027.scaffold00104 404579 1 T C scaffold53370 ScafM SNP 0027.scaffold00104 404935 1 A C scaffold53370 ScafM SNP 0027.scaffold00104 405450 1 A C scaffold19213 ScafM INDEL 0027.scaffold00104 406196 1 . A scaffold26349 ScafM SNP 0027.scaffold00104 407114 1 A G scaffold2522 ScafM SNP 0027.scaffold00104 407134 1 A G scaffold2522 ScafM INDEL 0027.scaffold00104 407151 1 . T scaffold2522 ScafM SNP 0027.scaffold00104 407157 1 T G scaffold2522 ScafM SNP 0027.scaffold00104 407159 1 C T scaffold2522 ScafM SNP 0027.scaffold00104 407174 1 A T scaffold2522 ScafM SNP 0027.scaffold00104 407177 1 T G scaffold2522 ScafM SNP 0027.scaffold00104 407184 1 T A scaffold2522 ScafM SNP 0027.scaffold00104 407196 2 GG AT scaffold2522 ScafM SNP 0027.scaffold00104 407217 1 C A scaffold2522 ScafM SNP 0027.scaffold00104 407278 1 A T scaffold2522 ScafM SNP 0027.scaffold00104 407285 1 A G scaffold2522 ScafM SNP 0027.scaffold00104 407287 1 A T scaffold2522 ScafM SNP 0027.scaffold00104 407294 1 C T scaffold2522 ScafM SNP 0027.scaffold00104 407308 1 A C scaffold2522 ScafM SNP 0027.scaffold00104 407311 1 C T scaffold2522 ScafM SNP 0027.scaffold00104 407318 1 T C scaffold2522 ScafM SNP 0027.scaffold00104 407324 1 A T scaffold2522 ScafM SNP 0027.scaffold00104 407327 1 T G scaffold2522 ScafM SNP 0027.scaffold00104 407351 1 G C scaffold2522 ScafM SNP 0027.scaffold00104 407355 1 A C scaffold2522 ScafM SNP 0027.scaffold00104 407360 1 T G scaffold2522 ScafM SNP 0027.scaffold00104 407374 1 C T scaffold2522 ScafM SNP 0027.scaffold00104 407421 1 A G scaffold23465 ScafM SNP 0027.scaffold00104 407431 1 G A scaffold23465 ScafM SNP 0027.scaffold00104 407443 1 A C scaffold23465 ScafM INDEL 0027.scaffold00104 407481 3 .AA TTT scaffold23465 ScafM SNP 0027.scaffold00104 407492 1 C G scaffold23465 ScafM SNP 0027.scaffold00104 407509 1 T C scaffold23465 ScafM SNP 0027.scaffold00104 407546 1 A C scaffold23465 ScafM SNP 0027.scaffold00104 407552 1 A C scaffold23465 ScafM SNP 0027.scaffold00104 407554 1 T C scaffold23465 ScafM SNP 0027.scaffold00104 407593 1 G C scaffold23465 ScafM INDEL 0027.scaffold00104 407601 11 TACAACTAAAC ........... scaffold23465 ScafM SNP 0027.scaffold00104 407624 2 GC AT scaffold23465 ScafM SNP 0027.scaffold00104 407630 2 TC CA scaffold23465 ScafM SNP 0027.scaffold00104 407649 1 C T scaffold23465 ScafM SNP 0027.scaffold00104 407692 1 T C scaffold23465 ScafM SNP 0027.scaffold00104 407695 2 GA CG scaffold23465 ScafM SNP 0027.scaffold00104 407716 1 G C scaffold23465 ScafM SNP 0027.scaffold00104 407728 1 G C scaffold23465 ScafM SNP 0027.scaffold00104 407818 1 A G scaffold23465 ScafM SNP 0027.scaffold00104 407964 1 G A scaffold23465 ScafM SNP 0027.scaffold00104 408010 1 C A scaffold23465 ScafM SNP 0027.scaffold00104 408025 1 T A scaffold23465 ScafM SNP 0027.scaffold00104 408047 1 G A scaffold23465 ScafM SNP 0027.scaffold00104 408105 1 G A scaffold23465 ScafM SNP 0027.scaffold00104 408110 1 G T scaffold23465 ScafM SNP 0027.scaffold00104 408120 2 AA TG scaffold23465 ScafM SNP 0027.scaffold00104 408170 1 C G scaffold23465 ScafM INDEL 0027.scaffold00104 408197 1 . T scaffold23465 ScafM SNP 0027.scaffold00104 408208 1 C T scaffold23465 ScafM SNP 0027.scaffold00104 408211 2 TG AC scaffold23465 ScafM SNP 0027.scaffold00104 408222 1 A G scaffold23465 ScafM INDEL 0027.scaffold00104 408558 1 A . scaffold33664 ScafM SNP 0027.scaffold00104 408691 1 A G scaffold33664 ScafM INDEL 0027.scaffold00104 410244 4 ATTA .... scaffold16112 ScafM SNP 0027.scaffold00104 429802 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 429843 1 A C scaffold54847 ScafM SNP 0027.scaffold00104 429848 1 A C scaffold54847 ScafM SNP 0027.scaffold00104 430006 1 A G scaffold54847 ScafM INDEL 0027.scaffold00104 430148 1 . C scaffold54847 ScafM SNP 0027.scaffold00104 430210 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 430214 1 C A scaffold54847 ScafM SNP 0027.scaffold00104 430243 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 430321 2 TC AA scaffold54847 ScafM INDEL 0027.scaffold00104 430358 3 AAA ... scaffold54847 ScafM INDEL 0027.scaffold00104 430411 1 . A scaffold54847 ScafM INDEL 0027.scaffold00104 430492 3 ... TAG scaffold54847 ScafM INDEL 0027.scaffold00104 430555 3 ACA ... scaffold54847 ScafM INDEL 0027.scaffold00104 430756 2 TG .. scaffold54847 ScafM SNP 0027.scaffold00104 430790 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 430804 1 C G scaffold54847 ScafM SNP 0027.scaffold00104 430863 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 430924 1 A T scaffold54847 ScafM SNP 0027.scaffold00104 430934 1 G C scaffold54847 ScafM SNP 0027.scaffold00104 430951 1 G A scaffold54847 ScafM SNP 0027.scaffold00104 430994 1 G A scaffold54847 ScafM SNP 0027.scaffold00104 431176 1 A G scaffold54847 ScafM SNP 0027.scaffold00104 431178 3 AAA GGT scaffold54847 ScafM INDEL 0027.scaffold00104 431184 3 TCG ... scaffold54847 ScafM INDEL 0027.scaffold00104 431188 1 G . scaffold54847 ScafM SNP 0027.scaffold00104 431190 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 431229 1 C T scaffold54847 ScafM SNP 0027.scaffold00104 431248 1 A G scaffold54847 ScafM SNP 0027.scaffold00104 431326 1 C T scaffold54847 ScafM INDEL 0027.scaffold00104 431365 4 .... AAAA scaffold54847 ScafM SNP 0027.scaffold00104 431587 1 G A scaffold54847 ScafM SNP 0027.scaffold00104 431868 1 G C scaffold54847 ScafM INDEL 0027.scaffold00104 431922 1 T . scaffold54847 ScafM SNP 0027.scaffold00104 431966 1 A C scaffold54847 ScafM SNP 0027.scaffold00104 432100 1 G A scaffold54847 ScafM SNP 0027.scaffold00104 432105 1 A G scaffold54847 ScafM INDEL 0027.scaffold00104 433763 10 ATCGCTGTAG .......... scaffold71767 ScafM SNP 0027.scaffold00104 436095 1 T C scaffold63998 ScafM SNP 0027.scaffold00104 436181 1 G A scaffold63998 ScafM SNP 0027.scaffold00104 436204 1 T C scaffold63998 ScafM SNP 0027.scaffold00104 437095 1 C A scaffold41494 ScafM INDEL 0027.scaffold00104 437335 9 ......... ACTAAGTAT scaffold41494 ScafM SNP 0027.scaffold00104 437363 1 A C scaffold41494 ScafM SNP 0027.scaffold00104 437378 1 A C scaffold41494 ScafM SNP 0027.scaffold00104 437380 1 G T scaffold41494 ScafM SNP 0027.scaffold00104 441930 1 A G scaffold41494 ScafM SNP 0027.scaffold00104 443747 1 A T scaffold51848 ScafM INDEL 0027.scaffold00104 443775 8 CGGGGGGG ........ scaffold51848 ScafM INDEL 0027.scaffold00104 443790 6 CGGGGA ...... scaffold51848 ScafM SNP 0027.scaffold00104 444395 1 G T scaffold41494 ScafM SNP 0027.scaffold00104 444422 1 T C scaffold41494 ScafM SNP 0027.scaffold00104 444480 1 G A scaffold41494 ScafM INDEL 0027.scaffold00104 444508 4 ACAT .... scaffold41494 ScafM SNP 0027.scaffold00104 444517 1 C A scaffold41494 ScafM SNP 0027.scaffold00104 444542 1 C G scaffold41494 ScafM INDEL 0027.scaffold00104 444587 3 TTC ... scaffold41494 ScafM SNP 0027.scaffold00104 448293 1 C T scaffold24666 ScafM SNP 0027.scaffold00104 448296 1 C G scaffold24666 ScafM SNP 0027.scaffold00104 448304 1 C T scaffold24666 ScafM SNP 0027.scaffold00104 448314 1 G C scaffold24666 ScafM SNP 0027.scaffold00104 448320 1 C G scaffold24666 ScafM SNP 0027.scaffold00104 448341 1 C T scaffold24666 ScafM SNP 0027.scaffold00104 448368 1 A G scaffold24666 ScafM SNP 0027.scaffold00104 448375 1 T A scaffold24666 ScafM INDEL 0027.scaffold00104 448387 3 ... ACA scaffold24666 ScafM SNP 0027.scaffold00104 448409 1 A G scaffold24666 ScafM SNP 0027.scaffold00104 448429 1 G A scaffold24666 ScafM SNP 0027.scaffold00104 448466 1 G A scaffold24666 ScafM SNP 0027.scaffold00104 448481 1 T A scaffold24666 ScafM SNP 0027.scaffold00104 448485 1 C A scaffold24666 ScafM SNP 0027.scaffold00104 448487 1 G C scaffold24666 ScafM SNP 0027.scaffold00104 448522 2 GA CC scaffold24666 ScafM SNP 0027.scaffold00104 448525 1 A C scaffold24666 ScafM SNP 0027.scaffold00104 448530 1 A T scaffold24666 ScafM SNP 0027.scaffold00104 448532 1 T C scaffold24666 ScafM SNP 0027.scaffold00104 448535 1 T C scaffold24666 ScafM SNP 0027.scaffold00104 448546 1 C T scaffold24666 ScafM SNP 0027.scaffold00104 448565 1 T C scaffold24666 ScafM INDEL 0027.scaffold00104 467600 2 TA .. scaffold5656 ScafM SNP 0027.scaffold00104 469741 1 G C scaffold5656 ScafM INDEL 0027.scaffold00104 469771 37 TCCTGATCAGTTCTACCTCAATTATAGGTGGAAGCCT ..................................... scaffold5656 ScafM INDEL 0027.scaffold00104 473015 3 AAA ... scaffold5656 ScafM SNP 0027.scaffold00104 473025 1 A T scaffold5656 ScafM INDEL 0027.scaffold00104 473093 23 ....................... ACAATGTAAAGATGGGAGAGTTT scaffold5656 ScafM SNP 0027.scaffold00104 473304 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473328 1 A T scaffold5656 ScafM SNP 0027.scaffold00104 473392 1 A G scaffold5656 ScafM SNP 0027.scaffold00104 473410 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473457 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473467 2 GA AG scaffold5656 ScafM SNP 0027.scaffold00104 473474 1 T A scaffold5656 ScafM SNP 0027.scaffold00104 473482 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473490 1 T A scaffold5656 ScafM SNP 0027.scaffold00104 473512 1 T C scaffold5656 ScafM SNP 0027.scaffold00104 473516 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473541 1 G A scaffold5656 ScafM SNP 0027.scaffold00104 473595 1 T C scaffold5656 ScafM SNP 0027.scaffold00104 473747 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473781 1 C T scaffold5656 ScafM SNP 0027.scaffold00104 473840 1 A G scaffold5656 ScafM SNP 0027.scaffold00104 473851 1 A T scaffold5656 ScafM SNP 0027.scaffold00104 473904 1 G A scaffold5656 ScafM SNP 0027.scaffold00104 474038 1 G C scaffold5656 ScafM SNP 0027.scaffold00104 474067 1 T G scaffold5656 ScafM SNP 0027.scaffold00104 474131 1 T G scaffold5656 ScafM SNP 0027.scaffold00104 474139 2 GC TT scaffold5656 ScafM SNP 0027.scaffold00104 474146 1 A G scaffold5656 ScafM SNP 0027.scaffold00104 474154 1 A T scaffold5656 ScafM SNP 0027.scaffold00104 474162 1 A G scaffold5656 ScafM SNP 0027.scaffold00104 474185 1 T C scaffold5656 ScafM SNP 0027.scaffold00104 474192 1 T C scaffold5656 ScafM INDEL 0027.scaffold00104 474238 2 .. TA scaffold5656 ScafM SNP 0027.scaffold00104 474286 1 C T scaffold5656 ScafM INDEL 0027.scaffold00104 476500 1 . T scaffold5656 ReadM SNP 0027.scaffold00104 485650 1 C T - ScafM SNP 0027.scaffold00104 492187 1 G A scaffold9666 ScafM INDEL 0027.scaffold00104 492188 1 . G scaffold9666 ScafM INDEL 0027.scaffold00104 492192 1 C . scaffold9666 ScafM SNP 0027.scaffold00104 492229 1 G A scaffold9666 ScafM SNP 0027.scaffold00104 492255 1 T C scaffold9666 ScafM INDEL 0027.scaffold00104 493384 1 A . scaffold12200 ScafM SNP 0027.scaffold00104 493386 1 A T scaffold12200 ScafM SNP 0027.scaffold00104 496692 1 G A scaffold4450 ScafM SNP 0027.scaffold00104 496769 1 C A scaffold4450 ScafM SNP 0027.scaffold00104 496790 1 C T scaffold4450 ScafM INDEL 0027.scaffold00104 496811 1 . T scaffold4450 ScafM SNP 0027.scaffold00104 513291 1 C G scaffold13012 ScafM INDEL 0027.scaffold00104 513299 1 . G scaffold13012 ScafM SNP 0027.scaffold00104 513350 1 A G scaffold13012 ScafM SNP 0027.scaffold00104 513355 1 C T scaffold13012 ScafM INDEL 0027.scaffold00104 513410 14 GAGGATTTGGACAA .............. scaffold13012 Both SNP 0027.scaffold00104 522483 1 T A scaffold9446 ReadM SNP 0027.scaffold00104 523401 1 C G - ScafM SNP 0027.scaffold00104 535127 1 T C C19761487 ScafM SNP 0027.scaffold00104 535133 1 A T C19761487 ScafM SNP 0027.scaffold00104 535453 1 A G C19761487 ScafM SNP 0027.scaffold00104 535688 1 C G C19761487 Both INDEL 0027.scaffold00104 545219 1 . A scaffold23182 ScafM SNP 0027.scaffold00104 562923 1 T C scaffold52834 ScafM INDEL 0027.scaffold00104 563889 2 .. TT scaffold52834 ScafM INDEL 0027.scaffold00104 564377 6 ...... AAAACA scaffold52834 ScafM SNP 0027.scaffold00104 566060 1 A G scaffold40724 ScafM SNP 0027.scaffold00104 566229 1 A T scaffold40724 ScafM SNP 0027.scaffold00104 566751 1 C A scaffold40724 ScafM SNP 0027.scaffold00104 573373 1 A G scaffold6047 ScafM SNP 0027.scaffold00104 573381 1 A C scaffold6047 ScafM SNP 0027.scaffold00104 573394 1 G A scaffold6047 ScafM SNP 0027.scaffold00104 573401 1 G T scaffold6047 ScafM SNP 0027.scaffold00104 573422 1 A C scaffold6047 ScafM SNP 0027.scaffold00104 573452 1 C T scaffold6047 ScafM SNP 0027.scaffold00104 573460 1 T C scaffold6047 ScafM SNP 0027.scaffold00104 573514 1 T C scaffold6047 ScafM SNP 0027.scaffold00104 573558 1 A G scaffold6047 ScafM SNP 0027.scaffold00104 573589 1 T C scaffold6047 ScafM SNP 0027.scaffold00104 573601 1 G T scaffold6047 ScafM SNP 0027.scaffold00104 573610 2 TG AA scaffold6047 ScafM SNP 0027.scaffold00104 573617 1 A G scaffold6047 ScafM SNP 0027.scaffold00104 575062 1 G A scaffold27633 ScafM SNP 0027.scaffold00104 575077 1 T G scaffold27633 ScafM SNP 0027.scaffold00104 575171 1 T A scaffold27633 ScafM INDEL 0027.scaffold00104 575231 22 ...................... CGACCTCTACCTCCTCGTCCTC scaffold27633 ScafM INDEL 0027.scaffold00104 575487 1 T . scaffold27633 ScafM SNP 0027.scaffold00104 575554 1 T C scaffold27633 ScafM SNP 0027.scaffold00104 575562 1 A G scaffold27633 ScafM INDEL 0027.scaffold00104 575724 10 .......... TAGCATAGAT scaffold27633 ScafM SNP 0027.scaffold00104 575863 1 A G scaffold27633 ScafM SNP 0027.scaffold00104 575935 1 A G scaffold27633 ScafM SNP 0027.scaffold00104 576017 1 T G scaffold27633 ScafM SNP 0027.scaffold00104 576042 1 C T scaffold27633 ScafM SNP 0027.scaffold00104 576051 1 C T scaffold27633 ScafM SNP 0027.scaffold00104 576085 1 T C scaffold27633 ScafM SNP 0027.scaffold00104 582255 1 T C scaffold10820 ScafM SNP 0027.scaffold00104 582322 1 A T scaffold10820 ScafM SNP 0027.scaffold00104 582710 2 CA GG scaffold10820 ScafM SNP 0027.scaffold00104 582854 1 T C scaffold10820 ScafM SNP 0027.scaffold00104 582913 1 G C scaffold10820 ScafM SNP 0027.scaffold00104 582919 1 C T scaffold10820 ScafM INDEL 0027.scaffold00104 582959 1 . A scaffold10820 ScafM SNP 0027.scaffold00104 582986 1 T A scaffold10820 ScafM SNP 0027.scaffold00104 583005 1 G T scaffold10820 ScafM SNP 0027.scaffold00104 583240 1 T G scaffold10820 ScafM SNP 0027.scaffold00104 583378 1 G C scaffold10820 ScafM SNP 0027.scaffold00104 583405 1 A G scaffold10820 ScafM SNP 0027.scaffold00104 583413 1 A T scaffold10820 ScafM SNP 0027.scaffold00104 583422 1 G T scaffold10820 ScafM SNP 0027.scaffold00104 583782 1 A G scaffold10820 ScafM SNP 0027.scaffold00104 583820 1 A G scaffold10820 ScafM SNP 0027.scaffold00104 584128 1 T A scaffold10820 ScafM SNP 0027.scaffold00104 584182 1 A G scaffold10820 ScafM INDEL 0027.scaffold00104 599034 1 C . scaffold36147 ScafM SNP 0027.scaffold00104 599049 2 GG AT scaffold36147 ScafM SNP 0027.scaffold00104 599055 1 G C scaffold36147 ScafM SNP 0027.scaffold00104 600933 1 T C scaffold36147 ScafM INDEL 0027.scaffold00104 600959 1 . A scaffold36147 ScafM INDEL 0027.scaffold00104 601010 1 A . scaffold36147 ScafM SNP 0027.scaffold00104 601012 1 A G scaffold36147 ScafM SNP 0027.scaffold00104 601054 1 C G scaffold36147 ScafM SNP 0027.scaffold00104 601056 1 G A scaffold36147 ScafM SNP 0027.scaffold00104 601083 1 A T scaffold36147 ScafM INDEL 0027.scaffold00104 601093 3 ... AAG scaffold36147 ScafM SNP 0027.scaffold00104 601160 1 A G scaffold36147 ScafM SNP 0027.scaffold00104 601170 1 C G scaffold36147 ScafM INDEL 0027.scaffold00104 601180 41 GTTGTGCGTTATTATAAGTGTCGTAGACGCTTATTTATTTA ......................................... scaffold36147 ScafM SNP 0027.scaffold00104 605363 1 A G scaffold1247 ScafM SNP 0027.scaffold00104 605415 2 TT GG scaffold1247 ScafM SNP 0027.scaffold00104 636898 1 T G scaffold16466 ScafM INDEL 0027.scaffold00104 636911 1 . T scaffold16466 ScafM SNP 0027.scaffold00104 636922 1 A T scaffold16466 ScafM SNP 0027.scaffold00104 636927 4 AAAT CCGC scaffold16466 ScafM SNP 0027.scaffold00104 636932 1 C G scaffold16466 ScafM SNP 0027.scaffold00104 636934 1 A G scaffold16466 ScafM SNP 0027.scaffold00104 636936 1 A C scaffold16466 ScafM INDEL 0027.scaffold00104 636938 2 TC .. scaffold16466 ScafM INDEL 0027.scaffold00104 636965 7 ....... ACTAGCG scaffold16466 ScafM SNP 0027.scaffold00104 636973 1 C T scaffold16466 ScafM SNP 0027.scaffold00104 636991 1 T C scaffold16466 ScafM SNP 0027.scaffold00104 636995 1 C T scaffold16466 ScafM SNP 0027.scaffold00104 637008 1 T C scaffold16466 ScafM SNP 0027.scaffold00104 637030 1 C T scaffold16466 ScafM SNP 0027.scaffold00104 637064 1 T C scaffold16466 ScafM INDEL 0027.scaffold00104 637068 1 . A scaffold16466 ScafM SNP 0027.scaffold00104 637072 1 A G scaffold16466 ScafM SNP 0027.scaffold00104 637076 1 T G scaffold16466 ScafM SNP 0027.scaffold00104 637086 1 G A scaffold16466 ScafM SNP 0027.scaffold00104 640235 1 A G scaffold18992 ScafM SNP 0027.scaffold00104 640267 1 C T scaffold18992 ScafM SNP 0027.scaffold00104 640281 1 T G scaffold18992 ScafM SNP 0027.scaffold00104 640363 1 A T scaffold18992 ScafM SNP 0027.scaffold00104 640460 1 T C scaffold18992 ScafM SNP 0027.scaffold00104 640572 1 A G scaffold18992 ScafM SNP 0027.scaffold00104 645144 1 G A C19670565 ScafM SNP 0027.scaffold00104 645726 1 C G C19670565 ScafM SNP 0027.scaffold00104 646396 1 A G scaffold72614 ScafM INDEL 0027.scaffold00104 648195 11 CATATATTCTC ........... scaffold23129 ScafM SNP 0027.scaffold00104 648214 1 A G scaffold23129 ScafM SNP 0027.scaffold00104 648221 1 T G scaffold23129 ScafM SNP 0027.scaffold00104 648262 1 C T scaffold23129 ScafM SNP 0027.scaffold00104 648279 1 C T scaffold23129 ScafM SNP 0027.scaffold00104 648299 1 G A scaffold23129 ScafM INDEL 0027.scaffold00104 648997 3 TTT ... scaffold32503 ScafM INDEL 0027.scaffold00104 650959 8 ........ TTATTTTT scaffold33812 ScafM SNP 0027.scaffold00104 651796 1 G C C19727529 ScafM SNP 0027.scaffold00104 651959 1 A G C19727529 ScafM SNP 0027.scaffold00104 652378 1 G C C19727529 ScafM SNP 0027.scaffold00104 652802 1 T A C19727529 ScafM SNP 0027.scaffold00104 653049 1 T G C19727529 ScafM SNP 0027.scaffold00104 653297 1 G T scaffold13149 ScafM SNP 0027.scaffold00104 653721 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 654359 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 655094 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 655675 1 G C scaffold13149 ScafM SNP 0027.scaffold00104 656102 1 T A scaffold13149 ScafM INDEL 0027.scaffold00104 657026 1 A . scaffold13149 ScafM INDEL 0027.scaffold00104 657191 1 T . scaffold13149 ScafM SNP 0027.scaffold00104 657238 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 658180 1 T A scaffold13149 ScafM SNP 0027.scaffold00104 658359 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 658791 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 659016 1 T C scaffold13149 ScafM SNP 0027.scaffold00104 659163 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 659639 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 660595 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 660615 1 C A scaffold13149 ScafM SNP 0027.scaffold00104 660880 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 660915 1 A T scaffold13149 ScafM INDEL 0027.scaffold00104 661533 1 . A scaffold13149 ScafM SNP 0027.scaffold00104 661535 2 TT AA scaffold13149 ScafM INDEL 0027.scaffold00104 661687 2 .. AA scaffold13149 ScafM SNP 0027.scaffold00104 662253 1 T G scaffold13149 ScafM INDEL 0027.scaffold00104 662729 1 C . scaffold13149 ScafM INDEL 0027.scaffold00104 663278 1 . T scaffold13149 ScafM SNP 0027.scaffold00104 663336 1 A C scaffold13149 ScafM INDEL 0027.scaffold00104 663426 1 T . scaffold13149 ScafM SNP 0027.scaffold00104 663536 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 663632 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 664092 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 664167 1 G T scaffold13149 ScafM SNP 0027.scaffold00104 664524 1 T G scaffold13149 ScafM SNP 0027.scaffold00104 664689 1 G C scaffold13149 ScafM SNP 0027.scaffold00104 668984 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 669213 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 669652 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 669677 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 669757 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 670005 1 T G scaffold13149 ScafM SNP 0027.scaffold00104 670350 1 C A scaffold13149 ScafM SNP 0027.scaffold00104 670402 1 A G scaffold13149 ScafM INDEL 0027.scaffold00104 670501 2 AA .T scaffold13149 ScafM SNP 0027.scaffold00104 670569 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 670937 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 670976 1 G A scaffold13149 ScafM INDEL 0027.scaffold00104 672316 1 T . scaffold13149 ScafM INDEL 0027.scaffold00104 672326 3 ... TAT scaffold13149 ScafM SNP 0027.scaffold00104 672909 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 672976 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 673758 1 C T scaffold13149 ScafM INDEL 0027.scaffold00104 673762 1 . C scaffold13149 ScafM SNP 0027.scaffold00104 673769 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 673803 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 673822 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 673829 1 A G scaffold13149 ScafM INDEL 0027.scaffold00104 673853 2 AT .. scaffold13149 ScafM SNP 0027.scaffold00104 673861 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 673917 1 T C scaffold13149 ScafM SNP 0027.scaffold00104 673940 1 G A scaffold13149 ScafM INDEL 0027.scaffold00104 673947 4 .... AAAT scaffold13149 ScafM INDEL 0027.scaffold00104 673996 3 GCA ... scaffold13149 ScafM SNP 0027.scaffold00104 674001 1 T G scaffold13149 ScafM INDEL 0027.scaffold00104 674003 9 ATTTTTTTT ......... scaffold13149 ScafM SNP 0027.scaffold00104 674072 1 C T scaffold13149 ScafM SNP 0027.scaffold00104 674385 1 G A scaffold13149 ScafM SNP 0027.scaffold00104 677113 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 677116 2 AA TT scaffold13149 ScafM SNP 0027.scaffold00104 677274 1 G A scaffold13149 ScafM INDEL 0027.scaffold00104 677520 17 ................. GACGATAGACATTCACC scaffold13149 ScafM SNP 0027.scaffold00104 677639 1 C G scaffold13149 ScafM SNP 0027.scaffold00104 677764 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 678014 1 A G scaffold13149 ScafM SNP 0027.scaffold00104 682157 1 A T scaffold13149 ScafM SNP 0027.scaffold00104 683841 1 A C C19673781 ReadM INDEL 0027.scaffold00104 688372 1 C . - ScafM SNP 0027.scaffold00104 696926 1 T G scaffold7912 ScafM SNP 0027.scaffold00104 697008 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 697273 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 698157 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 698181 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 698186 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 698195 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 698226 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 698315 1 G T scaffold7912 ScafM SNP 0027.scaffold00104 698380 1 A T scaffold7912 ScafM SNP 0027.scaffold00104 698388 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 698420 1 T C scaffold7912 ScafM INDEL 0027.scaffold00104 699251 42 .......................................... ATGTCCCTCTATGCATTCACTGCAAAATATTAGTTTTATCTC scaffold30890 ScafM SNP 0027.scaffold00104 699302 1 A C scaffold30890 ScafM SNP 0027.scaffold00104 699362 1 A C scaffold30890 ScafM SNP 0027.scaffold00104 699803 1 G A scaffold30890 ScafM SNP 0027.scaffold00104 699869 2 GA AC scaffold30890 ScafM INDEL 0027.scaffold00104 699873 2 TT .. scaffold30890 ScafM INDEL 0027.scaffold00104 699876 1 T . scaffold30890 ScafM SNP 0027.scaffold00104 699878 1 A C scaffold30890 ScafM INDEL 0027.scaffold00104 699881 2 AT .C scaffold30890 ScafM SNP 0027.scaffold00104 699885 4 TTTT AAAA scaffold30890 ScafM INDEL 0027.scaffold00104 699890 1 T . scaffold30890 ScafM INDEL 0027.scaffold00104 699892 1 G . scaffold30890 ScafM INDEL 0027.scaffold00104 699895 5 TTTAA ....G scaffold30890 ScafM INDEL 0027.scaffold00104 699901 1 G . scaffold30890 ScafM SNP 0027.scaffold00104 699909 1 C G scaffold30890 ScafM SNP 0027.scaffold00104 699934 1 C G scaffold30890 ScafM SNP 0027.scaffold00104 701772 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 701872 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 701899 1 G T scaffold7912 ScafM SNP 0027.scaffold00104 701989 1 A C scaffold7912 ScafM SNP 0027.scaffold00104 702129 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 703108 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 705987 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 706373 1 G C scaffold7912 ScafM SNP 0027.scaffold00104 708081 1 G T scaffold7912 ScafM SNP 0027.scaffold00104 708523 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 709117 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 709198 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 709718 1 A T scaffold7912 ScafM SNP 0027.scaffold00104 709966 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 709984 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 710593 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 710748 2 TT AC scaffold7912 ScafM SNP 0027.scaffold00104 710849 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 711504 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 712073 1 G A scaffold7912 ScafM INDEL 0027.scaffold00104 712624 67 ................................................................... TGTAAAGGGAACAAGAAATCCAAAGTGTCATTGCTGATATTTCCACCCAGCACTTTTACCATGTCAT scaffold7912 ScafM INDEL 0027.scaffold00104 712706 2 .. TT scaffold7912 ScafM SNP 0027.scaffold00104 713037 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 713107 1 A C scaffold7912 ScafM SNP 0027.scaffold00104 713618 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 714152 1 C T scaffold7912 ScafM SNP 0027.scaffold00104 714213 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 714309 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 714382 1 A T scaffold7912 ScafM SNP 0027.scaffold00104 714697 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 715229 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 715494 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 716007 1 A C scaffold7912 ScafM INDEL 0027.scaffold00104 716477 2 AC .. scaffold7912 ScafM INDEL 0027.scaffold00104 716482 28 TTATCCCCATTTTGTTCTGTACTTTTTT ............................ scaffold7912 ScafM SNP 0027.scaffold00104 716522 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 716571 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 716652 1 T C scaffold7912 ScafM SNP 0027.scaffold00104 717045 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 717066 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 717260 1 T G scaffold7912 ScafM INDEL 0027.scaffold00104 717479 22 ...................... TGAATTTTTTCTAAACAATTTT scaffold7912 ScafM SNP 0027.scaffold00104 717611 1 G T scaffold7912 ScafM SNP 0027.scaffold00104 717854 1 G A scaffold7912 ScafM INDEL 0027.scaffold00104 718292 2 TT .. scaffold7912 ScafM SNP 0027.scaffold00104 718538 1 T C scaffold7912 ScafM INDEL 0027.scaffold00104 718681 3 ... ATA scaffold7912 ScafM INDEL 0027.scaffold00104 718714 80 ................................................................................ TATTCGTAGACTCGTTCCATAAAAGAAACCAACAATATCTAATTGCAAGTTTAAATGGGCGATTTTTTAGCCATATTCTT scaffold7912 ScafM INDEL 0027.scaffold00104 718715 4 .... AAAT scaffold7912 ScafM SNP 0027.scaffold00104 719048 1 C G scaffold7912 ScafM INDEL 0027.scaffold00104 719986 11 TATTTAGATTT ........... scaffold7912 ScafM INDEL 0027.scaffold00104 720001 7 CACTGGA ....... scaffold7912 ScafM SNP 0027.scaffold00104 720404 1 G A scaffold7912 ScafM INDEL 0027.scaffold00104 720634 2 .. TG scaffold7912 ScafM SNP 0027.scaffold00104 721170 1 T G scaffold7912 ScafM SNP 0027.scaffold00104 721210 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 721270 1 G T scaffold7912 ScafM INDEL 0027.scaffold00104 721467 23 TGTTCACCCAACATGCTTTACAG ....................... scaffold7912 ScafM SNP 0027.scaffold00104 721497 1 G A scaffold7912 ScafM SNP 0027.scaffold00104 721500 1 G A scaffold7912 ScafM INDEL 0027.scaffold00104 721505 2 GG .. scaffold7912 ScafM SNP 0027.scaffold00104 721599 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 722218 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 723023 1 G T scaffold7912 ScafM SNP 0027.scaffold00104 723188 1 A T scaffold7912 ScafM INDEL 0027.scaffold00104 723664 1 . G scaffold7912 ScafM SNP 0027.scaffold00104 723880 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 724100 1 G A scaffold7912 ScafM INDEL 0027.scaffold00104 724156 3 GAT ... scaffold7912 ScafM INDEL 0027.scaffold00104 724164 17 GAGAAAATGGAGGAAAG ................. scaffold7912 ScafM SNP 0027.scaffold00104 724317 1 A G scaffold7912 ScafM SNP 0027.scaffold00104 724404 1 C G scaffold7912 ScafM SNP 0027.scaffold00104 724442 1 T A scaffold7912 ScafM SNP 0027.scaffold00104 724492 1 G C scaffold7912 ScafM INDEL 0027.scaffold00104 728559 1 . T scaffold7263 ReadM SNP 0027.scaffold00104 746254 1 T C - ScafM SNP 0027.scaffold00104 747041 1 T C scaffold14694 ScafM SNP 0027.scaffold00104 747167 1 C T scaffold14694 ScafM SNP 0027.scaffold00104 747176 1 C T scaffold14694 ScafM SNP 0027.scaffold00104 747268 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 747275 1 G C scaffold14694 ScafM SNP 0027.scaffold00104 747280 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 747335 1 T C scaffold14694 ScafM SNP 0027.scaffold00104 747339 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 747361 1 C T scaffold14694 ScafM SNP 0027.scaffold00104 747385 1 T C scaffold14694 ScafM SNP 0027.scaffold00104 747394 1 G A scaffold14694 ScafM SNP 0027.scaffold00104 747398 1 T C scaffold14694 ScafM SNP 0027.scaffold00104 747410 1 C T scaffold14694 ScafM SNP 0027.scaffold00104 747421 1 C T scaffold14694 ScafM SNP 0027.scaffold00104 747423 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 747446 1 A C scaffold14694 ScafM SNP 0027.scaffold00104 747450 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 747539 1 A G scaffold14694 ScafM SNP 0027.scaffold00104 748506 1 C A scaffold27287 ScafM SNP 0027.scaffold00104 750653 1 T C scaffold13800 ScafM SNP 0027.scaffold00104 750661 1 G A scaffold13800 ScafM INDEL 0027.scaffold00104 750665 2 .. TT scaffold13800 ScafM SNP 0027.scaffold00104 750668 1 C T scaffold13800 ScafM SNP 0027.scaffold00104 750965 1 C G scaffold13800 ScafM SNP 0027.scaffold00104 751120 1 T C scaffold13800 ScafM SNP 0027.scaffold00104 751220 1 C T scaffold13800 ScafM SNP 0027.scaffold00104 751357 1 A G scaffold13800 ScafM SNP 0027.scaffold00104 751397 1 T C scaffold13800 ScafM SNP 0027.scaffold00104 751581 1 A C scaffold13800 ScafM SNP 0027.scaffold00104 751587 1 A G scaffold13800 ScafM SNP 0027.scaffold00104 751669 1 C T scaffold13800 ScafM SNP 0027.scaffold00104 752676 1 T C scaffold13800 ScafM SNP 0027.scaffold00104 752912 1 T G scaffold13800 ScafM SNP 0027.scaffold00104 753215 2 TT GA scaffold13800 ScafM SNP 0027.scaffold00104 753268 1 C T scaffold13800 ScafM INDEL 0027.scaffold00104 753442 69 ..................................................................... TATTTGACTTTCACATGTTATAATGTAAGTGTGTGCTTTATCTTAACATATTGCTGTTAGCGACTTGTC scaffold13800 ScafM SNP 0027.scaffold00104 753462 1 C A scaffold13800 ScafM SNP 0027.scaffold00104 753520 1 T C scaffold13800 ScafM INDEL 0027.scaffold00104 753665 1 . T scaffold13800 ScafM SNP 0027.scaffold00104 753773 1 G A scaffold13800 ScafM SNP 0027.scaffold00104 753890 1 A G scaffold13800 ScafM SNP 0027.scaffold00104 753950 1 T C scaffold13800 ScafM SNP 0027.scaffold00104 755084 1 A C scaffold9598 ScafM SNP 0027.scaffold00104 755339 1 C T scaffold9598 ScafM SNP 0027.scaffold00104 755577 1 T C scaffold9598 ScafM SNP 0027.scaffold00104 755821 1 A C scaffold9598 ScafM INDEL 0027.scaffold00104 755996 1 . T scaffold9598 ScafM SNP 0027.scaffold00104 756915 1 C T scaffold9598 ScafM SNP 0027.scaffold00104 756917 1 T C scaffold9598 ScafM INDEL 0027.scaffold00104 756934 1 . T scaffold9598 ScafM INDEL 0027.scaffold00104 757294 1 . A scaffold9598 ScafM SNP 0027.scaffold00104 758468 1 C T scaffold9598 ScafM SNP 0027.scaffold00104 759942 1 G C scaffold9598 ScafM SNP 0027.scaffold00104 760842 1 A G scaffold9598 ScafM SNP 0027.scaffold00104 761781 1 C T scaffold9598 ScafM SNP 0027.scaffold00104 762250 1 T C scaffold9598 ScafM INDEL 0027.scaffold00104 762842 8 ........ TCCATCCA scaffold9598 ScafM INDEL 0027.scaffold00104 762858 2 CA .. scaffold9598 ScafM INDEL 0027.scaffold00104 763739 1 A . scaffold9598 ScafM SNP 0027.scaffold00104 764643 1 A G scaffold9598 ScafM SNP 0027.scaffold00104 764850 1 T A scaffold9598 ScafM INDEL 0027.scaffold00104 765046 4 .... GTGT scaffold9598 ScafM INDEL 0027.scaffold00104 768269 3 GTT ... scaffold9598 ScafM SNP 0027.scaffold00104 769711 1 G C scaffold9598 ScafM SNP 0027.scaffold00104 769905 1 G A scaffold9598 ScafM SNP 0027.scaffold00104 780591 1 A G scaffold42530 ScafM SNP 0027.scaffold00104 780933 1 A G scaffold42530 ReadM SNP 0027.scaffold00104 782948 1 C A - ScafM SNP 0027.scaffold00104 793050 1 G T scaffold28529 ScafM SNP 0027.scaffold00104 793195 1 C T scaffold28529 ScafM SNP 0027.scaffold00104 815935 1 T C scaffold8325 ScafM INDEL 0027.scaffold00104 816683 1 . A scaffold8325 ScafM SNP 0027.scaffold00104 816949 1 G A scaffold8325 ScafM SNP 0027.scaffold00104 817021 1 A G scaffold8325 ScafM INDEL 0027.scaffold00104 817154 3 ... ATA scaffold8325 ScafM SNP 0027.scaffold00104 817640 1 A T scaffold8325 ScafM SNP 0027.scaffold00104 817808 1 C A scaffold8325 Both SNP 0027.scaffold00104 819218 1 T C scaffold8325 ScafM SNP 0027.scaffold00104 820373 1 C A scaffold8325 ScafM INDEL 0027.scaffold00104 820581 3 ... GGC scaffold8325 ScafM SNP 0027.scaffold00104 821457 1 A G scaffold8325 ScafM SNP 0027.scaffold00104 821619 2 AA TT scaffold8325 ScafM SNP 0027.scaffold00104 824331 1 C G scaffold8325 ScafM INDEL 0027.scaffold00104 825088 1 G . scaffold8325 ScafM SNP 0027.scaffold00104 826741 1 C A scaffold8325 ScafM SNP 0027.scaffold00104 829511 1 A G scaffold8325 ScafM INDEL 0027.scaffold00104 832709 5 ATTTT ..... scaffold8325 ScafM SNP 0027.scaffold00104 832803 1 C A scaffold8325 ScafM SNP 0027.scaffold00104 833381 1 C T scaffold8325 ScafM SNP 0027.scaffold00104 833528 1 T C scaffold8325 ScafM SNP 0027.scaffold00104 833656 1 T C scaffold8325 ScafM SNP 0027.scaffold00104 833978 1 C G scaffold8325 ScafM SNP 0027.scaffold00104 834107 1 A T scaffold8325 ScafM SNP 0027.scaffold00104 834386 1 C A scaffold8325 ScafM INDEL 0027.scaffold00104 834516 1 T . scaffold8325 ScafM SNP 0027.scaffold00104 834673 1 A T scaffold8325 ScafM SNP 0027.scaffold00104 834757 1 A T scaffold8325 ScafM SNP 0027.scaffold00104 834934 1 A G scaffold8325 ScafM INDEL 0027.scaffold00104 838127 1 . C scaffold8325 ScafM SNP 0027.scaffold00104 838168 1 A G scaffold8325 Both SNP 0027.scaffold00104 838244 1 C T scaffold8325 ScafM SNP 0027.scaffold00104 838247 1 C T scaffold8325 ScafM SNP 0027.scaffold00104 838927 1 G A scaffold8325 ScafM SNP 0027.scaffold00104 839033 1 G A scaffold8325 ScafM SNP 0027.scaffold00104 839069 1 A C scaffold8325 ScafM SNP 0027.scaffold00104 840249 1 C T scaffold8325 ScafM SNP 0027.scaffold00104 843377 1 T C scaffold8325 ScafM SNP 0027.scaffold00104 844300 1 T G scaffold8325 ScafM SNP 0027.scaffold00104 847213 1 C T scaffold8325 ScafM SNP 0027.scaffold00104 847524 1 A G scaffold8325 ScafM SNP 0027.scaffold00104 848143 1 T G scaffold8325 ScafM SNP 0027.scaffold00104 856274 1 A G scaffold59278 ScafM SNP 0027.scaffold00104 856409 1 A G scaffold59278 ScafM SNP 0027.scaffold00104 856493 1 G A scaffold59278 ScafM SNP 0027.scaffold00104 856583 1 T C scaffold59278 ScafM INDEL 0027.scaffold00104 856614 1 . A scaffold59278 ScafM INDEL 0027.scaffold00104 871596 61 ............................................................. TCAATAACGCTCCCCCGCCACCAAAAAAGAATCAGATCATGCAATCTCTGCAGCAAAACCA scaffold14990 ScafM SNP 0027.scaffold00104 873228 1 C T scaffold65392 ScafM INDEL 0027.scaffold00104 873238 15 TCAGAGGCTCCAATC ............... scaffold65392 ScafM SNP 0027.scaffold00104 873613 1 A C scaffold65392 ScafM SNP 0027.scaffold00104 873624 1 T G scaffold65392 ScafM SNP 0027.scaffold00104 874085 1 T C scaffold65392 ScafM SNP 0027.scaffold00104 875479 1 A G C19719899 ScafM SNP 0027.scaffold00104 877456 1 C G C19710523 ScafM SNP 0027.scaffold00104 880345 1 A G scaffold23693 ScafM SNP 0027.scaffold00104 880407 1 A C scaffold23693 Both SNP 0027.scaffold00104 880495 1 C T scaffold23693 Both INDEL 0027.scaffold00104 880509 1 A . scaffold23693 ScafM SNP 0027.scaffold00104 880553 1 G A scaffold23693 ScafM SNP 0027.scaffold00104 880681 1 T G scaffold23693 Both INDEL 0027.scaffold00104 880746 1 T . scaffold23693 Both SNP 0027.scaffold00104 880904 1 C T scaffold23693 ScafM SNP 0027.scaffold00104 881334 1 T A scaffold23693 ScafM SNP 0027.scaffold00104 882056 1 C A scaffold23693 Both SNP 0027.scaffold00104 883822 1 T C scaffold23693 ScafM SNP 0027.scaffold00104 883931 1 C T scaffold23693 ScafM INDEL 0027.scaffold00104 883936 3 ATG ... scaffold23693 ScafM SNP 0027.scaffold00104 883943 1 G A scaffold23693 Both SNP 0027.scaffold00104 884365 1 C T scaffold23693 ScafM SNP 0027.scaffold00104 884703 1 A T scaffold1967 ScafM SNP 0027.scaffold00104 884715 1 A G scaffold1967 ScafM SNP 0027.scaffold00104 884724 1 C T scaffold1967 ScafM SNP 0027.scaffold00104 884746 1 C G scaffold1967 ScafM SNP 0027.scaffold00104 884757 2 AA GT scaffold1967 ScafM SNP 0027.scaffold00104 884783 1 G A scaffold1967 ScafM SNP 0027.scaffold00104 884797 1 T C scaffold1967 ScafM SNP 0027.scaffold00104 884801 1 A T scaffold1967 ScafM SNP 0027.scaffold00104 884819 1 G A scaffold1967 ScafM SNP 0027.scaffold00104 884822 2 AC TT scaffold1967 ScafM SNP 0027.scaffold00104 884864 1 A T scaffold1967 ScafM SNP 0027.scaffold00104 884867 1 T C scaffold1967 ScafM SNP 0027.scaffold00104 884873 1 C T scaffold1967 ScafM SNP 0027.scaffold00104 884875 1 C T scaffold1967 ScafM SNP 0027.scaffold00104 884880 1 C T scaffold1967 ScafM SNP 0027.scaffold00104 884904 1 C G scaffold1967 ScafM SNP 0027.scaffold00104 884911 2 TC AT scaffold1967 ScafM INDEL 0027.scaffold00104 884936 2 CT .. scaffold1967 ScafM INDEL 0027.scaffold00104 884939 1 C . scaffold1967 ScafM INDEL 0027.scaffold00104 884943 1 . C scaffold1967 ScafM INDEL 0027.scaffold00104 884947 1 A . scaffold1967 ScafM SNP 0027.scaffold00104 884978 1 A T scaffold1967 ScafM SNP 0027.scaffold00104 884988 1 A G scaffold1967 ScafM SNP 0027.scaffold00104 884992 1 T C scaffold1967 ScafM SNP 0027.scaffold00104 884998 1 A G scaffold1967 ScafM SNP 0027.scaffold00104 885018 1 T A scaffold1967 ScafM SNP 0027.scaffold00104 885024 1 A C scaffold1967 ScafM SNP 0027.scaffold00104 885026 1 T G scaffold1967 ScafM SNP 0027.scaffold00104 885038 1 C T scaffold1967 ScafM SNP 0027.scaffold00104 885041 1 C T scaffold1967 ReadM SNP 0027.scaffold00104 885422 1 T C - ScafM SNP 0027.scaffold00104 885576 1 A T scaffold7001 ScafM SNP 0027.scaffold00104 885626 1 C T scaffold7001 Both SNP 0027.scaffold00104 885839 1 A G scaffold7001 ScafM INDEL 0027.scaffold00104 886130 1 . T scaffold7001 ScafM SNP 0027.scaffold00104 887241 1 G T scaffold7001 ScafM SNP 0027.scaffold00104 887721 1 G A scaffold7001 Both SNP 0027.scaffold00104 887951 1 G C scaffold7001 Both INDEL 0027.scaffold00104 888030 1 . T scaffold7001 Both SNP 0027.scaffold00104 888166 1 A G scaffold7001 ScafM SNP 0027.scaffold00104 888647 1 G A scaffold7001 Both SNP 0027.scaffold00104 889027 1 T A scaffold7001 ReadM SNP 0027.scaffold00104 889505 1 A T - ReadM INDEL 0027.scaffold00104 896159 3 ... ACC - Both SNP 0027.scaffold00104 896363 1 T C scaffold28388 ReadM SNP 0027.scaffold00104 896496 1 T C - ReadM SNP 0027.scaffold00104 896854 1 G A - ReadM SNP 0027.scaffold00104 896884 1 T C - ReadM SNP 0027.scaffold00104 897151 1 A G - ScafM SNP 0027.scaffold00104 897376 1 C T scaffold28388 ScafM SNP 0027.scaffold00104 897445 1 T C scaffold28388 ScafM SNP 0027.scaffold00104 897713 1 G C scaffold28388 ReadM SNP 0027.scaffold00104 900036 1 A G - ReadM SNP 0027.scaffold00104 900726 1 C G - ReadM SNP 0027.scaffold00104 902132 1 T C - Both SNP 0027.scaffold00104 902155 1 A G scaffold28388 ReadM SNP 0027.scaffold00104 902724 1 A T - ReadM SNP 0027.scaffold00104 903360 1 T A - ScafM SNP 0027.scaffold00104 904717 1 G A scaffold17082 ScafM SNP 0027.scaffold00104 904768 1 C A scaffold17082 ScafM SNP 0027.scaffold00104 904795 1 G C scaffold17082 ScafM INDEL 0027.scaffold00104 905023 1 . T scaffold17082 ScafM SNP 0027.scaffold00104 905027 1 A T scaffold17082 ScafM INDEL 0027.scaffold00104 905102 4 .... TGAA scaffold17082 ScafM SNP 0027.scaffold00104 905103 1 C A scaffold17082 ReadM INDEL 0027.scaffold00104 905718 1 G . - ReadM INDEL 0027.scaffold00104 905928 1 . T - ReadM SNP 0027.scaffold00104 906599 1 G A - ReadM SNP 0027.scaffold00104 906664 1 G T - ScafM INDEL 0027.scaffold00104 909803 2 .. TT scaffold18304 ReadM SNP 0027.scaffold00104 909804 1 G T - ScafM INDEL 0027.scaffold00104 909804 7 ....... TTACCAT scaffold18304 ScafM SNP 0027.scaffold00104 909809 1 C T scaffold18304 ReadM SNP 0027.scaffold00104 911907 1 T G - ReadM SNP 0027.scaffold00104 912481 1 G A - ReadM SNP 0027.scaffold00104 913022 1 A C - ReadM SNP 0027.scaffold00104 913230 1 A G - ReadM INDEL 0027.scaffold00104 914455 1 . C - ReadM INDEL 0027.scaffold00104 914955 1 T . - ReadM SNP 0027.scaffold00104 915384 1 A G - ReadM SNP 0027.scaffold00104 915751 1 T C - ScafM SNP 0027.scaffold00104 916147 1 C A scaffold18304 ScafM SNP 0027.scaffold00104 916150 3 TCT AAA scaffold18304 Both SNP 0027.scaffold00104 916677 1 T C scaffold18304 Both SNP 0027.scaffold00104 917170 1 T C C19701347 ReadM SNP 0027.scaffold00104 917374 1 C T - ReadM SNP 0027.scaffold00104 917908 1 C T - ReadM SNP 0027.scaffold00104 917918 1 A T - ReadM SNP 0027.scaffold00104 918750 1 T C - ReadM SNP 0027.scaffold00104 919125 1 A G - ReadM SNP 0027.scaffold00104 919235 1 A C - ScafM SNP 0027.scaffold00104 919601 1 C T scaffold18304 ScafM INDEL 0027.scaffold00104 919963 2 .. AA scaffold18304 Both SNP 0027.scaffold00104 920024 1 A C scaffold18304 ScafM INDEL 0027.scaffold00104 920075 2 .. CT scaffold18304 ScafM INDEL 0027.scaffold00104 920083 57 ......................................................... TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold18304 ScafM SNP 0027.scaffold00104 920281 1 C T scaffold18304 ScafM SNP 0027.scaffold00104 920888 1 G A scaffold18304 ScafM SNP 0027.scaffold00104 922028 1 G T scaffold18304 Both INDEL 0027.scaffold00104 922130 1 T . scaffold18304 Both SNP 0027.scaffold00104 922256 1 A G scaffold18304 ScafM INDEL 0027.scaffold00104 922539 1 . T scaffold18304 ScafM SNP 0027.scaffold00104 923183 1 G T scaffold18304 ReadM SNP 0027.scaffold00104 923455 1 G T - ReadM SNP 0027.scaffold00104 923486 1 G A - ReadM SNP 0027.scaffold00104 923489 1 T A - ReadM SNP 0027.scaffold00104 923669 1 T C - ScafM SNP 0027.scaffold00104 924108 1 A T scaffold18304 ScafM SNP 0027.scaffold00104 924205 1 G C scaffold18304 Both SNP 0027.scaffold00104 924277 1 G T scaffold18304 Both INDEL 0027.scaffold00104 924320 1 G . scaffold18304 Both INDEL 0027.scaffold00104 924366 1 . T scaffold18304 ScafM SNP 0027.scaffold00104 924671 1 C T scaffold18304 Both SNP 0027.scaffold00104 924673 1 A G scaffold18304 ScafM SNP 0027.scaffold00104 925213 1 G A scaffold18304 Both SNP 0027.scaffold00104 926242 1 A C scaffold18304 ScafM SNP 0027.scaffold00104 927122 1 C T scaffold18304 ReadM SNP 0027.scaffold00104 940662 1 T C - ReadM SNP 0027.scaffold00104 941062 1 G T - ReadM INDEL 0027.scaffold00104 941149 1 . T - ReadM SNP 0027.scaffold00104 941439 1 A G - ReadM SNP 0027.scaffold00104 941953 1 T C - ReadM SNP 0027.scaffold00104 942892 1 T C - Both INDEL 0027.scaffold00104 943595 1 . A scaffold18304 ScafM SNP 0027.scaffold00104 944042 1 T A scaffold18304 Both SNP 0027.scaffold00104 944086 1 T C scaffold18304 ScafM SNP 0027.scaffold00104 944368 1 G A scaffold18304 ScafM INDEL 0027.scaffold00104 945073 2 .. TT scaffold18304 ScafM INDEL 0027.scaffold00104 945111 1 T . scaffold18304 ScafM SNP 0027.scaffold00104 945200 1 G T scaffold18304 ScafM SNP 0027.scaffold00104 946742 1 G C scaffold18304 ReadM SNP 0027.scaffold00104 947346 1 G C - Both SNP 0027.scaffold00104 947593 1 A C scaffold18304 ReadM SNP 0027.scaffold00104 948014 1 A G - Both SNP 0027.scaffold00104 948538 1 C T scaffold18304 ReadM SNP 0027.scaffold00104 948789 1 C T - ReadM SNP 0027.scaffold00104 948925 1 T C - ReadM SNP 0027.scaffold00104 949356 1 A G - ReadM SNP 0027.scaffold00104 949566 1 A G - ReadM SNP 0027.scaffold00104 950002 1 A G - Both SNP 0027.scaffold00104 950336 1 C A scaffold18304 ScafM SNP 0027.scaffold00104 950390 1 G T scaffold18304 ReadM SNP 0027.scaffold00104 953249 1 T C - ReadM SNP 0027.scaffold00104 953490 1 A G - ReadM SNP 0027.scaffold00104 953656 1 A T - ReadM SNP 0027.scaffold00104 954541 1 G C - ReadM SNP 0027.scaffold00104 954609 1 A T - ReadM SNP 0027.scaffold00104 954638 1 A G - ReadM SNP 0027.scaffold00104 954787 1 A C - ReadM SNP 0027.scaffold00104 956317 1 C T - Both SNP 0027.scaffold00104 956690 1 T C scaffold2167 ScafM SNP 0027.scaffold00104 957010 1 G T scaffold2167 Both SNP 0027.scaffold00104 958275 1 C G scaffold2167 ReadM SNP 0027.scaffold00104 958464 1 T C - ReadM SNP 0027.scaffold00104 959477 1 T C - ReadM SNP 0027.scaffold00104 960248 1 G A - ReadM SNP 0027.scaffold00104 960287 1 G A - ReadM SNP 0027.scaffold00104 961288 1 A T - ReadM SNP 0027.scaffold00104 962161 1 A G - ReadM SNP 0027.scaffold00104 963122 1 G A - ReadM SNP 0027.scaffold00104 963178 1 A G - ReadM SNP 0027.scaffold00104 964288 1 C T - ReadM SNP 0027.scaffold00104 965129 1 T C - ScafM SNP 0027.scaffold00104 965507 1 T A scaffold2167 ScafM SNP 0027.scaffold00104 966559 1 T G scaffold2167 ScafM SNP 0027.scaffold00104 966682 1 A G scaffold2167 ScafM INDEL 0027.scaffold00104 967083 2 .. GT scaffold2167 ScafM SNP 0027.scaffold00104 967224 1 T A scaffold2167 ReadM SNP 0027.scaffold00104 967783 1 T C - ScafM SNP 0027.scaffold00104 968432 1 G A scaffold2167 ScafM INDEL 0027.scaffold00104 968911 1 T . scaffold2167 ReadM INDEL 0027.scaffold00104 968978 1 . T - ReadM INDEL 0027.scaffold00104 969310 1 A . - ReadM SNP 0027.scaffold00104 969498 1 A G - ReadM SNP 0027.scaffold00104 972636 1 C T - ReadM SNP 0027.scaffold00104 972698 1 A G - ReadM SNP 0027.scaffold00104 972996 1 G A - ReadM SNP 0027.scaffold00104 973122 1 G A - ReadM SNP 0027.scaffold00104 973182 1 G T - ReadM SNP 0027.scaffold00104 973239 1 A C - ReadM SNP 0027.scaffold00104 973406 1 A T - ReadM SNP 0027.scaffold00104 973436 1 C T - ReadM SNP 0027.scaffold00104 973472 1 C T - ReadM SNP 0027.scaffold00104 973816 1 A T - ReadM SNP 0027.scaffold00104 973929 1 A C - ReadM SNP 0027.scaffold00104 974172 1 G A - Both SNP 0027.scaffold00104 974604 1 A G scaffold37667 ScafM SNP 0027.scaffold00104 974606 1 A T scaffold37667 Both SNP 0027.scaffold00104 974632 1 C T scaffold37667 Both SNP 0027.scaffold00104 974645 1 T C scaffold37667 ReadM SNP 0027.scaffold00104 974849 1 G A - ReadM SNP 0027.scaffold00104 974924 1 T C - ReadM SNP 0027.scaffold00104 975071 1 T C - ReadM SNP 0027.scaffold00104 975268 1 A G - ReadM INDEL 0027.scaffold00104 976273 2 AA .. - ReadM SNP 0027.scaffold00104 976529 1 C T - ReadM SNP 0027.scaffold00104 976831 1 T C - ReadM SNP 0027.scaffold00104 977000 1 T C - ScafM SNP 0027.scaffold00104 977145 1 C T scaffold2167 Both SNP 0027.scaffold00104 977204 1 T A scaffold2167 Both SNP 0027.scaffold00104 977334 1 T C scaffold2167 ReadM SNP 0027.scaffold00104 978274 1 T G - ReadM SNP 0027.scaffold00104 978713 1 G A - ScafM SNP 0027.scaffold00104 979021 1 T C scaffold2167 ScafM SNP 0027.scaffold00104 979099 1 T C scaffold2167 ReadM SNP 0027.scaffold00104 980883 1 C G - ReadM INDEL 0027.scaffold00104 981722 1 A . - ReadM SNP 0027.scaffold00104 981771 1 C T - ReadM SNP 0027.scaffold00104 982416 1 A G - ReadM SNP 0027.scaffold00104 982891 1 T A - ScafM INDEL 0027.scaffold00104 985975 67 ................................................................... TGGGTCGGCTGGTGGGGGGATGCGCTGGTGTAGTGGACAGAGTGTTGGTGGTGTTAGGGAACTCACT scaffold2167 ReadM SNP 0027.scaffold00104 987789 1 G A - ScafM SNP 0027.scaffold00104 987895 1 G A scaffold2167 ReadM SNP 0027.scaffold00104 988124 1 T C - ScafM SNP 0027.scaffold00104 989067 1 G A scaffold2167 ScafM SNP 0027.scaffold00104 1000770 1 T C scaffold32972 Both SNP 0027.scaffold00104 1001026 1 A G scaffold32972 ScafM INDEL 0027.scaffold00104 1001089 73 ......................................................................... CTTGATAGGATATGATTTTCAATCTTAAGTCTTAACCACTAAGTTTAAAATCTTGTATAAAAACACATAAATA scaffold32972 ScafM SNP 0027.scaffold00104 1001153 1 C T scaffold32972 ScafM SNP 0027.scaffold00104 1001388 1 T G scaffold32972 ScafM SNP 0027.scaffold00104 1001682 1 C T scaffold32972 ScafM SNP 0027.scaffold00104 1001684 1 T C scaffold32972 ReadM SNP 0027.scaffold00104 1002885 1 G A - ReadM SNP 0027.scaffold00104 1002964 1 A C - ScafM SNP 0027.scaffold00104 1004100 1 T C scaffold15149 ScafM SNP 0027.scaffold00104 1004165 1 T C scaffold15149 ScafM SNP 0027.scaffold00104 1004198 1 T C scaffold15149 ScafM SNP 0027.scaffold00104 1004285 1 C A scaffold15149 Both SNP 0027.scaffold00104 1004524 1 C G scaffold15149 ScafM SNP 0027.scaffold00104 1004552 1 A C scaffold15149 ScafM SNP 0027.scaffold00104 1004561 1 T A scaffold15149 ScafM SNP 0027.scaffold00104 1004577 1 A C scaffold15149 ScafM SNP 0027.scaffold00104 1004581 1 A T scaffold15149 ScafM SNP 0027.scaffold00104 1004592 1 A G scaffold15149 ScafM SNP 0027.scaffold00104 1004605 1 T C scaffold15149 ScafM SNP 0027.scaffold00104 1004727 1 C T scaffold15149 Both SNP 0027.scaffold00104 1004789 1 T C scaffold15149 ScafM SNP 0027.scaffold00104 1004795 1 C G scaffold15149 ScafM INDEL 0027.scaffold00104 1004939 1 T . scaffold15149 ScafM INDEL 0027.scaffold00104 1004955 2 TC .. scaffold15149 ScafM SNP 0027.scaffold00104 1004969 1 G A scaffold15149 ScafM SNP 0027.scaffold00104 1005007 1 C A scaffold15149 ScafM SNP 0027.scaffold00104 1005053 1 C T scaffold15149 ScafM SNP 0027.scaffold00104 1005204 1 A T scaffold15149 ScafM SNP 0027.scaffold00104 1005533 1 G A scaffold15149 ScafM INDEL 0027.scaffold00104 1005538 1 . T scaffold15149 ScafM SNP 0027.scaffold00104 1005542 1 C T scaffold15149 ScafM SNP 0027.scaffold00104 1005547 1 G A scaffold15149 ReadM SNP 0027.scaffold00104 1008554 1 C T - Both SNP 0027.scaffold00104 1008838 1 C T scaffold16816 ScafM SNP 0027.scaffold00104 1008933 1 A T scaffold16816 ScafM SNP 0027.scaffold00104 1008936 1 A T scaffold16816 ReadM SNP 0027.scaffold00104 1009115 1 C G - ScafM SNP 0027.scaffold00104 1009759 1 T C scaffold33465 ScafM SNP 0027.scaffold00104 1009805 1 A G scaffold33465 ScafM SNP 0027.scaffold00104 1009822 1 T C scaffold33465 Both SNP 0027.scaffold00104 1009834 1 A G scaffold33465 ScafM SNP 0027.scaffold00104 1009846 1 C A scaffold33465 ScafM SNP 0027.scaffold00104 1009863 1 A T scaffold33465 ReadM SNP 0027.scaffold00104 1009864 1 C T - ScafM INDEL 0027.scaffold00104 1009906 1 C . scaffold33465 ScafM SNP 0027.scaffold00104 1009939 1 C G scaffold33465 ScafM SNP 0027.scaffold00104 1009944 1 T C scaffold33465 ScafM SNP 0027.scaffold00104 1010130 1 C G scaffold33465 ScafM SNP 0027.scaffold00104 1010160 1 G A scaffold33465 ScafM SNP 0027.scaffold00104 1010363 1 G T scaffold33465 ScafM INDEL 0027.scaffold00104 1010369 1 . A scaffold33465 ScafM INDEL 0027.scaffold00104 1010380 7 ....... GAATTTT scaffold33465 ScafM INDEL 0027.scaffold00104 1010381 1 . C scaffold33465 ScafM SNP 0027.scaffold00104 1010387 1 G T scaffold33465 ScafM SNP 0027.scaffold00104 1010396 1 C T scaffold33465 ScafM SNP 0027.scaffold00104 1010418 1 T A scaffold33465 ScafM SNP 0027.scaffold00104 1010536 1 T C scaffold8099 ScafM SNP 0027.scaffold00104 1010553 1 G C scaffold8099 ScafM INDEL 0027.scaffold00104 1010556 5 ..... TCAAA scaffold8099 ScafM SNP 0027.scaffold00104 1010643 3 TTT CGC scaffold8099 ScafM INDEL 0027.scaffold00104 1010648 3 ... ATT scaffold8099 ScafM SNP 0027.scaffold00104 1010801 2 GC AT scaffold7666 ScafM INDEL 0027.scaffold00104 1010818 2 CT .. scaffold7666 ScafM SNP 0027.scaffold00104 1010844 1 C T scaffold7666 ScafM SNP 0027.scaffold00104 1010858 1 T C scaffold7666 ScafM SNP 0027.scaffold00104 1010893 1 T C scaffold7666 ScafM SNP 0027.scaffold00104 1010922 1 G A scaffold7666 ScafM SNP 0027.scaffold00104 1010932 1 A G scaffold7666 ScafM SNP 0027.scaffold00104 1010940 1 A G scaffold7666 ScafM SNP 0027.scaffold00104 1010957 1 C T scaffold7666 ScafM INDEL 0027.scaffold00104 1011045 1 T . scaffold7666 ScafM INDEL 0027.scaffold00104 1011055 1 . A scaffold7666 ScafM SNP 0027.scaffold00104 1011086 1 G A scaffold7666 ScafM SNP 0027.scaffold00104 1011104 1 T A scaffold7666 ScafM INDEL 0027.scaffold00104 1011115 1 A . scaffold7666 ScafM SNP 0027.scaffold00104 1011122 1 C T scaffold7666 ScafM SNP 0027.scaffold00104 1011146 1 C T scaffold7666 ScafM SNP 0027.scaffold00104 1011175 1 T G scaffold7666 ScafM SNP 0027.scaffold00104 1011195 1 A G scaffold7666 ScafM SNP 0027.scaffold00104 1011226 1 G A scaffold7666 ScafM INDEL 0027.scaffold00104 1011231 1 . T scaffold7666 ReadM SNP 0027.scaffold00104 1011277 1 C T - ScafM SNP 0027.scaffold00104 1011530 1 A G scaffold33465 ScafM SNP 0027.scaffold00104 1011576 1 C T scaffold33465 ScafM SNP 0027.scaffold00104 1011602 1 T C scaffold33465 ScafM SNP 0027.scaffold00104 1011644 1 G A scaffold33465 ScafM SNP 0027.scaffold00104 1011664 1 T C scaffold33465 ScafM INDEL 0027.scaffold00104 1011732 1 C . scaffold33465 ScafM SNP 0027.scaffold00104 1011787 1 C T scaffold33465 ScafM SNP 0027.scaffold00104 1012183 1 A C scaffold33465 ScafM SNP 0027.scaffold00104 1012189 1 C A scaffold33465 ScafM SNP 0027.scaffold00104 1012197 1 A T scaffold33465 ScafM SNP 0027.scaffold00104 1012215 1 G A scaffold33465 ScafM SNP 0027.scaffold00104 1012252 1 A T scaffold33465 ScafM SNP 0027.scaffold00104 1012336 1 A G scaffold33465 ScafM SNP 0027.scaffold00104 1012352 1 A T scaffold33465 ScafM SNP 0027.scaffold00104 1012367 1 A T scaffold33465 ScafM SNP 0027.scaffold00104 1012369 1 C A scaffold33465 Both SNP 0027.scaffold00104 1012732 1 C T scaffold33465 ReadM SNP 0027.scaffold00104 1012993 1 T C - ReadM SNP 0027.scaffold00104 1013111 1 T A - ReadM SNP 0027.scaffold00104 1013245 1 C G - ReadM SNP 0027.scaffold00104 1013273 1 T C - ReadM SNP 0027.scaffold00104 1013295 1 T C - ReadM SNP 0027.scaffold00104 1013388 1 A G - ReadM SNP 0027.scaffold00104 1013442 1 C T - ReadM SNP 0027.scaffold00104 1013629 1 T A - ReadM SNP 0027.scaffold00104 1013943 1 A G - ReadM SNP 0027.scaffold00104 1014060 1 A G - ReadM SNP 0027.scaffold00104 1014073 1 T C - ScafM SNP 0027.scaffold00104 1014454 1 T A scaffold33465 ReadM SNP 0027.scaffold00104 1014991 1 G A - ReadM SNP 0027.scaffold00104 1015187 1 T C - ReadM INDEL 0027.scaffold00104 1016404 1 . T - ReadM SNP 0027.scaffold00104 1016629 1 A C - ReadM SNP 0027.scaffold00104 1016730 1 T C - ScafM SNP 0027.scaffold00104 1017902 1 A T scaffold3529 Both SNP 0027.scaffold00104 1017913 1 C T scaffold3529 ScafM SNP 0027.scaffold00104 1017964 1 C T scaffold3529 Both SNP 0027.scaffold00104 1017989 1 C A scaffold3529 ScafM SNP 0027.scaffold00104 1018247 1 A G scaffold3529 ScafM SNP 0027.scaffold00104 1018503 1 A T scaffold3529 ScafM INDEL 0027.scaffold00104 1018508 1 G . scaffold3529 ScafM SNP 0027.scaffold00104 1018635 1 A G scaffold3529 ScafM SNP 0027.scaffold00104 1018695 1 C T scaffold3529 ReadM SNP 0027.scaffold00104 1018741 1 A C - ReadM SNP 0027.scaffold00104 1018934 1 T C - ReadM SNP 0027.scaffold00104 1019033 1 T G - ReadM SNP 0027.scaffold00104 1019257 1 A G - ReadM SNP 0027.scaffold00104 1019350 1 T C - ReadM SNP 0027.scaffold00104 1019355 1 G T - ReadM SNP 0027.scaffold00104 1022552 1 T A - ReadM SNP 0027.scaffold00104 1022686 1 A T - ReadM SNP 0027.scaffold00104 1022850 1 A G - ReadM SNP 0027.scaffold00104 1023386 1 G T - ReadM SNP 0027.scaffold00104 1023428 1 A G - ScafM SNP 0027.scaffold00104 1023609 1 A G scaffold16302 ScafM SNP 0027.scaffold00104 1023629 1 T C scaffold16302 ScafM SNP 0027.scaffold00104 1024576 1 C G scaffold16302 ScafM SNP 0027.scaffold00104 1024678 1 A G scaffold16302 ScafM SNP 0027.scaffold00104 1024682 1 C T scaffold16302 ScafM SNP 0027.scaffold00104 1024693 1 A C scaffold16302 ScafM SNP 0027.scaffold00104 1024798 1 C T scaffold16302 ScafM SNP 0027.scaffold00104 1024853 1 G A scaffold16302 Both SNP 0027.scaffold00104 1024997 1 T C scaffold16302 ScafM SNP 0027.scaffold00104 1025159 1 C T scaffold16302 ScafM SNP 0027.scaffold00104 1025225 1 G A scaffold16302 ReadM INDEL 0027.scaffold00104 1025422 3 TGT ... - Both SNP 0027.scaffold00104 1025815 1 T C scaffold43197 Both SNP 0027.scaffold00104 1025967 1 C T scaffold43197 Both SNP 0027.scaffold00104 1025972 1 A G scaffold43197 Both INDEL 0027.scaffold00104 1026072 1 A . scaffold43197 Both SNP 0027.scaffold00104 1026227 1 T A scaffold43197 Both SNP 0027.scaffold00104 1026264 1 T C scaffold43197 ScafM SNP 0027.scaffold00104 1026346 1 A G scaffold43197 ScafM INDEL 0027.scaffold00104 1026357 1 . T scaffold43197 Both SNP 0027.scaffold00104 1026401 1 A C scaffold43197 ReadM SNP 0027.scaffold00104 1026580 1 C T - ReadM SNP 0027.scaffold00104 1026935 1 C T - ScafM SNP 0027.scaffold00104 1027266 1 G A C19668453 Both SNP 0027.scaffold00104 1027840 1 C T C19668453 Both SNP 0027.scaffold00104 1028944 1 A C scaffold56661 ScafM SNP 0027.scaffold00104 1029162 1 C T scaffold56661 ScafM SNP 0027.scaffold00104 1029220 1 T C scaffold56661 Both SNP 0027.scaffold00104 1029341 1 G C scaffold56661 ScafM INDEL 0027.scaffold00104 1029537 1 T . scaffold56661 ScafM SNP 0027.scaffold00104 1029595 1 C A scaffold56661 ScafM INDEL 0027.scaffold00104 1029649 1 . A scaffold56661 ScafM INDEL 0027.scaffold00104 1029816 1 . T scaffold56661 Both SNP 0027.scaffold00104 1029838 1 G C scaffold56661 ScafM SNP 0027.scaffold00104 1029887 1 C A scaffold56661 ScafM SNP 0027.scaffold00104 1029911 1 G T scaffold56661 ScafM SNP 0027.scaffold00104 1030234 1 C T scaffold56661 ScafM SNP 0027.scaffold00104 1030253 1 T A scaffold56661 ScafM SNP 0027.scaffold00104 1030309 1 C G scaffold56661 ScafM INDEL 0027.scaffold00104 1030348 1 A . scaffold56661 ScafM SNP 0027.scaffold00104 1030352 1 G T scaffold56661 ScafM SNP 0027.scaffold00104 1030374 1 A C scaffold56661 ScafM SNP 0027.scaffold00104 1030392 1 T C scaffold56661 ScafM SNP 0027.scaffold00104 1030476 1 A C scaffold56661 ScafM SNP 0027.scaffold00104 1030631 1 A C scaffold56661 ReadM SNP 0027.scaffold00104 1031275 1 T C - ReadM SNP 0027.scaffold00104 1031308 1 G A - ReadM SNP 0027.scaffold00104 1031895 1 A T - ReadM SNP 0027.scaffold00104 1032091 1 G T - ReadM SNP 0027.scaffold00104 1032227 1 T A - ReadM SNP 0027.scaffold00104 1032503 1 A T - ReadM SNP 0027.scaffold00104 1032673 1 C A - ReadM SNP 0027.scaffold00104 1032681 1 A G - ReadM SNP 0027.scaffold00104 1032863 1 A C - Both SNP 0027.scaffold00104 1033634 1 C G scaffold36827 Both SNP 0027.scaffold00104 1033928 1 G T scaffold36827 Both INDEL 0027.scaffold00104 1034505 1 T . scaffold36827 Both SNP 0027.scaffold00104 1035218 1 G A scaffold36827 ScafM SNP 0027.scaffold00104 1035447 1 A T scaffold36827 ScafM SNP 0027.scaffold00104 1036373 1 G T scaffold36827 Both SNP 0027.scaffold00104 1036629 1 T G scaffold36827 ScafM SNP 0027.scaffold00104 1037145 1 C T scaffold36827 Both SNP 0027.scaffold00104 1038683 1 T A scaffold36827 ScafM SNP 0027.scaffold00104 1038781 1 C T scaffold36827 ScafM SNP 0027.scaffold00104 1039238 1 A G scaffold36827 ScafM SNP 0027.scaffold00104 1039847 1 C G scaffold36827 ScafM SNP 0027.scaffold00104 1040268 1 A C scaffold36827 ScafM SNP 0027.scaffold00104 1040323 1 C T scaffold36827 ScafM SNP 0027.scaffold00104 1040340 1 A T scaffold36827 Both INDEL 0027.scaffold00104 1040476 2 .. GA scaffold36827 ScafM SNP 0027.scaffold00104 1040612 1 T G scaffold36827 ScafM INDEL 0027.scaffold00104 1040671 1 A . scaffold36827 ScafM SNP 0027.scaffold00104 1040699 1 G A scaffold36827 ScafM SNP 0027.scaffold00104 1041031 1 C T scaffold36827 Both SNP 0027.scaffold00104 1042016 1 G T scaffold36827 Both SNP 0027.scaffold00104 1042150 1 G A scaffold36827 ReadM INDEL 0027.scaffold00104 1042385 2 .. AT - ScafM SNP 0027.scaffold00104 1045512 1 A C scaffold5131 ScafM INDEL 0027.scaffold00104 1045514 1 G . scaffold5131 ScafM INDEL 0027.scaffold00104 1045540 5 ..... TCTTT scaffold5131 ScafM SNP 0027.scaffold00104 1045548 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1045553 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1045616 1 G C scaffold5131 ScafM SNP 0027.scaffold00104 1045686 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1045743 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1045755 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1045864 1 T G scaffold5131 Both SNP 0027.scaffold00104 1046014 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1046038 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1046056 1 G T scaffold5131 ScafM SNP 0027.scaffold00104 1046096 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1046146 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1046148 1 C G scaffold5131 ScafM SNP 0027.scaffold00104 1046153 1 C A scaffold5131 ScafM SNP 0027.scaffold00104 1046176 1 T C scaffold5131 ReadM INDEL 0027.scaffold00104 1046187 1 T . - ScafM INDEL 0027.scaffold00104 1046187 2 TT .. scaffold5131 ScafM SNP 0027.scaffold00104 1046220 1 G C scaffold5131 Both SNP 0027.scaffold00104 1046275 1 G T scaffold5131 Both SNP 0027.scaffold00104 1046339 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1046362 1 A C scaffold5131 ScafM SNP 0027.scaffold00104 1046376 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1046472 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1046482 1 G C scaffold5131 ScafM SNP 0027.scaffold00104 1046487 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1046504 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1046519 1 C A scaffold5131 ScafM SNP 0027.scaffold00104 1046522 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1046565 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1046568 1 C G scaffold5131 ScafM INDEL 0027.scaffold00104 1046630 2 .. GC scaffold5131 ScafM SNP 0027.scaffold00104 1046634 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1046650 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1046652 1 A G scaffold5131 Both SNP 0027.scaffold00104 1046761 1 G C scaffold5131 ScafM SNP 0027.scaffold00104 1046928 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1047021 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1047026 1 T A scaffold5131 Both SNP 0027.scaffold00104 1047037 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1047045 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1047055 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1047127 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1047139 1 A T scaffold5131 ScafM SNP 0027.scaffold00104 1047161 2 TT GC scaffold5131 ScafM SNP 0027.scaffold00104 1047203 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1047211 1 T A scaffold5131 ScafM SNP 0027.scaffold00104 1047311 1 A T scaffold5131 ScafM SNP 0027.scaffold00104 1047329 1 A C scaffold5131 ScafM SNP 0027.scaffold00104 1047360 1 A C scaffold5131 ScafM SNP 0027.scaffold00104 1047369 1 A C scaffold5131 ScafM SNP 0027.scaffold00104 1047488 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1047565 1 A T scaffold5131 ScafM SNP 0027.scaffold00104 1047569 1 G C scaffold5131 ScafM SNP 0027.scaffold00104 1047582 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1047594 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1047623 1 T C scaffold5131 Both SNP 0027.scaffold00104 1047626 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1047641 1 T C scaffold5131 ScafM INDEL 0027.scaffold00104 1047666 2 .. GA scaffold5131 ScafM INDEL 0027.scaffold00104 1047675 1 . G scaffold5131 ScafM INDEL 0027.scaffold00104 1047677 4 .... GAGT scaffold5131 ScafM SNP 0027.scaffold00104 1047722 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1047744 1 G A scaffold5131 ReadM INDEL 0027.scaffold00104 1047756 1 T . - ScafM SNP 0027.scaffold00104 1047757 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1047766 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1047768 1 T C scaffold5131 ScafM SNP 0027.scaffold00104 1047775 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1047797 1 A G scaffold5131 Both SNP 0027.scaffold00104 1047803 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1047842 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1047858 1 T G scaffold5131 ScafM SNP 0027.scaffold00104 1047866 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1047912 1 G A scaffold5131 Both SNP 0027.scaffold00104 1047928 1 C G scaffold5131 ScafM SNP 0027.scaffold00104 1047941 1 G T scaffold5131 ScafM INDEL 0027.scaffold00104 1047974 1 G . scaffold5131 Both SNP 0027.scaffold00104 1047983 1 T G scaffold5131 ScafM INDEL 0027.scaffold00104 1048272 2 .. TT scaffold5131 ScafM SNP 0027.scaffold00104 1048316 1 G A scaffold5131 ScafM SNP 0027.scaffold00104 1048329 1 G T scaffold5131 ScafM SNP 0027.scaffold00104 1048331 1 T A scaffold5131 ScafM SNP 0027.scaffold00104 1048349 1 G T scaffold5131 ScafM SNP 0027.scaffold00104 1048386 1 T G scaffold5131 ReadM SNP 0027.scaffold00104 1048512 1 A T - ReadM SNP 0027.scaffold00104 1048755 1 A G - ScafM INDEL 0027.scaffold00104 1048757 3 AAA ... scaffold23617 ScafM SNP 0027.scaffold00104 1048761 1 A G scaffold23617 Both SNP 0027.scaffold00104 1048814 1 A G scaffold23617 ScafM SNP 0027.scaffold00104 1049564 1 G T scaffold23617 ScafM INDEL 0027.scaffold00104 1049964 4 .... GGTT scaffold23617 ScafM SNP 0027.scaffold00104 1049966 1 G T scaffold23617 ReadM SNP 0027.scaffold00104 1049969 1 T C - ScafM SNP 0027.scaffold00104 1049971 1 A T scaffold23617 ScafM INDEL 0027.scaffold00104 1050214 1 . A scaffold23617 ScafM INDEL 0027.scaffold00104 1050371 1 . T scaffold23617 ReadM SNP 0027.scaffold00104 1050372 1 T A - Both SNP 0027.scaffold00104 1050753 1 T C scaffold23617 Both SNP 0027.scaffold00104 1050872 1 C T scaffold23617 ScafM SNP 0027.scaffold00104 1050929 2 CA TT scaffold23617 Both SNP 0027.scaffold00104 1050940 1 C T scaffold23617 Both SNP 0027.scaffold00104 1051588 1 A G scaffold23617 Both SNP 0027.scaffold00104 1051624 1 A T scaffold23617 ScafM SNP 0027.scaffold00104 1052266 1 T A scaffold23617 Both SNP 0027.scaffold00104 1052417 1 T C scaffold23617 ScafM SNP 0027.scaffold00104 1052632 1 A G scaffold23617 Both SNP 0027.scaffold00104 1052693 1 T C scaffold23617 Both SNP 0027.scaffold00104 1052902 2 CA TG scaffold23617 ScafM SNP 0027.scaffold00104 1052983 1 C T scaffold23617 Both INDEL 0027.scaffold00104 1053304 1 A . scaffold23617 ScafM SNP 0027.scaffold00104 1053502 1 T G scaffold23617 ScafM SNP 0027.scaffold00104 1053535 1 A G scaffold23617 Both SNP 0027.scaffold00104 1054598 1 T C scaffold23617 ScafM SNP 0027.scaffold00104 1054727 1 T C scaffold23617 ScafM SNP 0027.scaffold00104 1055175 1 T A scaffold23617 Both SNP 0027.scaffold00104 1055272 1 G A scaffold23617 Both SNP 0027.scaffold00104 1055422 1 C A scaffold23617 ReadM INDEL 0027.scaffold00104 1055446 1 A . - ScafM INDEL 0027.scaffold00104 1055446 2 AA .G scaffold23617 Both INDEL 0027.scaffold00104 1055597 1 . C scaffold23617 Both SNP 0027.scaffold00104 1055687 1 T C scaffold23617 ScafM SNP 0027.scaffold00104 1056079 1 C T scaffold23617 Both SNP 0027.scaffold00104 1056595 1 A C scaffold23617 ScafM SNP 0027.scaffold00104 1056607 1 T C scaffold23617 Both SNP 0027.scaffold00104 1057377 1 A C scaffold23617 ScafM SNP 0027.scaffold00104 1058816 1 A G scaffold23617 ScafM SNP 0027.scaffold00104 1060533 1 G A scaffold23617 ScafM INDEL 0027.scaffold00104 1061169 5 CTTTT ....G scaffold38700 ScafM SNP 0027.scaffold00104 1061176 6 TTTTTT AAGGAA scaffold38700 ScafM SNP 0027.scaffold00104 1061186 1 A C scaffold38700 ScafM INDEL 0027.scaffold00104 1061188 2 GG .. scaffold38700 ScafM INDEL 0027.scaffold00104 1061192 4 CTAT ..GG scaffold38700 ScafM SNP 0027.scaffold00104 1061197 1 A G scaffold38700 ScafM SNP 0027.scaffold00104 1061199 1 A C scaffold38700 ScafM INDEL 0027.scaffold00104 1061201 2 AA .T scaffold38700 ScafM SNP 0027.scaffold00104 1061207 1 A T scaffold38700 ScafM INDEL 0027.scaffold00104 1061210 1 G . scaffold38700 ScafM SNP 0027.scaffold00104 1061223 1 G A scaffold38700 ScafM INDEL 0027.scaffold00104 1061242 1 . G scaffold38700 ScafM SNP 0027.scaffold00104 1061259 1 C T scaffold38700 ScafM SNP 0027.scaffold00104 1061264 1 G T scaffold38700 ScafM INDEL 0027.scaffold00104 1064822 1 . G scaffold2506 Both SNP 0027.scaffold00104 1065308 1 T C scaffold2506 ReadM SNP 0027.scaffold00104 1065450 1 A G - ReadM SNP 0027.scaffold00104 1065533 1 G A - ReadM SNP 0027.scaffold00104 1065739 1 A C - ReadM SNP 0027.scaffold00104 1065754 1 A C - ReadM SNP 0027.scaffold00104 1067332 1 C T - Both SNP 0027.scaffold00104 1067494 1 G A scaffold2506 ReadM INDEL 0027.scaffold00104 1067619 1 . T - ReadM SNP 0027.scaffold00104 1067660 1 T C - ReadM SNP 0027.scaffold00104 1067817 1 T G - ReadM SNP 0027.scaffold00104 1067899 1 G A - ReadM SNP 0027.scaffold00104 1067912 1 A T - Both INDEL 0027.scaffold00104 1068036 1 T . scaffold2506 ScafM SNP 0027.scaffold00104 1068161 1 T A scaffold2506 ReadM SNP 0027.scaffold00104 1068378 1 T C - Both SNP 0027.scaffold00104 1068577 1 C G scaffold2506 Both SNP 0027.scaffold00104 1068806 1 A G scaffold2506 ScafM SNP 0027.scaffold00104 1068815 1 C G scaffold2506 ScafM SNP 0027.scaffold00104 1068878 1 G A scaffold2506 ScafM SNP 0027.scaffold00104 1068906 1 T A scaffold2506 Both SNP 0027.scaffold00104 1069245 1 T C scaffold2506 ReadM SNP 0027.scaffold00104 1069410 1 G A - ReadM INDEL 0027.scaffold00104 1069477 1 T . - ReadM SNP 0027.scaffold00104 1069481 1 G A - Both SNP 0027.scaffold00104 1069550 1 T C scaffold2506 ReadM SNP 0027.scaffold00104 1069606 1 T C - ReadM SNP 0027.scaffold00104 1069665 1 T C - ReadM SNP 0027.scaffold00104 1069944 1 A G - ReadM SNP 0027.scaffold00104 1070007 1 C T - ReadM SNP 0027.scaffold00104 1070252 1 C T - ReadM SNP 0027.scaffold00104 1070312 1 G A - ReadM SNP 0027.scaffold00104 1070319 1 A G - ReadM SNP 0027.scaffold00104 1070385 1 G A - ReadM SNP 0027.scaffold00104 1070614 1 T C - ReadM SNP 0027.scaffold00104 1070616 1 A G - ReadM SNP 0027.scaffold00104 1071102 1 C T - ReadM SNP 0027.scaffold00104 1073871 1 C A - ReadM SNP 0027.scaffold00104 1074206 1 T C - ReadM SNP 0027.scaffold00104 1074261 1 T C - ReadM SNP 0027.scaffold00104 1074287 1 A C - Both INDEL 0027.scaffold00104 1075034 3 ... GGG scaffold2506 ReadM SNP 0027.scaffold00104 1075127 1 G A - ReadM SNP 0027.scaffold00104 1075199 1 A G - ReadM SNP 0027.scaffold00104 1075243 1 A T - ReadM SNP 0027.scaffold00104 1075253 1 T C - ScafM SNP 0027.scaffold00104 1075329 2 GG TA scaffold2506 Both SNP 0027.scaffold00104 1075389 1 A C scaffold2506 ScafM SNP 0027.scaffold00104 1075481 1 G C scaffold2506 ReadM SNP 0027.scaffold00104 1075693 1 C T - ReadM SNP 0027.scaffold00104 1075812 1 A G - ReadM SNP 0027.scaffold00104 1075925 1 C T - ReadM SNP 0027.scaffold00104 1075936 1 A G - ReadM SNP 0027.scaffold00104 1075959 1 T G - ScafM INDEL 0027.scaffold00104 1076041 1 . A scaffold2506 ReadM INDEL 0027.scaffold00104 1076052 1 . T - Both SNP 0027.scaffold00104 1076148 1 T C scaffold2506 Both SNP 0027.scaffold00104 1076328 1 T A scaffold2506 Both SNP 0027.scaffold00104 1076609 1 A C scaffold2506 ScafM SNP 0027.scaffold00104 1076739 1 C T scaffold2506 ReadM SNP 0027.scaffold00104 1077648 1 T G - ReadM SNP 0027.scaffold00104 1077758 1 G A - ReadM SNP 0027.scaffold00104 1077811 1 T C - ReadM INDEL 0027.scaffold00104 1077871 1 . T - ReadM SNP 0027.scaffold00104 1077923 1 A G - ReadM SNP 0027.scaffold00104 1077999 1 A G - ReadM SNP 0027.scaffold00104 1078043 1 C T - ReadM SNP 0027.scaffold00104 1078068 1 G A - ReadM SNP 0027.scaffold00104 1078111 1 A G - ReadM SNP 0027.scaffold00104 1078134 1 A C - ReadM SNP 0027.scaffold00104 1079286 1 C T - ReadM SNP 0027.scaffold00104 1080905 1 A G - ReadM SNP 0027.scaffold00104 1081255 1 T A - ReadM SNP 0027.scaffold00104 1081268 1 T C - ReadM SNP 0027.scaffold00104 1081301 1 G T - ReadM INDEL 0027.scaffold00104 1081331 1 A . - ReadM SNP 0027.scaffold00104 1081484 1 A T - ReadM SNP 0027.scaffold00104 1081660 1 G T - ReadM SNP 0027.scaffold00104 1081674 1 A G - ReadM SNP 0027.scaffold00104 1081694 1 T C - ReadM SNP 0027.scaffold00104 1081855 1 C T - ReadM SNP 0027.scaffold00104 1081928 1 C T - ReadM SNP 0027.scaffold00104 1082136 1 A G - ReadM SNP 0027.scaffold00104 1082181 1 A T - ReadM SNP 0027.scaffold00104 1082348 1 A T - ReadM SNP 0027.scaffold00104 1082388 1 C A - ReadM SNP 0027.scaffold00104 1082456 1 A T - ReadM SNP 0027.scaffold00104 1082832 1 A C - ReadM SNP 0027.scaffold00104 1085986 1 G T - ReadM SNP 0027.scaffold00104 1086060 1 C T - Both SNP 0027.scaffold00104 1086273 1 G A scaffold3570 ScafM INDEL 0027.scaffold00104 1086341 1 . A scaffold3570 ScafM SNP 0027.scaffold00104 1086482 1 G T scaffold3570 ScafM SNP 0027.scaffold00104 1086506 1 C A scaffold3570 ScafM SNP 0027.scaffold00104 1086667 1 T C scaffold3570 ScafM INDEL 0027.scaffold00104 1086711 31 ............................... AATGAAATGCTGAGATCGGTGCCAAACAAAC scaffold3570 ScafM SNP 0027.scaffold00104 1086736 1 T G scaffold3570 ScafM SNP 0027.scaffold00104 1086750 1 C G scaffold3570 ScafM INDEL 0027.scaffold00104 1089191 6 ...... AAACGA scaffold3570 ScafM SNP 0027.scaffold00104 1089300 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1089321 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1089375 1 T A scaffold3570 ScafM SNP 0027.scaffold00104 1089382 1 T G scaffold3570 ScafM SNP 0027.scaffold00104 1089384 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1089386 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1089420 1 T C scaffold3570 ScafM SNP 0027.scaffold00104 1089427 1 A C scaffold3570 ScafM INDEL 0027.scaffold00104 1089596 2 .. GA scaffold3570 ScafM SNP 0027.scaffold00104 1089610 1 C T scaffold3570 ScafM SNP 0027.scaffold00104 1089615 1 C T scaffold3570 ReadM SNP 0027.scaffold00104 1089825 1 C G - ReadM SNP 0027.scaffold00104 1090010 1 T G - ReadM SNP 0027.scaffold00104 1090042 1 G A - ReadM SNP 0027.scaffold00104 1090337 1 C T - ReadM SNP 0027.scaffold00104 1092721 1 T C - ReadM SNP 0027.scaffold00104 1093118 1 G T - ReadM SNP 0027.scaffold00104 1093559 1 G A - ReadM SNP 0027.scaffold00104 1093587 1 A C - ReadM SNP 0027.scaffold00104 1093600 1 G A - ReadM SNP 0027.scaffold00104 1094027 1 C A - ReadM SNP 0027.scaffold00104 1094079 1 A T - ReadM SNP 0027.scaffold00104 1094371 1 T C - ReadM SNP 0027.scaffold00104 1094475 1 T A - ReadM SNP 0027.scaffold00104 1094953 1 T A - ReadM SNP 0027.scaffold00104 1094967 1 C T - ReadM SNP 0027.scaffold00104 1095441 1 C T - ReadM SNP 0027.scaffold00104 1095474 1 G A - ReadM SNP 0027.scaffold00104 1095533 1 A C - ReadM SNP 0027.scaffold00104 1095774 1 A G - ReadM SNP 0027.scaffold00104 1098124 1 T C - ScafM SNP 0027.scaffold00104 1098186 1 A G scaffold3570 ScafM SNP 0027.scaffold00104 1098212 1 A C scaffold3570 ScafM SNP 0027.scaffold00104 1098263 1 A G scaffold3570 ScafM INDEL 0027.scaffold00104 1098346 1 T . scaffold3570 ScafM SNP 0027.scaffold00104 1098354 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1098367 1 T A scaffold3570 ScafM SNP 0027.scaffold00104 1098373 1 G T scaffold3570 Both SNP 0027.scaffold00104 1098532 1 C A scaffold3570 Both SNP 0027.scaffold00104 1098566 1 C T scaffold3570 Both SNP 0027.scaffold00104 1098572 1 G A scaffold3570 Both SNP 0027.scaffold00104 1098743 1 C A scaffold3570 ScafM INDEL 0027.scaffold00104 1098818 43 ........................................... GAATTCATCAAACTAGTATAACTTTTCTGGATCAAAAATTCGA scaffold3570 ScafM INDEL 0027.scaffold00104 1098819 3 ... CCG scaffold3570 ScafM INDEL 0027.scaffold00104 1099021 1 C . scaffold3570 ScafM INDEL 0027.scaffold00104 1099139 1 A . scaffold3570 ScafM SNP 0027.scaffold00104 1099160 1 C T scaffold3570 ScafM SNP 0027.scaffold00104 1099185 1 C A scaffold3570 ScafM SNP 0027.scaffold00104 1099407 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1099414 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1099792 1 A G scaffold3570 ScafM SNP 0027.scaffold00104 1099816 1 C A scaffold3570 ScafM SNP 0027.scaffold00104 1099818 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1099827 1 G A scaffold3570 ScafM SNP 0027.scaffold00104 1099952 1 A G scaffold3570 ScafM SNP 0027.scaffold00104 1100020 1 G T scaffold3570 ScafM INDEL 0027.scaffold00104 1100042 2 TT .. scaffold3570 ScafM SNP 0027.scaffold00104 1100114 1 A T scaffold3570 ReadM SNP 0027.scaffold00104 1100637 1 A G - ReadM SNP 0027.scaffold00104 1101316 1 G A - ReadM SNP 0027.scaffold00104 1101389 1 C T - ReadM SNP 0027.scaffold00104 1101404 1 T C - ReadM SNP 0027.scaffold00104 1101477 1 C T - ReadM SNP 0027.scaffold00104 1101637 1 A G - ReadM SNP 0027.scaffold00104 1101690 1 C G - ReadM SNP 0027.scaffold00104 1101827 1 G T - ReadM SNP 0027.scaffold00104 1101850 1 T G - ReadM SNP 0027.scaffold00104 1102361 1 T G - ReadM SNP 0027.scaffold00104 1105181 1 C T - ReadM SNP 0027.scaffold00104 1105236 1 A T - ReadM SNP 0027.scaffold00104 1105407 1 A C - ReadM SNP 0027.scaffold00104 1105973 1 C T - ReadM SNP 0027.scaffold00104 1106417 1 A T - ReadM SNP 0027.scaffold00104 1106616 1 G C - ReadM SNP 0027.scaffold00104 1106940 1 A T - ReadM SNP 0027.scaffold00104 1107025 1 T A - ReadM SNP 0027.scaffold00104 1107030 1 G A - ReadM INDEL 0027.scaffold00104 1107152 1 C . - ReadM SNP 0027.scaffold00104 1107464 1 C A - ReadM SNP 0027.scaffold00104 1107500 1 T C - ReadM SNP 0027.scaffold00104 1107722 1 C T - ReadM SNP 0027.scaffold00104 1107817 1 C T - ReadM SNP 0027.scaffold00104 1107820 1 G A - ScafM SNP 0027.scaffold00104 1111480 1 T A scaffold23902 ScafM SNP 0027.scaffold00104 1111552 1 C T scaffold23902 ScafM SNP 0027.scaffold00104 1111575 1 A G scaffold23902 ScafM SNP 0027.scaffold00104 1112186 1 A T scaffold29589 ScafM SNP 0027.scaffold00104 1112328 1 C A scaffold29589 ScafM INDEL 0027.scaffold00104 1112336 5 ..... CTTGT scaffold29589 ScafM SNP 0027.scaffold00104 1112517 1 C A scaffold29589 ScafM SNP 0027.scaffold00104 1112685 2 CA TT scaffold29589 Both SNP 0027.scaffold00104 1113020 1 T C scaffold29589 ScafM SNP 0027.scaffold00104 1113229 1 A C scaffold29589 ScafM SNP 0027.scaffold00104 1113269 1 G A scaffold29589 ReadM SNP 0027.scaffold00104 1156504 1 A G - ReadM SNP 0027.scaffold00104 1156540 1 A G - Both SNP 0027.scaffold00104 1156553 1 A T scaffold3201 ReadM SNP 0027.scaffold00104 1156787 1 T C - ReadM SNP 0027.scaffold00104 1157030 1 C T - ReadM SNP 0027.scaffold00104 1157149 1 T A - ReadM SNP 0027.scaffold00104 1157242 1 A G - ReadM SNP 0027.scaffold00104 1157457 1 T C - ReadM SNP 0027.scaffold00104 1157546 1 T A - ReadM SNP 0027.scaffold00104 1157731 1 T C - ReadM SNP 0027.scaffold00104 1158186 1 A G - Both SNP 0027.scaffold00104 1158298 1 G A scaffold3201 ReadM SNP 0027.scaffold00104 1158541 1 C T - ReadM SNP 0027.scaffold00104 1158581 1 A G - ReadM SNP 0027.scaffold00104 1158593 1 G A - ReadM SNP 0027.scaffold00104 1158943 1 A C - ReadM SNP 0027.scaffold00104 1158965 1 C T - ReadM SNP 0027.scaffold00104 1159178 1 C T - ReadM SNP 0027.scaffold00104 1159397 1 A T - ReadM SNP 0027.scaffold00104 1159433 1 T C - ReadM SNP 0027.scaffold00104 1159534 1 T A - ReadM SNP 0027.scaffold00104 1159784 1 T C - ReadM SNP 0027.scaffold00104 1160430 1 C T - ReadM SNP 0027.scaffold00104 1160528 1 G A - ReadM SNP 0027.scaffold00104 1160887 1 A T - ReadM SNP 0027.scaffold00104 1161029 1 A G - ReadM SNP 0027.scaffold00104 1161142 1 C T - ReadM SNP 0027.scaffold00104 1162168 1 G A - ReadM SNP 0027.scaffold00104 1162200 1 C T - ReadM SNP 0027.scaffold00104 1162245 1 G C - ReadM SNP 0027.scaffold00104 1163621 1 G A - ReadM INDEL 0027.scaffold00104 1163705 1 T . - ReadM SNP 0027.scaffold00104 1163773 1 C T - ReadM SNP 0027.scaffold00104 1163907 1 T C - ReadM SNP 0027.scaffold00104 1165222 1 A G - ReadM SNP 0027.scaffold00104 1165240 1 G T - ReadM SNP 0027.scaffold00104 1165254 1 A C - ReadM SNP 0027.scaffold00104 1165285 1 G A - ReadM SNP 0027.scaffold00104 1165702 1 G T - ReadM SNP 0027.scaffold00104 1165781 1 C A - ReadM SNP 0027.scaffold00104 1166346 1 C T - ReadM SNP 0027.scaffold00104 1166825 1 T G - ReadM SNP 0027.scaffold00104 1167017 1 C A - ReadM SNP 0027.scaffold00104 1169923 1 T A - ScafM SNP 0027.scaffold00104 1171522 1 G A scaffold3201 ReadM SNP 0027.scaffold00104 1171719 1 A G - ReadM SNP 0027.scaffold00104 1171819 1 C A - ReadM SNP 0027.scaffold00104 1171923 1 A T - ReadM SNP 0027.scaffold00104 1171986 1 C T - ReadM SNP 0027.scaffold00104 1173047 1 G A - Both SNP 0027.scaffold00104 1173353 1 A G scaffold3201 Both SNP 0027.scaffold00104 1173489 1 C A scaffold3201 Both SNP 0027.scaffold00104 1173593 1 T C scaffold3201 Both SNP 0027.scaffold00104 1173774 1 C A scaffold3201 Both INDEL 0027.scaffold00104 1173776 1 T . scaffold3201 ReadM SNP 0027.scaffold00104 1173957 1 T C - ReadM SNP 0027.scaffold00104 1173976 1 C T - Both SNP 0027.scaffold00104 1174839 1 G C scaffold3201 ScafM SNP 0027.scaffold00104 1175014 1 C T scaffold3201 ScafM INDEL 0027.scaffold00104 1175212 2 .. CA scaffold3201 ScafM SNP 0027.scaffold00104 1175214 2 TT AA scaffold3201 ScafM SNP 0027.scaffold00104 1175217 1 C A scaffold3201 ReadM INDEL 0027.scaffold00104 1175471 1 A . - ReadM SNP 0027.scaffold00104 1175531 1 G T - ReadM INDEL 0027.scaffold00104 1175627 1 G . - ReadM SNP 0027.scaffold00104 1175641 1 A T - ReadM SNP 0027.scaffold00104 1175719 1 G A - ScafM SNP 0027.scaffold00104 1175940 1 C T scaffold3201 ScafM SNP 0027.scaffold00104 1176010 1 A G scaffold3201 ScafM INDEL 0027.scaffold00104 1176130 1 . A scaffold3201 ScafM INDEL 0027.scaffold00104 1176223 2 AT .. scaffold3201 ReadM SNP 0027.scaffold00104 1177016 1 C T - ReadM SNP 0027.scaffold00104 1177079 1 T G - ReadM SNP 0027.scaffold00104 1177421 1 T A - ReadM SNP 0027.scaffold00104 1177432 1 T C - ReadM SNP 0027.scaffold00104 1177465 1 A C - ReadM SNP 0027.scaffold00104 1177649 1 A T - ReadM SNP 0027.scaffold00104 1177685 1 T C - ReadM SNP 0027.scaffold00104 1179075 1 G A - ReadM SNP 0027.scaffold00104 1179189 1 C T - ReadM SNP 0027.scaffold00104 1179220 1 T C - ReadM SNP 0027.scaffold00104 1179363 1 C T - ReadM SNP 0027.scaffold00104 1179531 1 A C - ReadM SNP 0027.scaffold00104 1179734 1 A C - ReadM SNP 0027.scaffold00104 1179797 1 C A - ReadM SNP 0027.scaffold00104 1179898 1 A G - ReadM SNP 0027.scaffold00104 1179979 1 T G - ReadM SNP 0027.scaffold00104 1180278 1 C T - ReadM SNP 0027.scaffold00104 1180424 1 T A - ReadM SNP 0027.scaffold00104 1180435 1 G A - ReadM SNP 0027.scaffold00104 1180640 1 C T - ReadM SNP 0027.scaffold00104 1180778 1 A G - ReadM SNP 0027.scaffold00104 1180943 1 A T - Both SNP 0027.scaffold00104 1181027 2 TT CC scaffold3201 ReadM SNP 0027.scaffold00104 1181101 1 T C - Both SNP 0027.scaffold00104 1181176 1 C T scaffold3201 Both INDEL 0027.scaffold00104 1181242 1 . T scaffold3201 ScafM SNP 0027.scaffold00104 1181261 1 G C scaffold3201 ScafM INDEL 0027.scaffold00104 1181270 1 . A scaffold3201 ScafM SNP 0027.scaffold00104 1181272 1 C A scaffold3201 ScafM SNP 0027.scaffold00104 1181276 1 G A scaffold3201 ScafM SNP 0027.scaffold00104 1181278 1 A G scaffold3201 ReadM SNP 0027.scaffold00104 1181468 1 G A - ScafM INDEL 0027.scaffold00104 1181619 21 ..................... GAGTGTGTTTGTGGTGGAGGG scaffold3201 Both SNP 0027.scaffold00104 1181653 1 C G scaffold3201 Both SNP 0027.scaffold00104 1182126 1 C T scaffold3201 Both SNP 0027.scaffold00104 1182317 1 A G scaffold3201 Both INDEL 0027.scaffold00104 1182341 1 T . scaffold3201 Both SNP 0027.scaffold00104 1182475 1 T A scaffold3201 Both SNP 0027.scaffold00104 1182511 1 G T scaffold3201 Both SNP 0027.scaffold00104 1182546 1 G C scaffold3201 Both SNP 0027.scaffold00104 1182574 1 A C scaffold3201 ReadM SNP 0027.scaffold00104 1182717 1 G A - ReadM INDEL 0027.scaffold00104 1182758 1 T . - ReadM SNP 0027.scaffold00104 1182777 1 A G - ReadM SNP 0027.scaffold00104 1183317 1 C T - ReadM SNP 0027.scaffold00104 1183323 1 G T - ReadM SNP 0027.scaffold00104 1183712 1 T C - ReadM INDEL 0027.scaffold00104 1183854 1 . G - ReadM SNP 0027.scaffold00104 1184454 1 T C - ReadM SNP 0027.scaffold00104 1184919 1 A G - ReadM SNP 0027.scaffold00104 1185055 1 G A - ReadM SNP 0027.scaffold00104 1185096 1 C G - ReadM INDEL 0027.scaffold00104 1185213 1 . T - ReadM SNP 0027.scaffold00104 1185226 1 G A - ReadM SNP 0027.scaffold00104 1185479 1 T C - ReadM SNP 0027.scaffold00104 1185900 1 A C - ReadM SNP 0027.scaffold00104 1186107 1 G T - ReadM SNP 0027.scaffold00104 1186176 1 T G - ReadM SNP 0027.scaffold00104 1186208 1 T C - ReadM SNP 0027.scaffold00104 1186308 1 G A - ReadM SNP 0027.scaffold00104 1186438 1 G A - ReadM SNP 0027.scaffold00104 1186461 1 A G - ReadM SNP 0027.scaffold00104 1186546 1 C T - ReadM SNP 0027.scaffold00104 1186726 1 G A - ReadM INDEL 0027.scaffold00104 1186920 3 ... AAA - ReadM SNP 0027.scaffold00104 1187265 1 A G - ReadM SNP 0027.scaffold00104 1187334 1 G A - ReadM SNP 0027.scaffold00104 1187545 1 C T - ReadM SNP 0027.scaffold00104 1187605 1 A G - ReadM SNP 0027.scaffold00104 1187755 1 T G - ReadM SNP 0027.scaffold00104 1187766 1 A G - ReadM SNP 0027.scaffold00104 1187981 1 C T - ReadM SNP 0027.scaffold00104 1188286 1 T C - ReadM SNP 0027.scaffold00104 1188480 1 A T - Both INDEL 0027.scaffold00104 1188750 1 . A scaffold3201 ReadM SNP 0027.scaffold00104 1189143 1 A G - ReadM SNP 0027.scaffold00104 1189290 1 G A - ReadM SNP 0027.scaffold00104 1189810 1 T A - ReadM SNP 0027.scaffold00104 1190364 1 A G - ReadM SNP 0027.scaffold00104 1190962 1 G A - ReadM SNP 0027.scaffold00104 1191000 1 T C - ReadM INDEL 0027.scaffold00104 1191201 1 C . - ReadM SNP 0027.scaffold00104 1191232 1 A G - ReadM SNP 0027.scaffold00104 1191594 2 GG AA - ReadM SNP 0027.scaffold00104 1191724 1 A G - Both SNP 0027.scaffold00104 1191957 1 G A scaffold3201 Both SNP 0027.scaffold00104 1192275 1 A C scaffold3201 Both SNP 0027.scaffold00104 1192312 1 C T scaffold3201 Both SNP 0027.scaffold00104 1192352 1 G A scaffold3201 ReadM SNP 0027.scaffold00104 1192448 1 T G - ReadM SNP 0027.scaffold00104 1192575 1 T C - ReadM SNP 0027.scaffold00104 1192629 1 G A - Both SNP 0027.scaffold00104 1192817 1 G A scaffold3201 Both SNP 0027.scaffold00104 1192840 1 G A scaffold3201 Both SNP 0027.scaffold00104 1192962 1 G A scaffold3201 Both SNP 0027.scaffold00104 1192971 1 G A scaffold3201 Both SNP 0027.scaffold00104 1192976 1 A G scaffold3201 ReadM SNP 0027.scaffold00104 1193167 1 C T - ReadM SNP 0027.scaffold00104 1193229 1 A G - ReadM SNP 0027.scaffold00104 1193252 1 G A - ReadM SNP 0027.scaffold00104 1193380 1 T G - ReadM SNP 0027.scaffold00104 1193404 1 A G - ReadM SNP 0027.scaffold00104 1193409 1 T A - ReadM SNP 0027.scaffold00104 1193466 1 C T - ReadM SNP 0027.scaffold00104 1193509 1 C T - Both SNP 0027.scaffold00104 1193918 1 A C scaffold3201 Both SNP 0027.scaffold00104 1193935 1 A G scaffold3201 Both SNP 0027.scaffold00104 1194018 1 C T scaffold3201 ReadM SNP 0027.scaffold00104 1194119 1 A G - ReadM SNP 0027.scaffold00104 1194143 1 A G - ReadM SNP 0027.scaffold00104 1194163 1 C A - ReadM SNP 0027.scaffold00104 1194231 1 G A - ReadM SNP 0027.scaffold00104 1194269 1 G A - ReadM SNP 0027.scaffold00104 1194295 1 G A - ReadM SNP 0027.scaffold00104 1194336 1 C T - ReadM SNP 0027.scaffold00104 1194479 1 C T - ReadM SNP 0027.scaffold00104 1194485 1 G A - ReadM SNP 0027.scaffold00104 1194590 1 C A - ReadM SNP 0027.scaffold00104 1194652 1 T C - ReadM SNP 0027.scaffold00104 1194963 1 C T - ReadM SNP 0027.scaffold00104 1194971 1 A G - ReadM SNP 0027.scaffold00104 1194974 1 T G - ReadM SNP 0027.scaffold00104 1195032 1 T C - ReadM SNP 0027.scaffold00104 1195049 1 G A - ReadM SNP 0027.scaffold00104 1195158 1 G C - ReadM SNP 0027.scaffold00104 1195264 1 T C - ReadM SNP 0027.scaffold00104 1195286 1 T C - ReadM SNP 0027.scaffold00104 1195328 1 A C - ReadM SNP 0027.scaffold00104 1195405 1 C T - ReadM SNP 0027.scaffold00104 1195536 1 C A - Both SNP 0027.scaffold00104 1195616 1 G C scaffold3201 Both SNP 0027.scaffold00104 1195647 1 C G scaffold3201 Both SNP 0027.scaffold00104 1195744 1 C T scaffold3201 Both SNP 0027.scaffold00104 1195773 1 G C scaffold3201 ReadM SNP 0027.scaffold00104 1195815 1 A G - ReadM SNP 0027.scaffold00104 1195865 1 T C - ReadM SNP 0027.scaffold00104 1196106 1 A G - ReadM SNP 0027.scaffold00104 1196326 1 A G - ReadM SNP 0027.scaffold00104 1196345 1 T C - ReadM SNP 0027.scaffold00104 1196488 1 C A - ReadM SNP 0027.scaffold00104 1196674 1 A G - ReadM SNP 0027.scaffold00104 1196981 1 A G - ReadM SNP 0027.scaffold00104 1197019 1 A G - ReadM SNP 0027.scaffold00104 1197029 1 T C - ReadM SNP 0027.scaffold00104 1197130 1 A G - ReadM SNP 0027.scaffold00104 1197279 1 T C - ReadM SNP 0027.scaffold00104 1197319 1 A G - Both SNP 0027.scaffold00104 1197370 1 C A scaffold3201 ReadM SNP 0027.scaffold00104 1197482 1 G T - ReadM INDEL 0027.scaffold00104 1197656 2 AA .. - ReadM SNP 0027.scaffold00104 1197761 1 T G - ReadM SNP 0027.scaffold00104 1197783 1 C G - ReadM SNP 0027.scaffold00104 1197789 1 A G - ReadM SNP 0027.scaffold00104 1197968 1 C A - ReadM SNP 0027.scaffold00104 1198038 1 C T - ReadM INDEL 0027.scaffold00104 1199563 1 . T - ReadM SNP 0027.scaffold00104 1199859 1 G A - ReadM SNP 0027.scaffold00104 1199986 1 G T - ReadM SNP 0027.scaffold00104 1200005 1 A T - ReadM SNP 0027.scaffold00104 1200150 1 T A - ReadM SNP 0027.scaffold00104 1200203 1 C T - ReadM SNP 0027.scaffold00104 1200283 1 T C - ReadM SNP 0027.scaffold00104 1200289 1 A T - ReadM SNP 0027.scaffold00104 1200375 1 A C - Both SNP 0027.scaffold00104 1200695 1 A G scaffold3201 ReadM INDEL 0027.scaffold00104 1200814 1 T . - ReadM SNP 0027.scaffold00104 1200841 1 C T - ReadM SNP 0027.scaffold00104 1201377 1 G A - ReadM SNP 0027.scaffold00104 1201471 1 T A - ReadM SNP 0027.scaffold00104 1201683 1 C G - ReadM SNP 0027.scaffold00104 1201796 1 C A - ReadM SNP 0027.scaffold00104 1201811 1 A G - ReadM SNP 0027.scaffold00104 1201849 1 A G - ReadM SNP 0027.scaffold00104 1201905 1 C G - ReadM SNP 0027.scaffold00104 1201933 1 A G - ReadM SNP 0027.scaffold00104 1202250 1 A C - ReadM SNP 0027.scaffold00104 1202288 1 G T - ReadM SNP 0027.scaffold00104 1202312 1 G A - ScafM SNP 0027.scaffold00104 1202869 1 G A scaffold3201 ScafM SNP 0027.scaffold00104 1202961 1 T A scaffold3201 ScafM SNP 0027.scaffold00104 1203079 1 C T scaffold3201 ReadM SNP 0027.scaffold00104 1203200 1 A G - ReadM SNP 0027.scaffold00104 1203244 1 C T - ReadM SNP 0027.scaffold00104 1203581 1 T C - ReadM SNP 0027.scaffold00104 1203677 1 G T - Both SNP 0027.scaffold00104 1203966 1 A C scaffold3201 ScafM SNP 0027.scaffold00104 1203983 1 A T scaffold3201 ScafM INDEL 0027.scaffold00104 1204074 4 .... TATA scaffold3201 ScafM INDEL 0027.scaffold00104 1204177 1 . T scaffold3201 ReadM INDEL 0027.scaffold00104 1204218 1 . A - Both INDEL 0027.scaffold00104 1204312 1 C . scaffold3201 ScafM SNP 0027.scaffold00104 1204392 1 C T scaffold3201 ScafM SNP 0027.scaffold00104 1204634 1 C G scaffold3201 ScafM INDEL 0027.scaffold00104 1204754 1 . T scaffold3201 Both SNP 0027.scaffold00104 1205462 1 C T scaffold3201 Both SNP 0027.scaffold00104 1205532 1 C T scaffold3201 Both SNP 0027.scaffold00104 1205588 1 A G scaffold3201 ScafM INDEL 0027.scaffold00104 1205668 3 ... TTT scaffold3201 Both SNP 0027.scaffold00104 1205728 1 G C scaffold3201 Both INDEL 0027.scaffold00104 1205758 1 . T scaffold3201 Both SNP 0027.scaffold00104 1205918 1 C G scaffold3201 ReadM SNP 0027.scaffold00104 1206441 1 A C - Both INDEL 0027.scaffold00104 1206654 1 C . scaffold3201 Both SNP 0027.scaffold00104 1206724 1 G C scaffold3201 Both INDEL 0027.scaffold00104 1206780 2 .. CT scaffold3201 Both SNP 0027.scaffold00104 1207112 1 A G scaffold3201 Both SNP 0027.scaffold00104 1207170 1 G A scaffold3201 Both SNP 0027.scaffold00104 1207323 1 G T scaffold3201 Both SNP 0027.scaffold00104 1207517 1 G T scaffold3201 Both SNP 0027.scaffold00104 1207535 1 A G scaffold3201 ScafM SNP 0027.scaffold00104 1207624 1 G A scaffold3201 Both SNP 0027.scaffold00104 1207898 1 C A scaffold3201 Both SNP 0027.scaffold00104 1207931 1 T G scaffold3201 Both SNP 0027.scaffold00104 1209081 1 C T scaffold3201 ScafM INDEL 0027.scaffold00104 1209214 24 GCTGCACTCTTTTTTCTTCAAAAT ........................ scaffold3201 ReadM SNP 0027.scaffold00104 1209373 1 A G - ReadM SNP 0027.scaffold00104 1209380 1 G A - ReadM SNP 0027.scaffold00104 1210229 1 G C - ReadM SNP 0027.scaffold00104 1210422 1 C T - Both SNP 0027.scaffold00104 1210540 1 T C scaffold3201 ReadM SNP 0027.scaffold00104 1210584 1 T C - ReadM SNP 0027.scaffold00104 1210601 1 T C - ReadM SNP 0027.scaffold00104 1210662 1 A C - ScafM SNP 0027.scaffold00104 1212429 1 T A scaffold5131 Both SNP 0027.scaffold00104 1212977 1 A T scaffold5131 Both INDEL 0027.scaffold00104 1213037 1 T . scaffold5131 ReadM INDEL 0027.scaffold00104 1213037 1 . G - ScafM INDEL 0027.scaffold00104 1213153 5 ..... ACTCT scaffold5131 ScafM SNP 0027.scaffold00104 1213291 1 A G scaffold5131 ScafM SNP 0027.scaffold00104 1213738 1 G C scaffold5131 ScafM SNP 0027.scaffold00104 1213828 1 C G scaffold5131 ScafM INDEL 0027.scaffold00104 1214126 4 .... AAAC scaffold5131 ScafM INDEL 0027.scaffold00104 1214346 1 . C scaffold5131 ScafM SNP 0027.scaffold00104 1214426 2 TT CC scaffold5131 ScafM SNP 0027.scaffold00104 1214488 1 T A scaffold5131 ScafM SNP 0027.scaffold00104 1214501 1 A C scaffold5131 ScafM INDEL 0027.scaffold00104 1214697 1 G . scaffold5131 ScafM SNP 0027.scaffold00104 1214792 1 G T scaffold5131 ScafM INDEL 0027.scaffold00104 1214816 1 . A scaffold5131 ScafM SNP 0027.scaffold00104 1214829 1 C T scaffold5131 ScafM SNP 0027.scaffold00104 1214864 2 CT AC scaffold5131 ReadM SNP 0027.scaffold00104 1215016 1 A G - ScafM SNP 0027.scaffold00104 1215300 2 TC GT scaffold3201 ScafM INDEL 0027.scaffold00104 1215431 6 TAGTCT ...... scaffold3201 ScafM SNP 0027.scaffold00104 1216104 1 G C scaffold3201 ReadM SNP 0027.scaffold00104 1217175 1 T C - ReadM SNP 0027.scaffold00104 1217211 1 A G - ReadM SNP 0027.scaffold00104 1217235 1 T C - ReadM INDEL 0027.scaffold00104 1217340 2 TA .. - ReadM SNP 0027.scaffold00104 1217458 1 T C - ReadM SNP 0027.scaffold00104 1217504 1 A C - ReadM SNP 0027.scaffold00104 1217604 1 G A - ReadM SNP 0027.scaffold00104 1217792 1 T C - ReadM SNP 0027.scaffold00104 1218043 1 T C - ReadM SNP 0027.scaffold00104 1218534 1 G T - ReadM INDEL 0027.scaffold00104 1218642 1 A . - ReadM INDEL 0027.scaffold00104 1218967 2 TT .. - ReadM SNP 0027.scaffold00104 1219091 1 G T - Both SNP 0027.scaffold00104 1219400 1 A C scaffold3201 ReadM SNP 0027.scaffold00104 1219439 1 C A - ReadM SNP 0027.scaffold00104 1219508 1 A G - ReadM SNP 0027.scaffold00104 1219568 1 T C - ReadM SNP 0027.scaffold00104 1219586 1 G A - Both SNP 0027.scaffold00104 1219837 1 C T scaffold3201 ReadM SNP 0027.scaffold00104 1220317 1 C T - ReadM SNP 0027.scaffold00104 1220619 1 G T - ReadM SNP 0027.scaffold00104 1220819 1 C T - ReadM SNP 0027.scaffold00104 1221316 1 G A - ReadM SNP 0027.scaffold00104 1221354 1 T C - ReadM SNP 0027.scaffold00104 1221447 1 T C - ReadM SNP 0027.scaffold00104 1222461 1 A C - ReadM SNP 0027.scaffold00104 1222464 1 A G - ReadM SNP 0027.scaffold00104 1222579 1 C G - ReadM SNP 0027.scaffold00104 1222589 1 C T - ReadM SNP 0027.scaffold00104 1222741 1 G A - ReadM SNP 0027.scaffold00104 1222766 1 G A - ReadM SNP 0027.scaffold00104 1222801 1 T A - ReadM SNP 0027.scaffold00104 1222951 1 T C - ReadM SNP 0027.scaffold00104 1223071 1 G A - ReadM SNP 0027.scaffold00104 1223304 1 C T - ReadM SNP 0027.scaffold00104 1223343 1 T C - ReadM SNP 0027.scaffold00104 1223452 1 C T - ReadM SNP 0027.scaffold00104 1223508 1 C T - ReadM SNP 0027.scaffold00104 1223519 1 G T - ReadM SNP 0027.scaffold00104 1223706 1 C A - ReadM SNP 0027.scaffold00104 1223769 1 C T - ReadM INDEL 0027.scaffold00104 1223840 2 CC .. - ReadM SNP 0027.scaffold00104 1223985 1 C T - ReadM SNP 0027.scaffold00104 1224201 1 G A - ReadM SNP 0027.scaffold00104 1224390 1 A C - ReadM SNP 0027.scaffold00104 1224455 1 C T - ReadM SNP 0027.scaffold00104 1224700 1 C A - ReadM SNP 0027.scaffold00104 1224745 1 C T - ReadM SNP 0027.scaffold00104 1224783 1 G A - ReadM SNP 0027.scaffold00104 1224876 1 T C - ReadM INDEL 0027.scaffold00104 1225001 1 A . - ReadM SNP 0027.scaffold00104 1225089 1 C G - ReadM SNP 0027.scaffold00104 1225268 1 T C - ReadM SNP 0027.scaffold00104 1225488 1 G A - ReadM SNP 0027.scaffold00104 1225797 1 C T - ReadM SNP 0027.scaffold00104 1225811 1 A G - ReadM SNP 0027.scaffold00104 1225851 1 G A - ReadM SNP 0027.scaffold00104 1225897 1 C T - ReadM SNP 0027.scaffold00104 1226130 1 T C - ReadM SNP 0027.scaffold00104 1226150 1 T C - ReadM SNP 0027.scaffold00104 1226232 1 T A - ReadM SNP 0027.scaffold00104 1226353 1 G T - ReadM SNP 0027.scaffold00104 1226495 1 A G - ReadM SNP 0027.scaffold00104 1226499 1 T G - ReadM SNP 0027.scaffold00104 1226606 1 A G - ReadM SNP 0027.scaffold00104 1226686 1 A G - ReadM SNP 0027.scaffold00104 1226768 1 A C - ReadM SNP 0027.scaffold00104 1226900 1 A G - ReadM SNP 0027.scaffold00104 1227231 1 C A - ReadM SNP 0027.scaffold00104 1227527 1 A G - ReadM SNP 0027.scaffold00104 1227615 1 A G - ReadM SNP 0027.scaffold00104 1227811 1 T C - ReadM SNP 0027.scaffold00104 1227889 1 C A - ReadM INDEL 0027.scaffold00104 1228285 1 . T - ReadM SNP 0027.scaffold00104 1228312 1 G A - ReadM SNP 0027.scaffold00104 1228480 1 G A - ReadM SNP 0027.scaffold00104 1228760 1 T C - ReadM SNP 0027.scaffold00104 1228799 1 G A - ReadM SNP 0027.scaffold00104 1228809 1 G T - ReadM SNP 0027.scaffold00104 1229217 1 A G - ReadM SNP 0027.scaffold00104 1229312 1 A G - ReadM SNP 0027.scaffold00104 1229440 1 T C - ReadM SNP 0027.scaffold00104 1229481 1 G A - ReadM SNP 0027.scaffold00104 1229837 1 G A - ReadM SNP 0027.scaffold00104 1230104 1 C T - ReadM SNP 0027.scaffold00104 1230108 1 G T - ReadM INDEL 0027.scaffold00104 1230253 1 T . - ReadM SNP 0027.scaffold00104 1230259 1 C A - ReadM SNP 0027.scaffold00104 1230323 1 A T - Both SNP 0027.scaffold00104 1231315 1 G A scaffold2927 ReadM SNP 0027.scaffold00104 1231918 1 T A - Both SNP 0027.scaffold00104 1233073 1 A G scaffold2927 ReadM SNP 0027.scaffold00104 1233878 1 C T - ReadM SNP 0027.scaffold00104 1233932 1 A G - ScafM INDEL 0027.scaffold00104 1234435 2 .. TT scaffold2927 ScafM SNP 0027.scaffold00104 1234583 1 C G scaffold2927 ScafM SNP 0027.scaffold00104 1234655 1 C G scaffold2927 ReadM SNP 0027.scaffold00104 1235038 1 A T - ReadM SNP 0027.scaffold00104 1235675 1 T A - ReadM SNP 0027.scaffold00104 1235714 1 A G - ReadM SNP 0027.scaffold00104 1235745 1 A G - Both SNP 0027.scaffold00104 1236036 1 G A scaffold2927 ReadM SNP 0027.scaffold00104 1236182 1 G A - ReadM SNP 0027.scaffold00104 1236610 1 C T - ReadM SNP 0027.scaffold00104 1236986 1 G A - ReadM SNP 0027.scaffold00104 1237142 1 A G - ReadM SNP 0027.scaffold00104 1237241 1 G A - ScafM SNP 0027.scaffold00104 1237608 1 A T scaffold6932 Both SNP 0027.scaffold00104 1238078 1 T C scaffold6932 ScafM SNP 0027.scaffold00104 1238156 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1238480 1 T A scaffold6932 ScafM SNP 0027.scaffold00104 1238627 1 G A scaffold6932 ScafM INDEL 0027.scaffold00104 1238677 1 . T scaffold6932 ScafM SNP 0027.scaffold00104 1238736 1 T C scaffold6932 ScafM INDEL 0027.scaffold00104 1239076 3 ... TCA scaffold6932 ScafM SNP 0027.scaffold00104 1239458 1 T G scaffold6932 ScafM SNP 0027.scaffold00104 1239512 1 C T scaffold6932 ScafM SNP 0027.scaffold00104 1239518 1 A T scaffold6932 ScafM INDEL 0027.scaffold00104 1239536 1 A . scaffold6932 ScafM SNP 0027.scaffold00104 1239550 1 A T scaffold6932 ScafM INDEL 0027.scaffold00104 1239551 2 .. TT scaffold6932 ScafM SNP 0027.scaffold00104 1239559 1 A T scaffold6932 ScafM SNP 0027.scaffold00104 1239572 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1239577 1 T C scaffold6932 ScafM SNP 0027.scaffold00104 1239586 1 G A scaffold6932 ScafM INDEL 0027.scaffold00104 1239750 1 . T scaffold6932 Both SNP 0027.scaffold00104 1242019 1 T A scaffold6932 Both SNP 0027.scaffold00104 1243567 1 C T scaffold6932 ReadM INDEL 0027.scaffold00104 1243704 1 . T - ReadM SNP 0027.scaffold00104 1244481 1 C G - ReadM SNP 0027.scaffold00104 1244619 1 T G - ReadM SNP 0027.scaffold00104 1244751 1 T C - ReadM INDEL 0027.scaffold00104 1244808 1 . A - ReadM SNP 0027.scaffold00104 1244887 1 A T - ReadM SNP 0027.scaffold00104 1245090 1 G A - ReadM SNP 0027.scaffold00104 1246208 1 C T - Both SNP 0027.scaffold00104 1246636 1 C T scaffold6932 Both SNP 0027.scaffold00104 1246751 1 C T scaffold6932 Both SNP 0027.scaffold00104 1246778 1 C A scaffold6932 Both SNP 0027.scaffold00104 1246793 1 A T scaffold6932 Both SNP 0027.scaffold00104 1246867 1 G A scaffold6932 ScafM INDEL 0027.scaffold00104 1247413 14 TTCTGTTCAGATCT .............. scaffold6932 ScafM SNP 0027.scaffold00104 1247588 1 G A scaffold6932 ScafM INDEL 0027.scaffold00104 1247701 1 . T scaffold6932 ScafM INDEL 0027.scaffold00104 1248917 1 . T scaffold6932 ScafM SNP 0027.scaffold00104 1248924 1 G A scaffold6932 ScafM SNP 0027.scaffold00104 1249113 1 G A scaffold6932 Both INDEL 0027.scaffold00104 1249367 1 T . scaffold6932 ScafM INDEL 0027.scaffold00104 1249437 2 .. TT scaffold6932 ScafM INDEL 0027.scaffold00104 1249488 11 ........... TATATTATTTG scaffold6932 ScafM INDEL 0027.scaffold00104 1249490 13 ............. GGTGATAATAGTG scaffold6932 ScafM INDEL 0027.scaffold00104 1249493 5 ..... TGTTT scaffold6932 ScafM SNP 0027.scaffold00104 1249508 1 G A scaffold6932 ScafM SNP 0027.scaffold00104 1249657 1 G T scaffold6932 Both SNP 0027.scaffold00104 1249789 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1249801 1 C T scaffold6932 ScafM INDEL 0027.scaffold00104 1249899 11 ........... AGTGAATTGCG scaffold6932 ScafM SNP 0027.scaffold00104 1249953 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1249962 1 G C scaffold6932 ScafM SNP 0027.scaffold00104 1250011 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1250014 1 A G scaffold6932 ScafM INDEL 0027.scaffold00104 1250024 8 ATAAAAAA ........ scaffold6932 ScafM SNP 0027.scaffold00104 1250040 1 A T scaffold6932 ScafM SNP 0027.scaffold00104 1250043 1 C G scaffold6932 ScafM SNP 0027.scaffold00104 1250051 1 G C scaffold6932 ScafM SNP 0027.scaffold00104 1250054 2 TG CC scaffold6932 ScafM SNP 0027.scaffold00104 1250095 1 C A scaffold6932 ScafM SNP 0027.scaffold00104 1250162 1 A G scaffold6932 ScafM SNP 0027.scaffold00104 1250324 1 A G scaffold6932 Both INDEL 0027.scaffold00104 1251103 1 T . scaffold6932 Both SNP 0027.scaffold00104 1251733 1 A T scaffold6932 Both SNP 0027.scaffold00104 1251878 1 G T scaffold6932 Both SNP 0027.scaffold00104 1251958 1 C G scaffold6932 ScafM INDEL 0027.scaffold00104 1252227 16 ................ ATTACTCAAGTTGAAG scaffold6932 ScafM SNP 0027.scaffold00104 1252290 1 T C scaffold6932 Both SNP 0027.scaffold00104 1252625 1 A G scaffold6932 Both SNP 0027.scaffold00104 1252627 1 A T scaffold6932 ScafM SNP 0027.scaffold00104 1253089 1 A C scaffold18901 ScafM SNP 0027.scaffold00104 1253096 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253115 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253139 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253148 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253156 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253183 1 T A scaffold18901 ScafM SNP 0027.scaffold00104 1253196 1 T G scaffold18901 ScafM INDEL 0027.scaffold00104 1253213 4 .... TTAT scaffold18901 ScafM INDEL 0027.scaffold00104 1253214 1 . T scaffold18901 ScafM INDEL 0027.scaffold00104 1253217 3 ... GGG scaffold18901 ScafM INDEL 0027.scaffold00104 1253218 1 . A scaffold18901 ScafM SNP 0027.scaffold00104 1253232 1 A T scaffold18901 ScafM SNP 0027.scaffold00104 1253238 1 A T scaffold18901 ScafM SNP 0027.scaffold00104 1253255 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253283 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253290 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253295 1 A C scaffold18901 ScafM SNP 0027.scaffold00104 1253305 1 G T scaffold18901 ScafM SNP 0027.scaffold00104 1253309 1 C G scaffold18901 ScafM SNP 0027.scaffold00104 1253326 2 GC AT scaffold18901 ScafM SNP 0027.scaffold00104 1253342 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253349 1 A T scaffold18901 ScafM SNP 0027.scaffold00104 1253374 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253376 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253382 1 T A scaffold18901 ScafM SNP 0027.scaffold00104 1253420 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253423 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253445 1 G T scaffold18901 ScafM SNP 0027.scaffold00104 1253453 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253466 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253480 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253499 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253502 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253508 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253516 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253531 1 T A scaffold18901 ScafM SNP 0027.scaffold00104 1253535 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253538 1 A C scaffold18901 ScafM SNP 0027.scaffold00104 1253551 2 AG CT scaffold18901 ScafM INDEL 0027.scaffold00104 1253599 1 A . scaffold18901 ScafM SNP 0027.scaffold00104 1253655 1 T A scaffold18901 ScafM SNP 0027.scaffold00104 1253665 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253693 1 G C scaffold18901 ScafM SNP 0027.scaffold00104 1253706 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253715 1 C A scaffold18901 ScafM SNP 0027.scaffold00104 1253728 1 A G scaffold18901 ScafM SNP 0027.scaffold00104 1253740 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253758 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253760 2 GA AC scaffold18901 ScafM SNP 0027.scaffold00104 1253768 2 CC TA scaffold18901 ScafM SNP 0027.scaffold00104 1253777 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253780 1 T C scaffold18901 ScafM SNP 0027.scaffold00104 1253807 1 C A scaffold18901 ScafM SNP 0027.scaffold00104 1253811 1 T A scaffold18901 ScafM SNP 0027.scaffold00104 1253826 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253835 1 A T scaffold18901 ScafM SNP 0027.scaffold00104 1253863 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253870 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253878 1 C T scaffold18901 ScafM SNP 0027.scaffold00104 1253882 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253895 1 G A scaffold18901 ScafM SNP 0027.scaffold00104 1253943 1 A T scaffold18901 ScafM SNP 0027.scaffold00104 1253947 1 A G scaffold18901 ScafM INDEL 0027.scaffold00104 1253951 1 A . scaffold18901 ScafM SNP 0027.scaffold00104 1253959 1 C T scaffold18901 ScafM INDEL 0027.scaffold00104 1253963 1 G . scaffold18901 ScafM SNP 0027.scaffold00104 1253984 1 C T scaffold18901 ReadM SNP 0027.scaffold00104 1256413 1 G A - ReadM SNP 0027.scaffold00104 1256513 1 C G - ReadM SNP 0027.scaffold00104 1256578 1 G A - Both SNP 0027.scaffold00104 1258132 1 T C scaffold6932 ReadM SNP 0027.scaffold00104 1258203 1 A G - ReadM SNP 0027.scaffold00104 1258332 1 G C - ReadM SNP 0027.scaffold00104 1258429 1 A G - ReadM INDEL 0027.scaffold00104 1258443 1 . T - ReadM SNP 0027.scaffold00104 1258929 1 T A - ReadM INDEL 0027.scaffold00104 1259115 1 A . - ReadM SNP 0027.scaffold00104 1259188 1 A G - ReadM SNP 0027.scaffold00104 1259207 1 A G - ReadM SNP 0027.scaffold00104 1259600 1 G A - ScafM SNP 0027.scaffold00104 1260398 1 A G scaffold18531 ScafM SNP 0027.scaffold00104 1260425 1 T C scaffold18531 ScafM SNP 0027.scaffold00104 1260643 1 C T scaffold18531 ScafM SNP 0027.scaffold00104 1260661 1 C A scaffold18531 ReadM SNP 0027.scaffold00104 1260860 1 T C - ReadM SNP 0027.scaffold00104 1260987 1 C G - ReadM SNP 0027.scaffold00104 1261042 1 C A - ScafM SNP 0027.scaffold00104 1261196 1 T A scaffold11864 ScafM SNP 0027.scaffold00104 1261206 1 A G scaffold11864 ScafM INDEL 0027.scaffold00104 1261280 1 . A scaffold11864 ScafM SNP 0027.scaffold00104 1263361 1 G A scaffold6932 ScafM SNP 0027.scaffold00104 1263445 1 A T scaffold6932 Both SNP 0027.scaffold00104 1263774 1 C T scaffold6932 ReadM SNP 0027.scaffold00104 1264430 1 A G - ReadM SNP 0027.scaffold00104 1264838 1 T C - ReadM SNP 0027.scaffold00104 1265340 1 T A - ReadM SNP 0027.scaffold00104 1265446 1 C G - ReadM SNP 0027.scaffold00104 1265775 1 G A - ReadM SNP 0027.scaffold00104 1265840 1 A G - ReadM SNP 0027.scaffold00104 1266004 1 T C - ReadM INDEL 0027.scaffold00104 1266181 1 . A - ReadM SNP 0027.scaffold00104 1266209 1 G A - ReadM SNP 0027.scaffold00104 1266518 1 G A - ReadM SNP 0027.scaffold00104 1266620 1 T A - ReadM SNP 0027.scaffold00104 1266632 1 A T - ReadM INDEL 0028.scaffold00107 2141 1 . T - ScafM SNP 0028.scaffold00107 11150 1 G C scaffold19214 ScafM SNP 0028.scaffold00107 15730 1 T C scaffold19214 ScafM SNP 0028.scaffold00107 15762 1 A T scaffold19214 ScafM INDEL 0028.scaffold00107 15785 1 . T scaffold19214 ScafM INDEL 0028.scaffold00107 15820 1 . A scaffold19214 ScafM SNP 0028.scaffold00107 15835 1 G A scaffold19214 ScafM SNP 0028.scaffold00107 15908 1 T A scaffold19214 ScafM SNP 0028.scaffold00107 19320 1 T C scaffold26272 ScafM INDEL 0028.scaffold00107 19367 1 . C scaffold26272 ScafM SNP 0028.scaffold00107 19386 1 T G scaffold26272 ScafM SNP 0028.scaffold00107 19398 1 A G scaffold26272 ScafM SNP 0028.scaffold00107 19405 1 T A scaffold26272 ScafM SNP 0028.scaffold00107 19408 1 T G scaffold26272 ScafM SNP 0028.scaffold00107 19425 1 A G scaffold26272 ScafM SNP 0028.scaffold00107 28058 1 A T scaffold7529 ScafM SNP 0028.scaffold00107 33402 1 C T scaffold7529 ReadM SNP 0028.scaffold00107 40509 1 G T - ScafM SNP 0028.scaffold00107 51463 1 T C scaffold15944 ScafM SNP 0028.scaffold00107 51513 1 G C scaffold15944 ScafM INDEL 0028.scaffold00107 51560 11 TCGAAGGTAAT ........... scaffold15944 ScafM SNP 0028.scaffold00107 51596 1 C T scaffold15944 ScafM SNP 0028.scaffold00107 51679 2 TA CG scaffold15944 ScafM SNP 0028.scaffold00107 51858 1 A C scaffold15944 ScafM SNP 0028.scaffold00107 51863 1 G C scaffold15944 ScafM SNP 0028.scaffold00107 51883 1 C A scaffold15944 ScafM SNP 0028.scaffold00107 62448 1 T C scaffold4887 ScafM SNP 0028.scaffold00107 62813 1 G A scaffold4887 ScafM SNP 0028.scaffold00107 62828 1 C T scaffold4887 Both INDEL 0028.scaffold00107 73947 1 . T scaffold4887 ScafM SNP 0028.scaffold00107 75093 1 C T scaffold4887 ScafM SNP 0028.scaffold00107 75186 1 C T scaffold4887 ScafM SNP 0028.scaffold00107 75212 1 G A scaffold4887 ScafM INDEL 0028.scaffold00107 75236 1 . C scaffold4887 ScafM INDEL 0028.scaffold00107 76119 2 AA .. scaffold4887 ScafM SNP 0028.scaffold00107 76134 1 A G scaffold4887 ScafM SNP 0028.scaffold00107 76152 1 C T scaffold4887 ScafM SNP 0028.scaffold00107 76155 1 G A scaffold4887 ScafM SNP 0028.scaffold00107 76179 1 C T scaffold4887 ScafM INDEL 0028.scaffold00107 76182 1 . A scaffold4887 ScafM SNP 0028.scaffold00107 76612 1 G A scaffold4887 ScafM SNP 0028.scaffold00107 76643 1 C T scaffold6175 ScafM SNP 0028.scaffold00107 76646 1 T C scaffold6175 ScafM SNP 0028.scaffold00107 76724 1 C T scaffold6175 ScafM INDEL 0028.scaffold00107 76738 1 A . scaffold6175 ScafM SNP 0028.scaffold00107 76762 1 C A scaffold6175 ScafM INDEL 0028.scaffold00107 76803 3 TAT ... scaffold6175 ScafM SNP 0028.scaffold00107 76837 1 C T scaffold6175 ScafM SNP 0028.scaffold00107 76839 1 C G scaffold6175 ScafM SNP 0028.scaffold00107 76894 1 C G scaffold6175 ScafM SNP 0028.scaffold00107 76917 1 A C scaffold6175 ScafM SNP 0028.scaffold00107 76939 1 G T scaffold6175 ScafM INDEL 0028.scaffold00107 76946 16 ................ AGAAATATTTAGGCTA scaffold6175 ScafM SNP 0028.scaffold00107 76967 1 C A scaffold6175 ScafM INDEL 0028.scaffold00107 76986 1 . C scaffold6175 ScafM SNP 0028.scaffold00107 77001 1 G A scaffold6175 ScafM SNP 0028.scaffold00107 77028 1 C T scaffold6175 ScafM SNP 0028.scaffold00107 77036 1 T C scaffold6175 ScafM SNP 0028.scaffold00107 77044 1 G A scaffold6175 ScafM SNP 0028.scaffold00107 77062 1 G T scaffold6175 ScafM INDEL 0028.scaffold00107 77065 2 TT .. scaffold6175 ScafM SNP 0028.scaffold00107 77073 1 T C scaffold6175 ScafM SNP 0028.scaffold00107 77090 1 A G scaffold6175 ScafM SNP 0028.scaffold00107 77106 1 T G scaffold6175 ScafM SNP 0028.scaffold00107 77114 1 T A scaffold6175 ScafM SNP 0028.scaffold00107 77120 1 A G scaffold6175 ScafM INDEL 0028.scaffold00107 79751 1 T . scaffold4887 ScafM SNP 0028.scaffold00107 79766 1 A G scaffold4887 ScafM INDEL 0028.scaffold00107 79844 4 .... TTTG scaffold4887 ScafM SNP 0028.scaffold00107 80020 1 C G scaffold4887 ScafM SNP 0028.scaffold00107 86726 1 G C scaffold4887 ScafM INDEL 0028.scaffold00107 86732 14 GGGGGGGGGGGGTT .............. scaffold4887 ScafM INDEL 0028.scaffold00107 99238 1 . T scaffold4887 ScafM INDEL 0028.scaffold00107 110957 2 TT .. scaffold4887 ScafM INDEL 0028.scaffold00107 111568 2 GG .. scaffold4887 ScafM INDEL 0028.scaffold00107 116699 28 AACCAAGAAAAAAGGACTTGAGTGACAA ............................ scaffold4887 ReadM SNP 0028.scaffold00107 120215 1 T C - ReadM SNP 0028.scaffold00107 122208 1 A C - ScafM SNP 0028.scaffold00107 130720 1 A G scaffold4887 ReadM SNP 0028.scaffold00107 131189 1 G A - ScafM INDEL 0028.scaffold00107 138192 1 T . scaffold1451 ScafM SNP 0028.scaffold00107 138194 1 A G scaffold1451 ScafM SNP 0028.scaffold00107 138386 1 T C scaffold1490 ScafM SNP 0028.scaffold00107 138392 1 C G scaffold1490 ScafM SNP 0028.scaffold00107 138462 1 C G scaffold1490 ScafM SNP 0028.scaffold00107 138481 1 C T scaffold1490 ScafM SNP 0028.scaffold00107 138565 1 G A scaffold1490 ScafM SNP 0028.scaffold00107 138569 1 C T scaffold1490 ScafM SNP 0028.scaffold00107 138640 2 TT CC scaffold1490 ScafM INDEL 0028.scaffold00107 138647 1 A . scaffold1490 ScafM SNP 0028.scaffold00107 138649 1 A C scaffold1490 ScafM INDEL 0028.scaffold00107 143226 3 ... CTT scaffold1636 ScafM SNP 0028.scaffold00107 143228 1 C T scaffold1636 ScafM SNP 0028.scaffold00107 171513 1 G A scaffold1636 ScafM SNP 0028.scaffold00107 173487 1 C T scaffold169 ScafM SNP 0028.scaffold00107 173489 2 CG TT scaffold169 ScafM INDEL 0028.scaffold00107 173491 4 .GAA TTTT scaffold169 ScafM INDEL 0028.scaffold00107 173495 1 . G scaffold169 ScafM INDEL 0028.scaffold00107 173496 1 . C scaffold169 ScafM INDEL 0028.scaffold00107 173499 1 . G scaffold169 ScafM INDEL 0028.scaffold00107 173501 4 ..CC TTTT scaffold169 ScafM SNP 0028.scaffold00107 173507 4 CCTC GTAG scaffold169 ScafM INDEL 0028.scaffold00107 173512 3 ..C GGG scaffold169 ScafM SNP 0028.scaffold00107 173515 2 TT CC scaffold169 ScafM SNP 0028.scaffold00107 173530 1 T C scaffold169 ScafM SNP 0028.scaffold00107 173541 1 A C scaffold169 ScafM SNP 0028.scaffold00107 173543 1 G C scaffold169 ScafM INDEL 0028.scaffold00107 173546 4 GGGC .... scaffold169 ScafM SNP 0028.scaffold00107 173551 1 A G scaffold169 ScafM INDEL 0028.scaffold00107 173556 2 .. AG scaffold169 ScafM SNP 0028.scaffold00107 173601 1 T A scaffold169 ScafM SNP 0028.scaffold00107 173634 1 T C scaffold169 ScafM SNP 0028.scaffold00107 175072 1 C T scaffold1636 ScafM SNP 0028.scaffold00107 177424 1 A T scaffold14719 ScafM SNP 0028.scaffold00107 177493 1 A G scaffold14719 ScafM SNP 0028.scaffold00107 192200 1 A C scaffold12140 ScafM INDEL 0028.scaffold00107 199193 1 . T scaffold12140 ScafM INDEL 0028.scaffold00107 208726 1 . A scaffold12140 ScafM INDEL 0028.scaffold00107 220607 1 . T scaffold12140 ScafM INDEL 0028.scaffold00107 221289 1 A . scaffold12140 ScafM SNP 0028.scaffold00107 229048 1 A T scaffold12140 ScafM INDEL 0028.scaffold00107 265033 1 G . scaffold3826 ScafM SNP 0028.scaffold00107 297182 1 G A scaffold3826 ScafM SNP 0028.scaffold00107 297212 1 A G scaffold3826 ReadM INDEL 0028.scaffold00107 340475 1 T . - ScafM SNP 0028.scaffold00107 351988 1 A G scaffold4233 ScafM SNP 0028.scaffold00107 352009 1 C T scaffold4233 ScafM SNP 0028.scaffold00107 352017 1 T C scaffold4233 ScafM SNP 0028.scaffold00107 352036 1 C G scaffold4233 ScafM INDEL 0028.scaffold00107 352054 1 . C scaffold4233 ScafM SNP 0028.scaffold00107 352079 2 AC TT scaffold4233 ScafM INDEL 0028.scaffold00107 352087 1 . A scaffold4233 ReadM INDEL 0028.scaffold00107 352089 1 . T - ScafM INDEL 0028.scaffold00107 356433 1 . C scaffold4233 ScafM INDEL 0028.scaffold00107 356442 1 C . scaffold4233 ScafM INDEL 0028.scaffold00107 356450 1 . C scaffold4233 ScafM INDEL 0028.scaffold00107 356468 1 A . scaffold4233 ScafM SNP 0028.scaffold00107 356481 1 C A scaffold4233 ScafM INDEL 0028.scaffold00107 356489 1 . T scaffold4233 ScafM SNP 0028.scaffold00107 356496 1 A C scaffold4233 ScafM SNP 0028.scaffold00107 356498 1 C A scaffold4233 ScafM INDEL 0028.scaffold00107 356517 1 A . scaffold4233 ScafM INDEL 0028.scaffold00107 356520 2 GT .. scaffold4233 ReadM INDEL 0028.scaffold00107 369506 1 . T - ScafM INDEL 0028.scaffold00107 383766 35 TCTCTGGAAACAGATTGCTCTTTCTCCAACAACCC ................................... scaffold4233 ScafM INDEL 0028.scaffold00107 387748 2 GG .. scaffold4233 ScafM INDEL 0028.scaffold00107 388514 2 .. AA scaffold4233 ScafM SNP 0028.scaffold00107 389922 1 A C scaffold4233 ScafM INDEL 0028.scaffold00107 389925 2 CC .. scaffold4233 ScafM INDEL 0028.scaffold00107 389946 5 CCCCC ....A scaffold4233 ScafM SNP 0028.scaffold00107 405729 1 G A scaffold310 ScafM SNP 0028.scaffold00107 405753 1 C T scaffold310 ScafM SNP 0028.scaffold00107 405806 1 A C scaffold310 ScafM SNP 0028.scaffold00107 405879 1 T G scaffold310 ScafM SNP 0028.scaffold00107 405982 1 A G scaffold310 ScafM SNP 0028.scaffold00107 407127 1 G C scaffold4233 ScafM SNP 0028.scaffold00107 407135 1 G A scaffold4233 ScafM SNP 0028.scaffold00107 449379 1 T G scaffold6241 ScafM SNP 0028.scaffold00107 449381 1 G T scaffold6241 ScafM SNP 0028.scaffold00107 449389 1 A G scaffold6241 ScafM SNP 0028.scaffold00107 449392 1 T G scaffold6241 ScafM SNP 0028.scaffold00107 449414 1 G A scaffold6241 ScafM SNP 0028.scaffold00107 449423 1 A G scaffold6241 ScafM INDEL 0028.scaffold00107 449439 4 .... ATCT scaffold6241 ScafM SNP 0028.scaffold00107 449464 1 G T scaffold6241 ScafM INDEL 0028.scaffold00107 449474 2 GC .A scaffold6241 ScafM SNP 0028.scaffold00107 449502 1 G A scaffold6241 ScafM INDEL 0028.scaffold00107 449524 4 CTCC .... scaffold6241 ScafM SNP 0028.scaffold00107 449530 2 CC TA scaffold6241 ScafM SNP 0028.scaffold00107 449534 1 C T scaffold6241 ScafM SNP 0028.scaffold00107 449540 1 C A scaffold6241 ScafM INDEL 0028.scaffold00107 449542 1 C . scaffold6241 ScafM INDEL 0028.scaffold00107 449546 2 CC .. scaffold6241 ScafM INDEL 0028.scaffold00107 449549 2 CC .. scaffold6241 ScafM SNP 0028.scaffold00107 449560 1 A G scaffold6241 ScafM SNP 0028.scaffold00107 449580 3 CTA TCG scaffold6241 ScafM SNP 0028.scaffold00107 449623 1 G T scaffold6241 ScafM SNP 0028.scaffold00107 449635 1 G C scaffold6241 ScafM SNP 0028.scaffold00107 449643 1 G T scaffold6241 ScafM SNP 0028.scaffold00107 449647 1 C T scaffold6241 ScafM SNP 0028.scaffold00107 449743 1 G A scaffold6241 ScafM SNP 0028.scaffold00107 449756 2 CT AA scaffold6241 ScafM SNP 0028.scaffold00107 449761 1 C T scaffold6241 ScafM SNP 0028.scaffold00107 449764 1 T G scaffold6241 ScafM SNP 0028.scaffold00107 449783 1 C T scaffold6241 ScafM SNP 0028.scaffold00107 449789 1 T G scaffold6241 ScafM SNP 0028.scaffold00107 449807 1 C T scaffold6241 ScafM SNP 0028.scaffold00107 449825 1 G A scaffold6241 ScafM SNP 0028.scaffold00107 449834 1 A G scaffold6241 ScafM INDEL 0028.scaffold00107 475235 1 . A scaffold692 ScafM INDEL 0028.scaffold00107 476722 16 ................ AACTCTTTTTTTTGCT scaffold692 ScafM INDEL 0028.scaffold00107 477233 2 CA .. scaffold692 ScafM INDEL 0028.scaffold00107 477239 13 GGCCATTACATTG ............. scaffold692 ScafM INDEL 0028.scaffold00107 538407 1 T . scaffold692 ScafM INDEL 0028.scaffold00107 538432 1 T . scaffold692 ScafM INDEL 0028.scaffold00107 539905 1 . A scaffold692 ReadM INDEL 0028.scaffold00107 543983 1 A . - ScafM SNP 0028.scaffold00107 589564 1 T A scaffold127 ScafM SNP 0028.scaffold00107 589599 1 T C scaffold127 ScafM SNP 0028.scaffold00107 589616 2 GC AT scaffold127 ScafM SNP 0028.scaffold00107 589622 1 C T scaffold127 ScafM SNP 0028.scaffold00107 589629 1 G A scaffold127 ScafM SNP 0028.scaffold00107 589724 1 C G scaffold127 ScafM SNP 0028.scaffold00107 589745 1 A T scaffold127 ScafM SNP 0028.scaffold00107 589753 1 G A scaffold127 ScafM SNP 0028.scaffold00107 589762 1 A G scaffold127 ScafM SNP 0028.scaffold00107 589768 1 C G scaffold127 ScafM SNP 0028.scaffold00107 589838 1 A G scaffold127 ScafM SNP 0028.scaffold00107 589841 1 C T scaffold127 ScafM SNP 0028.scaffold00107 589871 1 T G scaffold127 ScafM SNP 0028.scaffold00107 589881 1 T C scaffold127 ScafM INDEL 0028.scaffold00107 589911 1 . G scaffold127 ScafM SNP 0028.scaffold00107 589916 1 A T scaffold127 ScafM SNP 0028.scaffold00107 589960 1 C G scaffold127 ScafM SNP 0028.scaffold00107 589987 1 T C scaffold127 ScafM INDEL 0028.scaffold00107 635520 2 .. AA scaffold25120 ScafM INDEL 0028.scaffold00107 637068 1 . A scaffold25120 ScafM INDEL 0028.scaffold00107 639527 2 AA .. scaffold25120 ScafM SNP 0028.scaffold00107 686609 1 G T scaffold542 ScafM SNP 0028.scaffold00107 698543 1 C T scaffold26741 ScafM SNP 0028.scaffold00107 698550 1 T C scaffold26741 ScafM INDEL 0028.scaffold00107 700201 19 AACCCGCGTTCATCAGCTC ................... scaffold4089 ScafM INDEL 0028.scaffold00107 700222 2 TA .. scaffold4089 ScafM INDEL 0028.scaffold00107 700237 2 CC .. scaffold4089 ScafM SNP 0028.scaffold00107 716617 1 C A scaffold4089 ScafM SNP 0028.scaffold00107 716620 1 T C scaffold4089 ScafM INDEL 0028.scaffold00107 742439 49 AAAACTCTATCTCTTACCTCGATTTCCTATCCGGCCACCGCAGCGAGCC ................................................. scaffold4089 ScafM SNP 0028.scaffold00107 742497 1 T A scaffold4089 ScafM SNP 0028.scaffold00107 742514 1 A G scaffold4089 ScafM INDEL 0028.scaffold00107 742546 8 ........ CAGTCAGC scaffold4089 ScafM SNP 0028.scaffold00107 742586 1 C T scaffold4089 ScafM SNP 0028.scaffold00107 742711 1 T C scaffold4089 ScafM INDEL 0028.scaffold00107 742898 1 G . scaffold4089 ScafM SNP 0028.scaffold00107 743206 1 A G scaffold4089 ScafM SNP 0028.scaffold00107 743733 1 T C scaffold4089 ScafM SNP 0028.scaffold00107 743735 1 G T scaffold4089 ScafM SNP 0028.scaffold00107 744014 1 G A scaffold4089 ScafM INDEL 0028.scaffold00107 744041 1 A . scaffold4089 ScafM INDEL 0028.scaffold00107 744395 44 ............................................ GACTTGAATTCAGATGCAAACTTCTCTACTGACGCTAATGAGCT scaffold4089 ScafM SNP 0028.scaffold00107 746120 1 G T scaffold4089 ScafM SNP 0028.scaffold00107 746158 1 A G scaffold4089 ScafM SNP 0028.scaffold00107 746199 1 T C scaffold4089 ScafM INDEL 0028.scaffold00107 795720 1 . C scaffold4089 ScafM INDEL 0028.scaffold00107 795723 1 . C scaffold4089 ScafM INDEL 0028.scaffold00107 795764 1 C . scaffold4089 ScafM INDEL 0028.scaffold00107 795785 1 C . scaffold4089 ScafM INDEL 0028.scaffold00107 795848 1 C . scaffold4089 ScafM INDEL 0028.scaffold00107 795852 2 .. CC scaffold4089 ScafM INDEL 0028.scaffold00107 799262 1 . T scaffold4089 ScafM SNP 0028.scaffold00107 799431 2 CA AC scaffold4089 ScafM INDEL 0028.scaffold00107 822335 19 GCTTAATTTCTTTTGAGTC ................... scaffold4089 ScafM INDEL 0028.scaffold00107 822356 1 C . scaffold4089 ScafM INDEL 0028.scaffold00107 828000 1 . A scaffold4089 ScafM INDEL 0028.scaffold00107 838033 14 TGTGTACAAACTCA .............. scaffold6883 ScafM INDEL 0028.scaffold00107 838048 2 TT .. scaffold6883 ScafM INDEL 0028.scaffold00107 838051 10 AAGGGATGAA .......... scaffold6883 ScafM INDEL 0028.scaffold00107 843774 1 . T scaffold6883 ScafM SNP 0028.scaffold00107 853002 1 T A scaffold6883 ScafM SNP 0028.scaffold00107 853011 1 T A scaffold6883 ScafM INDEL 0028.scaffold00107 853031 1 . C scaffold6883 ScafM SNP 0028.scaffold00107 853035 1 T A scaffold6883 ScafM SNP 0028.scaffold00107 853048 1 A G scaffold6883 ScafM SNP 0028.scaffold00107 853065 1 G T scaffold6883 ScafM INDEL 0028.scaffold00107 853110 1 . T scaffold6883 ReadM INDEL 0028.scaffold00107 856022 1 . G - ScafM INDEL 0028.scaffold00107 875694 3 TTT ... scaffold6883 ScafM INDEL 0028.scaffold00107 906827 2 .. CC scaffold6883 ScafM INDEL 0028.scaffold00107 920172 1 T . scaffold6883 ScafM INDEL 0028.scaffold00107 920175 18 TGGAAGAACTTTTTAGTA .................. scaffold6883 ScafM INDEL 0028.scaffold00107 920194 7 AGTTTAG ....... scaffold6883 ScafM INDEL 0028.scaffold00107 920202 1 T . scaffold6883 ScafM INDEL 0028.scaffold00107 920204 4 AAAA .... scaffold6883 ScafM INDEL 0028.scaffold00107 933931 5 ..... CCCCC scaffold6883 ReadM SNP 0028.scaffold00107 960968 1 T A - ScafM INDEL 0028.scaffold00107 967442 1 . T scaffold12119 ScafM INDEL 0028.scaffold00107 967454 1 . T scaffold12119 ScafM INDEL 0028.scaffold00107 973814 1 . T scaffold12119 ScafM INDEL 0028.scaffold00107 974294 1 . A scaffold12119 ScafM INDEL 0028.scaffold00107 974302 1 . A scaffold12119 ScafM INDEL 0028.scaffold00107 974706 1 . A scaffold12119 ScafM INDEL 0028.scaffold00107 974790 1 . T scaffold12119 ScafM INDEL 0028.scaffold00107 985943 63 ............................................................... GGGTTTTTTTTTTTTTAACAAAAACGACCTAAAACAATCAACCTGGAAGGGGGGGGGGAAGGG scaffold12119 Both SNP 0028.scaffold00107 1039734 1 A C scaffold19595 ScafM SNP 0028.scaffold00107 1046653 1 A C scaffold19595 ScafM SNP 0028.scaffold00107 1046665 1 T C scaffold19595 ScafM SNP 0028.scaffold00107 1046694 1 G A scaffold19595 ScafM SNP 0028.scaffold00107 1046706 1 A G scaffold19595 ScafM INDEL 0028.scaffold00107 1046714 1 . C scaffold19595 ScafM SNP 0028.scaffold00107 1046723 1 G A scaffold19595 ScafM SNP 0028.scaffold00107 1046763 1 A G scaffold19595 ScafM SNP 0028.scaffold00107 1046817 1 A G scaffold19595 ScafM SNP 0028.scaffold00107 1046819 1 A T scaffold19595 ScafM SNP 0028.scaffold00107 1046856 1 A C scaffold19595 ScafM SNP 0028.scaffold00107 1046863 1 T C scaffold19595 ScafM INDEL 0028.scaffold00107 1047769 1 A . scaffold19595 ScafM INDEL 0028.scaffold00107 1058866 81 ................................................................................. GTTCCTCCCCTCCCTCCAAAGCTTAAGAGGGGGTTTGGTTGTTATGGAGTAAAGGGAATGGAATCAAGAAAGGGGTAGAAG scaffold19595 Both INDEL 0028.scaffold00107 1060094 1 C . scaffold19595 ScafM INDEL 0028.scaffold00107 1060097 2 .. CC scaffold19595 ScafM INDEL 0028.scaffold00107 1060121 18 AGCTCCAGCTACAACTCT .................. scaffold19595 ScafM INDEL 0028.scaffold00107 1063457 64 TTCCAGCACACCAGCATTTATATCTTCTTCAGTATTACACCCAAGCGATTTCTCCTTCCTTTTT ................................................................ scaffold19595 ScafM SNP 0028.scaffold00107 1067688 2 GG AA scaffold19595 ScafM INDEL 0028.scaffold00107 1079486 1 . T scaffold2938 ReadM SNP 0028.scaffold00107 1082117 1 A G - ScafM INDEL 0028.scaffold00107 1092692 5 TGCCT ..... scaffold2938 ScafM INDEL 0028.scaffold00107 1092700 3 CCC ... scaffold2938 ScafM INDEL 0028.scaffold00107 1092704 1 C . scaffold2938 ScafM INDEL 0028.scaffold00107 1092713 9 TTCTATTTT .......GG scaffold2938 ScafM SNP 0028.scaffold00107 1116102 1 G A scaffold2938 ScafM INDEL 0028.scaffold00107 1117288 1 . A scaffold2938 ReadM INDEL 0028.scaffold00107 1194489 1 T . - ReadM SNP 0029.scaffold00112 2609 1 T A - ScafM SNP 0029.scaffold00112 7984 1 C T scaffold6908 Both SNP 0029.scaffold00112 12796 1 A C scaffold6908 ScafM INDEL 0029.scaffold00112 13001 1 . A scaffold6908 ScafM INDEL 0029.scaffold00112 13064 8 ........ AAAAAGTT scaffold6908 ScafM SNP 0029.scaffold00112 13095 1 T C scaffold6908 ScafM INDEL 0029.scaffold00112 13455 1 C . scaffold6908 ScafM SNP 0029.scaffold00112 13720 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 15105 1 G T scaffold6908 ScafM SNP 0029.scaffold00112 15247 1 G A scaffold6908 ScafM SNP 0029.scaffold00112 15365 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 15563 1 A G scaffold6908 ScafM SNP 0029.scaffold00112 16104 1 T C scaffold6908 ScafM INDEL 0029.scaffold00112 16524 1 . T scaffold6908 ScafM INDEL 0029.scaffold00112 16525 3 ... TTC scaffold6908 ScafM INDEL 0029.scaffold00112 16527 4 .... ATAA scaffold6908 ScafM INDEL 0029.scaffold00112 16529 2 .. AT scaffold6908 ScafM SNP 0029.scaffold00112 16535 1 C T scaffold6908 ScafM SNP 0029.scaffold00112 16553 1 T G scaffold6908 ScafM SNP 0029.scaffold00112 17033 1 C A scaffold6908 ScafM INDEL 0029.scaffold00112 17144 1 A . scaffold6908 ScafM SNP 0029.scaffold00112 17231 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 17234 1 C G scaffold6908 ScafM SNP 0029.scaffold00112 18013 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 18117 1 A C scaffold6908 ScafM SNP 0029.scaffold00112 18132 1 G A scaffold6908 ScafM SNP 0029.scaffold00112 22156 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 22171 1 T A scaffold6908 ScafM INDEL 0029.scaffold00112 22197 27 AAACATAAGAGCAAAACTAATTAAGCC ........................... scaffold6908 ScafM SNP 0029.scaffold00112 22662 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 22665 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 22827 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 22836 1 T G scaffold6908 ScafM SNP 0029.scaffold00112 22857 2 AT CC scaffold6908 ScafM SNP 0029.scaffold00112 22890 1 A C scaffold6908 ScafM SNP 0029.scaffold00112 22894 1 G T scaffold6908 ScafM SNP 0029.scaffold00112 22903 1 G A scaffold6908 ScafM SNP 0029.scaffold00112 22913 1 A G scaffold6908 ScafM SNP 0029.scaffold00112 22932 1 G A scaffold6908 ScafM SNP 0029.scaffold00112 22971 1 G T scaffold6908 ScafM SNP 0029.scaffold00112 23110 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 24062 1 A G scaffold6908 ScafM SNP 0029.scaffold00112 24086 1 T A scaffold6908 ScafM SNP 0029.scaffold00112 24112 1 C G scaffold6908 ScafM SNP 0029.scaffold00112 24166 1 A G scaffold6908 ScafM SNP 0029.scaffold00112 25562 3 ATA CCC scaffold6908 ScafM INDEL 0029.scaffold00112 25565 4 .TCC AGAG scaffold6908 ScafM INDEL 0029.scaffold00112 25572 1 . A scaffold6908 ScafM SNP 0029.scaffold00112 26215 1 A T scaffold6908 ScafM SNP 0029.scaffold00112 26310 1 G C scaffold6908 ScafM SNP 0029.scaffold00112 26539 1 C T scaffold6908 ScafM SNP 0029.scaffold00112 26564 1 T G scaffold6908 ScafM SNP 0029.scaffold00112 26584 1 T C scaffold6908 ScafM INDEL 0029.scaffold00112 26946 2 .. CT scaffold6908 ScafM INDEL 0029.scaffold00112 26948 14 .............. TCCTAACTGAGAAA scaffold6908 ScafM INDEL 0029.scaffold00112 26951 13 ............. ATACAGAACCCAC scaffold6908 ScafM INDEL 0029.scaffold00112 26953 1 . G scaffold6908 ScafM SNP 0029.scaffold00112 26965 1 C A scaffold6908 ScafM SNP 0029.scaffold00112 27003 1 A C scaffold6908 ScafM SNP 0029.scaffold00112 27033 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 27074 1 C T scaffold6908 ScafM SNP 0029.scaffold00112 27151 1 C G scaffold6908 ScafM SNP 0029.scaffold00112 27160 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 27251 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 27276 1 T C scaffold6908 ScafM SNP 0029.scaffold00112 27398 1 T G scaffold6908 ScafM INDEL 0029.scaffold00112 27427 11 ........... ATACTCGGTAA scaffold6908 ScafM SNP 0029.scaffold00112 28053 1 C T scaffold6908 ScafM INDEL 0029.scaffold00112 28150 41 ......................................... TTAGTATCTACACATATATGTACTTAATTTTAATCACAGAT scaffold6908 ReadM SNP 0029.scaffold00112 32144 1 T C - ScafM INDEL 0029.scaffold00112 47048 2 .. CC scaffold37483 ReadM SNP 0030.scaffold00117 454 1 G A - ReadM SNP 0030.scaffold00117 469 1 T C - ReadM SNP 0030.scaffold00117 484 1 C A - ReadM SNP 0030.scaffold00117 583 1 A G - ReadM SNP 0030.scaffold00117 688 1 G A - ReadM SNP 0030.scaffold00117 793 1 T C - ReadM SNP 0030.scaffold00117 795 1 G A - ReadM SNP 0030.scaffold00117 810 1 T C - ReadM SNP 0030.scaffold00117 906 1 A G - Both SNP 0030.scaffold00117 1010 1 G A scaffold8911 Both SNP 0030.scaffold00117 1028 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 1182 1 T C scaffold8911 ScafM SNP 0030.scaffold00117 1189 1 A C scaffold8911 ScafM SNP 0030.scaffold00117 1203 1 C T scaffold8911 ReadM INDEL 0030.scaffold00117 1298 1 T . - Both SNP 0030.scaffold00117 1500 1 T C scaffold8911 Both SNP 0030.scaffold00117 1561 1 G A scaffold8911 Both SNP 0030.scaffold00117 1568 1 A T scaffold8911 ReadM SNP 0030.scaffold00117 1629 1 C A - ReadM SNP 0030.scaffold00117 1833 1 A C - ReadM INDEL 0030.scaffold00117 1880 1 A . - ReadM SNP 0030.scaffold00117 1908 1 T C - ReadM SNP 0030.scaffold00117 1939 1 A G - ReadM INDEL 0030.scaffold00117 1964 1 . A - ReadM SNP 0030.scaffold00117 2129 1 A G - ReadM SNP 0030.scaffold00117 2182 1 T A - ReadM SNP 0030.scaffold00117 2282 1 T C - ReadM SNP 0030.scaffold00117 2447 1 C A - ReadM SNP 0030.scaffold00117 2462 1 T A - ReadM SNP 0030.scaffold00117 2515 1 C T - ReadM SNP 0030.scaffold00117 2543 1 G A - ReadM SNP 0030.scaffold00117 2655 1 C T - ReadM SNP 0030.scaffold00117 2668 1 T G - ReadM SNP 0030.scaffold00117 2670 1 T C - ReadM SNP 0030.scaffold00117 2943 1 C T - ReadM SNP 0030.scaffold00117 2980 1 T C - ReadM INDEL 0030.scaffold00117 3054 1 T . - ReadM SNP 0030.scaffold00117 3261 1 C A - ReadM SNP 0030.scaffold00117 3639 1 T A - ReadM SNP 0030.scaffold00117 3641 1 T C - ReadM SNP 0030.scaffold00117 6123 1 A G - ReadM SNP 0030.scaffold00117 6167 1 A G - ReadM SNP 0030.scaffold00117 6229 1 C G - ReadM SNP 0030.scaffold00117 6282 1 G A - ReadM SNP 0030.scaffold00117 6305 1 T G - ReadM SNP 0030.scaffold00117 10176 1 A G - ReadM INDEL 0030.scaffold00117 10493 3 AAA ... - ReadM SNP 0030.scaffold00117 10743 1 T C - ReadM SNP 0030.scaffold00117 10758 1 A T - ReadM SNP 0030.scaffold00117 10792 1 A C - ReadM SNP 0030.scaffold00117 10799 1 C T - ReadM SNP 0030.scaffold00117 10839 1 T C - ScafM SNP 0030.scaffold00117 11150 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 11186 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 11197 1 T C scaffold8911 ScafM INDEL 0030.scaffold00117 11376 1 . A scaffold8911 ScafM SNP 0030.scaffold00117 11459 1 A G scaffold8911 ScafM INDEL 0030.scaffold00117 11504 1 . A scaffold8911 ScafM INDEL 0030.scaffold00117 11526 1 . A scaffold8911 ScafM SNP 0030.scaffold00117 11533 1 C T scaffold8911 ScafM SNP 0030.scaffold00117 11536 1 C T scaffold8911 ScafM INDEL 0030.scaffold00117 11550 1 . A scaffold8911 ScafM SNP 0030.scaffold00117 11597 1 C T scaffold8911 ScafM INDEL 0030.scaffold00117 11602 1 T . scaffold8911 ScafM INDEL 0030.scaffold00117 11617 1 T . scaffold8911 ScafM SNP 0030.scaffold00117 11668 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 11693 1 A T scaffold8911 ScafM SNP 0030.scaffold00117 12123 1 C G scaffold8911 ScafM SNP 0030.scaffold00117 12139 1 G A scaffold8911 ScafM SNP 0030.scaffold00117 12241 1 A T scaffold8911 ScafM SNP 0030.scaffold00117 12324 1 C T scaffold8911 ScafM SNP 0030.scaffold00117 12327 1 C T scaffold8911 ScafM SNP 0030.scaffold00117 12340 1 G A scaffold8911 ScafM SNP 0030.scaffold00117 12342 1 T G scaffold8911 ScafM INDEL 0030.scaffold00117 12718 2 .A TG scaffold8911 ScafM INDEL 0030.scaffold00117 12725 1 . C scaffold8911 ScafM INDEL 0030.scaffold00117 12733 1 A . scaffold8911 ScafM SNP 0030.scaffold00117 12737 1 G T scaffold8911 ScafM SNP 0030.scaffold00117 12741 1 T A scaffold8911 ScafM SNP 0030.scaffold00117 12747 1 C T scaffold8911 ScafM SNP 0030.scaffold00117 12769 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 12777 1 G A scaffold8911 ScafM SNP 0030.scaffold00117 12807 1 T G scaffold8911 ScafM SNP 0030.scaffold00117 12835 1 T A scaffold8911 ScafM SNP 0030.scaffold00117 12846 1 A T scaffold8911 ScafM SNP 0030.scaffold00117 12848 1 T C scaffold8911 ScafM INDEL 0030.scaffold00117 12892 1 . G scaffold8911 ScafM INDEL 0030.scaffold00117 12897 2 .. TT scaffold8911 ScafM INDEL 0030.scaffold00117 12950 11 TGAATTTCTTG ........... scaffold8911 Both SNP 0030.scaffold00117 12990 1 A G scaffold8911 Both SNP 0030.scaffold00117 13026 1 G A scaffold8911 Both SNP 0030.scaffold00117 13044 1 A C scaffold8911 Both SNP 0030.scaffold00117 13226 1 A C scaffold8911 ScafM INDEL 0030.scaffold00117 13267 7 AATTGTG ....... scaffold8911 Both SNP 0030.scaffold00117 13282 1 G A scaffold8911 Both SNP 0030.scaffold00117 13741 1 T G scaffold8911 Both SNP 0030.scaffold00117 13835 1 G A scaffold8911 Both SNP 0030.scaffold00117 13866 1 G T scaffold8911 Both SNP 0030.scaffold00117 13879 1 A T scaffold8911 Both SNP 0030.scaffold00117 13920 1 C G scaffold8911 Both SNP 0030.scaffold00117 13978 1 T C scaffold8911 Both SNP 0030.scaffold00117 14010 1 G T scaffold8911 Both SNP 0030.scaffold00117 14023 1 T C scaffold8911 Both SNP 0030.scaffold00117 14026 1 C A scaffold8911 Both SNP 0030.scaffold00117 14169 1 A T scaffold8911 Both SNP 0030.scaffold00117 14188 1 G C scaffold8911 ScafM SNP 0030.scaffold00117 14247 2 AA TT scaffold8911 Both INDEL 0030.scaffold00117 14249 1 . C scaffold8911 Both SNP 0030.scaffold00117 14451 1 C T scaffold8911 Both SNP 0030.scaffold00117 14699 1 A C scaffold8911 Both SNP 0030.scaffold00117 14746 1 T C scaffold8911 Both SNP 0030.scaffold00117 14828 1 C T scaffold8911 Both SNP 0030.scaffold00117 14830 1 C T scaffold8911 Both SNP 0030.scaffold00117 14892 1 C T scaffold8911 Both SNP 0030.scaffold00117 14984 1 G T scaffold8911 Both SNP 0030.scaffold00117 14994 1 G A scaffold8911 Both SNP 0030.scaffold00117 15010 1 C T scaffold8911 Both SNP 0030.scaffold00117 15042 1 A G scaffold8911 Both SNP 0030.scaffold00117 15054 1 A G scaffold8911 ReadM SNP 0030.scaffold00117 15117 1 G A - ReadM SNP 0030.scaffold00117 15172 1 C T - Both SNP 0030.scaffold00117 15282 1 T C scaffold8911 Both SNP 0030.scaffold00117 15592 1 G A scaffold8911 Both SNP 0030.scaffold00117 15604 1 C G scaffold8911 Both SNP 0030.scaffold00117 15648 1 T C scaffold8911 Both SNP 0030.scaffold00117 15656 1 C A scaffold8911 Both SNP 0030.scaffold00117 15734 1 A T scaffold8911 Both SNP 0030.scaffold00117 15808 1 T G scaffold8911 Both SNP 0030.scaffold00117 15817 1 A G scaffold8911 Both SNP 0030.scaffold00117 15899 1 G A scaffold8911 Both SNP 0030.scaffold00117 16003 1 A T scaffold8911 ScafM INDEL 0030.scaffold00117 16123 7 ....... AAGAAAA scaffold8911 Both SNP 0030.scaffold00117 16231 1 A C scaffold8911 ReadM INDEL 0030.scaffold00117 16356 3 TTT ... - ReadM INDEL 0030.scaffold00117 16442 1 . G - Both INDEL 0030.scaffold00117 16487 3 ... TTA scaffold8911 Both SNP 0030.scaffold00117 16676 1 G A scaffold8911 Both SNP 0030.scaffold00117 16685 1 C A scaffold8911 ReadM SNP 0030.scaffold00117 16766 1 C T - ReadM SNP 0030.scaffold00117 16786 1 C T - ScafM INDEL 0030.scaffold00117 17699 1 G . scaffold8911 ScafM INDEL 0030.scaffold00117 17718 2 .A GT scaffold8911 ScafM INDEL 0030.scaffold00117 17778 1 A . scaffold8911 ScafM SNP 0030.scaffold00117 17806 1 G A scaffold8911 ScafM INDEL 0030.scaffold00117 17854 20 ATATATGTATCATTGCATTT .................... scaffold8911 ScafM SNP 0030.scaffold00117 17963 1 T A scaffold8911 ReadM SNP 0030.scaffold00117 18094 1 A G - ReadM SNP 0030.scaffold00117 18111 1 T A - ReadM SNP 0030.scaffold00117 18144 1 T C - ReadM SNP 0030.scaffold00117 18165 1 C T - ReadM SNP 0030.scaffold00117 18551 1 G A - ReadM INDEL 0030.scaffold00117 18617 1 G . - ScafM SNP 0030.scaffold00117 18886 1 G A scaffold8911 Both SNP 0030.scaffold00117 19034 1 T C scaffold8911 Both SNP 0030.scaffold00117 19066 1 A T scaffold8911 Both SNP 0030.scaffold00117 19235 1 C A scaffold8911 Both SNP 0030.scaffold00117 19316 1 G A scaffold8911 Both SNP 0030.scaffold00117 19619 1 G A scaffold8911 ReadM SNP 0030.scaffold00117 19675 1 C T - ScafM SNP 0030.scaffold00117 19804 1 A G scaffold8911 ScafM INDEL 0030.scaffold00117 19834 3 ... AAA scaffold8911 ScafM SNP 0030.scaffold00117 19836 1 G A scaffold8911 ScafM SNP 0030.scaffold00117 19863 1 T C scaffold8911 ScafM SNP 0030.scaffold00117 20025 1 G T scaffold8911 ScafM SNP 0030.scaffold00117 20031 1 A G scaffold8911 ScafM SNP 0030.scaffold00117 20033 1 G A scaffold8911 Both SNP 0030.scaffold00117 20058 1 G T scaffold8911 ScafM INDEL 0030.scaffold00117 20169 13 ............. GTTAGAAAGTTGT scaffold8911 ScafM SNP 0030.scaffold00117 20178 1 T A scaffold8911 ScafM SNP 0030.scaffold00117 20184 1 T A scaffold8911 ScafM SNP 0030.scaffold00117 20329 1 G A scaffold8911 Both SNP 0030.scaffold00117 20454 1 A T scaffold8911 ScafM SNP 0030.scaffold00117 22317 1 T A scaffold8911 ScafM SNP 0030.scaffold00117 22330 1 T C scaffold8911 ScafM SNP 0030.scaffold00117 22370 1 G A scaffold8911 ScafM SNP 0030.scaffold00117 22402 1 T G scaffold8911 ScafM INDEL 0030.scaffold00117 22444 2 AA .. scaffold8911 ReadM SNP 0030.scaffold00117 25464 1 A G - ReadM SNP 0030.scaffold00117 25474 1 A G - ReadM SNP 0030.scaffold00117 25554 1 A G - ReadM SNP 0030.scaffold00117 25923 1 T A - ReadM SNP 0030.scaffold00117 26515 1 G A - ReadM SNP 0030.scaffold00117 27066 1 A C - ReadM SNP 0030.scaffold00117 27372 1 A G - ReadM SNP 0030.scaffold00117 27503 1 G A - ReadM INDEL 0030.scaffold00117 27947 1 G . - ReadM SNP 0030.scaffold00117 27957 1 A G - ReadM SNP 0030.scaffold00117 30272 1 C T - ReadM SNP 0030.scaffold00117 30826 1 C T - ScafM SNP 0030.scaffold00117 31123 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 31151 1 A G scaffold7513 Both SNP 0030.scaffold00117 31284 1 G A scaffold7513 ReadM SNP 0030.scaffold00117 31383 1 T C - ReadM SNP 0030.scaffold00117 31629 1 T C - ReadM SNP 0030.scaffold00117 31800 1 A G - ReadM SNP 0030.scaffold00117 32022 1 G A - ReadM SNP 0030.scaffold00117 32028 1 A T - ReadM SNP 0030.scaffold00117 32313 1 A G - ScafM INDEL 0030.scaffold00117 32419 6 ...... AGTTGT scaffold7513 Both SNP 0030.scaffold00117 32682 1 A G scaffold7513 Both INDEL 0030.scaffold00117 32730 2 TT .. scaffold7513 Both SNP 0030.scaffold00117 32750 1 G A scaffold7513 Both INDEL 0030.scaffold00117 32783 1 . A scaffold7513 Both SNP 0030.scaffold00117 32828 1 G A scaffold7513 Both SNP 0030.scaffold00117 32846 1 G A scaffold7513 Both SNP 0030.scaffold00117 32853 1 T G scaffold7513 Both SNP 0030.scaffold00117 32968 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 33040 1 G C scaffold7513 ScafM INDEL 0030.scaffold00117 33062 8 CCTTTTTT ........ scaffold7513 ScafM INDEL 0030.scaffold00117 33077 2 GT .A scaffold7513 ScafM INDEL 0030.scaffold00117 33088 1 T . scaffold7513 Both SNP 0030.scaffold00117 33244 1 C T scaffold7513 Both SNP 0030.scaffold00117 33281 1 G C scaffold7513 Both INDEL 0030.scaffold00117 33287 1 . G scaffold7513 Both SNP 0030.scaffold00117 33352 1 T G scaffold7513 Both SNP 0030.scaffold00117 33358 1 G C scaffold7513 Both SNP 0030.scaffold00117 33655 1 A G scaffold7513 Both SNP 0030.scaffold00117 33701 1 A G scaffold7513 Both SNP 0030.scaffold00117 33746 1 G A scaffold7513 Both SNP 0030.scaffold00117 33826 1 G A scaffold7513 Both SNP 0030.scaffold00117 33885 1 C G scaffold7513 ScafM SNP 0030.scaffold00117 33913 1 C G scaffold7513 ScafM SNP 0030.scaffold00117 33915 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 33947 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 33973 1 G C scaffold7513 ScafM SNP 0030.scaffold00117 33987 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 34006 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 34016 1 C T scaffold7513 Both SNP 0030.scaffold00117 34020 1 C A scaffold7513 Both SNP 0030.scaffold00117 34133 1 C A scaffold7513 Both SNP 0030.scaffold00117 34147 1 A G scaffold7513 Both SNP 0030.scaffold00117 34155 1 C A scaffold7513 Both SNP 0030.scaffold00117 34183 1 A C scaffold7513 Both SNP 0030.scaffold00117 34350 1 A G scaffold7513 ScafM INDEL 0030.scaffold00117 34417 3 ... ATA scaffold7513 ScafM INDEL 0030.scaffold00117 34418 1 . C scaffold7513 Both SNP 0030.scaffold00117 34499 1 G A scaffold7513 Both SNP 0030.scaffold00117 34607 1 C A scaffold7513 ScafM SNP 0030.scaffold00117 34847 1 C T scaffold7513 Both SNP 0030.scaffold00117 34981 1 A G scaffold7513 Both SNP 0030.scaffold00117 35068 1 A G scaffold7513 Both SNP 0030.scaffold00117 35074 1 G T scaffold7513 Both INDEL 0030.scaffold00117 35262 1 . T scaffold7513 Both SNP 0030.scaffold00117 35385 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 35523 1 A T scaffold7513 ScafM INDEL 0030.scaffold00117 35532 9 ......... GAGTTGGCT scaffold7513 ScafM INDEL 0030.scaffold00117 35557 3 TTT ... scaffold7513 Both INDEL 0030.scaffold00117 35609 1 T . scaffold7513 Both SNP 0030.scaffold00117 35640 1 T C scaffold7513 Both SNP 0030.scaffold00117 35806 1 T C scaffold7513 Both SNP 0030.scaffold00117 35849 1 C T scaffold7513 ScafM INDEL 0030.scaffold00117 35898 3 ... GGG scaffold7513 Both SNP 0030.scaffold00117 35924 1 A G scaffold7513 Both SNP 0030.scaffold00117 35944 1 G C scaffold7513 Both INDEL 0030.scaffold00117 35961 1 . T scaffold7513 Both SNP 0030.scaffold00117 36088 1 G A scaffold7513 Both SNP 0030.scaffold00117 36126 1 T C scaffold7513 Both SNP 0030.scaffold00117 36193 1 T C scaffold7513 Both SNP 0030.scaffold00117 36222 1 C T scaffold7513 Both SNP 0030.scaffold00117 36328 1 A T scaffold7513 Both SNP 0030.scaffold00117 36348 1 C T scaffold7513 Both SNP 0030.scaffold00117 36500 1 C T scaffold7513 ReadM SNP 0030.scaffold00117 36801 1 C T - ReadM INDEL 0030.scaffold00117 36820 1 . T - ReadM SNP 0030.scaffold00117 36830 1 T C - ReadM INDEL 0030.scaffold00117 36857 1 . C - Both SNP 0030.scaffold00117 36989 1 C T scaffold7513 Both SNP 0030.scaffold00117 37384 1 G A scaffold7513 Both SNP 0030.scaffold00117 37395 1 A C scaffold7513 Both SNP 0030.scaffold00117 37506 1 C A scaffold7513 Both SNP 0030.scaffold00117 37569 1 C T scaffold7513 Both SNP 0030.scaffold00117 37645 1 T G scaffold7513 Both SNP 0030.scaffold00117 37770 1 C T scaffold7513 Both SNP 0030.scaffold00117 37927 1 C G scaffold7513 ReadM SNP 0030.scaffold00117 38003 1 A T - ReadM SNP 0030.scaffold00117 38051 1 C G - Both SNP 0030.scaffold00117 38181 1 A G scaffold7513 Both SNP 0030.scaffold00117 38213 1 G A scaffold7513 Both SNP 0030.scaffold00117 38356 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 38491 1 T A scaffold7513 ScafM SNP 0030.scaffold00117 38495 2 CC TT scaffold7513 ScafM SNP 0030.scaffold00117 38509 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 38524 1 A C scaffold7513 ScafM SNP 0030.scaffold00117 38544 1 T G scaffold7513 ScafM SNP 0030.scaffold00117 38560 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 38626 1 A G scaffold7513 ScafM INDEL 0030.scaffold00117 38675 2 CT .. scaffold7513 ScafM INDEL 0030.scaffold00117 38678 2 TC .. scaffold7513 ScafM SNP 0030.scaffold00117 38705 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 38772 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 38866 2 GC AA scaffold7513 ScafM SNP 0030.scaffold00117 38896 1 C A scaffold7513 ScafM INDEL 0030.scaffold00117 38916 1 . C scaffold7513 ScafM SNP 0030.scaffold00117 38959 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 38991 1 C G scaffold7513 ScafM SNP 0030.scaffold00117 39064 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 39093 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 39109 1 G A scaffold7513 ScafM INDEL 0030.scaffold00117 39176 1 . T scaffold7513 ScafM SNP 0030.scaffold00117 39334 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 39349 1 C T scaffold7513 Both SNP 0030.scaffold00117 39478 1 G T scaffold7513 Both SNP 0030.scaffold00117 39681 1 C T scaffold7513 ReadM INDEL 0030.scaffold00117 39690 1 T . - ScafM INDEL 0030.scaffold00117 39690 2 TT .A scaffold7513 ScafM SNP 0030.scaffold00117 39959 1 T A scaffold7513 ScafM SNP 0030.scaffold00117 39975 2 CA TT scaffold7513 ScafM SNP 0030.scaffold00117 39988 1 T C scaffold7513 ScafM INDEL 0030.scaffold00117 40012 22 TTGAGACATCCCCCCCCCCCCC ...................... scaffold7513 ScafM SNP 0030.scaffold00117 40050 1 T C scaffold7513 Both INDEL 0030.scaffold00117 40077 1 . C scaffold7513 ScafM SNP 0030.scaffold00117 40101 1 T G scaffold7513 Both SNP 0030.scaffold00117 40109 1 T G scaffold7513 Both SNP 0030.scaffold00117 40205 1 G A scaffold7513 Both SNP 0030.scaffold00117 40368 1 A G scaffold7513 Both SNP 0030.scaffold00117 40380 1 T A scaffold7513 Both SNP 0030.scaffold00117 40886 1 A T scaffold7513 Both SNP 0030.scaffold00117 40891 1 A T scaffold7513 Both SNP 0030.scaffold00117 40994 1 T C scaffold7513 Both INDEL 0030.scaffold00117 41104 1 . G scaffold7513 Both SNP 0030.scaffold00117 41114 1 T C scaffold7513 Both SNP 0030.scaffold00117 41155 1 C T scaffold7513 Both SNP 0030.scaffold00117 41199 1 A T scaffold7513 ReadM SNP 0030.scaffold00117 41737 1 A G - ReadM SNP 0030.scaffold00117 41752 1 G C - ReadM SNP 0030.scaffold00117 41772 1 C T - ReadM SNP 0030.scaffold00117 41966 1 C T - Both SNP 0030.scaffold00117 42205 1 G A scaffold7513 ScafM INDEL 0030.scaffold00117 42231 15 ATTCAACAAATCCAG ............... scaffold7513 ScafM INDEL 0030.scaffold00117 42256 1 C . scaffold7513 ScafM INDEL 0030.scaffold00117 42259 2 TT .. scaffold7513 ScafM INDEL 0030.scaffold00117 42262 1 T . scaffold7513 ScafM INDEL 0030.scaffold00117 42267 1 T . scaffold7513 ScafM SNP 0030.scaffold00117 42275 1 C T scaffold7513 ScafM INDEL 0030.scaffold00117 42281 1 T . scaffold7513 ScafM INDEL 0030.scaffold00117 42283 1 T . scaffold7513 Both SNP 0030.scaffold00117 42366 1 T G scaffold7513 Both SNP 0030.scaffold00117 42445 1 T C scaffold7513 Both SNP 0030.scaffold00117 42518 1 C T scaffold7513 Both SNP 0030.scaffold00117 42563 1 G A scaffold7513 Both SNP 0030.scaffold00117 42787 1 A G scaffold7513 Both SNP 0030.scaffold00117 42831 1 A T scaffold7513 Both SNP 0030.scaffold00117 42833 1 A T scaffold7513 Both SNP 0030.scaffold00117 43010 1 G A scaffold7513 Both SNP 0030.scaffold00117 43012 1 G T scaffold7513 Both SNP 0030.scaffold00117 43049 1 T C scaffold7513 Both SNP 0030.scaffold00117 43191 1 G A scaffold7513 Both INDEL 0030.scaffold00117 43203 1 A . scaffold7513 Both SNP 0030.scaffold00117 43220 1 A G scaffold7513 Both SNP 0030.scaffold00117 43315 1 C G scaffold7513 Both SNP 0030.scaffold00117 43345 1 G A scaffold7513 Both SNP 0030.scaffold00117 43456 1 A G scaffold7513 Both INDEL 0030.scaffold00117 43605 1 . T scaffold7513 Both SNP 0030.scaffold00117 43609 1 G T scaffold7513 Both SNP 0030.scaffold00117 43645 1 T A scaffold7513 Both SNP 0030.scaffold00117 43710 1 C G scaffold7513 Both SNP 0030.scaffold00117 43795 1 C T scaffold7513 ScafM INDEL 0030.scaffold00117 43867 10 .......... TGTATTTGCT scaffold7513 ScafM INDEL 0030.scaffold00117 43872 10 .......... CAAGAGTATC scaffold7513 ScafM INDEL 0030.scaffold00117 43874 17 ................. GAGAGATACTACGTTTG scaffold7513 Both SNP 0030.scaffold00117 43924 1 G A scaffold7513 Both SNP 0030.scaffold00117 43966 1 C T scaffold7513 Both SNP 0030.scaffold00117 43996 1 T C scaffold7513 Both SNP 0030.scaffold00117 44143 1 C T scaffold7513 Both INDEL 0030.scaffold00117 44192 2 CA .. scaffold7513 ScafM INDEL 0030.scaffold00117 44471 1 . A scaffold7513 Both SNP 0030.scaffold00117 44532 1 G A scaffold7513 Both SNP 0030.scaffold00117 44634 1 A C scaffold7513 Both SNP 0030.scaffold00117 44651 1 G T scaffold7513 Both SNP 0030.scaffold00117 44767 1 C T scaffold7513 ScafM INDEL 0030.scaffold00117 45150 10 .......... GTAGTAAGAG scaffold7513 ScafM INDEL 0030.scaffold00117 45162 1 . C scaffold7513 Both INDEL 0030.scaffold00117 45186 1 . A scaffold7513 Both SNP 0030.scaffold00117 45435 1 G C scaffold7513 ScafM SNP 0030.scaffold00117 45440 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 45452 1 A C scaffold7513 ScafM SNP 0030.scaffold00117 45461 2 GT AC scaffold7513 Both SNP 0030.scaffold00117 45542 1 G A scaffold7513 Both INDEL 0030.scaffold00117 45570 1 . A scaffold7513 Both SNP 0030.scaffold00117 45705 1 A G scaffold7513 Both SNP 0030.scaffold00117 45744 1 T G scaffold7513 Both SNP 0030.scaffold00117 45804 1 C T scaffold7513 Both SNP 0030.scaffold00117 45855 1 G A scaffold7513 Both SNP 0030.scaffold00117 45926 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 45954 2 GT AC scaffold7513 ScafM SNP 0030.scaffold00117 45963 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 45977 1 G A scaffold7513 Both SNP 0030.scaffold00117 45983 1 T A scaffold7513 Both SNP 0030.scaffold00117 46011 1 T C scaffold7513 Both SNP 0030.scaffold00117 46106 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 46112 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 46116 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 46128 1 G T scaffold7513 ScafM SNP 0030.scaffold00117 46133 1 A G scaffold7513 ReadM SNP 0030.scaffold00117 46235 1 G A - ReadM SNP 0030.scaffold00117 46256 1 T C - ReadM SNP 0030.scaffold00117 46265 1 A G - ReadM SNP 0030.scaffold00117 46401 1 C T - ReadM SNP 0030.scaffold00117 46404 1 T C - ReadM SNP 0030.scaffold00117 46462 1 C G - Both INDEL 0030.scaffold00117 46546 1 T . scaffold7513 Both SNP 0030.scaffold00117 46641 1 T C scaffold7513 Both SNP 0030.scaffold00117 46772 1 C A scaffold7513 ScafM SNP 0030.scaffold00117 46881 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 46889 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 46900 2 CC TT scaffold7513 Both SNP 0030.scaffold00117 46962 1 T A scaffold7513 ReadM SNP 0030.scaffold00117 47081 1 A G - ReadM SNP 0030.scaffold00117 47178 1 A G - ReadM SNP 0030.scaffold00117 47203 1 T C - ReadM SNP 0030.scaffold00117 47221 1 T G - Both SNP 0030.scaffold00117 47316 1 C G scaffold7513 Both SNP 0030.scaffold00117 47356 1 C G scaffold7513 Both SNP 0030.scaffold00117 47395 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 47404 1 A C scaffold7513 ScafM SNP 0030.scaffold00117 47420 1 T A scaffold7513 ScafM INDEL 0030.scaffold00117 47459 2 TG .C scaffold7513 ScafM SNP 0030.scaffold00117 47463 1 G T scaffold7513 ScafM SNP 0030.scaffold00117 47502 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 47518 2 GC TA scaffold7513 ScafM SNP 0030.scaffold00117 47531 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 47535 1 T C scaffold7513 Both SNP 0030.scaffold00117 47791 1 C T scaffold7513 Both SNP 0030.scaffold00117 47803 1 G A scaffold7513 Both SNP 0030.scaffold00117 47856 1 G A scaffold7513 Both SNP 0030.scaffold00117 47867 1 T C scaffold7513 Both SNP 0030.scaffold00117 47968 1 A C scaffold7513 Both SNP 0030.scaffold00117 48084 1 C T scaffold7513 Both SNP 0030.scaffold00117 48146 1 C A scaffold7513 ScafM SNP 0030.scaffold00117 48156 2 GG AA scaffold7513 Both SNP 0030.scaffold00117 48333 1 C T scaffold7513 Both INDEL 0030.scaffold00117 48340 1 A . scaffold7513 Both SNP 0030.scaffold00117 48355 1 T G scaffold7513 ScafM SNP 0030.scaffold00117 48422 3 CCA TTG scaffold7513 ScafM INDEL 0030.scaffold00117 48430 4 AAAC .... scaffold7513 Both SNP 0030.scaffold00117 48564 1 C G scaffold7513 Both SNP 0030.scaffold00117 48648 1 G C scaffold7513 Both SNP 0030.scaffold00117 48696 1 G T scaffold7513 Both SNP 0030.scaffold00117 48742 1 A G scaffold7513 Both INDEL 0030.scaffold00117 48782 3 TGT ... scaffold7513 Both SNP 0030.scaffold00117 49041 1 T C scaffold7513 Both SNP 0030.scaffold00117 49145 1 A G scaffold7513 Both SNP 0030.scaffold00117 49421 1 T C scaffold7513 Both SNP 0030.scaffold00117 49736 1 C T scaffold7513 Both SNP 0030.scaffold00117 49815 1 G A scaffold7513 Both SNP 0030.scaffold00117 50366 1 C A scaffold7513 Both SNP 0030.scaffold00117 50696 1 G C scaffold7513 Both SNP 0030.scaffold00117 50897 1 G T scaffold7513 Both INDEL 0030.scaffold00117 51065 1 . T scaffold7513 ScafM INDEL 0030.scaffold00117 51138 17 TTCAGACTTTAGAGTGG ................. scaffold7513 Both SNP 0030.scaffold00117 51293 1 T C scaffold7513 ScafM INDEL 0030.scaffold00117 51352 3 ... AAA scaffold7513 ScafM SNP 0030.scaffold00117 51358 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 51384 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 51388 1 G T scaffold7513 ScafM SNP 0030.scaffold00117 51406 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 51435 1 C T scaffold7513 ScafM INDEL 0030.scaffold00117 51442 7 ATAGATC ....... scaffold7513 ScafM SNP 0030.scaffold00117 51479 1 G C scaffold7513 ScafM SNP 0030.scaffold00117 51525 1 G A scaffold7513 ScafM INDEL 0030.scaffold00117 51547 1 T . scaffold7513 ScafM SNP 0030.scaffold00117 51554 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 51638 1 A T scaffold7513 ScafM INDEL 0030.scaffold00117 51691 2 AA .. scaffold7513 ScafM SNP 0030.scaffold00117 51727 1 T A scaffold7513 ScafM SNP 0030.scaffold00117 51754 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 52101 1 A G scaffold7513 ScafM SNP 0030.scaffold00117 52164 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 52399 1 C A scaffold7513 ScafM SNP 0030.scaffold00117 52464 1 G T scaffold7513 ScafM INDEL 0030.scaffold00117 52570 1 . A scaffold7513 ScafM SNP 0030.scaffold00117 52804 1 G T scaffold7513 ScafM INDEL 0030.scaffold00117 52822 2 CA .T scaffold7513 ReadM SNP 0030.scaffold00117 52938 1 A C - ReadM SNP 0030.scaffold00117 53147 1 A G - ReadM SNP 0030.scaffold00117 53172 1 A G - ReadM SNP 0030.scaffold00117 53283 1 T C - ReadM SNP 0030.scaffold00117 53306 1 T C - ReadM SNP 0030.scaffold00117 53382 1 A G - ReadM SNP 0030.scaffold00117 53561 1 G A - ReadM SNP 0030.scaffold00117 53669 1 C T - ReadM SNP 0030.scaffold00117 53867 2 TT CA - ScafM INDEL 0030.scaffold00117 54020 4 TTTT .... scaffold7513 ReadM SNP 0030.scaffold00117 54293 1 A G - ReadM SNP 0030.scaffold00117 54532 1 T C - ReadM SNP 0030.scaffold00117 54575 1 C T - ReadM SNP 0030.scaffold00117 54620 1 A G - ReadM SNP 0030.scaffold00117 54709 1 T C - ReadM SNP 0030.scaffold00117 54847 1 T G - ReadM SNP 0030.scaffold00117 55020 2 TT AC - ReadM SNP 0030.scaffold00117 55143 1 A G - ReadM SNP 0030.scaffold00117 55162 1 G A - ReadM SNP 0030.scaffold00117 55215 1 G A - ReadM SNP 0030.scaffold00117 55278 1 A G - ReadM SNP 0030.scaffold00117 55313 1 C T - ReadM SNP 0030.scaffold00117 55346 1 G A - ReadM SNP 0030.scaffold00117 55354 1 A T - ReadM SNP 0030.scaffold00117 55418 1 C T - ReadM SNP 0030.scaffold00117 55521 1 T C - ReadM SNP 0030.scaffold00117 55538 1 C A - ReadM SNP 0030.scaffold00117 55563 1 A G - ReadM SNP 0030.scaffold00117 55589 1 G A - ReadM INDEL 0030.scaffold00117 55647 1 A . - ReadM SNP 0030.scaffold00117 55779 1 G T - ReadM SNP 0030.scaffold00117 55937 1 G A - ReadM SNP 0030.scaffold00117 55943 1 C T - ReadM SNP 0030.scaffold00117 55962 1 A G - ReadM SNP 0030.scaffold00117 55986 1 T G - ReadM SNP 0030.scaffold00117 56012 1 T C - Both SNP 0030.scaffold00117 56266 1 C A scaffold7513 Both SNP 0030.scaffold00117 56330 1 C T scaffold7513 Both SNP 0030.scaffold00117 56416 1 A G scaffold7513 Both SNP 0030.scaffold00117 56418 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 56467 1 T A scaffold7513 ScafM SNP 0030.scaffold00117 56474 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 56486 1 G A scaffold7513 Both SNP 0030.scaffold00117 56499 1 A C scaffold7513 Both SNP 0030.scaffold00117 56562 1 T C scaffold7513 Both SNP 0030.scaffold00117 56680 1 A G scaffold7513 Both SNP 0030.scaffold00117 56733 1 T C scaffold7513 Both SNP 0030.scaffold00117 56767 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 56790 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 56793 1 G C scaffold7513 ScafM SNP 0030.scaffold00117 56826 2 TA AT scaffold7513 ScafM SNP 0030.scaffold00117 56901 1 A C scaffold7513 ScafM SNP 0030.scaffold00117 56918 1 C T scaffold7513 Both SNP 0030.scaffold00117 56944 1 A G scaffold7513 Both SNP 0030.scaffold00117 56958 1 T G scaffold7513 ScafM INDEL 0030.scaffold00117 57015 4 GCAT .... scaffold7513 ReadM SNP 0030.scaffold00117 57078 1 C T - ReadM SNP 0030.scaffold00117 57102 1 G C - ReadM SNP 0030.scaffold00117 57126 1 C G - ReadM INDEL 0030.scaffold00117 57144 1 C . - ReadM SNP 0030.scaffold00117 57210 1 T C - ReadM SNP 0030.scaffold00117 57270 1 T C - ReadM SNP 0030.scaffold00117 57276 1 G T - ReadM INDEL 0030.scaffold00117 57446 1 . A - ReadM SNP 0030.scaffold00117 57478 1 A G - ReadM SNP 0030.scaffold00117 57490 1 A G - ReadM SNP 0030.scaffold00117 57637 1 G A - ReadM SNP 0030.scaffold00117 57715 1 T G - ReadM SNP 0030.scaffold00117 59221 1 C T - ReadM SNP 0030.scaffold00117 59234 1 T C - ReadM SNP 0030.scaffold00117 59243 1 A G - ReadM SNP 0030.scaffold00117 59297 1 C T - ReadM SNP 0030.scaffold00117 59363 1 C T - ReadM SNP 0030.scaffold00117 59431 1 C T - ReadM SNP 0030.scaffold00117 59482 1 A G - ReadM SNP 0030.scaffold00117 59527 1 A G - ReadM SNP 0030.scaffold00117 59628 1 A G - ReadM SNP 0030.scaffold00117 59766 1 A T - ReadM SNP 0030.scaffold00117 59870 1 G A - ReadM SNP 0030.scaffold00117 59913 1 A G - ReadM SNP 0030.scaffold00117 60006 1 A G - ReadM SNP 0030.scaffold00117 60049 1 C T - ReadM SNP 0030.scaffold00117 60102 1 C T - ReadM SNP 0030.scaffold00117 60184 1 G A - ReadM INDEL 0030.scaffold00117 60219 1 . C - ReadM SNP 0030.scaffold00117 60255 1 T A - ReadM SNP 0030.scaffold00117 60284 1 C T - ScafM SNP 0030.scaffold00117 65162 1 A T scaffold7513 ScafM SNP 0030.scaffold00117 65185 1 G C scaffold7513 ReadM SNP 0030.scaffold00117 65387 1 A G - ReadM SNP 0030.scaffold00117 65402 1 G A - ReadM SNP 0030.scaffold00117 65414 1 C T - ScafM SNP 0030.scaffold00117 65692 1 T C scaffold7513 ScafM SNP 0030.scaffold00117 65705 1 C T scaffold7513 ScafM SNP 0030.scaffold00117 66482 1 G A scaffold7513 ScafM SNP 0030.scaffold00117 66566 1 A G scaffold7513 ReadM SNP 0030.scaffold00117 70575 1 T G - ReadM SNP 0030.scaffold00117 70642 1 A T - ReadM SNP 0030.scaffold00117 72094 1 T C - ReadM SNP 0030.scaffold00117 72105 1 T A - ReadM SNP 0030.scaffold00117 72121 1 G A - ReadM SNP 0030.scaffold00117 72196 1 G C - ReadM SNP 0030.scaffold00117 72214 1 T G - ReadM SNP 0030.scaffold00117 72361 1 T G - ReadM SNP 0030.scaffold00117 72446 1 G A - ReadM SNP 0030.scaffold00117 72823 1 A G - ReadM SNP 0030.scaffold00117 72978 1 C T - ReadM SNP 0030.scaffold00117 73371 1 A G - ReadM SNP 0030.scaffold00117 73443 1 A G - ReadM SNP 0030.scaffold00117 73520 1 A G - ReadM SNP 0030.scaffold00117 73592 1 C T - ReadM SNP 0030.scaffold00117 73870 1 T C - ReadM SNP 0030.scaffold00117 76369 1 C G - ReadM INDEL 0030.scaffold00117 76420 1 T . - ReadM SNP 0030.scaffold00117 76688 1 C T - ReadM SNP 0030.scaffold00117 76701 1 T C - ReadM SNP 0030.scaffold00117 81271 1 T A - ReadM SNP 0030.scaffold00117 81350 1 A G - ReadM SNP 0030.scaffold00117 81587 1 C T - ReadM SNP 0030.scaffold00117 81895 1 T G - ReadM SNP 0030.scaffold00117 82000 1 A C - ReadM SNP 0030.scaffold00117 82003 1 A C - ReadM SNP 0030.scaffold00117 82036 1 T C - ReadM SNP 0030.scaffold00117 82094 1 G C - ReadM SNP 0030.scaffold00117 82263 1 C T - ReadM SNP 0030.scaffold00117 82355 1 C A - ReadM SNP 0030.scaffold00117 82366 1 C T - ReadM SNP 0030.scaffold00117 82369 1 A T - ReadM SNP 0030.scaffold00117 82475 1 T G - ReadM SNP 0030.scaffold00117 82482 1 G A - ReadM SNP 0030.scaffold00117 82620 1 A G - ReadM SNP 0030.scaffold00117 82825 1 T A - ReadM SNP 0030.scaffold00117 82904 1 T C - ReadM SNP 0030.scaffold00117 82934 1 A G - ReadM SNP 0030.scaffold00117 83266 1 A G - ReadM SNP 0030.scaffold00117 83274 1 A T - ReadM SNP 0030.scaffold00117 83886 1 G C - ReadM SNP 0030.scaffold00117 84383 1 T C - ReadM SNP 0030.scaffold00117 84513 1 T C - ReadM SNP 0030.scaffold00117 84786 1 T C - ReadM INDEL 0030.scaffold00117 84811 1 . A - ReadM SNP 0030.scaffold00117 84871 1 G A - ReadM SNP 0030.scaffold00117 84921 1 C T - ScafM SNP 0030.scaffold00117 84971 2 TA AC scaffold8250 ScafM SNP 0030.scaffold00117 85094 2 CC AT scaffold8250 ScafM SNP 0030.scaffold00117 85149 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 85157 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 85167 1 A G scaffold8250 ScafM SNP 0030.scaffold00117 85190 1 C T scaffold8250 ScafM SNP 0030.scaffold00117 85206 1 T C scaffold8250 ScafM INDEL 0030.scaffold00117 85307 1 G . scaffold8250 ScafM SNP 0030.scaffold00117 85361 1 C T scaffold8250 ScafM SNP 0030.scaffold00117 85448 1 C T scaffold8250 ReadM SNP 0030.scaffold00117 85627 1 G C - ReadM SNP 0030.scaffold00117 86072 1 G C - ReadM INDEL 0030.scaffold00117 86192 1 . T - ScafM SNP 0030.scaffold00117 86408 1 A G scaffold8250 ScafM SNP 0030.scaffold00117 86410 1 T C scaffold8250 ScafM SNP 0030.scaffold00117 86416 1 C A scaffold8250 Both SNP 0030.scaffold00117 86571 1 G A scaffold8250 Both SNP 0030.scaffold00117 86583 1 T C scaffold8250 ScafM SNP 0030.scaffold00117 86833 1 A G scaffold8250 ScafM SNP 0030.scaffold00117 86840 2 GA AG scaffold8250 ScafM SNP 0030.scaffold00117 86849 1 C G scaffold8250 ScafM SNP 0030.scaffold00117 86860 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 86889 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 86898 2 TT AA scaffold8250 ScafM SNP 0030.scaffold00117 86903 1 A G scaffold8250 ScafM SNP 0030.scaffold00117 86911 1 C T scaffold8250 ScafM SNP 0030.scaffold00117 86922 1 C T scaffold8250 Both SNP 0030.scaffold00117 86967 1 A C scaffold8250 ScafM SNP 0030.scaffold00117 87009 2 TA GT scaffold8250 Both SNP 0030.scaffold00117 87104 1 T C scaffold8250 Both SNP 0030.scaffold00117 87149 1 G T scaffold8250 ReadM SNP 0030.scaffold00117 87326 1 A G - ScafM SNP 0030.scaffold00117 87375 1 G C scaffold4522 ScafM SNP 0030.scaffold00117 87409 1 C T scaffold4522 ScafM SNP 0030.scaffold00117 87434 1 C A scaffold4522 ScafM SNP 0030.scaffold00117 87494 2 CT TA scaffold4522 ScafM SNP 0030.scaffold00117 87536 1 T C scaffold4522 Both SNP 0030.scaffold00117 87578 1 T G scaffold4522 ScafM SNP 0030.scaffold00117 87624 1 C T scaffold4522 ScafM SNP 0030.scaffold00117 87737 1 T A scaffold4522 Both SNP 0030.scaffold00117 87747 1 A T scaffold4522 Both SNP 0030.scaffold00117 87762 1 T C scaffold4522 ReadM SNP 0030.scaffold00117 88529 1 T C - ReadM SNP 0030.scaffold00117 89536 1 T C - ReadM SNP 0030.scaffold00117 89546 1 C A - ReadM SNP 0030.scaffold00117 89805 1 A C - ScafM SNP 0030.scaffold00117 94147 1 C T scaffold8250 ScafM SNP 0030.scaffold00117 94151 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 94202 1 A G scaffold8250 ScafM SNP 0030.scaffold00117 94255 1 T A scaffold8250 ScafM SNP 0030.scaffold00117 94286 1 G A scaffold8250 ScafM SNP 0030.scaffold00117 94431 1 T A scaffold8250 ScafM SNP 0030.scaffold00117 94458 1 T C scaffold8250 ScafM SNP 0030.scaffold00117 94477 1 C T scaffold8250 Both SNP 0030.scaffold00117 94523 1 G A scaffold8250 Both SNP 0030.scaffold00117 94554 1 A C scaffold8250 ScafM SNP 0030.scaffold00117 94623 2 AC CT scaffold8250 ScafM SNP 0030.scaffold00117 94697 1 C A scaffold8250 ScafM SNP 0030.scaffold00117 94789 1 C A scaffold8250 ScafM SNP 0030.scaffold00117 94825 1 A T scaffold8250 ScafM SNP 0030.scaffold00117 94864 1 C T scaffold8250 ScafM SNP 0030.scaffold00117 94870 1 T A scaffold8250 ScafM SNP 0030.scaffold00117 94961 1 T A scaffold8250 Both SNP 0030.scaffold00117 94976 1 T C scaffold8250 ReadM SNP 0030.scaffold00117 95239 1 T C - ReadM SNP 0030.scaffold00117 95254 1 C T - ReadM SNP 0030.scaffold00117 95453 1 A G - ReadM SNP 0030.scaffold00117 96048 1 G T - ReadM SNP 0030.scaffold00117 96052 1 A G - ReadM SNP 0030.scaffold00117 96088 1 G T - ReadM SNP 0030.scaffold00117 96144 1 G T - ReadM SNP 0030.scaffold00117 96246 1 T A - ReadM SNP 0030.scaffold00117 96311 1 A G - ReadM SNP 0030.scaffold00117 96417 1 A T - ReadM SNP 0030.scaffold00117 96479 1 G C - ReadM SNP 0030.scaffold00117 96506 1 T C - ReadM SNP 0030.scaffold00117 96552 1 C T - ReadM SNP 0030.scaffold00117 96844 1 G A - ReadM INDEL 0030.scaffold00117 96905 1 . G - ReadM SNP 0030.scaffold00117 96963 1 G A - ReadM SNP 0030.scaffold00117 96998 1 G A - ReadM SNP 0030.scaffold00117 97049 1 C G - ReadM SNP 0030.scaffold00117 97116 1 G A - ReadM SNP 0030.scaffold00117 97201 1 C T - ReadM SNP 0030.scaffold00117 97231 1 A T - ReadM SNP 0030.scaffold00117 97262 1 A G - ReadM SNP 0030.scaffold00117 97298 1 C T - ReadM SNP 0030.scaffold00117 97348 1 T G - ReadM SNP 0030.scaffold00117 97392 1 C T - ReadM SNP 0030.scaffold00117 97481 1 G C - ReadM SNP 0030.scaffold00117 97587 1 G A - ReadM SNP 0030.scaffold00117 97608 1 T C - ReadM SNP 0030.scaffold00117 97774 1 C A - ReadM SNP 0030.scaffold00117 97858 1 A G - ReadM SNP 0030.scaffold00117 97918 1 C T - ReadM SNP 0030.scaffold00117 97976 1 A T - ReadM SNP 0030.scaffold00117 98024 1 C T - ReadM SNP 0030.scaffold00117 98205 1 T C - ReadM SNP 0030.scaffold00117 98232 1 A G - ReadM INDEL 0030.scaffold00117 98407 2 .. AA - ReadM SNP 0030.scaffold00117 98540 2 GG TA - ReadM SNP 0030.scaffold00117 98914 1 T A - ReadM SNP 0030.scaffold00117 98946 1 C T - ReadM SNP 0030.scaffold00117 98966 1 G C - ReadM SNP 0030.scaffold00117 99176 1 T G - ReadM SNP 0030.scaffold00117 99214 1 C A - ReadM SNP 0030.scaffold00117 99338 1 G T - ReadM SNP 0030.scaffold00117 99458 1 G T - ReadM SNP 0030.scaffold00117 99479 1 T A - ReadM SNP 0030.scaffold00117 99558 1 T C - ReadM SNP 0030.scaffold00117 99607 1 C A - ReadM SNP 0030.scaffold00117 99621 1 T C - ReadM SNP 0030.scaffold00117 103176 1 G A - ReadM SNP 0030.scaffold00117 103282 1 A G - ReadM SNP 0030.scaffold00117 103320 1 T A - ReadM SNP 0030.scaffold00117 103340 1 T C - ReadM SNP 0030.scaffold00117 103652 1 C T - ReadM SNP 0030.scaffold00117 103696 1 C T - ReadM SNP 0030.scaffold00117 103733 1 T C - ReadM SNP 0030.scaffold00117 103907 1 T C - ReadM INDEL 0030.scaffold00117 103937 1 C . - ReadM SNP 0030.scaffold00117 103963 1 G A - ReadM SNP 0030.scaffold00117 104060 1 T A - ReadM SNP 0030.scaffold00117 104098 1 A G - ReadM SNP 0030.scaffold00117 104252 1 T C - ReadM SNP 0030.scaffold00117 104498 1 G A - ReadM SNP 0030.scaffold00117 104501 1 C T - ReadM INDEL 0030.scaffold00117 104565 1 G . - ReadM SNP 0030.scaffold00117 104578 1 C T - ReadM SNP 0030.scaffold00117 106548 1 T A - ReadM SNP 0030.scaffold00117 106672 1 G A - ReadM SNP 0030.scaffold00117 106702 1 G A - ScafM SNP 0030.scaffold00117 107156 1 T C scaffold32226 ScafM INDEL 0030.scaffold00117 107253 1 G . scaffold32226 ScafM SNP 0030.scaffold00117 107279 1 G C scaffold32226 ScafM INDEL 0030.scaffold00117 107282 5 ..... TTTTT scaffold32226 ScafM SNP 0030.scaffold00117 107284 1 A T scaffold32226 ScafM SNP 0030.scaffold00117 107296 1 C T scaffold32226 ReadM SNP 0030.scaffold00117 107771 1 T G - Both SNP 0030.scaffold00117 107865 1 T C scaffold32226 Both SNP 0030.scaffold00117 107889 1 G A scaffold32226 Both SNP 0030.scaffold00117 107975 1 G A scaffold32226 Both SNP 0030.scaffold00117 108012 1 C T scaffold32226 Both SNP 0030.scaffold00117 108041 1 G T scaffold32226 Both SNP 0030.scaffold00117 108059 1 C G scaffold32226 Both SNP 0030.scaffold00117 108144 1 A C scaffold32226 Both SNP 0030.scaffold00117 108148 1 A T scaffold32226 Both SNP 0030.scaffold00117 108158 1 G T scaffold32226 ReadM SNP 0030.scaffold00117 108491 1 A T - ReadM SNP 0030.scaffold00117 108570 1 G A - ReadM SNP 0030.scaffold00117 108604 1 T A - ReadM INDEL 0030.scaffold00117 108682 1 T . - ReadM SNP 0030.scaffold00117 108788 1 G T - ReadM INDEL 0030.scaffold00117 108807 1 A . - ReadM SNP 0030.scaffold00117 108845 1 G C - ReadM SNP 0030.scaffold00117 108975 1 A G - ReadM SNP 0030.scaffold00117 109195 1 A T - ReadM SNP 0030.scaffold00117 109255 1 C T - ReadM SNP 0030.scaffold00117 109269 1 C T - ReadM SNP 0030.scaffold00117 109362 1 G A - ReadM INDEL 0030.scaffold00117 109404 1 . A - ReadM SNP 0030.scaffold00117 109441 1 G A - ReadM SNP 0030.scaffold00117 109474 1 A T - ReadM SNP 0030.scaffold00117 109678 1 A T - ReadM SNP 0030.scaffold00117 109715 1 G T - Both SNP 0030.scaffold00117 109842 1 A G scaffold32226 Both SNP 0030.scaffold00117 109862 1 A G scaffold32226 Both SNP 0030.scaffold00117 109973 1 T A scaffold32226 ReadM SNP 0030.scaffold00117 110235 1 T C - ReadM INDEL 0030.scaffold00117 110239 1 T . - ReadM SNP 0030.scaffold00117 110688 1 A G - ReadM SNP 0030.scaffold00117 110705 1 G T - ReadM INDEL 0030.scaffold00117 110733 1 A . - ReadM SNP 0030.scaffold00117 110783 1 C G - ScafM SNP 0030.scaffold00117 112568 1 A G scaffold32226 ScafM INDEL 0030.scaffold00117 112605 2 AA .. scaffold32226 ScafM INDEL 0030.scaffold00117 113358 48 TACAAACACCAACATCAACAAAGTTGCCTGCCTAATAACAGAACAACC ................................................ scaffold32226 ScafM INDEL 0030.scaffold00117 113410 5 CACCC ..... scaffold32226 ScafM SNP 0030.scaffold00117 113439 1 C T scaffold32226 ScafM SNP 0030.scaffold00117 113492 1 T C scaffold32226 ReadM SNP 0030.scaffold00117 127540 1 G A - ReadM SNP 0030.scaffold00117 127616 1 T C - ReadM SNP 0030.scaffold00117 127817 1 C T - ReadM SNP 0030.scaffold00117 127850 1 T A - ReadM SNP 0030.scaffold00117 127912 1 T C - ReadM SNP 0030.scaffold00117 128207 1 T G - ReadM SNP 0030.scaffold00117 128356 1 T C - ReadM SNP 0030.scaffold00117 128375 1 T C - ReadM SNP 0030.scaffold00117 128441 1 T C - ReadM SNP 0030.scaffold00117 128477 1 T A - ReadM SNP 0030.scaffold00117 128489 1 C T - ReadM SNP 0030.scaffold00117 128508 1 G A - ReadM SNP 0030.scaffold00117 128546 1 A G - ReadM SNP 0030.scaffold00117 128621 1 G A - ReadM SNP 0030.scaffold00117 128642 1 T C - ReadM SNP 0030.scaffold00117 128817 1 A G - ReadM SNP 0030.scaffold00117 128992 1 A C - ReadM SNP 0030.scaffold00117 129078 1 A C - ReadM SNP 0030.scaffold00117 129143 1 G T - ReadM SNP 0030.scaffold00117 129161 1 A C - ReadM SNP 0030.scaffold00117 129184 1 T C - ReadM SNP 0030.scaffold00117 129211 1 A G - ReadM SNP 0030.scaffold00117 129235 1 C T - ReadM SNP 0030.scaffold00117 129276 1 A G - ReadM SNP 0030.scaffold00117 129421 1 C T - ReadM SNP 0030.scaffold00117 129426 1 G A - Both SNP 0030.scaffold00117 129456 1 C T scaffold43937 ScafM INDEL 0030.scaffold00117 129477 5 GTCTA ..... scaffold43937 ScafM SNP 0030.scaffold00117 129491 1 A G scaffold43937 ScafM SNP 0030.scaffold00117 129498 1 C A scaffold43937 ReadM SNP 0030.scaffold00117 129576 1 T C - Both SNP 0030.scaffold00117 129613 1 C T scaffold21894 Both SNP 0030.scaffold00117 129630 1 A T scaffold21894 ScafM SNP 0030.scaffold00117 129639 1 T G scaffold21894 ScafM SNP 0030.scaffold00117 129710 2 AT CA scaffold21894 ReadM SNP 0030.scaffold00117 129791 1 T C - ReadM SNP 0030.scaffold00117 129867 1 A C - ReadM SNP 0030.scaffold00117 129912 1 G A - ReadM SNP 0030.scaffold00117 130104 1 T C - ReadM SNP 0030.scaffold00117 130142 1 G T - ReadM SNP 0030.scaffold00117 130246 1 A G - ReadM SNP 0030.scaffold00117 130262 1 G A - ReadM SNP 0030.scaffold00117 130275 1 G A - ReadM SNP 0030.scaffold00117 130297 1 T C - ReadM SNP 0030.scaffold00117 130371 1 C T - ReadM INDEL 0030.scaffold00117 130428 3 ... ATC - ReadM SNP 0030.scaffold00117 130475 1 G A - Both SNP 0030.scaffold00117 130562 1 A C scaffold17614 ScafM SNP 0030.scaffold00117 130570 1 T A scaffold17614 ScafM SNP 0030.scaffold00117 130576 1 C G scaffold17614 ScafM SNP 0030.scaffold00117 130578 1 G T scaffold17614 ScafM SNP 0030.scaffold00117 130598 1 C T scaffold17614 ScafM SNP 0030.scaffold00117 130613 1 A T scaffold17614 ScafM SNP 0030.scaffold00117 130635 1 G T scaffold17614 ScafM SNP 0030.scaffold00117 130648 1 T C scaffold17614 ScafM SNP 0030.scaffold00117 130668 1 T G scaffold17614 ScafM SNP 0030.scaffold00117 130678 1 T C scaffold17614 ScafM SNP 0030.scaffold00117 130688 1 A G scaffold17614 ScafM INDEL 0030.scaffold00117 130705 3 TGA ... scaffold17614 ReadM SNP 0030.scaffold00117 130767 1 T C - ReadM SNP 0030.scaffold00117 130825 2 GG AC - ReadM SNP 0030.scaffold00117 130910 1 A T - ReadM SNP 0030.scaffold00117 130927 1 T A - ReadM SNP 0030.scaffold00117 130986 1 T A - ReadM SNP 0030.scaffold00117 131000 1 G C - Both SNP 0030.scaffold00117 131138 1 C T scaffold17614 Both SNP 0030.scaffold00117 131163 1 C A scaffold17614 ScafM SNP 0030.scaffold00117 131508 1 A T scaffold17614 ScafM SNP 0030.scaffold00117 131546 1 A T scaffold17614 ScafM SNP 0030.scaffold00117 131652 1 C T scaffold17614 ScafM SNP 0030.scaffold00117 131672 1 C T scaffold17614 ScafM SNP 0030.scaffold00117 131686 1 C T scaffold17614 ScafM INDEL 0030.scaffold00117 131690 1 A . scaffold17614 ScafM SNP 0030.scaffold00117 131697 1 A G scaffold17614 ScafM SNP 0030.scaffold00117 131712 1 A G scaffold17614 ScafM SNP 0030.scaffold00117 131824 1 G C scaffold32226 ScafM SNP 0030.scaffold00117 131854 1 A G scaffold32226 ScafM SNP 0030.scaffold00117 131894 1 T C scaffold32226 ScafM SNP 0030.scaffold00117 132068 1 C A scaffold32226 ScafM SNP 0030.scaffold00117 132149 1 G T scaffold32226 Both SNP 0030.scaffold00117 132221 1 C G scaffold32226 ReadM SNP 0030.scaffold00117 132339 1 T C - Both SNP 0030.scaffold00117 132442 1 C A scaffold32226 ReadM SNP 0030.scaffold00117 132469 1 C T - ReadM SNP 0030.scaffold00117 132533 1 C T - ReadM SNP 0030.scaffold00117 132563 1 A G - ReadM INDEL 0030.scaffold00117 132568 1 C . - ReadM SNP 0030.scaffold00117 132768 1 G T - Both SNP 0030.scaffold00117 132920 1 C T scaffold32226 Both SNP 0030.scaffold00117 132992 1 A T scaffold32226 Both SNP 0030.scaffold00117 133013 1 G A scaffold32226 ReadM SNP 0030.scaffold00117 133828 1 T A - ReadM SNP 0030.scaffold00117 133981 1 G A - ReadM INDEL 0030.scaffold00117 134359 1 . G - ReadM SNP 0030.scaffold00117 134465 1 C G - ReadM INDEL 0030.scaffold00117 134534 1 A . - ReadM SNP 0030.scaffold00117 134599 1 G A - ReadM SNP 0030.scaffold00117 134604 1 G A - ReadM SNP 0030.scaffold00117 134633 1 G A - ReadM SNP 0030.scaffold00117 134712 1 T C - ReadM SNP 0030.scaffold00117 134767 1 T A - ReadM SNP 0030.scaffold00117 134818 1 G A - ReadM SNP 0030.scaffold00117 134882 1 C T - ReadM SNP 0030.scaffold00117 134906 1 G A - ReadM SNP 0030.scaffold00117 134958 1 C T - ReadM SNP 0030.scaffold00117 134980 1 T C - ReadM SNP 0030.scaffold00117 135033 1 G A - ReadM SNP 0030.scaffold00117 135167 1 A G - ReadM SNP 0030.scaffold00117 135222 1 A T - Both SNP 0030.scaffold00117 135254 1 T C scaffold32226 Both SNP 0030.scaffold00117 135266 1 G C scaffold32226 Both SNP 0030.scaffold00117 135333 1 T G scaffold32226 ScafM INDEL 0030.scaffold00117 135412 4 ATAA .... scaffold32226 ScafM SNP 0030.scaffold00117 135439 1 G C scaffold32226 ScafM INDEL 0030.scaffold00117 135482 4 .... TCGA scaffold32226 ScafM INDEL 0030.scaffold00117 135582 1 . A scaffold32226 ScafM SNP 0030.scaffold00117 135641 1 T G scaffold32226 ScafM INDEL 0030.scaffold00117 135657 4 TCGA .... scaffold32226 ScafM INDEL 0030.scaffold00117 135692 1 . C scaffold32226 ScafM INDEL 0030.scaffold00117 135728 1 T . scaffold32226 ScafM SNP 0030.scaffold00117 135740 1 A G scaffold32226 Both SNP 0030.scaffold00117 137361 1 A G scaffold9623 Both SNP 0030.scaffold00117 137382 1 A C scaffold9623 Both SNP 0030.scaffold00117 137412 1 G A scaffold9623 Both SNP 0030.scaffold00117 137422 1 T A scaffold9623 ReadM SNP 0030.scaffold00117 137736 1 G C - ReadM SNP 0030.scaffold00117 137811 1 A G - ReadM SNP 0030.scaffold00117 137816 1 G A - ReadM SNP 0030.scaffold00117 137853 1 A G - ReadM SNP 0030.scaffold00117 137901 1 A T - ReadM INDEL 0030.scaffold00117 137975 3 ... AGA - ReadM SNP 0030.scaffold00117 138062 1 C T - ReadM SNP 0030.scaffold00117 138086 1 T C - ScafM SNP 0030.scaffold00117 142027 1 A G scaffold4823 ScafM SNP 0030.scaffold00117 142062 1 T C scaffold4823 ScafM INDEL 0030.scaffold00117 142094 1 . C scaffold4823 ReadM SNP 0030.scaffold00117 144011 1 A C - ReadM SNP 0030.scaffold00117 144233 1 G T - ReadM SNP 0030.scaffold00117 144247 1 T C - ReadM SNP 0030.scaffold00117 144277 1 G A - ReadM SNP 0030.scaffold00117 144327 1 G A - ReadM SNP 0030.scaffold00117 144430 1 C A - ReadM SNP 0030.scaffold00117 144447 1 G C - ReadM SNP 0030.scaffold00117 144745 1 C T - ReadM SNP 0030.scaffold00117 144792 1 G A - ReadM SNP 0030.scaffold00117 144798 1 T C - ReadM SNP 0030.scaffold00117 144868 1 T A - ReadM SNP 0030.scaffold00117 144975 1 C T - ReadM SNP 0030.scaffold00117 144984 1 C T - ReadM SNP 0030.scaffold00117 144993 1 C T - ReadM SNP 0030.scaffold00117 145266 1 C G - ReadM SNP 0030.scaffold00117 145323 1 T A - ReadM SNP 0030.scaffold00117 145460 1 A G - ReadM SNP 0030.scaffold00117 145510 1 C G - ReadM SNP 0030.scaffold00117 145528 1 A G - ReadM SNP 0030.scaffold00117 145552 1 A G - ReadM SNP 0030.scaffold00117 145600 1 C T - ReadM SNP 0030.scaffold00117 145662 1 C T - ReadM SNP 0030.scaffold00117 145693 1 T C - ReadM SNP 0030.scaffold00117 145698 1 T C - ReadM SNP 0030.scaffold00117 145739 1 C T - ReadM SNP 0030.scaffold00117 145849 1 A C - ReadM SNP 0030.scaffold00117 145853 1 C A - ReadM SNP 0030.scaffold00117 145926 1 G T - ReadM SNP 0030.scaffold00117 146033 1 T A - ReadM SNP 0030.scaffold00117 146070 1 T C - ReadM SNP 0030.scaffold00117 146152 1 C G - ReadM SNP 0030.scaffold00117 146240 1 A G - ReadM SNP 0030.scaffold00117 146250 1 C T - ReadM SNP 0030.scaffold00117 146256 1 A G - ReadM SNP 0030.scaffold00117 146287 1 T A - ReadM SNP 0030.scaffold00117 146318 1 A C - ReadM SNP 0030.scaffold00117 146340 1 G C - ReadM INDEL 0030.scaffold00117 146379 1 C . - ReadM SNP 0030.scaffold00117 146410 1 A G - ReadM SNP 0030.scaffold00117 146428 1 C T - ReadM SNP 0030.scaffold00117 146520 1 T C - ReadM SNP 0030.scaffold00117 146647 1 A C - ReadM SNP 0030.scaffold00117 146686 1 A G - ReadM SNP 0030.scaffold00117 146728 1 C T - ReadM SNP 0030.scaffold00117 147031 1 A G - ReadM SNP 0030.scaffold00117 147049 1 T A - ReadM SNP 0030.scaffold00117 147052 1 C T - ReadM SNP 0030.scaffold00117 147111 1 C T - ReadM SNP 0030.scaffold00117 147121 1 A G - ReadM SNP 0030.scaffold00117 147184 1 C A - ReadM SNP 0030.scaffold00117 147218 1 A C - ReadM SNP 0030.scaffold00117 147301 1 C A - ReadM SNP 0030.scaffold00117 147359 1 T G - ReadM SNP 0030.scaffold00117 147389 1 A G - ReadM SNP 0030.scaffold00117 147404 1 A C - ReadM SNP 0030.scaffold00117 147412 1 A G - ReadM SNP 0030.scaffold00117 147448 1 T C - ReadM SNP 0030.scaffold00117 147530 1 G T - ReadM SNP 0030.scaffold00117 148009 1 A T - ReadM SNP 0030.scaffold00117 148049 1 A G - ReadM SNP 0030.scaffold00117 148075 1 T C - ReadM SNP 0030.scaffold00117 148089 1 G A - ReadM SNP 0030.scaffold00117 148493 1 A T - ReadM SNP 0030.scaffold00117 148497 1 G T - ReadM SNP 0030.scaffold00117 148511 1 G A - ReadM SNP 0030.scaffold00117 148599 1 G T - ReadM SNP 0030.scaffold00117 148640 1 A G - ReadM SNP 0030.scaffold00117 148811 1 C T - ReadM SNP 0030.scaffold00117 148829 1 T C - ReadM SNP 0030.scaffold00117 148897 1 A C - ReadM SNP 0030.scaffold00117 148931 1 A C - ReadM SNP 0030.scaffold00117 148971 1 T G - ReadM SNP 0030.scaffold00117 148983 1 C T - ReadM SNP 0030.scaffold00117 149069 1 A G - ReadM SNP 0030.scaffold00117 149105 1 C T - ReadM SNP 0030.scaffold00117 149291 1 G A - ReadM SNP 0030.scaffold00117 149313 1 T C - ReadM SNP 0030.scaffold00117 149317 1 C T - ReadM SNP 0030.scaffold00117 149460 1 C G - ReadM SNP 0030.scaffold00117 149471 1 T A - ReadM SNP 0030.scaffold00117 149496 1 T C - ReadM SNP 0030.scaffold00117 149618 1 A G - ReadM SNP 0030.scaffold00117 149641 1 T G - ReadM SNP 0030.scaffold00117 149741 1 A T - ReadM SNP 0030.scaffold00117 149798 1 T C - ReadM SNP 0030.scaffold00117 149810 1 C A - ReadM SNP 0030.scaffold00117 149818 1 T C - ReadM SNP 0030.scaffold00117 149861 1 G T - ReadM SNP 0030.scaffold00117 149911 1 G A - ReadM SNP 0030.scaffold00117 149964 1 C A - ReadM SNP 0030.scaffold00117 150002 1 C G - ReadM SNP 0030.scaffold00117 150150 1 A C - ReadM SNP 0030.scaffold00117 150152 1 C T - ReadM SNP 0030.scaffold00117 150221 1 C G - ReadM SNP 0030.scaffold00117 150277 1 C T - ReadM SNP 0030.scaffold00117 150296 1 A G - ReadM SNP 0030.scaffold00117 150355 1 C A - ReadM SNP 0030.scaffold00117 150431 1 G A - ReadM SNP 0030.scaffold00117 150752 1 C T - ReadM SNP 0030.scaffold00117 150767 1 A T - ReadM SNP 0030.scaffold00117 150784 1 G A - ReadM SNP 0030.scaffold00117 150917 1 G C - ReadM SNP 0030.scaffold00117 150924 1 G T - ReadM SNP 0030.scaffold00117 150947 1 G T - ReadM SNP 0030.scaffold00117 151025 1 G A - ReadM SNP 0030.scaffold00117 151211 1 C T - ReadM SNP 0030.scaffold00117 151265 1 A G - ReadM SNP 0030.scaffold00117 151343 1 T G - ReadM SNP 0030.scaffold00117 151351 1 G A - ReadM SNP 0030.scaffold00117 151487 1 T C - ReadM SNP 0030.scaffold00117 151525 1 A G - ScafM SNP 0030.scaffold00117 152394 1 C G scaffold9623 ScafM SNP 0030.scaffold00117 152429 1 C G scaffold9623 ScafM SNP 0030.scaffold00117 152460 1 T C scaffold9623 ScafM INDEL 0030.scaffold00117 152481 1 C . scaffold9623 ReadM SNP 0030.scaffold00117 152498 1 T G - ReadM SNP 0030.scaffold00117 152538 1 T C - ReadM SNP 0030.scaffold00117 152701 1 T C - ReadM INDEL 0030.scaffold00117 152813 1 C . - ReadM SNP 0030.scaffold00117 152928 1 G T - ReadM SNP 0030.scaffold00117 152952 1 T C - ReadM SNP 0030.scaffold00117 152967 1 A G - ReadM SNP 0030.scaffold00117 152992 1 T A - ReadM SNP 0030.scaffold00117 153049 1 G T - ReadM SNP 0030.scaffold00117 153057 1 A C - ReadM SNP 0030.scaffold00117 153188 1 A G - ReadM SNP 0030.scaffold00117 153208 1 T C - ReadM SNP 0030.scaffold00117 153241 1 G A - ReadM SNP 0030.scaffold00117 153280 1 T C - ReadM SNP 0030.scaffold00117 153283 1 A C - ReadM SNP 0030.scaffold00117 153412 1 C G - ReadM SNP 0030.scaffold00117 153469 1 T G - ReadM SNP 0030.scaffold00117 153487 1 T C - ReadM SNP 0030.scaffold00117 153490 1 C T - ReadM SNP 0030.scaffold00117 153602 1 T G - ReadM SNP 0030.scaffold00117 153688 1 T A - ReadM SNP 0030.scaffold00117 153695 2 GT CC - ReadM INDEL 0030.scaffold00117 153721 1 A . - ReadM SNP 0030.scaffold00117 153751 1 T G - ReadM SNP 0030.scaffold00117 153927 1 T C - ReadM SNP 0030.scaffold00117 153974 1 T A - ScafM INDEL 0030.scaffold00117 154004 5 CGCCT ..... scaffold9623 ScafM INDEL 0030.scaffold00117 154010 1 C . scaffold9623 Both SNP 0030.scaffold00117 154092 1 C T scaffold9623 Both SNP 0030.scaffold00117 154211 1 G T scaffold9623 Both SNP 0030.scaffold00117 154229 1 C A scaffold9623 ReadM SNP 0030.scaffold00117 154272 1 A T - ReadM INDEL 0030.scaffold00117 154368 1 . T - ReadM SNP 0030.scaffold00117 154376 1 T C - ReadM SNP 0030.scaffold00117 154470 1 G T - ReadM SNP 0030.scaffold00117 154493 1 T G - ReadM SNP 0030.scaffold00117 154525 1 T C - ReadM SNP 0030.scaffold00117 154767 1 T C - ReadM SNP 0030.scaffold00117 154795 1 C T - ReadM SNP 0030.scaffold00117 154967 1 G A - ReadM SNP 0030.scaffold00117 155043 1 A G - ReadM SNP 0030.scaffold00117 155108 1 T C - ReadM SNP 0030.scaffold00117 155112 1 C T - ReadM SNP 0030.scaffold00117 155202 1 A C - ReadM SNP 0030.scaffold00117 155222 1 A C - ReadM SNP 0030.scaffold00117 155249 1 A G - ReadM SNP 0030.scaffold00117 155287 1 A C - ReadM SNP 0030.scaffold00117 155384 1 A C - ReadM SNP 0030.scaffold00117 155421 1 T G - ReadM SNP 0030.scaffold00117 155424 1 T C - ReadM SNP 0030.scaffold00117 155577 1 A G - ReadM SNP 0030.scaffold00117 155597 1 A C - ReadM SNP 0030.scaffold00117 155626 1 T C - ReadM SNP 0030.scaffold00117 155684 1 T A - ReadM SNP 0030.scaffold00117 155774 1 G A - ReadM SNP 0030.scaffold00117 155776 1 G A - ReadM SNP 0030.scaffold00117 155811 1 A G - ReadM SNP 0030.scaffold00117 155909 1 G A - ReadM SNP 0030.scaffold00117 155991 1 A G - ReadM SNP 0030.scaffold00117 156050 1 T C - ReadM SNP 0030.scaffold00117 156055 1 G A - ReadM SNP 0030.scaffold00117 156156 1 C G - ReadM SNP 0030.scaffold00117 156213 1 A C - ReadM SNP 0030.scaffold00117 156258 1 T C - ReadM SNP 0030.scaffold00117 156328 1 T A - ReadM SNP 0030.scaffold00117 156505 1 A G - ReadM SNP 0030.scaffold00117 156522 1 C A - ReadM SNP 0030.scaffold00117 156718 1 A C - ReadM SNP 0030.scaffold00117 165938 1 G A - ReadM SNP 0030.scaffold00117 165944 1 A G - ReadM SNP 0030.scaffold00117 166173 1 G C - ReadM SNP 0030.scaffold00117 170666 1 C T - ReadM SNP 0030.scaffold00117 170726 1 C T - ReadM SNP 0030.scaffold00117 170741 1 C T - ReadM SNP 0030.scaffold00117 170772 1 C T - ReadM SNP 0030.scaffold00117 170782 1 C G - ReadM SNP 0030.scaffold00117 170832 1 T C - ReadM SNP 0030.scaffold00117 170867 1 G A - ReadM SNP 0030.scaffold00117 170886 1 C T - ReadM SNP 0030.scaffold00117 171066 1 A G - ReadM SNP 0030.scaffold00117 171094 1 G A - ReadM SNP 0030.scaffold00117 171198 1 C A - ReadM SNP 0030.scaffold00117 171214 1 A G - ReadM SNP 0030.scaffold00117 171315 1 C T - ReadM SNP 0030.scaffold00117 171318 1 G A - ReadM SNP 0030.scaffold00117 171368 1 C T - ReadM SNP 0030.scaffold00117 171375 1 C T - ReadM SNP 0030.scaffold00117 171486 1 T G - ReadM SNP 0030.scaffold00117 171759 1 C T - ReadM SNP 0030.scaffold00117 171767 2 CC TA - ReadM SNP 0030.scaffold00117 171848 1 T A - ReadM SNP 0030.scaffold00117 171890 1 T G - ReadM SNP 0030.scaffold00117 171914 1 C T - ReadM SNP 0030.scaffold00117 172167 1 T C - ReadM SNP 0030.scaffold00117 172217 1 A C - ReadM SNP 0030.scaffold00117 172301 1 A C - ReadM SNP 0030.scaffold00117 172335 1 G A - ReadM SNP 0030.scaffold00117 172449 2 TT CC - ReadM SNP 0030.scaffold00117 172507 1 C T - ReadM INDEL 0030.scaffold00117 172546 1 . T - ReadM SNP 0030.scaffold00117 172564 1 G A - ReadM SNP 0030.scaffold00117 172650 1 G T - ReadM SNP 0030.scaffold00117 172892 1 C A - ReadM SNP 0030.scaffold00117 172900 1 A G - ReadM SNP 0030.scaffold00117 172920 1 A G - ReadM SNP 0030.scaffold00117 172986 1 A G - ReadM SNP 0030.scaffold00117 173034 1 A G - ReadM SNP 0030.scaffold00117 173047 1 T G - ReadM SNP 0030.scaffold00117 173143 1 A G - ReadM SNP 0030.scaffold00117 173152 1 T A - ReadM SNP 0030.scaffold00117 173224 1 A G - ReadM SNP 0030.scaffold00117 173369 1 A C - ReadM SNP 0030.scaffold00117 173375 1 G A - ReadM SNP 0030.scaffold00117 173536 1 T C - ReadM SNP 0030.scaffold00117 173610 1 T G - ReadM SNP 0030.scaffold00117 173627 1 C T - ReadM SNP 0030.scaffold00117 173850 1 G T - ReadM SNP 0030.scaffold00117 173952 1 A G - ReadM SNP 0030.scaffold00117 174029 1 T G - ReadM SNP 0030.scaffold00117 174213 1 G C - ScafM SNP 0030.scaffold00117 175212 1 T C scaffold411 ReadM SNP 0030.scaffold00117 175395 1 A G - ReadM SNP 0030.scaffold00117 175449 1 C T - ReadM SNP 0030.scaffold00117 175472 1 A C - Both SNP 0030.scaffold00117 175492 1 C A scaffold411 Both SNP 0030.scaffold00117 175578 1 G A scaffold411 Both SNP 0030.scaffold00117 175596 1 A T scaffold411 Both SNP 0030.scaffold00117 175642 1 A G scaffold411 Both SNP 0030.scaffold00117 175687 1 G A scaffold411 Both SNP 0030.scaffold00117 175694 1 G A scaffold411 Both SNP 0030.scaffold00117 175708 1 A G scaffold411 Both INDEL 0030.scaffold00117 175812 1 T . scaffold411 ScafM INDEL 0030.scaffold00117 175849 1 G . scaffold411 ScafM INDEL 0030.scaffold00117 175860 5 TGTTT ..... scaffold411 ScafM SNP 0030.scaffold00117 175892 1 G T scaffold411 ScafM INDEL 0030.scaffold00117 175900 1 T . scaffold411 Both SNP 0030.scaffold00117 175922 1 A T scaffold411 Both SNP 0030.scaffold00117 175929 1 G A scaffold411 Both SNP 0030.scaffold00117 175943 1 T C scaffold411 Both SNP 0030.scaffold00117 176065 1 G A scaffold411 ReadM SNP 0030.scaffold00117 176121 1 C T - ReadM SNP 0030.scaffold00117 176197 1 A C - ReadM SNP 0030.scaffold00117 176221 1 T C - ReadM SNP 0030.scaffold00117 176257 1 A G - Both SNP 0030.scaffold00117 176286 1 A T scaffold411 ScafM SNP 0030.scaffold00117 176299 1 T A scaffold411 ScafM INDEL 0030.scaffold00117 176339 4 .... TTAA scaffold411 Both SNP 0030.scaffold00117 176401 1 C G scaffold411 Both SNP 0030.scaffold00117 176472 1 T C scaffold411 Both SNP 0030.scaffold00117 176531 1 G C scaffold411 ScafM SNP 0030.scaffold00117 176607 1 T A scaffold411 ScafM SNP 0030.scaffold00117 176609 1 G A scaffold411 ScafM SNP 0030.scaffold00117 176633 1 T A scaffold411 ScafM SNP 0030.scaffold00117 176655 1 G T scaffold411 ScafM SNP 0030.scaffold00117 176715 1 A G scaffold411 ScafM SNP 0030.scaffold00117 176739 1 T A scaffold411 ScafM INDEL 0030.scaffold00117 176753 1 A . scaffold411 ScafM SNP 0030.scaffold00117 176810 1 T G scaffold411 ScafM SNP 0030.scaffold00117 176826 1 G A scaffold411 ScafM SNP 0030.scaffold00117 176858 1 T C scaffold411 ScafM INDEL 0030.scaffold00117 176927 2 .. AT scaffold411 ScafM SNP 0030.scaffold00117 176953 1 G A scaffold411 ScafM SNP 0030.scaffold00117 177026 1 C T scaffold411 ScafM SNP 0030.scaffold00117 177142 1 A G scaffold411 ScafM SNP 0030.scaffold00117 177187 1 G A scaffold411 ScafM SNP 0030.scaffold00117 177274 1 C G scaffold411 ScafM INDEL 0030.scaffold00117 177290 1 G . scaffold411 ScafM INDEL 0030.scaffold00117 177350 1 C . scaffold411 ScafM SNP 0030.scaffold00117 177423 1 G A scaffold411 ScafM SNP 0030.scaffold00117 177442 2 CT AA scaffold411 ScafM INDEL 0030.scaffold00117 177515 1 T . scaffold411 ScafM INDEL 0030.scaffold00117 177524 1 A . scaffold411 Both SNP 0030.scaffold00117 177571 1 C T scaffold411 Both SNP 0030.scaffold00117 177808 1 G A scaffold411 Both SNP 0030.scaffold00117 177869 1 T C scaffold411 Both SNP 0030.scaffold00117 177886 1 T G scaffold411 Both SNP 0030.scaffold00117 177888 1 C A scaffold411 Both INDEL 0030.scaffold00117 177955 1 . T scaffold411 ScafM INDEL 0030.scaffold00117 178024 3 ... TGA scaffold411 ScafM INDEL 0030.scaffold00117 178026 1 . T scaffold411 ScafM SNP 0030.scaffold00117 178055 1 A G scaffold411 ScafM INDEL 0030.scaffold00117 178089 1 . A scaffold411 ReadM INDEL 0030.scaffold00117 178131 1 A . - ScafM INDEL 0030.scaffold00117 178131 2 AA .T scaffold411 Both SNP 0030.scaffold00117 178142 1 A G scaffold411 ScafM SNP 0030.scaffold00117 178204 1 C T scaffold411 ScafM SNP 0030.scaffold00117 178208 1 A G scaffold411 ScafM SNP 0030.scaffold00117 178226 1 C A scaffold411 ScafM SNP 0030.scaffold00117 178243 1 G A scaffold411 ScafM INDEL 0030.scaffold00117 178245 2 .. TA scaffold411 Both SNP 0030.scaffold00117 178410 1 A C scaffold411 Both SNP 0030.scaffold00117 178515 1 A T scaffold411 Both INDEL 0030.scaffold00117 178533 1 . T scaffold411 ReadM SNP 0030.scaffold00117 178591 1 C T - ReadM SNP 0030.scaffold00117 178644 1 T G - ReadM INDEL 0030.scaffold00117 178805 2 TA .. - ReadM SNP 0030.scaffold00117 178841 1 T A - ScafM INDEL 0030.scaffold00117 179339 1 T . scaffold411 ScafM INDEL 0030.scaffold00117 179371 2 TT .. scaffold411 ScafM SNP 0030.scaffold00117 179395 1 A G scaffold411 ReadM SNP 0030.scaffold00117 179735 1 A T - ReadM SNP 0030.scaffold00117 179738 1 T C - ReadM SNP 0030.scaffold00117 179902 1 G A - ReadM SNP 0030.scaffold00117 180431 1 G A - ReadM SNP 0030.scaffold00117 180573 1 G A - ReadM SNP 0030.scaffold00117 180599 1 T A - ReadM SNP 0030.scaffold00117 181763 1 A G - ReadM SNP 0030.scaffold00117 181780 1 G A - ReadM SNP 0030.scaffold00117 181827 1 G A - ReadM SNP 0030.scaffold00117 182284 1 A T - ReadM SNP 0030.scaffold00117 182318 1 A G - ScafM SNP 0030.scaffold00117 182340 1 G A scaffold29762 ScafM SNP 0030.scaffold00117 182348 1 C G scaffold29762 Both SNP 0030.scaffold00117 182405 1 G T scaffold29762 ScafM SNP 0030.scaffold00117 182437 1 T A scaffold29762 ReadM SNP 0030.scaffold00117 182756 1 T G - ReadM SNP 0030.scaffold00117 182974 1 T C - ReadM SNP 0030.scaffold00117 183257 1 G T - ReadM SNP 0030.scaffold00117 183289 1 C A - ReadM SNP 0030.scaffold00117 183747 1 G A - ScafM SNP 0030.scaffold00117 185304 1 G A scaffold30008 ScafM SNP 0030.scaffold00117 185343 1 G A scaffold30008 ScafM INDEL 0030.scaffold00117 185369 1 C . scaffold7884 ScafM SNP 0030.scaffold00117 185375 1 C T scaffold7884 ScafM SNP 0030.scaffold00117 185435 1 G A scaffold7884 ScafM INDEL 0030.scaffold00117 185444 2 .. AT scaffold7884 ScafM SNP 0030.scaffold00117 185447 1 G A scaffold7884 ScafM SNP 0030.scaffold00117 185450 2 CT AC scaffold7884 ScafM SNP 0030.scaffold00117 185472 1 C G scaffold7884 ScafM SNP 0030.scaffold00117 185475 1 T A scaffold7884 ReadM SNP 0030.scaffold00117 191456 1 A G - ReadM SNP 0030.scaffold00117 191473 1 G A - ScafM SNP 0030.scaffold00117 191933 1 T G scaffold15694 ScafM SNP 0030.scaffold00117 191973 1 A C scaffold15694 ScafM SNP 0030.scaffold00117 191982 1 G T scaffold15694 ScafM SNP 0030.scaffold00117 192010 1 T A scaffold15694 ScafM SNP 0030.scaffold00117 192014 1 C T scaffold15694 ScafM SNP 0030.scaffold00117 192025 1 G A scaffold15694 ScafM SNP 0030.scaffold00117 192057 1 A G scaffold15694 ScafM SNP 0030.scaffold00117 192067 2 GT AC scaffold15694 ScafM SNP 0030.scaffold00117 192073 1 G A scaffold15694 ScafM SNP 0030.scaffold00117 192076 1 T C scaffold15694 ScafM SNP 0030.scaffold00117 192085 1 A G scaffold15694 ScafM SNP 0030.scaffold00117 192099 1 T C scaffold15694 ScafM INDEL 0030.scaffold00117 192121 1 . G scaffold15694 ScafM SNP 0030.scaffold00117 192123 1 T A scaffold15694 ScafM SNP 0030.scaffold00117 192151 1 A G scaffold15694 ScafM INDEL 0030.scaffold00117 192166 1 . A scaffold15694 ScafM SNP 0030.scaffold00117 192172 1 T C scaffold15694 ScafM SNP 0030.scaffold00117 192179 1 T A scaffold15694 ScafM SNP 0030.scaffold00117 192211 1 G A scaffold15694 ScafM SNP 0030.scaffold00117 192262 1 A G scaffold15694 ScafM SNP 0030.scaffold00117 192272 1 G A scaffold15694 ScafM SNP 0030.scaffold00117 192289 1 A T scaffold15694 ScafM SNP 0030.scaffold00117 192308 1 C T scaffold15694 ScafM SNP 0030.scaffold00117 192345 1 A G scaffold15694 ScafM SNP 0030.scaffold00117 192504 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 192512 1 C A scaffold12516 ScafM SNP 0030.scaffold00117 192536 1 C T scaffold12516 ScafM INDEL 0030.scaffold00117 192548 3 TTA ... scaffold12516 ScafM SNP 0030.scaffold00117 192568 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 192572 1 A G scaffold12516 ScafM SNP 0030.scaffold00117 193126 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 193146 1 T C scaffold12516 ScafM INDEL 0030.scaffold00117 193183 4 .... GATC scaffold12516 ScafM SNP 0030.scaffold00117 193302 1 A G scaffold12516 ScafM SNP 0030.scaffold00117 193332 1 T C scaffold12516 ScafM SNP 0030.scaffold00117 193336 1 T C scaffold12516 Both SNP 0030.scaffold00117 193459 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 193558 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 193616 1 C A scaffold12516 Both SNP 0030.scaffold00117 193666 1 G C scaffold12516 Both SNP 0030.scaffold00117 193668 1 G T scaffold12516 ScafM SNP 0030.scaffold00117 193692 1 T G scaffold12516 ScafM SNP 0030.scaffold00117 193740 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 193750 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 193754 1 A T scaffold12516 Both INDEL 0030.scaffold00117 193777 1 . A scaffold12516 Both SNP 0030.scaffold00117 193846 1 C T scaffold12516 ScafM INDEL 0030.scaffold00117 193933 4 .... TCGA scaffold12516 ScafM SNP 0030.scaffold00117 193945 1 T A scaffold12516 ScafM SNP 0030.scaffold00117 193952 1 A C scaffold12516 ScafM SNP 0030.scaffold00117 193979 1 T C scaffold12516 ScafM SNP 0030.scaffold00117 194018 1 A C scaffold12516 ScafM INDEL 0030.scaffold00117 194040 1 . A scaffold12516 Both SNP 0030.scaffold00117 194126 1 A C scaffold12516 Both SNP 0030.scaffold00117 194255 1 A T scaffold12516 Both SNP 0030.scaffold00117 194359 1 C T scaffold12516 Both SNP 0030.scaffold00117 194446 1 T G scaffold12516 Both SNP 0030.scaffold00117 194450 1 T C scaffold12516 Both SNP 0030.scaffold00117 194566 1 A C scaffold12516 Both INDEL 0030.scaffold00117 194651 1 . A scaffold12516 Both SNP 0030.scaffold00117 194675 1 A C scaffold12516 ScafM INDEL 0030.scaffold00117 194704 3 AAA ... scaffold12516 Both SNP 0030.scaffold00117 194777 1 C T scaffold12516 Both SNP 0030.scaffold00117 194910 1 A T scaffold12516 Both SNP 0030.scaffold00117 195063 1 G C scaffold12516 Both SNP 0030.scaffold00117 195073 1 C A scaffold12516 Both SNP 0030.scaffold00117 195197 1 A G scaffold12516 ReadM SNP 0030.scaffold00117 195209 1 A G - ScafM SNP 0030.scaffold00117 216972 1 G A scaffold55496 ScafM SNP 0030.scaffold00117 216980 1 A T scaffold55496 ScafM SNP 0030.scaffold00117 217013 1 G C scaffold55496 ScafM SNP 0030.scaffold00117 217015 1 A T scaffold55496 ScafM INDEL 0030.scaffold00117 217020 2 .G AC scaffold55496 ScafM SNP 0030.scaffold00117 217048 1 T C scaffold55496 ScafM SNP 0030.scaffold00117 217079 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217097 1 C T scaffold55496 ScafM SNP 0030.scaffold00117 217103 1 A C scaffold55496 ScafM SNP 0030.scaffold00117 217125 1 C T scaffold55496 ScafM SNP 0030.scaffold00117 217131 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217271 1 C A scaffold55496 ScafM SNP 0030.scaffold00117 217291 1 T C scaffold55496 ScafM SNP 0030.scaffold00117 217326 1 T C scaffold55496 ScafM SNP 0030.scaffold00117 217348 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217354 1 A C scaffold55496 ScafM SNP 0030.scaffold00117 217358 2 CA TG scaffold55496 ScafM SNP 0030.scaffold00117 217362 1 C G scaffold55496 ScafM SNP 0030.scaffold00117 217382 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217399 1 A C scaffold55496 ScafM SNP 0030.scaffold00117 217407 2 CC TT scaffold55496 ScafM SNP 0030.scaffold00117 217411 2 CA AC scaffold55496 ScafM SNP 0030.scaffold00117 217424 1 T A scaffold55496 ScafM SNP 0030.scaffold00117 217453 1 A T scaffold55496 ScafM SNP 0030.scaffold00117 217503 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217520 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217525 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217527 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217529 1 G A scaffold55496 ScafM SNP 0030.scaffold00117 217545 1 A T scaffold55496 ScafM SNP 0030.scaffold00117 217557 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217567 1 T A scaffold55496 ScafM SNP 0030.scaffold00117 217589 1 A G scaffold55496 ScafM SNP 0030.scaffold00117 217595 1 A T scaffold55496 ScafM SNP 0030.scaffold00117 217676 1 G A scaffold55496 ScafM SNP 0030.scaffold00117 217690 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217703 1 T A scaffold55496 ScafM SNP 0030.scaffold00117 217708 1 T G scaffold55496 ScafM SNP 0030.scaffold00117 217741 1 T A scaffold55496 ScafM SNP 0030.scaffold00117 218126 1 A G scaffold5492 ScafM SNP 0030.scaffold00117 218132 2 TG CC scaffold5492 ScafM SNP 0030.scaffold00117 218144 1 G T scaffold5492 ScafM SNP 0030.scaffold00117 218157 1 G A scaffold5492 ScafM SNP 0030.scaffold00117 218168 1 G A scaffold5492 ScafM SNP 0030.scaffold00117 218174 1 G A scaffold5492 ScafM SNP 0030.scaffold00117 218199 1 A G scaffold5492 ScafM SNP 0030.scaffold00117 218205 1 T A scaffold5492 ScafM SNP 0030.scaffold00117 218289 1 A T scaffold5492 ScafM SNP 0030.scaffold00117 218293 1 A G scaffold5492 ScafM SNP 0030.scaffold00117 218296 1 G A scaffold5492 ScafM SNP 0030.scaffold00117 218303 1 G A scaffold5492 ScafM SNP 0030.scaffold00117 218316 1 T C scaffold5492 ScafM SNP 0030.scaffold00117 218319 1 T C scaffold5492 ScafM SNP 0030.scaffold00117 219194 1 A G scaffold5492 ScafM INDEL 0030.scaffold00117 219204 3 AAT ... scaffold5492 ScafM SNP 0030.scaffold00117 219263 1 C T scaffold5492 ScafM SNP 0030.scaffold00117 247308 1 C A scaffold10145 ScafM SNP 0030.scaffold00117 247323 1 T C scaffold10145 ScafM SNP 0030.scaffold00117 247327 1 A G scaffold10145 ScafM SNP 0030.scaffold00117 247331 1 C A scaffold10145 ScafM SNP 0030.scaffold00117 247333 1 A C scaffold10145 ScafM SNP 0030.scaffold00117 247337 1 T A scaffold10145 ScafM SNP 0030.scaffold00117 247363 1 A T scaffold10145 ScafM SNP 0030.scaffold00117 247381 2 TG CA scaffold10145 ScafM SNP 0030.scaffold00117 247392 1 G A scaffold10145 ScafM SNP 0030.scaffold00117 247414 1 G C scaffold10145 ScafM SNP 0030.scaffold00117 247418 1 A C scaffold10145 ScafM SNP 0030.scaffold00117 247424 1 T A scaffold10145 ScafM SNP 0030.scaffold00117 247446 1 T G scaffold10145 ScafM SNP 0030.scaffold00117 247448 1 C T scaffold10145 ScafM SNP 0030.scaffold00117 248071 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248081 1 C T scaffold28689 ScafM SNP 0030.scaffold00117 248091 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248093 1 A C scaffold28689 ScafM SNP 0030.scaffold00117 248100 1 G A scaffold28689 ScafM SNP 0030.scaffold00117 248104 1 C A scaffold28689 ScafM SNP 0030.scaffold00117 248126 1 T G scaffold28689 ScafM SNP 0030.scaffold00117 248138 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248150 1 C T scaffold28689 ScafM SNP 0030.scaffold00117 248154 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248175 1 A G scaffold28689 ScafM SNP 0030.scaffold00117 248184 1 A G scaffold28689 ScafM SNP 0030.scaffold00117 248196 1 G A scaffold28689 ScafM SNP 0030.scaffold00117 248203 1 G A scaffold28689 ScafM SNP 0030.scaffold00117 248214 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248229 1 C T scaffold28689 ScafM SNP 0030.scaffold00117 248234 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248240 1 C G scaffold28689 ScafM SNP 0030.scaffold00117 248243 1 A G scaffold28689 ScafM SNP 0030.scaffold00117 248256 1 T C scaffold28689 ScafM INDEL 0030.scaffold00117 248275 1 T . scaffold28689 ScafM SNP 0030.scaffold00117 248279 1 A C scaffold28689 ScafM SNP 0030.scaffold00117 248308 1 C A scaffold28689 ScafM SNP 0030.scaffold00117 248328 1 G A scaffold28689 ScafM SNP 0030.scaffold00117 248387 1 G A scaffold28689 ScafM SNP 0030.scaffold00117 248402 1 A C scaffold28689 ScafM SNP 0030.scaffold00117 248404 1 T C scaffold28689 ScafM SNP 0030.scaffold00117 248414 1 C T scaffold28689 ScafM SNP 0030.scaffold00117 254371 1 T A scaffold12516 ScafM SNP 0030.scaffold00117 254386 1 T C scaffold12516 ScafM INDEL 0030.scaffold00117 254420 1 T . scaffold12516 ScafM SNP 0030.scaffold00117 254440 1 G T scaffold12516 ScafM SNP 0030.scaffold00117 255025 1 A G scaffold12516 ScafM SNP 0030.scaffold00117 255041 1 A C scaffold12516 ScafM INDEL 0030.scaffold00117 255198 1 . T scaffold12516 ScafM SNP 0030.scaffold00117 255217 1 T A scaffold12516 ScafM INDEL 0030.scaffold00117 255228 2 .G AA scaffold12516 ScafM SNP 0030.scaffold00117 255233 1 A T scaffold12516 ScafM SNP 0030.scaffold00117 255235 1 C T scaffold12516 ScafM INDEL 0030.scaffold00117 255269 7 AATTGGT ....... scaffold12516 ScafM INDEL 0030.scaffold00117 255296 1 T . scaffold12516 Both SNP 0030.scaffold00117 255409 1 T A scaffold12516 Both SNP 0030.scaffold00117 255426 1 T C scaffold12516 Both SNP 0030.scaffold00117 255482 1 A T scaffold12516 Both SNP 0030.scaffold00117 255532 1 G A scaffold12516 Both SNP 0030.scaffold00117 255750 1 G A scaffold12516 Both SNP 0030.scaffold00117 255763 1 T G scaffold12516 Both SNP 0030.scaffold00117 255977 1 G A scaffold12516 Both SNP 0030.scaffold00117 256216 1 A G scaffold12516 Both INDEL 0030.scaffold00117 256323 1 . T scaffold12516 Both SNP 0030.scaffold00117 256488 1 T G scaffold12516 Both SNP 0030.scaffold00117 256523 1 C T scaffold12516 Both SNP 0030.scaffold00117 256533 1 C T scaffold12516 Both INDEL 0030.scaffold00117 256559 1 A . scaffold12516 Both SNP 0030.scaffold00117 256770 1 A G scaffold12516 Both SNP 0030.scaffold00117 256819 1 T A scaffold12516 ScafM SNP 0030.scaffold00117 256893 1 A G scaffold12516 Both SNP 0030.scaffold00117 257152 1 T C scaffold12516 Both SNP 0030.scaffold00117 257175 1 G T scaffold12516 ReadM SNP 0030.scaffold00117 257219 1 C T - ReadM SNP 0030.scaffold00117 257257 1 C T - ReadM SNP 0030.scaffold00117 257298 1 C A - ReadM SNP 0030.scaffold00117 257375 1 T G - Both SNP 0030.scaffold00117 257464 1 C T scaffold12516 Both SNP 0030.scaffold00117 257473 1 C T scaffold12516 Both SNP 0030.scaffold00117 257504 1 T G scaffold12516 ReadM SNP 0030.scaffold00117 257555 1 T C - ReadM SNP 0030.scaffold00117 257601 1 T C - Both SNP 0030.scaffold00117 257709 1 A C scaffold12516 Both SNP 0030.scaffold00117 257813 1 T A scaffold12516 Both SNP 0030.scaffold00117 257820 1 T C scaffold12516 Both SNP 0030.scaffold00117 257866 1 C T scaffold12516 Both SNP 0030.scaffold00117 257967 1 T A scaffold12516 Both SNP 0030.scaffold00117 258041 1 C T scaffold12516 Both SNP 0030.scaffold00117 258094 1 A C scaffold12516 ScafM SNP 0030.scaffold00117 258108 1 C T scaffold12516 ReadM SNP 0030.scaffold00117 258256 1 T G - ReadM INDEL 0030.scaffold00117 258293 2 .. TT - ReadM SNP 0030.scaffold00117 258323 1 A G - ScafM SNP 0030.scaffold00117 258421 1 T A scaffold12516 ScafM SNP 0030.scaffold00117 258423 1 T A scaffold12516 ScafM SNP 0030.scaffold00117 258433 1 A T scaffold12516 ScafM INDEL 0030.scaffold00117 258443 4 .... GTAA scaffold12516 ScafM SNP 0030.scaffold00117 258445 1 T C scaffold12516 ScafM INDEL 0030.scaffold00117 258487 3 ... ATA scaffold12516 ScafM INDEL 0030.scaffold00117 258505 15 ............... TGTTAACGTTTTGAT scaffold12516 Both INDEL 0030.scaffold00117 258703 1 T . scaffold12516 Both SNP 0030.scaffold00117 258717 1 A T scaffold12516 Both SNP 0030.scaffold00117 258777 1 T C scaffold12516 Both SNP 0030.scaffold00117 259421 1 T C scaffold12516 Both SNP 0030.scaffold00117 259885 1 G A scaffold12516 ScafM INDEL 0030.scaffold00117 259998 8 ........ GTGTCTAC scaffold12516 ScafM SNP 0030.scaffold00117 260009 1 A T scaffold12516 ScafM SNP 0030.scaffold00117 260171 1 A G scaffold12516 ScafM INDEL 0030.scaffold00117 260184 9 AATATAGAT ......... scaffold12516 ScafM INDEL 0030.scaffold00117 260195 5 AAAAC ..... scaffold12516 ScafM SNP 0030.scaffold00117 260265 1 A T scaffold12516 ScafM SNP 0030.scaffold00117 260273 1 C G scaffold12516 ScafM SNP 0030.scaffold00117 260372 1 C A scaffold12516 ScafM INDEL 0030.scaffold00117 260383 2 TT .. scaffold12516 ScafM SNP 0030.scaffold00117 260391 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 260946 1 A C scaffold12516 ScafM INDEL 0030.scaffold00117 261126 1 . A scaffold12516 Both SNP 0030.scaffold00117 261175 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 261377 1 T A scaffold12516 ScafM INDEL 0030.scaffold00117 261422 4 CTAA .... scaffold12516 ScafM INDEL 0030.scaffold00117 261481 4 .... TTTT scaffold12516 ScafM SNP 0030.scaffold00117 261482 1 A T scaffold12516 Both INDEL 0030.scaffold00117 261532 1 A . scaffold12516 Both SNP 0030.scaffold00117 261651 1 T C scaffold12516 Both INDEL 0030.scaffold00117 261938 3 ... TTT scaffold12516 ScafM SNP 0030.scaffold00117 262731 1 T C scaffold12516 ScafM SNP 0030.scaffold00117 262994 1 A G scaffold12516 ScafM SNP 0030.scaffold00117 263123 1 A G scaffold12516 Both SNP 0030.scaffold00117 263486 1 A G scaffold12516 Both SNP 0030.scaffold00117 263495 1 G A scaffold12516 ScafM INDEL 0030.scaffold00117 263549 5 AAAAA ..... scaffold12516 ScafM SNP 0030.scaffold00117 263555 2 AA CT scaffold12516 Both SNP 0030.scaffold00117 263875 1 G A scaffold12516 ScafM SNP 0030.scaffold00117 263962 1 G T scaffold12516 Both SNP 0030.scaffold00117 264159 1 A G scaffold12516 Both SNP 0030.scaffold00117 264514 1 T C scaffold12516 Both SNP 0030.scaffold00117 264724 1 A G scaffold12516 Both SNP 0030.scaffold00117 264751 1 C A scaffold12516 Both SNP 0030.scaffold00117 264780 1 T G scaffold12516 Both SNP 0030.scaffold00117 264870 1 G T scaffold12516 Both SNP 0030.scaffold00117 264957 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 265063 1 T C scaffold12516 ScafM SNP 0030.scaffold00117 265294 1 G T scaffold12516 ScafM INDEL 0030.scaffold00117 265447 1 . C scaffold12516 ReadM SNP 0030.scaffold00117 273930 1 C A - ReadM SNP 0030.scaffold00117 274169 1 C T - ReadM SNP 0030.scaffold00117 274258 1 T C - ReadM SNP 0030.scaffold00117 274281 1 A G - ReadM SNP 0030.scaffold00117 274314 1 T C - ReadM SNP 0030.scaffold00117 274322 1 T C - ReadM SNP 0030.scaffold00117 274410 1 T C - ReadM SNP 0030.scaffold00117 274535 1 G A - ReadM SNP 0030.scaffold00117 275604 1 T C - Both SNP 0030.scaffold00117 275834 1 C T scaffold12516 Both SNP 0030.scaffold00117 276362 1 T C scaffold12516 Both SNP 0030.scaffold00117 276628 1 T C scaffold12516 Both SNP 0030.scaffold00117 276767 1 T C scaffold12516 Both SNP 0030.scaffold00117 277474 1 C A scaffold12516 Both INDEL 0030.scaffold00117 277734 2 TT .. scaffold12516 Both SNP 0030.scaffold00117 277774 1 C G scaffold12516 Both INDEL 0030.scaffold00117 277800 1 G . scaffold12516 Both SNP 0030.scaffold00117 277967 1 C T scaffold12516 Both SNP 0030.scaffold00117 278411 1 A G scaffold12516 Both SNP 0030.scaffold00117 278796 1 A T scaffold12516 ScafM INDEL 0030.scaffold00117 279026 11 GTATTTTTTCC ........... scaffold12516 Both SNP 0030.scaffold00117 279162 1 C T scaffold12516 ScafM INDEL 0030.scaffold00117 279545 23 ....................... AGAGGAATGAGTACTTACAGATC scaffold12516 ScafM INDEL 0030.scaffold00117 279595 2 CC .. scaffold12516 ScafM SNP 0030.scaffold00117 279998 1 C T scaffold12516 ScafM INDEL 0030.scaffold00117 280032 1 . T scaffold12516 ScafM INDEL 0030.scaffold00117 280039 2 .. TT scaffold12516 ScafM INDEL 0030.scaffold00117 280188 1 . A scaffold12516 ReadM SNP 0030.scaffold00117 280530 1 G A - ReadM SNP 0030.scaffold00117 280554 1 T C - ReadM SNP 0030.scaffold00117 280617 1 A G - Both SNP 0030.scaffold00117 281010 1 G A scaffold12516 Both SNP 0030.scaffold00117 282203 1 T A scaffold12516 Both INDEL 0030.scaffold00117 282329 1 A . scaffold12516 Both SNP 0030.scaffold00117 282423 1 A T scaffold12516 Both SNP 0030.scaffold00117 282486 1 T C scaffold12516 Both INDEL 0030.scaffold00117 283050 1 . A scaffold12516 Both SNP 0030.scaffold00117 283306 1 T C scaffold12516 Both SNP 0030.scaffold00117 283438 1 T C scaffold12516 Both SNP 0030.scaffold00117 283534 1 T G scaffold12516 Both SNP 0030.scaffold00117 283616 1 T C scaffold12516 Both SNP 0030.scaffold00117 283620 1 T C scaffold12516 Both SNP 0030.scaffold00117 283677 1 T C scaffold12516 Both SNP 0030.scaffold00117 284042 1 A C scaffold12516 ScafM INDEL 0030.scaffold00117 284354 9 AGACAAGGA ......... scaffold12516 ScafM INDEL 0030.scaffold00117 284632 3 ATA ... scaffold12516 Both SNP 0030.scaffold00117 284669 1 A T scaffold12516 Both SNP 0030.scaffold00117 284733 1 T C scaffold12516 Both SNP 0030.scaffold00117 284887 1 T A scaffold12516 Both SNP 0030.scaffold00117 285051 1 A G scaffold12516 Both SNP 0030.scaffold00117 285323 1 C T scaffold12516 Both SNP 0030.scaffold00117 286118 1 T A scaffold12516 Both SNP 0030.scaffold00117 286166 1 C T scaffold12516 Both SNP 0030.scaffold00117 286358 1 A T scaffold12516 Both SNP 0030.scaffold00117 286466 1 C A scaffold12516 Both SNP 0030.scaffold00117 286574 1 T C scaffold12516 Both SNP 0030.scaffold00117 286636 1 C T scaffold12516 Both SNP 0030.scaffold00117 286829 1 G A scaffold12516 Both SNP 0030.scaffold00117 287034 1 G T scaffold12516 Both SNP 0030.scaffold00117 287206 1 T A scaffold12516 Both SNP 0030.scaffold00117 287579 1 A G scaffold12516 Both SNP 0030.scaffold00117 288339 1 G A scaffold12516 Both SNP 0030.scaffold00117 288598 1 C T scaffold12516 Both SNP 0030.scaffold00117 289175 1 A T scaffold12516 Both SNP 0030.scaffold00117 289187 1 G A scaffold12516 Both SNP 0030.scaffold00117 289218 1 A T scaffold12516 Both SNP 0030.scaffold00117 289458 1 T G scaffold12516 Both SNP 0030.scaffold00117 289485 1 T A scaffold12516 Both SNP 0030.scaffold00117 289949 1 C A scaffold12516 Both SNP 0030.scaffold00117 290246 1 C G scaffold12516 ScafM INDEL 0030.scaffold00117 290339 6 ...... ATGTAA scaffold12516 ReadM SNP 0030.scaffold00117 290342 1 A G - Both SNP 0030.scaffold00117 290425 1 T G scaffold12516 Both INDEL 0030.scaffold00117 290583 1 C . scaffold12516 ReadM INDEL 0030.scaffold00117 290801 2 AT .. - ReadM SNP 0030.scaffold00117 291341 1 T C - ScafM INDEL 0030.scaffold00117 291432 28 ATCATTACAGGAGATACATAGCTTTCAA ............................ scaffold12516 ScafM INDEL 0030.scaffold00117 291495 1 . T scaffold12516 Both SNP 0030.scaffold00117 292052 1 T G scaffold12516 Both SNP 0030.scaffold00117 292057 1 G T scaffold12516 ScafM SNP 0030.scaffold00117 293118 1 G A scaffold12516 Both SNP 0030.scaffold00117 293299 1 C G scaffold12516 Both SNP 0030.scaffold00117 293390 1 G A scaffold12516 Both SNP 0030.scaffold00117 293529 1 G T scaffold12516 Both SNP 0030.scaffold00117 293532 1 C T scaffold12516 Both INDEL 0030.scaffold00117 293655 1 G . scaffold12516 ScafM SNP 0030.scaffold00117 293657 1 C A scaffold12516 Both SNP 0030.scaffold00117 293776 1 T C scaffold12516 Both SNP 0030.scaffold00117 293875 1 C T scaffold12516 ReadM SNP 0030.scaffold00117 294601 1 C G - ReadM SNP 0030.scaffold00117 294631 1 G A - ReadM SNP 0030.scaffold00117 294648 1 T C - Both INDEL 0030.scaffold00117 294989 1 A . scaffold12516 Both SNP 0030.scaffold00117 295439 1 T C scaffold12516 ScafM SNP 0030.scaffold00117 295536 6 TTGAAT CCCCCC scaffold12516 ScafM SNP 0030.scaffold00117 295543 2 TG CC scaffold12516 ScafM SNP 0030.scaffold00117 295546 2 AT CC scaffold12516 ScafM INDEL 0030.scaffold00117 295549 7 AGTGTTT ....... scaffold12516 ScafM INDEL 0030.scaffold00117 295557 2 AA .. scaffold12516 Both SNP 0030.scaffold00117 295611 1 T C scaffold12516 ReadM SNP 0030.scaffold00117 296429 1 A G - ReadM SNP 0030.scaffold00117 296719 1 T A - ReadM SNP 0030.scaffold00117 296870 1 C T - ReadM SNP 0030.scaffold00117 296965 1 T C - ReadM SNP 0030.scaffold00117 297130 1 C G - ReadM SNP 0030.scaffold00117 297533 1 A G - ReadM SNP 0030.scaffold00117 297672 1 T C - ReadM SNP 0030.scaffold00117 297766 1 C A - ReadM INDEL 0030.scaffold00117 297859 3 CTT ... - Both SNP 0030.scaffold00117 298172 1 T A scaffold12516 Both SNP 0030.scaffold00117 298248 1 A C scaffold12516 ReadM SNP 0030.scaffold00117 298767 1 A C - Both SNP 0030.scaffold00117 298874 1 T A scaffold12516 Both SNP 0030.scaffold00117 298931 1 A T scaffold12516 Both SNP 0030.scaffold00117 299238 1 A C scaffold12516 Both SNP 0030.scaffold00117 299320 1 C A scaffold12516 Both SNP 0030.scaffold00117 299582 1 T A scaffold12516 ReadM INDEL 0030.scaffold00117 299609 1 . A - Both SNP 0030.scaffold00117 299985 1 G C scaffold12516 Both SNP 0030.scaffold00117 300072 1 A T scaffold12516 Both SNP 0030.scaffold00117 300083 1 T C scaffold12516 Both SNP 0030.scaffold00117 300238 1 C G scaffold12516 Both SNP 0030.scaffold00117 300242 1 C T scaffold12516 Both SNP 0030.scaffold00117 300272 1 T C scaffold12516 Both INDEL 0030.scaffold00117 300408 3 ... CAA scaffold12516 Both SNP 0030.scaffold00117 300496 1 C T scaffold12516 ScafM SNP 0030.scaffold00117 301116 2 AG GA scaffold12516 Both SNP 0030.scaffold00117 301147 1 A C scaffold12516 Both SNP 0030.scaffold00117 301194 1 C G scaffold12516 Both SNP 0030.scaffold00117 301348 1 A T scaffold12516 Both SNP 0030.scaffold00117 301798 1 T A scaffold12516 ScafM INDEL 0030.scaffold00117 301850 7 TCAAGCA ....... scaffold12516 Both SNP 0030.scaffold00117 301875 1 A T scaffold12516 Both SNP 0030.scaffold00117 301979 1 G C scaffold12516 Both SNP 0030.scaffold00117 302316 1 G A scaffold12516 Both INDEL 0030.scaffold00117 302980 1 . A scaffold12516 Both SNP 0030.scaffold00117 303241 1 A T scaffold12516 Both SNP 0030.scaffold00117 303467 1 T A scaffold12516 ScafM INDEL 0030.scaffold00117 303699 1 . A scaffold12516 ScafM SNP 0030.scaffold00117 303860 2 AT GA scaffold12516 ScafM SNP 0030.scaffold00117 304898 1 A C scaffold12516 ScafM SNP 0030.scaffold00117 304901 1 C T scaffold12516 Both SNP 0030.scaffold00117 304972 1 T A scaffold12516 Both SNP 0030.scaffold00117 305374 1 A C scaffold12516 Both SNP 0030.scaffold00117 305497 1 T G scaffold12516 Both SNP 0030.scaffold00117 305648 1 T G scaffold12516 Both SNP 0030.scaffold00117 306305 1 G T scaffold12516 Both SNP 0030.scaffold00117 306840 1 T C scaffold12516 ScafM INDEL 0030.scaffold00117 307143 7 CGTCAGC ....... scaffold12516 Both INDEL 0030.scaffold00117 307324 1 G . scaffold12516 Both SNP 0030.scaffold00117 307698 1 T C scaffold12516 Both SNP 0030.scaffold00117 307708 1 G T scaffold12516 Both SNP 0030.scaffold00117 307945 1 G A scaffold12516 Both SNP 0030.scaffold00117 307993 1 G T scaffold12516 Both SNP 0030.scaffold00117 308309 1 G T scaffold12516 Both SNP 0030.scaffold00117 308334 1 T A scaffold12516 Both SNP 0030.scaffold00117 308713 1 C T scaffold12516 Both SNP 0030.scaffold00117 308835 1 T C scaffold12516 Both SNP 0030.scaffold00117 309049 1 C T scaffold12516 Both SNP 0030.scaffold00117 309333 1 A G scaffold12516 Both SNP 0030.scaffold00117 309402 1 T A scaffold12516 ReadM SNP 0030.scaffold00117 309731 1 A G - ReadM SNP 0030.scaffold00117 309740 1 A G - Both SNP 0030.scaffold00117 310163 1 G C scaffold12516 ScafM INDEL 0030.scaffold00117 310256 2 .. TT scaffold12516 ScafM INDEL 0030.scaffold00117 310509 1 T . scaffold12516 ReadM SNP 0030.scaffold00117 312040 1 C T - ReadM SNP 0030.scaffold00117 312118 1 T C - Both SNP 0030.scaffold00117 312253 1 A G scaffold5675 Both SNP 0030.scaffold00117 312317 1 T C scaffold5675 Both SNP 0030.scaffold00117 312425 1 A C scaffold5675 Both SNP 0030.scaffold00117 312489 1 T A scaffold5675 Both INDEL 0030.scaffold00117 312556 1 . A scaffold5675 Both INDEL 0030.scaffold00117 312596 1 T . scaffold5675 Both INDEL 0030.scaffold00117 312763 1 . A scaffold5675 Both SNP 0030.scaffold00117 313041 1 A G scaffold5675 Both SNP 0030.scaffold00117 313225 1 A G scaffold5675 Both SNP 0030.scaffold00117 313417 1 C T scaffold5675 ScafM INDEL 0030.scaffold00117 313672 3 ... GCT scaffold5675 Both INDEL 0030.scaffold00117 314038 1 . A scaffold5675 ScafM SNP 0030.scaffold00117 314110 1 C A scaffold5675 Both SNP 0030.scaffold00117 314266 1 T C scaffold5675 Both SNP 0030.scaffold00117 314293 1 T C scaffold5675 Both INDEL 0030.scaffold00117 314344 2 .. TA scaffold5675 Both SNP 0030.scaffold00117 314374 1 C G scaffold5675 ReadM INDEL 0030.scaffold00117 314525 3 ATA ... - ReadM SNP 0030.scaffold00117 314632 1 G A - ReadM SNP 0030.scaffold00117 314730 1 C T - ReadM SNP 0030.scaffold00117 314907 1 A G - ReadM INDEL 0030.scaffold00117 315047 1 T . - ReadM SNP 0030.scaffold00117 315164 1 G A - ReadM SNP 0030.scaffold00117 315306 1 A G - ReadM SNP 0030.scaffold00117 315338 1 T G - ReadM SNP 0030.scaffold00117 315937 1 C A - ReadM SNP 0030.scaffold00117 315942 1 C T - ReadM SNP 0030.scaffold00117 316047 1 A G - ReadM SNP 0030.scaffold00117 316107 1 A G - ReadM SNP 0030.scaffold00117 316115 1 G A - ReadM SNP 0030.scaffold00117 316141 1 C T - ReadM INDEL 0030.scaffold00117 316283 3 TGA ... - ReadM SNP 0030.scaffold00117 316380 1 G A - ReadM INDEL 0030.scaffold00117 316523 1 T . - ReadM SNP 0030.scaffold00117 316569 1 A G - ReadM SNP 0030.scaffold00117 316659 1 T C - ReadM SNP 0030.scaffold00117 316916 1 G A - ReadM SNP 0030.scaffold00117 318161 1 G A - ReadM SNP 0030.scaffold00117 318166 1 C T - ReadM SNP 0030.scaffold00117 318250 1 G T - ReadM SNP 0030.scaffold00117 318520 1 T G - ReadM SNP 0030.scaffold00117 318640 1 G A - ReadM SNP 0030.scaffold00117 318723 1 A C - ReadM SNP 0030.scaffold00117 318749 1 T G - ReadM SNP 0030.scaffold00117 320760 1 T G - ReadM SNP 0030.scaffold00117 320786 1 T C - ReadM SNP 0030.scaffold00117 321036 1 A G - ReadM INDEL 0030.scaffold00117 321118 1 C . - ReadM SNP 0030.scaffold00117 321151 1 G T - ReadM INDEL 0030.scaffold00117 321194 1 T . - ReadM SNP 0030.scaffold00117 321238 1 T G - ReadM SNP 0030.scaffold00117 321280 1 A C - ReadM SNP 0030.scaffold00117 321444 1 A G - ReadM SNP 0030.scaffold00117 321490 1 C A - ReadM SNP 0030.scaffold00117 321518 1 C A - ReadM SNP 0030.scaffold00117 321596 1 G T - ReadM INDEL 0030.scaffold00117 321643 1 . G - ReadM SNP 0030.scaffold00117 321705 1 C T - ReadM SNP 0030.scaffold00117 321732 1 G A - ReadM SNP 0030.scaffold00117 322026 1 G T - ReadM SNP 0030.scaffold00117 322120 1 G A - ReadM SNP 0030.scaffold00117 322173 1 A G - ReadM SNP 0030.scaffold00117 322184 1 G A - ReadM SNP 0030.scaffold00117 322200 1 T C - ReadM INDEL 0030.scaffold00117 322291 1 . T - ReadM SNP 0030.scaffold00117 322530 1 C A - ReadM SNP 0030.scaffold00117 322686 1 A G - ReadM SNP 0030.scaffold00117 322713 1 G C - ReadM SNP 0030.scaffold00117 322964 1 T C - ReadM SNP 0030.scaffold00117 323050 1 G T - ReadM SNP 0030.scaffold00117 323055 1 A C - ReadM SNP 0030.scaffold00117 323279 1 C G - ReadM SNP 0030.scaffold00117 323536 1 C A - ReadM SNP 0030.scaffold00117 323801 1 G A - ReadM SNP 0030.scaffold00117 327872 1 A G - ReadM SNP 0030.scaffold00117 327965 1 C A - ReadM SNP 0030.scaffold00117 328053 1 G A - ReadM SNP 0030.scaffold00117 328089 1 C G - ReadM SNP 0030.scaffold00117 328144 1 T A - ReadM SNP 0030.scaffold00117 328150 1 T G - ReadM SNP 0030.scaffold00117 328307 1 T C - ReadM SNP 0030.scaffold00117 328502 1 C T - ReadM SNP 0030.scaffold00117 328567 1 T C - ReadM SNP 0030.scaffold00117 328674 1 T G - ReadM SNP 0030.scaffold00117 328677 1 C A - ReadM SNP 0030.scaffold00117 328831 1 G A - ReadM SNP 0030.scaffold00117 328998 1 A G - ReadM SNP 0030.scaffold00117 329000 1 G T - ReadM SNP 0030.scaffold00117 330787 1 T G - ScafM SNP 0030.scaffold00117 331544 1 T G scaffold5675 ScafM SNP 0030.scaffold00117 331572 1 C A scaffold5675 ScafM SNP 0030.scaffold00117 332684 1 A G scaffold851 ScafM SNP 0030.scaffold00117 332723 1 G A scaffold851 ScafM SNP 0030.scaffold00117 332725 1 G C scaffold851 ScafM SNP 0030.scaffold00117 332781 1 C T scaffold851 ScafM SNP 0030.scaffold00117 332837 1 T C scaffold851 ScafM SNP 0030.scaffold00117 332845 1 A G scaffold851 ScafM SNP 0030.scaffold00117 332926 1 C T scaffold851 ScafM SNP 0030.scaffold00117 332939 1 T C scaffold851 ScafM SNP 0030.scaffold00117 332958 1 G A scaffold851 ScafM SNP 0030.scaffold00117 333032 1 T G scaffold851 ScafM SNP 0030.scaffold00117 333050 1 T G scaffold851 ScafM INDEL 0030.scaffold00117 333088 1 C . scaffold41327 ScafM SNP 0030.scaffold00117 333101 1 C T scaffold41327 ScafM SNP 0030.scaffold00117 333125 1 G T scaffold41327 ScafM SNP 0030.scaffold00117 333154 2 TC CG scaffold41327 ScafM SNP 0030.scaffold00117 333163 1 G A scaffold41327 ScafM SNP 0030.scaffold00117 333175 1 C T scaffold41327 ScafM SNP 0030.scaffold00117 333177 1 G C scaffold41327 ScafM SNP 0030.scaffold00117 333182 1 C T scaffold41327 ScafM SNP 0030.scaffold00117 333184 1 A G scaffold41327 ScafM INDEL 0030.scaffold00117 333221 3 AGC ... scaffold41327 ScafM INDEL 0030.scaffold00117 333226 10 AAAAAAACAA .......... scaffold41327 ScafM INDEL 0030.scaffold00117 333273 2 TT .A scaffold41327 ScafM SNP 0030.scaffold00117 333276 1 T G scaffold41327 ScafM SNP 0030.scaffold00117 333280 1 G A scaffold41327 ScafM SNP 0030.scaffold00117 333286 1 G A scaffold41327 ScafM SNP 0030.scaffold00117 334000 1 A G scaffold5675 ScafM SNP 0030.scaffold00117 334027 1 A G scaffold5675 ScafM SNP 0030.scaffold00117 334042 1 G A scaffold5675 ScafM SNP 0030.scaffold00117 334141 1 A G scaffold5675 ReadM SNP 0030.scaffold00117 334513 1 A G - ReadM SNP 0030.scaffold00117 334540 1 A G - ReadM INDEL 0030.scaffold00117 334667 1 . T - ReadM SNP 0030.scaffold00117 334706 1 A T - ReadM SNP 0030.scaffold00117 334873 1 C G - ReadM SNP 0030.scaffold00117 334909 1 G A - ReadM SNP 0030.scaffold00117 334913 1 C T - ReadM SNP 0030.scaffold00117 334948 1 T C - ReadM SNP 0030.scaffold00117 335152 1 T G - ReadM SNP 0030.scaffold00117 335188 1 T C - ReadM SNP 0030.scaffold00117 335361 1 T C - ReadM SNP 0030.scaffold00117 335391 1 G C - ReadM SNP 0030.scaffold00117 335576 1 G C - ReadM SNP 0030.scaffold00117 335629 1 T C - ReadM SNP 0030.scaffold00117 335665 1 A C - ReadM SNP 0030.scaffold00117 335784 1 T C - ReadM SNP 0030.scaffold00117 335787 1 T G - Both SNP 0030.scaffold00117 335822 1 A G scaffold5675 Both SNP 0030.scaffold00117 335861 1 C A scaffold5675 ReadM SNP 0030.scaffold00117 335917 1 T A - ReadM SNP 0030.scaffold00117 335966 1 C A - ReadM SNP 0030.scaffold00117 336284 1 T C - ReadM SNP 0030.scaffold00117 337448 1 C A - ReadM SNP 0030.scaffold00117 337576 1 A C - ReadM SNP 0030.scaffold00117 337581 1 T C - ReadM SNP 0030.scaffold00117 337600 1 A C - ReadM SNP 0030.scaffold00117 337636 1 C G - ReadM SNP 0030.scaffold00117 337656 1 C T - ReadM INDEL 0030.scaffold00117 337746 2 AC .. - ReadM SNP 0030.scaffold00117 337834 1 T C - ReadM SNP 0030.scaffold00117 337942 1 C A - ReadM INDEL 0030.scaffold00117 337996 1 A . - ScafM SNP 0030.scaffold00117 338498 1 T A scaffold5675 ScafM SNP 0030.scaffold00117 338552 1 T C scaffold5675 ReadM SNP 0030.scaffold00117 339333 1 C T - ReadM INDEL 0030.scaffold00117 339377 1 . C - ReadM SNP 0030.scaffold00117 339421 1 G A - ReadM SNP 0030.scaffold00117 339694 1 T C - ScafM SNP 0030.scaffold00117 339947 1 A G scaffold5675 ScafM SNP 0030.scaffold00117 339998 2 TG CA scaffold5675 ScafM SNP 0030.scaffold00117 340014 1 T G scaffold5675 ScafM SNP 0030.scaffold00117 343519 1 G A scaffold73620 ScafM SNP 0030.scaffold00117 343569 1 G A scaffold73620 Both SNP 0030.scaffold00117 343576 1 T C scaffold73620 Both SNP 0030.scaffold00117 343636 1 A T scaffold73620 Both SNP 0030.scaffold00117 343638 1 G T scaffold73620 ReadM SNP 0030.scaffold00117 343674 1 A G - ReadM SNP 0030.scaffold00117 343713 1 G A - ReadM SNP 0030.scaffold00117 343843 1 C T - ReadM SNP 0030.scaffold00117 344043 1 G T - ScafM SNP 0030.scaffold00117 344197 1 A C scaffold73620 ScafM SNP 0030.scaffold00117 344269 1 T A scaffold73620 ScafM SNP 0030.scaffold00117 345907 1 T C scaffold73653 ScafM SNP 0030.scaffold00117 345932 1 G T scaffold73653 ScafM SNP 0030.scaffold00117 346098 1 G A scaffold73653 ScafM SNP 0030.scaffold00117 346105 1 T C scaffold73653 ScafM SNP 0030.scaffold00117 346183 1 T C scaffold73653 Both SNP 0030.scaffold00117 346356 1 G A scaffold73653 ReadM SNP 0030.scaffold00117 346486 1 A G - ReadM SNP 0030.scaffold00117 346496 1 T C - Both SNP 0030.scaffold00117 348112 1 T C scaffold216 ReadM INDEL 0030.scaffold00117 348162 1 A . - ReadM SNP 0030.scaffold00117 348188 1 C A - ReadM SNP 0030.scaffold00117 348294 1 A G - ReadM SNP 0030.scaffold00117 348307 1 C A - ReadM SNP 0030.scaffold00117 348333 1 G A - ReadM SNP 0030.scaffold00117 348485 1 A T - ReadM SNP 0030.scaffold00117 348491 1 A G - ReadM SNP 0030.scaffold00117 348579 1 A C - ReadM SNP 0030.scaffold00117 348635 1 C T - ReadM SNP 0030.scaffold00117 348648 1 G C - ReadM SNP 0030.scaffold00117 348681 1 G A - ReadM SNP 0030.scaffold00117 348717 1 A T - ReadM SNP 0030.scaffold00117 348971 1 G A - ReadM SNP 0030.scaffold00117 349001 1 G C - ReadM SNP 0030.scaffold00117 349059 1 C T - ReadM SNP 0030.scaffold00117 349061 1 G A - ReadM SNP 0030.scaffold00117 349263 1 A C - ReadM SNP 0030.scaffold00117 349265 1 A T - ReadM SNP 0030.scaffold00117 349337 1 A G - ReadM SNP 0030.scaffold00117 349366 1 T C - ReadM SNP 0030.scaffold00117 349735 1 T A - ReadM SNP 0030.scaffold00117 349772 1 T C - ReadM SNP 0030.scaffold00117 349793 1 A G - ReadM SNP 0030.scaffold00117 349895 1 G C - ReadM INDEL 0030.scaffold00117 349979 1 A . - Both SNP 0030.scaffold00117 350163 1 G A scaffold216 Both SNP 0030.scaffold00117 350229 1 C G scaffold216 Both SNP 0030.scaffold00117 350269 1 T C scaffold216 ReadM SNP 0030.scaffold00117 350441 1 G A - ReadM SNP 0030.scaffold00117 350579 1 T C - ReadM SNP 0030.scaffold00117 350636 1 C T - ReadM SNP 0030.scaffold00117 350702 1 G T - ReadM SNP 0030.scaffold00117 350758 1 T A - ReadM SNP 0030.scaffold00117 350765 1 G A - ReadM SNP 0030.scaffold00117 350783 1 G A - ReadM SNP 0030.scaffold00117 350845 1 C A - ReadM SNP 0030.scaffold00117 350869 1 T G - ReadM SNP 0030.scaffold00117 350890 1 G C - ReadM SNP 0030.scaffold00117 350910 1 A G - ReadM SNP 0030.scaffold00117 350917 1 G T - Both SNP 0030.scaffold00117 350993 1 G A scaffold216 Both SNP 0030.scaffold00117 351072 1 G T scaffold216 Both SNP 0030.scaffold00117 351694 1 T A scaffold216 Both SNP 0030.scaffold00117 351719 1 A G scaffold216 Both SNP 0030.scaffold00117 351732 1 G C scaffold216 ReadM SNP 0030.scaffold00117 352127 1 C T - ReadM SNP 0030.scaffold00117 352315 1 C T - ReadM SNP 0030.scaffold00117 352338 1 C G - ReadM SNP 0030.scaffold00117 352377 1 A G - ReadM SNP 0030.scaffold00117 352471 1 A G - ReadM SNP 0030.scaffold00117 352561 1 G A - ReadM SNP 0030.scaffold00117 352566 1 G T - ReadM SNP 0030.scaffold00117 352661 1 C A - ReadM SNP 0030.scaffold00117 352798 1 T A - Both SNP 0030.scaffold00117 352986 1 A C scaffold216 Both SNP 0030.scaffold00117 353133 1 C T scaffold216 Both SNP 0030.scaffold00117 353487 1 A T scaffold216 ReadM SNP 0030.scaffold00117 353760 1 G C - ReadM SNP 0030.scaffold00117 353782 1 T A - ReadM SNP 0030.scaffold00117 353790 1 G T - ReadM SNP 0030.scaffold00117 353811 1 G T - ScafM INDEL 0030.scaffold00117 353923 27 ........................... AGGAAAATAAAAAACATAGCAATATAA scaffold216 ScafM INDEL 0030.scaffold00117 353938 2 .. CA scaffold216 ScafM SNP 0030.scaffold00117 353998 1 C T scaffold216 ScafM INDEL 0030.scaffold00117 354067 1 A . scaffold216 ScafM SNP 0030.scaffold00117 354072 1 C G scaffold216 ScafM INDEL 0030.scaffold00117 354076 1 . A scaffold216 ScafM SNP 0030.scaffold00117 354098 1 C T scaffold216 ScafM SNP 0030.scaffold00117 354231 2 TG GA scaffold216 ScafM SNP 0030.scaffold00117 354659 1 A G scaffold216 ScafM SNP 0030.scaffold00117 354828 1 C T scaffold216 ScafM SNP 0030.scaffold00117 354861 1 T C scaffold216 Both SNP 0030.scaffold00117 355009 1 C T scaffold216 Both SNP 0030.scaffold00117 355061 1 C T scaffold216 Both SNP 0030.scaffold00117 355405 1 T C scaffold216 Both SNP 0030.scaffold00117 355523 1 G A scaffold216 Both SNP 0030.scaffold00117 355645 1 G C scaffold216 Both SNP 0030.scaffold00117 355661 1 C T scaffold216 ScafM INDEL 0030.scaffold00117 355918 10 CTGATTTAAT .......... scaffold216 ScafM INDEL 0030.scaffold00117 356244 5 ..... TTTTT scaffold216 ScafM INDEL 0030.scaffold00117 356642 1 . A scaffold216 ScafM INDEL 0030.scaffold00117 356649 1 . T scaffold216 Both SNP 0030.scaffold00117 357444 1 G C scaffold216 Both SNP 0030.scaffold00117 357490 1 T G scaffold216 Both SNP 0030.scaffold00117 357600 1 G A scaffold216 Both INDEL 0030.scaffold00117 357657 1 . T scaffold216 Both SNP 0030.scaffold00117 357773 1 T G scaffold216 Both SNP 0030.scaffold00117 357801 1 C T scaffold216 Both SNP 0030.scaffold00117 357964 1 A G scaffold216 Both SNP 0030.scaffold00117 358018 1 G T scaffold216 Both SNP 0030.scaffold00117 358143 1 G A scaffold216 Both SNP 0030.scaffold00117 358173 1 C T scaffold216 Both SNP 0030.scaffold00117 358176 1 G A scaffold216 Both SNP 0030.scaffold00117 358259 1 C A scaffold216 Both SNP 0030.scaffold00117 358529 1 T G scaffold216 Both INDEL 0030.scaffold00117 358545 1 A . scaffold216 Both SNP 0030.scaffold00117 358582 1 C T scaffold216 Both SNP 0030.scaffold00117 358658 1 T C scaffold216 Both SNP 0030.scaffold00117 358672 1 G A scaffold216 Both SNP 0030.scaffold00117 358746 1 T A scaffold216 Both SNP 0030.scaffold00117 358763 1 C G scaffold216 Both SNP 0030.scaffold00117 358901 1 A T scaffold216 Both SNP 0030.scaffold00117 359266 1 G A scaffold216 Both SNP 0030.scaffold00117 359319 1 C T scaffold216 Both SNP 0030.scaffold00117 359364 1 C A scaffold216 Both SNP 0030.scaffold00117 359468 1 C A scaffold216 Both SNP 0030.scaffold00117 359594 1 T C scaffold216 ReadM SNP 0030.scaffold00117 359685 1 G T - ReadM SNP 0030.scaffold00117 359724 1 A G - ReadM SNP 0030.scaffold00117 359733 1 C T - ReadM SNP 0030.scaffold00117 359878 1 G A - ReadM SNP 0030.scaffold00117 359901 1 G T - ReadM SNP 0030.scaffold00117 359933 1 A C - ReadM SNP 0030.scaffold00117 360003 1 A G - ReadM SNP 0030.scaffold00117 360192 1 G A - ReadM SNP 0030.scaffold00117 360614 1 C A - ReadM SNP 0030.scaffold00117 360678 1 C T - ReadM SNP 0030.scaffold00117 360755 1 C A - ReadM SNP 0030.scaffold00117 360798 1 G A - ScafM SNP 0030.scaffold00117 362106 1 C T scaffold216 ScafM SNP 0030.scaffold00117 362110 1 A G scaffold216 ScafM SNP 0030.scaffold00117 362145 1 A T scaffold216 ScafM INDEL 0030.scaffold00117 362454 1 A . scaffold216 ScafM INDEL 0030.scaffold00117 363307 1 . A scaffold216 ScafM INDEL 0030.scaffold00117 363339 1 . T scaffold216 ScafM SNP 0030.scaffold00117 363377 1 G A scaffold216 ScafM INDEL 0030.scaffold00117 363418 7 AAAAACA ....... scaffold216 ScafM SNP 0030.scaffold00117 363486 1 C T scaffold216 ScafM SNP 0030.scaffold00117 363667 1 A G scaffold216 Both SNP 0030.scaffold00117 364020 1 A T scaffold216 ScafM INDEL 0030.scaffold00117 364131 4 .... TATG scaffold216 Both SNP 0030.scaffold00117 364453 1 C G scaffold216 Both SNP 0030.scaffold00117 364475 1 A C scaffold216 Both SNP 0030.scaffold00117 364668 1 G A scaffold216 Both SNP 0030.scaffold00117 364712 1 T C scaffold216 Both SNP 0030.scaffold00117 364776 1 G A scaffold216 Both SNP 0030.scaffold00117 364967 1 G A scaffold216 ScafM SNP 0030.scaffold00117 365349 1 G A scaffold216 ScafM INDEL 0030.scaffold00117 365515 1 T . scaffold216 ScafM SNP 0030.scaffold00117 365563 1 C A scaffold216 ScafM SNP 0030.scaffold00117 367274 1 A T scaffold216 ScafM INDEL 0030.scaffold00117 367283 1 T . scaffold216 Both SNP 0030.scaffold00117 367441 1 A C scaffold216 Both SNP 0030.scaffold00117 367504 1 T C scaffold216 Both SNP 0030.scaffold00117 367660 1 A C scaffold216 Both SNP 0030.scaffold00117 367728 1 G A scaffold216 Both SNP 0030.scaffold00117 367755 1 A G scaffold216 Both SNP 0030.scaffold00117 367781 1 G A scaffold216 Both SNP 0030.scaffold00117 367791 1 A T scaffold216 ReadM SNP 0030.scaffold00117 367916 1 A T - ReadM SNP 0030.scaffold00117 368165 1 T A - ReadM SNP 0030.scaffold00117 368209 1 A C - ReadM SNP 0030.scaffold00117 368227 1 G T - ScafM SNP 0030.scaffold00117 370424 1 A C scaffold216 ScafM SNP 0030.scaffold00117 370457 1 T C scaffold216 ScafM SNP 0030.scaffold00117 370497 1 C T scaffold216 ScafM INDEL 0030.scaffold00117 370537 1 . A scaffold216 ScafM SNP 0030.scaffold00117 370736 1 G A scaffold216 ReadM SNP 0030.scaffold00117 371049 1 C A - Both SNP 0030.scaffold00117 371152 1 C T scaffold216 Both SNP 0030.scaffold00117 371160 1 A G scaffold216 ScafM INDEL 0030.scaffold00117 371238 5 CATGC ..... scaffold216 ScafM SNP 0030.scaffold00117 371248 1 T C scaffold216 ScafM SNP 0030.scaffold00117 371298 1 C T scaffold216 ScafM SNP 0030.scaffold00117 371402 1 G A scaffold12016 ScafM SNP 0030.scaffold00117 371418 1 T G scaffold12016 ScafM SNP 0030.scaffold00117 371420 1 T G scaffold12016 ScafM SNP 0030.scaffold00117 371453 1 C G scaffold12016 ScafM SNP 0030.scaffold00117 371465 1 T G scaffold12016 ScafM INDEL 0030.scaffold00117 371472 2 AA .. scaffold12016 ScafM SNP 0030.scaffold00117 371489 1 A T scaffold12016 ScafM SNP 0030.scaffold00117 371618 1 C T scaffold12016 ScafM SNP 0030.scaffold00117 371634 1 A T scaffold12016 ScafM SNP 0030.scaffold00117 371642 1 T A scaffold12016 ScafM SNP 0030.scaffold00117 371674 1 A G scaffold12016 ScafM SNP 0030.scaffold00117 372098 1 A G scaffold31958 ScafM SNP 0030.scaffold00117 372207 1 A T scaffold31958 ScafM SNP 0030.scaffold00117 372218 1 T C scaffold31958 ScafM SNP 0030.scaffold00117 372262 1 T C scaffold31958 ScafM SNP 0030.scaffold00117 372272 2 TC AT scaffold31958 ScafM SNP 0030.scaffold00117 372304 1 C G scaffold31958 ScafM SNP 0030.scaffold00117 372322 1 C T scaffold31958 ScafM SNP 0030.scaffold00117 372431 1 T G scaffold31958 ReadM SNP 0030.scaffold00117 372517 1 C T - ReadM SNP 0030.scaffold00117 372658 1 G A - ReadM SNP 0030.scaffold00117 373534 1 T C - ReadM SNP 0030.scaffold00117 373679 1 C A - ReadM SNP 0030.scaffold00117 373710 1 A G - ReadM SNP 0030.scaffold00117 373802 1 A T - ReadM SNP 0030.scaffold00117 373813 1 G A - ReadM SNP 0030.scaffold00117 373987 1 C A - ReadM SNP 0030.scaffold00117 374089 1 G A - ReadM SNP 0030.scaffold00117 374296 1 A G - ReadM SNP 0030.scaffold00117 374316 1 T G - ReadM SNP 0030.scaffold00117 374477 1 G A - ReadM SNP 0030.scaffold00117 374606 1 G A - ReadM SNP 0030.scaffold00117 374638 1 A G - ReadM SNP 0030.scaffold00117 374644 1 C T - Both SNP 0030.scaffold00117 374766 1 G A scaffold216 Both SNP 0030.scaffold00117 374876 1 C G scaffold216 Both SNP 0030.scaffold00117 374946 2 AA GG scaffold216 Both SNP 0030.scaffold00117 374993 1 G A scaffold216 Both SNP 0030.scaffold00117 375020 1 A C scaffold216 Both SNP 0030.scaffold00117 375156 1 A T scaffold216 Both SNP 0030.scaffold00117 375224 1 C G scaffold216 Both SNP 0030.scaffold00117 375294 1 T A scaffold216 Both SNP 0030.scaffold00117 375365 1 T C scaffold216 Both INDEL 0030.scaffold00117 375394 2 .. TA scaffold216 Both SNP 0030.scaffold00117 375583 1 A C scaffold216 Both SNP 0030.scaffold00117 375764 1 C G scaffold216 Both SNP 0030.scaffold00117 375789 1 T A scaffold216 ScafM SNP 0030.scaffold00117 375809 1 G A scaffold216 ScafM SNP 0030.scaffold00117 375813 1 A G scaffold216 Both SNP 0030.scaffold00117 375967 1 C G scaffold216 Both SNP 0030.scaffold00117 375973 1 A T scaffold216 Both SNP 0030.scaffold00117 376062 1 C A scaffold216 Both SNP 0030.scaffold00117 376322 1 G T scaffold216 Both SNP 0030.scaffold00117 376349 1 A T scaffold216 ScafM INDEL 0030.scaffold00117 376374 3 TTT ..G scaffold216 Both SNP 0030.scaffold00117 376405 1 G A scaffold216 Both SNP 0030.scaffold00117 376434 1 C T scaffold216 Both SNP 0030.scaffold00117 376567 1 C T scaffold216 ReadM SNP 0030.scaffold00117 376699 1 A G - ReadM SNP 0030.scaffold00117 376734 1 A T - ReadM INDEL 0030.scaffold00117 376789 1 . T - Both INDEL 0030.scaffold00117 376864 1 . T scaffold216 Both INDEL 0030.scaffold00117 376937 3 TTT ... scaffold216 Both SNP 0030.scaffold00117 376997 1 C T scaffold216 Both INDEL 0030.scaffold00117 377115 1 T . scaffold216 Both SNP 0030.scaffold00117 377126 1 T C scaffold216 Both SNP 0030.scaffold00117 377149 1 T C scaffold216 Both SNP 0030.scaffold00117 377158 1 C T scaffold216 Both SNP 0030.scaffold00117 377313 1 T A scaffold216 Both SNP 0030.scaffold00117 377493 1 C T scaffold216 Both SNP 0030.scaffold00117 377639 1 C T scaffold216 Both SNP 0030.scaffold00117 377875 1 T G scaffold216 Both SNP 0030.scaffold00117 377973 1 A G scaffold216 Both SNP 0030.scaffold00117 378023 1 C T scaffold216 Both SNP 0030.scaffold00117 378407 1 C T scaffold216 Both SNP 0030.scaffold00117 378574 1 G A scaffold216 Both SNP 0030.scaffold00117 378632 1 C G scaffold216 Both SNP 0030.scaffold00117 378729 1 T C scaffold216 Both SNP 0030.scaffold00117 378903 1 T C scaffold216 Both SNP 0030.scaffold00117 378923 1 C T scaffold216 Both SNP 0030.scaffold00117 379079 1 A G scaffold216 ReadM SNP 0030.scaffold00117 379317 1 G A - Both SNP 0030.scaffold00117 379422 1 T C scaffold216 Both SNP 0030.scaffold00117 379688 1 C T scaffold216 Both SNP 0030.scaffold00117 379899 1 A T scaffold216 Both SNP 0030.scaffold00117 380034 1 G C scaffold216 Both SNP 0030.scaffold00117 380233 1 T C scaffold216 Both SNP 0030.scaffold00117 380331 1 C A scaffold216 Both SNP 0030.scaffold00117 380342 1 C T scaffold216 Both SNP 0030.scaffold00117 380471 1 C A scaffold216 Both SNP 0030.scaffold00117 380501 1 G T scaffold216 Both SNP 0030.scaffold00117 380607 1 T G scaffold216 Both SNP 0030.scaffold00117 380656 1 G A scaffold216 Both SNP 0030.scaffold00117 380912 1 G A scaffold216 Both INDEL 0030.scaffold00117 381055 1 . A scaffold216 ScafM SNP 0030.scaffold00117 381058 1 C A scaffold216 Both SNP 0030.scaffold00117 381105 1 G A scaffold216 Both SNP 0030.scaffold00117 381120 1 C T scaffold216 Both SNP 0030.scaffold00117 381438 1 A G scaffold216 Both SNP 0030.scaffold00117 381479 1 A T scaffold216 ScafM SNP 0030.scaffold00117 381593 2 AA TT scaffold216 ScafM SNP 0030.scaffold00117 381601 1 C T scaffold216 Both SNP 0030.scaffold00117 381641 1 A T scaffold216 ScafM INDEL 0030.scaffold00117 381766 2 .. AA scaffold216 ReadM SNP 0030.scaffold00117 381786 1 G C - Both SNP 0030.scaffold00117 381901 1 C T scaffold216 ScafM SNP 0030.scaffold00117 381931 1 A T scaffold216 ScafM SNP 0030.scaffold00117 381946 1 T A scaffold216 Both SNP 0030.scaffold00117 381977 1 C A scaffold216 Both SNP 0030.scaffold00117 382038 1 T A scaffold216 Both SNP 0030.scaffold00117 382066 1 A T scaffold216 Both SNP 0030.scaffold00117 382201 1 A T scaffold216 Both SNP 0030.scaffold00117 382210 1 A G scaffold216 Both SNP 0030.scaffold00117 382241 1 T C scaffold216 Both SNP 0030.scaffold00117 382285 1 C T scaffold216 ScafM SNP 0030.scaffold00117 382310 2 CG TC scaffold216 Both SNP 0030.scaffold00117 382420 1 G A scaffold216 Both SNP 0030.scaffold00117 382482 1 A T scaffold216 Both SNP 0030.scaffold00117 382487 1 C T scaffold216 Both SNP 0030.scaffold00117 382518 1 C T scaffold216 Both SNP 0030.scaffold00117 382558 1 A G scaffold216 Both SNP 0030.scaffold00117 382566 1 T C scaffold216 Both SNP 0030.scaffold00117 382731 1 G A scaffold216 Both SNP 0030.scaffold00117 382816 1 C T scaffold216 Both SNP 0030.scaffold00117 382901 1 A G scaffold216 Both SNP 0030.scaffold00117 382989 1 C T scaffold216 Both SNP 0030.scaffold00117 383120 1 T A scaffold216 Both SNP 0030.scaffold00117 383130 1 C A scaffold216 Both SNP 0030.scaffold00117 383386 1 G C scaffold216 Both SNP 0030.scaffold00117 383407 1 A G scaffold216 Both SNP 0030.scaffold00117 383476 1 C G scaffold216 Both SNP 0030.scaffold00117 383492 1 C T scaffold216 Both SNP 0030.scaffold00117 383646 1 A G scaffold216 Both SNP 0030.scaffold00117 383737 1 G A scaffold216 ScafM SNP 0030.scaffold00117 383753 1 A G scaffold216 Both SNP 0030.scaffold00117 383943 1 A C scaffold216 Both INDEL 0030.scaffold00117 383961 1 T . scaffold216 Both SNP 0030.scaffold00117 384049 1 C T scaffold216 Both SNP 0030.scaffold00117 384154 1 A G scaffold216 ReadM SNP 0030.scaffold00117 384190 1 A T - ScafM SNP 0030.scaffold00117 384287 1 C T scaffold216 Both SNP 0030.scaffold00117 384319 1 G A scaffold216 Both SNP 0030.scaffold00117 384325 1 T C scaffold216 Both SNP 0030.scaffold00117 384428 1 A C scaffold216 Both SNP 0030.scaffold00117 384442 1 A G scaffold216 Both SNP 0030.scaffold00117 384458 1 A C scaffold216 ScafM SNP 0030.scaffold00117 384477 1 G C scaffold216 Both SNP 0030.scaffold00117 384499 1 A G scaffold216 Both SNP 0030.scaffold00117 384502 1 A G scaffold216 Both INDEL 0030.scaffold00117 384551 1 G . scaffold216 Both SNP 0030.scaffold00117 384718 1 A T scaffold216 Both SNP 0030.scaffold00117 384731 1 T C scaffold216 ReadM SNP 0030.scaffold00117 384882 1 C G - ReadM SNP 0030.scaffold00117 384940 1 G T - ReadM SNP 0030.scaffold00117 384979 1 A G - ReadM SNP 0030.scaffold00117 384985 1 G A - ReadM INDEL 0030.scaffold00117 385086 1 . A - Both SNP 0030.scaffold00117 385137 1 T C scaffold216 Both SNP 0030.scaffold00117 385252 1 T G scaffold216 Both SNP 0030.scaffold00117 385321 1 T C scaffold216 Both SNP 0030.scaffold00117 385360 1 A G scaffold216 Both SNP 0030.scaffold00117 385435 1 A T scaffold216 Both SNP 0030.scaffold00117 385577 1 G A scaffold216 ScafM INDEL 0030.scaffold00117 385730 1 . T scaffold216 Both SNP 0030.scaffold00117 385735 1 A T scaffold216 ScafM SNP 0030.scaffold00117 385791 1 G T scaffold216 ScafM SNP 0030.scaffold00117 385793 1 C A scaffold216 Both SNP 0030.scaffold00117 385883 1 C A scaffold216 Both SNP 0030.scaffold00117 385951 1 A T scaffold216 Both INDEL 0030.scaffold00117 386115 1 . T scaffold216 ScafM SNP 0030.scaffold00117 386122 1 G T scaffold216 ReadM SNP 0030.scaffold00117 386149 1 C T - ReadM SNP 0030.scaffold00117 386343 1 G A - ReadM SNP 0030.scaffold00117 386367 1 G C - Both SNP 0030.scaffold00117 386493 1 C T scaffold216 Both INDEL 0030.scaffold00117 386498 1 . A scaffold216 Both SNP 0030.scaffold00117 386735 1 G C scaffold216 Both SNP 0030.scaffold00117 386795 1 T A scaffold216 Both SNP 0030.scaffold00117 386809 1 A G scaffold216 ScafM SNP 0030.scaffold00117 386945 1 C T scaffold216 ScafM SNP 0030.scaffold00117 386950 1 C A scaffold216 ScafM SNP 0030.scaffold00117 386954 1 G T scaffold216 ScafM INDEL 0030.scaffold00117 386958 6 ...... ATTTCT scaffold216 Both SNP 0030.scaffold00117 386988 1 T C scaffold216 Both SNP 0030.scaffold00117 387054 1 G T scaffold216 Both SNP 0030.scaffold00117 387157 1 G A scaffold216 Both SNP 0030.scaffold00117 387213 1 C A scaffold216 Both SNP 0030.scaffold00117 387345 1 T C scaffold216 Both SNP 0030.scaffold00117 387500 1 G A scaffold216 Both SNP 0030.scaffold00117 387583 1 G A scaffold216 Both SNP 0030.scaffold00117 387674 1 C G scaffold216 Both INDEL 0030.scaffold00117 388179 1 . A scaffold216 Both SNP 0030.scaffold00117 388306 1 G A scaffold216 Both SNP 0030.scaffold00117 388371 1 G A scaffold216 Both SNP 0030.scaffold00117 388379 1 A G scaffold216 Both SNP 0030.scaffold00117 388399 1 C G scaffold216 Both SNP 0030.scaffold00117 388424 1 C T scaffold216 Both SNP 0030.scaffold00117 388491 1 A C scaffold216 Both SNP 0030.scaffold00117 388524 1 G A scaffold216 ScafM SNP 0030.scaffold00117 388540 1 A G scaffold216 Both SNP 0030.scaffold00117 388562 1 A C scaffold216 Both INDEL 0030.scaffold00117 388564 1 . A scaffold216 Both SNP 0030.scaffold00117 388613 1 G A scaffold216 Both SNP 0030.scaffold00117 388658 1 T C scaffold216 Both SNP 0030.scaffold00117 388736 1 C T scaffold216 ReadM SNP 0030.scaffold00117 388907 1 A G - Both SNP 0030.scaffold00117 389007 1 C G scaffold216 ScafM SNP 0030.scaffold00117 389014 2 CG TC scaffold216 Both SNP 0030.scaffold00117 389312 1 A G scaffold216 Both SNP 0030.scaffold00117 389450 1 T C scaffold216 Both SNP 0030.scaffold00117 389608 1 G A scaffold216 Both SNP 0030.scaffold00117 389633 1 G T scaffold216 ReadM SNP 0030.scaffold00117 389915 1 A C - ReadM SNP 0030.scaffold00117 390206 1 T G - Both SNP 0030.scaffold00117 390268 1 T A scaffold216 Both SNP 0030.scaffold00117 390301 1 C T scaffold216 Both SNP 0030.scaffold00117 390619 1 A T scaffold216 ReadM INDEL 0030.scaffold00117 390652 1 T . - ScafM SNP 0030.scaffold00117 390778 1 A G scaffold216 Both SNP 0030.scaffold00117 390911 1 C A scaffold216 Both SNP 0030.scaffold00117 391077 1 A G scaffold216 Both SNP 0030.scaffold00117 391166 1 A G scaffold216 ReadM SNP 0030.scaffold00117 391377 1 C T - ReadM SNP 0030.scaffold00117 391402 1 A G - ReadM INDEL 0030.scaffold00117 391411 1 T . - ScafM SNP 0030.scaffold00117 391435 1 A G scaffold216 ScafM SNP 0030.scaffold00117 391445 1 C A scaffold216 ScafM SNP 0030.scaffold00117 391453 1 T C scaffold216 ScafM SNP 0030.scaffold00117 391458 1 G T scaffold216 ScafM SNP 0030.scaffold00117 391519 1 G A scaffold216 ScafM SNP 0030.scaffold00117 391528 1 A C scaffold216 Both SNP 0030.scaffold00117 391761 1 T G scaffold216 ReadM SNP 0030.scaffold00117 391917 1 A C - ReadM SNP 0030.scaffold00117 392021 1 C A - Both SNP 0030.scaffold00117 392053 1 G A scaffold216 Both INDEL 0030.scaffold00117 392059 1 . T scaffold216 ScafM SNP 0030.scaffold00117 392135 1 T C scaffold216 Both SNP 0030.scaffold00117 392225 1 G C scaffold216 ScafM SNP 0030.scaffold00117 392856 1 A G scaffold216 ScafM INDEL 0030.scaffold00117 392902 1 A . scaffold216 Both SNP 0030.scaffold00117 393029 1 T C scaffold216 Both SNP 0030.scaffold00117 393044 1 T G scaffold216 ScafM SNP 0030.scaffold00117 393127 1 A T scaffold216 Both SNP 0030.scaffold00117 393202 1 C G scaffold216 Both SNP 0030.scaffold00117 393321 1 C A scaffold216 Both SNP 0030.scaffold00117 393347 1 T C scaffold216 Both SNP 0030.scaffold00117 393401 1 T A scaffold216 ScafM SNP 0030.scaffold00117 393518 1 G A scaffold216 Both SNP 0030.scaffold00117 393552 2 TG CA scaffold216 Both SNP 0030.scaffold00117 393632 1 T C scaffold216 ScafM INDEL 0030.scaffold00117 393697 11 ........... CTGGATTGGAC scaffold216 ScafM SNP 0030.scaffold00117 393710 1 T C scaffold216 ScafM SNP 0030.scaffold00117 393715 1 C A scaffold216 Both SNP 0030.scaffold00117 393754 1 C A scaffold216 Both SNP 0030.scaffold00117 393789 1 T C scaffold216 Both SNP 0030.scaffold00117 393832 1 G A scaffold216 Both SNP 0030.scaffold00117 393856 1 T C scaffold216 ScafM SNP 0030.scaffold00117 394042 1 T C scaffold216 ReadM INDEL 0030.scaffold00117 394049 1 A . - ReadM SNP 0030.scaffold00117 394284 1 G T - ReadM SNP 0030.scaffold00117 394828 1 A C - ReadM INDEL 0030.scaffold00117 394912 1 A . - ReadM SNP 0030.scaffold00117 394938 1 T C - ReadM SNP 0030.scaffold00117 394999 1 T C - ReadM INDEL 0030.scaffold00117 395005 1 . A - ScafM SNP 0030.scaffold00117 395136 1 T C scaffold216 ScafM SNP 0030.scaffold00117 395144 1 A G scaffold216 ScafM SNP 0030.scaffold00117 395152 1 T A scaffold216 ScafM SNP 0030.scaffold00117 395164 1 C G scaffold216 ScafM SNP 0030.scaffold00117 395249 1 T C scaffold216 ReadM SNP 0030.scaffold00117 396272 1 G A - ReadM SNP 0030.scaffold00117 396659 1 C T - ReadM SNP 0030.scaffold00117 396732 1 A C - ReadM SNP 0030.scaffold00117 396980 1 G A - ReadM SNP 0030.scaffold00117 397004 1 C A - ReadM SNP 0030.scaffold00117 397073 1 T G - ReadM SNP 0030.scaffold00117 397169 1 C G - ReadM SNP 0030.scaffold00117 397311 1 T G - ReadM SNP 0030.scaffold00117 397613 1 A G - ReadM SNP 0030.scaffold00117 397744 1 T C - ReadM SNP 0030.scaffold00117 397779 1 G C - ReadM SNP 0030.scaffold00117 398040 1 A G - ReadM SNP 0030.scaffold00117 398106 1 A G - ReadM SNP 0030.scaffold00117 398332 1 A G - ReadM SNP 0030.scaffold00117 398466 1 C T - ReadM SNP 0030.scaffold00117 398515 1 G A - ReadM SNP 0030.scaffold00117 398748 1 A G - ReadM SNP 0030.scaffold00117 398793 1 C A - ReadM SNP 0030.scaffold00117 398876 1 A G - ReadM SNP 0030.scaffold00117 399255 1 C T - ReadM SNP 0030.scaffold00117 399673 1 A G - ScafM SNP 0030.scaffold00117 400184 1 C T scaffold847 Both SNP 0030.scaffold00117 400236 1 T C scaffold847 ScafM SNP 0030.scaffold00117 400333 1 A C scaffold847 ScafM INDEL 0030.scaffold00117 400389 2 TA .. scaffold847 ScafM INDEL 0030.scaffold00117 400394 1 C . scaffold847 Both SNP 0030.scaffold00117 400510 1 T C scaffold847 Both INDEL 0030.scaffold00117 400623 1 T . scaffold847 ScafM SNP 0030.scaffold00117 400640 1 G A scaffold847 Both SNP 0030.scaffold00117 400780 1 A T scaffold847 Both SNP 0030.scaffold00117 400790 1 G A scaffold847 Both SNP 0030.scaffold00117 400916 1 T G scaffold847 Both SNP 0030.scaffold00117 401060 1 G C scaffold847 ScafM SNP 0030.scaffold00117 401180 1 A G scaffold847 ScafM SNP 0030.scaffold00117 401205 1 C T scaffold847 ReadM SNP 0030.scaffold00117 401507 1 A G - ReadM SNP 0030.scaffold00117 401563 1 T G - ScafM SNP 0030.scaffold00117 402596 1 C A scaffold847 ScafM INDEL 0030.scaffold00117 402641 1 T . scaffold847 ScafM SNP 0030.scaffold00117 402713 1 G T scaffold847 ScafM SNP 0030.scaffold00117 402731 2 AA TT scaffold847 ScafM SNP 0030.scaffold00117 402747 1 T C scaffold847 ScafM SNP 0030.scaffold00117 402793 1 T C scaffold847 ScafM SNP 0030.scaffold00117 402802 1 T G scaffold847 ScafM SNP 0030.scaffold00117 402822 1 T A scaffold847 ScafM SNP 0030.scaffold00117 402845 1 T A scaffold847 ScafM SNP 0030.scaffold00117 402863 1 G T scaffold847 ScafM SNP 0030.scaffold00117 402908 1 C G scaffold847 ScafM INDEL 0030.scaffold00117 402943 1 . A scaffold847 ScafM SNP 0030.scaffold00117 402955 1 C G scaffold847 ScafM SNP 0030.scaffold00117 403019 1 T G scaffold847 ScafM SNP 0030.scaffold00117 403035 1 T A scaffold847 Both SNP 0030.scaffold00117 403056 1 C T scaffold847 ScafM INDEL 0030.scaffold00117 403188 11 ........... TGGGTACAAAG scaffold847 ScafM SNP 0030.scaffold00117 403218 1 C G scaffold847 ScafM SNP 0030.scaffold00117 403332 1 G A scaffold847 ScafM SNP 0030.scaffold00117 403386 1 G T scaffold847 ScafM SNP 0030.scaffold00117 403388 1 T G scaffold847 ScafM SNP 0030.scaffold00117 403396 1 T C scaffold847 ScafM SNP 0030.scaffold00117 403414 1 T C scaffold847 ScafM SNP 0030.scaffold00117 403416 1 A G scaffold847 Both SNP 0030.scaffold00117 403421 1 A G scaffold847 ScafM INDEL 0030.scaffold00117 403431 1 . T scaffold847 ScafM SNP 0030.scaffold00117 403438 1 C T scaffold847 ScafM SNP 0030.scaffold00117 403443 1 T C scaffold847 Both SNP 0030.scaffold00117 403461 1 A G scaffold847 ScafM SNP 0030.scaffold00117 403465 1 G A scaffold847 ScafM SNP 0030.scaffold00117 403470 1 G T scaffold847 ReadM SNP 0030.scaffold00117 403471 1 T C - ScafM SNP 0030.scaffold00117 403474 1 T C scaffold847 ScafM SNP 0030.scaffold00117 403488 1 C G scaffold847 ScafM SNP 0030.scaffold00117 403491 1 A G scaffold847 Both SNP 0030.scaffold00117 403514 1 G A scaffold847 ScafM SNP 0030.scaffold00117 403516 2 AC GT scaffold847 ScafM SNP 0030.scaffold00117 403526 1 G A scaffold847 ScafM SNP 0030.scaffold00117 403538 1 C T scaffold847 ScafM INDEL 0030.scaffold00117 403545 1 A . scaffold847 ScafM SNP 0030.scaffold00117 403575 1 C T scaffold847 ScafM SNP 0030.scaffold00117 403582 1 A G scaffold847 ScafM SNP 0030.scaffold00117 403604 1 G A scaffold847 ScafM SNP 0030.scaffold00117 403615 2 TC GG scaffold847 ReadM SNP 0030.scaffold00117 403616 1 C G - ScafM SNP 0030.scaffold00117 403622 1 C T scaffold847 ScafM SNP 0030.scaffold00117 403644 2 GG TA scaffold847 ScafM SNP 0030.scaffold00117 403696 1 G A scaffold847 ReadM SNP 0030.scaffold00117 403705 1 A G - ScafM SNP 0030.scaffold00117 403723 1 A C scaffold847 ScafM SNP 0030.scaffold00117 403746 1 G C scaffold847 ReadM SNP 0030.scaffold00117 403784 1 T A - ReadM SNP 0030.scaffold00117 404121 1 C T - ReadM SNP 0030.scaffold00117 404142 1 A G - ReadM SNP 0030.scaffold00117 404154 1 T A - ReadM INDEL 0030.scaffold00117 404235 1 G . - Both SNP 0030.scaffold00117 404259 1 A T scaffold847 Both SNP 0030.scaffold00117 404284 1 A G scaffold847 Both SNP 0030.scaffold00117 404302 1 T G scaffold847 Both SNP 0030.scaffold00117 404367 1 T C scaffold847 Both SNP 0030.scaffold00117 404401 1 C T scaffold847 Both SNP 0030.scaffold00117 404410 1 T A scaffold847 Both SNP 0030.scaffold00117 404443 1 C T scaffold847 Both SNP 0030.scaffold00117 404581 1 G A scaffold847 Both SNP 0030.scaffold00117 404726 1 T G scaffold847 Both SNP 0030.scaffold00117 404879 1 G A scaffold847 Both SNP 0030.scaffold00117 404888 1 G C scaffold847 ScafM SNP 0030.scaffold00117 405008 1 C T scaffold847 ReadM SNP 0030.scaffold00117 405191 1 C A - ReadM SNP 0030.scaffold00117 405206 1 A G - ReadM INDEL 0030.scaffold00117 405516 1 T . - ReadM SNP 0030.scaffold00117 405670 1 A G - ReadM SNP 0030.scaffold00117 405776 1 G C - ReadM SNP 0030.scaffold00117 405823 1 T G - ReadM SNP 0030.scaffold00117 405840 1 C A - ReadM SNP 0030.scaffold00117 406031 1 C T - ReadM SNP 0030.scaffold00117 406105 1 C T - ReadM SNP 0030.scaffold00117 406127 1 A G - ReadM SNP 0030.scaffold00117 406156 1 C A - ReadM SNP 0030.scaffold00117 406172 1 T C - ReadM SNP 0030.scaffold00117 406295 1 C T - ReadM SNP 0030.scaffold00117 406530 1 A C - Both SNP 0030.scaffold00117 406672 1 C T scaffold847 Both SNP 0030.scaffold00117 406701 1 T G scaffold847 Both SNP 0030.scaffold00117 406709 1 T C scaffold847 ReadM SNP 0030.scaffold00117 407045 1 A C - Both SNP 0030.scaffold00117 407294 1 C T scaffold847 Both SNP 0030.scaffold00117 407355 1 A T scaffold847 Both SNP 0030.scaffold00117 407780 1 A G scaffold847 Both SNP 0030.scaffold00117 407789 1 C A scaffold847 Both SNP 0030.scaffold00117 407875 1 A G scaffold847 Both SNP 0030.scaffold00117 407880 1 A C scaffold847 ScafM SNP 0030.scaffold00117 407993 1 A C scaffold847 ScafM SNP 0030.scaffold00117 408026 1 G T scaffold847 ScafM SNP 0030.scaffold00117 408031 1 C T scaffold847 ScafM SNP 0030.scaffold00117 408049 1 G A scaffold847 ReadM SNP 0030.scaffold00117 412148 1 A C - ReadM SNP 0030.scaffold00117 412218 1 A T - ReadM SNP 0030.scaffold00117 412221 1 T C - ReadM SNP 0030.scaffold00117 412319 1 C T - ReadM SNP 0030.scaffold00117 412474 1 T G - ReadM SNP 0030.scaffold00117 412633 1 A G - ReadM SNP 0030.scaffold00117 412662 1 T C - ReadM SNP 0030.scaffold00117 412761 1 T C - ReadM SNP 0030.scaffold00117 413076 1 A G - ReadM SNP 0030.scaffold00117 413113 1 C T - ReadM SNP 0030.scaffold00117 416416 1 T G - ReadM SNP 0030.scaffold00117 416473 1 C A - ReadM SNP 0030.scaffold00117 416498 1 A G - ReadM SNP 0030.scaffold00117 416903 1 C T - ReadM SNP 0030.scaffold00117 417401 1 T C - ReadM SNP 0030.scaffold00117 417427 1 C T - ScafM SNP 0030.scaffold00117 417944 1 T C scaffold2551 ReadM SNP 0030.scaffold00117 420927 1 T C - ReadM SNP 0030.scaffold00117 420957 1 T A - Both SNP 0030.scaffold00117 421152 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 421186 1 T A scaffold2551 ScafM SNP 0030.scaffold00117 421192 1 A T scaffold2551 Both SNP 0030.scaffold00117 421216 1 T G scaffold2551 Both SNP 0030.scaffold00117 421238 1 G A scaffold2551 Both SNP 0030.scaffold00117 421257 1 T C scaffold2551 Both SNP 0030.scaffold00117 421438 1 G T scaffold2551 Both SNP 0030.scaffold00117 421543 1 A G scaffold2551 Both SNP 0030.scaffold00117 421697 1 T C scaffold2551 Both SNP 0030.scaffold00117 421722 1 C T scaffold2551 Both INDEL 0030.scaffold00117 421787 1 T . scaffold2551 Both INDEL 0030.scaffold00117 421925 2 .. GT scaffold2551 Both SNP 0030.scaffold00117 421949 1 T A scaffold2551 Both SNP 0030.scaffold00117 421956 1 C T scaffold2551 Both SNP 0030.scaffold00117 422035 1 C T scaffold2551 Both INDEL 0030.scaffold00117 422218 1 A . scaffold2551 Both SNP 0030.scaffold00117 422255 1 G A scaffold2551 Both SNP 0030.scaffold00117 422388 1 A T scaffold2551 Both SNP 0030.scaffold00117 422399 1 T C scaffold2551 Both SNP 0030.scaffold00117 422411 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 422478 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 422480 1 G T scaffold2551 Both INDEL 0030.scaffold00117 422538 1 A . scaffold2551 Both SNP 0030.scaffold00117 422588 1 C T scaffold2551 ReadM SNP 0030.scaffold00117 422735 1 A G - Both SNP 0030.scaffold00117 422848 1 C G scaffold2551 Both SNP 0030.scaffold00117 422871 1 G A scaffold2551 Both SNP 0030.scaffold00117 423135 1 C T scaffold2551 Both SNP 0030.scaffold00117 423248 1 G A scaffold2551 Both SNP 0030.scaffold00117 423366 1 A G scaffold2551 Both SNP 0030.scaffold00117 423409 1 C A scaffold2551 Both SNP 0030.scaffold00117 423472 1 A G scaffold2551 Both SNP 0030.scaffold00117 423514 1 T C scaffold2551 Both SNP 0030.scaffold00117 423676 1 A G scaffold2551 Both SNP 0030.scaffold00117 423857 1 C A scaffold2551 Both SNP 0030.scaffold00117 423876 1 T A scaffold2551 Both SNP 0030.scaffold00117 424101 1 G T scaffold2551 ScafM SNP 0030.scaffold00117 424202 1 G C scaffold2551 ScafM INDEL 0030.scaffold00117 424313 16 ................ TATAAAAATCATTCCA scaffold2551 ScafM INDEL 0030.scaffold00117 424316 1 . G scaffold2551 ScafM INDEL 0030.scaffold00117 424319 15 ............... GTAGAATGTTTTTCT scaffold2551 ScafM SNP 0030.scaffold00117 429779 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 429807 1 G A scaffold2551 ScafM INDEL 0030.scaffold00117 429963 2 AT .. scaffold2551 ScafM SNP 0030.scaffold00117 430028 1 G A scaffold2551 Both SNP 0030.scaffold00117 430189 1 T A scaffold2551 ReadM SNP 0030.scaffold00117 430236 1 C T - Both SNP 0030.scaffold00117 430614 1 G C scaffold2551 Both SNP 0030.scaffold00117 430734 1 G A scaffold2551 ReadM INDEL 0030.scaffold00117 430743 1 T . - ReadM SNP 0030.scaffold00117 430802 1 T C - ReadM SNP 0030.scaffold00117 431012 1 C G - ReadM SNP 0030.scaffold00117 431049 1 T A - ReadM SNP 0030.scaffold00117 431343 1 C A - ReadM SNP 0030.scaffold00117 431439 1 A G - ReadM SNP 0030.scaffold00117 431630 1 T C - ScafM SNP 0030.scaffold00117 434948 1 C T scaffold2551 ScafM INDEL 0030.scaffold00117 435051 2 .. GA scaffold2551 ScafM INDEL 0030.scaffold00117 435053 1 . A scaffold2551 Both SNP 0030.scaffold00117 435324 1 G C scaffold2551 ReadM SNP 0030.scaffold00117 435449 1 C T - ReadM SNP 0030.scaffold00117 435452 1 C T - ReadM SNP 0030.scaffold00117 435479 1 C A - ReadM SNP 0030.scaffold00117 435580 1 A T - ReadM SNP 0030.scaffold00117 435594 1 G A - ReadM SNP 0030.scaffold00117 435602 1 G A - Both SNP 0030.scaffold00117 435768 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 435998 2 TA CG scaffold2551 ReadM SNP 0030.scaffold00117 436183 1 A G - ReadM INDEL 0030.scaffold00117 436197 1 G . - ReadM SNP 0030.scaffold00117 436209 1 G A - ReadM SNP 0030.scaffold00117 436264 1 C T - ReadM SNP 0030.scaffold00117 436333 1 T C - ScafM INDEL 0030.scaffold00117 436402 21 GTGCTTTTTCTCTGAATAATG ..................... scaffold2551 ScafM SNP 0030.scaffold00117 436456 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 436472 1 C A scaffold2551 Both SNP 0030.scaffold00117 436504 1 A G scaffold2551 Both SNP 0030.scaffold00117 436507 1 A G scaffold2551 Both SNP 0030.scaffold00117 436526 1 G C scaffold2551 Both SNP 0030.scaffold00117 436714 1 C T scaffold2551 ReadM INDEL 0030.scaffold00117 436803 1 . G - ReadM SNP 0030.scaffold00117 436873 1 A G - ReadM SNP 0030.scaffold00117 437052 1 G A - ReadM SNP 0030.scaffold00117 437234 1 A G - ReadM SNP 0030.scaffold00117 437307 1 C A - ReadM SNP 0030.scaffold00117 437329 1 A G - ReadM SNP 0030.scaffold00117 437813 1 T G - ReadM SNP 0030.scaffold00117 437860 1 C T - ReadM SNP 0030.scaffold00117 437903 1 C T - ReadM SNP 0030.scaffold00117 438019 1 T G - ReadM SNP 0030.scaffold00117 438114 1 A C - ReadM SNP 0030.scaffold00117 438400 1 C G - ReadM SNP 0030.scaffold00117 438437 1 A G - ReadM SNP 0030.scaffold00117 438465 1 A G - ReadM SNP 0030.scaffold00117 438493 1 A C - ReadM SNP 0030.scaffold00117 438502 1 C A - ReadM SNP 0030.scaffold00117 440387 1 T G - ReadM SNP 0030.scaffold00117 440540 1 C T - ReadM SNP 0030.scaffold00117 440543 1 C T - ReadM SNP 0030.scaffold00117 440682 1 G T - ReadM SNP 0030.scaffold00117 442737 1 C T - ReadM SNP 0030.scaffold00117 443005 1 G A - ReadM SNP 0030.scaffold00117 443013 1 G C - ReadM SNP 0030.scaffold00117 443124 1 A C - ReadM SNP 0030.scaffold00117 443222 1 C T - ReadM SNP 0030.scaffold00117 443478 1 C T - ReadM SNP 0030.scaffold00117 443735 1 T G - ReadM SNP 0030.scaffold00117 443828 1 G T - ReadM SNP 0030.scaffold00117 443938 1 C A - ReadM SNP 0030.scaffold00117 444321 1 T C - ReadM INDEL 0030.scaffold00117 444519 1 . C - ReadM SNP 0030.scaffold00117 444608 1 G A - ReadM SNP 0030.scaffold00117 444644 1 T A - ReadM SNP 0030.scaffold00117 445240 1 A G - ReadM SNP 0030.scaffold00117 445263 1 A G - ReadM SNP 0030.scaffold00117 445498 1 G A - ReadM SNP 0030.scaffold00117 445575 1 A G - ReadM SNP 0030.scaffold00117 445803 1 T A - ReadM SNP 0030.scaffold00117 445823 1 T C - ReadM SNP 0030.scaffold00117 445961 1 C T - ReadM SNP 0030.scaffold00117 445984 1 C T - ReadM SNP 0030.scaffold00117 446156 1 C T - ReadM SNP 0030.scaffold00117 446158 1 G A - ReadM SNP 0030.scaffold00117 448041 1 T G - ReadM SNP 0030.scaffold00117 448161 1 G A - ReadM INDEL 0030.scaffold00117 448564 2 .. AA - ReadM SNP 0030.scaffold00117 448608 1 G A - ReadM SNP 0030.scaffold00117 448653 2 CT AG - ReadM SNP 0030.scaffold00117 448753 1 T C - ReadM SNP 0030.scaffold00117 448980 1 A G - ReadM INDEL 0030.scaffold00117 449017 1 G . - ReadM SNP 0030.scaffold00117 449114 1 T G - ReadM SNP 0030.scaffold00117 449520 1 C T - ReadM SNP 0030.scaffold00117 450460 1 T G - ReadM SNP 0030.scaffold00117 450604 1 A G - ReadM SNP 0030.scaffold00117 450964 1 T C - ReadM SNP 0030.scaffold00117 451550 1 T C - ReadM INDEL 0030.scaffold00117 452099 1 T . - ReadM SNP 0030.scaffold00117 452219 1 C A - ReadM SNP 0030.scaffold00117 452654 1 T G - ReadM SNP 0030.scaffold00117 452800 1 T C - ReadM SNP 0030.scaffold00117 452904 1 A C - ReadM SNP 0030.scaffold00117 453006 1 T C - ReadM SNP 0030.scaffold00117 453203 1 C A - ReadM SNP 0030.scaffold00117 453297 1 A T - ReadM SNP 0030.scaffold00117 453503 1 T C - ReadM SNP 0030.scaffold00117 453517 1 C G - ReadM SNP 0030.scaffold00117 453658 1 G A - ReadM SNP 0030.scaffold00117 453758 1 G C - ReadM SNP 0030.scaffold00117 453769 1 G A - ReadM SNP 0030.scaffold00117 453916 1 G A - ReadM SNP 0030.scaffold00117 453954 1 A G - ReadM SNP 0030.scaffold00117 453965 1 A G - ReadM SNP 0030.scaffold00117 454205 1 G T - ReadM SNP 0030.scaffold00117 454450 1 G A - ReadM SNP 0030.scaffold00117 454638 1 G A - ReadM SNP 0030.scaffold00117 454659 1 C G - ReadM SNP 0030.scaffold00117 454678 1 A C - ReadM SNP 0030.scaffold00117 454772 1 G A - ReadM SNP 0030.scaffold00117 454882 1 C A - ReadM SNP 0030.scaffold00117 455320 1 T C - ReadM SNP 0030.scaffold00117 455844 1 A T - ReadM SNP 0030.scaffold00117 455858 1 T C - ReadM SNP 0030.scaffold00117 455867 1 T A - ReadM SNP 0030.scaffold00117 456189 1 A C - ReadM SNP 0030.scaffold00117 456285 1 A C - ReadM SNP 0030.scaffold00117 456319 1 A T - ReadM SNP 0030.scaffold00117 456450 1 A C - ReadM SNP 0030.scaffold00117 456624 1 G A - ReadM SNP 0030.scaffold00117 457167 1 T C - ReadM SNP 0030.scaffold00117 457221 1 T C - ReadM SNP 0030.scaffold00117 457253 1 A G - ReadM SNP 0030.scaffold00117 457490 1 A C - ScafM SNP 0030.scaffold00117 457675 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 457783 1 T C scaffold2551 Both SNP 0030.scaffold00117 457819 1 A C scaffold2551 Both SNP 0030.scaffold00117 457825 1 C T scaffold2551 Both SNP 0030.scaffold00117 457896 1 G A scaffold2551 Both SNP 0030.scaffold00117 457928 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 458023 1 G A scaffold2551 Both SNP 0030.scaffold00117 458059 1 A T scaffold2551 Both SNP 0030.scaffold00117 458193 1 C A scaffold2551 ScafM INDEL 0030.scaffold00117 458215 6 ...... ACATTC scaffold2551 Both SNP 0030.scaffold00117 458248 1 G A scaffold2551 Both SNP 0030.scaffold00117 458270 1 A G scaffold2551 Both SNP 0030.scaffold00117 458375 1 A G scaffold2551 Both SNP 0030.scaffold00117 458386 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 458532 1 T G scaffold2551 Both SNP 0030.scaffold00117 458633 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 458833 2 CC AA scaffold2551 Both SNP 0030.scaffold00117 459009 1 A T scaffold2551 Both SNP 0030.scaffold00117 459084 1 G A scaffold2551 Both SNP 0030.scaffold00117 459152 1 A C scaffold2551 Both SNP 0030.scaffold00117 459806 1 G A scaffold2551 Both SNP 0030.scaffold00117 459870 1 G A scaffold2551 Both SNP 0030.scaffold00117 459908 1 T A scaffold2551 Both SNP 0030.scaffold00117 459934 1 T C scaffold2551 Both INDEL 0030.scaffold00117 460073 1 . A scaffold2551 Both INDEL 0030.scaffold00117 460117 1 A . scaffold2551 Both SNP 0030.scaffold00117 460147 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 460512 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 460624 2 TT .. scaffold2551 ScafM INDEL 0030.scaffold00117 460667 1 . A scaffold2551 ScafM INDEL 0030.scaffold00117 460742 8 ........ TTTATTAT scaffold2551 ScafM SNP 0030.scaffold00117 460780 1 A G scaffold2551 ScafM INDEL 0030.scaffold00117 460811 6 TTTATC ...... scaffold2551 ScafM SNP 0030.scaffold00117 460840 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 460846 1 A T scaffold2551 ReadM SNP 0030.scaffold00117 461819 1 T C - ScafM SNP 0030.scaffold00117 462127 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 462522 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 462550 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 462671 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 462728 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 462745 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 462749 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 462812 1 G C scaffold2551 ReadM SNP 0030.scaffold00117 463061 1 C T - Both SNP 0030.scaffold00117 463496 1 T C scaffold2551 Both SNP 0030.scaffold00117 463572 1 T A scaffold2551 Both SNP 0030.scaffold00117 463677 1 G T scaffold2551 Both SNP 0030.scaffold00117 463768 1 A G scaffold2551 Both SNP 0030.scaffold00117 463851 1 T C scaffold2551 ReadM SNP 0030.scaffold00117 464060 1 T G - Both SNP 0030.scaffold00117 464111 1 T C scaffold2551 ReadM SNP 0030.scaffold00117 464337 1 A G - ReadM SNP 0030.scaffold00117 464606 1 T C - ReadM SNP 0030.scaffold00117 464773 1 T A - ReadM SNP 0030.scaffold00117 464827 1 A G - ReadM INDEL 0030.scaffold00117 464849 1 C . - ReadM SNP 0030.scaffold00117 464900 1 T C - ReadM SNP 0030.scaffold00117 465080 1 T A - ReadM SNP 0030.scaffold00117 465277 1 C T - ScafM SNP 0030.scaffold00117 465754 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 465764 1 T A scaffold2551 ScafM SNP 0030.scaffold00117 465779 1 G A scaffold2551 ScafM INDEL 0030.scaffold00117 466068 10 .......... TACAATAAGT scaffold2551 ScafM SNP 0030.scaffold00117 466143 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 466316 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 466499 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 466547 3 ... AAA scaffold2551 ScafM SNP 0030.scaffold00117 466728 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 466769 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 466868 1 G A scaffold2551 ReadM SNP 0030.scaffold00117 467647 1 T A - ReadM SNP 0030.scaffold00117 467748 1 C G - ReadM SNP 0030.scaffold00117 467878 1 G C - ReadM SNP 0030.scaffold00117 467894 1 C G - ReadM SNP 0030.scaffold00117 467905 1 A G - ReadM SNP 0030.scaffold00117 468040 1 G C - ScafM SNP 0030.scaffold00117 468995 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 468999 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 469001 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 469004 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 469017 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 469023 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 469027 2 AT GC scaffold2551 ScafM INDEL 0030.scaffold00117 469055 6 TCTGAA ...... scaffold2551 ScafM INDEL 0030.scaffold00117 469062 3 TTG ... scaffold2551 ScafM SNP 0030.scaffold00117 469085 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 469122 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 469171 1 C A scaffold2551 ScafM SNP 0030.scaffold00117 469178 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 469206 1 T C scaffold2551 ScafM INDEL 0030.scaffold00117 469231 1 T . scaffold2551 ScafM SNP 0030.scaffold00117 469234 1 C A scaffold2551 ScafM SNP 0030.scaffold00117 470238 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 470250 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 470347 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 470641 1 C G scaffold2551 ScafM SNP 0030.scaffold00117 470658 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 470684 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 470711 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 470753 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 470766 1 A T scaffold2551 ReadM SNP 0030.scaffold00117 471318 1 A C - ReadM SNP 0030.scaffold00117 471395 1 G A - ScafM SNP 0030.scaffold00117 471588 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 471672 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 471680 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 471726 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 471728 1 C A scaffold2551 ScafM SNP 0030.scaffold00117 471738 1 C G scaffold2551 ScafM INDEL 0030.scaffold00117 471763 2 .. AC scaffold2551 ScafM SNP 0030.scaffold00117 471801 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 471851 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 471856 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 471882 1 C T scaffold2551 ScafM INDEL 0030.scaffold00117 471885 1 . A scaffold2551 ScafM SNP 0030.scaffold00117 471917 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 471923 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 471927 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 471954 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 471999 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 472525 1 A T scaffold7841 ScafM SNP 0030.scaffold00117 472529 2 CC TT scaffold7841 ScafM SNP 0030.scaffold00117 472532 1 C A scaffold7841 ScafM SNP 0030.scaffold00117 472534 1 G C scaffold7841 ScafM SNP 0030.scaffold00117 472550 2 GG AA scaffold7841 ScafM SNP 0030.scaffold00117 472559 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 472565 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 472573 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 472576 1 T C scaffold7841 ScafM SNP 0030.scaffold00117 472595 1 C T scaffold7841 ScafM INDEL 0030.scaffold00117 472606 10 .......... CCTCAAACTC scaffold7841 ScafM SNP 0030.scaffold00117 472659 1 C T scaffold7841 ScafM SNP 0030.scaffold00117 472686 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 472698 1 A C scaffold7841 ScafM INDEL 0030.scaffold00117 472702 4 TAAG .... scaffold7841 ScafM SNP 0030.scaffold00117 472707 1 A C scaffold7841 ScafM SNP 0030.scaffold00117 472719 1 C T scaffold7841 ScafM SNP 0030.scaffold00117 472721 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 472724 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 472728 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 472732 1 A T scaffold7841 ScafM SNP 0030.scaffold00117 472746 1 C T scaffold7841 ScafM INDEL 0030.scaffold00117 472766 1 T . scaffold7841 ScafM SNP 0030.scaffold00117 472784 1 T C scaffold7841 ScafM SNP 0030.scaffold00117 472792 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 472795 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 472825 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 472847 1 T C scaffold7841 ScafM SNP 0030.scaffold00117 472867 1 A T scaffold7841 ScafM SNP 0030.scaffold00117 472876 1 A T scaffold7841 ScafM INDEL 0030.scaffold00117 472891 6 ...... TGAGAG scaffold7841 ScafM SNP 0030.scaffold00117 472918 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 472959 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 472971 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 473013 3 GTG TCA scaffold7841 ScafM SNP 0030.scaffold00117 473029 1 A T scaffold7841 ScafM SNP 0030.scaffold00117 473034 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473044 1 G T scaffold7841 ScafM SNP 0030.scaffold00117 473084 1 T A scaffold7841 ScafM INDEL 0030.scaffold00117 473104 2 TG .C scaffold7841 ScafM SNP 0030.scaffold00117 473107 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473132 1 C G scaffold7841 ScafM INDEL 0030.scaffold00117 473147 1 G . scaffold7841 ScafM SNP 0030.scaffold00117 473153 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 473156 2 CA TG scaffold7841 ScafM SNP 0030.scaffold00117 473173 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473178 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473184 2 AG GA scaffold7841 ScafM INDEL 0030.scaffold00117 473189 2 AT .. scaffold7841 ScafM SNP 0030.scaffold00117 473195 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 473208 1 C G scaffold7841 ScafM SNP 0030.scaffold00117 473217 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473219 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 473233 1 G A scaffold7841 ScafM INDEL 0030.scaffold00117 473237 2 CA .. scaffold7841 ScafM INDEL 0030.scaffold00117 473240 2 GA .. scaffold7841 ScafM SNP 0030.scaffold00117 473243 1 A G scaffold7841 ScafM SNP 0030.scaffold00117 473247 1 G C scaffold7841 ScafM SNP 0030.scaffold00117 473249 1 G C scaffold7841 ScafM INDEL 0030.scaffold00117 473251 12 TGGTGGAATCTT ............ scaffold7841 ScafM INDEL 0030.scaffold00117 473265 3 AGC ... scaffold7841 ScafM SNP 0030.scaffold00117 473276 1 T G scaffold7841 ScafM SNP 0030.scaffold00117 473287 1 T A scaffold7841 ScafM SNP 0030.scaffold00117 473290 1 G A scaffold7841 ScafM SNP 0030.scaffold00117 473293 1 T C scaffold7841 ScafM SNP 0030.scaffold00117 473300 1 T C scaffold7841 ScafM SNP 0030.scaffold00117 473315 1 C G scaffold7841 ScafM INDEL 0030.scaffold00117 473326 1 A . scaffold7841 ScafM SNP 0030.scaffold00117 473338 1 C T scaffold7841 ScafM SNP 0030.scaffold00117 473340 1 T G scaffold7841 ScafM SNP 0030.scaffold00117 474201 1 C A scaffold10756 ScafM SNP 0030.scaffold00117 474208 1 G A scaffold10756 ScafM INDEL 0030.scaffold00117 474220 1 A . scaffold10756 ScafM SNP 0030.scaffold00117 480284 1 G C scaffold8973 ScafM SNP 0030.scaffold00117 480326 1 T A scaffold8973 ScafM SNP 0030.scaffold00117 483001 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483020 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483087 1 T A scaffold7225 ScafM SNP 0030.scaffold00117 483092 1 C A scaffold7225 ScafM SNP 0030.scaffold00117 483109 1 A G scaffold7225 ScafM SNP 0030.scaffold00117 483112 1 C T scaffold7225 ScafM INDEL 0030.scaffold00117 483119 1 T . scaffold7225 ScafM SNP 0030.scaffold00117 483146 1 C G scaffold7225 ScafM SNP 0030.scaffold00117 483153 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483179 1 G A scaffold7225 ScafM SNP 0030.scaffold00117 483198 1 A G scaffold7225 ScafM SNP 0030.scaffold00117 483212 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483238 2 CG AT scaffold7225 ScafM SNP 0030.scaffold00117 483247 1 T A scaffold7225 ScafM SNP 0030.scaffold00117 483257 1 T C scaffold7225 ScafM SNP 0030.scaffold00117 483297 1 G A scaffold7225 ScafM SNP 0030.scaffold00117 483347 1 T C scaffold7225 ScafM SNP 0030.scaffold00117 483361 1 G T scaffold7225 ScafM SNP 0030.scaffold00117 483372 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483394 1 A G scaffold7225 ScafM SNP 0030.scaffold00117 483429 1 C T scaffold7225 ScafM SNP 0030.scaffold00117 483455 1 A G scaffold7225 ScafM SNP 0030.scaffold00117 483457 1 C A scaffold7225 ScafM SNP 0030.scaffold00117 483463 1 G C scaffold7225 ScafM INDEL 0030.scaffold00117 483963 1 A . scaffold6609 ScafM SNP 0030.scaffold00117 483986 1 A G scaffold6609 ScafM SNP 0030.scaffold00117 488422 1 C T scaffold5623 ScafM INDEL 0030.scaffold00117 488432 1 . G scaffold5623 ScafM SNP 0030.scaffold00117 488436 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 488453 1 G A scaffold5623 ScafM INDEL 0030.scaffold00117 488456 1 A . scaffold5623 ScafM SNP 0030.scaffold00117 488475 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 488489 1 A T scaffold5623 ScafM SNP 0030.scaffold00117 488503 1 T C scaffold5623 ScafM INDEL 0030.scaffold00117 488514 1 . G scaffold5623 ScafM SNP 0030.scaffold00117 488525 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 488569 1 C A scaffold5623 ScafM INDEL 0030.scaffold00117 488577 1 G . scaffold5623 ScafM INDEL 0030.scaffold00117 488579 1 T . scaffold5623 ScafM SNP 0030.scaffold00117 488586 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 488598 2 TG CA scaffold5623 ScafM SNP 0030.scaffold00117 488603 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 488610 1 G C scaffold5623 ScafM SNP 0030.scaffold00117 488618 1 A G scaffold5623 ScafM INDEL 0030.scaffold00117 488626 2 AA .. scaffold5623 ScafM INDEL 0030.scaffold00117 488644 3 ... ACC scaffold5623 ScafM SNP 0030.scaffold00117 488647 1 T A scaffold5623 ScafM SNP 0030.scaffold00117 488663 2 GT AG scaffold5623 ScafM SNP 0030.scaffold00117 488685 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 488728 1 C T scaffold5623 ScafM INDEL 0030.scaffold00117 488758 11 ........... TAAAACTCTTT scaffold5623 ScafM INDEL 0030.scaffold00117 488763 11 ........... CTTTGTTTTCT scaffold5623 ScafM SNP 0030.scaffold00117 488766 1 C G scaffold5623 ScafM INDEL 0030.scaffold00117 488768 4 .... ATGG scaffold5623 ScafM INDEL 0030.scaffold00117 488770 1 . A scaffold5623 ScafM SNP 0030.scaffold00117 488779 1 G C scaffold5623 ScafM SNP 0030.scaffold00117 488789 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 488804 4 TTTC AGAT scaffold5623 ScafM SNP 0030.scaffold00117 488812 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 488820 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 488836 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 488873 1 A T scaffold5623 ScafM SNP 0030.scaffold00117 488900 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 488910 1 T A scaffold5623 ScafM SNP 0030.scaffold00117 488915 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 488934 1 A T scaffold5623 ScafM SNP 0030.scaffold00117 488938 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 488941 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 488948 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 488965 1 T G scaffold5623 ScafM SNP 0030.scaffold00117 488980 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 488983 1 T A scaffold5623 ScafM INDEL 0030.scaffold00117 489006 3 TAA ..G scaffold5623 ScafM SNP 0030.scaffold00117 489017 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489030 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489040 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489067 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489069 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489072 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489102 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 489105 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 489119 1 G C scaffold5623 ScafM SNP 0030.scaffold00117 489125 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489136 1 T A scaffold5623 ScafM SNP 0030.scaffold00117 489169 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489184 1 A C scaffold5623 ScafM SNP 0030.scaffold00117 489188 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489214 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489236 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 489255 1 C G scaffold5623 ScafM SNP 0030.scaffold00117 489297 1 A C scaffold5623 ScafM SNP 0030.scaffold00117 489315 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489319 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 489325 2 GA AC scaffold5623 ScafM SNP 0030.scaffold00117 489372 1 T G scaffold5623 ScafM SNP 0030.scaffold00117 489402 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489434 1 A T scaffold5623 ScafM SNP 0030.scaffold00117 489447 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489449 1 G T scaffold5623 ScafM SNP 0030.scaffold00117 489462 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489469 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 489490 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489498 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489502 1 C A scaffold5623 ScafM SNP 0030.scaffold00117 489530 1 A C scaffold5623 ScafM SNP 0030.scaffold00117 489542 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489575 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489583 2 GT AA scaffold5623 ScafM SNP 0030.scaffold00117 489592 1 A T scaffold5623 ScafM SNP 0030.scaffold00117 489602 1 T G scaffold5623 ScafM SNP 0030.scaffold00117 489659 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 489661 1 G A scaffold5623 ScafM INDEL 0030.scaffold00117 489669 4 GTAG .... scaffold5623 ScafM INDEL 0030.scaffold00117 489675 7 TCAACAA ....... scaffold5623 ScafM SNP 0030.scaffold00117 489689 1 G A scaffold5623 ScafM SNP 0030.scaffold00117 489702 1 G C scaffold5623 ScafM SNP 0030.scaffold00117 489711 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489726 1 C G scaffold5623 ScafM INDEL 0030.scaffold00117 489735 30 .............................. TTGCTAAAACTCATGACGACAGTTCAACAC scaffold5623 ScafM SNP 0030.scaffold00117 489777 1 A C scaffold5623 ScafM SNP 0030.scaffold00117 489786 1 T G scaffold5623 ScafM SNP 0030.scaffold00117 489807 1 C T scaffold5623 ScafM INDEL 0030.scaffold00117 489832 3 ATT ... scaffold5623 ScafM SNP 0030.scaffold00117 489858 1 C A scaffold5623 ScafM SNP 0030.scaffold00117 489879 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489894 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489912 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489930 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489937 1 T A scaffold5623 ScafM SNP 0030.scaffold00117 489944 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489950 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489953 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489957 1 C T scaffold5623 ScafM SNP 0030.scaffold00117 489961 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489967 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 489975 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 489997 1 T C scaffold5623 ScafM SNP 0030.scaffold00117 490013 1 T G scaffold5623 ScafM SNP 0030.scaffold00117 490019 2 TA CG scaffold5623 ScafM SNP 0030.scaffold00117 490027 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 490030 1 A G scaffold5623 ScafM SNP 0030.scaffold00117 491128 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491144 1 A C scaffold6582 ScafM INDEL 0030.scaffold00117 491152 2 AG .. scaffold6582 ScafM INDEL 0030.scaffold00117 491156 4 GCCA .... scaffold6582 ScafM INDEL 0030.scaffold00117 491161 1 G . scaffold6582 ScafM INDEL 0030.scaffold00117 491163 1 C . scaffold6582 ScafM SNP 0030.scaffold00117 491167 1 T A scaffold6582 ScafM SNP 0030.scaffold00117 491180 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491198 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491249 1 A G scaffold6582 ScafM INDEL 0030.scaffold00117 491268 32 CTTAAATGGCCATATCGCCGGAATTCTCTCTA ................................ scaffold6582 ScafM INDEL 0030.scaffold00117 491303 3 CAT ... scaffold6582 ScafM SNP 0030.scaffold00117 491319 1 G C scaffold6582 ScafM SNP 0030.scaffold00117 491324 2 TA CG scaffold6582 ScafM INDEL 0030.scaffold00117 491376 1 G . scaffold6582 ScafM SNP 0030.scaffold00117 491378 1 T C scaffold6582 ScafM INDEL 0030.scaffold00117 491395 3 GGT .AA scaffold6582 ScafM SNP 0030.scaffold00117 491404 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491407 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491410 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491412 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491414 3 CGA TTC scaffold6582 ScafM SNP 0030.scaffold00117 491420 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491422 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491431 1 T A scaffold6582 ScafM SNP 0030.scaffold00117 491485 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491496 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491510 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491515 1 A T scaffold6582 ScafM SNP 0030.scaffold00117 491529 1 T G scaffold6582 ScafM SNP 0030.scaffold00117 491532 1 C G scaffold6582 ScafM SNP 0030.scaffold00117 491534 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491536 2 CA TG scaffold6582 ScafM SNP 0030.scaffold00117 491540 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491553 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491556 2 GG CA scaffold6582 ScafM SNP 0030.scaffold00117 491560 1 T A scaffold6582 ScafM SNP 0030.scaffold00117 491579 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491582 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491598 1 G T scaffold6582 ScafM SNP 0030.scaffold00117 491603 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491611 1 C A scaffold6582 ScafM INDEL 0030.scaffold00117 491631 2 .. GT scaffold6582 ScafM SNP 0030.scaffold00117 491637 1 A G scaffold6582 ScafM INDEL 0030.scaffold00117 491642 6 ...... ATGAAG scaffold6582 ScafM SNP 0030.scaffold00117 491652 2 TT GC scaffold6582 ScafM SNP 0030.scaffold00117 491658 1 A T scaffold6582 ScafM SNP 0030.scaffold00117 491661 1 C A scaffold6582 ScafM SNP 0030.scaffold00117 491666 1 C T scaffold6582 ScafM SNP 0030.scaffold00117 491668 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491683 1 A C scaffold6582 ScafM SNP 0030.scaffold00117 491688 1 G A scaffold6582 ScafM SNP 0030.scaffold00117 491690 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491694 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491698 2 CG AA scaffold6582 ScafM SNP 0030.scaffold00117 491702 2 GC AA scaffold6582 ScafM INDEL 0030.scaffold00117 491709 2 .. AG scaffold6582 ScafM SNP 0030.scaffold00117 491718 1 G T scaffold6582 ScafM SNP 0030.scaffold00117 491724 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491726 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491732 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491764 1 A C scaffold6582 ScafM SNP 0030.scaffold00117 491768 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491783 1 T C scaffold6582 ScafM SNP 0030.scaffold00117 491788 1 A C scaffold6582 ScafM SNP 0030.scaffold00117 491799 1 C A scaffold6582 ScafM SNP 0030.scaffold00117 491801 1 A G scaffold6582 ScafM SNP 0030.scaffold00117 491816 2 CG TA scaffold6582 ScafM SNP 0030.scaffold00117 506044 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 506049 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506069 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 506074 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506084 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506104 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506114 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 506143 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 506145 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 506147 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 506153 2 CA GG scaffold1399 ScafM SNP 0030.scaffold00117 506156 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 506158 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506162 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 506164 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 506168 1 C T scaffold1399 ScafM INDEL 0030.scaffold00117 506173 1 . C scaffold1399 ScafM INDEL 0030.scaffold00117 506174 1 . C scaffold1399 ScafM INDEL 0030.scaffold00117 506175 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 506181 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506184 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 506190 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 506216 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506290 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 506297 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506361 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 506378 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506387 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506392 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 506411 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506441 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 506446 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 506449 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 506455 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 506462 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 506491 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 506496 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506501 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506503 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 506528 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 506540 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506546 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506557 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 506575 1 G A scaffold1399 ScafM INDEL 0030.scaffold00117 506629 5 ..... GGATG scaffold1399 ScafM SNP 0030.scaffold00117 506646 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506648 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 506650 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 506659 1 T G scaffold1399 ScafM INDEL 0030.scaffold00117 506661 2 .T CC scaffold1399 ScafM SNP 0030.scaffold00117 506664 2 CG TA scaffold1399 ScafM INDEL 0030.scaffold00117 506674 1 . G scaffold1399 ScafM SNP 0030.scaffold00117 506676 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 506678 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 506690 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506694 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 506700 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 509212 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 509217 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 510190 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 510944 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 510956 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 510967 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 510978 2 AC TA scaffold2437 ScafM SNP 0030.scaffold00117 510987 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 511001 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 511015 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 511022 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 511033 4 .... ATAT scaffold2437 ScafM INDEL 0030.scaffold00117 511047 3 TAT ... scaffold2437 ScafM SNP 0030.scaffold00117 511061 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 511101 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 511126 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 520065 1 A T scaffold1281 ScafM SNP 0030.scaffold00117 520067 1 C A scaffold1281 ScafM SNP 0030.scaffold00117 520116 1 C T scaffold1281 ScafM INDEL 0030.scaffold00117 520125 1 . C scaffold1281 ScafM SNP 0030.scaffold00117 520199 1 A G scaffold1281 ScafM SNP 0030.scaffold00117 520208 1 A G scaffold1281 ScafM SNP 0030.scaffold00117 520226 1 A G scaffold1281 ScafM SNP 0030.scaffold00117 520249 1 T G scaffold1281 ReadM SNP 0030.scaffold00117 523117 1 C T - ReadM SNP 0030.scaffold00117 523157 1 T C - ReadM SNP 0030.scaffold00117 523202 1 T A - ReadM SNP 0030.scaffold00117 523214 1 T C - ReadM SNP 0030.scaffold00117 523223 1 C T - ScafM INDEL 0030.scaffold00117 524584 1 . T scaffold6167 ScafM INDEL 0030.scaffold00117 524598 18 CACAAAACGAGCGTCTGC .................. scaffold6167 ScafM SNP 0030.scaffold00117 524658 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 524673 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 524685 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 524693 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 524696 4 .... AATT scaffold6167 ScafM SNP 0030.scaffold00117 524712 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 524813 1 A T scaffold6167 ScafM INDEL 0030.scaffold00117 524838 2 .. AT scaffold6167 ScafM SNP 0030.scaffold00117 524868 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 524871 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 524890 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 525046 1 C A scaffold6167 ScafM INDEL 0030.scaffold00117 525056 5 GAAAG ..... scaffold6167 ScafM INDEL 0030.scaffold00117 525063 1 A . scaffold6167 ScafM SNP 0030.scaffold00117 525080 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 525085 1 C A scaffold6167 ScafM INDEL 0030.scaffold00117 525108 4 GCGT .... scaffold6167 ScafM SNP 0030.scaffold00117 525117 2 AT GG scaffold6167 ScafM INDEL 0030.scaffold00117 525134 1 . G scaffold6167 Both SNP 0030.scaffold00117 525207 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 525239 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525243 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 525367 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 525377 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 525388 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 525414 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525424 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 525445 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 525483 1 . G scaffold6167 ScafM SNP 0030.scaffold00117 525490 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 525501 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 525522 1 G T scaffold6167 ScafM INDEL 0030.scaffold00117 525539 7 CTCTTTC ....... scaffold6167 ScafM SNP 0030.scaffold00117 525548 1 C G scaffold6167 ScafM INDEL 0030.scaffold00117 525552 2 TC .. scaffold6167 ScafM SNP 0030.scaffold00117 525580 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 525595 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 525602 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525614 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 525626 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 525628 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 525631 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525644 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525653 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 525655 1 G C scaffold6167 Both SNP 0030.scaffold00117 525689 1 A G scaffold6167 Both SNP 0030.scaffold00117 525759 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 525802 2 .. CT scaffold6167 ScafM INDEL 0030.scaffold00117 525803 1 . A scaffold6167 ScafM SNP 0030.scaffold00117 525813 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 525906 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 525928 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 525933 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 526052 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 526079 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 526102 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 526125 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 526132 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 526134 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 526139 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 526155 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 526166 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 526215 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 526218 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 526230 1 G C scaffold6167 ScafM INDEL 0030.scaffold00117 526236 1 . T scaffold6167 ScafM SNP 0030.scaffold00117 526256 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 526270 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 526308 2 AT GC scaffold6167 ScafM SNP 0030.scaffold00117 526313 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 526370 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 526382 2 TT GG scaffold6167 ScafM INDEL 0030.scaffold00117 526390 3 AGT ... scaffold6167 ScafM SNP 0030.scaffold00117 526402 2 AT CC scaffold6167 ScafM SNP 0030.scaffold00117 526439 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 526446 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 526463 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 526495 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 526901 2 AA .. scaffold6167 ScafM SNP 0030.scaffold00117 526978 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 527055 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 527063 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 527071 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 527107 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 527246 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 527257 2 AT GC scaffold6167 ScafM SNP 0030.scaffold00117 527274 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 527279 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 527295 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 527328 1 T A scaffold6167 ScafM INDEL 0030.scaffold00117 527338 1 T . scaffold6167 ScafM INDEL 0030.scaffold00117 527349 5 ....C TTATA scaffold6167 ScafM SNP 0030.scaffold00117 527646 1 A G scaffold6167 ScafM INDEL 0030.scaffold00117 527648 1 . A scaffold6167 ScafM SNP 0030.scaffold00117 527659 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 527665 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 527676 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 527681 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 527691 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 527698 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 527706 2 TC GA scaffold6167 ScafM SNP 0030.scaffold00117 527725 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 527727 2 GA CG scaffold6167 ScafM SNP 0030.scaffold00117 527732 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 527737 1 T A scaffold6167 ScafM INDEL 0030.scaffold00117 527742 1 A . scaffold6167 ScafM SNP 0030.scaffold00117 527768 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 527771 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 527796 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 527834 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 527837 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 527843 1 C A scaffold6167 ScafM INDEL 0030.scaffold00117 527845 1 . T scaffold6167 ScafM SNP 0030.scaffold00117 527850 2 AT CG scaffold6167 ScafM INDEL 0030.scaffold00117 527857 3 ..T AGA scaffold6167 ScafM INDEL 0030.scaffold00117 527866 2 .. GC scaffold6167 ScafM INDEL 0030.scaffold00117 527869 2 .. CT scaffold6167 ScafM SNP 0030.scaffold00117 527876 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 527949 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 527952 1 T A scaffold6167 ScafM INDEL 0030.scaffold00117 527958 6 ...... AAAATT scaffold6167 ScafM SNP 0030.scaffold00117 527984 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 527987 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 527993 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 528006 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 528011 1 G T scaffold6167 ScafM INDEL 0030.scaffold00117 528024 1 . T scaffold6167 ScafM SNP 0030.scaffold00117 528031 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 528043 1 A G scaffold6167 ScafM INDEL 0030.scaffold00117 528046 2 .G AA scaffold6167 ScafM SNP 0030.scaffold00117 538997 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 539033 1 A C scaffold6167 ScafM INDEL 0030.scaffold00117 541388 1 G . scaffold67330 ScafM INDEL 0030.scaffold00117 541390 1 A . scaffold67330 ScafM SNP 0030.scaffold00117 541393 1 T C scaffold67330 ScafM SNP 0030.scaffold00117 541401 1 G C scaffold67330 ScafM SNP 0030.scaffold00117 541404 2 AT TA scaffold67330 ScafM SNP 0030.scaffold00117 541407 1 G A scaffold67330 ScafM SNP 0030.scaffold00117 541411 1 C A scaffold67330 ScafM SNP 0030.scaffold00117 541434 1 A G scaffold67330 ScafM SNP 0030.scaffold00117 541438 2 GC AT scaffold67330 ScafM SNP 0030.scaffold00117 541443 2 TT AA scaffold67330 ScafM SNP 0030.scaffold00117 541458 1 T G scaffold67330 ScafM SNP 0030.scaffold00117 541673 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 541709 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 541715 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 541724 2 CG TA scaffold6167 ScafM SNP 0030.scaffold00117 541746 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 541761 2 AG GA scaffold6167 ScafM SNP 0030.scaffold00117 541774 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 541793 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 541796 2 AG GT scaffold6167 ScafM SNP 0030.scaffold00117 541821 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 541830 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 541835 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 541972 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 541983 2 GT .. scaffold6167 ScafM SNP 0030.scaffold00117 542000 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 542009 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 542033 4 ACGA .... scaffold6167 ScafM SNP 0030.scaffold00117 542044 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 542046 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 542076 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 542084 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 542088 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 542119 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 542322 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 542336 11 ........... ATTAGTAATAG scaffold6167 ScafM SNP 0030.scaffold00117 542360 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 542375 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 542385 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 542433 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 542491 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 542547 1 . A scaffold6167 ScafM SNP 0030.scaffold00117 542549 2 GT AC scaffold6167 ScafM SNP 0030.scaffold00117 542572 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 542594 1 T . scaffold6167 ScafM SNP 0030.scaffold00117 542616 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 542624 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 542641 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 545283 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 545293 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 545301 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 545304 1 A G scaffold1399 ScafM INDEL 0030.scaffold00117 545333 3 ATA ... scaffold1399 ScafM SNP 0030.scaffold00117 545351 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 545361 1 G C scaffold1399 ScafM INDEL 0030.scaffold00117 545367 3 TTG ... scaffold1399 ScafM SNP 0030.scaffold00117 545383 1 T C scaffold1399 ScafM INDEL 0030.scaffold00117 545392 9 CTAAAAAAA .......GG scaffold1399 ScafM SNP 0030.scaffold00117 545404 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 545409 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 545412 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 545415 2 CA TG scaffold1399 ScafM SNP 0030.scaffold00117 545418 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 545422 1 A C scaffold1399 ScafM INDEL 0030.scaffold00117 545429 5 ATTTG ..... scaffold1399 ScafM SNP 0030.scaffold00117 545440 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 545446 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 545450 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 545452 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 545492 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 545505 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 545507 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 545518 1 A C scaffold1399 ReadM SNP 0030.scaffold00117 546958 1 T A - ScafM SNP 0030.scaffold00117 547397 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 547420 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 547426 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 547430 1 A T scaffold6167 ScafM INDEL 0030.scaffold00117 547435 1 . T scaffold6167 ScafM SNP 0030.scaffold00117 547445 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 547446 6 ...... TTTTAA scaffold6167 ScafM SNP 0030.scaffold00117 547457 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 547469 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 547478 1 G . scaffold6167 ScafM INDEL 0030.scaffold00117 547501 3 AAT ... scaffold6167 ScafM SNP 0030.scaffold00117 547544 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 547546 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 547561 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 547582 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 547728 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 547739 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 547766 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 547783 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 547803 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 547806 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 547819 2 CA TT scaffold6167 ScafM SNP 0030.scaffold00117 547840 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 547851 1 . A scaffold6167 ScafM SNP 0030.scaffold00117 547866 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 547898 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 547900 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 548057 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 548076 1 A G scaffold1399 ScafM INDEL 0030.scaffold00117 548109 1 . A scaffold1399 ScafM SNP 0030.scaffold00117 548132 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548143 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548159 2 CG TT scaffold1399 ScafM SNP 0030.scaffold00117 548177 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548184 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548186 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 548196 2 AT TG scaffold1399 ScafM SNP 0030.scaffold00117 548213 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548217 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548223 2 GG AA scaffold1399 ScafM SNP 0030.scaffold00117 548228 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548230 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 548249 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 548255 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 548269 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 548290 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548308 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548321 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548329 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 548333 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 548351 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548358 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 548364 1 A G scaffold1399 ScafM INDEL 0030.scaffold00117 548381 1 C . scaffold1399 ScafM SNP 0030.scaffold00117 548386 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 548405 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548408 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548413 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 548421 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548425 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 548448 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548457 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 548473 1 T C scaffold1399 ScafM INDEL 0030.scaffold00117 548475 1 . T scaffold1399 ScafM INDEL 0030.scaffold00117 548476 2 .. TT scaffold1399 ScafM INDEL 0030.scaffold00117 548480 4 .... ATAT scaffold1399 ScafM SNP 0030.scaffold00117 548500 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 548503 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 548511 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 548518 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 548528 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548530 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 548540 1 C G scaffold1399 ScafM INDEL 0030.scaffold00117 548545 1 . C scaffold1399 ScafM SNP 0030.scaffold00117 548560 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 548563 1 C T scaffold1399 ScafM INDEL 0030.scaffold00117 548582 2 .. TA scaffold1399 ScafM INDEL 0030.scaffold00117 548584 2 .. AG scaffold1399 ScafM SNP 0030.scaffold00117 548596 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 548612 1 T C scaffold1399 ScafM INDEL 0030.scaffold00117 548614 3 ATT ... scaffold1399 ScafM SNP 0030.scaffold00117 548622 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548643 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548653 2 GC TG scaffold1399 ScafM INDEL 0030.scaffold00117 548664 9 ......... TAATTATTT scaffold1399 ScafM SNP 0030.scaffold00117 548723 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 548752 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548776 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 548786 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548789 2 CC TA scaffold1399 ScafM SNP 0030.scaffold00117 548802 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 548805 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 548818 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 548830 2 GA AG scaffold1399 ScafM SNP 0030.scaffold00117 548835 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548839 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 548842 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548878 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 548882 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 548884 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 549577 2 GT AA scaffold8989 ScafM SNP 0030.scaffold00117 550783 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 550786 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 550791 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 550793 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 550825 2 AC GA scaffold1399 ScafM SNP 0030.scaffold00117 550836 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 550843 3 CAT TGC scaffold1399 ScafM SNP 0030.scaffold00117 550894 1 G A scaffold1399 ScafM INDEL 0030.scaffold00117 550950 6 ...... GATCTT scaffold1399 ScafM SNP 0030.scaffold00117 550955 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 550981 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 550998 1 G A scaffold1399 ScafM INDEL 0030.scaffold00117 551001 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 551016 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 551021 1 A C scaffold1399 ScafM INDEL 0030.scaffold00117 551022 3 .CT TGC scaffold1399 ScafM INDEL 0030.scaffold00117 551028 2 .. TG scaffold1399 ScafM SNP 0030.scaffold00117 551029 3 CCT AGA scaffold1399 ScafM INDEL 0030.scaffold00117 551032 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 551035 1 G T scaffold1399 ScafM INDEL 0030.scaffold00117 551037 1 . A scaffold1399 ScafM SNP 0030.scaffold00117 551040 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 551057 2 CG TT scaffold1399 ScafM SNP 0030.scaffold00117 551070 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 551074 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 551127 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 551139 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 551143 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 551148 1 G A scaffold1399 ScafM INDEL 0030.scaffold00117 551152 4 .... AAAA scaffold1399 ScafM SNP 0030.scaffold00117 551158 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 551171 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 551175 2 GT AA scaffold1399 ScafM SNP 0030.scaffold00117 551178 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 551183 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 551185 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 551202 1 C G scaffold1399 ScafM SNP 0030.scaffold00117 551204 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 551215 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 551224 2 CG TA scaffold1399 ScafM SNP 0030.scaffold00117 551285 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 551301 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 551304 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 551313 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 551322 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 551327 1 T A scaffold1399 ScafM INDEL 0030.scaffold00117 551332 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 551337 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 551341 1 C A scaffold1399 ScafM INDEL 0030.scaffold00117 551346 1 G . scaffold1399 ScafM INDEL 0030.scaffold00117 551355 1 . T scaffold1399 ScafM INDEL 0030.scaffold00117 551356 1 . T scaffold1399 ScafM INDEL 0030.scaffold00117 551357 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 551381 2 AT CG scaffold1399 ScafM SNP 0030.scaffold00117 551416 1 A T scaffold1399 ScafM SNP 0030.scaffold00117 551419 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 551421 1 A T scaffold1399 ScafM INDEL 0030.scaffold00117 551442 2 TG .. scaffold1399 ScafM SNP 0030.scaffold00117 551477 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 551486 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 551504 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 551520 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 551550 2 CA TG scaffold1399 ScafM SNP 0030.scaffold00117 551566 1 T A scaffold1399 ScafM SNP 0030.scaffold00117 551568 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 552506 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 552537 3 ATT ... scaffold6167 ScafM SNP 0030.scaffold00117 552568 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 552571 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 552578 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 557805 1 A G scaffold2919 ScafM SNP 0030.scaffold00117 560279 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 560281 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 560294 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 560385 1 . A scaffold6167 ScafM INDEL 0030.scaffold00117 560389 1 G . scaffold6167 ScafM SNP 0030.scaffold00117 560399 2 AG TA scaffold6167 ScafM SNP 0030.scaffold00117 560785 2 AA TC scaffold6167 ScafM SNP 0030.scaffold00117 560790 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 560816 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 560825 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 560851 1 G T scaffold6167 ScafM INDEL 0030.scaffold00117 560856 12 AAGTAACTACTC ............ scaffold6167 ScafM SNP 0030.scaffold00117 560880 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 560882 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 560887 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 560900 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 560929 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 560938 4 .... TAAG scaffold6167 ScafM SNP 0030.scaffold00117 560940 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 560950 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 561018 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 564721 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 564729 2 TC AT scaffold1399 ScafM SNP 0030.scaffold00117 564755 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 564758 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 564764 1 G A scaffold1399 ScafM INDEL 0030.scaffold00117 564777 2 TC .. scaffold1399 ScafM INDEL 0030.scaffold00117 564783 2 AA .. scaffold1399 ScafM SNP 0030.scaffold00117 564786 1 T G scaffold1399 ScafM SNP 0030.scaffold00117 564796 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 564802 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 564812 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 564827 1 C A scaffold1399 ScafM INDEL 0030.scaffold00117 564835 1 . A scaffold1399 ScafM INDEL 0030.scaffold00117 564843 18 ACGATCAACAAATATTGA .................. scaffold1399 ScafM INDEL 0030.scaffold00117 564863 6 TTTTAG ...... scaffold1399 ScafM INDEL 0030.scaffold00117 564900 1 A . scaffold1399 ScafM SNP 0030.scaffold00117 564904 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 564907 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 564909 1 G C scaffold1399 ScafM SNP 0030.scaffold00117 564911 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 564931 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 564937 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 564950 2 AT CC scaffold1399 ScafM SNP 0030.scaffold00117 564958 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 564962 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 564997 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 565005 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 565007 1 T G scaffold1399 ScafM INDEL 0030.scaffold00117 565009 1 . T scaffold1399 ScafM SNP 0030.scaffold00117 565011 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 565015 2 TA CG scaffold1399 ScafM SNP 0030.scaffold00117 565031 1 A T scaffold1399 ScafM INDEL 0030.scaffold00117 565038 1 . C scaffold1399 ScafM SNP 0030.scaffold00117 565043 1 C A scaffold1399 ScafM SNP 0030.scaffold00117 565208 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 565212 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 565236 2 AA CT scaffold6167 ScafM SNP 0030.scaffold00117 565239 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 565248 2 GC .. scaffold6167 ScafM INDEL 0030.scaffold00117 565251 2 GG .. scaffold6167 ScafM SNP 0030.scaffold00117 565254 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 565260 1 G T scaffold6167 ScafM SNP 0030.scaffold00117 565264 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 565267 2 AC GT scaffold6167 ScafM SNP 0030.scaffold00117 565275 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 565283 1 A T scaffold6167 ScafM INDEL 0030.scaffold00117 565298 6 CTATTA ...... scaffold6167 ScafM SNP 0030.scaffold00117 565330 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 565338 2 CA TG scaffold6167 ScafM SNP 0030.scaffold00117 565347 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 565379 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 565381 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 565392 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 565400 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 565411 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 565418 4 .... ATAT scaffold6167 ScafM SNP 0030.scaffold00117 565432 1 C T scaffold6167 ScafM SNP 0030.scaffold00117 565451 1 C G scaffold6167 ScafM INDEL 0030.scaffold00117 565495 2 TC .. scaffold6167 ScafM SNP 0030.scaffold00117 565501 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 566975 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 566983 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 566995 1 G A scaffold1399 ScafM SNP 0030.scaffold00117 567013 1 C A scaffold1399 ScafM INDEL 0030.scaffold00117 567022 14 CCATAAAAAAAAAG .............. scaffold1399 ScafM SNP 0030.scaffold00117 567037 1 A C scaffold1399 ScafM SNP 0030.scaffold00117 567044 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 567046 1 T C scaffold1399 ScafM SNP 0030.scaffold00117 567068 1 A G scaffold1399 ScafM SNP 0030.scaffold00117 567077 1 C T scaffold1399 ScafM SNP 0030.scaffold00117 567117 1 G T scaffold1399 ScafM SNP 0030.scaffold00117 570605 1 C G scaffold5995 ScafM SNP 0030.scaffold00117 570706 1 A G scaffold5995 ScafM SNP 0030.scaffold00117 570893 1 T A scaffold5995 ScafM INDEL 0030.scaffold00117 570896 5 ..... CTTGT scaffold5995 ScafM SNP 0030.scaffold00117 570992 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 570997 1 C A scaffold5803 ScafM SNP 0030.scaffold00117 571005 2 GC TT scaffold5803 ScafM SNP 0030.scaffold00117 571020 1 C A scaffold5803 ScafM SNP 0030.scaffold00117 571040 1 G A scaffold5803 ScafM SNP 0030.scaffold00117 571057 2 CA TT scaffold5803 ScafM SNP 0030.scaffold00117 571060 1 A G scaffold5803 ScafM SNP 0030.scaffold00117 571069 2 CG AT scaffold5803 ScafM SNP 0030.scaffold00117 571092 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571094 1 T G scaffold5803 ScafM SNP 0030.scaffold00117 571103 2 AG GT scaffold5803 ScafM INDEL 0030.scaffold00117 571122 1 G . scaffold5803 ScafM SNP 0030.scaffold00117 571154 1 T G scaffold5803 ScafM SNP 0030.scaffold00117 571170 1 A C scaffold5803 ScafM INDEL 0030.scaffold00117 571173 5 TGGAG ..... scaffold5803 ScafM SNP 0030.scaffold00117 571181 1 T G scaffold5803 ScafM SNP 0030.scaffold00117 571203 1 G T scaffold5803 ScafM INDEL 0030.scaffold00117 571207 1 C . scaffold5803 ScafM SNP 0030.scaffold00117 571219 2 CT AC scaffold5803 ScafM INDEL 0030.scaffold00117 571255 5 ..... TCATC scaffold5803 ScafM SNP 0030.scaffold00117 571288 1 C A scaffold5803 ScafM SNP 0030.scaffold00117 571304 1 C G scaffold5803 ScafM SNP 0030.scaffold00117 571306 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571311 1 T C scaffold5803 ScafM INDEL 0030.scaffold00117 571314 3 ..C TAT scaffold5803 ScafM SNP 0030.scaffold00117 571334 1 A G scaffold5803 ScafM SNP 0030.scaffold00117 571339 1 A G scaffold5803 ScafM SNP 0030.scaffold00117 571359 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571361 1 G A scaffold5803 ScafM SNP 0030.scaffold00117 571369 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571372 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571379 1 T C scaffold5803 ScafM INDEL 0030.scaffold00117 571398 1 A . scaffold5803 ScafM INDEL 0030.scaffold00117 571413 2 .. TA scaffold5803 ScafM SNP 0030.scaffold00117 571417 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571422 2 CC TG scaffold5803 ScafM SNP 0030.scaffold00117 571451 1 A G scaffold5803 ScafM SNP 0030.scaffold00117 571454 1 C A scaffold5803 ScafM SNP 0030.scaffold00117 571479 1 C T scaffold5803 ScafM INDEL 0030.scaffold00117 571488 1 . T scaffold5803 ScafM SNP 0030.scaffold00117 571495 1 G C scaffold5803 ScafM SNP 0030.scaffold00117 571506 1 A T scaffold5803 ScafM SNP 0030.scaffold00117 571521 1 T C scaffold5803 ScafM SNP 0030.scaffold00117 571527 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571532 1 T C scaffold5803 ScafM SNP 0030.scaffold00117 571535 2 AC TG scaffold5803 ScafM SNP 0030.scaffold00117 571538 3 AGG GAC scaffold5803 ReadM SNP 0030.scaffold00117 571542 1 T C - ScafM SNP 0030.scaffold00117 571551 1 T C scaffold5803 ScafM SNP 0030.scaffold00117 571572 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571577 1 C T scaffold5803 ScafM SNP 0030.scaffold00117 571580 1 G T scaffold5803 ScafM INDEL 0030.scaffold00117 571608 1 . A scaffold5803 ScafM SNP 0030.scaffold00117 571610 1 C A scaffold5803 ScafM SNP 0030.scaffold00117 571619 1 T G scaffold5803 ScafM SNP 0030.scaffold00117 571643 1 A G scaffold5803 ScafM SNP 0030.scaffold00117 571981 1 G T scaffold35992 ScafM SNP 0030.scaffold00117 572044 1 T G scaffold35992 ScafM SNP 0030.scaffold00117 572070 1 A C scaffold35992 ScafM SNP 0030.scaffold00117 572094 1 A G scaffold35992 ScafM SNP 0030.scaffold00117 572144 1 T C scaffold35992 ScafM SNP 0030.scaffold00117 572151 1 C T scaffold35992 ScafM SNP 0030.scaffold00117 572167 1 T A scaffold35992 ScafM SNP 0030.scaffold00117 572171 1 T A scaffold35992 ScafM SNP 0030.scaffold00117 572184 1 G A scaffold35992 ScafM SNP 0030.scaffold00117 572319 1 T C scaffold35992 ScafM INDEL 0030.scaffold00117 572411 4 AACG .... scaffold35992 ScafM SNP 0030.scaffold00117 572441 1 C T scaffold35992 ScafM SNP 0030.scaffold00117 572443 1 A G scaffold35992 ScafM SNP 0030.scaffold00117 572535 1 G A scaffold35992 ScafM SNP 0030.scaffold00117 572568 1 C A scaffold35992 ScafM INDEL 0030.scaffold00117 572706 1 . A scaffold35992 ScafM SNP 0030.scaffold00117 572775 1 T C scaffold35992 ScafM INDEL 0030.scaffold00117 572839 1 T . scaffold35992 ScafM SNP 0030.scaffold00117 575510 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 575517 2 GA CT scaffold14099 ReadM SNP 0030.scaffold00117 575890 1 C T - Both SNP 0030.scaffold00117 575942 1 T G scaffold14099 Both INDEL 0030.scaffold00117 576014 1 C . scaffold14099 ScafM SNP 0030.scaffold00117 576051 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 576056 1 C G scaffold14099 ScafM SNP 0030.scaffold00117 576071 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 576075 1 G C scaffold14099 ScafM SNP 0030.scaffold00117 576097 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576105 1 T G scaffold14099 ScafM SNP 0030.scaffold00117 576109 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 576119 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576128 1 C A scaffold14099 ScafM SNP 0030.scaffold00117 576169 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 576178 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 576181 1 G C scaffold14099 ScafM SNP 0030.scaffold00117 576187 1 C T scaffold14099 Both SNP 0030.scaffold00117 576241 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 576267 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 576325 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576362 1 A T scaffold14099 ScafM INDEL 0030.scaffold00117 576375 1 . G scaffold14099 ScafM INDEL 0030.scaffold00117 576376 2 .. TG scaffold14099 ScafM SNP 0030.scaffold00117 576380 1 A T scaffold14099 ScafM INDEL 0030.scaffold00117 576392 1 A . scaffold14099 ScafM SNP 0030.scaffold00117 576442 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 576501 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 576511 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 576528 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576536 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576557 1 A T scaffold14099 ScafM INDEL 0030.scaffold00117 576585 1 T . scaffold14099 ScafM SNP 0030.scaffold00117 576600 1 G A scaffold14099 ScafM INDEL 0030.scaffold00117 576621 1 A . scaffold14099 ScafM SNP 0030.scaffold00117 576623 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 576631 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 576681 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 576683 1 C G scaffold14099 ScafM SNP 0030.scaffold00117 578806 1 A T scaffold13249 ScafM SNP 0030.scaffold00117 578822 1 C T scaffold13249 ScafM SNP 0030.scaffold00117 578827 1 C T scaffold13249 ScafM SNP 0030.scaffold00117 578841 1 A T scaffold13249 ScafM INDEL 0030.scaffold00117 578869 4 .... TTCT scaffold13249 ScafM SNP 0030.scaffold00117 578871 1 G C scaffold13249 ScafM INDEL 0030.scaffold00117 578875 2 .. AA scaffold13249 ScafM INDEL 0030.scaffold00117 578877 4 .... AACC scaffold13249 ScafM INDEL 0030.scaffold00117 578878 1 . C scaffold13249 ScafM SNP 0030.scaffold00117 578885 1 C A scaffold13249 ScafM SNP 0030.scaffold00117 578887 2 AC GT scaffold13249 ScafM SNP 0030.scaffold00117 578892 1 G A scaffold13249 ScafM SNP 0030.scaffold00117 578895 1 G A scaffold13249 ScafM SNP 0030.scaffold00117 578898 1 G A scaffold13249 ScafM INDEL 0030.scaffold00117 578901 4 GTTT .... scaffold13249 ScafM SNP 0030.scaffold00117 578907 1 A T scaffold13249 ScafM INDEL 0030.scaffold00117 578910 2 GT .A scaffold13249 ScafM SNP 0030.scaffold00117 578914 1 A G scaffold13249 ScafM SNP 0030.scaffold00117 578935 2 AC GT scaffold13249 ScafM SNP 0030.scaffold00117 578939 3 TTT AAA scaffold13249 ScafM SNP 0030.scaffold00117 578944 2 AA TG scaffold13249 ScafM SNP 0030.scaffold00117 578947 2 AA CT scaffold13249 ScafM INDEL 0030.scaffold00117 578953 1 T . scaffold13249 ScafM SNP 0030.scaffold00117 578955 1 T C scaffold13249 ScafM INDEL 0030.scaffold00117 578957 1 T . scaffold13249 ScafM SNP 0030.scaffold00117 578959 2 TC GG scaffold13249 ScafM SNP 0030.scaffold00117 578970 1 A G scaffold13249 ScafM SNP 0030.scaffold00117 578978 1 G A scaffold13249 ScafM SNP 0030.scaffold00117 578982 1 T C scaffold13249 ScafM SNP 0030.scaffold00117 578984 1 A T scaffold13249 ScafM SNP 0030.scaffold00117 578987 1 G C scaffold13249 ScafM SNP 0030.scaffold00117 578997 1 A G scaffold13249 ScafM INDEL 0030.scaffold00117 579013 1 . A scaffold13249 ScafM SNP 0030.scaffold00117 579027 1 G T scaffold13249 ScafM SNP 0030.scaffold00117 579029 5 TTTTT ACCAA scaffold13249 ScafM INDEL 0030.scaffold00117 579038 2 TC .. scaffold13249 ScafM SNP 0030.scaffold00117 579043 3 TTT GAA scaffold13249 ScafM SNP 0030.scaffold00117 579047 1 T G scaffold13249 ScafM SNP 0030.scaffold00117 579060 1 G A scaffold13249 ScafM SNP 0030.scaffold00117 579062 1 T G scaffold13249 ScafM INDEL 0030.scaffold00117 579080 2 AT .. scaffold13249 ScafM INDEL 0030.scaffold00117 579083 2 AA .. scaffold13249 ScafM SNP 0030.scaffold00117 579092 1 T A scaffold13249 ScafM SNP 0030.scaffold00117 579096 2 GA TC scaffold13249 ScafM SNP 0030.scaffold00117 579107 1 A G scaffold13249 ScafM SNP 0030.scaffold00117 579111 1 T C scaffold13249 ScafM SNP 0030.scaffold00117 579131 1 C A scaffold13249 ScafM SNP 0030.scaffold00117 579159 2 AA TG scaffold13249 ScafM INDEL 0030.scaffold00117 579194 1 T . scaffold13249 ScafM INDEL 0030.scaffold00117 579197 1 G . scaffold13249 ScafM SNP 0030.scaffold00117 579203 1 T C scaffold13249 ScafM SNP 0030.scaffold00117 579232 2 CA TC scaffold13249 ScafM INDEL 0030.scaffold00117 579255 2 GA .. scaffold13249 ScafM SNP 0030.scaffold00117 579258 1 A T scaffold13249 ScafM INDEL 0030.scaffold00117 579260 1 G . scaffold13249 ScafM SNP 0030.scaffold00117 579264 1 C G scaffold13249 ScafM SNP 0030.scaffold00117 579271 1 A C scaffold13249 ScafM SNP 0030.scaffold00117 579280 1 C A scaffold13249 ScafM SNP 0030.scaffold00117 579293 1 T G scaffold13249 ScafM SNP 0030.scaffold00117 579310 1 G T scaffold13249 ScafM INDEL 0030.scaffold00117 579317 6 ...... TTTTTG scaffold13249 ScafM INDEL 0030.scaffold00117 579323 1 . C scaffold13249 ScafM SNP 0030.scaffold00117 579349 1 C A scaffold13249 ScafM SNP 0030.scaffold00117 588989 1 A G scaffold11118 ScafM INDEL 0030.scaffold00117 589024 1 . T scaffold11118 ScafM SNP 0030.scaffold00117 589703 1 C G scaffold6289 ScafM SNP 0030.scaffold00117 589711 1 C T scaffold6289 ScafM INDEL 0030.scaffold00117 589718 1 . T scaffold6289 ScafM SNP 0030.scaffold00117 589808 1 T C scaffold6289 ScafM SNP 0030.scaffold00117 589846 1 T G scaffold6289 ScafM SNP 0030.scaffold00117 591733 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 591745 3 .AA CCC scaffold2437 ScafM SNP 0030.scaffold00117 591750 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 591754 1 C . scaffold2437 ScafM SNP 0030.scaffold00117 591756 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 591762 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 591803 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 591816 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 591822 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 591864 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 591878 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 591885 1 G T scaffold2437 ScafM INDEL 0030.scaffold00117 591968 2 .. TC scaffold2437 ScafM SNP 0030.scaffold00117 591981 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 591985 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 591997 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592014 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 592016 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 592019 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592029 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 592056 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 592076 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592084 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592101 2 TG GC scaffold2437 ScafM SNP 0030.scaffold00117 592124 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592141 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 592150 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 592167 1 T G scaffold2437 ScafM INDEL 0030.scaffold00117 592169 2 GT .A scaffold2437 ScafM SNP 0030.scaffold00117 592172 2 TT GC scaffold2437 ScafM SNP 0030.scaffold00117 592175 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592224 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592234 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 592245 2 .. CG scaffold2437 ScafM SNP 0030.scaffold00117 592246 1 T A scaffold2437 ScafM INDEL 0030.scaffold00117 592263 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 592313 2 CT TC scaffold2437 ScafM SNP 0030.scaffold00117 592324 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 592330 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592334 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 592339 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 592341 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 592344 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 592510 1 T A scaffold2437 ScafM INDEL 0030.scaffold00117 592526 1 . G scaffold2437 ScafM INDEL 0030.scaffold00117 592534 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 592563 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 592566 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 592685 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 592702 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 592707 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592718 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592744 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 592747 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 592764 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 592790 1 G . scaffold2437 ScafM INDEL 0030.scaffold00117 592794 5 ..... AAAAA scaffold2437 ScafM SNP 0030.scaffold00117 592808 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 592816 1 . C scaffold2437 ScafM SNP 0030.scaffold00117 592818 1 A C scaffold2437 ScafM INDEL 0030.scaffold00117 592832 2 .. AC scaffold2437 ScafM SNP 0030.scaffold00117 592849 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 592857 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 592862 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 592943 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 592955 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 592960 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 592970 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 592975 1 . C scaffold2437 ScafM INDEL 0030.scaffold00117 592981 10 .......... CGCGTAATAA scaffold2437 ScafM INDEL 0030.scaffold00117 592983 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 592995 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 592999 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 593006 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 593010 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 593042 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 593046 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 593052 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 593064 2 CT TG scaffold2437 ScafM SNP 0030.scaffold00117 595294 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 595301 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 595318 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 595321 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 595335 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 595342 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 595351 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 595370 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 595375 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 595387 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 595389 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 595419 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 595424 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 595444 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 595467 3 GTT AAA scaffold2437 ScafM SNP 0030.scaffold00117 595484 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 595521 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 595552 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 596723 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 596763 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 596774 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 596797 4 .... AAAT scaffold2437 ScafM SNP 0030.scaffold00117 596843 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 596858 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 596883 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 596895 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 596906 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 598334 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 598350 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 598410 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 598414 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 598423 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 598425 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 598429 2 AA TG scaffold2437 ScafM INDEL 0030.scaffold00117 598437 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 598458 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 598471 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 598476 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 598547 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 598558 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 598567 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 598571 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 598574 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 598625 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 598826 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 598867 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 598871 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 598875 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 598898 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 598938 2 TT AA scaffold2437 ScafM SNP 0030.scaffold00117 598955 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 598962 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 599016 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 599019 8 ........ TAAATTTA scaffold2437 ScafM SNP 0030.scaffold00117 599333 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 599339 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 599377 2 TG AA scaffold2437 ScafM SNP 0030.scaffold00117 599400 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 599407 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 599414 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 599418 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 599425 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 599434 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 599438 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 599444 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 599447 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 599455 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 599457 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 599482 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 599512 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 599515 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 599520 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 599532 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 599550 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 599562 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 599566 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 599598 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 599601 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 599643 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 599692 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 599705 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 599708 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 599712 1 A T scaffold2437 ScafM INDEL 0030.scaffold00117 599713 4 .... TTTT scaffold2437 ScafM INDEL 0030.scaffold00117 599741 1 . G scaffold2437 ScafM SNP 0030.scaffold00117 599750 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 599760 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 599775 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 599815 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 599985 2 .. GA scaffold2437 ScafM SNP 0030.scaffold00117 599989 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 599993 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 600021 2 AA .. scaffold2437 ScafM SNP 0030.scaffold00117 600025 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 600053 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 600084 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 600115 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 600507 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600516 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600527 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 600531 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600534 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 600572 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 600579 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 600601 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600603 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600648 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 600655 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 600664 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 600683 2 GA AG scaffold2437 ScafM INDEL 0030.scaffold00117 600692 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 600709 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 600729 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600739 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 600756 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 600764 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 600768 2 AG TC scaffold2437 ScafM SNP 0030.scaffold00117 600772 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 600782 1 A T scaffold2437 ScafM INDEL 0030.scaffold00117 600784 2 AA .. scaffold2437 ScafM INDEL 0030.scaffold00117 600812 1 . A scaffold2437 ScafM SNP 0030.scaffold00117 600817 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 600821 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 600850 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 600861 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 600869 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 600873 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 600875 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 605835 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 605837 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 605854 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 605869 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 605879 1 T A scaffold2437 ScafM INDEL 0030.scaffold00117 605885 4 .... AGTT scaffold2437 ScafM SNP 0030.scaffold00117 605898 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 605925 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 605933 1 A C scaffold2437 ScafM INDEL 0030.scaffold00117 605977 3 ... TTT scaffold2437 ScafM SNP 0030.scaffold00117 606042 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 606054 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 606057 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 606066 2 TT AA scaffold2437 ScafM INDEL 0030.scaffold00117 606068 2 .. AT scaffold2437 ScafM INDEL 0030.scaffold00117 606118 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 606135 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 606153 2 AG TA scaffold2437 ScafM SNP 0030.scaffold00117 607139 1 A C scaffold5568 ScafM INDEL 0030.scaffold00117 607322 13 ............. GGATTGCGAGCAA scaffold5568 Both SNP 0030.scaffold00117 607417 1 A G scaffold5568 ScafM SNP 0030.scaffold00117 607654 1 A T scaffold5568 ScafM INDEL 0030.scaffold00117 608051 9 ......... AATAGATTA scaffold5568 ScafM SNP 0030.scaffold00117 608054 1 C G scaffold5568 Both SNP 0030.scaffold00117 608108 1 T A scaffold5568 Both SNP 0030.scaffold00117 608211 1 A C scaffold5568 ScafM SNP 0030.scaffold00117 608387 1 T A scaffold5568 ScafM SNP 0030.scaffold00117 608557 1 A T scaffold5568 ScafM SNP 0030.scaffold00117 608631 1 G T scaffold5568 ScafM INDEL 0030.scaffold00117 608744 1 A . scaffold5568 ScafM SNP 0030.scaffold00117 608862 1 G A scaffold5568 ScafM SNP 0030.scaffold00117 608920 1 A G scaffold5568 ReadM SNP 0030.scaffold00117 614168 1 A T - ScafM SNP 0030.scaffold00117 615503 1 A G scaffold5568 ScafM SNP 0030.scaffold00117 615555 1 A G scaffold5568 ScafM INDEL 0030.scaffold00117 615896 8 ACAGCATG ........ scaffold5568 ScafM SNP 0030.scaffold00117 616002 1 T A scaffold5568 ScafM INDEL 0030.scaffold00117 616055 2 .T CC scaffold5568 ScafM SNP 0030.scaffold00117 616069 1 C G scaffold5568 ScafM SNP 0030.scaffold00117 616254 1 G T scaffold5568 ScafM INDEL 0030.scaffold00117 616302 78 TTAGTTATCACAACTTGTTTTTAGACAATGATTTTATTGTATTGAATGTGGCTCAACAACGAGGTTTATTGTATTGAA .............................................................................. scaffold5568 ScafM SNP 0030.scaffold00117 616406 1 A T scaffold5568 ScafM SNP 0030.scaffold00117 617566 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 617580 5 ..... CTGGA scaffold2437 ScafM SNP 0030.scaffold00117 617613 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 617807 2 CA TG scaffold2437 ScafM SNP 0030.scaffold00117 617816 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 617819 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 617841 1 C A scaffold2437 ScafM INDEL 0030.scaffold00117 617850 3 ... AAT scaffold2437 ScafM SNP 0030.scaffold00117 617854 2 GG AA scaffold2437 ScafM INDEL 0030.scaffold00117 617860 1 . C scaffold2437 ScafM SNP 0030.scaffold00117 617871 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 617879 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 617886 2 AC TA scaffold2437 ScafM SNP 0030.scaffold00117 617890 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 617925 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 617944 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 617946 1 C A scaffold2437 ScafM INDEL 0030.scaffold00117 617957 3 ATC ... scaffold2437 ScafM SNP 0030.scaffold00117 617973 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 617985 2 CA TC scaffold2437 ScafM SNP 0030.scaffold00117 618018 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 618024 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 618026 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 618041 2 TA CC scaffold2437 ScafM SNP 0030.scaffold00117 618054 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 618062 1 T . scaffold2437 ScafM SNP 0030.scaffold00117 618073 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 618085 1 C . scaffold2437 ScafM SNP 0030.scaffold00117 618089 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 618091 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 618106 2 CG TA scaffold2437 ScafM INDEL 0030.scaffold00117 618118 2 .A GG scaffold2437 ScafM SNP 0030.scaffold00117 618124 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 618149 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 618177 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 618494 4 .... AAGA scaffold2437 ScafM SNP 0030.scaffold00117 618496 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 618512 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 618522 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 618567 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 618570 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 618575 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 618921 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 618959 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 618964 1 T A scaffold2437 ScafM INDEL 0030.scaffold00117 618974 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 619001 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 619007 2 .. AG scaffold2437 ScafM SNP 0030.scaffold00117 619035 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619048 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619056 1 C G scaffold2437 ScafM INDEL 0030.scaffold00117 619067 2 AC .. scaffold2437 ScafM SNP 0030.scaffold00117 619076 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 619088 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 619099 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619109 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 619131 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619137 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619164 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 619167 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619170 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619182 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619184 2 CA TG scaffold2437 ScafM SNP 0030.scaffold00117 619192 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 619195 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 619203 1 A . scaffold2437 ScafM INDEL 0030.scaffold00117 619212 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 619214 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 619216 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619227 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 619231 1 . C scaffold2437 ScafM SNP 0030.scaffold00117 619243 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619245 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 619259 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619275 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 619279 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 619308 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619321 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 619340 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 619485 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 619512 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 619529 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 619550 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 619571 1 A C scaffold18853 ScafM SNP 0030.scaffold00117 619607 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619629 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 619638 1 T G scaffold18853 ScafM SNP 0030.scaffold00117 619698 2 CG GA scaffold18853 ScafM SNP 0030.scaffold00117 619704 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 619706 3 CCG TAA scaffold18853 ScafM SNP 0030.scaffold00117 619744 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619776 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619793 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619797 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619807 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 619814 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 619832 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619838 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 619846 1 C G scaffold18853 ScafM SNP 0030.scaffold00117 619887 1 A C scaffold18853 ScafM SNP 0030.scaffold00117 619900 1 C T scaffold18853 ScafM INDEL 0030.scaffold00117 619945 1 . G scaffold18853 ScafM INDEL 0030.scaffold00117 620024 7 ....... ATTTAGC scaffold18853 ScafM INDEL 0030.scaffold00117 620026 16 ................ TTTAGTATGTCATTTT scaffold18853 ScafM INDEL 0030.scaffold00117 620028 5 ..... TAACA scaffold18853 ScafM SNP 0030.scaffold00117 620039 1 C A scaffold18853 ScafM SNP 0030.scaffold00117 620047 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 620063 1 T A scaffold18853 ScafM SNP 0030.scaffold00117 620092 2 AG TC scaffold18853 ScafM SNP 0030.scaffold00117 620107 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 620114 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620121 1 C A scaffold18853 ScafM SNP 0030.scaffold00117 620155 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620159 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620183 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 620194 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620291 1 T C scaffold18853 ScafM INDEL 0030.scaffold00117 620293 1 . T scaffold18853 ScafM SNP 0030.scaffold00117 620364 1 C A scaffold18853 ScafM SNP 0030.scaffold00117 620388 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 620447 1 T A scaffold18853 ScafM SNP 0030.scaffold00117 620484 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620493 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 620521 1 T G scaffold18853 ScafM SNP 0030.scaffold00117 620544 1 T C scaffold18853 ScafM SNP 0030.scaffold00117 620584 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620599 4 ACAA GTTG scaffold18853 ScafM INDEL 0030.scaffold00117 620652 1 . A scaffold18853 ScafM SNP 0030.scaffold00117 620669 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 620683 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 620706 1 G A scaffold18853 ScafM SNP 0030.scaffold00117 620713 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620719 1 G T scaffold18853 ScafM SNP 0030.scaffold00117 620736 1 A G scaffold18853 ScafM SNP 0030.scaffold00117 620764 1 C A scaffold18853 ScafM SNP 0030.scaffold00117 620774 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620778 1 C T scaffold18853 ScafM SNP 0030.scaffold00117 620957 2 AC TA scaffold18951 ScafM SNP 0030.scaffold00117 620983 1 G T scaffold18951 ScafM SNP 0030.scaffold00117 620987 1 T G scaffold18951 ScafM SNP 0030.scaffold00117 621061 2 AA TT scaffold18951 ScafM SNP 0030.scaffold00117 621135 1 C T scaffold18951 ScafM SNP 0030.scaffold00117 621176 1 T G scaffold18951 ScafM SNP 0030.scaffold00117 621202 1 A G scaffold18951 ScafM SNP 0030.scaffold00117 621207 1 G A scaffold18951 ScafM SNP 0030.scaffold00117 621227 1 T G scaffold18951 ScafM INDEL 0030.scaffold00117 621229 2 TT .. scaffold18951 ScafM SNP 0030.scaffold00117 621305 1 T C scaffold18951 ScafM SNP 0030.scaffold00117 621362 1 A C scaffold18951 ScafM SNP 0030.scaffold00117 622007 1 A G scaffold12106 ScafM SNP 0030.scaffold00117 622062 1 T A scaffold12106 ScafM SNP 0030.scaffold00117 622094 1 T G scaffold12106 ScafM SNP 0030.scaffold00117 622099 1 A T scaffold12106 ScafM SNP 0030.scaffold00117 622118 2 GA AG scaffold12106 ScafM SNP 0030.scaffold00117 622143 1 T G scaffold12106 ScafM SNP 0030.scaffold00117 622158 1 A G scaffold12106 ScafM SNP 0030.scaffold00117 622189 1 G A scaffold12106 ScafM SNP 0030.scaffold00117 622197 1 T C scaffold12106 ScafM SNP 0030.scaffold00117 622220 1 T G scaffold12106 ScafM SNP 0030.scaffold00117 622239 1 C A scaffold12106 ScafM SNP 0030.scaffold00117 622314 1 G C scaffold12106 ScafM SNP 0030.scaffold00117 622357 1 C G scaffold12106 ScafM SNP 0030.scaffold00117 622362 1 T C scaffold12106 ScafM SNP 0030.scaffold00117 622386 1 C T scaffold12106 ScafM SNP 0030.scaffold00117 622997 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 623030 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 623036 2 CA TC scaffold2437 ScafM SNP 0030.scaffold00117 623042 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 623049 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 623051 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 623055 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 623062 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 623070 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 623077 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 623093 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 623095 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 623122 3 AAT ... scaffold2437 ScafM SNP 0030.scaffold00117 623332 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 623337 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 623352 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 623371 1 A C scaffold2437 ScafM INDEL 0030.scaffold00117 623373 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 623772 1 T G scaffold3948 ScafM SNP 0030.scaffold00117 623800 1 G A scaffold3948 ScafM INDEL 0030.scaffold00117 623838 3 ... TTT scaffold3948 Both SNP 0030.scaffold00117 624018 1 T C scaffold3948 Both SNP 0030.scaffold00117 624323 1 A T scaffold3948 ScafM SNP 0030.scaffold00117 624455 1 G C scaffold3948 Both SNP 0030.scaffold00117 624703 1 C T scaffold3948 Both SNP 0030.scaffold00117 624788 1 T C scaffold3948 Both SNP 0030.scaffold00117 625046 1 T C scaffold3948 Both SNP 0030.scaffold00117 625063 1 A C scaffold3948 Both SNP 0030.scaffold00117 625070 1 C T scaffold3948 Both SNP 0030.scaffold00117 625139 1 T A scaffold3948 Both SNP 0030.scaffold00117 625365 1 A G scaffold3948 ScafM INDEL 0030.scaffold00117 625487 4 TGAA .... scaffold3948 Both SNP 0030.scaffold00117 625580 1 T A scaffold3948 Both SNP 0030.scaffold00117 625615 1 G A scaffold3948 Both SNP 0030.scaffold00117 625750 1 T C scaffold3948 Both SNP 0030.scaffold00117 625792 1 T G scaffold3948 ReadM SNP 0030.scaffold00117 626132 1 T A - Both SNP 0030.scaffold00117 626480 1 T A scaffold3948 Both SNP 0030.scaffold00117 626592 1 T C scaffold3948 ScafM SNP 0030.scaffold00117 626753 1 G T scaffold3948 ScafM SNP 0030.scaffold00117 627279 1 C T scaffold3948 ScafM INDEL 0030.scaffold00117 627374 30 TGTTAGGCATACACATCTATATATGATATT .............................. scaffold3948 ScafM SNP 0030.scaffold00117 627418 1 C T scaffold3948 ScafM SNP 0030.scaffold00117 627436 1 A T scaffold3948 ScafM SNP 0030.scaffold00117 627493 1 T A scaffold3948 ScafM INDEL 0030.scaffold00117 627498 23 ....................... ACGAAAATTCATGCCCAAAAAAA scaffold3948 ScafM SNP 0030.scaffold00117 627549 1 G A scaffold3948 ScafM SNP 0030.scaffold00117 627609 1 G A scaffold3948 ReadM SNP 0030.scaffold00117 627772 1 A G - ScafM SNP 0030.scaffold00117 628499 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 628535 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 628537 1 A T scaffold2437 ScafM INDEL 0030.scaffold00117 628553 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 628576 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 628628 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 628671 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 628713 1 . A scaffold2437 ScafM SNP 0030.scaffold00117 628736 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 628758 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 628769 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 628776 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 628790 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 628792 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 628799 1 A C scaffold2437 ScafM INDEL 0030.scaffold00117 628810 5 TAAAT ..... scaffold2437 ScafM SNP 0030.scaffold00117 628828 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 628838 2 .. AG scaffold2437 ScafM INDEL 0030.scaffold00117 628840 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 628842 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 628843 7 ....... TGACACA scaffold2437 ScafM INDEL 0030.scaffold00117 628846 4 .... AGCA scaffold2437 ScafM SNP 0030.scaffold00117 628852 1 C T scaffold2437 ScafM INDEL 0030.scaffold00117 628887 5 ..... CTGGC scaffold2437 ScafM SNP 0030.scaffold00117 628898 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 628905 1 G . scaffold2437 ScafM SNP 0030.scaffold00117 628907 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 628921 2 GT AC scaffold2437 ScafM SNP 0030.scaffold00117 628927 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 628962 1 A C scaffold2437 ScafM INDEL 0030.scaffold00117 628972 2 TT .. scaffold2437 ScafM SNP 0030.scaffold00117 629034 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 629069 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 629074 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 629089 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 629104 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 629118 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629134 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 629148 1 C . scaffold2437 ScafM SNP 0030.scaffold00117 629158 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 629165 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 629199 1 C A scaffold2437 ScafM INDEL 0030.scaffold00117 629204 2 GG .. scaffold2437 ScafM SNP 0030.scaffold00117 629209 1 G A scaffold2437 Both SNP 0030.scaffold00117 629233 1 A T scaffold2437 Both SNP 0030.scaffold00117 629298 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629351 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629357 2 GC TG scaffold2437 ScafM SNP 0030.scaffold00117 629372 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629391 2 AG TC scaffold2437 ScafM SNP 0030.scaffold00117 629398 1 C G scaffold2437 ScafM SNP 0030.scaffold00117 629412 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 629426 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 629434 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 629572 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 629575 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 629602 2 TA CG scaffold2437 ScafM SNP 0030.scaffold00117 629611 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629637 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 629652 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 629678 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 629709 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 629724 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 629809 1 T C scaffold6297 ScafM SNP 0030.scaffold00117 629834 1 A G scaffold6297 ScafM INDEL 0030.scaffold00117 629854 1 . A scaffold6297 ScafM SNP 0030.scaffold00117 629872 1 G A scaffold6297 ScafM SNP 0030.scaffold00117 629884 1 A G scaffold6297 ScafM SNP 0030.scaffold00117 629892 1 A G scaffold6297 ScafM SNP 0030.scaffold00117 629904 1 A G scaffold6297 ScafM SNP 0030.scaffold00117 629926 1 G A scaffold6297 ScafM SNP 0030.scaffold00117 629930 1 T C scaffold6297 ScafM SNP 0030.scaffold00117 629948 2 GA AC scaffold6297 ScafM SNP 0030.scaffold00117 629981 2 AC GT scaffold6297 ScafM SNP 0030.scaffold00117 629985 2 GC CG scaffold6297 ScafM INDEL 0030.scaffold00117 630005 2 .. AC scaffold6297 ScafM SNP 0030.scaffold00117 630066 1 A G scaffold6297 ScafM SNP 0030.scaffold00117 630070 1 C G scaffold6297 ScafM SNP 0030.scaffold00117 631444 1 A G scaffold71211 ScafM SNP 0030.scaffold00117 631451 1 G A scaffold71211 ScafM SNP 0030.scaffold00117 631455 1 A G scaffold71211 ScafM INDEL 0030.scaffold00117 631483 1 A . scaffold71211 ScafM INDEL 0030.scaffold00117 631654 1 . T scaffold71211 ScafM SNP 0030.scaffold00117 631656 1 A T scaffold71211 ScafM SNP 0030.scaffold00117 631684 1 A G scaffold71211 ScafM SNP 0030.scaffold00117 631693 1 A G scaffold71211 ScafM SNP 0030.scaffold00117 631697 1 T C scaffold71211 ScafM SNP 0030.scaffold00117 631704 1 G T scaffold71211 ScafM SNP 0030.scaffold00117 631710 1 A C scaffold71211 ScafM SNP 0030.scaffold00117 631715 1 G A scaffold71211 ScafM INDEL 0030.scaffold00117 631720 2 .. CC scaffold71211 ScafM SNP 0030.scaffold00117 631752 1 T C scaffold71211 ScafM SNP 0030.scaffold00117 631795 1 A G scaffold71211 ScafM INDEL 0030.scaffold00117 631839 1 G . scaffold71211 ScafM SNP 0030.scaffold00117 631860 1 T A scaffold71211 ScafM SNP 0030.scaffold00117 631868 1 A G scaffold71211 ScafM SNP 0030.scaffold00117 631877 1 T A scaffold71211 ScafM SNP 0030.scaffold00117 631906 1 G C scaffold71211 ScafM INDEL 0030.scaffold00117 631929 1 . A scaffold71211 ScafM SNP 0030.scaffold00117 631931 1 T G scaffold71211 ScafM SNP 0030.scaffold00117 632186 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 632211 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632213 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 632218 2 CC AT scaffold2437 ScafM INDEL 0030.scaffold00117 632246 2 .T CG scaffold2437 ScafM SNP 0030.scaffold00117 632250 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 632252 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632270 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632273 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 632275 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632287 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 632291 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 632298 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 632301 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 632313 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 632321 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632331 1 C A scaffold2437 ScafM INDEL 0030.scaffold00117 632350 2 .. GA scaffold2437 ScafM SNP 0030.scaffold00117 632351 1 T A scaffold2437 ScafM INDEL 0030.scaffold00117 632364 1 . T scaffold2437 ScafM SNP 0030.scaffold00117 632376 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 632382 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632384 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632419 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632450 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 632458 4 .... GCAG scaffold2437 ScafM SNP 0030.scaffold00117 632464 1 G C scaffold2437 ScafM SNP 0030.scaffold00117 632511 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 632515 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 632538 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632551 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632618 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632622 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 632644 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 632652 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 632679 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632687 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 632703 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 632714 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 632734 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632737 1 G A scaffold2437 ScafM INDEL 0030.scaffold00117 632753 2 .. AA scaffold2437 ScafM SNP 0030.scaffold00117 632767 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 632770 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 632878 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 632880 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 632901 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 632903 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 632921 1 T A scaffold2437 ScafM SNP 0030.scaffold00117 632932 1 T G scaffold2437 ScafM SNP 0030.scaffold00117 639339 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 639355 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 639358 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 639362 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 639392 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 639451 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 639469 1 G T scaffold2437 ScafM SNP 0030.scaffold00117 639513 1 T C scaffold2437 ScafM INDEL 0030.scaffold00117 639549 1 A . scaffold2437 ScafM SNP 0030.scaffold00117 639562 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 639569 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 639606 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 639615 1 A C scaffold2437 ScafM SNP 0030.scaffold00117 639665 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 639671 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 639681 2 CC AG scaffold2437 ScafM SNP 0030.scaffold00117 639684 1 G A scaffold2437 ScafM SNP 0030.scaffold00117 639692 1 A T scaffold2437 ScafM SNP 0030.scaffold00117 639700 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 639719 1 A G scaffold2437 ScafM SNP 0030.scaffold00117 639742 1 A G scaffold2437 ScafM INDEL 0030.scaffold00117 639749 3 ... TAA scaffold2437 ScafM SNP 0030.scaffold00117 639755 1 G C scaffold2437 ScafM INDEL 0030.scaffold00117 639764 2 .. TT scaffold2437 ScafM SNP 0030.scaffold00117 639833 1 A T scaffold2437 ScafM INDEL 0030.scaffold00117 639846 2 TT .. scaffold2437 ScafM SNP 0030.scaffold00117 639864 1 C T scaffold2437 Both SNP 0030.scaffold00117 639893 1 C G scaffold2437 ReadM SNP 0030.scaffold00117 639934 1 T A - ScafM SNP 0030.scaffold00117 640462 1 C T scaffold2437 ScafM SNP 0030.scaffold00117 640477 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 640502 2 CA TG scaffold2437 ScafM SNP 0030.scaffold00117 640514 2 GC CG scaffold2437 ScafM SNP 0030.scaffold00117 640533 1 C A scaffold2437 ScafM SNP 0030.scaffold00117 640535 2 CA AC scaffold2437 ScafM SNP 0030.scaffold00117 640542 1 T C scaffold2437 ScafM SNP 0030.scaffold00117 642038 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 642040 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 642043 1 T A scaffold2551 ScafM SNP 0030.scaffold00117 642071 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 642080 1 G T scaffold2551 ScafM SNP 0030.scaffold00117 642082 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 642147 1 C A scaffold2551 ScafM SNP 0030.scaffold00117 642165 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 642167 2 .. AA scaffold2551 ScafM SNP 0030.scaffold00117 642193 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 642208 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 642218 1 G C scaffold2551 ScafM SNP 0030.scaffold00117 642221 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 642230 4 AAGT .... scaffold2551 ScafM INDEL 0030.scaffold00117 642235 6 TCATCA ...... scaffold2551 ScafM INDEL 0030.scaffold00117 642268 1 . C scaffold2551 ScafM SNP 0030.scaffold00117 642275 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 642282 1 G T scaffold2551 ScafM SNP 0030.scaffold00117 642289 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 642294 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 642304 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 643766 1 G A scaffold2551 ScafM INDEL 0030.scaffold00117 643814 7 AAAATTG ....... scaffold2551 ScafM SNP 0030.scaffold00117 643826 1 C A scaffold2551 ScafM INDEL 0030.scaffold00117 643829 2 AA .C scaffold2551 ScafM SNP 0030.scaffold00117 643859 1 C G scaffold2551 ScafM INDEL 0030.scaffold00117 643880 1 A . scaffold2551 ScafM SNP 0030.scaffold00117 643882 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 643909 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 643941 1 A C scaffold2551 ScafM SNP 0030.scaffold00117 644235 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 644239 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 644243 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 644255 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 644513 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 644520 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 644575 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 644602 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 644611 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 644623 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 644634 1 C G scaffold2551 ScafM SNP 0030.scaffold00117 644643 1 G C scaffold2551 ScafM SNP 0030.scaffold00117 644674 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 644678 1 . G scaffold2551 ScafM INDEL 0030.scaffold00117 644693 1 A . scaffold2551 ScafM SNP 0030.scaffold00117 644699 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 644720 1 T A scaffold2551 ScafM SNP 0030.scaffold00117 650444 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 650461 1 T G scaffold2551 ScafM INDEL 0030.scaffold00117 650466 8 TCATAAAT ........ scaffold2551 ScafM INDEL 0030.scaffold00117 650575 1 . T scaffold2551 ScafM SNP 0030.scaffold00117 650594 2 CC TG scaffold2551 ScafM SNP 0030.scaffold00117 650601 1 G T scaffold2551 ScafM SNP 0030.scaffold00117 650606 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 650611 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 650613 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 650628 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 650631 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 650637 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 650652 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 650665 1 A G scaffold2551 ScafM INDEL 0030.scaffold00117 651005 17 GCATGGTATGGCAATAT ................. scaffold2551 ScafM SNP 0030.scaffold00117 651057 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651059 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651076 1 A G scaffold2551 ScafM INDEL 0030.scaffold00117 651097 1 T . scaffold2551 ScafM SNP 0030.scaffold00117 651120 2 AG GT scaffold2551 ScafM INDEL 0030.scaffold00117 651134 1 A . scaffold2551 ScafM SNP 0030.scaffold00117 651160 1 T A scaffold2551 ScafM SNP 0030.scaffold00117 651177 1 C T scaffold2551 ScafM INDEL 0030.scaffold00117 651185 1 T . scaffold2551 ScafM SNP 0030.scaffold00117 651187 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 651189 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651197 1 C A scaffold2551 ScafM SNP 0030.scaffold00117 651207 1 T C scaffold2551 ScafM SNP 0030.scaffold00117 651209 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 651223 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651235 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 651248 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651270 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 651297 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 651310 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 651319 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651326 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 651328 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651341 1 A G scaffold2551 ScafM SNP 0030.scaffold00117 651350 1 G A scaffold2551 ScafM INDEL 0030.scaffold00117 651375 2 AA .G scaffold2551 ScafM SNP 0030.scaffold00117 651389 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651393 1 T G scaffold2551 ScafM SNP 0030.scaffold00117 651454 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 651475 1 . C scaffold2551 ScafM SNP 0030.scaffold00117 651500 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651517 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 651531 1 A T scaffold2551 ScafM SNP 0030.scaffold00117 651544 1 G A scaffold2551 ScafM SNP 0030.scaffold00117 651552 1 A G scaffold2551 ScafM INDEL 0030.scaffold00117 651558 1 . A scaffold2551 ScafM SNP 0030.scaffold00117 651564 1 A T scaffold2551 ScafM INDEL 0030.scaffold00117 651585 3 CTA ... scaffold2551 ScafM INDEL 0030.scaffold00117 651589 2 GC .. scaffold2551 ScafM SNP 0030.scaffold00117 654349 1 C T scaffold2551 ScafM SNP 0030.scaffold00117 654353 1 C G scaffold2551 ScafM SNP 0030.scaffold00117 654390 1 A C scaffold2551 ReadM SNP 0030.scaffold00117 655382 1 C T - ReadM SNP 0030.scaffold00117 656187 1 T C - ReadM SNP 0030.scaffold00117 656264 1 T C - ReadM SNP 0030.scaffold00117 656289 1 C A - ReadM SNP 0030.scaffold00117 656306 1 C T - ReadM SNP 0030.scaffold00117 656398 1 T C - ReadM SNP 0030.scaffold00117 656416 1 T C - ReadM SNP 0030.scaffold00117 656703 1 G T - ReadM SNP 0030.scaffold00117 656753 1 G A - ReadM SNP 0030.scaffold00117 656759 1 A G - ReadM SNP 0030.scaffold00117 656963 1 A G - ReadM SNP 0030.scaffold00117 656981 1 G A - ReadM SNP 0030.scaffold00117 657224 1 T C - ReadM SNP 0030.scaffold00117 657262 1 T C - ReadM SNP 0030.scaffold00117 657266 1 C A - ReadM SNP 0030.scaffold00117 657363 1 C T - ReadM SNP 0030.scaffold00117 657368 1 A G - ReadM SNP 0030.scaffold00117 657508 1 A T - ReadM SNP 0030.scaffold00117 658739 1 T A - ReadM SNP 0030.scaffold00117 660248 1 C T - ReadM SNP 0030.scaffold00117 660266 1 G T - ReadM SNP 0030.scaffold00117 660316 1 C G - ReadM INDEL 0030.scaffold00117 660638 2 AG .. - ReadM SNP 0030.scaffold00117 660752 1 T C - ReadM SNP 0030.scaffold00117 660836 1 G T - ReadM SNP 0030.scaffold00117 660847 1 T C - ReadM SNP 0030.scaffold00117 661203 1 T C - ReadM SNP 0030.scaffold00117 661224 1 C T - ReadM SNP 0030.scaffold00117 661248 1 C T - ReadM SNP 0030.scaffold00117 662001 1 A G - ScafM SNP 0030.scaffold00117 665120 1 A G scaffold2551 ScafM INDEL 0030.scaffold00117 665601 1 A . scaffold2551 ScafM INDEL 0030.scaffold00117 665606 1 G . scaffold2551 ScafM SNP 0030.scaffold00117 665643 1 T C scaffold2551 ReadM SNP 0030.scaffold00117 667188 1 T A - ReadM SNP 0030.scaffold00117 667197 1 C G - ReadM SNP 0030.scaffold00117 667289 1 C T - ReadM SNP 0030.scaffold00117 667311 1 A T - ScafM SNP 0030.scaffold00117 667534 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 667585 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 667620 2 .. AG scaffold6167 ScafM INDEL 0030.scaffold00117 667623 1 C . scaffold6167 ScafM SNP 0030.scaffold00117 667636 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 667640 2 AC .. scaffold6167 ScafM SNP 0030.scaffold00117 667656 1 T G scaffold6167 ScafM INDEL 0030.scaffold00117 667677 1 G . scaffold6167 ScafM SNP 0030.scaffold00117 667682 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 667704 1 C G scaffold6167 ScafM SNP 0030.scaffold00117 667761 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 667771 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 667829 1 . G scaffold6167 ScafM SNP 0030.scaffold00117 667834 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 667836 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 667839 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 667877 2 GG TT scaffold6167 ScafM SNP 0030.scaffold00117 668247 1 C A scaffold22443 ScafM SNP 0030.scaffold00117 668345 2 CC TT scaffold22443 ScafM SNP 0030.scaffold00117 668445 1 G A scaffold22443 ScafM SNP 0030.scaffold00117 668498 1 A C scaffold22443 ScafM SNP 0030.scaffold00117 668507 1 T A scaffold22443 ScafM INDEL 0030.scaffold00117 668565 7 ....... GTTACAA scaffold22443 ScafM SNP 0030.scaffold00117 668580 1 A C scaffold22443 ScafM SNP 0030.scaffold00117 668600 1 A T scaffold22443 ScafM SNP 0030.scaffold00117 668624 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 668680 1 A C scaffold22443 ScafM INDEL 0030.scaffold00117 668694 1 C . scaffold22443 ScafM SNP 0030.scaffold00117 668826 1 C T scaffold22443 ScafM INDEL 0030.scaffold00117 668841 2 AA .. scaffold22443 Both SNP 0030.scaffold00117 668964 1 A C scaffold22443 ScafM SNP 0030.scaffold00117 669006 1 A T scaffold22443 ScafM SNP 0030.scaffold00117 669020 1 T G scaffold22443 ScafM SNP 0030.scaffold00117 669026 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669052 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669120 1 A C scaffold22443 ScafM SNP 0030.scaffold00117 669139 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669167 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 669169 1 A T scaffold22443 ScafM INDEL 0030.scaffold00117 669183 2 .. AT scaffold22443 ScafM SNP 0030.scaffold00117 669191 1 A C scaffold22443 ScafM SNP 0030.scaffold00117 669262 1 T C scaffold22443 Both SNP 0030.scaffold00117 669374 1 G T scaffold22443 Both SNP 0030.scaffold00117 669384 1 G T scaffold22443 Both SNP 0030.scaffold00117 669461 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669475 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 669480 1 T C scaffold22443 ScafM SNP 0030.scaffold00117 669487 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 669525 1 C A scaffold22443 ScafM SNP 0030.scaffold00117 669695 1 T C scaffold22443 ScafM SNP 0030.scaffold00117 669717 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 669755 1 G A scaffold22443 ScafM INDEL 0030.scaffold00117 669758 3 AGA ... scaffold22443 ScafM SNP 0030.scaffold00117 669831 1 C T scaffold22443 ScafM INDEL 0030.scaffold00117 669841 15 TTCTACAAACACAAT ............... scaffold22443 Both SNP 0030.scaffold00117 669882 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669986 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 669994 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 670016 1 T A scaffold22443 ScafM SNP 0030.scaffold00117 670074 1 T A scaffold22443 ScafM SNP 0030.scaffold00117 670090 1 A T scaffold22443 ScafM SNP 0030.scaffold00117 670128 1 C T scaffold22443 ScafM SNP 0030.scaffold00117 670136 1 T C scaffold22443 ScafM SNP 0030.scaffold00117 670138 1 G A scaffold22443 ScafM SNP 0030.scaffold00117 670160 1 C G scaffold22443 ScafM SNP 0030.scaffold00117 670191 1 C G scaffold22443 ScafM SNP 0030.scaffold00117 670196 1 G A scaffold22443 ScafM SNP 0030.scaffold00117 670198 1 T C scaffold22443 ScafM INDEL 0030.scaffold00117 670203 6 ...... CGCATA scaffold22443 ScafM SNP 0030.scaffold00117 670211 1 G A scaffold22443 ScafM INDEL 0030.scaffold00117 670235 15 ............... GAATATTGAAATAAC scaffold22443 ScafM SNP 0030.scaffold00117 670248 1 A G scaffold22443 ScafM SNP 0030.scaffold00117 670258 1 C T scaffold22443 ReadM INDEL 0030.scaffold00117 670442 1 T . - ScafM INDEL 0030.scaffold00117 670442 2 TT .A scaffold22443 ScafM SNP 0030.scaffold00117 670451 1 T A scaffold22443 ScafM SNP 0030.scaffold00117 670946 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 670977 1 G A scaffold14099 ScafM INDEL 0030.scaffold00117 671045 1 . A scaffold14099 ScafM SNP 0030.scaffold00117 671047 1 G T scaffold14099 ScafM SNP 0030.scaffold00117 671093 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 671170 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 676950 1 T G scaffold14099 ScafM INDEL 0030.scaffold00117 677023 2 .G AT scaffold14099 ScafM INDEL 0030.scaffold00117 677025 1 . C scaffold14099 ScafM INDEL 0030.scaffold00117 677026 1 . C scaffold14099 ScafM INDEL 0030.scaffold00117 677028 2 .. GA scaffold14099 ScafM SNP 0030.scaffold00117 677030 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 677092 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 677125 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 677140 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 677186 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 677253 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 677290 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 677310 1 T G scaffold14099 ScafM SNP 0030.scaffold00117 677345 1 G C scaffold14099 ScafM SNP 0030.scaffold00117 677362 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 677405 1 C T scaffold14099 ScafM INDEL 0030.scaffold00117 677425 3 ATA ... scaffold14099 ScafM INDEL 0030.scaffold00117 677445 2 .G CA scaffold14099 ScafM SNP 0030.scaffold00117 677472 1 G A scaffold14099 ScafM INDEL 0030.scaffold00117 677474 4 ACAA ...T scaffold14099 ScafM SNP 0030.scaffold00117 677480 2 CA GC scaffold14099 ScafM INDEL 0030.scaffold00117 677486 4 ACCA ...G scaffold14099 ScafM INDEL 0030.scaffold00117 677494 4 TCAC .... scaffold14099 ScafM SNP 0030.scaffold00117 677500 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 677502 2 AA CC scaffold14099 ScafM INDEL 0030.scaffold00117 677505 2 AG .. scaffold14099 ScafM SNP 0030.scaffold00117 677510 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 677512 1 T C scaffold14099 ScafM INDEL 0030.scaffold00117 677517 5 TTGAG ..... scaffold14099 ScafM INDEL 0030.scaffold00117 677523 2 GG .. scaffold14099 ScafM INDEL 0030.scaffold00117 677527 3 TTC ... scaffold14099 ScafM INDEL 0030.scaffold00117 677531 2 GT .. scaffold14099 ScafM INDEL 0030.scaffold00117 677534 4 GTGG .... scaffold14099 ScafM INDEL 0030.scaffold00117 677539 2 GG .. scaffold14099 ScafM INDEL 0030.scaffold00117 677542 3 GGT ... scaffold14099 ScafM INDEL 0030.scaffold00117 677553 19 AATGAATGAGTAAAAGAGG ................... scaffold14099 ScafM SNP 0030.scaffold00117 677604 1 G C scaffold14099 ReadM SNP 0030.scaffold00117 682626 1 A C - ReadM SNP 0030.scaffold00117 682654 1 A G - ScafM SNP 0030.scaffold00117 684629 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 684664 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 684695 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 685261 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685327 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 685341 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685394 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 685421 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685424 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 685469 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 685472 2 CC TT scaffold14099 ScafM INDEL 0030.scaffold00117 685585 1 T . scaffold14099 ScafM SNP 0030.scaffold00117 685588 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 685597 1 C G scaffold14099 ScafM INDEL 0030.scaffold00117 685633 4 ATAT .... scaffold14099 ScafM SNP 0030.scaffold00117 685651 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 685654 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 685676 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 685687 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685701 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 685720 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 685731 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 685733 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 685756 1 T C scaffold14099 ScafM INDEL 0030.scaffold00117 685781 1 A . scaffold14099 ScafM SNP 0030.scaffold00117 685814 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685816 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 685835 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 685842 1 C A scaffold14099 ScafM SNP 0030.scaffold00117 685845 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685848 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 685857 1 G A scaffold14099 ScafM INDEL 0030.scaffold00117 685874 47 AATATGAAAAAAAAAATCCAAAACAACCTTATATATTTAGATCGTTA ............................................... scaffold14099 ScafM SNP 0030.scaffold00117 685959 1 C A scaffold14099 ScafM INDEL 0030.scaffold00117 686000 5 ..... ATTAA scaffold14099 ScafM SNP 0030.scaffold00117 686004 2 CT TC scaffold14099 ScafM SNP 0030.scaffold00117 686023 1 A T scaffold14099 ScafM INDEL 0030.scaffold00117 687190 1 . A scaffold14099 ScafM INDEL 0030.scaffold00117 687191 8 ........ TATATTAT scaffold14099 ScafM SNP 0030.scaffold00117 687223 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 687253 1 T C scaffold14099 ScafM SNP 0030.scaffold00117 687259 1 G T scaffold14099 ScafM SNP 0030.scaffold00117 687269 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 687292 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 687418 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 687446 1 T G scaffold14099 ScafM SNP 0030.scaffold00117 687460 1 T G scaffold14099 ScafM SNP 0030.scaffold00117 687513 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 687540 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 687542 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 687587 1 C G scaffold14099 ScafM SNP 0030.scaffold00117 687610 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 687660 1 A G scaffold14099 ScafM SNP 0030.scaffold00117 687694 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 687698 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 687701 1 T G scaffold14099 ScafM INDEL 0030.scaffold00117 687709 1 . A scaffold14099 ScafM SNP 0030.scaffold00117 687740 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 687793 1 G A scaffold14099 ScafM SNP 0030.scaffold00117 687802 1 G C scaffold14099 ScafM SNP 0030.scaffold00117 688546 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 688553 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 688562 1 G A scaffold6167 ScafM SNP 0030.scaffold00117 688566 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 688576 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 688585 2 CA TC scaffold6167 ScafM SNP 0030.scaffold00117 688597 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 688614 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 688625 1 C A scaffold6167 ScafM SNP 0030.scaffold00117 688629 1 G A scaffold6167 ScafM INDEL 0030.scaffold00117 688651 2 AA .G scaffold6167 ScafM SNP 0030.scaffold00117 688685 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 688688 2 GG CT scaffold6167 ScafM SNP 0030.scaffold00117 688763 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 688765 3 AGA CAT scaffold6167 ScafM SNP 0030.scaffold00117 688769 2 GC TT scaffold6167 ScafM SNP 0030.scaffold00117 688774 1 A C scaffold6167 ScafM SNP 0030.scaffold00117 688779 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 688783 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 688789 1 A T scaffold6167 ScafM SNP 0030.scaffold00117 688797 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 688804 1 A G scaffold6167 ScafM SNP 0030.scaffold00117 688825 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 688831 2 GA TG scaffold6167 ScafM SNP 0030.scaffold00117 688842 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 688852 2 TG CA scaffold6167 ScafM SNP 0030.scaffold00117 688855 1 T C scaffold6167 ScafM INDEL 0030.scaffold00117 688866 1 C . scaffold6167 ScafM SNP 0030.scaffold00117 688874 2 GA TG scaffold6167 ScafM SNP 0030.scaffold00117 688904 1 C T scaffold6167 ScafM INDEL 0030.scaffold00117 688910 1 . A scaffold6167 ScafM SNP 0030.scaffold00117 688918 1 T A scaffold6167 ScafM SNP 0030.scaffold00117 688929 1 T G scaffold6167 ScafM SNP 0030.scaffold00117 688934 2 TA CG scaffold6167 ScafM SNP 0030.scaffold00117 688951 1 G C scaffold6167 ScafM SNP 0030.scaffold00117 688955 1 T C scaffold6167 ScafM SNP 0030.scaffold00117 688957 1 G C scaffold6167 ScafM INDEL 0030.scaffold00117 688967 1 C . scaffold6167 ScafM SNP 0030.scaffold00117 689272 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 689333 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 689377 1 A C scaffold14099 ScafM SNP 0030.scaffold00117 689437 1 T A scaffold14099 ScafM SNP 0030.scaffold00117 689439 1 A T scaffold14099 ScafM SNP 0030.scaffold00117 689472 1 C G scaffold14099 ScafM INDEL 0030.scaffold00117 689482 1 . A scaffold14099 ScafM INDEL 0030.scaffold00117 689492 2 GT .A scaffold14099 ScafM SNP 0030.scaffold00117 689496 1 T C scaffold14099 ScafM INDEL 0030.scaffold00117 689563 16 TAAATAAAATAAGTGA ................ scaffold14099 ScafM INDEL 0030.scaffold00117 689582 6 CATATA ...... scaffold14099 ScafM SNP 0030.scaffold00117 689660 1 C T scaffold14099 ScafM SNP 0030.scaffold00117 689704 1 G A scaffold14099 ScafM INDEL 0030.scaffold00117 695189 10 GTAAATACTA .......... scaffold12077 ScafM SNP 0030.scaffold00117 695375 1 A T scaffold12077 Both SNP 0030.scaffold00117 695559 1 T C scaffold12077 Both SNP 0030.scaffold00117 695594 1 T A scaffold12077 ScafM INDEL 0030.scaffold00117 695845 8 TCAGTTTG ........ scaffold12077 ScafM INDEL 0030.scaffold00117 695874 5 ..... TTCAG scaffold12077 Both SNP 0030.scaffold00117 695927 1 T C scaffold12077 Both SNP 0030.scaffold00117 695960 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 695998 4 TCCA .... scaffold12077 ScafM INDEL 0030.scaffold00117 696004 16 TAAGTAGGTGAGGCTT ................ scaffold12077 ScafM INDEL 0030.scaffold00117 696021 4 TCCT .... scaffold12077 ScafM SNP 0030.scaffold00117 696063 1 G A scaffold12077 Both SNP 0030.scaffold00117 696078 1 C T scaffold12077 Both SNP 0030.scaffold00117 696101 1 T A scaffold12077 Both SNP 0030.scaffold00117 696167 1 A C scaffold12077 Both SNP 0030.scaffold00117 696175 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 696343 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 696359 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 696365 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 696377 1 T . scaffold12077 ScafM SNP 0030.scaffold00117 696391 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 696504 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 696770 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 696821 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 696970 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 696982 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 696997 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 697001 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 698095 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 698111 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 698159 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 698182 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 698200 1 G C scaffold12077 ScafM INDEL 0030.scaffold00117 698258 8 AGTGAAGG ........ scaffold12077 ScafM INDEL 0030.scaffold00117 698283 3 AAA ... scaffold12077 ScafM SNP 0030.scaffold00117 698289 1 A G scaffold12077 ScafM INDEL 0030.scaffold00117 698291 3 ... TCG scaffold12077 ScafM SNP 0030.scaffold00117 698313 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 698326 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 698359 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 698363 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 698366 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 698379 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 698392 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 698405 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 698434 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 698467 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 698474 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 698502 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 698539 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 698559 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 698562 1 . G scaffold12077 ScafM INDEL 0030.scaffold00117 698565 1 G . scaffold12077 ScafM SNP 0030.scaffold00117 698585 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 698602 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 698605 1 G C scaffold12077 ScafM INDEL 0030.scaffold00117 698615 1 T . scaffold12077 ScafM SNP 0030.scaffold00117 698631 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 698640 1 A G scaffold12077 ReadM SNP 0030.scaffold00117 699474 1 C T - ReadM SNP 0030.scaffold00117 699479 1 A G - ScafM SNP 0030.scaffold00117 700042 1 T C scaffold12077 ReadM SNP 0030.scaffold00117 704553 1 A G - ReadM SNP 0030.scaffold00117 704560 1 G A - ReadM SNP 0030.scaffold00117 705057 1 G A - ReadM SNP 0030.scaffold00117 705109 1 A G - ReadM SNP 0030.scaffold00117 706166 1 C T - ScafM SNP 0030.scaffold00117 706335 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 706344 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 706346 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 706375 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 706781 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 706807 1 A T scaffold12077 ScafM INDEL 0030.scaffold00117 706808 1 . G scaffold12077 ScafM SNP 0030.scaffold00117 706812 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 706980 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 710518 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 710543 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 710550 3 TAC ... scaffold12077 ScafM SNP 0030.scaffold00117 710561 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 710565 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 710567 2 GT AC scaffold12077 ScafM SNP 0030.scaffold00117 710585 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 710603 1 A G scaffold12077 ScafM INDEL 0030.scaffold00117 710617 2 .. CT scaffold12077 ScafM INDEL 0030.scaffold00117 710618 7 ....... AAGGACC scaffold12077 ScafM SNP 0030.scaffold00117 710635 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 710657 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 710674 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 710704 1 C G scaffold12077 ScafM INDEL 0030.scaffold00117 710717 2 TC .. scaffold12077 ScafM INDEL 0030.scaffold00117 710721 1 G . scaffold12077 ScafM INDEL 0030.scaffold00117 710723 1 G . scaffold12077 ScafM SNP 0030.scaffold00117 710726 3 AGG TCA scaffold12077 ScafM SNP 0030.scaffold00117 710733 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 710735 6 AAAAAA .....G scaffold12077 ScafM INDEL 0030.scaffold00117 710743 1 A . scaffold12077 ScafM SNP 0030.scaffold00117 710747 2 CA TC scaffold12077 ScafM SNP 0030.scaffold00117 710751 3 AAA GTG scaffold12077 ScafM INDEL 0030.scaffold00117 710755 7 CACAAAT ....... scaffold12077 ScafM SNP 0030.scaffold00117 710764 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 710789 1 C G scaffold12077 ScafM SNP 0030.scaffold00117 710820 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 710828 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 710835 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 710838 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 710893 1 . A scaffold12077 ScafM SNP 0030.scaffold00117 710904 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 712048 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 712059 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 712073 2 TT AA scaffold12077 ScafM SNP 0030.scaffold00117 712079 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 712097 3 ... AAT scaffold12077 ScafM SNP 0030.scaffold00117 712106 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 712112 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 712148 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 712150 2 GA CG scaffold12077 ScafM SNP 0030.scaffold00117 712158 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 712165 1 T A scaffold12077 ScafM INDEL 0030.scaffold00117 712171 2 .. CT scaffold12077 ScafM SNP 0030.scaffold00117 712215 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 712223 1 C A scaffold12077 Both SNP 0030.scaffold00117 712257 1 G A scaffold12077 Both SNP 0030.scaffold00117 712287 1 T A scaffold12077 Both SNP 0030.scaffold00117 712323 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 712378 2 CC AG scaffold12077 ScafM SNP 0030.scaffold00117 712401 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 712406 1 C A scaffold12077 Both SNP 0030.scaffold00117 712431 1 C G scaffold12077 Both SNP 0030.scaffold00117 712627 1 G T scaffold12077 Both SNP 0030.scaffold00117 712795 1 C T scaffold12077 Both SNP 0030.scaffold00117 712806 1 A G scaffold12077 Both SNP 0030.scaffold00117 712829 1 A T scaffold12077 Both SNP 0030.scaffold00117 712930 1 C T scaffold12077 Both SNP 0030.scaffold00117 713224 1 T A scaffold12077 Both SNP 0030.scaffold00117 713276 1 G A scaffold12077 Both SNP 0030.scaffold00117 713371 1 T C scaffold12077 Both SNP 0030.scaffold00117 713400 1 G A scaffold12077 Both INDEL 0030.scaffold00117 713487 2 AA .. scaffold12077 ScafM SNP 0030.scaffold00117 713490 1 G C scaffold12077 ScafM INDEL 0030.scaffold00117 713575 1 A . scaffold12077 ScafM INDEL 0030.scaffold00117 713581 1 C . scaffold12077 ScafM INDEL 0030.scaffold00117 713591 4 AGAA .... scaffold12077 ScafM INDEL 0030.scaffold00117 713596 4 TCCA .... scaffold12077 ScafM INDEL 0030.scaffold00117 713601 3 TAA ... scaffold12077 ScafM SNP 0030.scaffold00117 713613 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 713649 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 713663 8 CTATTAGC ........ scaffold12077 Both SNP 0030.scaffold00117 713816 1 T A scaffold12077 Both SNP 0030.scaffold00117 713847 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 714008 3 ... AAT scaffold12077 ScafM SNP 0030.scaffold00117 714014 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 714026 1 A C scaffold12077 ReadM SNP 0030.scaffold00117 714282 1 A G - Both SNP 0030.scaffold00117 714392 1 T C scaffold12077 Both SNP 0030.scaffold00117 714473 1 A G scaffold12077 Both SNP 0030.scaffold00117 714497 1 A T scaffold12077 Both INDEL 0030.scaffold00117 714610 1 A . scaffold12077 ScafM INDEL 0030.scaffold00117 714629 5 TAGAC ..... scaffold12077 Both SNP 0030.scaffold00117 714665 1 A T scaffold12077 Both SNP 0030.scaffold00117 714669 1 T C scaffold12077 Both SNP 0030.scaffold00117 714817 1 G T scaffold12077 Both SNP 0030.scaffold00117 714831 1 G C scaffold12077 Both SNP 0030.scaffold00117 714972 1 T A scaffold12077 Both SNP 0030.scaffold00117 714994 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 715046 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 715050 3 GGG AAA scaffold12077 Both SNP 0030.scaffold00117 715083 1 T C scaffold12077 Both SNP 0030.scaffold00117 715221 1 A G scaffold12077 Both SNP 0030.scaffold00117 715239 1 A T scaffold12077 Both SNP 0030.scaffold00117 715363 1 G A scaffold12077 Both SNP 0030.scaffold00117 715376 1 G A scaffold12077 Both SNP 0030.scaffold00117 715380 1 A G scaffold12077 Both SNP 0030.scaffold00117 715465 1 T A scaffold12077 Both SNP 0030.scaffold00117 715510 1 C A scaffold12077 Both SNP 0030.scaffold00117 715622 1 C T scaffold12077 Both SNP 0030.scaffold00117 715625 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 715719 1 G A - ReadM SNP 0030.scaffold00117 715865 1 A G - ReadM SNP 0030.scaffold00117 715918 1 C T - Both SNP 0030.scaffold00117 715940 1 G A scaffold12077 Both INDEL 0030.scaffold00117 715990 1 A . scaffold12077 Both SNP 0030.scaffold00117 716065 1 G T scaffold12077 Both SNP 0030.scaffold00117 716088 1 G A scaffold12077 Both SNP 0030.scaffold00117 716119 1 T G scaffold12077 Both SNP 0030.scaffold00117 716215 1 T A scaffold12077 Both SNP 0030.scaffold00117 716223 1 A C scaffold12077 Both SNP 0030.scaffold00117 716328 1 A G scaffold12077 Both SNP 0030.scaffold00117 716406 1 A C scaffold12077 ReadM SNP 0030.scaffold00117 716468 1 A G - ReadM SNP 0030.scaffold00117 716479 1 A G - ReadM SNP 0030.scaffold00117 716515 1 T G - ReadM SNP 0030.scaffold00117 716577 1 T A - ReadM SNP 0030.scaffold00117 716628 1 G T - ReadM SNP 0030.scaffold00117 716634 1 A G - ReadM SNP 0030.scaffold00117 716668 1 T C - Both SNP 0030.scaffold00117 716683 1 T A scaffold12077 Both INDEL 0030.scaffold00117 716751 1 T . scaffold12077 ScafM SNP 0030.scaffold00117 716820 2 CT AC scaffold12077 Both SNP 0030.scaffold00117 716961 1 A G scaffold12077 Both INDEL 0030.scaffold00117 716975 1 G . scaffold12077 ReadM SNP 0030.scaffold00117 716991 1 T G - ReadM SNP 0030.scaffold00117 717055 1 C A - ReadM SNP 0030.scaffold00117 717058 1 T C - Both SNP 0030.scaffold00117 717140 1 A C scaffold12077 Both SNP 0030.scaffold00117 717168 1 G A scaffold12077 Both INDEL 0030.scaffold00117 717188 1 T . scaffold12077 Both SNP 0030.scaffold00117 717280 1 T C scaffold12077 Both SNP 0030.scaffold00117 717381 1 A G scaffold12077 Both SNP 0030.scaffold00117 717439 1 C A scaffold12077 Both SNP 0030.scaffold00117 717476 1 G T scaffold12077 Both SNP 0030.scaffold00117 717610 1 A T scaffold12077 Both SNP 0030.scaffold00117 717653 1 A G scaffold12077 Both SNP 0030.scaffold00117 717666 1 A T scaffold12077 Both SNP 0030.scaffold00117 717671 1 T A scaffold12077 Both SNP 0030.scaffold00117 718117 1 G T scaffold12077 Both SNP 0030.scaffold00117 718233 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 718281 7 ATGTATT ....... scaffold12077 Both INDEL 0030.scaffold00117 718435 2 .. AG scaffold12077 Both SNP 0030.scaffold00117 718447 1 G A scaffold12077 Both SNP 0030.scaffold00117 718584 1 A T scaffold12077 Both SNP 0030.scaffold00117 718599 1 A C scaffold12077 ReadM SNP 0030.scaffold00117 718738 1 T A - ReadM SNP 0030.scaffold00117 718814 1 T C - ReadM SNP 0030.scaffold00117 718825 1 C A - ReadM SNP 0030.scaffold00117 718852 1 G A - ReadM SNP 0030.scaffold00117 718968 1 G T - Both INDEL 0030.scaffold00117 719136 1 T . scaffold12077 ReadM SNP 0030.scaffold00117 719188 1 C T - Both SNP 0030.scaffold00117 719283 1 G C scaffold12077 Both SNP 0030.scaffold00117 719381 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 719393 1 A G - ScafM SNP 0030.scaffold00117 719417 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 719493 6 CGGTAA ...... scaffold12077 Both SNP 0030.scaffold00117 719741 1 G T scaffold12077 Both SNP 0030.scaffold00117 719823 1 A T scaffold12077 Both INDEL 0030.scaffold00117 719874 1 . A scaffold12077 Both SNP 0030.scaffold00117 719894 1 C T scaffold12077 Both INDEL 0030.scaffold00117 720006 1 A . scaffold12077 ScafM INDEL 0030.scaffold00117 720027 1 . T scaffold12077 Both SNP 0030.scaffold00117 720041 1 T A scaffold12077 Both SNP 0030.scaffold00117 720193 1 C A scaffold12077 Both SNP 0030.scaffold00117 720250 1 A G scaffold12077 Both SNP 0030.scaffold00117 720254 1 A G scaffold12077 Both SNP 0030.scaffold00117 720347 1 G A scaffold12077 Both SNP 0030.scaffold00117 720364 1 A T scaffold12077 Both SNP 0030.scaffold00117 720449 1 T G scaffold12077 Both SNP 0030.scaffold00117 720522 1 T C scaffold12077 Both SNP 0030.scaffold00117 720557 1 G A scaffold12077 Both SNP 0030.scaffold00117 720563 1 A G scaffold12077 Both SNP 0030.scaffold00117 720574 1 T C scaffold12077 Both SNP 0030.scaffold00117 720732 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 720783 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 720806 4 CAAA .... scaffold12077 Both SNP 0030.scaffold00117 720929 1 C A scaffold12077 ScafM INDEL 0030.scaffold00117 721007 2 AA .. scaffold12077 Both SNP 0030.scaffold00117 721016 1 C A scaffold12077 Both SNP 0030.scaffold00117 721044 1 T C scaffold12077 Both SNP 0030.scaffold00117 721158 1 A T scaffold12077 ScafM INDEL 0030.scaffold00117 721199 1 C . scaffold12077 ScafM SNP 0030.scaffold00117 721211 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 721216 2 TT .. scaffold12077 ScafM INDEL 0030.scaffold00117 721219 7 GGTGTGG ....... scaffold12077 ScafM SNP 0030.scaffold00117 721227 1 T A scaffold12077 Both SNP 0030.scaffold00117 721267 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 721358 4 AAAA .... scaffold12077 Both SNP 0030.scaffold00117 721415 1 G T scaffold12077 Both SNP 0030.scaffold00117 721520 1 C T scaffold12077 Both SNP 0030.scaffold00117 721523 1 C T scaffold12077 Both SNP 0030.scaffold00117 721530 1 T G scaffold12077 Both SNP 0030.scaffold00117 721564 1 G C scaffold12077 ScafM INDEL 0030.scaffold00117 721651 3 ... AAG scaffold12077 ScafM SNP 0030.scaffold00117 721658 1 T C scaffold12077 Both INDEL 0030.scaffold00117 721729 1 . G scaffold12077 Both SNP 0030.scaffold00117 721803 1 G T scaffold12077 Both INDEL 0030.scaffold00117 721821 1 C . scaffold12077 Both SNP 0030.scaffold00117 721842 1 T A scaffold12077 Both SNP 0030.scaffold00117 721874 1 A G scaffold12077 Both INDEL 0030.scaffold00117 721965 1 T . scaffold12077 Both SNP 0030.scaffold00117 722325 1 C T scaffold12077 Both SNP 0030.scaffold00117 722390 1 A G scaffold12077 Both SNP 0030.scaffold00117 722506 1 C T scaffold12077 Both INDEL 0030.scaffold00117 722550 2 AC .. scaffold12077 ScafM SNP 0030.scaffold00117 722589 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 722599 1 G T scaffold12077 Both SNP 0030.scaffold00117 722631 1 A G scaffold12077 Both SNP 0030.scaffold00117 722638 1 A G scaffold12077 Both SNP 0030.scaffold00117 722647 1 G A scaffold12077 Both SNP 0030.scaffold00117 722753 1 G A scaffold12077 Both SNP 0030.scaffold00117 722788 1 A T scaffold12077 Both SNP 0030.scaffold00117 722879 1 C A scaffold12077 Both SNP 0030.scaffold00117 723082 1 C G scaffold12077 Both SNP 0030.scaffold00117 723150 1 G T scaffold12077 Both SNP 0030.scaffold00117 723294 1 T C scaffold12077 Both SNP 0030.scaffold00117 723361 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 723375 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 723392 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 723394 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 723413 2 TG AT scaffold12077 ScafM INDEL 0030.scaffold00117 723641 1 . G scaffold12077 ScafM INDEL 0030.scaffold00117 723647 1 . G scaffold12077 ScafM SNP 0030.scaffold00117 723653 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 723667 2 AA .. scaffold12077 ScafM SNP 0030.scaffold00117 723695 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 723711 2 TA CG scaffold12077 Both SNP 0030.scaffold00117 723775 1 A G scaffold12077 Both SNP 0030.scaffold00117 723788 1 A T scaffold12077 Both SNP 0030.scaffold00117 723909 1 G A scaffold12077 Both SNP 0030.scaffold00117 723927 1 T C scaffold12077 Both SNP 0030.scaffold00117 724065 1 G A scaffold12077 Both SNP 0030.scaffold00117 724095 1 C T scaffold12077 Both SNP 0030.scaffold00117 724747 2 CC AA scaffold12077 Both SNP 0030.scaffold00117 724758 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 724958 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 725049 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 725066 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 725110 1 T G scaffold12077 ScafM INDEL 0030.scaffold00117 725355 12 ............ TGTATGTATGTA scaffold12077 ScafM INDEL 0030.scaffold00117 725379 2 AC .. scaffold12077 ScafM SNP 0030.scaffold00117 725481 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 725492 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 725550 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 725617 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 725648 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 725816 1 G A scaffold12077 Both SNP 0030.scaffold00117 725895 1 C G scaffold12077 Both SNP 0030.scaffold00117 725959 1 G C scaffold12077 Both SNP 0030.scaffold00117 726008 1 G A scaffold12077 Both SNP 0030.scaffold00117 726106 1 T C scaffold12077 Both SNP 0030.scaffold00117 726342 1 C A scaffold12077 Both SNP 0030.scaffold00117 726352 1 G A scaffold12077 Both SNP 0030.scaffold00117 726387 1 G A scaffold12077 Both INDEL 0030.scaffold00117 726452 1 . A scaffold12077 Both SNP 0030.scaffold00117 726512 1 C T scaffold12077 Both SNP 0030.scaffold00117 726616 1 G A scaffold12077 Both SNP 0030.scaffold00117 726701 1 T G scaffold12077 Both SNP 0030.scaffold00117 726716 1 A T scaffold12077 Both SNP 0030.scaffold00117 726747 1 G C scaffold12077 Both SNP 0030.scaffold00117 726937 1 C G scaffold12077 Both SNP 0030.scaffold00117 726984 1 G A scaffold12077 ReadM SNP 0030.scaffold00117 727142 1 C A - ReadM SNP 0030.scaffold00117 727193 1 C T - ReadM SNP 0030.scaffold00117 727197 1 C T - Both SNP 0030.scaffold00117 727243 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 727344 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 727358 2 GA .C scaffold12077 ScafM SNP 0030.scaffold00117 727371 1 C G scaffold12077 ScafM SNP 0030.scaffold00117 727399 1 A T scaffold12077 Both SNP 0030.scaffold00117 727473 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 727519 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 727563 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 727572 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 727632 3 ... AAT scaffold12077 ScafM SNP 0030.scaffold00117 727646 2 CA TG scaffold12077 Both SNP 0030.scaffold00117 727722 1 T C scaffold12077 Both SNP 0030.scaffold00117 727819 1 A T scaffold12077 Both SNP 0030.scaffold00117 727898 1 C A scaffold12077 Both SNP 0030.scaffold00117 728082 1 T G scaffold12077 Both SNP 0030.scaffold00117 728175 1 T G scaffold12077 ReadM SNP 0030.scaffold00117 728262 1 T C - ReadM SNP 0030.scaffold00117 728333 1 A G - ReadM SNP 0030.scaffold00117 728353 1 T G - ReadM SNP 0030.scaffold00117 728370 1 G C - Both SNP 0030.scaffold00117 728428 1 A G scaffold12077 Both SNP 0030.scaffold00117 728472 1 G C scaffold12077 Both SNP 0030.scaffold00117 728512 1 C T scaffold12077 Both SNP 0030.scaffold00117 728515 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 728555 1 C A scaffold12077 ScafM INDEL 0030.scaffold00117 728574 3 ... TAC scaffold12077 ScafM SNP 0030.scaffold00117 728595 1 C A scaffold12077 Both INDEL 0030.scaffold00117 728607 1 T . scaffold12077 Both SNP 0030.scaffold00117 728653 1 T C scaffold12077 Both SNP 0030.scaffold00117 728678 1 A G scaffold12077 Both SNP 0030.scaffold00117 729032 1 A G scaffold12077 Both SNP 0030.scaffold00117 729097 1 A T scaffold12077 Both SNP 0030.scaffold00117 729137 2 AT GG scaffold12077 Both INDEL 0030.scaffold00117 729296 1 . A scaffold12077 Both SNP 0030.scaffold00117 729326 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 729398 4 .... AAAA scaffold12077 ScafM SNP 0030.scaffold00117 729437 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 729440 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 729468 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 729471 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 729475 2 AG .T scaffold12077 ScafM INDEL 0030.scaffold00117 729478 4 AAAA .... scaffold12077 ReadM SNP 0030.scaffold00117 729513 1 G T - Both SNP 0030.scaffold00117 729547 1 C T scaffold12077 Both SNP 0030.scaffold00117 729636 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 729651 6 CAACAG ...... scaffold12077 ScafM INDEL 0030.scaffold00117 729681 1 A . scaffold12077 ScafM SNP 0030.scaffold00117 729683 1 A G scaffold12077 Both SNP 0030.scaffold00117 729689 1 G T scaffold12077 Both SNP 0030.scaffold00117 729791 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 729796 1 G A - ScafM SNP 0030.scaffold00117 729952 1 G A scaffold12077 ScafM INDEL 0030.scaffold00117 729993 1 T . scaffold12077 ScafM INDEL 0030.scaffold00117 729995 1 . A scaffold12077 ScafM SNP 0030.scaffold00117 729997 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 730171 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 730200 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 730206 1 T A scaffold12077 ScafM INDEL 0030.scaffold00117 730237 6 ...... AGAGAG scaffold12077 ScafM INDEL 0030.scaffold00117 730277 6 ...... TAGACT scaffold12077 ScafM INDEL 0030.scaffold00117 730286 1 . A scaffold12077 ScafM INDEL 0030.scaffold00117 730312 12 GCAGGTGCAGGT ............ scaffold12077 ScafM SNP 0030.scaffold00117 730449 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 730466 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 730505 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 730527 1 A . scaffold12077 ReadM SNP 0030.scaffold00117 731121 1 A G - ReadM SNP 0030.scaffold00117 731468 1 A G - ReadM SNP 0030.scaffold00117 731543 1 T C - ReadM SNP 0030.scaffold00117 731561 1 T C - ReadM SNP 0030.scaffold00117 732124 1 G T - ReadM SNP 0030.scaffold00117 732215 1 G A - ReadM SNP 0030.scaffold00117 732456 1 A C - ReadM SNP 0030.scaffold00117 732585 1 A C - ReadM SNP 0030.scaffold00117 732616 1 T G - ReadM SNP 0030.scaffold00117 732634 1 G A - ReadM SNP 0030.scaffold00117 732813 1 G A - ReadM SNP 0030.scaffold00117 732875 1 T C - ReadM SNP 0030.scaffold00117 732966 1 G A - ReadM INDEL 0030.scaffold00117 733064 2 CT .. - ReadM SNP 0030.scaffold00117 733311 1 A G - ReadM SNP 0030.scaffold00117 733386 1 A G - ReadM SNP 0030.scaffold00117 733862 1 G C - ReadM SNP 0030.scaffold00117 733885 1 A C - ScafM SNP 0030.scaffold00117 734019 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 734035 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 734134 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 734291 1 C A - ReadM SNP 0030.scaffold00117 734450 1 G T - Both SNP 0030.scaffold00117 734492 1 T C scaffold12077 Both SNP 0030.scaffold00117 734536 1 G T scaffold12077 Both SNP 0030.scaffold00117 734541 1 G A scaffold12077 Both SNP 0030.scaffold00117 734649 1 A T scaffold12077 ReadM SNP 0030.scaffold00117 734746 1 T C - ReadM SNP 0030.scaffold00117 734753 1 G A - ReadM SNP 0030.scaffold00117 734902 1 T C - ReadM INDEL 0030.scaffold00117 734954 2 GT .. - Both SNP 0030.scaffold00117 735068 1 C T scaffold12077 Both SNP 0030.scaffold00117 735198 1 G A scaffold12077 ReadM SNP 0030.scaffold00117 735453 1 C A - ReadM SNP 0030.scaffold00117 735686 1 C T - ReadM SNP 0030.scaffold00117 735757 1 T C - ReadM SNP 0030.scaffold00117 735785 1 A G - ReadM SNP 0030.scaffold00117 735881 1 G A - ReadM SNP 0030.scaffold00117 735956 1 C T - ReadM SNP 0030.scaffold00117 736030 1 C G - ReadM SNP 0030.scaffold00117 736212 1 C T - ReadM SNP 0030.scaffold00117 736397 1 C A - ReadM SNP 0030.scaffold00117 736452 1 T G - ReadM SNP 0030.scaffold00117 736523 1 A T - ReadM SNP 0030.scaffold00117 736728 1 C T - ReadM SNP 0030.scaffold00117 736904 1 A G - ReadM SNP 0030.scaffold00117 736906 1 A G - ReadM SNP 0030.scaffold00117 737292 1 C G - ReadM SNP 0030.scaffold00117 737303 1 C G - ReadM SNP 0030.scaffold00117 737512 1 G A - ReadM SNP 0030.scaffold00117 737566 1 A T - ReadM SNP 0030.scaffold00117 737648 1 T A - ReadM SNP 0030.scaffold00117 737694 1 G A - ReadM SNP 0030.scaffold00117 737794 1 T C - ReadM SNP 0030.scaffold00117 738332 1 C A - ReadM SNP 0030.scaffold00117 738340 1 C G - ReadM SNP 0030.scaffold00117 738443 1 A T - Both INDEL 0030.scaffold00117 738743 1 . T scaffold12077 Both SNP 0030.scaffold00117 738810 1 G A scaffold12077 Both INDEL 0030.scaffold00117 738835 2 AG .. scaffold12077 Both INDEL 0030.scaffold00117 738911 1 T . scaffold12077 Both SNP 0030.scaffold00117 738951 1 T C scaffold12077 Both SNP 0030.scaffold00117 739024 1 A G scaffold12077 Both SNP 0030.scaffold00117 739026 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 739137 2 AA TT scaffold12077 ScafM SNP 0030.scaffold00117 739287 1 T A scaffold12077 ScafM INDEL 0030.scaffold00117 739316 3 TAC ... scaffold12077 Both SNP 0030.scaffold00117 739490 1 T C scaffold12077 Both SNP 0030.scaffold00117 739533 1 G A scaffold12077 Both SNP 0030.scaffold00117 739670 1 A G scaffold12077 Both SNP 0030.scaffold00117 739749 1 G A scaffold12077 Both SNP 0030.scaffold00117 739782 1 G T scaffold12077 Both SNP 0030.scaffold00117 739845 1 A C scaffold12077 Both SNP 0030.scaffold00117 739848 1 G A scaffold12077 ReadM SNP 0030.scaffold00117 740131 1 C A - ReadM SNP 0030.scaffold00117 740199 1 G C - ReadM SNP 0030.scaffold00117 740264 1 C A - ReadM SNP 0030.scaffold00117 740464 1 G A - ReadM SNP 0030.scaffold00117 740609 1 G A - ReadM SNP 0030.scaffold00117 740707 1 G A - ReadM SNP 0030.scaffold00117 740823 1 T C - ReadM SNP 0030.scaffold00117 740896 1 G A - ReadM SNP 0030.scaffold00117 741208 1 A G - ReadM SNP 0030.scaffold00117 741237 1 G T - ReadM SNP 0030.scaffold00117 741386 1 A C - ReadM SNP 0030.scaffold00117 741407 1 C T - ReadM SNP 0030.scaffold00117 741855 1 T C - ReadM SNP 0030.scaffold00117 742452 1 A G - ReadM SNP 0030.scaffold00117 742473 1 G A - ReadM SNP 0030.scaffold00117 742505 1 C T - ReadM SNP 0030.scaffold00117 742581 1 A C - ReadM SNP 0030.scaffold00117 742929 1 C A - ReadM SNP 0030.scaffold00117 743064 1 C G - ReadM SNP 0030.scaffold00117 743089 1 A G - Both SNP 0030.scaffold00117 743238 1 G T scaffold12077 ReadM SNP 0030.scaffold00117 743464 1 A G - ReadM SNP 0030.scaffold00117 743488 1 T G - ReadM SNP 0030.scaffold00117 743501 1 C T - ReadM SNP 0030.scaffold00117 743945 1 G A - ReadM SNP 0030.scaffold00117 743978 1 T G - ReadM SNP 0030.scaffold00117 743981 1 C A - ReadM SNP 0030.scaffold00117 753716 1 G A - ReadM SNP 0030.scaffold00117 753747 1 A G - ReadM SNP 0030.scaffold00117 753806 1 A T - ReadM SNP 0030.scaffold00117 753880 1 A C - ReadM SNP 0030.scaffold00117 754095 1 T A - ReadM SNP 0030.scaffold00117 754155 1 C T - ReadM SNP 0030.scaffold00117 754168 1 T A - Both SNP 0030.scaffold00117 754384 1 T G scaffold12077 ReadM INDEL 0030.scaffold00117 754678 1 A . - ReadM SNP 0030.scaffold00117 754811 1 C G - ReadM SNP 0030.scaffold00117 754844 1 C A - ReadM SNP 0030.scaffold00117 754853 1 G T - ReadM SNP 0030.scaffold00117 754861 1 A T - Both SNP 0030.scaffold00117 754904 1 C T scaffold12077 Both SNP 0030.scaffold00117 754961 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 755281 1 A G - ScafM SNP 0030.scaffold00117 756114 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 756742 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 756779 2 AG TT scaffold12077 ReadM SNP 0030.scaffold00117 757470 1 A G - ReadM SNP 0030.scaffold00117 757818 1 A G - ReadM SNP 0030.scaffold00117 757841 1 C G - ScafM INDEL 0030.scaffold00117 758290 1 . A scaffold12077 ScafM INDEL 0030.scaffold00117 758326 3 ... AAA scaffold12077 ScafM SNP 0030.scaffold00117 758634 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 758702 1 T C scaffold12077 Both SNP 0030.scaffold00117 758759 1 G A scaffold12077 ReadM SNP 0030.scaffold00117 758878 1 C T - ReadM SNP 0030.scaffold00117 759053 1 C A - ReadM INDEL 0030.scaffold00117 759094 1 . A - ReadM INDEL 0030.scaffold00117 759095 1 . G - ReadM SNP 0030.scaffold00117 759168 1 A G - ReadM INDEL 0030.scaffold00117 759180 1 . C - ReadM SNP 0030.scaffold00117 759209 1 G C - ReadM SNP 0030.scaffold00117 759261 1 C G - ReadM INDEL 0030.scaffold00117 759318 1 . T - Both SNP 0030.scaffold00117 759639 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 759922 1 T C scaffold12077 Both SNP 0030.scaffold00117 759942 1 G A scaffold12077 Both SNP 0030.scaffold00117 759989 1 T G scaffold12077 Both SNP 0030.scaffold00117 760081 1 G A scaffold12077 Both SNP 0030.scaffold00117 760209 1 A T scaffold12077 Both SNP 0030.scaffold00117 760232 1 C T scaffold12077 Both SNP 0030.scaffold00117 760492 1 T G scaffold12077 Both SNP 0030.scaffold00117 760534 1 A G scaffold12077 Both SNP 0030.scaffold00117 760577 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 760588 1 T C - ReadM SNP 0030.scaffold00117 760648 1 T C - ReadM SNP 0030.scaffold00117 760702 1 T C - Both SNP 0030.scaffold00117 760737 1 C T scaffold12077 Both SNP 0030.scaffold00117 760825 1 G A scaffold12077 Both SNP 0030.scaffold00117 760993 1 G A scaffold12077 Both SNP 0030.scaffold00117 761270 1 C T scaffold12077 Both SNP 0030.scaffold00117 761327 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 761453 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 761677 1 C T scaffold12077 Both SNP 0030.scaffold00117 761797 1 A T scaffold12077 Both INDEL 0030.scaffold00117 761984 1 A . scaffold12077 Both SNP 0030.scaffold00117 762072 1 T C scaffold12077 Both SNP 0030.scaffold00117 762236 1 T A scaffold12077 Both SNP 0030.scaffold00117 762396 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 762625 1 A C scaffold12077 ScafM SNP 0030.scaffold00117 762710 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 762747 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 763002 2 TG .. scaffold12077 ScafM SNP 0030.scaffold00117 763094 1 G C scaffold12077 ScafM INDEL 0030.scaffold00117 763189 1 . A scaffold12077 ReadM SNP 0030.scaffold00117 763238 1 A G - Both SNP 0030.scaffold00117 763417 1 G A scaffold12077 ReadM SNP 0030.scaffold00117 763742 1 A C - ReadM SNP 0030.scaffold00117 763765 1 A C - ReadM SNP 0030.scaffold00117 763798 1 T C - ReadM SNP 0030.scaffold00117 763847 1 T C - ReadM SNP 0030.scaffold00117 763885 1 C T - Both INDEL 0030.scaffold00117 763907 2 AA .. scaffold12077 Both INDEL 0030.scaffold00117 763965 1 . A scaffold12077 ScafM SNP 0030.scaffold00117 763973 1 T C scaffold12077 ReadM SNP 0030.scaffold00117 764177 1 A T - ReadM SNP 0030.scaffold00117 764186 2 TT GA - ReadM INDEL 0030.scaffold00117 764265 1 A . - Both SNP 0030.scaffold00117 764425 1 G T scaffold12077 Both SNP 0030.scaffold00117 764473 1 G A scaffold12077 Both SNP 0030.scaffold00117 764506 1 G T scaffold12077 Both SNP 0030.scaffold00117 764706 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 764738 8 AATTGTTA ........ scaffold12077 Both SNP 0030.scaffold00117 764755 1 G A scaffold12077 Both SNP 0030.scaffold00117 764880 1 A G scaffold12077 ScafM INDEL 0030.scaffold00117 764903 5 AGATG ..... scaffold12077 ScafM SNP 0030.scaffold00117 764927 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 764931 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 764953 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 764955 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 764967 1 C T scaffold12077 Both SNP 0030.scaffold00117 765003 1 A G scaffold12077 Both SNP 0030.scaffold00117 765020 1 G A scaffold12077 Both SNP 0030.scaffold00117 765095 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 765127 7 AGTTTGC ....... scaffold12077 ScafM SNP 0030.scaffold00117 765149 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 765157 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 765178 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 765180 1 T G scaffold12077 ScafM INDEL 0030.scaffold00117 765201 1 A . scaffold12077 ScafM SNP 0030.scaffold00117 765203 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 765225 1 C A scaffold12077 ScafM SNP 0030.scaffold00117 765236 1 T C scaffold12077 ScafM INDEL 0030.scaffold00117 765277 1 A . scaffold12077 ScafM SNP 0030.scaffold00117 765289 1 C A scaffold12077 ScafM INDEL 0030.scaffold00117 765293 8 TTCAACAG ........ scaffold12077 ScafM SNP 0030.scaffold00117 765321 1 G C scaffold12077 Both SNP 0030.scaffold00117 765415 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 765459 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 765462 6 ATAATT ...... scaffold12077 ReadM SNP 0030.scaffold00117 765527 1 C T - ReadM SNP 0030.scaffold00117 765547 1 G A - ReadM INDEL 0030.scaffold00117 765566 1 C . - ReadM SNP 0030.scaffold00117 765658 1 A G - ReadM SNP 0030.scaffold00117 765674 1 A G - ReadM SNP 0030.scaffold00117 765947 1 T A - ReadM INDEL 0030.scaffold00117 766067 1 A . - ReadM SNP 0030.scaffold00117 766117 1 T A - ReadM SNP 0030.scaffold00117 766329 1 G C - ReadM SNP 0030.scaffold00117 766365 1 C T - ReadM SNP 0030.scaffold00117 767562 1 C A - ReadM SNP 0030.scaffold00117 767583 1 G A - ScafM INDEL 0030.scaffold00117 768741 2 TG .. scaffold12077 ScafM SNP 0030.scaffold00117 768749 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 768759 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 768776 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 768780 2 CG TC scaffold12077 ScafM INDEL 0030.scaffold00117 768800 1 . T scaffold12077 ScafM INDEL 0030.scaffold00117 768844 3 TGT ... scaffold12077 ScafM SNP 0030.scaffold00117 768849 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 768851 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 768854 2 TG .. scaffold12077 ScafM INDEL 0030.scaffold00117 768858 1 C . scaffold12077 ScafM SNP 0030.scaffold00117 768874 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 768884 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 768890 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 768892 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 768919 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 768933 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 769364 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 769391 7 ....... TCCCACG scaffold12077 ScafM SNP 0030.scaffold00117 769406 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 769454 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 769459 2 CC TG scaffold12077 ScafM SNP 0030.scaffold00117 769472 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 769508 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 769518 2 GT AA scaffold12077 ScafM INDEL 0030.scaffold00117 769520 1 . A scaffold12077 ScafM SNP 0030.scaffold00117 769522 3 ATA GGG scaffold12077 ScafM SNP 0030.scaffold00117 769528 1 T A scaffold12077 ScafM SNP 0030.scaffold00117 769531 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 769533 13 AAAAAAAACAAAA TCTTTTTTGTTTT scaffold12077 ScafM INDEL 0030.scaffold00117 769547 1 T . scaffold12077 ScafM SNP 0030.scaffold00117 769554 1 G T scaffold12077 ScafM SNP 0030.scaffold00117 769558 2 AT GA scaffold12077 ScafM SNP 0030.scaffold00117 769585 1 C T scaffold12077 ScafM INDEL 0030.scaffold00117 769594 4 TATA .... scaffold12077 ScafM INDEL 0030.scaffold00117 769637 5 TTTAT ..... scaffold12077 ScafM SNP 0030.scaffold00117 769661 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 769667 1 A G scaffold12077 ReadM SNP 0030.scaffold00117 769889 1 T A - ScafM SNP 0030.scaffold00117 770216 1 G C scaffold12077 ScafM SNP 0030.scaffold00117 770219 1 C G scaffold12077 ScafM INDEL 0030.scaffold00117 770242 5 ....G AATTA scaffold12077 ScafM SNP 0030.scaffold00117 770275 1 G T scaffold12077 ReadM SNP 0030.scaffold00117 770372 1 A G - ReadM INDEL 0030.scaffold00117 770377 1 . A - ReadM INDEL 0030.scaffold00117 770477 1 . T - ReadM SNP 0030.scaffold00117 770485 1 A C - ReadM SNP 0030.scaffold00117 770489 1 C T - ReadM SNP 0030.scaffold00117 770543 1 C G - Both SNP 0030.scaffold00117 770597 1 G A scaffold12077 Both SNP 0030.scaffold00117 770738 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 770845 1 G A scaffold12077 ScafM SNP 0030.scaffold00117 770851 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 770854 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 770863 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 770869 2 GA AG scaffold12077 ScafM SNP 0030.scaffold00117 770937 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 770942 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 770944 1 A G scaffold12077 ScafM SNP 0030.scaffold00117 770951 1 G A scaffold12077 Both SNP 0030.scaffold00117 771020 1 G T scaffold12077 ScafM INDEL 0030.scaffold00117 771149 4 TCGA .... scaffold12077 Both SNP 0030.scaffold00117 771220 1 C A scaffold12077 Both SNP 0030.scaffold00117 771259 1 G A scaffold12077 Both SNP 0030.scaffold00117 771286 1 G A scaffold12077 Both INDEL 0030.scaffold00117 771350 2 TA .. scaffold12077 Both SNP 0030.scaffold00117 771410 1 C T scaffold12077 ReadM SNP 0030.scaffold00117 771517 1 C T - ReadM SNP 0030.scaffold00117 771818 1 T C - ReadM SNP 0030.scaffold00117 771826 1 C T - ScafM SNP 0030.scaffold00117 772222 1 A C scaffold12077 ScafM INDEL 0030.scaffold00117 772303 3 ..G CAA scaffold12077 ScafM SNP 0030.scaffold00117 773206 1 C T scaffold12077 ScafM SNP 0030.scaffold00117 773238 1 T C scaffold12077 ScafM SNP 0030.scaffold00117 773335 1 T G scaffold12077 ScafM SNP 0030.scaffold00117 773362 1 A T scaffold12077 ScafM SNP 0030.scaffold00117 773535 1 A G scaffold12077 Both SNP 0030.scaffold00117 773563 1 G A scaffold12077 Both SNP 0030.scaffold00117 773611 1 A G scaffold12077 Both SNP 0030.scaffold00117 773684 1 T G scaffold12077 ReadM SNP 0030.scaffold00117 773699 1 A T - ReadM SNP 0030.scaffold00117 773738 1 C T - ReadM SNP 0030.scaffold00117 773757 1 A T - ScafM SNP 0030.scaffold00117 773903 1 C T scaffold12077 Both SNP 0030.scaffold00117 773959 1 T C scaffold12077 Both SNP 0030.scaffold00117 774020 1 G T scaffold12077 Both SNP 0030.scaffold00117 774088 1 A G scaffold12077 ReadM SNP 0030.scaffold00117 774717 1 T A - ReadM SNP 0030.scaffold00117 774729 1 T C - ReadM SNP 0030.scaffold00117 774937 1 C T - ReadM SNP 0030.scaffold00117 777728 1 T A - ReadM SNP 0030.scaffold00117 777742 1 G C - ReadM SNP 0030.scaffold00117 778106 1 T C - ReadM SNP 0030.scaffold00117 778775 1 T G - ReadM SNP 0030.scaffold00117 778777 1 T A - ReadM SNP 0030.scaffold00117 778865 1 G A - ReadM SNP 0030.scaffold00117 778945 1 T G - ReadM SNP 0030.scaffold00117 779142 1 T C - ReadM SNP 0030.scaffold00117 779176 1 G A - ReadM SNP 0030.scaffold00117 779182 1 A T - ReadM SNP 0030.scaffold00117 779324 1 T C - ReadM SNP 0030.scaffold00117 781729 1 C T - ReadM SNP 0030.scaffold00117 781731 1 A G - ReadM SNP 0030.scaffold00117 781746 1 T C - ReadM SNP 0030.scaffold00117 781870 1 T G - ReadM SNP 0030.scaffold00117 782174 1 T C - ReadM INDEL 0030.scaffold00117 782295 1 A . - ReadM SNP 0030.scaffold00117 782364 1 G T - ReadM SNP 0030.scaffold00117 782387 1 A G - Both SNP 0030.scaffold00117 782600 1 T A scaffold4657 Both SNP 0030.scaffold00117 782651 1 T C scaffold4657 Both SNP 0030.scaffold00117 782674 1 T A scaffold4657 ReadM SNP 0030.scaffold00117 782701 1 G T - Both SNP 0030.scaffold00117 782865 1 T G scaffold4657 ScafM SNP 0030.scaffold00117 782870 1 A C scaffold4657 Both SNP 0030.scaffold00117 783118 1 A G scaffold4657 Both SNP 0030.scaffold00117 783142 1 A G scaffold4657 Both SNP 0030.scaffold00117 783153 1 A C scaffold4657 ReadM SNP 0030.scaffold00117 783327 1 C T - ScafM SNP 0030.scaffold00117 783446 1 C T scaffold4657 ScafM SNP 0030.scaffold00117 783460 1 G T scaffold4657 ScafM SNP 0030.scaffold00117 783472 1 C T scaffold4657 ScafM SNP 0030.scaffold00117 783530 1 G T scaffold4657 ScafM SNP 0030.scaffold00117 783533 1 T C scaffold4657 Both SNP 0030.scaffold00117 783569 1 A G scaffold4657 Both SNP 0030.scaffold00117 783691 1 C T scaffold4657 Both SNP 0030.scaffold00117 783695 1 G A scaffold4657 Both SNP 0030.scaffold00117 783725 1 A G scaffold4657 ReadM SNP 0030.scaffold00117 783881 1 G A - ReadM INDEL 0030.scaffold00117 783895 1 T . - ReadM SNP 0030.scaffold00117 784108 1 G T - ReadM SNP 0030.scaffold00117 784118 1 T C - ReadM SNP 0030.scaffold00117 784156 1 T C - ReadM SNP 0030.scaffold00117 784248 1 G A - ReadM SNP 0030.scaffold00117 784292 1 C T - ReadM SNP 0030.scaffold00117 784339 1 A G - ReadM SNP 0030.scaffold00117 784403 1 A C - ReadM SNP 0030.scaffold00117 784441 1 C T - ReadM SNP 0030.scaffold00117 784468 1 T C - ReadM SNP 0030.scaffold00117 784516 1 T C - ReadM SNP 0030.scaffold00117 784683 1 C T - ReadM SNP 0030.scaffold00117 784763 1 G A - ReadM SNP 0030.scaffold00117 784777 1 A G - ReadM SNP 0030.scaffold00117 784916 1 C A - ReadM SNP 0030.scaffold00117 784935 1 C A - ReadM SNP 0030.scaffold00117 784965 1 A G - ReadM SNP 0030.scaffold00117 784978 1 T G - ReadM SNP 0030.scaffold00117 785047 1 G C - ReadM SNP 0030.scaffold00117 785059 1 G A - ReadM SNP 0030.scaffold00117 785073 1 T A - ReadM SNP 0030.scaffold00117 785108 1 G A - ReadM SNP 0030.scaffold00117 785121 1 A G - ReadM SNP 0030.scaffold00117 785191 1 T C - ReadM SNP 0030.scaffold00117 785255 1 G A - ReadM SNP 0030.scaffold00117 785259 1 G T - ReadM SNP 0030.scaffold00117 785359 1 C T - ReadM SNP 0030.scaffold00117 785599 1 A C - ReadM SNP 0030.scaffold00117 785640 1 T A - ReadM SNP 0030.scaffold00117 785716 1 T C - ReadM SNP 0030.scaffold00117 785747 1 T C - ReadM SNP 0030.scaffold00117 785870 1 G A - ScafM SNP 0030.scaffold00117 786226 1 T A scaffold4657 ScafM SNP 0030.scaffold00117 786249 1 G A scaffold4657 ScafM SNP 0030.scaffold00117 786319 1 C T scaffold4657 ScafM SNP 0030.scaffold00117 786330 1 A C scaffold4657 ScafM SNP 0030.scaffold00117 786387 1 C T scaffold4657 ScafM SNP 0030.scaffold00117 786403 1 C A scaffold4657 ReadM SNP 0030.scaffold00117 786534 1 C A - ReadM SNP 0030.scaffold00117 786830 1 C A - ReadM SNP 0030.scaffold00117 786842 1 T C - ReadM SNP 0030.scaffold00117 786896 1 C T - ReadM SNP 0030.scaffold00117 786907 1 T C - ReadM SNP 0030.scaffold00117 786974 1 A G - ReadM SNP 0030.scaffold00117 787136 1 T A - ReadM SNP 0030.scaffold00117 787213 1 G A - ReadM SNP 0030.scaffold00117 787234 1 G T - ReadM SNP 0030.scaffold00117 787312 1 C A - ReadM SNP 0030.scaffold00117 787333 1 A G - ReadM SNP 0030.scaffold00117 787347 1 A T - ReadM SNP 0030.scaffold00117 787402 1 T C - ReadM SNP 0030.scaffold00117 787517 1 T A - ReadM SNP 0030.scaffold00117 787554 1 A C - ReadM SNP 0030.scaffold00117 787616 1 T C - ReadM SNP 0030.scaffold00117 787698 1 T C - ReadM SNP 0030.scaffold00117 787710 1 A G - ReadM SNP 0030.scaffold00117 787768 1 A G - ReadM SNP 0030.scaffold00117 787800 1 C T - ReadM SNP 0030.scaffold00117 787808 1 A C - ReadM SNP 0030.scaffold00117 787885 1 A G - ReadM SNP 0030.scaffold00117 787975 1 T C - ReadM SNP 0030.scaffold00117 788291 1 A G - ReadM SNP 0030.scaffold00117 788440 1 C A - ReadM SNP 0030.scaffold00117 788487 1 A G - ReadM SNP 0030.scaffold00117 788496 1 T C - ReadM SNP 0030.scaffold00117 788537 1 T A - ReadM SNP 0030.scaffold00117 788543 1 G A - ReadM SNP 0030.scaffold00117 788603 1 G A - ReadM SNP 0030.scaffold00117 788614 1 C T - ReadM SNP 0030.scaffold00117 788627 1 A G - ReadM SNP 0030.scaffold00117 788788 1 C T - ReadM SNP 0030.scaffold00117 788829 1 C T - ReadM SNP 0030.scaffold00117 788881 1 T A - ReadM SNP 0030.scaffold00117 788906 1 A C - ReadM SNP 0030.scaffold00117 788961 1 C T - ReadM SNP 0030.scaffold00117 788992 1 T C - ReadM SNP 0030.scaffold00117 789017 1 T C - ReadM SNP 0030.scaffold00117 789049 1 A C - ReadM SNP 0030.scaffold00117 789204 1 T C - ReadM SNP 0030.scaffold00117 789224 1 A C - ReadM SNP 0030.scaffold00117 789241 1 C A - ReadM SNP 0030.scaffold00117 789259 1 C T - ReadM SNP 0030.scaffold00117 789344 1 A G - ReadM SNP 0030.scaffold00117 789465 1 T C - ReadM SNP 0030.scaffold00117 789490 1 T C - ReadM SNP 0030.scaffold00117 789497 1 C T - ReadM SNP 0030.scaffold00117 789510 1 G A - ReadM SNP 0030.scaffold00117 789662 1 A G - ReadM SNP 0030.scaffold00117 789727 1 C T - ReadM SNP 0030.scaffold00117 789822 1 A G - ReadM SNP 0030.scaffold00117 789870 1 T G - ReadM SNP 0030.scaffold00117 789883 1 A G - ReadM SNP 0030.scaffold00117 789960 1 A G - ReadM SNP 0030.scaffold00117 789963 1 G A - ReadM SNP 0030.scaffold00117 789994 1 G C - ReadM SNP 0030.scaffold00117 790132 1 A T - ReadM SNP 0030.scaffold00117 790224 1 C T - ReadM SNP 0030.scaffold00117 790228 1 A G - ReadM SNP 0030.scaffold00117 790310 1 T C - ReadM SNP 0030.scaffold00117 790317 1 A C - ReadM SNP 0030.scaffold00117 790422 2 TT AA - ReadM SNP 0030.scaffold00117 790454 1 G A - ReadM SNP 0030.scaffold00117 790576 1 A G - ReadM SNP 0030.scaffold00117 790590 1 G C - ReadM SNP 0030.scaffold00117 790665 1 G T - ReadM INDEL 0030.scaffold00117 790746 1 C . - ReadM SNP 0030.scaffold00117 790777 1 T C - ReadM SNP 0030.scaffold00117 790862 1 A G - ReadM SNP 0030.scaffold00117 790888 1 T C - ReadM SNP 0030.scaffold00117 790963 1 A G - ReadM SNP 0030.scaffold00117 791154 1 C T - ReadM SNP 0030.scaffold00117 791258 1 T G - ReadM SNP 0030.scaffold00117 791297 1 A G - ReadM SNP 0030.scaffold00117 792928 1 C G - ReadM SNP 0030.scaffold00117 792942 1 C A - ReadM SNP 0030.scaffold00117 792956 1 C T - ReadM SNP 0030.scaffold00117 793058 1 C T - ReadM SNP 0030.scaffold00117 793150 1 G C - ReadM SNP 0030.scaffold00117 793153 1 G C - ReadM SNP 0030.scaffold00117 793178 1 T C - ReadM SNP 0030.scaffold00117 793203 1 A G - ReadM SNP 0030.scaffold00117 793235 1 A C - ReadM SNP 0030.scaffold00117 793320 1 T C - ReadM SNP 0030.scaffold00117 793401 1 G A - ReadM SNP 0030.scaffold00117 793456 1 G C - ReadM SNP 0030.scaffold00117 793522 1 A G - ReadM SNP 0030.scaffold00117 793597 1 G C - ReadM SNP 0030.scaffold00117 793654 1 T G - ReadM SNP 0030.scaffold00117 793660 1 C T - ReadM SNP 0030.scaffold00117 793918 1 T C - ReadM SNP 0030.scaffold00117 794048 1 C T - ReadM SNP 0030.scaffold00117 794051 1 T C - ReadM SNP 0030.scaffold00117 794067 1 G A - ReadM SNP 0030.scaffold00117 794140 1 C A - ReadM SNP 0030.scaffold00117 794514 1 C T - ReadM SNP 0030.scaffold00117 794584 1 G T - ReadM SNP 0030.scaffold00117 794674 1 G A - ReadM SNP 0030.scaffold00117 794727 1 A T - ReadM SNP 0030.scaffold00117 794834 1 A T - ReadM SNP 0030.scaffold00117 794865 1 A C - ReadM SNP 0030.scaffold00117 794907 1 C T - ReadM SNP 0030.scaffold00117 794930 1 T C - ReadM SNP 0030.scaffold00117 794951 1 C A - Both SNP 0030.scaffold00117 794985 1 C T scaffold316 Both SNP 0030.scaffold00117 795006 1 C T scaffold316 Both SNP 0030.scaffold00117 795040 1 C T scaffold316 Both SNP 0030.scaffold00117 795092 1 G T scaffold316 Both SNP 0030.scaffold00117 795109 1 T C scaffold316 ScafM SNP 0030.scaffold00117 795185 1 T C scaffold316 ScafM SNP 0030.scaffold00117 795188 1 T G scaffold316 ScafM SNP 0030.scaffold00117 795193 1 T C scaffold316 Both SNP 0030.scaffold00117 795213 1 T G scaffold316 Both SNP 0030.scaffold00117 795283 1 G T scaffold316 Both SNP 0030.scaffold00117 795362 1 C A scaffold316 Both SNP 0030.scaffold00117 795433 1 C G scaffold316 Both SNP 0030.scaffold00117 795458 1 A G scaffold316 Both SNP 0030.scaffold00117 795471 1 A G scaffold316 ReadM SNP 0030.scaffold00117 795555 1 T G - Both SNP 0030.scaffold00117 795679 1 T C scaffold316 Both SNP 0030.scaffold00117 795898 1 T G scaffold316 ScafM SNP 0030.scaffold00117 796015 1 T G scaffold316 ScafM SNP 0030.scaffold00117 796081 1 A T scaffold316 ScafM INDEL 0030.scaffold00117 796152 5 ..... TAGCT scaffold316 ScafM SNP 0030.scaffold00117 796260 1 C A scaffold316 ScafM INDEL 0030.scaffold00117 796294 5 TAGGT ..... scaffold316 ScafM INDEL 0030.scaffold00117 796300 1 G . scaffold316 ScafM SNP 0030.scaffold00117 796450 1 A T scaffold316 ScafM INDEL 0030.scaffold00117 796481 20 .................... GAGTAGAAGTGAGTAGAAGT scaffold316 ReadM SNP 0030.scaffold00117 796569 1 A G - ReadM SNP 0030.scaffold00117 796579 1 C A - ReadM SNP 0030.scaffold00117 796817 1 G C - ReadM INDEL 0030.scaffold00117 796992 1 G . - ReadM SNP 0030.scaffold00117 797050 1 C T - ReadM SNP 0030.scaffold00117 797079 1 C A - ReadM SNP 0030.scaffold00117 797223 1 C G - ReadM SNP 0030.scaffold00117 797236 1 T C - ReadM SNP 0030.scaffold00117 797284 1 A T - ReadM SNP 0030.scaffold00117 797320 1 T A - ReadM SNP 0030.scaffold00117 797359 1 A C - ReadM SNP 0030.scaffold00117 797418 1 G T - ReadM SNP 0030.scaffold00117 797456 1 A T - ReadM SNP 0030.scaffold00117 797538 1 A C - ReadM INDEL 0030.scaffold00117 797608 1 G . - ReadM SNP 0030.scaffold00117 797686 1 T G - Both SNP 0030.scaffold00117 797757 1 A T scaffold316 Both SNP 0030.scaffold00117 797772 1 C T scaffold316 Both SNP 0030.scaffold00117 797808 1 A C scaffold316 ScafM INDEL 0030.scaffold00117 797826 1 . T scaffold316 ScafM INDEL 0030.scaffold00117 797827 13 ............. TTTTTTTGTTTTT scaffold316 ScafM SNP 0030.scaffold00117 797849 1 C T scaffold316 ScafM INDEL 0030.scaffold00117 797853 3 ... CTT scaffold316 ScafM SNP 0030.scaffold00117 797854 1 A T scaffold316 ScafM SNP 0030.scaffold00117 797882 1 A G scaffold316 ScafM INDEL 0030.scaffold00117 797906 1 . T scaffold316 ScafM SNP 0030.scaffold00117 797912 1 T A scaffold316 ScafM INDEL 0030.scaffold00117 797925 1 . T scaffold316 ReadM SNP 0030.scaffold00117 798227 1 A G - ReadM SNP 0030.scaffold00117 798242 1 G T - ReadM SNP 0030.scaffold00117 798372 1 C G - ReadM SNP 0030.scaffold00117 798378 1 G T - ReadM SNP 0030.scaffold00117 798447 1 G A - ReadM SNP 0030.scaffold00117 798450 1 A C - ReadM SNP 0030.scaffold00117 798493 1 C A - ReadM SNP 0030.scaffold00117 798499 1 G A - ReadM SNP 0030.scaffold00117 798525 1 G A - ReadM SNP 0030.scaffold00117 798636 1 G C - ReadM SNP 0030.scaffold00117 798671 1 C T - ReadM SNP 0030.scaffold00117 798766 1 A G - ReadM SNP 0030.scaffold00117 798774 1 A G - ReadM SNP 0030.scaffold00117 798818 1 A G - ReadM SNP 0030.scaffold00117 798833 1 T C - ReadM SNP 0030.scaffold00117 798917 1 T C - ReadM SNP 0030.scaffold00117 798946 1 G A - ReadM SNP 0030.scaffold00117 799026 1 T G - ReadM SNP 0030.scaffold00117 799072 1 A C - ReadM SNP 0030.scaffold00117 799219 1 T C - ReadM SNP 0030.scaffold00117 799350 1 G A - ReadM INDEL 0030.scaffold00117 799522 1 T . - ReadM SNP 0030.scaffold00117 799790 1 A T - ReadM SNP 0030.scaffold00117 799916 1 C T - ReadM SNP 0030.scaffold00117 799924 1 T A - ReadM SNP 0030.scaffold00117 800103 1 G A - ReadM SNP 0030.scaffold00117 800227 1 T A - ReadM SNP 0030.scaffold00117 800258 1 A C - ReadM SNP 0030.scaffold00117 800278 1 G T - Both SNP 0030.scaffold00117 800347 1 G C scaffold316 Both SNP 0030.scaffold00117 800354 1 G C scaffold316 Both SNP 0030.scaffold00117 800379 1 C G scaffold316 Both SNP 0030.scaffold00117 800425 1 C T scaffold316 Both SNP 0030.scaffold00117 800480 1 T C scaffold316 Both INDEL 0030.scaffold00117 800502 1 T . scaffold316 Both SNP 0030.scaffold00117 800530 1 A G scaffold316 Both SNP 0030.scaffold00117 800572 1 A G scaffold316 Both SNP 0030.scaffold00117 800589 1 C T scaffold316 Both SNP 0030.scaffold00117 800750 1 T C scaffold316 ReadM SNP 0030.scaffold00117 800957 1 A G - ReadM SNP 0030.scaffold00117 800966 1 A G - ReadM SNP 0030.scaffold00117 801035 1 T G - ReadM SNP 0030.scaffold00117 801077 1 C T - ReadM INDEL 0030.scaffold00117 801159 2 .. TC - ReadM INDEL 0030.scaffold00117 801161 2 .. TT - ReadM SNP 0030.scaffold00117 801205 1 G T - ReadM SNP 0030.scaffold00117 801223 1 G A - ReadM SNP 0030.scaffold00117 801237 1 G A - ReadM SNP 0030.scaffold00117 801343 1 T C - ReadM SNP 0030.scaffold00117 801356 1 C G - ReadM SNP 0030.scaffold00117 801374 1 T C - ReadM SNP 0030.scaffold00117 801490 1 C A - ReadM SNP 0030.scaffold00117 801516 1 C G - ReadM SNP 0030.scaffold00117 801521 1 C G - ReadM INDEL 0030.scaffold00117 801563 1 . G - ReadM SNP 0030.scaffold00117 801637 1 T G - ReadM SNP 0030.scaffold00117 801656 1 A T - ReadM SNP 0030.scaffold00117 801666 1 C T - ReadM SNP 0030.scaffold00117 801759 1 C G - ReadM SNP 0030.scaffold00117 801783 1 A G - ReadM SNP 0030.scaffold00117 801868 1 C G - ReadM SNP 0030.scaffold00117 801893 1 T C - ReadM SNP 0030.scaffold00117 801954 1 C G - ReadM SNP 0030.scaffold00117 801960 1 A G - ReadM SNP 0030.scaffold00117 801976 1 T G - ReadM SNP 0030.scaffold00117 802050 1 G T - ReadM SNP 0030.scaffold00117 802126 1 C T - ReadM SNP 0030.scaffold00117 802183 1 G A - ReadM INDEL 0030.scaffold00117 802226 2 AT .. - ReadM SNP 0030.scaffold00117 803110 1 C T - ReadM SNP 0030.scaffold00117 803117 1 G A - ReadM SNP 0030.scaffold00117 803200 1 A T - ReadM SNP 0030.scaffold00117 803254 1 A C - ReadM SNP 0030.scaffold00117 803293 1 G C - ReadM SNP 0030.scaffold00117 803415 1 G T - ReadM SNP 0030.scaffold00117 803465 1 T C - ReadM SNP 0030.scaffold00117 803468 1 A G - ReadM SNP 0030.scaffold00117 803547 1 T G - ReadM SNP 0030.scaffold00117 803574 1 C G - ReadM SNP 0030.scaffold00117 803711 1 G A - ReadM SNP 0030.scaffold00117 803770 1 C T - ReadM SNP 0030.scaffold00117 803821 1 A G - ReadM SNP 0030.scaffold00117 803840 1 A T - ReadM SNP 0030.scaffold00117 804021 1 A G - ReadM SNP 0030.scaffold00117 804056 1 T G - ReadM SNP 0030.scaffold00117 804117 1 A T - ReadM SNP 0030.scaffold00117 804123 1 C A - ReadM SNP 0030.scaffold00117 804209 1 G A - ReadM SNP 0030.scaffold00117 804226 1 A C - ReadM SNP 0030.scaffold00117 804263 1 C G - ReadM SNP 0030.scaffold00117 804309 1 G A - ReadM SNP 0030.scaffold00117 804332 1 C T - ReadM SNP 0030.scaffold00117 804342 1 A G - ReadM SNP 0030.scaffold00117 804404 1 C T - ReadM SNP 0030.scaffold00117 804410 1 A C - ReadM SNP 0030.scaffold00117 804506 1 C T - ReadM SNP 0030.scaffold00117 804631 1 G A - ReadM SNP 0030.scaffold00117 804651 1 A T - ReadM SNP 0030.scaffold00117 804681 1 A C - ReadM SNP 0030.scaffold00117 804777 1 G T - ReadM SNP 0030.scaffold00117 804781 1 G T - Both SNP 0030.scaffold00117 805053 1 T G scaffold316 ReadM SNP 0030.scaffold00117 805063 1 A G - ReadM SNP 0030.scaffold00117 805141 1 G A - ReadM SNP 0030.scaffold00117 805147 1 T C - ReadM SNP 0030.scaffold00117 805154 1 T C - ReadM SNP 0030.scaffold00117 805188 1 T C - ReadM SNP 0030.scaffold00117 805280 1 G A - ReadM SNP 0030.scaffold00117 805287 1 A G - ReadM SNP 0030.scaffold00117 805321 1 T A - ReadM SNP 0030.scaffold00117 805389 1 A G - Both SNP 0030.scaffold00117 805637 1 A C scaffold316 Both SNP 0030.scaffold00117 805801 1 T C scaffold316 Both SNP 0030.scaffold00117 805808 1 A G scaffold316 ScafM SNP 0030.scaffold00117 805955 2 CA TG scaffold316 Both SNP 0030.scaffold00117 805960 1 A T scaffold316 Both SNP 0030.scaffold00117 806045 1 A G scaffold316 Both SNP 0030.scaffold00117 806058 1 C A scaffold316 Both SNP 0030.scaffold00117 806136 1 T C scaffold316 Both SNP 0030.scaffold00117 806211 1 C G scaffold316 Both SNP 0030.scaffold00117 806441 1 G A scaffold316 ScafM SNP 0030.scaffold00117 806459 1 C T scaffold316 ScafM SNP 0030.scaffold00117 806478 1 G A scaffold316 ScafM SNP 0030.scaffold00117 806485 1 T C scaffold316 ScafM SNP 0030.scaffold00117 806536 1 G A scaffold316 ReadM SNP 0030.scaffold00117 806576 1 G A - ReadM SNP 0030.scaffold00117 806579 1 T C - ReadM SNP 0030.scaffold00117 806596 1 T C - Both SNP 0030.scaffold00117 806781 1 A G scaffold316 Both SNP 0030.scaffold00117 806799 1 C T scaffold316 Both SNP 0030.scaffold00117 806888 1 C T scaffold316 Both SNP 0030.scaffold00117 807074 1 A C scaffold316 ReadM SNP 0030.scaffold00117 807148 1 C T - Both SNP 0030.scaffold00117 807180 1 A G scaffold316 Both SNP 0030.scaffold00117 807190 1 T C scaffold316 Both INDEL 0030.scaffold00117 807192 1 T . scaffold316 Both SNP 0030.scaffold00117 807297 1 C T scaffold316 Both SNP 0030.scaffold00117 807302 1 A G scaffold316 ReadM SNP 0030.scaffold00117 807389 1 G T - ReadM SNP 0030.scaffold00117 807402 1 T C - ReadM SNP 0030.scaffold00117 807453 1 C A - ReadM SNP 0030.scaffold00117 807479 1 A G - ReadM SNP 0030.scaffold00117 807484 1 G T - ReadM SNP 0030.scaffold00117 807509 1 T A - ReadM SNP 0030.scaffold00117 807560 1 G C - ReadM SNP 0030.scaffold00117 807576 1 C T - ReadM SNP 0030.scaffold00117 807600 1 T C - ReadM SNP 0030.scaffold00117 807699 1 G A - ReadM SNP 0030.scaffold00117 807704 1 G C - Both SNP 0030.scaffold00117 807755 2 TT CC scaffold316 Both SNP 0030.scaffold00117 807841 1 C T scaffold316 Both SNP 0030.scaffold00117 807894 1 A C scaffold316 ReadM SNP 0030.scaffold00117 807928 1 A G - Both SNP 0030.scaffold00117 808144 1 A G scaffold316 Both SNP 0030.scaffold00117 808555 1 A T scaffold316 Both SNP 0030.scaffold00117 808781 1 A G scaffold316 Both SNP 0030.scaffold00117 809138 1 T G scaffold316 Both SNP 0030.scaffold00117 809194 1 G A scaffold316 Both SNP 0030.scaffold00117 809234 1 T C scaffold316 Both SNP 0030.scaffold00117 809296 1 C T scaffold316 Both INDEL 0030.scaffold00117 809306 1 T . scaffold316 Both INDEL 0030.scaffold00117 809412 1 . G scaffold316 Both SNP 0030.scaffold00117 809450 1 G A scaffold316 Both SNP 0030.scaffold00117 809527 1 A G scaffold316 Both SNP 0030.scaffold00117 809563 1 C T scaffold316 Both SNP 0030.scaffold00117 809598 1 T C scaffold316 ScafM SNP 0030.scaffold00117 809662 1 T C scaffold316 ReadM SNP 0030.scaffold00117 809731 1 T G - ReadM SNP 0030.scaffold00117 809756 1 C T - ReadM SNP 0030.scaffold00117 809758 1 G A - ReadM SNP 0030.scaffold00117 809809 1 A G - ReadM SNP 0030.scaffold00117 809917 1 G A - ReadM SNP 0030.scaffold00117 809942 1 T G - ReadM SNP 0030.scaffold00117 809978 1 A C - ReadM SNP 0030.scaffold00117 810023 1 C T - ReadM SNP 0030.scaffold00117 810025 1 C G - Both SNP 0030.scaffold00117 810080 1 G C scaffold316 Both SNP 0030.scaffold00117 810102 1 G C scaffold316 Both SNP 0030.scaffold00117 810110 1 C T scaffold316 Both SNP 0030.scaffold00117 810198 1 G C scaffold316 Both SNP 0030.scaffold00117 810386 1 T C scaffold316 Both SNP 0030.scaffold00117 810547 1 C T scaffold316 Both SNP 0030.scaffold00117 810569 1 G A scaffold316 Both SNP 0030.scaffold00117 810690 1 T C scaffold316 Both SNP 0030.scaffold00117 810772 1 T C scaffold316 ScafM SNP 0030.scaffold00117 810782 1 C A scaffold316 Both SNP 0030.scaffold00117 810797 1 T G scaffold316 Both SNP 0030.scaffold00117 810872 1 C A scaffold316 ReadM INDEL 0030.scaffold00117 810918 1 . C - ScafM INDEL 0030.scaffold00117 810918 2 .T CA scaffold316 Both SNP 0030.scaffold00117 811006 1 C T scaffold316 Both SNP 0030.scaffold00117 811021 1 C G scaffold316 ReadM SNP 0030.scaffold00117 811086 1 A G - ReadM SNP 0030.scaffold00117 811124 1 C T - ReadM SNP 0030.scaffold00117 811341 1 G A - ReadM SNP 0030.scaffold00117 811361 1 A G - ReadM SNP 0030.scaffold00117 811411 1 A G - ReadM SNP 0030.scaffold00117 811463 1 A C - ReadM SNP 0030.scaffold00117 811517 1 T C - ReadM SNP 0030.scaffold00117 811621 1 C T - ReadM SNP 0030.scaffold00117 811624 1 T C - ReadM SNP 0030.scaffold00117 811809 1 G A - ReadM SNP 0030.scaffold00117 811823 1 T C - ReadM SNP 0030.scaffold00117 811879 1 A G - ReadM SNP 0030.scaffold00117 811982 1 T C - ReadM SNP 0030.scaffold00117 811986 1 G C - ReadM SNP 0030.scaffold00117 812031 1 C G - ReadM INDEL 0030.scaffold00117 812032 1 . A - ReadM SNP 0030.scaffold00117 812074 1 G T - ReadM SNP 0030.scaffold00117 812159 1 T A - ReadM SNP 0030.scaffold00117 812213 1 T C - ReadM SNP 0030.scaffold00117 812514 1 C T - ReadM SNP 0030.scaffold00117 812787 1 T A - ReadM SNP 0030.scaffold00117 812941 1 A G - ReadM SNP 0030.scaffold00117 812948 1 T A - ReadM SNP 0030.scaffold00117 812991 1 T C - ReadM SNP 0030.scaffold00117 813053 1 T C - ReadM SNP 0030.scaffold00117 813099 1 T G - ReadM SNP 0030.scaffold00117 813109 1 T C - ReadM SNP 0030.scaffold00117 813115 1 G A - ReadM SNP 0030.scaffold00117 813197 1 G A - ReadM SNP 0030.scaffold00117 813371 1 C T - Both SNP 0030.scaffold00117 813515 1 T C scaffold316 Both SNP 0030.scaffold00117 813660 1 C T scaffold316 ReadM SNP 0030.scaffold00117 813706 2 AC TG - ReadM SNP 0030.scaffold00117 813771 1 A G - ReadM SNP 0030.scaffold00117 813862 1 C T - ReadM SNP 0030.scaffold00117 813888 1 A G - ScafM SNP 0030.scaffold00117 814055 1 C G scaffold316 ScafM SNP 0030.scaffold00117 814077 1 G A scaffold316 ReadM SNP 0030.scaffold00117 817199 1 C T - ReadM SNP 0030.scaffold00117 817440 1 G A - ReadM SNP 0030.scaffold00117 817457 1 T C - ReadM INDEL 0030.scaffold00117 817487 1 T . - ReadM SNP 0030.scaffold00117 817676 1 C T - ReadM SNP 0030.scaffold00117 817737 1 C A - ReadM SNP 0030.scaffold00117 818119 1 G T - ReadM SNP 0030.scaffold00117 818139 1 C T - ReadM SNP 0030.scaffold00117 818228 1 T C - ReadM SNP 0030.scaffold00117 818274 1 T C - ReadM SNP 0030.scaffold00117 818499 1 C G - ReadM SNP 0030.scaffold00117 818509 1 G T - ReadM SNP 0030.scaffold00117 818578 1 A G - ReadM SNP 0030.scaffold00117 818583 1 T C - ReadM SNP 0030.scaffold00117 818665 1 C T - ReadM SNP 0030.scaffold00117 818795 1 T G - ReadM SNP 0030.scaffold00117 818859 1 G T - ReadM SNP 0030.scaffold00117 818861 1 G A - ReadM SNP 0030.scaffold00117 818977 1 A G - ReadM SNP 0030.scaffold00117 819074 1 C T - ReadM SNP 0030.scaffold00117 819090 1 A G - ReadM SNP 0030.scaffold00117 819099 1 G A - ReadM SNP 0030.scaffold00117 819388 1 A G - ReadM SNP 0030.scaffold00117 819441 1 T C - ReadM SNP 0030.scaffold00117 819569 1 C T - ReadM SNP 0030.scaffold00117 819593 1 A G - ReadM SNP 0030.scaffold00117 819625 1 T A - ReadM SNP 0030.scaffold00117 819694 1 A G - ReadM SNP 0030.scaffold00117 819783 1 G C - ReadM SNP 0030.scaffold00117 819790 1 A C - ReadM SNP 0030.scaffold00117 824734 1 T C - ReadM INDEL 0030.scaffold00117 824763 1 C . - ReadM SNP 0030.scaffold00117 824991 1 A G - ReadM SNP 0030.scaffold00117 825196 1 T C - ReadM SNP 0030.scaffold00117 825210 1 T G - ReadM SNP 0030.scaffold00117 825268 1 A G - ReadM SNP 0030.scaffold00117 825340 1 G A - ReadM SNP 0030.scaffold00117 825521 1 T G - ReadM SNP 0030.scaffold00117 827369 1 T C - ReadM SNP 0030.scaffold00117 827392 1 A G - ReadM SNP 0030.scaffold00117 827458 1 G A - ReadM INDEL 0030.scaffold00117 827483 1 G . - ReadM SNP 0030.scaffold00117 827501 1 G A - ReadM SNP 0030.scaffold00117 827521 1 T C - ReadM SNP 0030.scaffold00117 827536 1 T C - ReadM SNP 0030.scaffold00117 827607 1 T G - ReadM SNP 0030.scaffold00117 827675 1 A G - ReadM SNP 0030.scaffold00117 827767 1 G T - ReadM SNP 0030.scaffold00117 827772 1 T G - ReadM SNP 0030.scaffold00117 827802 1 G A - ReadM SNP 0030.scaffold00117 827813 1 G A - ReadM SNP 0030.scaffold00117 827879 1 C T - ReadM SNP 0030.scaffold00117 827881 1 C G - ReadM SNP 0030.scaffold00117 828008 1 A G - ReadM SNP 0030.scaffold00117 828117 1 A G - ReadM SNP 0030.scaffold00117 828141 1 G C - ReadM SNP 0030.scaffold00117 828464 1 A G - ReadM SNP 0030.scaffold00117 828490 1 T C - ReadM SNP 0030.scaffold00117 828618 1 C G - ReadM SNP 0030.scaffold00117 828651 1 G A - ReadM SNP 0030.scaffold00117 828770 1 G C - ReadM SNP 0030.scaffold00117 828834 1 T A - ReadM SNP 0030.scaffold00117 828891 1 C T - ReadM SNP 0030.scaffold00117 828915 1 G A - ReadM SNP 0030.scaffold00117 828958 1 G A - ReadM SNP 0030.scaffold00117 828971 1 C T - ReadM SNP 0030.scaffold00117 829010 1 G A - ReadM SNP 0030.scaffold00117 829033 1 T C - ReadM SNP 0030.scaffold00117 829039 1 C T - ReadM SNP 0030.scaffold00117 829156 1 T C - ReadM SNP 0030.scaffold00117 829158 1 G A - ReadM SNP 0030.scaffold00117 829325 1 A C - ReadM SNP 0030.scaffold00117 829437 1 G C - ReadM SNP 0030.scaffold00117 829482 1 G A - ReadM SNP 0030.scaffold00117 829710 1 C A - ReadM SNP 0030.scaffold00117 829722 1 C T - ReadM SNP 0030.scaffold00117 829770 1 C T - ReadM SNP 0030.scaffold00117 829836 1 G A - Both SNP 0030.scaffold00117 829904 1 G T scaffold5870 Both SNP 0030.scaffold00117 830029 1 C T scaffold5870 ReadM INDEL 0030.scaffold00117 830035 1 . A - ReadM SNP 0030.scaffold00117 830162 1 A G - ReadM SNP 0030.scaffold00117 830200 1 A G - ReadM SNP 0030.scaffold00117 830335 1 A C - ReadM SNP 0030.scaffold00117 830356 1 T G - ReadM SNP 0030.scaffold00117 830395 1 T C - ReadM SNP 0030.scaffold00117 830436 1 C A - ReadM SNP 0030.scaffold00117 830500 1 G T - ScafM SNP 0030.scaffold00117 830588 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 830590 1 C T scaffold5870 ReadM SNP 0030.scaffold00117 830658 1 A G - ReadM INDEL 0030.scaffold00117 830676 1 C . - ReadM SNP 0030.scaffold00117 830788 1 A G - ReadM SNP 0030.scaffold00117 830813 1 A G - ReadM INDEL 0030.scaffold00117 830822 1 . T - ScafM SNP 0030.scaffold00117 831829 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 831858 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 831882 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 831932 1 T A scaffold5870 Both SNP 0030.scaffold00117 831958 1 C T scaffold5870 Both SNP 0030.scaffold00117 832040 1 C A scaffold5870 ScafM SNP 0030.scaffold00117 832266 1 A T scaffold5870 ScafM SNP 0030.scaffold00117 832676 1 C T scaffold5870 Both SNP 0030.scaffold00117 833007 1 T G scaffold5870 Both SNP 0030.scaffold00117 833039 1 T A scaffold5870 Both SNP 0030.scaffold00117 833082 1 C T scaffold5870 Both SNP 0030.scaffold00117 833087 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 833185 1 A C scaffold5870 Both SNP 0030.scaffold00117 833198 1 A T scaffold5870 ScafM INDEL 0030.scaffold00117 833257 1 T . scaffold5870 ScafM SNP 0030.scaffold00117 833287 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 833312 1 A G scaffold5870 Both INDEL 0030.scaffold00117 833486 1 C . scaffold5870 ReadM SNP 0030.scaffold00117 833560 1 C T - ReadM SNP 0030.scaffold00117 833577 1 G A - ReadM SNP 0030.scaffold00117 833653 1 A G - ReadM SNP 0030.scaffold00117 833662 1 C T - ReadM SNP 0030.scaffold00117 833721 1 C T - ReadM SNP 0030.scaffold00117 833798 1 C G - Both SNP 0030.scaffold00117 833846 1 C G scaffold5870 Both SNP 0030.scaffold00117 833912 1 C T scaffold5870 Both INDEL 0030.scaffold00117 833940 1 . C scaffold5870 Both SNP 0030.scaffold00117 833958 1 C G scaffold5870 Both SNP 0030.scaffold00117 834010 1 C A scaffold5870 ReadM SNP 0030.scaffold00117 834035 1 T C - ReadM SNP 0030.scaffold00117 834112 1 T C - ReadM SNP 0030.scaffold00117 834146 1 A G - ReadM SNP 0030.scaffold00117 834185 1 C T - ReadM SNP 0030.scaffold00117 834212 1 T C - Both SNP 0030.scaffold00117 834324 1 A G scaffold5870 ScafM INDEL 0030.scaffold00117 834455 1 . A scaffold5870 ScafM SNP 0030.scaffold00117 834459 1 C A scaffold5870 ScafM INDEL 0030.scaffold00117 834461 1 T . scaffold5870 Both SNP 0030.scaffold00117 834551 1 T C scaffold5870 Both SNP 0030.scaffold00117 834578 1 T A scaffold5870 Both SNP 0030.scaffold00117 834692 1 G A scaffold5870 Both SNP 0030.scaffold00117 834749 1 A G scaffold5870 Both SNP 0030.scaffold00117 834784 1 C T scaffold5870 Both SNP 0030.scaffold00117 834836 1 A T scaffold5870 Both SNP 0030.scaffold00117 834853 1 A C scaffold5870 Both SNP 0030.scaffold00117 834861 1 C T scaffold5870 Both SNP 0030.scaffold00117 835000 1 C A scaffold5870 Both SNP 0030.scaffold00117 835081 1 G T scaffold5870 Both INDEL 0030.scaffold00117 835128 1 . A scaffold5870 Both INDEL 0030.scaffold00117 835191 1 G . scaffold5870 ReadM INDEL 0030.scaffold00117 835193 1 C . - ScafM SNP 0030.scaffold00117 835193 1 C A scaffold5870 Both SNP 0030.scaffold00117 835278 1 C T scaffold5870 ReadM SNP 0030.scaffold00117 835459 1 A C - Both INDEL 0030.scaffold00117 835516 1 T . scaffold5870 ScafM SNP 0030.scaffold00117 835518 1 T A scaffold5870 Both SNP 0030.scaffold00117 835585 1 G A scaffold5870 Both SNP 0030.scaffold00117 835720 1 G A scaffold5870 Both SNP 0030.scaffold00117 835818 1 G T scaffold5870 Both SNP 0030.scaffold00117 835874 1 T G scaffold5870 Both SNP 0030.scaffold00117 835900 1 C T scaffold5870 Both SNP 0030.scaffold00117 835926 1 C T scaffold5870 Both SNP 0030.scaffold00117 836001 1 C T scaffold5870 Both SNP 0030.scaffold00117 836023 1 T C scaffold5870 Both SNP 0030.scaffold00117 836131 1 T C scaffold5870 Both SNP 0030.scaffold00117 836144 1 T C scaffold5870 Both SNP 0030.scaffold00117 836278 1 C A scaffold5870 Both SNP 0030.scaffold00117 836372 1 G A scaffold5870 Both SNP 0030.scaffold00117 836403 1 C T scaffold5870 Both SNP 0030.scaffold00117 836532 1 T C scaffold5870 Both SNP 0030.scaffold00117 836534 1 G A scaffold5870 Both SNP 0030.scaffold00117 836539 1 A T scaffold5870 ReadM SNP 0030.scaffold00117 836619 1 A G - ReadM SNP 0030.scaffold00117 836624 1 G T - ReadM SNP 0030.scaffold00117 836643 1 C G - ReadM SNP 0030.scaffold00117 836725 1 A G - ScafM SNP 0030.scaffold00117 836928 1 A G scaffold5870 ScafM INDEL 0030.scaffold00117 836935 7 ....... GTCATTT scaffold5870 Both SNP 0030.scaffold00117 837129 1 A G scaffold5870 Both SNP 0030.scaffold00117 837177 1 C G scaffold5870 Both SNP 0030.scaffold00117 837206 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 837284 2 CT TG scaffold5870 ReadM SNP 0030.scaffold00117 837465 1 C A - ScafM SNP 0030.scaffold00117 839132 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 839140 1 A T scaffold5870 ScafM INDEL 0030.scaffold00117 839147 3 TTA ... scaffold5870 ScafM SNP 0030.scaffold00117 839214 1 G C scaffold5870 Both SNP 0030.scaffold00117 839360 1 T C scaffold5870 Both SNP 0030.scaffold00117 839390 1 A G scaffold5870 Both SNP 0030.scaffold00117 839459 1 G A scaffold5870 Both SNP 0030.scaffold00117 839489 1 C G scaffold5870 Both SNP 0030.scaffold00117 839947 1 C A scaffold5870 ScafM SNP 0030.scaffold00117 840179 2 GT TC scaffold5870 ScafM INDEL 0030.scaffold00117 840182 5 AGAAG ..... scaffold5870 Both SNP 0030.scaffold00117 840254 1 T C scaffold5870 Both SNP 0030.scaffold00117 840436 1 C T scaffold5870 Both SNP 0030.scaffold00117 840443 1 C G scaffold5870 Both SNP 0030.scaffold00117 840672 1 A T scaffold5870 Both SNP 0030.scaffold00117 840678 1 G T scaffold5870 Both SNP 0030.scaffold00117 840797 1 C T scaffold5870 ScafM INDEL 0030.scaffold00117 840831 3 ... AAC scaffold5870 ScafM SNP 0030.scaffold00117 840939 1 G C scaffold5870 ScafM SNP 0030.scaffold00117 840948 1 A C scaffold5870 Both SNP 0030.scaffold00117 840969 1 A G scaffold5870 Both SNP 0030.scaffold00117 840982 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 841061 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 841067 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 841070 2 CA TG scaffold5870 Both SNP 0030.scaffold00117 841166 1 G C scaffold5870 Both SNP 0030.scaffold00117 841176 1 G A scaffold5870 Both SNP 0030.scaffold00117 841217 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 841237 1 C A scaffold5870 ScafM INDEL 0030.scaffold00117 841238 1 . A scaffold5870 ScafM SNP 0030.scaffold00117 841242 1 T C scaffold5870 Both SNP 0030.scaffold00117 841259 1 A C scaffold5870 Both SNP 0030.scaffold00117 841386 1 G A scaffold5870 Both SNP 0030.scaffold00117 841402 1 G T scaffold5870 Both INDEL 0030.scaffold00117 841416 1 C . scaffold5870 Both SNP 0030.scaffold00117 841448 1 C A scaffold5870 ScafM INDEL 0030.scaffold00117 841500 4 GCCG .... scaffold5870 ScafM SNP 0030.scaffold00117 841515 1 A T scaffold5870 ScafM SNP 0030.scaffold00117 841521 1 C A scaffold5870 Both SNP 0030.scaffold00117 841612 1 G A scaffold5870 Both SNP 0030.scaffold00117 841735 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 841770 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 841772 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 841796 1 G C scaffold5870 Both SNP 0030.scaffold00117 841812 1 A G scaffold5870 Both SNP 0030.scaffold00117 841862 1 C A scaffold5870 Both SNP 0030.scaffold00117 841864 1 G A scaffold5870 Both SNP 0030.scaffold00117 841913 1 C A scaffold5870 Both SNP 0030.scaffold00117 841984 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 842030 1 A G scaffold5870 Both SNP 0030.scaffold00117 842088 1 T A scaffold5870 Both SNP 0030.scaffold00117 842105 1 C G scaffold5870 Both SNP 0030.scaffold00117 842116 1 C T scaffold5870 ScafM INDEL 0030.scaffold00117 842140 35 TCCTAAGCCATAAGGGGTTCAACGACCACCTGAGC ................................... scaffold5870 ScafM INDEL 0030.scaffold00117 842208 1 . C scaffold5870 ScafM SNP 0030.scaffold00117 842210 2 TT AA scaffold5870 Both SNP 0030.scaffold00117 842270 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 842283 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 842301 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 842333 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 842339 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 842371 1 A G scaffold5870 ScafM INDEL 0030.scaffold00117 842375 15 TATTTTCCTAGTGTT ............... scaffold5870 ScafM INDEL 0030.scaffold00117 842395 10 CAGAATCTCC .......... scaffold5870 ScafM INDEL 0030.scaffold00117 842407 1 A . scaffold5870 ScafM INDEL 0030.scaffold00117 842410 8 ATTCCCTA ........ scaffold5870 ScafM INDEL 0030.scaffold00117 842419 1 T . scaffold5870 ScafM SNP 0030.scaffold00117 842448 1 A G scaffold5870 ScafM INDEL 0030.scaffold00117 842452 3 CGA ... scaffold5870 Both SNP 0030.scaffold00117 842637 1 C G scaffold5870 ScafM SNP 0030.scaffold00117 842662 1 T A scaffold5870 Both SNP 0030.scaffold00117 842671 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 842744 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 842750 1 T G scaffold5870 Both INDEL 0030.scaffold00117 842766 1 . T scaffold5870 Both SNP 0030.scaffold00117 842841 1 A T scaffold5870 Both SNP 0030.scaffold00117 842969 1 A G scaffold5870 ReadM SNP 0030.scaffold00117 843038 1 C T - ScafM SNP 0030.scaffold00117 843411 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 843439 1 C T scaffold5870 ScafM INDEL 0030.scaffold00117 843475 1 . G scaffold5870 ScafM INDEL 0030.scaffold00117 843477 1 . A scaffold5870 ScafM INDEL 0030.scaffold00117 843478 2 .. TT scaffold5870 ScafM SNP 0030.scaffold00117 843491 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 843496 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 843518 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843547 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 843569 1 A T scaffold5870 ScafM SNP 0030.scaffold00117 843581 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 843597 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843630 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843642 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843644 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 843667 1 G T scaffold5870 ScafM SNP 0030.scaffold00117 843682 1 T G scaffold5870 ScafM SNP 0030.scaffold00117 843691 1 T G scaffold5870 ScafM SNP 0030.scaffold00117 843696 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 843730 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 843736 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843749 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 843758 1 G C scaffold5870 ScafM INDEL 0030.scaffold00117 843826 1 C . scaffold5870 ScafM SNP 0030.scaffold00117 843872 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 843997 1 G A scaffold539 ScafM SNP 0030.scaffold00117 844387 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 844389 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 844401 1 G T scaffold5870 ScafM SNP 0030.scaffold00117 844416 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 844437 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 844449 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 844470 1 T G scaffold5870 ScafM SNP 0030.scaffold00117 844473 1 G A scaffold5870 Both SNP 0030.scaffold00117 844482 1 G A scaffold5870 ReadM SNP 0030.scaffold00117 844666 1 C G - ReadM INDEL 0030.scaffold00117 844837 1 A . - ReadM SNP 0030.scaffold00117 844862 1 A G - ReadM SNP 0030.scaffold00117 844971 1 T C - ReadM SNP 0030.scaffold00117 845069 1 T C - ReadM SNP 0030.scaffold00117 845112 1 T A - ReadM SNP 0030.scaffold00117 845193 1 C A - ReadM SNP 0030.scaffold00117 845222 1 G A - ReadM SNP 0030.scaffold00117 845242 1 A C - ReadM SNP 0030.scaffold00117 845255 1 T G - ReadM SNP 0030.scaffold00117 845329 1 A G - ReadM SNP 0030.scaffold00117 845354 1 A T - ReadM SNP 0030.scaffold00117 845370 1 C T - ReadM INDEL 0030.scaffold00117 845499 2 CT .. - ReadM SNP 0030.scaffold00117 845533 1 G A - ReadM SNP 0030.scaffold00117 845613 1 G A - ReadM SNP 0030.scaffold00117 845648 1 T C - ReadM SNP 0030.scaffold00117 845687 1 A G - ReadM SNP 0030.scaffold00117 845696 1 A C - ReadM SNP 0030.scaffold00117 845745 1 C T - ReadM SNP 0030.scaffold00117 845764 1 T A - ReadM SNP 0030.scaffold00117 845768 1 C A - Both SNP 0030.scaffold00117 845819 1 G T scaffold5870 Both SNP 0030.scaffold00117 845839 1 G A scaffold5870 Both INDEL 0030.scaffold00117 845842 1 A . scaffold5870 Both SNP 0030.scaffold00117 845908 1 T C scaffold5870 Both SNP 0030.scaffold00117 845926 1 T G scaffold5870 ScafM INDEL 0030.scaffold00117 845965 3 ATC ... scaffold5870 Both SNP 0030.scaffold00117 845982 1 A G scaffold5870 Both SNP 0030.scaffold00117 846017 1 T C scaffold5870 Both SNP 0030.scaffold00117 846042 1 T C scaffold5870 ReadM SNP 0030.scaffold00117 846079 1 G A - ReadM SNP 0030.scaffold00117 846121 1 A T - ReadM SNP 0030.scaffold00117 846159 1 C T - ReadM SNP 0030.scaffold00117 846272 1 G A - ReadM SNP 0030.scaffold00117 846368 1 G T - ReadM SNP 0030.scaffold00117 846384 1 G A - ReadM SNP 0030.scaffold00117 846457 1 A G - ReadM SNP 0030.scaffold00117 846464 1 G A - ReadM SNP 0030.scaffold00117 846468 1 T A - ScafM SNP 0030.scaffold00117 846768 1 C A scaffold5870 Both SNP 0030.scaffold00117 846802 1 T G scaffold5870 Both SNP 0030.scaffold00117 846830 1 T C scaffold5870 Both SNP 0030.scaffold00117 846857 1 C T scaffold5870 ScafM INDEL 0030.scaffold00117 846896 12 GTTCTGATTCAT ............ scaffold5870 ScafM INDEL 0030.scaffold00117 846912 1 T . scaffold5870 ScafM INDEL 0030.scaffold00117 846915 2 TT .. scaffold5870 Both SNP 0030.scaffold00117 846957 1 A T scaffold5870 Both SNP 0030.scaffold00117 846972 1 T A scaffold5870 Both SNP 0030.scaffold00117 846983 1 C G scaffold5870 Both INDEL 0030.scaffold00117 847091 1 C . scaffold5870 ReadM SNP 0030.scaffold00117 847139 1 G A - ReadM SNP 0030.scaffold00117 847189 1 T A - ReadM SNP 0030.scaffold00117 847338 1 G A - ReadM SNP 0030.scaffold00117 847345 1 T C - ReadM SNP 0030.scaffold00117 847436 1 C T - ReadM SNP 0030.scaffold00117 847442 1 G C - ReadM SNP 0030.scaffold00117 847550 1 A G - ReadM SNP 0030.scaffold00117 847598 1 G A - ReadM SNP 0030.scaffold00117 847639 1 C T - ReadM SNP 0030.scaffold00117 847653 1 A C - ReadM SNP 0030.scaffold00117 847737 1 G A - ReadM SNP 0030.scaffold00117 847769 1 C A - ReadM SNP 0030.scaffold00117 847782 1 G T - ReadM SNP 0030.scaffold00117 847815 1 A T - ReadM SNP 0030.scaffold00117 847912 1 G C - ReadM SNP 0030.scaffold00117 847960 1 G A - ReadM SNP 0030.scaffold00117 847969 1 T C - ReadM SNP 0030.scaffold00117 847994 1 C G - ReadM SNP 0030.scaffold00117 848276 1 A G - ReadM SNP 0030.scaffold00117 848312 1 T C - ReadM SNP 0030.scaffold00117 848361 1 G A - ReadM SNP 0030.scaffold00117 848435 1 T C - ReadM SNP 0030.scaffold00117 848437 1 T C - ReadM SNP 0030.scaffold00117 848516 1 A G - Both SNP 0030.scaffold00117 848620 1 T C scaffold5870 Both SNP 0030.scaffold00117 848634 1 G A scaffold5870 Both SNP 0030.scaffold00117 848728 1 A G scaffold5870 Both SNP 0030.scaffold00117 848786 1 T A scaffold5870 Both SNP 0030.scaffold00117 848868 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 848996 1 T A scaffold5870 ScafM INDEL 0030.scaffold00117 849023 6 ...... CTTCCC scaffold5870 ScafM SNP 0030.scaffold00117 849049 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 849092 1 G A scaffold5870 Both SNP 0030.scaffold00117 849124 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 849170 2 AC TT scaffold5870 Both SNP 0030.scaffold00117 849255 1 T G scaffold5870 ReadM SNP 0030.scaffold00117 849364 1 C T - ScafM SNP 0030.scaffold00117 849881 1 C G scaffold5870 ScafM SNP 0030.scaffold00117 849892 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 849901 1 G C scaffold5870 ScafM SNP 0030.scaffold00117 849909 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 849927 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 849941 1 T G scaffold5870 ScafM SNP 0030.scaffold00117 849989 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 849995 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 850012 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 850015 1 G T scaffold5870 ScafM SNP 0030.scaffold00117 850253 2 GT AC scaffold5870 ScafM INDEL 0030.scaffold00117 850273 2 .. TA scaffold5870 ScafM SNP 0030.scaffold00117 850301 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 850323 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 850327 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 850331 1 A T scaffold5870 ScafM SNP 0030.scaffold00117 850345 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 850372 1 A T scaffold5870 ScafM SNP 0030.scaffold00117 850415 1 G A scaffold5870 ScafM INDEL 0030.scaffold00117 850440 1 A . scaffold5870 ScafM SNP 0030.scaffold00117 850443 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 850453 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 850456 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 850472 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 850526 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 850533 1 T A scaffold5870 ScafM INDEL 0030.scaffold00117 850542 7 TGTAAGA ....... scaffold5870 ScafM SNP 0030.scaffold00117 850566 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 850573 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 850599 1 G T scaffold5870 ScafM SNP 0030.scaffold00117 850620 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 850628 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 850639 1 G C scaffold5870 ScafM INDEL 0030.scaffold00117 850644 1 C . scaffold5870 Both SNP 0030.scaffold00117 850914 1 A T scaffold5870 Both SNP 0030.scaffold00117 850937 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 851102 1 A G scaffold5870 ScafM SNP 0030.scaffold00117 851559 1 T A scaffold5870 Both INDEL 0030.scaffold00117 851721 3 ... ACG scaffold5870 ScafM SNP 0030.scaffold00117 851835 1 G C scaffold5870 ScafM INDEL 0030.scaffold00117 851872 1 T . scaffold5870 Both SNP 0030.scaffold00117 851893 1 C T scaffold5870 ReadM SNP 0030.scaffold00117 852093 1 C A - ReadM SNP 0030.scaffold00117 852110 1 T G - ReadM SNP 0030.scaffold00117 852198 1 T A - ReadM SNP 0030.scaffold00117 852212 1 A G - ScafM SNP 0030.scaffold00117 852260 1 T G scaffold5870 ScafM SNP 0030.scaffold00117 852262 1 T A scaffold5870 ScafM SNP 0030.scaffold00117 852269 1 A C scaffold5870 ScafM SNP 0030.scaffold00117 852275 1 T A scaffold5870 ScafM INDEL 0030.scaffold00117 852277 1 . T scaffold5870 ScafM SNP 0030.scaffold00117 852296 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 852311 1 C A scaffold5870 ScafM SNP 0030.scaffold00117 852313 1 C G scaffold5870 ScafM INDEL 0030.scaffold00117 852337 2 .A TG scaffold5870 ScafM SNP 0030.scaffold00117 852342 1 G T scaffold5870 Both SNP 0030.scaffold00117 852887 1 T C scaffold5870 ReadM SNP 0030.scaffold00117 853079 1 G A - ReadM SNP 0030.scaffold00117 853118 1 G A - ReadM SNP 0030.scaffold00117 853163 1 G A - ReadM SNP 0030.scaffold00117 853169 1 A C - ScafM SNP 0030.scaffold00117 853782 1 C T scaffold5870 ScafM SNP 0030.scaffold00117 853784 1 G A scaffold5870 ScafM SNP 0030.scaffold00117 853793 1 T C scaffold5870 ScafM SNP 0030.scaffold00117 854063 1 T A scaffold5870 ReadM SNP 0030.scaffold00117 862323 1 C A - ScafM SNP 0030.scaffold00117 871345 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 871376 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 871379 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 871410 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 871426 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 871437 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 874918 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 874943 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 874988 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 874996 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 875000 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 875013 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 875028 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 875920 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 875925 1 G C scaffold5052 ScafM SNP 0030.scaffold00117 875942 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 875947 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 875949 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 875952 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 875975 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 876033 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 876035 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 876040 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 876047 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 876054 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 876060 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 876062 1 G A scaffold5052 ScafM INDEL 0030.scaffold00117 876071 1 A . scaffold5052 ScafM SNP 0030.scaffold00117 876079 1 G A scaffold5052 ScafM INDEL 0030.scaffold00117 876112 1 . A scaffold5052 ScafM SNP 0030.scaffold00117 876173 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 876179 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 876184 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 876196 2 AT GC scaffold5052 ScafM SNP 0030.scaffold00117 876203 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 876207 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 876274 1 G C scaffold5052 ScafM SNP 0030.scaffold00117 876290 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 876297 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 876331 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 876343 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 876359 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 876379 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 876389 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 876396 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 876430 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 877841 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 877880 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 877907 1 C G scaffold5052 ReadM SNP 0030.scaffold00117 887847 1 T C - ReadM INDEL 0030.scaffold00117 888360 1 . C - ScafM SNP 0030.scaffold00117 892951 1 G T scaffold1323 ScafM SNP 0030.scaffold00117 892960 1 C A scaffold1323 ScafM SNP 0030.scaffold00117 893002 1 A G scaffold1323 ScafM SNP 0030.scaffold00117 893078 1 A G scaffold1323 ScafM SNP 0030.scaffold00117 893088 2 CT TC scaffold1323 ScafM SNP 0030.scaffold00117 893140 1 A G scaffold1323 ScafM SNP 0030.scaffold00117 893144 1 T C scaffold1323 ScafM SNP 0030.scaffold00117 893182 1 T C scaffold1323 ScafM SNP 0030.scaffold00117 893225 1 C A scaffold1323 ScafM SNP 0030.scaffold00117 893241 1 A G scaffold1323 ScafM SNP 0030.scaffold00117 896459 1 C A scaffold10784 ScafM SNP 0030.scaffold00117 896463 1 G A scaffold10784 ScafM SNP 0030.scaffold00117 896466 1 C A scaffold10784 ScafM SNP 0030.scaffold00117 896470 1 C T scaffold10784 ScafM INDEL 0030.scaffold00117 896496 7 TGATGAG ....... scaffold10784 ScafM INDEL 0030.scaffold00117 896526 3 ... TGT scaffold10784 ScafM INDEL 0030.scaffold00117 896528 2 .. TT scaffold10784 ScafM INDEL 0030.scaffold00117 896531 1 . G scaffold10784 ScafM SNP 0030.scaffold00117 896534 1 C T scaffold10784 ScafM SNP 0030.scaffold00117 897588 2 TT CC scaffold5052 ScafM SNP 0030.scaffold00117 897593 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 897599 2 GC AT scaffold5052 ScafM SNP 0030.scaffold00117 897630 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 897664 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 897671 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 897676 1 . G scaffold5052 ScafM SNP 0030.scaffold00117 897678 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 897693 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 897696 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 897719 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 897724 2 CA TC scaffold5052 ScafM SNP 0030.scaffold00117 897732 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 897770 2 CA TG scaffold5052 ScafM SNP 0030.scaffold00117 897777 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 897782 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 897790 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 897799 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 897820 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 897862 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 897901 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 898340 1 T C scaffold149 ScafM SNP 0030.scaffold00117 898353 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898372 1 C G scaffold149 ScafM SNP 0030.scaffold00117 898376 1 A C scaffold149 ScafM SNP 0030.scaffold00117 898383 1 T G scaffold149 ScafM SNP 0030.scaffold00117 898388 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898390 1 A G scaffold149 ScafM SNP 0030.scaffold00117 898420 1 G C scaffold149 ScafM SNP 0030.scaffold00117 898428 1 A C scaffold149 ScafM SNP 0030.scaffold00117 898442 1 A G scaffold149 ScafM SNP 0030.scaffold00117 898467 1 A T scaffold149 ScafM SNP 0030.scaffold00117 898494 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898545 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898554 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898569 1 T G scaffold149 ScafM SNP 0030.scaffold00117 898581 1 T A scaffold149 ScafM SNP 0030.scaffold00117 898603 1 G A scaffold149 ScafM SNP 0030.scaffold00117 898606 2 TT CC scaffold149 ScafM SNP 0030.scaffold00117 898616 1 G A scaffold149 ScafM INDEL 0030.scaffold00117 898622 2 AC .. scaffold149 ScafM INDEL 0030.scaffold00117 898625 1 T . scaffold149 ScafM INDEL 0030.scaffold00117 898629 7 TAAGAAG ....... scaffold149 ScafM INDEL 0030.scaffold00117 898639 1 A . scaffold149 ScafM SNP 0030.scaffold00117 898643 1 C A scaffold149 ScafM SNP 0030.scaffold00117 898660 1 A T scaffold149 ScafM INDEL 0030.scaffold00117 898664 1 . C scaffold149 ScafM SNP 0030.scaffold00117 898673 1 A G scaffold149 ScafM SNP 0030.scaffold00117 898686 2 CG TT scaffold149 ScafM SNP 0030.scaffold00117 898690 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898713 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898728 1 C T scaffold149 ScafM INDEL 0030.scaffold00117 898747 2 .. GT scaffold149 ScafM INDEL 0030.scaffold00117 898748 4 .... TCTG scaffold149 ScafM INDEL 0030.scaffold00117 898751 1 . A scaffold149 ScafM SNP 0030.scaffold00117 898756 1 G T scaffold149 ScafM SNP 0030.scaffold00117 898769 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898773 1 C T scaffold149 ScafM SNP 0030.scaffold00117 898775 1 T C scaffold149 ScafM SNP 0030.scaffold00117 898781 2 TG CA scaffold149 ScafM INDEL 0030.scaffold00117 898810 2 .C TT scaffold149 ScafM SNP 0030.scaffold00117 898832 1 A G scaffold149 ScafM SNP 0030.scaffold00117 898834 1 G T scaffold149 ScafM SNP 0030.scaffold00117 898847 1 C A scaffold149 ScafM SNP 0030.scaffold00117 899158 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 899164 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 899175 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899207 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899256 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899274 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 899292 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 899297 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 899306 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 899346 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899365 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899374 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 899386 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899397 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 899425 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899451 2 TA GT scaffold5052 ScafM INDEL 0030.scaffold00117 899470 2 .. TT scaffold5052 ScafM SNP 0030.scaffold00117 899513 1 G A scaffold5052 ScafM INDEL 0030.scaffold00117 899535 3 CTT ... scaffold5052 ScafM SNP 0030.scaffold00117 899569 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899571 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899577 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899589 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 899628 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899631 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 899649 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899668 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899680 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 899692 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 899714 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899716 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899722 1 G T scaffold5052 ScafM INDEL 0030.scaffold00117 899730 1 A . scaffold5052 ScafM SNP 0030.scaffold00117 899754 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 899782 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899789 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899802 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 899820 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 899836 1 A G scaffold5052 ScafM INDEL 0030.scaffold00117 899866 1 . C scaffold5052 ScafM SNP 0030.scaffold00117 899870 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899879 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899895 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 899909 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 899936 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 899941 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 899953 1 T C scaffold5052 ScafM INDEL 0030.scaffold00117 899965 2 TG .C scaffold5052 ScafM INDEL 0030.scaffold00117 899979 1 . G scaffold5052 ScafM SNP 0030.scaffold00117 899985 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 899998 2 AC CG scaffold5052 ScafM SNP 0030.scaffold00117 900011 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900020 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900022 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900065 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 900080 2 GC TT scaffold5052 ScafM SNP 0030.scaffold00117 900095 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 900099 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900105 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900146 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900165 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900168 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900198 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 900232 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900240 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 900305 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900317 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 900361 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 900378 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 900441 3 ... AAT scaffold5052 ScafM INDEL 0030.scaffold00117 900452 2 AA .. scaffold5052 ScafM SNP 0030.scaffold00117 900456 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 900465 2 AA CT scaffold5052 ScafM SNP 0030.scaffold00117 900471 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900474 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 900490 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900494 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900510 1 C G scaffold5052 ScafM INDEL 0030.scaffold00117 900512 3 ... GGT scaffold5052 ScafM SNP 0030.scaffold00117 900514 2 GA TT scaffold5052 ScafM SNP 0030.scaffold00117 900523 2 GC TT scaffold5052 ScafM SNP 0030.scaffold00117 900580 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900590 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900621 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 900637 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 900696 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900706 1 G C scaffold5052 ScafM SNP 0030.scaffold00117 900718 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900721 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 900725 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900756 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900758 1 G T scaffold5052 ScafM INDEL 0030.scaffold00117 900764 4 CAAA .... scaffold5052 ScafM SNP 0030.scaffold00117 900771 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900776 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900800 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 900820 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900849 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900884 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 900887 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 900893 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 900895 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900945 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 900953 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900972 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 900989 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 900996 1 T C scaffold5052 Both SNP 0030.scaffold00117 901061 1 T C scaffold5052 ReadM SNP 0030.scaffold00117 901393 1 G A - ReadM SNP 0030.scaffold00117 901545 1 G A - ReadM SNP 0030.scaffold00117 901556 1 T G - Both SNP 0030.scaffold00117 901617 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 901648 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 901659 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 901661 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 901668 2 TT CG scaffold5052 ScafM SNP 0030.scaffold00117 901679 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 901691 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 901701 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901732 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 901752 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 901764 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901777 1 G C scaffold5052 ScafM SNP 0030.scaffold00117 901791 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901805 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 901811 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901828 1 G T scaffold5052 ScafM INDEL 0030.scaffold00117 901845 18 .................. GTCATCAATGAATGTAAC scaffold5052 ScafM SNP 0030.scaffold00117 901856 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 901859 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901874 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 901920 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 901927 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 901968 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 901994 1 C T scaffold5052 Both SNP 0030.scaffold00117 902053 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 902102 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 902113 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 902115 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 916974 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 917000 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 917028 1 T . scaffold5052 ScafM SNP 0030.scaffold00117 917030 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 917035 2 GT AG scaffold5052 ScafM SNP 0030.scaffold00117 917048 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917055 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 917057 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 917062 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917064 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917082 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 917085 2 TA AT scaffold5052 ScafM SNP 0030.scaffold00117 917094 1 G A scaffold5052 ScafM INDEL 0030.scaffold00117 917113 1 . A scaffold5052 ScafM SNP 0030.scaffold00117 917122 2 GT AC scaffold5052 ScafM SNP 0030.scaffold00117 917135 1 A T scaffold5052 ScafM INDEL 0030.scaffold00117 917137 1 C . scaffold5052 ScafM SNP 0030.scaffold00117 917151 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 917197 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917209 1 C G scaffold5052 ScafM INDEL 0030.scaffold00117 917212 1 T . scaffold5052 ScafM SNP 0030.scaffold00117 917220 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 917222 1 C A scaffold5052 ScafM SNP 0030.scaffold00117 917242 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 917248 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 917256 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 917261 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917269 2 GC TT scaffold5052 ScafM SNP 0030.scaffold00117 917275 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 917304 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 917306 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917312 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 917321 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 917324 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917332 1 C A scaffold5052 ScafM INDEL 0030.scaffold00117 917352 6 CCATCT ...... scaffold5052 ScafM SNP 0030.scaffold00117 917395 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 917406 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 917411 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 917433 1 C G scaffold5052 ReadM SNP 0030.scaffold00117 917617 1 G A - ReadM SNP 0030.scaffold00117 917664 1 A G - ReadM SNP 0030.scaffold00117 917889 1 A T - ReadM SNP 0030.scaffold00117 917929 1 T C - ReadM SNP 0030.scaffold00117 938425 1 G C - ReadM SNP 0030.scaffold00117 938511 1 A C - ReadM SNP 0030.scaffold00117 938515 1 A G - ReadM SNP 0030.scaffold00117 938875 1 A G - ReadM SNP 0030.scaffold00117 938897 1 G T - ReadM SNP 0030.scaffold00117 938954 1 T C - ReadM SNP 0030.scaffold00117 938972 1 T A - ReadM SNP 0030.scaffold00117 939142 1 G C - ReadM SNP 0030.scaffold00117 939973 1 A G - ReadM INDEL 0030.scaffold00117 940768 1 A . - ReadM SNP 0030.scaffold00117 941127 1 T G - Both SNP 0030.scaffold00117 941720 1 G A scaffold5052 Both SNP 0030.scaffold00117 941727 1 C T scaffold5052 Both SNP 0030.scaffold00117 941730 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 941782 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 941784 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 941787 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 941809 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 941834 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 941838 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 941845 1 T A scaffold5052 ScafM INDEL 0030.scaffold00117 941905 2 .. AG scaffold5052 ScafM SNP 0030.scaffold00117 941960 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 941970 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 942003 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 942007 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 942009 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 942046 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 942059 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 942063 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 942166 1 C A scaffold5052 ScafM INDEL 0030.scaffold00117 942185 3 TTT .CC scaffold5052 ScafM INDEL 0030.scaffold00117 942245 3 ... TAA scaffold5052 ScafM SNP 0030.scaffold00117 942275 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 942277 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 942295 1 G T scaffold5052 ScafM SNP 0030.scaffold00117 942299 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 942325 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 942385 2 AA .. scaffold5052 ScafM SNP 0030.scaffold00117 942388 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 942423 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 942442 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 942465 1 . G scaffold5052 ScafM SNP 0030.scaffold00117 942475 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 942507 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 942618 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 942623 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 942647 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 942657 1 C T scaffold5052 ScafM SNP 0030.scaffold00117 942670 2 AA GG scaffold5052 ScafM SNP 0030.scaffold00117 942680 1 A G scaffold5052 ScafM INDEL 0030.scaffold00117 942700 1 . A scaffold5052 ScafM SNP 0030.scaffold00117 942702 2 TT AG scaffold5052 ScafM INDEL 0030.scaffold00117 942745 1 C . scaffold5052 ScafM SNP 0030.scaffold00117 942755 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 942765 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 942780 1 C G scaffold5052 ScafM SNP 0030.scaffold00117 943619 1 A T scaffold5083 ScafM SNP 0030.scaffold00117 943626 2 TC AT scaffold5083 ScafM SNP 0030.scaffold00117 943631 1 A G scaffold5083 ScafM SNP 0030.scaffold00117 943653 1 C G scaffold5083 ScafM SNP 0030.scaffold00117 944071 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944073 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944091 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944115 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944123 1 T A scaffold5083 ScafM INDEL 0030.scaffold00117 944127 4 .... GGTC scaffold5083 ScafM SNP 0030.scaffold00117 944146 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944148 1 T A scaffold5083 ScafM SNP 0030.scaffold00117 944166 1 G A scaffold5083 ScafM SNP 0030.scaffold00117 944169 2 CC TA scaffold5083 ScafM SNP 0030.scaffold00117 944172 1 C A scaffold5083 ScafM SNP 0030.scaffold00117 944182 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944184 1 C G scaffold5083 ScafM SNP 0030.scaffold00117 944217 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944220 1 C A scaffold5083 ScafM SNP 0030.scaffold00117 944227 1 G A scaffold5083 ScafM SNP 0030.scaffold00117 944229 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944238 1 C G scaffold5083 ScafM SNP 0030.scaffold00117 944241 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944253 1 G T scaffold5083 ScafM SNP 0030.scaffold00117 944269 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944306 2 AG CA scaffold5083 ScafM SNP 0030.scaffold00117 944310 1 A G scaffold5083 ScafM SNP 0030.scaffold00117 944329 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944334 1 A T scaffold5083 ScafM INDEL 0030.scaffold00117 944342 2 AT .. scaffold5083 ScafM SNP 0030.scaffold00117 944355 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944363 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944371 1 G T scaffold5083 ScafM SNP 0030.scaffold00117 944378 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944381 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944389 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944411 1 C G scaffold5083 ScafM SNP 0030.scaffold00117 944430 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944439 1 T G scaffold5083 ScafM SNP 0030.scaffold00117 944445 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944453 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944475 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944520 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944524 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944529 1 C A scaffold5083 ScafM INDEL 0030.scaffold00117 944547 1 G . scaffold5083 ScafM INDEL 0030.scaffold00117 944549 2 CC .. scaffold5083 ScafM INDEL 0030.scaffold00117 944553 5 TGCTA ..... scaffold5083 ScafM INDEL 0030.scaffold00117 944559 1 T . scaffold5083 ScafM SNP 0030.scaffold00117 944598 1 A C scaffold5083 ScafM INDEL 0030.scaffold00117 944604 3 ... GCT scaffold5083 ScafM SNP 0030.scaffold00117 944613 1 G T scaffold5083 ScafM SNP 0030.scaffold00117 944634 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944638 1 C T scaffold5083 ScafM SNP 0030.scaffold00117 944651 1 A C scaffold5083 ScafM SNP 0030.scaffold00117 944653 1 G A scaffold5083 ScafM SNP 0030.scaffold00117 944676 1 G A scaffold5083 ScafM SNP 0030.scaffold00117 944684 1 T C scaffold5083 ScafM SNP 0030.scaffold00117 944699 1 C A scaffold5083 ScafM SNP 0030.scaffold00117 944761 2 CA AC scaffold5083 ScafM SNP 0030.scaffold00117 948491 1 A G scaffold5052 ScafM INDEL 0030.scaffold00117 948502 1 C . scaffold5052 ScafM SNP 0030.scaffold00117 948518 1 C T scaffold5052 ScafM INDEL 0030.scaffold00117 948529 1 T . scaffold5052 ScafM INDEL 0030.scaffold00117 948538 6 GTTTTG ...... scaffold5052 ScafM SNP 0030.scaffold00117 948545 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 948547 3 TTT CCC scaffold5052 ScafM SNP 0030.scaffold00117 948551 2 TG CC scaffold5052 ScafM INDEL 0030.scaffold00117 948598 3 ... AGA scaffold5052 ScafM SNP 0030.scaffold00117 948602 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 948612 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 949853 1 A G scaffold5052 ScafM INDEL 0030.scaffold00117 949879 2 .. TA scaffold5052 ScafM SNP 0030.scaffold00117 950302 1 G A scaffold5052 ScafM INDEL 0030.scaffold00117 950319 3 AGA ... scaffold5052 ScafM INDEL 0030.scaffold00117 950323 1 A . scaffold5052 ScafM INDEL 0030.scaffold00117 950326 2 GG .. scaffold5052 ScafM INDEL 0030.scaffold00117 950330 5 TCCGG ..... scaffold5052 ScafM SNP 0030.scaffold00117 950336 1 G C scaffold5052 ScafM INDEL 0030.scaffold00117 950339 3 TAG ... scaffold5052 ScafM SNP 0030.scaffold00117 950354 2 CT AC scaffold5052 ScafM SNP 0030.scaffold00117 950366 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 950368 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 950371 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 950377 1 T A scaffold5052 ScafM SNP 0030.scaffold00117 950387 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 950415 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 950428 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 950435 2 CA TG scaffold5052 ScafM SNP 0030.scaffold00117 950449 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 950460 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 950473 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 950494 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 950496 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 950507 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 950527 1 A C scaffold5052 ScafM SNP 0030.scaffold00117 950530 1 A T scaffold5052 ScafM SNP 0030.scaffold00117 950976 1 A G scaffold5052 ScafM SNP 0030.scaffold00117 950997 1 G A scaffold5052 ScafM SNP 0030.scaffold00117 950999 1 T G scaffold5052 ScafM SNP 0030.scaffold00117 951047 1 T C scaffold5052 ScafM SNP 0030.scaffold00117 951337 1 G A scaffold7488 ScafM SNP 0030.scaffold00117 951359 1 G A scaffold7488 ScafM INDEL 0030.scaffold00117 951401 4 .... ACCA scaffold7488 ScafM SNP 0030.scaffold00117 951419 1 T C scaffold7488 ScafM SNP 0030.scaffold00117 951457 1 A G scaffold7488 ScafM SNP 0030.scaffold00117 951483 1 C T scaffold7488 ScafM SNP 0030.scaffold00117 951512 1 A G scaffold7488 ScafM SNP 0030.scaffold00117 951534 1 G A scaffold7488 ScafM SNP 0030.scaffold00117 951559 1 A C scaffold7488 ScafM SNP 0030.scaffold00117 951580 1 G A scaffold7488 ScafM SNP 0030.scaffold00117 951590 1 G A scaffold7488 ScafM SNP 0030.scaffold00117 951607 1 C T scaffold7488 ScafM INDEL 0030.scaffold00117 951615 3 ... TTA scaffold7488 ScafM INDEL 0030.scaffold00117 951653 1 . G scaffold7488 ScafM SNP 0030.scaffold00117 951680 1 C T scaffold7488 ScafM SNP 0030.scaffold00117 951685 1 A C scaffold7488 ScafM SNP 0030.scaffold00117 951726 1 G A scaffold7488 ScafM SNP 0030.scaffold00117 952137 1 A T scaffold9573 ScafM SNP 0030.scaffold00117 952149 1 T C scaffold9573 ScafM SNP 0030.scaffold00117 952162 1 T C scaffold9573 ScafM SNP 0030.scaffold00117 952206 1 C T scaffold9573 ScafM SNP 0030.scaffold00117 952255 1 G A scaffold9573 ScafM INDEL 0030.scaffold00117 952288 1 T . scaffold9573 ScafM SNP 0030.scaffold00117 952320 1 A C scaffold9573 ScafM SNP 0030.scaffold00117 952353 1 C G scaffold9573 ScafM SNP 0030.scaffold00117 952360 1 A G scaffold9573 ScafM SNP 0030.scaffold00117 952471 1 T C scaffold9573 ScafM INDEL 0030.scaffold00117 952506 1 . T scaffold9573 ScafM SNP 0030.scaffold00117 952516 1 T C scaffold9573 ScafM INDEL 0030.scaffold00117 952547 1 . T scaffold9573 ScafM SNP 0030.scaffold00117 952549 1 C T scaffold9573 ScafM SNP 0030.scaffold00117 952591 1 G A scaffold9573 ScafM SNP 0030.scaffold00117 952686 2 AT GC scaffold9573 ScafM SNP 0030.scaffold00117 952751 1 G A scaffold9573 ScafM SNP 0030.scaffold00117 952774 1 A G scaffold9573 ScafM SNP 0030.scaffold00117 952819 1 T A scaffold9573 ScafM SNP 0030.scaffold00117 952835 1 G A scaffold9573 ScafM SNP 0030.scaffold00117 952888 1 T A scaffold9573 ScafM SNP 0030.scaffold00117 952897 1 A G scaffold9573 ScafM SNP 0030.scaffold00117 952938 1 C G scaffold9573 ScafM INDEL 0030.scaffold00117 952973 2 AA .. scaffold9573 ScafM INDEL 0030.scaffold00117 952979 1 G . scaffold9573 ScafM SNP 0030.scaffold00117 955452 1 T C scaffold1323 ScafM SNP 0030.scaffold00117 955481 1 G A scaffold1323 ScafM SNP 0030.scaffold00117 955493 1 G A scaffold1323 ScafM SNP 0030.scaffold00117 955499 1 G C scaffold1323 ScafM SNP 0030.scaffold00117 955514 1 A T scaffold1323 ScafM SNP 0030.scaffold00117 955530 1 G C scaffold1323 ScafM SNP 0030.scaffold00117 955533 1 C T scaffold1323 ScafM INDEL 0030.scaffold00117 955540 4 AAGG .... scaffold1323 ScafM SNP 0030.scaffold00117 955785 1 C T scaffold133 ScafM SNP 0030.scaffold00117 955789 1 C G scaffold133 ScafM SNP 0030.scaffold00117 955794 1 A G scaffold133 ScafM SNP 0030.scaffold00117 955821 1 G C scaffold133 ScafM SNP 0030.scaffold00117 955824 1 C T scaffold133 ScafM SNP 0030.scaffold00117 955849 1 G A scaffold133 ScafM SNP 0030.scaffold00117 955853 1 T C scaffold133 ScafM SNP 0030.scaffold00117 955859 1 A G scaffold133 ScafM SNP 0030.scaffold00117 955920 1 G A scaffold133 ScafM SNP 0030.scaffold00117 955940 1 T C scaffold133 ScafM SNP 0030.scaffold00117 955971 1 T C scaffold133 ScafM SNP 0030.scaffold00117 955989 1 T C scaffold133 ScafM SNP 0030.scaffold00117 956050 1 G A scaffold133 ScafM INDEL 0030.scaffold00117 956055 1 . C scaffold133 ScafM SNP 0030.scaffold00117 956068 1 C G scaffold133 ScafM SNP 0030.scaffold00117 956075 1 T C scaffold133 ScafM SNP 0030.scaffold00117 956079 1 C T scaffold133 ScafM SNP 0030.scaffold00117 956093 1 C T scaffold133 ScafM SNP 0030.scaffold00117 956121 1 T C scaffold133 ScafM SNP 0030.scaffold00117 956125 1 A G scaffold133 ScafM SNP 0030.scaffold00117 956160 1 A C scaffold133 ScafM SNP 0030.scaffold00117 956208 1 G A scaffold133 ScafM SNP 0030.scaffold00117 956237 1 T C scaffold133 ScafM SNP 0030.scaffold00117 956246 2 CG TC scaffold133 ScafM SNP 0030.scaffold00117 958826 1 A T scaffold12503 ScafM INDEL 0030.scaffold00117 958834 1 G . scaffold12503 ScafM SNP 0030.scaffold00117 959049 1 T C scaffold12503 ScafM SNP 0030.scaffold00117 959051 1 G T scaffold12503 ScafM SNP 0030.scaffold00117 959112 1 T A scaffold12503 ReadM SNP 0030.scaffold00117 959178 1 T C - ReadM SNP 0030.scaffold00117 959323 1 G C - ReadM SNP 0030.scaffold00117 959325 1 G T - ReadM SNP 0030.scaffold00117 959442 1 G T - ReadM SNP 0030.scaffold00117 959484 1 C G - ReadM SNP 0030.scaffold00117 959535 1 G A - ScafM SNP 0030.scaffold00117 959589 1 G T scaffold12503 ScafM INDEL 0030.scaffold00117 959648 4 TCAT .... scaffold12503 ScafM SNP 0030.scaffold00117 959659 1 A C scaffold12503 ScafM SNP 0030.scaffold00117 959686 1 C T scaffold12503 Both INDEL 0030.scaffold00117 959726 3 ... AGA scaffold12503 ScafM SNP 0030.scaffold00117 959799 1 G T scaffold12503 Both SNP 0030.scaffold00117 959803 1 A G scaffold12503 Both SNP 0030.scaffold00117 959838 1 T A scaffold12503 Both SNP 0030.scaffold00117 959882 1 G A scaffold12503 Both SNP 0030.scaffold00117 959904 1 G A scaffold12503 Both SNP 0030.scaffold00117 959918 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 959952 1 C T scaffold12503 ScafM SNP 0030.scaffold00117 959954 1 A T scaffold12503 Both SNP 0030.scaffold00117 959999 1 C T scaffold12503 Both SNP 0030.scaffold00117 960014 1 C T scaffold12503 ScafM SNP 0030.scaffold00117 960075 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 960077 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 960080 1 G A scaffold12503 ScafM SNP 0030.scaffold00117 960106 1 G A scaffold12503 ScafM INDEL 0030.scaffold00117 960143 11 ........... TGCTCGGTTAT scaffold12503 ScafM SNP 0030.scaffold00117 960163 1 A T scaffold12503 ScafM SNP 0030.scaffold00117 960174 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 960184 1 G C scaffold12503 ScafM INDEL 0030.scaffold00117 960234 1 . C scaffold12503 ScafM SNP 0030.scaffold00117 960251 1 T G scaffold12503 ScafM SNP 0030.scaffold00117 960258 1 T A scaffold12503 ScafM SNP 0030.scaffold00117 960261 1 A C scaffold12503 ScafM SNP 0030.scaffold00117 960269 1 C G scaffold12503 ScafM SNP 0030.scaffold00117 960317 1 A T scaffold12503 ScafM INDEL 0030.scaffold00117 960369 1 G . scaffold12503 ScafM SNP 0030.scaffold00117 960396 1 C A scaffold12503 ScafM SNP 0030.scaffold00117 960401 1 C T scaffold12503 ScafM SNP 0030.scaffold00117 960431 1 T G scaffold12503 ScafM SNP 0030.scaffold00117 960452 1 A C scaffold12503 ScafM SNP 0030.scaffold00117 961568 1 T C scaffold12503 ScafM SNP 0030.scaffold00117 961587 1 A C scaffold12503 ScafM SNP 0030.scaffold00117 961602 1 T C scaffold12503 ScafM SNP 0030.scaffold00117 961680 2 TG CC scaffold12503 ScafM SNP 0030.scaffold00117 961740 1 A T scaffold12503 ScafM SNP 0030.scaffold00117 961802 1 G A scaffold12503 ScafM SNP 0030.scaffold00117 961806 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 961838 1 T G scaffold12503 ScafM INDEL 0030.scaffold00117 961895 8 GGCCATAT ........ scaffold12503 ScafM INDEL 0030.scaffold00117 961978 2 .. AA scaffold12503 Both SNP 0030.scaffold00117 961989 1 A G scaffold12503 ScafM SNP 0030.scaffold00117 963780 1 A C scaffold12503 ScafM SNP 0030.scaffold00117 963798 1 G A scaffold12503 ScafM SNP 0030.scaffold00117 963844 1 C T scaffold12503 ScafM SNP 0030.scaffold00117 963852 1 T C scaffold12503 ScafM SNP 0030.scaffold00117 963863 1 G T scaffold12503 ReadM INDEL 0030.scaffold00117 964172 1 G . - ReadM SNP 0030.scaffold00117 964188 1 G T - Both SNP 0030.scaffold00117 964216 1 A G scaffold12503 ScafM INDEL 0030.scaffold00117 964430 2 .A CC scaffold12503 ReadM INDEL 0030.scaffold00117 964431 1 . C - Both SNP 0030.scaffold00117 964557 1 G A scaffold12503 Both SNP 0030.scaffold00117 964621 1 T C scaffold12503 Both SNP 0030.scaffold00117 964645 1 C T scaffold12503 Both SNP 0030.scaffold00117 964769 1 G A scaffold12503 ScafM INDEL 0030.scaffold00117 964823 6 GTTTAG ...... scaffold12503 ScafM INDEL 0030.scaffold00117 964830 1 C . scaffold12503 Both SNP 0030.scaffold00117 964945 1 C G scaffold12503 Both SNP 0030.scaffold00117 965040 1 C G scaffold12503 Both SNP 0030.scaffold00117 965128 1 G T scaffold12503 Both SNP 0030.scaffold00117 965197 1 G A scaffold12503 Both SNP 0030.scaffold00117 966036 1 G A scaffold12503 Both SNP 0030.scaffold00117 966110 1 T C scaffold12503 Both SNP 0030.scaffold00117 966157 1 A G scaffold12503 Both SNP 0030.scaffold00117 966180 1 T C scaffold12503 Both SNP 0030.scaffold00117 966644 1 A G scaffold12503 Both SNP 0030.scaffold00117 966830 1 T C scaffold12503 Both SNP 0030.scaffold00117 966835 1 T C scaffold12503 Both SNP 0030.scaffold00117 967952 1 G A scaffold12503 Both INDEL 0030.scaffold00117 968160 1 T . scaffold12503 ScafM INDEL 0030.scaffold00117 968656 3 ... TTT scaffold12503 ScafM SNP 0030.scaffold00117 968664 1 G A scaffold12503 Both INDEL 0030.scaffold00117 968697 1 . A scaffold12503 Both SNP 0030.scaffold00117 969072 1 A G scaffold12503 Both SNP 0030.scaffold00117 969734 1 A G scaffold12503 Both SNP 0030.scaffold00117 969916 1 T C scaffold12503 Both SNP 0030.scaffold00117 969963 1 A G scaffold12503 Both SNP 0030.scaffold00117 970086 1 G A scaffold12503 Both SNP 0030.scaffold00117 970270 1 A G scaffold12503 ScafM INDEL 0030.scaffold00117 970325 9 ......... GAGCTTGAT scaffold12503 ReadM INDEL 0030.scaffold00117 970494 1 T . - Both INDEL 0030.scaffold00117 970495 2 TA .. scaffold12503 Both SNP 0030.scaffold00117 970507 1 T C scaffold12503 Both SNP 0030.scaffold00117 970649 1 T C scaffold12503 Both SNP 0030.scaffold00117 970793 1 C T scaffold12503 Both SNP 0030.scaffold00117 971004 1 A G scaffold12503 ReadM SNP 0030.scaffold00117 971690 1 A G - ReadM SNP 0030.scaffold00117 971864 1 G A - ReadM SNP 0030.scaffold00117 972606 1 C T - ReadM INDEL 0030.scaffold00117 972925 1 A . - ReadM SNP 0030.scaffold00117 973201 1 A G - Both SNP 0030.scaffold00117 973747 1 G T scaffold12503 Both SNP 0030.scaffold00117 974205 1 A G scaffold12503 Both SNP 0030.scaffold00117 974349 1 T C scaffold12503 Both SNP 0030.scaffold00117 974584 1 C A scaffold12503 Both SNP 0030.scaffold00117 974607 1 G A scaffold12503 Both SNP 0030.scaffold00117 974621 1 T G scaffold12503 Both INDEL 0030.scaffold00117 974739 1 C . scaffold12503 Both SNP 0030.scaffold00117 974903 1 C T scaffold12503 ReadM SNP 0030.scaffold00117 975059 1 T C - Both SNP 0030.scaffold00117 975356 1 G A scaffold12503 Both SNP 0030.scaffold00117 975616 1 A G scaffold12503 ReadM SNP 0030.scaffold00117 975751 1 T G - Both SNP 0030.scaffold00117 975780 1 C T scaffold12503 ReadM SNP 0030.scaffold00117 975846 1 C T - ReadM SNP 0030.scaffold00117 975897 1 A C - ScafM INDEL 0030.scaffold00117 979748 3 TAA ... scaffold11167 Both SNP 0030.scaffold00117 979870 1 A T scaffold11167 ReadM SNP 0030.scaffold00117 980465 1 A G - Both SNP 0030.scaffold00117 981330 1 C T scaffold11167 Both SNP 0030.scaffold00117 981427 1 C T scaffold11167 Both SNP 0030.scaffold00117 981496 1 G A scaffold11167 Both SNP 0030.scaffold00117 981917 1 C T scaffold11167 Both SNP 0030.scaffold00117 982238 1 A G scaffold11167 Both INDEL 0030.scaffold00117 982976 1 . A scaffold11167 ReadM SNP 0030.scaffold00117 983394 1 A G - ReadM INDEL 0030.scaffold00117 983989 2 CG .. - Both SNP 0030.scaffold00117 984135 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 984286 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 984342 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 984344 8 ATAACTTA ....GGGG scaffold11167 ScafM SNP 0030.scaffold00117 984437 1 T C scaffold11167 Both SNP 0030.scaffold00117 984643 1 A G scaffold11167 Both SNP 0030.scaffold00117 984850 1 G A scaffold11167 Both SNP 0030.scaffold00117 984892 1 C T scaffold11167 Both SNP 0030.scaffold00117 985059 1 T A scaffold11167 Both SNP 0030.scaffold00117 985284 1 T G scaffold11167 Both SNP 0030.scaffold00117 986309 1 T C scaffold11167 Both SNP 0030.scaffold00117 986320 1 C A scaffold11167 Both SNP 0030.scaffold00117 986412 1 G A scaffold11167 Both SNP 0030.scaffold00117 986445 1 T C scaffold11167 Both SNP 0030.scaffold00117 986502 1 C T scaffold11167 Both SNP 0030.scaffold00117 986872 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 987633 2 CT TC scaffold11167 ScafM SNP 0030.scaffold00117 987655 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 987676 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 987681 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 987726 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 987732 1 C T scaffold11167 ReadM SNP 0030.scaffold00117 988456 1 G T - ReadM SNP 0030.scaffold00117 989114 1 C A - ReadM SNP 0030.scaffold00117 990353 1 G A - ReadM SNP 0030.scaffold00117 991076 1 A G - ReadM INDEL 0030.scaffold00117 991128 1 T . - ReadM SNP 0030.scaffold00117 991567 1 C T - ReadM SNP 0030.scaffold00117 991591 1 C T - Both SNP 0030.scaffold00117 991993 1 C A scaffold11167 ReadM SNP 0030.scaffold00117 992279 1 A C - ReadM SNP 0030.scaffold00117 994166 1 C T - ReadM SNP 0030.scaffold00117 994373 1 G A - ReadM SNP 0030.scaffold00117 994387 1 G A - Both SNP 0030.scaffold00117 994532 1 C A scaffold11167 ReadM SNP 0030.scaffold00117 994781 1 A G - ReadM SNP 0030.scaffold00117 995908 1 A G - ReadM SNP 0030.scaffold00117 995961 1 A G - ReadM SNP 0030.scaffold00117 996008 1 T C - ReadM SNP 0030.scaffold00117 996666 1 A G - ReadM INDEL 0030.scaffold00117 996969 1 . A - ScafM SNP 0030.scaffold00117 997200 1 G T scaffold11167 ScafM INDEL 0030.scaffold00117 998720 5 AAAAC ..... scaffold10839 ScafM INDEL 0030.scaffold00117 998726 2 GA .. scaffold10839 ScafM SNP 0030.scaffold00117 998732 1 T C scaffold10839 ScafM INDEL 0030.scaffold00117 998735 1 . T scaffold10839 ScafM SNP 0030.scaffold00117 998737 1 C A scaffold10839 ScafM SNP 0030.scaffold00117 998779 1 C T scaffold10839 ScafM SNP 0030.scaffold00117 998798 1 C A scaffold10839 ScafM INDEL 0030.scaffold00117 998811 3 .AC TTT scaffold10839 ReadM INDEL 0030.scaffold00117 999931 1 . T - ReadM SNP 0030.scaffold00117 999961 1 A T - ReadM SNP 0030.scaffold00117 1000229 1 G A - ReadM SNP 0030.scaffold00117 1000390 1 G C - ReadM SNP 0030.scaffold00117 1000402 1 T C - ReadM SNP 0030.scaffold00117 1000474 1 T G - ReadM SNP 0030.scaffold00117 1000480 1 T C - ReadM SNP 0030.scaffold00117 1000579 1 C G - ReadM SNP 0030.scaffold00117 1000643 1 C T - ReadM SNP 0030.scaffold00117 1001079 1 C T - ReadM SNP 0030.scaffold00117 1001104 1 C G - ReadM SNP 0030.scaffold00117 1001284 1 G T - ReadM SNP 0030.scaffold00117 1001289 1 A T - ReadM SNP 0030.scaffold00117 1001348 1 C T - ReadM SNP 0030.scaffold00117 1001583 1 T C - ScafM SNP 0030.scaffold00117 1001890 1 T C scaffold11167 Both SNP 0030.scaffold00117 1002405 1 G A scaffold11167 Both SNP 0030.scaffold00117 1002555 1 C A scaffold11167 Both INDEL 0030.scaffold00117 1002565 1 . T scaffold11167 Both SNP 0030.scaffold00117 1002674 1 G A scaffold11167 Both SNP 0030.scaffold00117 1002821 1 A G scaffold11167 Both SNP 0030.scaffold00117 1002963 1 A G scaffold11167 Both SNP 0030.scaffold00117 1003037 1 A G scaffold11167 Both SNP 0030.scaffold00117 1003198 1 A G scaffold11167 Both SNP 0030.scaffold00117 1003223 1 C T scaffold11167 Both SNP 0030.scaffold00117 1003234 1 C A scaffold11167 ScafM INDEL 0030.scaffold00117 1003302 2 .G AA scaffold11167 ScafM SNP 0030.scaffold00117 1003467 1 A G scaffold11167 Both SNP 0030.scaffold00117 1003704 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1004014 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1004050 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1004169 1 T C scaffold11167 ReadM SNP 0030.scaffold00117 1004883 1 A C - ReadM SNP 0030.scaffold00117 1004914 1 G T - ReadM SNP 0030.scaffold00117 1004938 1 T A - ReadM SNP 0030.scaffold00117 1005063 1 T G - ReadM SNP 0030.scaffold00117 1005398 1 T C - ReadM SNP 0030.scaffold00117 1006453 1 C T - ReadM SNP 0030.scaffold00117 1006697 1 C A - ReadM SNP 0030.scaffold00117 1006722 1 G A - ReadM SNP 0030.scaffold00117 1006927 1 T C - ReadM SNP 0030.scaffold00117 1007093 1 A G - ReadM SNP 0030.scaffold00117 1007121 1 G A - ReadM SNP 0030.scaffold00117 1007643 1 G A - ReadM SNP 0030.scaffold00117 1007656 1 G T - ReadM SNP 0030.scaffold00117 1007784 1 A G - ReadM SNP 0030.scaffold00117 1007835 1 A G - ReadM SNP 0030.scaffold00117 1007904 1 C T - ReadM SNP 0030.scaffold00117 1008239 1 A G - ReadM INDEL 0030.scaffold00117 1008310 1 A . - ReadM SNP 0030.scaffold00117 1008488 1 G A - ReadM INDEL 0030.scaffold00117 1008539 3 TAG ... - Both SNP 0030.scaffold00117 1008640 1 G C scaffold11167 Both SNP 0030.scaffold00117 1008899 1 A T scaffold11167 ScafM INDEL 0030.scaffold00117 1008939 3 ... TTT scaffold11167 Both SNP 0030.scaffold00117 1009043 1 C G scaffold11167 ReadM SNP 0030.scaffold00117 1009595 1 A G - ReadM SNP 0030.scaffold00117 1009613 1 T C - Both SNP 0030.scaffold00117 1009702 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 1009747 5 ..... AGTTT scaffold11167 ScafM SNP 0030.scaffold00117 1009754 1 C G scaffold11167 Both SNP 0030.scaffold00117 1009769 1 G A scaffold11167 Both SNP 0030.scaffold00117 1009777 1 A G scaffold11167 Both SNP 0030.scaffold00117 1009796 1 T G scaffold11167 ScafM INDEL 0030.scaffold00117 1009863 57 ......................................................... CTTTTAGGATATCCGAACAAAGCAGTTACCTTTTCTTATCTAGTAATGGCTTATGAT scaffold11167 Both SNP 0030.scaffold00117 1009883 1 T G scaffold11167 Both SNP 0030.scaffold00117 1009984 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1010002 2 .. TT scaffold11167 Both SNP 0030.scaffold00117 1010020 1 A G scaffold11167 Both SNP 0030.scaffold00117 1010050 1 G A scaffold11167 Both SNP 0030.scaffold00117 1010072 1 C A scaffold11167 Both SNP 0030.scaffold00117 1010255 1 T A scaffold11167 Both SNP 0030.scaffold00117 1010324 1 T C scaffold11167 Both SNP 0030.scaffold00117 1010333 1 T C scaffold11167 Both SNP 0030.scaffold00117 1010362 1 A G scaffold11167 Both SNP 0030.scaffold00117 1010437 1 G C scaffold11167 Both SNP 0030.scaffold00117 1010462 1 T A scaffold11167 Both SNP 0030.scaffold00117 1010526 1 T A scaffold11167 Both SNP 0030.scaffold00117 1010557 1 A T scaffold11167 Both SNP 0030.scaffold00117 1010567 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1010665 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1010692 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1010701 1 T A scaffold11167 ScafM INDEL 0030.scaffold00117 1010762 29 GTATTCAGTTGTTGCCTTCCGGATTAAAC ............................. scaffold11167 ScafM SNP 0030.scaffold00117 1010801 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1010845 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1010980 1 C G scaffold11167 ScafM INDEL 0030.scaffold00117 1011083 1 C . scaffold11167 ScafM INDEL 0030.scaffold00117 1011085 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1011145 2 AA CC scaffold11167 ScafM SNP 0030.scaffold00117 1011150 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1011152 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1011293 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1011490 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1011573 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1011703 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1011789 9 CTGTGTTTT ......... scaffold11167 ScafM SNP 0030.scaffold00117 1011860 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1011900 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1011917 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1011934 1 T C scaffold11167 ReadM SNP 0030.scaffold00117 1012436 1 T G - ReadM INDEL 0030.scaffold00117 1012512 1 A . - ReadM SNP 0030.scaffold00117 1012540 1 C T - ScafM INDEL 0030.scaffold00117 1013075 2 .C GG scaffold11167 Both SNP 0030.scaffold00117 1013120 1 T C scaffold11167 Both SNP 0030.scaffold00117 1013122 1 T C scaffold11167 Both SNP 0030.scaffold00117 1013164 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1013250 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1013294 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1013308 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1013322 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1013396 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1013399 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1013549 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1013553 2 TA .. scaffold11167 ScafM SNP 0030.scaffold00117 1013559 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1013567 2 GT .. scaffold11167 Both SNP 0030.scaffold00117 1013622 1 A G scaffold11167 Both SNP 0030.scaffold00117 1013662 1 A G scaffold11167 Both SNP 0030.scaffold00117 1013749 1 G T scaffold11167 Both SNP 0030.scaffold00117 1013772 1 A C scaffold11167 Both SNP 0030.scaffold00117 1013813 1 A T scaffold11167 Both SNP 0030.scaffold00117 1013850 1 A T scaffold11167 Both SNP 0030.scaffold00117 1013855 1 T C scaffold11167 Both SNP 0030.scaffold00117 1013896 1 G A scaffold11167 Both SNP 0030.scaffold00117 1013964 1 T C scaffold11167 Both SNP 0030.scaffold00117 1014006 1 T G scaffold11167 Both SNP 0030.scaffold00117 1014096 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1014126 9 TAAATTTAC ......... scaffold11167 ScafM INDEL 0030.scaffold00117 1014170 3 ATG ... scaffold11167 ScafM INDEL 0030.scaffold00117 1014174 2 CA .. scaffold11167 Both INDEL 0030.scaffold00117 1014185 1 G . scaffold11167 Both SNP 0030.scaffold00117 1014222 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1014317 2 TC GT scaffold11167 Both SNP 0030.scaffold00117 1014347 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1014416 8 GGCTTTGA ........ scaffold11167 Both SNP 0030.scaffold00117 1014448 1 G A scaffold11167 Both SNP 0030.scaffold00117 1014466 1 A G scaffold11167 Both INDEL 0030.scaffold00117 1014541 1 . T scaffold11167 ScafM SNP 0030.scaffold00117 1014545 1 C T scaffold11167 Both SNP 0030.scaffold00117 1014597 1 G A scaffold11167 Both INDEL 0030.scaffold00117 1014688 3 TTT ... scaffold11167 Both SNP 0030.scaffold00117 1014755 1 G A scaffold11167 Both SNP 0030.scaffold00117 1014843 1 G T scaffold11167 Both SNP 0030.scaffold00117 1014990 1 C T scaffold11167 Both SNP 0030.scaffold00117 1015026 1 A C scaffold11167 Both SNP 0030.scaffold00117 1015051 1 T G scaffold11167 ScafM INDEL 0030.scaffold00117 1015075 8 ........ AGTGGGTC scaffold11167 ScafM SNP 0030.scaffold00117 1015078 1 T C scaffold11167 Both SNP 0030.scaffold00117 1015178 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1015261 2 .. GT scaffold11167 Both INDEL 0030.scaffold00117 1015338 1 . T scaffold11167 Both SNP 0030.scaffold00117 1015412 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1015579 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1015584 2 CA TG scaffold11167 Both SNP 0030.scaffold00117 1015597 1 C G scaffold11167 Both SNP 0030.scaffold00117 1015721 1 G A scaffold11167 Both SNP 0030.scaffold00117 1015733 1 A T scaffold11167 Both SNP 0030.scaffold00117 1015759 1 T G scaffold11167 Both SNP 0030.scaffold00117 1015779 1 C T scaffold11167 Both SNP 0030.scaffold00117 1015897 1 T G scaffold11167 Both SNP 0030.scaffold00117 1015987 1 T A scaffold11167 Both SNP 0030.scaffold00117 1016009 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1016086 3 ... TTT scaffold11167 Both SNP 0030.scaffold00117 1016129 1 A G scaffold11167 Both SNP 0030.scaffold00117 1016147 1 A C scaffold11167 Both INDEL 0030.scaffold00117 1016228 1 . G scaffold11167 Both SNP 0030.scaffold00117 1016273 1 G A scaffold11167 Both INDEL 0030.scaffold00117 1016472 3 ... TAA scaffold11167 ScafM SNP 0030.scaffold00117 1016614 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1016616 1 G A scaffold11167 Both SNP 0030.scaffold00117 1016695 1 G T scaffold11167 Both SNP 0030.scaffold00117 1016919 1 G A scaffold11167 Both SNP 0030.scaffold00117 1017040 1 C T scaffold11167 Both SNP 0030.scaffold00117 1017169 1 A G scaffold11167 Both SNP 0030.scaffold00117 1017179 1 G A scaffold11167 Both SNP 0030.scaffold00117 1017256 1 G A scaffold11167 Both SNP 0030.scaffold00117 1017458 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1017507 2 TG AT scaffold11167 ScafM INDEL 0030.scaffold00117 1017511 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1017515 1 A C scaffold11167 Both SNP 0030.scaffold00117 1017559 1 C A scaffold11167 Both SNP 0030.scaffold00117 1017594 1 T C scaffold11167 Both SNP 0030.scaffold00117 1017646 1 T A scaffold11167 Both SNP 0030.scaffold00117 1017665 1 G C scaffold11167 Both SNP 0030.scaffold00117 1017825 1 T A scaffold11167 Both SNP 0030.scaffold00117 1017928 1 A G scaffold11167 Both SNP 0030.scaffold00117 1017959 1 G C scaffold11167 ReadM SNP 0030.scaffold00117 1018073 1 C G - ReadM SNP 0030.scaffold00117 1018120 1 C T - ReadM INDEL 0030.scaffold00117 1018237 1 . T - ReadM SNP 0030.scaffold00117 1018251 1 T C - ReadM SNP 0030.scaffold00117 1018591 1 G A - ReadM SNP 0030.scaffold00117 1018655 1 G A - ScafM SNP 0030.scaffold00117 1018723 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1018727 7 ....... TTATGAG scaffold11167 ScafM INDEL 0030.scaffold00117 1018728 1 . G scaffold11167 Both SNP 0030.scaffold00117 1018746 1 T C scaffold11167 Both SNP 0030.scaffold00117 1018783 1 A T scaffold11167 Both SNP 0030.scaffold00117 1018789 1 C G scaffold11167 Both SNP 0030.scaffold00117 1018946 1 A G scaffold11167 Both SNP 0030.scaffold00117 1019063 1 G A scaffold11167 Both SNP 0030.scaffold00117 1019071 1 T C scaffold11167 Both SNP 0030.scaffold00117 1019107 1 G A scaffold11167 Both SNP 0030.scaffold00117 1019112 1 T C scaffold11167 Both SNP 0030.scaffold00117 1019134 1 A T scaffold11167 Both INDEL 0030.scaffold00117 1019214 2 .. AG scaffold11167 Both SNP 0030.scaffold00117 1019314 1 C T scaffold11167 Both SNP 0030.scaffold00117 1019456 1 T C scaffold11167 Both INDEL 0030.scaffold00117 1019500 1 G . scaffold11167 Both SNP 0030.scaffold00117 1019636 1 C G scaffold11167 Both SNP 0030.scaffold00117 1019645 1 A C scaffold11167 Both SNP 0030.scaffold00117 1019813 1 C G scaffold11167 Both INDEL 0030.scaffold00117 1019834 1 G . scaffold11167 Both SNP 0030.scaffold00117 1019854 1 C T scaffold11167 Both SNP 0030.scaffold00117 1019918 1 G A scaffold11167 Both SNP 0030.scaffold00117 1019942 1 T C scaffold11167 Both SNP 0030.scaffold00117 1020032 2 GC AA scaffold11167 Both SNP 0030.scaffold00117 1020220 1 C T scaffold11167 Both SNP 0030.scaffold00117 1020248 1 C G scaffold11167 Both SNP 0030.scaffold00117 1020274 1 A C scaffold11167 Both SNP 0030.scaffold00117 1020376 1 G A scaffold11167 Both SNP 0030.scaffold00117 1020443 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1020537 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1020541 8 CCTCAAGG ........ scaffold11167 Both SNP 0030.scaffold00117 1020569 1 A T scaffold11167 ScafM INDEL 0030.scaffold00117 1020692 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1020695 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1020697 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1020705 1 G T scaffold11167 Both SNP 0030.scaffold00117 1020797 1 C T scaffold11167 Both SNP 0030.scaffold00117 1020881 1 G T scaffold11167 Both SNP 0030.scaffold00117 1020910 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1020924 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1020932 1 A T scaffold11167 Both SNP 0030.scaffold00117 1020953 1 C G scaffold11167 Both SNP 0030.scaffold00117 1021009 1 T A scaffold11167 Both SNP 0030.scaffold00117 1021063 1 G A scaffold11167 Both SNP 0030.scaffold00117 1021114 1 A G scaffold11167 Both SNP 0030.scaffold00117 1021160 1 A G scaffold11167 Both SNP 0030.scaffold00117 1021234 1 C T scaffold11167 Both SNP 0030.scaffold00117 1021292 1 C T scaffold11167 Both SNP 0030.scaffold00117 1021425 1 G T scaffold11167 Both SNP 0030.scaffold00117 1021471 1 A T scaffold11167 Both SNP 0030.scaffold00117 1021501 1 C T scaffold11167 Both SNP 0030.scaffold00117 1021665 1 T A scaffold11167 Both SNP 0030.scaffold00117 1021852 1 G A scaffold11167 Both SNP 0030.scaffold00117 1021863 1 T G scaffold11167 Both SNP 0030.scaffold00117 1021903 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1021935 2 .. TT scaffold11167 Both INDEL 0030.scaffold00117 1021966 2 .. AG scaffold11167 Both SNP 0030.scaffold00117 1022033 1 A G scaffold11167 Both INDEL 0030.scaffold00117 1022070 1 . T scaffold11167 Both SNP 0030.scaffold00117 1022121 1 G A scaffold11167 Both SNP 0030.scaffold00117 1022134 1 A T scaffold11167 Both SNP 0030.scaffold00117 1022260 1 G T scaffold11167 Both SNP 0030.scaffold00117 1022301 1 T G scaffold11167 Both SNP 0030.scaffold00117 1022439 1 T G scaffold11167 Both SNP 0030.scaffold00117 1022448 1 T C scaffold11167 Both SNP 0030.scaffold00117 1022483 1 T C scaffold11167 Both SNP 0030.scaffold00117 1022537 1 G A scaffold11167 Both SNP 0030.scaffold00117 1022775 1 A T scaffold11167 Both SNP 0030.scaffold00117 1023050 1 C T scaffold11167 Both SNP 0030.scaffold00117 1023055 1 G A scaffold11167 Both SNP 0030.scaffold00117 1023149 1 C T scaffold11167 Both SNP 0030.scaffold00117 1023179 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1023334 1 G C scaffold11167 ScafM INDEL 0030.scaffold00117 1023418 23 ACCTTTGCTTGACCTCCTAAATC ....................... scaffold11167 ScafM SNP 0030.scaffold00117 1023978 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1024133 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1024142 3 ... AAA scaffold11167 ScafM INDEL 0030.scaffold00117 1024169 1 . T scaffold11167 Both INDEL 0030.scaffold00117 1024418 1 . C scaffold11167 Both SNP 0030.scaffold00117 1024468 1 A T scaffold11167 Both SNP 0030.scaffold00117 1024487 1 C T scaffold11167 Both SNP 0030.scaffold00117 1024810 1 A G scaffold11167 Both SNP 0030.scaffold00117 1024987 1 A G scaffold11167 Both SNP 0030.scaffold00117 1025165 1 G A scaffold11167 ReadM INDEL 0030.scaffold00117 1025177 1 A . - ScafM INDEL 0030.scaffold00117 1025177 2 AT .C scaffold11167 Both SNP 0030.scaffold00117 1025356 1 A T scaffold11167 Both SNP 0030.scaffold00117 1025363 1 C A scaffold11167 Both SNP 0030.scaffold00117 1025437 1 G C scaffold11167 Both SNP 0030.scaffold00117 1025491 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1025563 1 C . scaffold11167 ScafM INDEL 0030.scaffold00117 1025569 1 A . scaffold11167 ScafM SNP 0030.scaffold00117 1025573 1 A G scaffold11167 Both SNP 0030.scaffold00117 1025661 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1025706 1 T A scaffold11167 ScafM INDEL 0030.scaffold00117 1025719 3 CCC ..T scaffold11167 ScafM SNP 0030.scaffold00117 1025723 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1025727 2 AA CT scaffold11167 ScafM SNP 0030.scaffold00117 1025731 1 T G scaffold11167 ScafM INDEL 0030.scaffold00117 1025734 3 CCT ... scaffold11167 ScafM SNP 0030.scaffold00117 1025810 1 A G scaffold11167 Both INDEL 0030.scaffold00117 1025832 2 AG .. scaffold11167 Both SNP 0030.scaffold00117 1025853 1 G T scaffold11167 Both SNP 0030.scaffold00117 1025963 1 T G scaffold11167 Both SNP 0030.scaffold00117 1026014 1 A G scaffold11167 Both SNP 0030.scaffold00117 1026020 1 T G scaffold11167 Both SNP 0030.scaffold00117 1026031 1 T C scaffold11167 Both SNP 0030.scaffold00117 1026114 1 T C scaffold11167 Both SNP 0030.scaffold00117 1026116 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1026150 31 ............................... ATACCGGTCCTGCAACATCGAAAAACATTAC scaffold11167 Both INDEL 0030.scaffold00117 1026228 1 . A scaffold11167 Both SNP 0030.scaffold00117 1026270 1 A T scaffold11167 Both SNP 0030.scaffold00117 1026303 1 G A scaffold11167 Both SNP 0030.scaffold00117 1026355 1 C T scaffold11167 ReadM SNP 0030.scaffold00117 1026423 1 A G - ReadM SNP 0030.scaffold00117 1026449 1 C T - Both SNP 0030.scaffold00117 1026553 1 A G scaffold11167 ReadM SNP 0030.scaffold00117 1026608 1 C T - Both INDEL 0030.scaffold00117 1026981 2 .. AA scaffold11167 ScafM SNP 0030.scaffold00117 1026988 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1027001 1 A T scaffold11167 ScafM INDEL 0030.scaffold00117 1027012 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1027060 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1027071 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1027078 1 A G scaffold11167 Both SNP 0030.scaffold00117 1027088 1 T C scaffold11167 Both SNP 0030.scaffold00117 1027211 1 A G scaffold11167 Both SNP 0030.scaffold00117 1027225 1 C T scaffold11167 Both SNP 0030.scaffold00117 1027318 1 T C scaffold11167 Both SNP 0030.scaffold00117 1027531 1 C G scaffold11167 Both INDEL 0030.scaffold00117 1027702 1 . G scaffold11167 Both SNP 0030.scaffold00117 1027862 1 A C scaffold11167 Both SNP 0030.scaffold00117 1027906 1 G A scaffold11167 Both SNP 0030.scaffold00117 1027917 1 A G scaffold11167 Both INDEL 0030.scaffold00117 1028062 1 T . scaffold11167 Both SNP 0030.scaffold00117 1028089 1 T C scaffold11167 Both SNP 0030.scaffold00117 1028126 1 G A scaffold11167 Both SNP 0030.scaffold00117 1028226 1 A G scaffold11167 Both SNP 0030.scaffold00117 1028329 1 A C scaffold11167 Both SNP 0030.scaffold00117 1028420 1 T G scaffold11167 Both SNP 0030.scaffold00117 1028540 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1028595 2 GG TT scaffold11167 ScafM SNP 0030.scaffold00117 1028599 2 CC TT scaffold11167 ScafM INDEL 0030.scaffold00117 1028602 3 AGC ... scaffold11167 ScafM INDEL 0030.scaffold00117 1028607 6 GAACCA .....T scaffold11167 ScafM SNP 0030.scaffold00117 1028616 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1028658 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 1028683 3 AGC ... scaffold11167 ScafM INDEL 0030.scaffold00117 1028753 2 .. AA scaffold11167 ScafM SNP 0030.scaffold00117 1028755 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1028856 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1028867 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1028893 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1028896 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1028922 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1028931 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1029355 1 A G scaffold11167 ReadM SNP 0030.scaffold00117 1029445 1 C T - ReadM SNP 0030.scaffold00117 1029515 1 T C - ReadM SNP 0030.scaffold00117 1029519 1 T G - ReadM SNP 0030.scaffold00117 1029574 1 A C - ReadM SNP 0030.scaffold00117 1029588 1 A G - ReadM SNP 0030.scaffold00117 1029609 1 C T - ReadM SNP 0030.scaffold00117 1029887 1 G A - ReadM SNP 0030.scaffold00117 1029927 1 C A - ReadM SNP 0030.scaffold00117 1029983 1 C T - ReadM SNP 0030.scaffold00117 1029996 1 C T - ReadM SNP 0030.scaffold00117 1030111 1 G C - ReadM SNP 0030.scaffold00117 1030164 1 G T - ScafM SNP 0030.scaffold00117 1030226 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1030257 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1030260 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1030481 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1030510 1 C T scaffold11167 Both SNP 0030.scaffold00117 1030571 1 C T scaffold11167 Both SNP 0030.scaffold00117 1030589 1 T A scaffold11167 Both SNP 0030.scaffold00117 1030633 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1030673 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1030680 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1030686 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1030700 2 CA GT scaffold11167 ScafM SNP 0030.scaffold00117 1030711 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1030714 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1030729 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1030734 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1030738 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1030742 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1030748 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1039119 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1039143 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1039146 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1039150 2 TT .. scaffold11167 ScafM SNP 0030.scaffold00117 1039175 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1039183 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1039193 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1039205 3 ... TGG scaffold11167 ScafM SNP 0030.scaffold00117 1039210 2 TT GG scaffold11167 ScafM SNP 0030.scaffold00117 1039231 1 G A scaffold11167 ReadM SNP 0030.scaffold00117 1039312 1 A C - ReadM SNP 0030.scaffold00117 1039514 1 G A - ReadM SNP 0030.scaffold00117 1039527 1 A T - Both SNP 0030.scaffold00117 1039718 1 G A scaffold11167 Both SNP 0030.scaffold00117 1039762 1 T G scaffold11167 Both SNP 0030.scaffold00117 1039789 1 G T scaffold11167 Both SNP 0030.scaffold00117 1039830 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1039863 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1039865 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1039880 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1039886 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1039888 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1039899 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1039908 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1039956 1 C T scaffold11167 ReadM SNP 0030.scaffold00117 1040029 1 A G - ReadM SNP 0030.scaffold00117 1040046 1 A G - ReadM SNP 0030.scaffold00117 1040120 1 A G - ReadM SNP 0030.scaffold00117 1040133 1 A C - ScafM SNP 0030.scaffold00117 1040469 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1040471 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1040495 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1040557 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1040643 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1040653 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1040712 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1040716 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1041003 1 C A scaffold26721 ScafM SNP 0030.scaffold00117 1041070 1 A C scaffold26721 ScafM INDEL 0030.scaffold00117 1041114 2 TA .. scaffold26721 ScafM SNP 0030.scaffold00117 1041246 1 T C scaffold26721 ScafM INDEL 0030.scaffold00117 1041276 3 TTA ... scaffold26721 ScafM INDEL 0030.scaffold00117 1041336 1 . A scaffold26721 ScafM INDEL 0030.scaffold00117 1041392 1 T . scaffold26721 ScafM SNP 0030.scaffold00117 1041416 1 T C scaffold26721 ScafM SNP 0030.scaffold00117 1041423 1 T C scaffold26721 ReadM SNP 0030.scaffold00117 1048105 1 A G - ReadM SNP 0030.scaffold00117 1048665 1 A G - ScafM SNP 0030.scaffold00117 1048679 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1048684 1 T G scaffold11167 Both SNP 0030.scaffold00117 1048719 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1048737 2 CA TT scaffold11167 ScafM SNP 0030.scaffold00117 1048741 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1048771 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1048793 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1048812 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1048824 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1048840 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1048877 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1048886 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1048895 1 A . scaffold11167 ScafM SNP 0030.scaffold00117 1048904 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1048927 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1048931 2 .T CA scaffold11167 ScafM SNP 0030.scaffold00117 1048989 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1048999 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1049030 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1049041 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1049063 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1049072 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1049141 2 CT TC scaffold11167 ScafM SNP 0030.scaffold00117 1049202 1 T A scaffold11167 ScafM INDEL 0030.scaffold00117 1049210 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1049213 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1049243 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1049513 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1049532 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1049535 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1049557 1 C G scaffold11167 ScafM INDEL 0030.scaffold00117 1049563 5 CCTTC ..... scaffold11167 ScafM SNP 0030.scaffold00117 1049576 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1049584 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1049612 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1049622 2 GA CG scaffold11167 ScafM SNP 0030.scaffold00117 1049683 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1049727 1 G T scaffold11167 ScafM INDEL 0030.scaffold00117 1049759 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1049765 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1049798 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1049813 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1049836 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1049842 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1049890 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1049894 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1049923 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1049944 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1049964 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1049987 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1050009 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1050044 1 A G scaffold11167 ReadM SNP 0030.scaffold00117 1050227 1 G C - ScafM INDEL 0030.scaffold00117 1050309 1 . T scaffold11167 ScafM SNP 0030.scaffold00117 1050379 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1050385 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1050419 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1050426 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1050430 1 T . scaffold11167 ReadM SNP 0030.scaffold00117 1050702 1 A G - ReadM SNP 0030.scaffold00117 1050762 1 T C - ReadM SNP 0030.scaffold00117 1051661 1 A G - ReadM SNP 0030.scaffold00117 1052032 1 C T - ReadM SNP 0030.scaffold00117 1052133 1 G A - ScafM SNP 0030.scaffold00117 1052929 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1052948 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1052950 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1053013 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1053018 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1053033 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1053054 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1053107 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1053110 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1053119 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1053125 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1053145 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1053148 2 GG TA scaffold11167 ScafM SNP 0030.scaffold00117 1053161 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1053504 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1053514 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1053526 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1053564 1 C G scaffold11167 ReadM SNP 0030.scaffold00117 1067123 1 A G - ReadM SNP 0030.scaffold00117 1067148 1 T C - ReadM SNP 0030.scaffold00117 1067197 1 T G - ReadM SNP 0030.scaffold00117 1067367 1 G T - ReadM SNP 0030.scaffold00117 1067379 1 A C - Both SNP 0030.scaffold00117 1067432 1 C T scaffold11167 Both SNP 0030.scaffold00117 1067666 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1067812 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1067823 1 C A scaffold11167 Both SNP 0030.scaffold00117 1067907 1 C A scaffold11167 Both SNP 0030.scaffold00117 1067970 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1068017 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1068063 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1068071 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1068076 7 ....... ATAATAA scaffold11167 ScafM INDEL 0030.scaffold00117 1068108 8 ........ ACTATCCA scaffold11167 ScafM INDEL 0030.scaffold00117 1068126 5 AGTTG ..... scaffold11167 ScafM INDEL 0030.scaffold00117 1068133 5 GAAAC ..... scaffold11167 ScafM INDEL 0030.scaffold00117 1068571 30 .............................. TATATATTTTTTAAGAGACATAACATTATA scaffold11167 ScafM SNP 0030.scaffold00117 1068604 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1068607 1 T C scaffold11167 Both SNP 0030.scaffold00117 1068627 1 G A scaffold11167 Both SNP 0030.scaffold00117 1068683 1 T C scaffold11167 Both SNP 0030.scaffold00117 1068705 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1068747 2 TA GG scaffold11167 ScafM SNP 0030.scaffold00117 1068813 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1068846 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1068880 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1068884 1 C A scaffold11167 Both SNP 0030.scaffold00117 1068930 1 C G scaffold11167 ScafM INDEL 0030.scaffold00117 1069035 8 ........ TCACATCT scaffold11167 Both SNP 0030.scaffold00117 1069053 1 C A scaffold11167 ReadM SNP 0030.scaffold00117 1069099 1 T C - ReadM SNP 0030.scaffold00117 1069157 1 A G - ReadM SNP 0030.scaffold00117 1069201 1 G C - ScafM INDEL 0030.scaffold00117 1069346 3 ACG ... scaffold11167 ScafM INDEL 0030.scaffold00117 1069351 3 CCA ... scaffold11167 ScafM INDEL 0030.scaffold00117 1069357 2 GA .. scaffold11167 ScafM INDEL 0030.scaffold00117 1069362 4 ACTT .... scaffold11167 ScafM INDEL 0030.scaffold00117 1069369 46 TCTTTTTTACTTGGTTGCCATTTCGGAAATTGCCAACTTGAGATTA .............................................. scaffold11167 ScafM INDEL 0030.scaffold00117 1069417 1 T . scaffold11167 ScafM INDEL 0030.scaffold00117 1069423 12 ATTCGACAAACC ............ scaffold11167 Both SNP 0030.scaffold00117 1069532 1 T C scaffold11167 Both SNP 0030.scaffold00117 1069552 1 G C scaffold11167 Both SNP 0030.scaffold00117 1069556 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1069593 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1069595 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1069598 1 T C scaffold11167 ReadM SNP 0030.scaffold00117 1069644 1 T G - ReadM SNP 0030.scaffold00117 1069667 1 A G - ScafM SNP 0030.scaffold00117 1069766 2 CA AG scaffold11167 Both SNP 0030.scaffold00117 1069879 1 C T scaffold11167 Both SNP 0030.scaffold00117 1069935 1 G A scaffold11167 Both SNP 0030.scaffold00117 1069978 1 C T scaffold11167 Both SNP 0030.scaffold00117 1070012 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1070035 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1070037 3 ... GAA scaffold11167 Both SNP 0030.scaffold00117 1070315 1 T C scaffold11167 Both SNP 0030.scaffold00117 1070428 2 GG CA scaffold11167 Both SNP 0030.scaffold00117 1070569 1 C A scaffold11167 Both SNP 0030.scaffold00117 1070659 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1070681 1 . T scaffold11167 ScafM SNP 0030.scaffold00117 1070685 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1070687 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1070693 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1070708 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1070725 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1070745 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1070781 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1070790 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1070794 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1070796 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1070831 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1070879 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1070935 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1070940 3 CCA ... scaffold11167 ScafM SNP 0030.scaffold00117 1070972 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1071008 2 TG CA scaffold11167 ScafM SNP 0030.scaffold00117 1071013 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1071780 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1071786 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1071794 4 TTAA .... scaffold11167 ScafM SNP 0030.scaffold00117 1071818 1 G T scaffold11167 ScafM SNP 0030.scaffold00117 1071857 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1071869 1 C G scaffold11167 ScafM INDEL 0030.scaffold00117 1071893 4 .... TCTT scaffold11167 ScafM SNP 0030.scaffold00117 1071899 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1071902 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1071945 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1071961 3 CAC AGT scaffold11167 ScafM SNP 0030.scaffold00117 1071974 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1071985 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1072026 49 ................................................. ACCAAGCTACAAGGCTAATCAACACAACTTGAAGGAAATTCAAGAGATC scaffold11167 ScafM INDEL 0030.scaffold00117 1072027 8 ........ TCTTCTAA scaffold11167 ScafM SNP 0030.scaffold00117 1072058 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1072109 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1072111 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1072116 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1072140 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1072159 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1072197 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1072203 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1072215 2 TC AA scaffold11167 Both SNP 0030.scaffold00117 1072241 1 A G scaffold11167 Both SNP 0030.scaffold00117 1072270 1 C A scaffold11167 Both INDEL 0030.scaffold00117 1072286 1 G . scaffold11167 ScafM SNP 0030.scaffold00117 1072487 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1072495 3 AAG ... scaffold11167 Both SNP 0030.scaffold00117 1072551 1 T C scaffold11167 Both SNP 0030.scaffold00117 1072614 1 C T scaffold11167 ScafM INDEL 0030.scaffold00117 1072639 3 ... ATT scaffold11167 ScafM SNP 0030.scaffold00117 1072641 1 G T scaffold11167 Both SNP 0030.scaffold00117 1072690 1 C A scaffold11167 Both INDEL 0030.scaffold00117 1072711 1 T . scaffold11167 Both SNP 0030.scaffold00117 1072766 1 T C scaffold11167 Both SNP 0030.scaffold00117 1072858 1 A G scaffold11167 Both SNP 0030.scaffold00117 1072887 1 G A scaffold11167 Both INDEL 0030.scaffold00117 1072889 1 . A scaffold11167 ScafM SNP 0030.scaffold00117 1072891 1 T A scaffold11167 Both SNP 0030.scaffold00117 1072975 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1072998 1 A . scaffold11167 Both INDEL 0030.scaffold00117 1073009 1 . A scaffold11167 Both SNP 0030.scaffold00117 1073071 1 C G scaffold11167 Both SNP 0030.scaffold00117 1073124 1 C T scaffold11167 Both SNP 0030.scaffold00117 1073160 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1073197 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1073199 3 GGT ... scaffold11167 Both SNP 0030.scaffold00117 1073225 1 T C scaffold11167 Both SNP 0030.scaffold00117 1073247 1 C G scaffold11167 Both SNP 0030.scaffold00117 1073288 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073351 1 C G scaffold11167 Both SNP 0030.scaffold00117 1073392 1 T G scaffold11167 Both INDEL 0030.scaffold00117 1073427 1 C . scaffold11167 Both SNP 0030.scaffold00117 1073475 1 G A scaffold11167 Both SNP 0030.scaffold00117 1073549 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073551 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073600 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073635 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073639 1 C A scaffold11167 Both SNP 0030.scaffold00117 1073692 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073734 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073762 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 1073780 2 CC .A scaffold11167 Both INDEL 0030.scaffold00117 1073818 1 G . scaffold11167 Both SNP 0030.scaffold00117 1073898 1 A G scaffold11167 Both SNP 0030.scaffold00117 1073929 1 T C scaffold11167 Both SNP 0030.scaffold00117 1073939 1 A T scaffold11167 Both SNP 0030.scaffold00117 1073981 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074071 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1074077 2 CA TG scaffold11167 Both SNP 0030.scaffold00117 1074114 1 G A scaffold11167 Both SNP 0030.scaffold00117 1074177 1 T C scaffold11167 Both SNP 0030.scaffold00117 1074202 1 G A scaffold11167 Both SNP 0030.scaffold00117 1074262 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1074340 3 AAT ... scaffold11167 ScafM SNP 0030.scaffold00117 1074364 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1074367 1 A G scaffold11167 Both SNP 0030.scaffold00117 1074410 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1074461 2 GT AC scaffold11167 ScafM INDEL 0030.scaffold00117 1074469 3 AAA ... scaffold11167 ScafM SNP 0030.scaffold00117 1074486 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074502 1 T C scaffold11167 Both SNP 0030.scaffold00117 1074526 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074560 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074632 1 T C scaffold11167 Both SNP 0030.scaffold00117 1074655 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074709 1 C T scaffold11167 Both SNP 0030.scaffold00117 1074826 1 C T scaffold11167 Both INDEL 0030.scaffold00117 1074885 1 . T scaffold11167 Both SNP 0030.scaffold00117 1074959 1 T G scaffold11167 ScafM INDEL 0030.scaffold00117 1075034 2 .. TT scaffold11167 ScafM SNP 0030.scaffold00117 1075040 1 G C scaffold11167 Both SNP 0030.scaffold00117 1075061 1 T G scaffold11167 Both SNP 0030.scaffold00117 1075101 1 A G scaffold11167 Both SNP 0030.scaffold00117 1075150 1 C A scaffold11167 Both SNP 0030.scaffold00117 1075157 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1075215 8 ........ ACTTGATG scaffold11167 ReadM SNP 0030.scaffold00117 1075429 1 C T - ScafM SNP 0030.scaffold00117 1075730 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1075749 2 AT GG scaffold11167 ScafM SNP 0030.scaffold00117 1075755 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1075773 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1075837 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1075840 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1075859 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1076627 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1076765 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1076778 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1076843 1 A C scaffold11167 ScafM INDEL 0030.scaffold00117 1076848 3 GCC ... scaffold11167 ScafM INDEL 0030.scaffold00117 1076854 7 AATTACA ....... scaffold11167 ScafM INDEL 0030.scaffold00117 1076864 3 TTC .GG scaffold11167 ScafM SNP 0030.scaffold00117 1076874 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1076881 2 CA GG scaffold11167 ScafM SNP 0030.scaffold00117 1076911 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1076990 1 G T scaffold11167 ScafM INDEL 0030.scaffold00117 1077031 4 .... AATG scaffold11167 ScafM SNP 0030.scaffold00117 1077060 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1077098 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1077128 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1077133 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1077138 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1077154 1 G T scaffold11167 ScafM INDEL 0030.scaffold00117 1077160 7 TCCTTAC ....... scaffold11167 ScafM SNP 0030.scaffold00117 1077229 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 1077282 7 TGCTATG ....... scaffold11167 Both SNP 0030.scaffold00117 1077337 1 C T scaffold11167 Both SNP 0030.scaffold00117 1077390 1 A G scaffold11167 Both SNP 0030.scaffold00117 1077431 1 C A scaffold11167 Both SNP 0030.scaffold00117 1077433 1 G T scaffold11167 ScafM INDEL 0030.scaffold00117 1077475 3 TGT ... scaffold11167 ScafM INDEL 0030.scaffold00117 1077486 3 TTT ... scaffold11167 ScafM SNP 0030.scaffold00117 1077491 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1077547 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1077550 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1077612 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1077624 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1077627 3 AAA CGT scaffold11167 ScafM SNP 0030.scaffold00117 1077721 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1077724 1 C A scaffold11167 ScafM SNP 0030.scaffold00117 1077727 1 T G scaffold11167 Both SNP 0030.scaffold00117 1077757 1 A G scaffold11167 Both SNP 0030.scaffold00117 1077811 1 C G scaffold11167 Both SNP 0030.scaffold00117 1077834 1 C T scaffold11167 Both INDEL 0030.scaffold00117 1077854 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1077869 1 G C scaffold11167 ScafM INDEL 0030.scaffold00117 1077915 5 CCCCT ..... scaffold11167 Both SNP 0030.scaffold00117 1078032 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1078041 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1078053 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1078057 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1078104 2 GT AA scaffold11167 Both SNP 0030.scaffold00117 1078142 1 G A scaffold11167 Both INDEL 0030.scaffold00117 1078197 2 .. TA scaffold11167 ScafM SNP 0030.scaffold00117 1078232 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1078240 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1078259 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1078264 1 A G scaffold11167 Both SNP 0030.scaffold00117 1078316 1 A T scaffold11167 Both SNP 0030.scaffold00117 1078332 1 A G scaffold11167 ScafM INDEL 0030.scaffold00117 1078491 2 AT .. scaffold11167 ScafM INDEL 0030.scaffold00117 1078516 6 AAGCCA ...... scaffold11167 Both SNP 0030.scaffold00117 1078633 1 G A scaffold11167 Both SNP 0030.scaffold00117 1078657 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1078663 1 A T scaffold11167 Both SNP 0030.scaffold00117 1078675 1 C G scaffold11167 ReadM SNP 0030.scaffold00117 1078713 1 G C - ReadM SNP 0030.scaffold00117 1078725 1 G A - Both SNP 0030.scaffold00117 1078896 1 G A scaffold11167 Both SNP 0030.scaffold00117 1078975 1 C T scaffold11167 Both SNP 0030.scaffold00117 1078989 1 T A scaffold11167 Both SNP 0030.scaffold00117 1079035 1 A C scaffold11167 Both SNP 0030.scaffold00117 1079039 1 A G scaffold11167 Both SNP 0030.scaffold00117 1079117 1 G A scaffold11167 Both SNP 0030.scaffold00117 1079402 1 T G scaffold11167 Both SNP 0030.scaffold00117 1079524 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1079544 1 A G scaffold11167 Both SNP 0030.scaffold00117 1079599 1 T G scaffold11167 ScafM SNP 0030.scaffold00117 1079621 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1079625 1 C A scaffold11167 ScafM INDEL 0030.scaffold00117 1079627 1 G . scaffold11167 ScafM SNP 0030.scaffold00117 1079636 1 A G scaffold11167 Both SNP 0030.scaffold00117 1079661 1 G A scaffold11167 Both SNP 0030.scaffold00117 1079683 1 A G scaffold11167 Both INDEL 0030.scaffold00117 1079824 1 A . scaffold11167 Both SNP 0030.scaffold00117 1079948 1 G A scaffold11167 Both SNP 0030.scaffold00117 1079990 1 C A scaffold11167 Both SNP 0030.scaffold00117 1080025 1 A T scaffold11167 Both SNP 0030.scaffold00117 1080032 1 C T scaffold11167 Both SNP 0030.scaffold00117 1080113 1 G A scaffold11167 Both SNP 0030.scaffold00117 1080193 1 A G scaffold11167 Both SNP 0030.scaffold00117 1080335 1 G A scaffold11167 Both SNP 0030.scaffold00117 1080374 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1080401 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1080412 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1080430 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1080432 1 T A scaffold11167 ScafM SNP 0030.scaffold00117 1080475 1 A C scaffold11167 ScafM SNP 0030.scaffold00117 1080493 1 G A scaffold11167 ScafM INDEL 0030.scaffold00117 1080503 3 GAC ... scaffold11167 ScafM SNP 0030.scaffold00117 1080557 1 C A scaffold11167 ScafM INDEL 0030.scaffold00117 1080597 2 TT .. scaffold11167 ScafM SNP 0030.scaffold00117 1080609 1 T C scaffold11167 ScafM INDEL 0030.scaffold00117 1080629 8 ........ AACTCCCA scaffold11167 ScafM SNP 0030.scaffold00117 1081095 1 G C scaffold11167 ScafM SNP 0030.scaffold00117 1081100 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1081127 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1081155 1 T C scaffold11167 ScafM SNP 0030.scaffold00117 1081237 1 C T scaffold11167 ScafM SNP 0030.scaffold00117 1081261 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1081283 1 A G scaffold11167 ScafM SNP 0030.scaffold00117 1081333 1 G A scaffold11167 ScafM SNP 0030.scaffold00117 1081420 1 A T scaffold11167 ScafM SNP 0030.scaffold00117 1081441 1 A T scaffold11167 ScafM INDEL 0030.scaffold00117 1081444 4 ACCC .... scaffold11167 ScafM INDEL 0030.scaffold00117 1081451 1 T . scaffold11167 ScafM SNP 0030.scaffold00117 1083131 2 AC GT scaffold299 ScafM SNP 0030.scaffold00117 1083137 1 G C scaffold299 ScafM SNP 0030.scaffold00117 1083139 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083152 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083158 1 G C scaffold299 ScafM SNP 0030.scaffold00117 1083176 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083180 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083204 1 G T scaffold299 ScafM SNP 0030.scaffold00117 1083210 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083226 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083231 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083259 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083274 2 CA AG scaffold299 ScafM SNP 0030.scaffold00117 1083314 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083321 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083340 1 A T scaffold299 ScafM SNP 0030.scaffold00117 1083361 1 G C scaffold299 ScafM INDEL 0030.scaffold00117 1083364 4 ATTG .... scaffold299 ScafM INDEL 0030.scaffold00117 1083370 2 TG .. scaffold299 ScafM SNP 0030.scaffold00117 1083376 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083381 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083392 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083398 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083418 1 G C scaffold299 ScafM SNP 0030.scaffold00117 1083426 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083430 1 T G scaffold299 ScafM SNP 0030.scaffold00117 1083460 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083462 1 A C scaffold299 ScafM SNP 0030.scaffold00117 1083471 2 AA TG scaffold299 ScafM SNP 0030.scaffold00117 1083474 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083476 1 T A scaffold299 ScafM SNP 0030.scaffold00117 1083479 1 T G scaffold299 ScafM SNP 0030.scaffold00117 1083482 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083520 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083527 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083570 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083577 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083579 2 AT GG scaffold299 ScafM SNP 0030.scaffold00117 1083584 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083607 1 C T scaffold299 ScafM INDEL 0030.scaffold00117 1083624 5 ..... CGGGG scaffold299 ScafM SNP 0030.scaffold00117 1083638 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083649 2 AG TT scaffold299 ScafM SNP 0030.scaffold00117 1083682 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083696 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083719 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1083729 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083735 2 GG CA scaffold299 ScafM SNP 0030.scaffold00117 1083741 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083746 2 GT AC scaffold299 ScafM SNP 0030.scaffold00117 1083770 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083777 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083781 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083785 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083789 1 T C scaffold299 ScafM SNP 0030.scaffold00117 1083791 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083800 2 AT CG scaffold299 ScafM SNP 0030.scaffold00117 1083807 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083816 1 G A scaffold299 ScafM INDEL 0030.scaffold00117 1083825 1 . T scaffold299 ScafM SNP 0030.scaffold00117 1083827 1 G A scaffold299 ScafM SNP 0030.scaffold00117 1083839 1 A G scaffold299 ScafM SNP 0030.scaffold00117 1083850 1 C T scaffold299 ScafM SNP 0030.scaffold00117 1096196 1 G A scaffold54739 ScafM SNP 0030.scaffold00117 1096349 1 A T scaffold54739 ReadM SNP 0030.scaffold00117 1096611 1 A G - ReadM SNP 0030.scaffold00117 1096652 1 A G - ReadM SNP 0030.scaffold00117 1096706 1 A G - ReadM SNP 0030.scaffold00117 1096790 1 C G - ReadM SNP 0030.scaffold00117 1096885 1 T C - ReadM SNP 0030.scaffold00117 1096925 1 T G - ReadM SNP 0030.scaffold00117 1097195 1 A G - ReadM SNP 0030.scaffold00117 1097316 1 T C - ReadM SNP 0030.scaffold00117 1097323 1 T C - ReadM SNP 0030.scaffold00117 1097475 1 A G - ReadM SNP 0030.scaffold00117 1097499 1 T C - ReadM SNP 0030.scaffold00117 1097548 1 T C - ReadM SNP 0030.scaffold00117 1097664 1 A G - ReadM SNP 0030.scaffold00117 1097812 1 T C - ReadM SNP 0030.scaffold00117 1097862 1 A G - ReadM SNP 0030.scaffold00117 1097952 1 A G - ScafM SNP 0030.scaffold00117 1098052 1 A G scaffold42882 Both SNP 0030.scaffold00117 1098121 1 A G scaffold42882 Both SNP 0030.scaffold00117 1098138 1 A G scaffold42882 ScafM SNP 0030.scaffold00117 1098199 1 G A scaffold42882 ScafM SNP 0030.scaffold00117 1098210 3 CAG TTA scaffold42882 ScafM INDEL 0030.scaffold00117 1098407 3 GAA ... scaffold42882 Both SNP 0030.scaffold00117 1098566 1 T C scaffold48804 ScafM SNP 0030.scaffold00117 1098589 1 A G scaffold48804 Both SNP 0030.scaffold00117 1098599 1 T C scaffold48804 Both SNP 0030.scaffold00117 1098638 1 A T scaffold48804 ReadM SNP 0030.scaffold00117 1098732 1 G A - ReadM SNP 0030.scaffold00117 1098757 1 C T - ReadM SNP 0030.scaffold00117 1098825 1 G A - ReadM SNP 0030.scaffold00117 1099024 1 T C - ReadM SNP 0030.scaffold00117 1099058 1 C G - ReadM SNP 0030.scaffold00117 1099520 1 T G - ReadM SNP 0030.scaffold00117 1099535 1 A G - ReadM SNP 0030.scaffold00117 1099724 1 A G - ReadM SNP 0030.scaffold00117 1099774 1 G A - ReadM SNP 0030.scaffold00117 1099809 1 G A - ReadM SNP 0030.scaffold00117 1099937 1 T C - ReadM SNP 0030.scaffold00117 1099946 1 G C - ReadM SNP 0030.scaffold00117 1100274 1 C T - ReadM SNP 0030.scaffold00117 1100337 1 A G - ReadM SNP 0030.scaffold00117 1100351 1 A G - ReadM SNP 0030.scaffold00117 1100427 1 G T - ReadM SNP 0030.scaffold00117 1100481 1 T C - ReadM SNP 0030.scaffold00117 1100887 1 T C - ScafM INDEL 0030.scaffold00117 1101027 1 . A scaffold48804 ScafM SNP 0030.scaffold00117 1101037 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101042 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101057 1 G A scaffold48804 Both SNP 0030.scaffold00117 1101106 1 G T scaffold48804 ScafM INDEL 0030.scaffold00117 1101167 15 GAATTACTTCAGAAT ............... scaffold48804 ScafM INDEL 0030.scaffold00117 1101187 1 A . scaffold48804 ScafM INDEL 0030.scaffold00117 1101190 3 AAC ... scaffold48804 ScafM SNP 0030.scaffold00117 1101208 1 T C scaffold48804 ScafM SNP 0030.scaffold00117 1101225 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101242 1 A G scaffold48804 ScafM SNP 0030.scaffold00117 1101301 1 A G scaffold48804 ScafM SNP 0030.scaffold00117 1101308 1 C G scaffold48804 ScafM SNP 0030.scaffold00117 1101320 1 A C scaffold48804 ScafM SNP 0030.scaffold00117 1101341 1 T A scaffold48804 ScafM SNP 0030.scaffold00117 1101373 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101378 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101391 1 T A scaffold48804 ScafM SNP 0030.scaffold00117 1101425 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1101484 1 A C scaffold48804 ScafM SNP 0030.scaffold00117 1101514 1 A G scaffold48804 ScafM SNP 0030.scaffold00117 1101537 1 A T scaffold48804 ScafM SNP 0030.scaffold00117 1101545 1 A G scaffold48804 ScafM SNP 0030.scaffold00117 1101621 1 G A scaffold48804 ScafM SNP 0030.scaffold00117 1105880 1 A T scaffold13313 ScafM SNP 0030.scaffold00117 1106043 1 G T scaffold13313 ScafM SNP 0030.scaffold00117 1106182 1 C T scaffold13313 ScafM SNP 0030.scaffold00117 1106303 1 A C scaffold13313 ScafM SNP 0030.scaffold00117 1106379 1 A G scaffold13313 ScafM SNP 0030.scaffold00117 1108454 1 A T scaffold3894 ScafM SNP 0030.scaffold00117 1108475 1 T G scaffold3894 ScafM SNP 0030.scaffold00117 1108577 1 G A scaffold3894 ScafM SNP 0030.scaffold00117 1108594 1 C T scaffold3894 ScafM SNP 0030.scaffold00117 1108605 1 G C scaffold3894 ScafM SNP 0030.scaffold00117 1108760 1 A G scaffold3894 ScafM INDEL 0030.scaffold00117 1108792 1 . A scaffold3894 ScafM SNP 0030.scaffold00117 1108813 1 T C scaffold3894 ScafM SNP 0030.scaffold00117 1108846 1 A G scaffold3894 ScafM INDEL 0030.scaffold00117 1119966 1 . T scaffold1695 ScafM INDEL 0030.scaffold00117 1120037 1 . A scaffold1695 ScafM SNP 0030.scaffold00117 1120081 1 C T scaffold1695 ScafM INDEL 0030.scaffold00117 1120100 21 ..................... CGCTTGAATATAATCTGCTGC scaffold1695 ScafM SNP 0030.scaffold00117 1120125 1 A G scaffold1695 ScafM SNP 0030.scaffold00117 1120164 1 A G scaffold1695 ScafM SNP 0030.scaffold00117 1120196 1 G A scaffold1695 ScafM SNP 0030.scaffold00117 1120199 1 A G scaffold1695 ScafM SNP 0030.scaffold00117 1120208 1 T C scaffold1695 ScafM SNP 0030.scaffold00117 1120239 1 A G scaffold1695 ScafM SNP 0030.scaffold00117 1147371 1 C G scaffold11167 ScafM SNP 0030.scaffold00117 1147405 2 CA AT scaffold11167 ScafM SNP 0030.scaffold00117 1147967 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1147999 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1148046 1 A G scaffold517 ScafM INDEL 0030.scaffold00117 1148064 1 A . scaffold517 ScafM SNP 0030.scaffold00117 1148121 1 C T scaffold517 ScafM INDEL 0030.scaffold00117 1148126 2 AA .. scaffold517 ScafM SNP 0030.scaffold00117 1148130 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1148182 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1148207 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1148252 1 T G scaffold517 ScafM INDEL 0030.scaffold00117 1148264 3 ... AAG scaffold517 ScafM INDEL 0030.scaffold00117 1148265 1 . A scaffold517 ScafM INDEL 0030.scaffold00117 1148275 1 . A scaffold517 ScafM SNP 0030.scaffold00117 1148292 1 A G scaffold517 ScafM INDEL 0030.scaffold00117 1148305 1 . A scaffold517 ScafM INDEL 0030.scaffold00117 1148320 13 TTATTCCTTACAA ............. scaffold517 ScafM SNP 0030.scaffold00117 1148341 1 T G scaffold517 ScafM SNP 0030.scaffold00117 1148352 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1148356 1 C A scaffold517 ScafM SNP 0030.scaffold00117 1148363 1 G A scaffold517 ScafM SNP 0030.scaffold00117 1148372 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1148376 3 AAC TTA scaffold517 ScafM INDEL 0030.scaffold00117 1148393 1 . C scaffold517 ScafM SNP 0030.scaffold00117 1148397 1 C A scaffold517 ScafM SNP 0030.scaffold00117 1148420 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1148441 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1148444 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1148457 1 T C scaffold517 Both SNP 0030.scaffold00117 1148538 1 T C scaffold517 Both SNP 0030.scaffold00117 1148566 1 T G scaffold517 ScafM INDEL 0030.scaffold00117 1148597 1 . T scaffold517 ScafM SNP 0030.scaffold00117 1148605 1 G T scaffold517 Both SNP 0030.scaffold00117 1148694 1 G C scaffold517 Both SNP 0030.scaffold00117 1148739 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1148752 1 A C scaffold517 ScafM SNP 0030.scaffold00117 1148790 1 C T scaffold517 ScafM INDEL 0030.scaffold00117 1148792 1 T . scaffold517 Both SNP 0030.scaffold00117 1148923 1 C T scaffold517 Both SNP 0030.scaffold00117 1148936 1 A G scaffold517 Both SNP 0030.scaffold00117 1149050 1 C G scaffold517 Both SNP 0030.scaffold00117 1149077 1 G A scaffold517 Both SNP 0030.scaffold00117 1149083 1 T G scaffold517 Both SNP 0030.scaffold00117 1149146 1 C A scaffold517 Both SNP 0030.scaffold00117 1149154 1 T A scaffold517 ScafM SNP 0030.scaffold00117 1149333 1 C T scaffold517 Both SNP 0030.scaffold00117 1149367 1 T C scaffold517 ScafM INDEL 0030.scaffold00117 1149544 2 .. TT scaffold517 Both SNP 0030.scaffold00117 1149592 1 A G scaffold517 Both SNP 0030.scaffold00117 1149714 1 T C scaffold517 Both SNP 0030.scaffold00117 1149727 1 T C scaffold517 Both SNP 0030.scaffold00117 1149738 1 T C scaffold517 ScafM SNP 0030.scaffold00117 1149797 1 T G scaffold517 ScafM SNP 0030.scaffold00117 1149801 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1149834 1 G C scaffold517 Both SNP 0030.scaffold00117 1149852 1 A G scaffold517 Both SNP 0030.scaffold00117 1149877 1 C T scaffold517 Both SNP 0030.scaffold00117 1149904 1 G A scaffold517 Both SNP 0030.scaffold00117 1150008 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1150025 1 A C scaffold517 ScafM SNP 0030.scaffold00117 1150037 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1150112 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1150132 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1150137 1 G C scaffold517 ScafM SNP 0030.scaffold00117 1150280 1 T C scaffold517 ScafM SNP 0030.scaffold00117 1150282 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1150299 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1150319 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1150357 1 A G scaffold517 ScafM SNP 0030.scaffold00117 1150422 1 T C scaffold517 ScafM SNP 0030.scaffold00117 1150445 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1150454 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1150493 1 C T scaffold517 ScafM SNP 0030.scaffold00117 1150519 1 T G scaffold517 ScafM SNP 0030.scaffold00117 1152572 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1152576 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1152609 1 G A scaffold517 ScafM SNP 0030.scaffold00117 1152631 1 G A scaffold517 ScafM SNP 0030.scaffold00117 1152669 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1152685 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1152720 1 T C scaffold517 ScafM SNP 0030.scaffold00117 1152738 1 C G scaffold517 ScafM SNP 0030.scaffold00117 1152752 1 A T scaffold517 ScafM SNP 0030.scaffold00117 1152770 1 G T scaffold517 ScafM SNP 0030.scaffold00117 1152837 1 A C scaffold517 ScafM SNP 0030.scaffold00117 1152839 1 G A scaffold517 ScafM INDEL 0030.scaffold00117 1152904 1 . G scaffold517 ScafM SNP 0030.scaffold00117 1152907 1 A C scaffold517 ReadM SNP 0030.scaffold00117 1154163 1 A G - ReadM SNP 0030.scaffold00117 1154187 1 A C - ReadM SNP 0030.scaffold00117 1154202 1 T A - ReadM SNP 0030.scaffold00117 1154239 1 A G - ReadM SNP 0030.scaffold00117 1154298 1 C A - ReadM SNP 0030.scaffold00117 1154325 1 A T - ReadM SNP 0030.scaffold00117 1154564 1 A G - ReadM SNP 0030.scaffold00117 1154578 1 C T - ReadM SNP 0030.scaffold00117 1154594 1 A C - ReadM SNP 0030.scaffold00117 1154717 1 T A - ReadM SNP 0030.scaffold00117 1154747 1 C T - ReadM SNP 0030.scaffold00117 1155245 1 A C - ReadM SNP 0030.scaffold00117 1155251 1 G A - ReadM SNP 0030.scaffold00117 1155542 1 A G - ReadM SNP 0030.scaffold00117 1155673 1 G A - ReadM SNP 0030.scaffold00117 1155696 1 A G - ReadM SNP 0030.scaffold00117 1155734 1 A G - ScafM SNP 0030.scaffold00117 1159318 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1159334 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1159348 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1159393 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1159400 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1159403 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1159474 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1159497 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1159516 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1159956 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1159986 1 G C scaffold15788 ScafM SNP 0030.scaffold00117 1160004 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160055 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1160064 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1160324 1 G C scaffold15788 ScafM SNP 0030.scaffold00117 1160346 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160383 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1160418 1 G C scaffold15788 ScafM INDEL 0030.scaffold00117 1160444 19 ................... TATGCACACGTCAACTAAC scaffold15788 ScafM INDEL 0030.scaffold00117 1160467 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1160526 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160542 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1160549 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1160578 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1160584 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160604 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1160651 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1160663 1 G T scaffold15788 ScafM INDEL 0030.scaffold00117 1160699 3 ... AAT scaffold15788 ScafM SNP 0030.scaffold00117 1160719 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1160731 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1160751 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160765 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1160776 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1160790 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1160809 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1160864 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1160877 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1160936 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1160947 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1160952 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1160974 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1160981 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1161171 1 C G scaffold15788 ScafM INDEL 0030.scaffold00117 1161185 1 G . scaffold15788 ScafM SNP 0030.scaffold00117 1161188 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1161190 1 A T scaffold15788 ScafM INDEL 0030.scaffold00117 1161207 3 AAA ... scaffold15788 ScafM INDEL 0030.scaffold00117 1161214 5 ATTGA ..... scaffold15788 Both SNP 0030.scaffold00117 1161267 1 G T scaffold15788 Both SNP 0030.scaffold00117 1161534 1 C T scaffold15788 Both SNP 0030.scaffold00117 1161537 1 C G scaffold15788 Both SNP 0030.scaffold00117 1161540 1 A T scaffold15788 Both SNP 0030.scaffold00117 1161726 1 C G scaffold15788 Both SNP 0030.scaffold00117 1161783 1 T C scaffold15788 Both SNP 0030.scaffold00117 1161817 1 A G scaffold15788 Both SNP 0030.scaffold00117 1162017 1 A G scaffold15788 Both INDEL 0030.scaffold00117 1162042 1 A . scaffold15788 ScafM SNP 0030.scaffold00117 1162064 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1162070 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1162074 1 C T scaffold15788 ReadM SNP 0030.scaffold00117 1162239 1 A C - ScafM INDEL 0030.scaffold00117 1162457 33 TTTTTTTTTTTGACTGGTTGAATATTGTAAATT ................................. scaffold15788 Both SNP 0030.scaffold00117 1162680 1 C T scaffold15788 Both SNP 0030.scaffold00117 1162846 1 T C scaffold15788 Both SNP 0030.scaffold00117 1162920 1 T C scaffold15788 Both SNP 0030.scaffold00117 1162924 1 C T scaffold15788 ReadM SNP 0030.scaffold00117 1163069 1 C A - ReadM SNP 0030.scaffold00117 1163125 1 G T - ReadM SNP 0030.scaffold00117 1163136 1 T C - ReadM SNP 0030.scaffold00117 1163485 1 A T - Both SNP 0030.scaffold00117 1163567 1 A C scaffold15788 ReadM SNP 0030.scaffold00117 1163626 1 C A - ReadM SNP 0030.scaffold00117 1163891 1 T C - ReadM SNP 0030.scaffold00117 1164228 1 T C - ReadM SNP 0030.scaffold00117 1166962 1 A T - ReadM SNP 0030.scaffold00117 1167034 1 A G - ReadM INDEL 0030.scaffold00117 1167121 1 . A - ReadM SNP 0030.scaffold00117 1167158 1 G T - ReadM SNP 0030.scaffold00117 1167161 1 C A - ReadM SNP 0030.scaffold00117 1167191 1 C G - ReadM SNP 0030.scaffold00117 1167419 1 A G - ReadM SNP 0030.scaffold00117 1167544 1 A G - ReadM SNP 0030.scaffold00117 1167609 1 G A - ReadM SNP 0030.scaffold00117 1167866 1 T C - ScafM SNP 0030.scaffold00117 1167960 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1168000 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1168085 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1168095 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1168117 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1168142 1 A G scaffold15788 Both SNP 0030.scaffold00117 1168320 1 C T scaffold15788 Both SNP 0030.scaffold00117 1168327 1 T A scaffold15788 Both SNP 0030.scaffold00117 1168342 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1168398 2 AA TT scaffold15788 Both SNP 0030.scaffold00117 1168448 1 C T scaffold15788 Both SNP 0030.scaffold00117 1168484 1 G C scaffold15788 Both SNP 0030.scaffold00117 1168634 1 C T scaffold15788 Both SNP 0030.scaffold00117 1168780 1 G C scaffold15788 ScafM SNP 0030.scaffold00117 1168844 1 G C scaffold15788 ScafM INDEL 0030.scaffold00117 1168990 12 ............ AGCATCCCTAAG scaffold15788 ScafM SNP 0030.scaffold00117 1168996 1 C T scaffold15788 ReadM SNP 0030.scaffold00117 1169523 1 G A - ReadM SNP 0030.scaffold00117 1169614 1 G A - ReadM SNP 0030.scaffold00117 1169656 1 T C - ReadM SNP 0030.scaffold00117 1169761 1 G A - ReadM SNP 0030.scaffold00117 1169767 1 T G - Both INDEL 0030.scaffold00117 1169927 1 . G scaffold15788 Both SNP 0030.scaffold00117 1169948 1 T C scaffold15788 Both SNP 0030.scaffold00117 1169984 1 A C scaffold15788 Both INDEL 0030.scaffold00117 1170206 3 GAT ... scaffold15788 ScafM INDEL 0030.scaffold00117 1170253 30 AATCTCCTATCACCAGTAATGCAGGAACTT .............................. scaffold15788 Both SNP 0030.scaffold00117 1170440 1 A G scaffold15788 Both SNP 0030.scaffold00117 1170582 1 T C scaffold15788 Both SNP 0030.scaffold00117 1170699 1 A C scaffold15788 ScafM INDEL 0030.scaffold00117 1170764 3 TGT ... scaffold15788 ScafM SNP 0030.scaffold00117 1170796 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1170872 50 GATTCGTTTGCGGTTCGAATAAGTTGGTGCAAAAGACCAGTAAAGCGTGA .................................................. scaffold15788 Both SNP 0030.scaffold00117 1171035 1 G A scaffold15788 Both SNP 0030.scaffold00117 1171273 1 G C scaffold15788 ReadM SNP 0030.scaffold00117 1171335 1 T A - ReadM SNP 0030.scaffold00117 1171430 1 T C - ReadM SNP 0030.scaffold00117 1171536 1 G A - ScafM INDEL 0030.scaffold00117 1171621 4 GAAC .... scaffold15788 ScafM INDEL 0030.scaffold00117 1171627 4 AATT .... scaffold15788 ScafM INDEL 0030.scaffold00117 1171633 3 GGA ... scaffold15788 ScafM INDEL 0030.scaffold00117 1171637 6 GGAAAG ...... scaffold15788 ScafM INDEL 0030.scaffold00117 1171645 6 TTATCC ...... scaffold15788 ScafM INDEL 0030.scaffold00117 1171652 1 C . scaffold15788 ScafM SNP 0030.scaffold00117 1171664 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1171702 4 .... AAAA scaffold15788 Both SNP 0030.scaffold00117 1172040 1 T C scaffold15788 Both SNP 0030.scaffold00117 1172123 1 G A scaffold15788 ScafM INDEL 0030.scaffold00117 1172149 4 TTAC .... scaffold15788 Both SNP 0030.scaffold00117 1172296 1 G A scaffold15788 Both INDEL 0030.scaffold00117 1172350 1 A . scaffold15788 Both INDEL 0030.scaffold00117 1172447 1 . G scaffold15788 Both SNP 0030.scaffold00117 1172465 1 A G scaffold15788 Both SNP 0030.scaffold00117 1172511 1 A C scaffold15788 Both SNP 0030.scaffold00117 1172522 1 A C scaffold15788 Both SNP 0030.scaffold00117 1172532 1 G C scaffold15788 Both SNP 0030.scaffold00117 1172657 1 C T scaffold15788 Both SNP 0030.scaffold00117 1172701 1 A T scaffold15788 Both INDEL 0030.scaffold00117 1172713 2 .. AA scaffold15788 Both SNP 0030.scaffold00117 1172833 1 A T scaffold15788 Both SNP 0030.scaffold00117 1173174 1 T C scaffold15788 Both SNP 0030.scaffold00117 1173335 1 C G scaffold15788 Both SNP 0030.scaffold00117 1173645 1 T A scaffold15788 Both SNP 0030.scaffold00117 1173746 1 A G scaffold15788 Both SNP 0030.scaffold00117 1173770 1 T C scaffold15788 Both SNP 0030.scaffold00117 1174020 1 C T scaffold15788 Both SNP 0030.scaffold00117 1174057 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1174306 2 .. AA scaffold15788 Both SNP 0030.scaffold00117 1174395 1 C T scaffold15788 Both SNP 0030.scaffold00117 1174620 1 T C scaffold15788 Both SNP 0030.scaffold00117 1174696 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1174772 1 A T scaffold15788 ScafM INDEL 0030.scaffold00117 1174776 3 AAG ... scaffold15788 Both SNP 0030.scaffold00117 1174942 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1175108 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1175278 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1175295 1 G C scaffold15788 ScafM INDEL 0030.scaffold00117 1175387 1 . G scaffold15788 ScafM INDEL 0030.scaffold00117 1175410 2 .. TC scaffold15788 ReadM SNP 0030.scaffold00117 1175891 1 G A - ReadM SNP 0030.scaffold00117 1175967 1 A G - ReadM SNP 0030.scaffold00117 1176003 1 G A - ReadM SNP 0030.scaffold00117 1176118 1 A G - ReadM SNP 0030.scaffold00117 1176326 1 A C - ReadM SNP 0030.scaffold00117 1176385 1 C T - ReadM SNP 0030.scaffold00117 1176410 1 G C - ReadM SNP 0030.scaffold00117 1176496 1 G C - ReadM SNP 0030.scaffold00117 1176524 1 C A - ReadM SNP 0030.scaffold00117 1176608 1 G T - ReadM SNP 0030.scaffold00117 1176732 1 A C - ReadM SNP 0030.scaffold00117 1176831 1 A G - ReadM INDEL 0030.scaffold00117 1177298 1 A . - ReadM SNP 0030.scaffold00117 1177375 1 T A - ReadM SNP 0030.scaffold00117 1177549 1 C T - ReadM SNP 0030.scaffold00117 1177654 1 C T - ReadM SNP 0030.scaffold00117 1177794 1 G C - ReadM SNP 0030.scaffold00117 1177819 1 G C - ReadM SNP 0030.scaffold00117 1177827 1 G T - ReadM SNP 0030.scaffold00117 1177877 1 G C - ReadM SNP 0030.scaffold00117 1177978 1 T C - ReadM INDEL 0030.scaffold00117 1178070 2 AT .. - ReadM INDEL 0030.scaffold00117 1178076 1 . A - ReadM INDEL 0030.scaffold00117 1178076 1 C . - ReadM SNP 0030.scaffold00117 1178143 1 C T - ReadM SNP 0030.scaffold00117 1178172 1 A T - ScafM INDEL 0030.scaffold00117 1182171 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1182174 1 A C scaffold15788 ScafM INDEL 0030.scaffold00117 1182194 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1182250 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1182277 2 TC AT scaffold15788 ScafM INDEL 0030.scaffold00117 1182295 1 A . scaffold15788 ScafM SNP 0030.scaffold00117 1183339 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1183362 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1183367 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1183393 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1183411 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1183429 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1183432 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1183476 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1183492 5 CCCCC ...AG scaffold15788 ScafM SNP 0030.scaffold00117 1183527 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1183542 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1183563 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1183587 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1183610 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1183620 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1183626 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1183677 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1183710 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1183758 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1183778 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1183826 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1183828 1 A C scaffold15788 ScafM INDEL 0030.scaffold00117 1183864 2 GT .. scaffold15788 ScafM SNP 0030.scaffold00117 1183868 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1183878 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1183885 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1183899 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1183924 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1183949 1 T C scaffold15788 ScafM INDEL 0030.scaffold00117 1184670 1 . T scaffold15788 ScafM SNP 0030.scaffold00117 1184677 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184687 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184725 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1184740 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184763 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1184770 2 GA AC scaffold15788 ScafM SNP 0030.scaffold00117 1184774 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1184831 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1184835 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1184838 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184844 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1184848 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184864 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1184866 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1184875 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1184890 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1184903 1 G T scaffold15788 ScafM INDEL 0030.scaffold00117 1184914 9 GTGTAACTA ......... scaffold15788 ScafM SNP 0030.scaffold00117 1184941 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1184963 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1184986 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1186693 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1186712 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1186752 1 G A scaffold15788 ScafM INDEL 0030.scaffold00117 1186759 11 ........... ACCCTATGCAC scaffold15788 ScafM INDEL 0030.scaffold00117 1186764 8 ........ ACAAGTGG scaffold15788 ScafM INDEL 0030.scaffold00117 1186765 7 ....... CCTATCA scaffold15788 ScafM SNP 0030.scaffold00117 1186786 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1186796 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1186803 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1187803 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1191409 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1191451 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1191454 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1191467 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1191479 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1191487 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1191497 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1191510 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1191526 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1191531 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1191550 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1191552 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1191567 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1191569 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1191595 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1191603 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1191617 2 AG TA scaffold15788 ScafM SNP 0030.scaffold00117 1191634 1 G A scaffold15788 Both INDEL 0030.scaffold00117 1191652 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1191715 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1191723 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1191752 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1193007 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1193037 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1193046 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193093 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1193123 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1193128 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1193130 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1193134 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193152 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193160 1 G A scaffold15788 ScafM INDEL 0030.scaffold00117 1193163 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1193166 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193181 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1193185 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193188 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1193190 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193194 1 C T scaffold15788 ScafM INDEL 0030.scaffold00117 1193203 18 CCACCAATACGGTGCACT .................. scaffold15788 ScafM SNP 0030.scaffold00117 1193243 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1193246 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1193263 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1194166 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1194175 1 C A scaffold15788 ScafM INDEL 0030.scaffold00117 1194196 2 TT .C scaffold15788 ScafM SNP 0030.scaffold00117 1194200 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1194204 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1194213 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1194215 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1194219 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1194227 2 TA GG scaffold15788 ScafM SNP 0030.scaffold00117 1194259 1 T C scaffold15788 ScafM INDEL 0030.scaffold00117 1194264 1 C . scaffold15788 ScafM SNP 0030.scaffold00117 1194267 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1194270 2 TG CA scaffold15788 ScafM SNP 0030.scaffold00117 1194290 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1194296 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1194303 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1194316 2 CA GG scaffold15788 ScafM SNP 0030.scaffold00117 1194368 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1194432 1 G C scaffold15788 ScafM SNP 0030.scaffold00117 1194463 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1194472 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1194689 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1194700 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1194707 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1194730 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1194754 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1194760 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1194768 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1194799 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1194801 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1194850 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1195233 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1195235 1 A T scaffold15788 ScafM INDEL 0030.scaffold00117 1195236 3 ... ACA scaffold15788 ScafM SNP 0030.scaffold00117 1195258 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1195314 1 G C scaffold15788 ScafM SNP 0030.scaffold00117 1195344 1 C T scaffold15788 ReadM SNP 0030.scaffold00117 1195771 1 C G - ReadM SNP 0030.scaffold00117 1195805 1 G A - ScafM INDEL 0030.scaffold00117 1196457 1 A . scaffold15788 ScafM SNP 0030.scaffold00117 1196462 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1196469 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1196474 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1196477 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1196481 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1196493 1 A G scaffold15788 ScafM INDEL 0030.scaffold00117 1196501 5 GAGAC ..... scaffold15788 ScafM INDEL 0030.scaffold00117 1196509 4 GGAG .... scaffold15788 ScafM SNP 0030.scaffold00117 1196554 2 TG CA scaffold15788 ScafM INDEL 0030.scaffold00117 1196563 1 T . scaffold15788 ScafM SNP 0030.scaffold00117 1196565 3 GAG TCA scaffold15788 ScafM SNP 0030.scaffold00117 1196569 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1196590 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1196601 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1196610 2 AC GA scaffold15788 ScafM SNP 0030.scaffold00117 1196633 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1196635 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1196656 2 TA AG scaffold15788 ScafM SNP 0030.scaffold00117 1196869 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1196878 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1196884 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1196887 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1196905 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1196915 2 CG TA scaffold15788 ScafM SNP 0030.scaffold00117 1196940 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1196969 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1196975 2 TC AA scaffold15788 ScafM SNP 0030.scaffold00117 1196996 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197008 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1197019 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1197047 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197061 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1197073 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197094 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1197117 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197133 1 T C scaffold15788 Both SNP 0030.scaffold00117 1197159 1 C T scaffold15788 Both SNP 0030.scaffold00117 1197187 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197227 1 G A scaffold15788 Both SNP 0030.scaffold00117 1197255 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1197278 2 TA AC scaffold15788 ScafM SNP 0030.scaffold00117 1197296 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197300 1 A C scaffold15788 ScafM SNP 0030.scaffold00117 1197363 1 T C scaffold15788 ScafM SNP 0030.scaffold00117 1197369 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197380 1 A G scaffold15788 Both SNP 0030.scaffold00117 1197432 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197510 1 T C scaffold15788 ScafM INDEL 0030.scaffold00117 1197520 5 ATTTT ..... scaffold15788 ScafM SNP 0030.scaffold00117 1197562 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1197568 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1197575 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1197589 1 G A scaffold15788 Both SNP 0030.scaffold00117 1197647 1 A G scaffold15788 Both INDEL 0030.scaffold00117 1197649 1 . A scaffold15788 Both SNP 0030.scaffold00117 1197681 1 C G scaffold15788 Both SNP 0030.scaffold00117 1197722 1 C G scaffold15788 ScafM SNP 0030.scaffold00117 1197776 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197786 1 T A scaffold15788 ScafM INDEL 0030.scaffold00117 1197788 2 AC .T scaffold15788 ScafM SNP 0030.scaffold00117 1197803 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1197805 1 T G scaffold15788 ScafM INDEL 0030.scaffold00117 1197812 1 G . scaffold15788 ScafM SNP 0030.scaffold00117 1197814 2 GT TA scaffold15788 ScafM SNP 0030.scaffold00117 1197823 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197846 2 CT TG scaffold15788 ScafM SNP 0030.scaffold00117 1197852 1 C T scaffold15788 ScafM INDEL 0030.scaffold00117 1197872 6 ...... AGAGTC scaffold15788 ScafM SNP 0030.scaffold00117 1197877 1 T G scaffold15788 ScafM SNP 0030.scaffold00117 1197887 1 A T scaffold15788 ScafM INDEL 0030.scaffold00117 1197908 1 . A scaffold15788 ScafM SNP 0030.scaffold00117 1197910 1 G A scaffold15788 ScafM SNP 0030.scaffold00117 1197929 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1197938 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1197951 1 C A scaffold15788 ScafM SNP 0030.scaffold00117 1197999 1 T A scaffold15788 ScafM SNP 0030.scaffold00117 1198003 1 A G scaffold15788 ScafM SNP 0030.scaffold00117 1198128 1 A T scaffold15788 ScafM SNP 0030.scaffold00117 1198143 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1198156 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1198159 1 G T scaffold15788 ScafM SNP 0030.scaffold00117 1198196 1 C T scaffold15788 ScafM SNP 0030.scaffold00117 1198198 1 A T scaffold15788 ScafM INDEL 0030.scaffold00117 1198212 1 . G scaffold15788 ScafM INDEL 0030.scaffold00117 1198213 2 .. CT scaffold15788 ScafM SNP 0030.scaffold00117 1201195 2 GT AC scaffold4480 ScafM SNP 0030.scaffold00117 1201205 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1201226 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201237 2 CT TC scaffold4480 ScafM SNP 0030.scaffold00117 1201272 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201300 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201316 1 G A scaffold4480 ScafM INDEL 0030.scaffold00117 1201326 2 CT .. scaffold4480 ScafM INDEL 0030.scaffold00117 1201329 1 A . scaffold4480 ScafM SNP 0030.scaffold00117 1201335 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1201343 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201358 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1201381 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201400 1 T G scaffold4480 ScafM SNP 0030.scaffold00117 1201419 2 TT AA scaffold4480 ScafM SNP 0030.scaffold00117 1201430 1 G T scaffold4480 ScafM SNP 0030.scaffold00117 1201433 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1201472 1 T G scaffold4480 ScafM SNP 0030.scaffold00117 1201477 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201481 1 A C scaffold4480 ScafM SNP 0030.scaffold00117 1201526 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201530 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1201533 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201538 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1201540 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201552 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201557 1 G C scaffold4480 ScafM SNP 0030.scaffold00117 1201560 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1201577 2 TC CA scaffold4480 ScafM SNP 0030.scaffold00117 1201610 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201620 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1201622 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1201640 1 G T scaffold4480 ScafM SNP 0030.scaffold00117 1201642 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1202125 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1202142 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1202154 1 A G scaffold4480 ScafM INDEL 0030.scaffold00117 1202160 1 G . scaffold4480 ScafM SNP 0030.scaffold00117 1202172 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1202203 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1202219 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1202271 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1202298 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1202302 1 G C scaffold4480 ScafM SNP 0030.scaffold00117 1202305 2 TG CA scaffold4480 ScafM SNP 0030.scaffold00117 1202321 1 A T scaffold4480 ScafM INDEL 0030.scaffold00117 1202331 1 . G scaffold4480 ScafM SNP 0030.scaffold00117 1202336 1 T C scaffold4480 ScafM INDEL 0030.scaffold00117 1202341 1 . T scaffold4480 ScafM SNP 0030.scaffold00117 1202347 2 TA CG scaffold4480 ScafM SNP 0030.scaffold00117 1202360 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1202365 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1202381 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1202383 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1202413 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1202424 1 T G scaffold4480 ScafM INDEL 0030.scaffold00117 1202457 30 AGATAGAATGGCTCTTTGAGGAGGGTTGTG .............................. scaffold4480 ScafM SNP 0030.scaffold00117 1202500 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1202502 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1202506 1 A G scaffold4480 ScafM INDEL 0030.scaffold00117 1202536 2 GT .. scaffold4480 ScafM INDEL 0030.scaffold00117 1202539 3 TTC ... scaffold4480 ScafM INDEL 0030.scaffold00117 1202543 2 GT .. scaffold4480 ScafM SNP 0030.scaffold00117 1202549 1 C G scaffold4480 ScafM SNP 0030.scaffold00117 1202571 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1202600 1 A C scaffold4480 ScafM SNP 0030.scaffold00117 1202606 1 T G scaffold4480 ScafM SNP 0030.scaffold00117 1205762 1 G T scaffold4480 ScafM SNP 0030.scaffold00117 1205768 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1205785 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1205803 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1205813 1 G T scaffold4480 ScafM SNP 0030.scaffold00117 1205885 1 G C scaffold4480 ScafM SNP 0030.scaffold00117 1205905 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1205924 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1205980 1 A C scaffold4480 ScafM INDEL 0030.scaffold00117 1205991 1 T . scaffold4480 ScafM SNP 0030.scaffold00117 1206007 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1206025 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1207178 1 G T scaffold4618 ScafM SNP 0030.scaffold00117 1207211 1 T G scaffold4618 ScafM SNP 0030.scaffold00117 1207250 1 A T scaffold4618 ScafM SNP 0030.scaffold00117 1207280 1 G A scaffold4618 ScafM SNP 0030.scaffold00117 1207288 1 A G scaffold4618 ScafM SNP 0030.scaffold00117 1207292 1 T C scaffold4618 ScafM SNP 0030.scaffold00117 1208227 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1208232 1 T G scaffold4480 ScafM SNP 0030.scaffold00117 1208256 1 G C scaffold4480 ScafM INDEL 0030.scaffold00117 1208260 1 . A scaffold4480 Both SNP 0030.scaffold00117 1208281 1 A T scaffold4480 Both SNP 0030.scaffold00117 1208294 1 A G scaffold4480 Both SNP 0030.scaffold00117 1208486 1 G T scaffold4480 Both SNP 0030.scaffold00117 1208489 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1208592 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1208596 1 G A scaffold4480 ScafM INDEL 0030.scaffold00117 1208598 1 . T scaffold4480 ScafM SNP 0030.scaffold00117 1208603 1 A C scaffold4480 Both SNP 0030.scaffold00117 1208667 1 G C scaffold4480 Both SNP 0030.scaffold00117 1208685 1 T A scaffold4480 Both SNP 0030.scaffold00117 1208729 1 T C scaffold4480 Both SNP 0030.scaffold00117 1208772 1 T G scaffold4480 Both SNP 0030.scaffold00117 1208823 1 C G scaffold4480 Both SNP 0030.scaffold00117 1209043 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209093 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1209352 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1209371 1 T C scaffold4480 ScafM INDEL 0030.scaffold00117 1209379 17 ................. CCCACAAATAATTAGAA scaffold4480 ScafM SNP 0030.scaffold00117 1209419 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1209452 1 G A scaffold4480 ScafM INDEL 0030.scaffold00117 1209504 4 .... TCCA scaffold4480 ScafM INDEL 0030.scaffold00117 1209505 1 . A scaffold4480 ScafM INDEL 0030.scaffold00117 1209509 1 . A scaffold4480 ScafM INDEL 0030.scaffold00117 1209513 1 . A scaffold4480 ScafM INDEL 0030.scaffold00117 1209516 1 . A scaffold4480 ScafM SNP 0030.scaffold00117 1209521 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209525 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209555 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1209565 1 C A scaffold4480 ScafM SNP 0030.scaffold00117 1209582 1 A G scaffold4480 ScafM INDEL 0030.scaffold00117 1209622 4 TATA .... scaffold4480 ScafM SNP 0030.scaffold00117 1209660 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1209670 1 T G scaffold4480 ScafM INDEL 0030.scaffold00117 1209681 1 C . scaffold4480 ScafM SNP 0030.scaffold00117 1209684 2 CA AG scaffold4480 ScafM SNP 0030.scaffold00117 1209692 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209700 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1209704 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209745 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1209794 1 A G scaffold4480 ScafM INDEL 0030.scaffold00117 1209863 1 . C scaffold4480 Both SNP 0030.scaffold00117 1210094 1 A T scaffold4480 Both SNP 0030.scaffold00117 1210136 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210187 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210271 1 G A scaffold4480 Both SNP 0030.scaffold00117 1210354 1 A C scaffold4480 Both SNP 0030.scaffold00117 1210413 1 C A scaffold4480 Both SNP 0030.scaffold00117 1210416 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210451 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210489 1 A G scaffold4480 Both SNP 0030.scaffold00117 1210522 1 G T scaffold4480 Both SNP 0030.scaffold00117 1210539 1 C A scaffold4480 Both SNP 0030.scaffold00117 1210626 1 A G scaffold4480 Both SNP 0030.scaffold00117 1210667 1 C T scaffold4480 Both INDEL 0030.scaffold00117 1210703 1 . T scaffold4480 Both SNP 0030.scaffold00117 1210764 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210789 1 C T scaffold4480 Both SNP 0030.scaffold00117 1210832 1 C A scaffold4480 Both SNP 0030.scaffold00117 1210924 1 T C scaffold4480 Both SNP 0030.scaffold00117 1210958 1 T G scaffold4480 Both SNP 0030.scaffold00117 1210969 1 A G scaffold4480 Both SNP 0030.scaffold00117 1211053 1 C T scaffold4480 Both SNP 0030.scaffold00117 1211150 1 A C scaffold4480 Both SNP 0030.scaffold00117 1211173 1 C T scaffold4480 Both SNP 0030.scaffold00117 1211194 1 C T scaffold4480 Both SNP 0030.scaffold00117 1211227 1 G A scaffold4480 Both SNP 0030.scaffold00117 1211276 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1211319 1 A T scaffold4480 ScafM SNP 0030.scaffold00117 1211322 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1211328 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1211365 2 TA CT scaffold4480 Both SNP 0030.scaffold00117 1211371 1 G A scaffold4480 Both SNP 0030.scaffold00117 1211442 1 A C scaffold4480 Both SNP 0030.scaffold00117 1211459 1 C T scaffold4480 Both SNP 0030.scaffold00117 1211486 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1211512 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1211518 1 A C scaffold4480 ScafM SNP 0030.scaffold00117 1211522 1 A C scaffold4480 ScafM INDEL 0030.scaffold00117 1211527 1 . T scaffold4480 ScafM SNP 0030.scaffold00117 1211595 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1211602 2 GA AT scaffold4480 ScafM SNP 0030.scaffold00117 1211623 2 GC CT scaffold4480 ScafM INDEL 0030.scaffold00117 1211634 1 . T scaffold4480 ScafM SNP 0030.scaffold00117 1211646 1 C A scaffold4480 ScafM INDEL 0030.scaffold00117 1211671 1 . T scaffold4480 ScafM SNP 0030.scaffold00117 1211684 1 G T scaffold4480 ScafM SNP 0030.scaffold00117 1211708 2 GC AA scaffold4480 Both SNP 0030.scaffold00117 1211809 1 A G scaffold4480 Both SNP 0030.scaffold00117 1211857 1 G A scaffold4480 Both SNP 0030.scaffold00117 1211935 1 T C scaffold4480 Both SNP 0030.scaffold00117 1212020 1 T C scaffold4480 Both SNP 0030.scaffold00117 1212054 1 G C scaffold4480 ScafM INDEL 0030.scaffold00117 1212138 2 TA .. scaffold4480 Both SNP 0030.scaffold00117 1212186 1 A C scaffold4480 Both INDEL 0030.scaffold00117 1212300 1 . A scaffold4480 ScafM SNP 0030.scaffold00117 1212304 1 T A scaffold4480 Both SNP 0030.scaffold00117 1212504 1 T C scaffold4480 Both SNP 0030.scaffold00117 1212511 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1212568 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1212572 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1212602 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1212619 1 G A scaffold4480 ScafM SNP 0030.scaffold00117 1212621 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1212628 2 CC GA scaffold4480 ScafM INDEL 0030.scaffold00117 1212638 2 .. TT scaffold4480 ScafM SNP 0030.scaffold00117 1212647 1 A C scaffold4480 ScafM INDEL 0030.scaffold00117 1212650 1 . C scaffold4480 ScafM INDEL 0030.scaffold00117 1212653 1 . A scaffold4480 ScafM SNP 0030.scaffold00117 1212658 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1213031 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1213045 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1213058 1 C T scaffold4480 ScafM SNP 0030.scaffold00117 1213069 1 T C scaffold4480 ScafM SNP 0030.scaffold00117 1213132 1 T A scaffold4480 ScafM SNP 0030.scaffold00117 1213145 1 A G scaffold4480 ScafM SNP 0030.scaffold00117 1213185 2 TT CG scaffold4480 ScafM SNP 0030.scaffold00117 1213636 1 C T scaffold6298 ScafM SNP 0030.scaffold00117 1213717 1 C T scaffold6298 ScafM SNP 0030.scaffold00117 1213739 1 T C scaffold6298 ScafM INDEL 0030.scaffold00117 1213812 30 ATCATCTTCGACCAACGATTTCGACCAACC .............................. scaffold6298 ScafM SNP 0030.scaffold00117 1213882 1 A G scaffold6298 ScafM SNP 0030.scaffold00117 1213903 1 C T scaffold6298 ScafM SNP 0030.scaffold00117 1213936 1 C T scaffold6298 ScafM SNP 0030.scaffold00117 1214194 1 T C scaffold6298 ScafM SNP 0030.scaffold00117 1214219 1 C T scaffold6298 ScafM SNP 0030.scaffold00117 1214246 1 T C scaffold6298 ScafM SNP 0030.scaffold00117 1214255 1 T G scaffold6298 ReadM SNP 0030.scaffold00117 1215890 1 A C - ReadM SNP 0030.scaffold00117 1215895 1 A C - ReadM SNP 0030.scaffold00117 1216059 1 G A - ReadM SNP 0030.scaffold00117 1216085 1 C T - ReadM SNP 0030.scaffold00117 1216091 1 G A - ReadM SNP 0030.scaffold00117 1216215 1 G A - ReadM SNP 0030.scaffold00117 1216231 1 A G - ReadM SNP 0030.scaffold00117 1216471 1 T C - ReadM INDEL 0030.scaffold00117 1216497 1 . A - ReadM SNP 0030.scaffold00117 1216583 1 A T - ReadM SNP 0030.scaffold00117 1216631 1 T G - ReadM SNP 0030.scaffold00117 1216687 1 G T - ReadM INDEL 0030.scaffold00117 1216708 1 . A - ReadM SNP 0030.scaffold00117 1216725 1 T C - ReadM INDEL 0030.scaffold00117 1216800 1 A . - ReadM SNP 0030.scaffold00117 1216821 1 G A - ReadM SNP 0030.scaffold00117 1216912 1 A G - ReadM SNP 0030.scaffold00117 1216935 1 G T - ReadM SNP 0030.scaffold00117 1216951 1 C T - ReadM SNP 0030.scaffold00117 1216963 1 C T - ReadM SNP 0030.scaffold00117 1217037 1 A T - ReadM SNP 0030.scaffold00117 1217069 1 G A - ReadM SNP 0030.scaffold00117 1217081 1 A G - ReadM SNP 0030.scaffold00117 1217204 1 G A - ReadM SNP 0030.scaffold00117 1217271 1 A C - ReadM SNP 0030.scaffold00117 1217294 1 T G - ReadM SNP 0030.scaffold00117 1217328 1 C T - ReadM SNP 0030.scaffold00117 1217462 1 A C - ReadM SNP 0030.scaffold00117 1217516 1 C T - ReadM SNP 0030.scaffold00117 1217553 1 T C - ReadM SNP 0030.scaffold00117 1217566 1 A G - ReadM SNP 0030.scaffold00117 1217765 1 A G - ReadM SNP 0030.scaffold00117 1217791 1 T C - ReadM SNP 0030.scaffold00117 1217878 1 G A - ReadM SNP 0030.scaffold00117 1217894 1 C T - ReadM SNP 0030.scaffold00117 1218005 1 A G - ReadM SNP 0030.scaffold00117 1218063 1 C A - ReadM SNP 0030.scaffold00117 1218082 1 A G - ReadM SNP 0030.scaffold00117 1218167 1 G A - ReadM SNP 0030.scaffold00117 1218249 1 A T - ReadM SNP 0030.scaffold00117 1218317 1 G T - ReadM SNP 0030.scaffold00117 1218422 1 T G - ReadM SNP 0030.scaffold00117 1218556 1 C A - ReadM SNP 0030.scaffold00117 1218558 1 G A - ReadM SNP 0030.scaffold00117 1218647 1 C T - ReadM SNP 0030.scaffold00117 1218789 1 C T - ReadM SNP 0030.scaffold00117 1218864 1 C T - ReadM SNP 0030.scaffold00117 1218891 1 T C - ReadM SNP 0030.scaffold00117 1218922 1 G A - ReadM SNP 0030.scaffold00117 1218938 1 A C - ReadM SNP 0030.scaffold00117 1218996 1 T A - ReadM SNP 0030.scaffold00117 1219048 1 A G - ReadM INDEL 0030.scaffold00117 1219161 1 . T - ReadM SNP 0030.scaffold00117 1219194 1 C T - ReadM SNP 0030.scaffold00117 1219214 1 C T - ReadM SNP 0030.scaffold00117 1219308 1 T C - ReadM SNP 0030.scaffold00117 1219413 1 G T - ReadM SNP 0030.scaffold00117 1219488 1 T C - ReadM SNP 0030.scaffold00117 1219490 1 G A - ReadM INDEL 0030.scaffold00117 1219645 2 .. CG - ReadM SNP 0030.scaffold00117 1219804 1 T C - ReadM SNP 0030.scaffold00117 1219821 1 C T - ReadM SNP 0030.scaffold00117 1219829 1 C T - ReadM SNP 0030.scaffold00117 1220009 1 G A - ReadM SNP 0030.scaffold00117 1220061 1 C T - ReadM SNP 0030.scaffold00117 1220153 1 C T - ReadM SNP 0030.scaffold00117 1220172 1 A G - ReadM SNP 0030.scaffold00117 1220232 1 G A - ReadM SNP 0031.scaffold00123 664 1 G T - ReadM SNP 0031.scaffold00123 760 1 G A - ReadM INDEL 0031.scaffold00123 1868 1 A . - ReadM SNP 0031.scaffold00123 15753 1 C T - ReadM SNP 0031.scaffold00123 30786 2 CC AA - ReadM SNP 0031.scaffold00123 35723 1 A G - ScafM SNP 0031.scaffold00123 48633 1 A G scaffold7037 ScafM SNP 0031.scaffold00123 48665 1 G A scaffold7037 ScafM SNP 0031.scaffold00123 48808 1 A T scaffold10093 ScafM INDEL 0031.scaffold00123 48813 1 . C scaffold10093 ScafM SNP 0031.scaffold00123 48827 1 C T scaffold10093 ScafM SNP 0031.scaffold00123 48833 1 A G scaffold10093 ScafM SNP 0031.scaffold00123 48838 1 T C scaffold10093 ScafM SNP 0031.scaffold00123 48880 1 G A scaffold10093 ScafM SNP 0031.scaffold00123 48885 1 A G scaffold10093 ScafM SNP 0031.scaffold00123 48892 1 G A scaffold10093 ScafM SNP 0031.scaffold00123 48898 2 GA AT scaffold10093 ScafM SNP 0031.scaffold00123 48909 1 C A scaffold10093 ScafM SNP 0031.scaffold00123 48914 1 T G scaffold10093 ScafM SNP 0031.scaffold00123 48920 1 G A scaffold10093 ScafM SNP 0031.scaffold00123 48922 2 GT AA scaffold10093 ScafM INDEL 0031.scaffold00123 48934 2 .. CG scaffold10093 ScafM INDEL 0031.scaffold00123 48936 2 .C AA scaffold10093 ScafM INDEL 0031.scaffold00123 48938 1 . T scaffold10093 ScafM SNP 0031.scaffold00123 48940 1 C G scaffold10093 ScafM INDEL 0031.scaffold00123 48943 1 . G scaffold10093 ScafM INDEL 0031.scaffold00123 48963 1 . A scaffold10093 ScafM INDEL 0031.scaffold00123 48965 4 .... TTTC scaffold10093 ScafM INDEL 0031.scaffold00123 48967 1 . G scaffold10093 ScafM INDEL 0031.scaffold00123 48974 1 . A scaffold10093 ScafM INDEL 0031.scaffold00123 48976 2 .G AT scaffold10093 ScafM SNP 0031.scaffold00123 48980 1 A T scaffold10093 ScafM INDEL 0031.scaffold00123 48981 1 . C scaffold10093 ScafM INDEL 0031.scaffold00123 48982 4 .... CGCG scaffold10093 ScafM SNP 0031.scaffold00123 48986 1 C T scaffold10093 ScafM INDEL 0031.scaffold00123 48990 2 .. TT scaffold10093 ScafM SNP 0031.scaffold00123 48992 1 G A scaffold10093 ScafM SNP 0031.scaffold00123 48994 1 A T scaffold10093 ScafM INDEL 0031.scaffold00123 48996 2 .T GC scaffold10093 ScafM SNP 0031.scaffold00123 49002 1 T C scaffold10093 ScafM SNP 0031.scaffold00123 49006 1 C A scaffold10093 ScafM SNP 0031.scaffold00123 49015 1 A G scaffold10093 ScafM SNP 0031.scaffold00123 49038 1 T C scaffold10093 ScafM SNP 0031.scaffold00123 49057 1 C G scaffold10093 ScafM INDEL 0031.scaffold00123 49061 2 CT .A scaffold10093 ScafM INDEL 0031.scaffold00123 49066 1 . G scaffold10093 ScafM SNP 0031.scaffold00123 49075 1 A G scaffold10093 ScafM SNP 0031.scaffold00123 49078 1 G T scaffold10093 ScafM INDEL 0031.scaffold00123 49083 3 ..A GCG scaffold10093 ScafM SNP 0031.scaffold00123 49100 2 TC AT scaffold10093 ScafM SNP 0031.scaffold00123 68960 1 C T scaffold69956 ScafM SNP 0031.scaffold00123 68979 1 G T scaffold69956 ScafM SNP 0031.scaffold00123 68981 1 G T scaffold69956 ScafM SNP 0031.scaffold00123 69000 1 A G scaffold69956 ScafM SNP 0031.scaffold00123 69044 1 A G scaffold69956 ScafM SNP 0031.scaffold00123 69065 1 C T scaffold69956 ScafM SNP 0031.scaffold00123 69116 1 G A scaffold69956 ScafM SNP 0031.scaffold00123 69130 1 A G scaffold69956 ScafM SNP 0031.scaffold00123 69132 1 G A scaffold69956 ScafM SNP 0031.scaffold00123 69140 1 T A scaffold69956 ScafM INDEL 0031.scaffold00123 78102 1 A . scaffold8922 Both INDEL 0031.scaffold00123 83871 1 . A scaffold8922 ReadM SNP 0031.scaffold00123 85071 1 G A - ScafM SNP 0031.scaffold00123 85841 1 A G scaffold8922 Both SNP 0031.scaffold00123 107242 1 A G scaffold8922 ScafM INDEL 0031.scaffold00123 111878 4 .... ATTG scaffold8922 ScafM SNP 0031.scaffold00123 111887 1 A G scaffold8922 ScafM INDEL 0031.scaffold00123 111928 1 . T scaffold8922 ScafM SNP 0031.scaffold00123 129743 1 A C scaffold8922 ScafM INDEL 0031.scaffold00123 129806 1 C . scaffold8922 ScafM INDEL 0031.scaffold00123 133903 10 .......... TTTTTTTTTT scaffold8922 ScafM SNP 0031.scaffold00123 134310 1 T C scaffold8922 ScafM INDEL 0031.scaffold00123 150711 1 . A scaffold8922 ScafM SNP 0031.scaffold00123 152563 1 A T scaffold7229 ScafM INDEL 0031.scaffold00123 152575 1 . T scaffold7229 Both SNP 0031.scaffold00123 158880 1 A C scaffold30504 Both SNP 0031.scaffold00123 159321 1 T G scaffold30504 ScafM SNP 0031.scaffold00123 160085 1 A G scaffold30504 Both SNP 0031.scaffold00123 160090 1 T G scaffold30504 ScafM INDEL 0031.scaffold00123 160110 1 G . scaffold30504 ScafM SNP 0031.scaffold00123 160187 1 C T scaffold30504 ScafM SNP 0031.scaffold00123 160411 2 AA TT scaffold30504 ScafM SNP 0031.scaffold00123 161246 1 A C scaffold52418 Both INDEL 0031.scaffold00123 161298 1 . T scaffold52418 ScafM INDEL 0031.scaffold00123 161367 13 TTTTTGTGATATA ............. scaffold52418 ScafM SNP 0031.scaffold00123 161643 1 A C scaffold52418 ScafM SNP 0031.scaffold00123 162541 1 G A scaffold52418 ScafM SNP 0031.scaffold00123 164897 1 A T scaffold17087 ScafM SNP 0031.scaffold00123 164922 1 T C scaffold17087 ScafM SNP 0031.scaffold00123 165032 1 A G scaffold17087 ScafM SNP 0031.scaffold00123 165049 1 C G scaffold17087 ScafM INDEL 0031.scaffold00123 165102 1 T . scaffold17087 ScafM SNP 0031.scaffold00123 165112 1 G T scaffold17087 ScafM SNP 0031.scaffold00123 165128 1 T C scaffold17087 ScafM SNP 0031.scaffold00123 165138 1 C A scaffold17087 ScafM SNP 0031.scaffold00123 165158 1 C G scaffold17087 ScafM SNP 0031.scaffold00123 165171 1 T C scaffold17087 ScafM SNP 0031.scaffold00123 165176 1 G C scaffold17087 ScafM SNP 0031.scaffold00123 165224 1 C A scaffold17087 Both SNP 0031.scaffold00123 165440 1 C T scaffold17087 Both SNP 0031.scaffold00123 165462 1 G A scaffold17087 ScafM SNP 0031.scaffold00123 165505 1 G A scaffold17087 ScafM SNP 0031.scaffold00123 165524 1 C T scaffold17087 ScafM SNP 0031.scaffold00123 165533 1 G A scaffold17087 ScafM INDEL 0031.scaffold00123 165553 1 . T scaffold17087 Both SNP 0031.scaffold00123 165569 1 A T scaffold17087 Both SNP 0031.scaffold00123 165577 1 G A scaffold17087 Both INDEL 0031.scaffold00123 165607 1 A . scaffold17087 Both SNP 0031.scaffold00123 165686 1 G A scaffold17087 ScafM INDEL 0031.scaffold00123 165737 1 . T scaffold17087 ScafM SNP 0031.scaffold00123 165833 1 C A scaffold17087 ScafM INDEL 0031.scaffold00123 180674 18 TTATCTTGATGGTCAATT .................. scaffold15718 ScafM SNP 0031.scaffold00123 190076 1 G A scaffold1301 ScafM SNP 0031.scaffold00123 190103 1 C T scaffold1301 ScafM SNP 0031.scaffold00123 190149 1 G A scaffold1301 Both SNP 0031.scaffold00123 198894 1 C T scaffold1301 ReadM INDEL 0031.scaffold00123 206911 1 T . - Both SNP 0031.scaffold00123 216135 1 C T scaffold1301 ReadM SNP 0031.scaffold00123 221167 1 A G - ReadM INDEL 0031.scaffold00123 239677 1 C . - ReadM INDEL 0031.scaffold00123 248236 1 T . - ScafM INDEL 0031.scaffold00123 249042 1 . T scaffold7004 Both SNP 0031.scaffold00123 258213 1 G T scaffold7004 ReadM INDEL 0031.scaffold00123 266664 1 . A - Both INDEL 0031.scaffold00123 274190 1 A . scaffold7004 ScafM SNP 0031.scaffold00123 278592 1 T C scaffold7004 ScafM SNP 0031.scaffold00123 286953 1 G A scaffold7004 ScafM SNP 0031.scaffold00123 286955 1 G A scaffold7004 ScafM INDEL 0031.scaffold00123 293480 21 ..................... CTAAATGAAAGTAAGTTACCT scaffold7004 ScafM INDEL 0031.scaffold00123 302968 1 . T scaffold7004 ScafM INDEL 0031.scaffold00123 303887 3 ... AAA scaffold7004 ScafM SNP 0031.scaffold00123 303889 1 C A scaffold7004 ScafM INDEL 0031.scaffold00123 303907 1 A . scaffold7004 ScafM INDEL 0031.scaffold00123 303922 1 A . scaffold7004 ReadM SNP 0031.scaffold00123 309154 1 G A - ReadM INDEL 0031.scaffold00123 309392 1 G . - ReadM SNP 0031.scaffold00123 317241 1 A G - ScafM SNP 0031.scaffold00123 346664 1 C T scaffold2234 ScafM SNP 0031.scaffold00123 347616 1 A T scaffold2234 ReadM SNP 0031.scaffold00123 360157 1 C T - ScafM INDEL 0031.scaffold00123 367770 1 . T scaffold2234 ScafM INDEL 0031.scaffold00123 389885 1 . T scaffold2234 ReadM SNP 0031.scaffold00123 425593 1 A G - ScafM SNP 0031.scaffold00123 441997 1 T C scaffold11307 ScafM SNP 0031.scaffold00123 449506 1 T C scaffold8967 ScafM SNP 0031.scaffold00123 449517 1 G A scaffold8967 ScafM SNP 0031.scaffold00123 449535 1 T G scaffold8967 ScafM SNP 0031.scaffold00123 449552 1 G A scaffold8967 ScafM INDEL 0031.scaffold00123 504426 14 AAGGCAAAGTTTAA .............. scaffold6310 ReadM SNP 0031.scaffold00123 507479 1 C T - ScafM SNP 0031.scaffold00123 516485 1 T C scaffold6310 ScafM SNP 0031.scaffold00123 551742 1 T A scaffold6310 ScafM SNP 0031.scaffold00123 551749 1 A G scaffold6310 ScafM SNP 0031.scaffold00123 551812 1 G A scaffold6310 ScafM SNP 0031.scaffold00123 555710 1 T C scaffold6310 Both SNP 0031.scaffold00123 562201 1 A G scaffold6310 Both SNP 0031.scaffold00123 562812 1 T C scaffold6310 ScafM INDEL 0031.scaffold00123 565788 19 CGCGCTTTTATAATTGAAG ................... scaffold6310 Both SNP 0031.scaffold00123 574981 1 A G scaffold6310 ScafM SNP 0031.scaffold00123 577813 1 G T scaffold16101 ScafM INDEL 0031.scaffold00123 580523 3 ... AAA scaffold6310 ScafM SNP 0031.scaffold00123 583007 1 T C scaffold40966 ScafM SNP 0031.scaffold00123 583052 1 G A scaffold40966 ScafM SNP 0031.scaffold00123 583054 1 A C scaffold40966 ScafM SNP 0031.scaffold00123 583062 1 T C scaffold40966 ScafM SNP 0031.scaffold00123 583068 1 G A scaffold40966 ScafM SNP 0031.scaffold00123 583075 1 C T scaffold40966 ScafM SNP 0031.scaffold00123 583080 1 C T scaffold40966 ScafM INDEL 0031.scaffold00123 603361 1 . T scaffold6310 ScafM SNP 0031.scaffold00123 604838 1 G A scaffold9996 ScafM SNP 0031.scaffold00123 604842 1 A G scaffold9996 ScafM SNP 0031.scaffold00123 615506 1 G T scaffold6310 ReadM SNP 0031.scaffold00123 641970 1 T C - ReadM SNP 0031.scaffold00123 643914 1 C T - ScafM INDEL 0031.scaffold00123 649236 1 . T scaffold6310 ScafM SNP 0031.scaffold00123 649762 1 A T scaffold6310 ScafM INDEL 0031.scaffold00123 649964 5 TTATG ..... scaffold6310 Both SNP 0031.scaffold00123 653695 1 T A scaffold6310 ScafM SNP 0031.scaffold00123 654113 2 CA AC scaffold6310 ReadM SNP 0031.scaffold00123 658324 1 T A - Both INDEL 0031.scaffold00123 676936 1 . A scaffold6310 ScafM INDEL 0031.scaffold00123 703333 5 TAATT ..... scaffold6310 ScafM INDEL 0031.scaffold00123 707986 1 A . scaffold6310 ScafM SNP 0031.scaffold00123 708005 1 T C scaffold6310 ScafM INDEL 0031.scaffold00123 708014 12 ............ CTGACTTCGATT scaffold6310 Both SNP 0031.scaffold00123 711807 2 AA GT scaffold6310 ReadM SNP 0031.scaffold00123 712158 1 G T - ReadM SNP 0031.scaffold00123 724599 1 G T - ScafM INDEL 0031.scaffold00123 730947 1 G . scaffold6310 ScafM SNP 0031.scaffold00123 730980 1 T C scaffold6310 ScafM SNP 0031.scaffold00123 730982 1 G T scaffold6310 ScafM SNP 0031.scaffold00123 731064 1 C T scaffold6310 ScafM SNP 0031.scaffold00123 731067 2 AA TT scaffold6310 ScafM SNP 0031.scaffold00123 731070 1 C T scaffold6310 ScafM INDEL 0031.scaffold00123 731094 2 TG .. scaffold6310 ScafM INDEL 0031.scaffold00123 731098 1 . T scaffold6310 ScafM INDEL 0031.scaffold00123 731102 1 G . scaffold6310 ScafM INDEL 0031.scaffold00123 731104 4 GCTT .... scaffold6310 ScafM INDEL 0031.scaffold00123 731110 3 TGA ... scaffold6310 ScafM SNP 0031.scaffold00123 731114 1 A T scaffold6310 ScafM SNP 0031.scaffold00123 731120 2 AT GC scaffold6310 ScafM INDEL 0031.scaffold00123 731125 1 T . scaffold6310 ScafM INDEL 0031.scaffold00123 731127 2 GT .. scaffold6310 ScafM INDEL 0031.scaffold00123 731130 1 G . scaffold6310 ScafM INDEL 0031.scaffold00123 731132 2 TG .. scaffold6310 ReadM SNP 0031.scaffold00123 739907 1 C G - ReadM SNP 0031.scaffold00123 760142 1 C T - ReadM SNP 0031.scaffold00123 765040 1 G A - Both SNP 0031.scaffold00123 766809 1 A C scaffold6310 ReadM SNP 0031.scaffold00123 771293 1 T C - ReadM SNP 0031.scaffold00123 782207 1 T C - ScafM SNP 0031.scaffold00123 785285 1 A G scaffold427 ScafM SNP 0031.scaffold00123 785388 1 G A scaffold427 ScafM SNP 0031.scaffold00123 785540 1 A G scaffold427 ScafM INDEL 0031.scaffold00123 796743 1 . A scaffold427 ReadM SNP 0031.scaffold00123 799823 1 C T - ScafM INDEL 0031.scaffold00123 802113 2 .C AA scaffold427 ScafM INDEL 0031.scaffold00123 802125 1 . A scaffold427 ReadM INDEL 0031.scaffold00123 824978 1 A . - ReadM SNP 0031.scaffold00123 838631 1 C T - ScafM SNP 0031.scaffold00123 844936 1 A T scaffold427 ScafM INDEL 0031.scaffold00123 845507 13 GAGGGATATGTAC ............. scaffold427 ScafM SNP 0031.scaffold00123 848150 1 C T scaffold140 ScafM INDEL 0031.scaffold00123 848155 1 T . scaffold140 ScafM SNP 0031.scaffold00123 853491 1 A G scaffold140 ScafM SNP 0031.scaffold00123 853498 1 T C scaffold140 ScafM SNP 0031.scaffold00123 854169 1 G A scaffold26502 ScafM SNP 0031.scaffold00123 854172 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 854205 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 854246 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 854270 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 854295 1 A T scaffold26502 ScafM SNP 0031.scaffold00123 854303 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 854326 1 T A scaffold26502 ScafM SNP 0031.scaffold00123 854385 1 G A scaffold26502 ScafM SNP 0031.scaffold00123 854485 1 C T scaffold26502 ScafM SNP 0031.scaffold00123 854508 1 A C scaffold26502 ScafM INDEL 0031.scaffold00123 854522 5 TATTT ..... scaffold26502 ScafM SNP 0031.scaffold00123 854564 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 854688 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 854718 1 G T scaffold26502 ScafM SNP 0031.scaffold00123 854743 1 C A scaffold26502 ScafM SNP 0031.scaffold00123 854745 1 A C scaffold26502 ScafM SNP 0031.scaffold00123 854796 1 G T scaffold26502 ScafM SNP 0031.scaffold00123 854877 1 C T scaffold26502 ScafM SNP 0031.scaffold00123 854882 1 T A scaffold26502 ScafM SNP 0031.scaffold00123 854888 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 854898 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 854900 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 854985 2 CA TG scaffold26502 ScafM SNP 0031.scaffold00123 855016 1 A G scaffold26502 ScafM SNP 0031.scaffold00123 855019 1 A C scaffold26502 ScafM SNP 0031.scaffold00123 855038 1 G A scaffold26502 ScafM SNP 0031.scaffold00123 855080 1 G T scaffold26502 ScafM SNP 0031.scaffold00123 855090 1 G A scaffold26502 ScafM SNP 0031.scaffold00123 855096 1 C T scaffold26502 ScafM SNP 0031.scaffold00123 855177 1 G A scaffold26502 ScafM SNP 0031.scaffold00123 855188 1 C T scaffold26502 ScafM SNP 0031.scaffold00123 855202 1 T C scaffold26502 ScafM SNP 0031.scaffold00123 855235 2 CC AT scaffold26502 Both SNP 0031.scaffold00123 864470 1 T C scaffold140 ScafM INDEL 0031.scaffold00123 866331 1 . T scaffold140 ReadM SNP 0031.scaffold00123 883280 1 C T - ScafM SNP 0031.scaffold00123 892939 1 A T scaffold140 ScafM INDEL 0031.scaffold00123 892943 1 C . scaffold140 ScafM INDEL 0031.scaffold00123 893008 1 T . scaffold140 Both SNP 0031.scaffold00123 894278 1 A C scaffold140 ScafM SNP 0031.scaffold00123 902689 1 C A scaffold140 Both INDEL 0031.scaffold00123 904600 1 . T scaffold140 ReadM SNP 0031.scaffold00123 910532 1 T C - ScafM INDEL 0031.scaffold00123 913288 3 GAC ... scaffold140 ScafM INDEL 0031.scaffold00123 913293 1 A . scaffold140 ScafM INDEL 0031.scaffold00123 913295 2 AA .. scaffold140 ReadM SNP 0031.scaffold00123 954243 1 A T - ReadM SNP 0031.scaffold00123 971848 1 A C - ReadM SNP 0031.scaffold00123 975671 1 G C - ReadM SNP 0031.scaffold00123 993989 1 A G - ScafM SNP 0031.scaffold00123 1003215 2 TT AC scaffold6947 ScafM INDEL 0031.scaffold00123 1014770 1 T . scaffold6947 ScafM INDEL 0031.scaffold00123 1014776 11 AGATGATCCCA ........... scaffold6947 ScafM INDEL 0031.scaffold00123 1017118 1 . T scaffold6947 ReadM SNP 0031.scaffold00123 1047155 1 C T - ScafM INDEL 0031.scaffold00123 1047769 2 .. AA scaffold1967 ScafM SNP 0031.scaffold00123 1047771 1 T A scaffold1967 ScafM INDEL 0031.scaffold00123 1047776 1 . T scaffold1967 ScafM SNP 0031.scaffold00123 1047812 1 A G scaffold1967 ScafM SNP 0031.scaffold00123 1047872 1 G A scaffold1967 ScafM SNP 0031.scaffold00123 1047883 1 T C scaffold1967 ScafM SNP 0031.scaffold00123 1047916 1 G T scaffold1967 ScafM SNP 0031.scaffold00123 1047931 1 A G scaffold1967 ScafM SNP 0031.scaffold00123 1047982 1 T G scaffold1967 ScafM SNP 0031.scaffold00123 1048067 1 T C scaffold1967 ScafM INDEL 0031.scaffold00123 1048114 7 ....... CAAGAAT scaffold1967 ScafM SNP 0031.scaffold00123 1048181 2 GT AA scaffold1967 ScafM SNP 0031.scaffold00123 1048230 1 A G scaffold1967 ScafM SNP 0031.scaffold00123 1048241 1 A T scaffold1967 ScafM SNP 0031.scaffold00123 1048273 1 T C scaffold1967 ScafM SNP 0031.scaffold00123 1048291 1 G A scaffold1967 ScafM INDEL 0031.scaffold00123 1048311 52 .................................................... AATCTACATTACATTGTGTAATTTACCACAAATTTGAATCAGTATATTGAAT scaffold1967 ScafM SNP 0031.scaffold00123 1048320 1 C A scaffold1967 ScafM SNP 0031.scaffold00123 1048512 1 T C scaffold1967 ScafM SNP 0031.scaffold00123 1048536 1 T A scaffold1967 ScafM SNP 0031.scaffold00123 1048784 1 A G scaffold1967 ScafM SNP 0031.scaffold00123 1061832 1 A T scaffold1967 ScafM INDEL 0031.scaffold00123 1075264 2 .. GA scaffold1967 ScafM INDEL 0031.scaffold00123 1075265 3 ... TTC scaffold1967 Both INDEL 0031.scaffold00123 1080699 2 AC .. scaffold1967 ReadM SNP 0031.scaffold00123 1112533 1 T C - ReadM SNP 0031.scaffold00123 1116680 1 A T - ScafM SNP 0032.scaffold00124 4934 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 4942 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 4957 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 4968 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 4979 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 4985 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 4987 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 4992 1 C A scaffold2830 ScafM SNP 0032.scaffold00124 5001 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 5005 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 5018 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 5052 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 5101 1 A C scaffold2830 ScafM INDEL 0032.scaffold00124 5126 7 AATTCCA ....... scaffold2830 ScafM SNP 0032.scaffold00124 5172 1 A T scaffold2830 ScafM SNP 0032.scaffold00124 5215 1 G T scaffold2830 ScafM SNP 0032.scaffold00124 5234 1 T C scaffold2830 Both INDEL 0032.scaffold00124 5240 1 A . scaffold2830 ScafM SNP 0032.scaffold00124 5289 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 5292 1 G C scaffold2830 ScafM INDEL 0032.scaffold00124 5299 2 AG .. scaffold2830 ScafM SNP 0032.scaffold00124 5337 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 5343 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 5346 1 . A scaffold2830 ScafM SNP 0032.scaffold00124 5416 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 5454 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 5469 2 AT GA scaffold2830 ScafM INDEL 0032.scaffold00124 5507 7 AGGAGAG ....... scaffold2830 ScafM SNP 0032.scaffold00124 5532 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 5538 1 A T scaffold2830 ScafM SNP 0032.scaffold00124 5549 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 5565 2 GG TA scaffold2830 ScafM SNP 0032.scaffold00124 5576 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 5643 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 5655 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 5659 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 5669 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 5703 3 ATA ... scaffold2830 ScafM SNP 0032.scaffold00124 5710 1 C G scaffold2830 ScafM SNP 0032.scaffold00124 5724 2 GG AC scaffold2830 ScafM SNP 0032.scaffold00124 5737 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 5749 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 5778 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 5781 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 5797 1 . G scaffold2830 ScafM INDEL 0032.scaffold00124 5821 1 . C scaffold2830 ScafM SNP 0032.scaffold00124 5824 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 5842 1 A T scaffold2830 ReadM SNP 0032.scaffold00124 6018 1 G A - ReadM SNP 0032.scaffold00124 6020 1 G T - ReadM SNP 0032.scaffold00124 6151 1 T G - ReadM SNP 0032.scaffold00124 6183 1 G A - ReadM SNP 0032.scaffold00124 6200 1 C G - ScafM SNP 0032.scaffold00124 6339 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 6353 1 C T scaffold2830 Both SNP 0032.scaffold00124 6385 1 A G scaffold2830 Both SNP 0032.scaffold00124 6433 1 G T scaffold2830 Both SNP 0032.scaffold00124 6500 1 A G scaffold2830 Both SNP 0032.scaffold00124 6521 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 6545 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 6557 1 T G scaffold2830 Both SNP 0032.scaffold00124 6661 1 C T scaffold2830 Both SNP 0032.scaffold00124 6785 1 G T scaffold2830 Both SNP 0032.scaffold00124 6791 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 6862 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 6866 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 6871 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 6888 1 C A scaffold2830 ScafM SNP 0032.scaffold00124 6896 1 A T scaffold2830 ScafM SNP 0032.scaffold00124 6958 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 6974 1 . G scaffold2830 ScafM SNP 0032.scaffold00124 6977 1 A T scaffold2830 ScafM INDEL 0032.scaffold00124 6979 1 . T scaffold2830 ScafM SNP 0032.scaffold00124 6984 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 7009 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 7036 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 7044 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 7051 1 G T scaffold2830 ScafM SNP 0032.scaffold00124 7061 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 7077 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 7080 1 G . scaffold2830 ScafM SNP 0032.scaffold00124 7118 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 7163 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 7176 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 7178 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 7183 2 .. TC scaffold2830 ReadM INDEL 0032.scaffold00124 7418 2 .. AA - ReadM SNP 0032.scaffold00124 7449 1 A T - ReadM SNP 0032.scaffold00124 7595 1 G T - ReadM SNP 0032.scaffold00124 7694 1 G T - ReadM INDEL 0032.scaffold00124 7699 2 TG .. - Both SNP 0032.scaffold00124 7854 1 C T scaffold2830 Both SNP 0032.scaffold00124 7864 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 7879 1 C G scaffold2830 ScafM SNP 0032.scaffold00124 7928 1 G C scaffold2830 ScafM INDEL 0032.scaffold00124 7932 1 G . scaffold2830 ScafM SNP 0032.scaffold00124 7965 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 7992 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 8044 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 8163 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 8167 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 8204 1 A . scaffold2830 ScafM SNP 0032.scaffold00124 8242 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 21188 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 21205 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 21242 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 21253 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 21260 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 21278 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 21303 1 C A scaffold2830 ScafM SNP 0032.scaffold00124 21312 1 G T scaffold2830 ScafM SNP 0032.scaffold00124 21334 1 A T scaffold2830 ReadM SNP 0032.scaffold00124 22497 1 C G - ReadM SNP 0032.scaffold00124 22526 1 G T - ReadM SNP 0032.scaffold00124 22528 1 T C - ReadM SNP 0032.scaffold00124 23090 1 T G - ReadM SNP 0032.scaffold00124 23094 1 C T - ReadM SNP 0032.scaffold00124 23467 1 G T - ReadM SNP 0032.scaffold00124 23551 1 A G - ReadM SNP 0032.scaffold00124 23566 1 A T - ReadM SNP 0032.scaffold00124 23654 1 A T - ReadM SNP 0032.scaffold00124 23916 1 A G - ReadM SNP 0032.scaffold00124 26416 1 T G - ScafM SNP 0032.scaffold00124 27080 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 27115 1 C G scaffold2830 ReadM SNP 0032.scaffold00124 51301 1 A G - ScafM SNP 0032.scaffold00124 51391 1 A G scaffold1099 ScafM INDEL 0032.scaffold00124 51408 1 T . scaffold1099 ScafM INDEL 0032.scaffold00124 51440 1 . C scaffold1099 ScafM SNP 0032.scaffold00124 51463 1 G A scaffold1099 ScafM SNP 0032.scaffold00124 51484 1 T A scaffold1099 ScafM SNP 0032.scaffold00124 51513 1 G A scaffold1099 ScafM SNP 0032.scaffold00124 51539 1 C A scaffold1099 ScafM SNP 0032.scaffold00124 51549 1 C A scaffold1099 ScafM SNP 0032.scaffold00124 51553 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 51570 1 C G scaffold1099 ScafM SNP 0032.scaffold00124 51582 1 T C scaffold1099 Both SNP 0032.scaffold00124 51610 1 A C scaffold1099 ScafM SNP 0032.scaffold00124 51637 1 C T scaffold1099 ScafM SNP 0032.scaffold00124 51708 1 G T scaffold1099 ScafM SNP 0032.scaffold00124 51715 1 C T scaffold1099 Both SNP 0032.scaffold00124 51719 1 T A scaffold1099 Both SNP 0032.scaffold00124 51845 1 A C scaffold1099 ScafM SNP 0032.scaffold00124 51892 1 C A scaffold1099 ScafM SNP 0032.scaffold00124 51895 1 C T scaffold1099 ScafM SNP 0032.scaffold00124 51954 1 C T scaffold1099 ScafM SNP 0032.scaffold00124 51982 2 CC TT scaffold1099 ScafM INDEL 0032.scaffold00124 52008 3 ... ATG scaffold1099 ScafM SNP 0032.scaffold00124 52019 1 A G scaffold1099 ScafM INDEL 0032.scaffold00124 52046 2 TG .. scaffold1099 ScafM SNP 0032.scaffold00124 52054 1 C T scaffold1099 ScafM SNP 0032.scaffold00124 52081 1 T C scaffold1099 ScafM SNP 0032.scaffold00124 52177 1 A C scaffold1099 ScafM SNP 0032.scaffold00124 52205 1 C T scaffold1099 ScafM INDEL 0032.scaffold00124 52235 7 CTGCAAC ....... scaffold1099 ScafM INDEL 0032.scaffold00124 52245 4 AAGG ...C scaffold1099 ScafM SNP 0032.scaffold00124 52252 1 C T scaffold1099 ScafM SNP 0032.scaffold00124 52277 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 52331 1 T C scaffold1099 ScafM SNP 0032.scaffold00124 52334 1 T A scaffold1099 ScafM SNP 0032.scaffold00124 52353 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 52357 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 52368 1 T G scaffold1099 ScafM SNP 0032.scaffold00124 52400 1 T C scaffold1099 ScafM SNP 0032.scaffold00124 52448 1 T C scaffold1099 ScafM SNP 0032.scaffold00124 52459 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 52466 2 GT AC scaffold1099 ScafM INDEL 0032.scaffold00124 52473 5 ..... TGCCC scaffold1099 ScafM SNP 0032.scaffold00124 52478 1 A G scaffold1099 ScafM SNP 0032.scaffold00124 52498 1 C A scaffold1099 ScafM SNP 0032.scaffold00124 52502 1 A T scaffold1099 ScafM INDEL 0032.scaffold00124 52525 1 C . scaffold1099 ScafM SNP 0032.scaffold00124 52541 1 A T scaffold1099 ScafM SNP 0032.scaffold00124 52564 1 G A scaffold1099 ScafM INDEL 0032.scaffold00124 52583 5 ..... ATATA scaffold1099 ScafM INDEL 0032.scaffold00124 52584 1 . A scaffold1099 ScafM SNP 0032.scaffold00124 63774 1 T A scaffold5315 ScafM SNP 0032.scaffold00124 63848 1 C G scaffold5315 ScafM SNP 0032.scaffold00124 63875 1 G C scaffold5315 ScafM SNP 0032.scaffold00124 63898 1 T C scaffold5315 ScafM SNP 0032.scaffold00124 63908 1 G A scaffold5315 ScafM SNP 0032.scaffold00124 63920 1 A G scaffold5315 ScafM SNP 0032.scaffold00124 63945 1 C G scaffold5315 ScafM SNP 0032.scaffold00124 63948 1 G A scaffold5315 ScafM INDEL 0032.scaffold00124 63963 1 A . scaffold5315 ScafM SNP 0032.scaffold00124 63972 1 T A scaffold5315 ScafM SNP 0032.scaffold00124 63976 1 T C scaffold5315 ScafM INDEL 0032.scaffold00124 64015 1 T . scaffold5315 ScafM SNP 0032.scaffold00124 64040 1 G A scaffold8914 ScafM SNP 0032.scaffold00124 64043 1 C A scaffold8914 ScafM SNP 0032.scaffold00124 64081 1 T C scaffold8914 ScafM SNP 0032.scaffold00124 64099 1 G T scaffold8914 ScafM INDEL 0032.scaffold00124 64150 2 .T CA scaffold8914 ReadM INDEL 0032.scaffold00124 64151 1 . A - ScafM SNP 0032.scaffold00124 64169 1 A C scaffold8914 ReadM SNP 0032.scaffold00124 64248 1 C A - ScafM SNP 0032.scaffold00124 64261 1 C G scaffold331 ScafM SNP 0032.scaffold00124 64288 1 A G scaffold331 ScafM SNP 0032.scaffold00124 64293 1 C T scaffold331 ScafM SNP 0032.scaffold00124 64306 1 A T scaffold331 ScafM SNP 0032.scaffold00124 64319 2 TA CG scaffold331 ScafM SNP 0032.scaffold00124 64326 1 C T scaffold331 ScafM SNP 0032.scaffold00124 64348 1 C T scaffold331 ScafM SNP 0032.scaffold00124 64357 1 T C scaffold331 ScafM SNP 0032.scaffold00124 64402 1 G A scaffold331 ScafM SNP 0032.scaffold00124 64410 1 T A scaffold331 ScafM SNP 0032.scaffold00124 64443 1 C G scaffold331 ScafM SNP 0032.scaffold00124 64446 1 T C scaffold331 ScafM SNP 0032.scaffold00124 64464 1 A G scaffold331 ScafM SNP 0032.scaffold00124 64478 1 G A scaffold331 ScafM SNP 0032.scaffold00124 64501 1 T C scaffold331 ScafM INDEL 0032.scaffold00124 64525 7 AATAAAG ....... scaffold331 ScafM SNP 0032.scaffold00124 64562 1 C G scaffold331 ScafM SNP 0032.scaffold00124 64634 1 T A scaffold331 ScafM SNP 0032.scaffold00124 64639 1 A T scaffold331 Both SNP 0032.scaffold00124 64688 1 T C scaffold331 ScafM SNP 0032.scaffold00124 64750 1 A G scaffold331 ScafM SNP 0032.scaffold00124 64754 1 A T scaffold331 ScafM INDEL 0032.scaffold00124 64756 5 ....A TTTGT scaffold331 ScafM SNP 0032.scaffold00124 64780 1 A G scaffold331 ScafM SNP 0032.scaffold00124 64790 1 G A scaffold331 ScafM SNP 0032.scaffold00124 64809 1 G C scaffold331 ScafM SNP 0032.scaffold00124 64814 1 T C scaffold331 ScafM SNP 0032.scaffold00124 64833 1 A T scaffold331 ScafM SNP 0032.scaffold00124 64850 1 G A scaffold331 ScafM SNP 0032.scaffold00124 64856 1 C A scaffold331 ScafM INDEL 0032.scaffold00124 64893 2 TC .. scaffold331 ScafM INDEL 0032.scaffold00124 64905 1 C . scaffold331 ScafM SNP 0032.scaffold00124 64929 1 T A scaffold331 ScafM SNP 0032.scaffold00124 64933 1 A G scaffold331 ScafM SNP 0032.scaffold00124 64941 1 C A scaffold331 ScafM SNP 0032.scaffold00124 65255 1 G A scaffold12926 Both SNP 0032.scaffold00124 65304 1 A G scaffold12926 Both SNP 0032.scaffold00124 65327 1 G A scaffold12926 Both SNP 0032.scaffold00124 65366 1 C G scaffold12926 Both SNP 0032.scaffold00124 65381 1 T C scaffold12926 Both SNP 0032.scaffold00124 65444 1 G C scaffold12926 Both SNP 0032.scaffold00124 65468 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 65498 1 A C scaffold12926 ScafM SNP 0032.scaffold00124 65516 1 T G scaffold12926 ScafM SNP 0032.scaffold00124 65592 1 A T scaffold12926 ScafM SNP 0032.scaffold00124 65645 1 A C scaffold12926 ScafM SNP 0032.scaffold00124 65651 1 A C scaffold12926 ScafM SNP 0032.scaffold00124 65656 1 A G scaffold12926 ReadM SNP 0032.scaffold00124 65888 1 C T - ReadM INDEL 0032.scaffold00124 65912 1 A . - Both SNP 0032.scaffold00124 65941 1 G A scaffold12926 Both SNP 0032.scaffold00124 66103 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66121 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66128 1 T A scaffold12926 ScafM SNP 0032.scaffold00124 66136 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66144 1 C T scaffold12926 ScafM SNP 0032.scaffold00124 66146 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66150 1 T C scaffold12926 ScafM SNP 0032.scaffold00124 66179 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66185 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66191 1 C T scaffold12926 ScafM SNP 0032.scaffold00124 66202 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66220 1 A C scaffold12926 ScafM SNP 0032.scaffold00124 66244 2 GC AT scaffold12926 ScafM INDEL 0032.scaffold00124 66255 7 ....... CAGAAGT scaffold12926 ScafM SNP 0032.scaffold00124 66258 1 G T scaffold12926 ScafM SNP 0032.scaffold00124 66266 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66284 1 C A scaffold12926 ScafM SNP 0032.scaffold00124 66289 1 T C scaffold12926 ScafM SNP 0032.scaffold00124 66298 1 A T scaffold12926 Both SNP 0032.scaffold00124 66317 1 G A scaffold12926 Both SNP 0032.scaffold00124 66383 1 A G scaffold12926 Both SNP 0032.scaffold00124 66437 1 C A scaffold12926 ScafM SNP 0032.scaffold00124 66453 1 T A scaffold12926 ScafM SNP 0032.scaffold00124 66466 1 G T scaffold12926 ScafM SNP 0032.scaffold00124 66489 1 G A scaffold12926 ScafM INDEL 0032.scaffold00124 66504 1 T . scaffold12926 ScafM SNP 0032.scaffold00124 66542 1 T G scaffold12926 ScafM SNP 0032.scaffold00124 66549 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66611 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66629 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66696 1 A T scaffold12926 ScafM SNP 0032.scaffold00124 66702 1 T C scaffold12926 ScafM SNP 0032.scaffold00124 66706 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66733 1 T C scaffold12926 ScafM SNP 0032.scaffold00124 66737 1 T G scaffold12926 ScafM SNP 0032.scaffold00124 66740 1 C A scaffold12926 ScafM SNP 0032.scaffold00124 66758 1 A G scaffold12926 ScafM SNP 0032.scaffold00124 66770 1 G A scaffold12926 ScafM SNP 0032.scaffold00124 66795 1 T C scaffold12926 ScafM SNP 0032.scaffold00124 67051 1 A G scaffold18795 ScafM SNP 0032.scaffold00124 67087 1 A G scaffold18795 ScafM SNP 0032.scaffold00124 76526 1 C T scaffold2830 Both SNP 0032.scaffold00124 76589 1 T A scaffold2830 Both SNP 0032.scaffold00124 76616 1 C T scaffold2830 Both INDEL 0032.scaffold00124 76623 1 . A scaffold2830 ScafM SNP 0032.scaffold00124 76730 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 76775 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 76792 3 TAG ... scaffold2830 ScafM SNP 0032.scaffold00124 76797 1 A T scaffold2830 ScafM INDEL 0032.scaffold00124 76840 1 . A scaffold2830 ScafM SNP 0032.scaffold00124 76889 2 GA AG scaffold2830 Both SNP 0032.scaffold00124 76906 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 77012 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 77031 1 C T scaffold2830 Both SNP 0032.scaffold00124 77059 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 77122 1 T A scaffold2830 ScafM INDEL 0032.scaffold00124 77147 3 AGA ... scaffold2830 Both SNP 0032.scaffold00124 77197 1 A G scaffold2830 Both SNP 0032.scaffold00124 77295 1 C T scaffold2830 Both SNP 0032.scaffold00124 77315 1 G T scaffold2830 ScafM SNP 0032.scaffold00124 77333 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 77342 1 T C scaffold2830 Both SNP 0032.scaffold00124 77377 1 T G scaffold2830 Both SNP 0032.scaffold00124 77422 1 C T scaffold2830 ReadM SNP 0032.scaffold00124 77628 1 A T - ReadM SNP 0032.scaffold00124 77672 1 G A - ReadM SNP 0032.scaffold00124 77711 1 A G - ReadM SNP 0032.scaffold00124 77741 1 C T - ScafM INDEL 0032.scaffold00124 77823 2 .C TG scaffold2830 ScafM SNP 0032.scaffold00124 77842 1 C T scaffold2830 Both SNP 0032.scaffold00124 77859 1 T A scaffold2830 Both INDEL 0032.scaffold00124 77879 1 . T scaffold2830 Both SNP 0032.scaffold00124 77973 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 78006 2 GG AA scaffold2830 ScafM SNP 0032.scaffold00124 78018 1 A G scaffold2830 ReadM SNP 0032.scaffold00124 78134 1 C T - ReadM SNP 0032.scaffold00124 78198 1 C A - ReadM SNP 0032.scaffold00124 78214 1 G C - ScafM SNP 0032.scaffold00124 78334 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 78348 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 78399 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 78407 1 C T scaffold2830 ScafM INDEL 0032.scaffold00124 78435 7 ....... AGTTTTC scaffold2830 ScafM INDEL 0032.scaffold00124 78438 3 ... TAC scaffold2830 ScafM SNP 0032.scaffold00124 78449 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 78458 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 78468 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 78479 2 AG TA scaffold2830 ReadM SNP 0032.scaffold00124 78524 1 C T - ReadM SNP 0032.scaffold00124 78550 1 G A - ReadM SNP 0032.scaffold00124 78595 1 T A - ReadM SNP 0032.scaffold00124 78602 1 G A - ReadM INDEL 0032.scaffold00124 78806 1 . T - ReadM SNP 0032.scaffold00124 78834 1 G A - ReadM SNP 0032.scaffold00124 78876 1 G C - ReadM SNP 0032.scaffold00124 78970 1 A C - ReadM SNP 0032.scaffold00124 79118 1 A G - ScafM SNP 0032.scaffold00124 79479 1 T G scaffold2830 ScafM INDEL 0032.scaffold00124 79490 1 . C scaffold2830 ScafM SNP 0032.scaffold00124 79515 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 79517 3 ... TCT scaffold2830 ScafM SNP 0032.scaffold00124 79522 1 A T scaffold2830 Both SNP 0032.scaffold00124 79582 1 A C scaffold2830 Both SNP 0032.scaffold00124 79610 1 T A scaffold2830 Both SNP 0032.scaffold00124 79623 1 C A scaffold2830 ScafM INDEL 0032.scaffold00124 79649 4 GCCG .... scaffold2830 ScafM SNP 0032.scaffold00124 79658 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 79665 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 79672 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 79674 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 79682 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 79968 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 79999 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 80001 1 C G scaffold2830 ScafM SNP 0032.scaffold00124 80005 1 A C scaffold2830 Both SNP 0032.scaffold00124 80099 1 T C scaffold2830 Both SNP 0032.scaffold00124 80105 1 A T scaffold2830 Both INDEL 0032.scaffold00124 80121 1 . A scaffold2830 Both SNP 0032.scaffold00124 80141 1 T C scaffold2830 Both SNP 0032.scaffold00124 80197 1 C T scaffold2830 Both SNP 0032.scaffold00124 80228 1 T C scaffold2830 Both SNP 0032.scaffold00124 80343 1 G C scaffold2830 Both SNP 0032.scaffold00124 80374 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 80525 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 80527 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 80539 2 TA .. scaffold2830 ScafM SNP 0032.scaffold00124 80589 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 80615 2 AA .. scaffold2830 Both SNP 0032.scaffold00124 80619 1 T C scaffold2830 ReadM SNP 0032.scaffold00124 80791 1 C T - Both SNP 0032.scaffold00124 81310 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 81328 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 81331 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 81390 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 81392 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 81441 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 81443 1 T C scaffold2830 ScafM INDEL 0032.scaffold00124 81648 2 .. GC scaffold2830 ScafM SNP 0032.scaffold00124 81773 1 C G scaffold2830 ScafM SNP 0032.scaffold00124 81851 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 81878 1 C T scaffold2830 ReadM SNP 0032.scaffold00124 82327 1 C T - Both SNP 0032.scaffold00124 82447 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 82467 18 AAGCAGATGTTTCCTCTA .................. scaffold2830 ReadM SNP 0032.scaffold00124 82555 1 A G - Both SNP 0032.scaffold00124 82803 1 A C scaffold2830 Both SNP 0032.scaffold00124 83085 1 C T scaffold2830 Both INDEL 0032.scaffold00124 83184 1 A . scaffold2830 Both SNP 0032.scaffold00124 83223 1 G A scaffold2830 ReadM SNP 0032.scaffold00124 83251 1 T C - ReadM SNP 0032.scaffold00124 83326 1 A G - ReadM SNP 0032.scaffold00124 83434 1 C T - ReadM SNP 0032.scaffold00124 83453 1 T G - ReadM SNP 0032.scaffold00124 83534 1 C T - ReadM SNP 0032.scaffold00124 83596 1 T C - ReadM SNP 0032.scaffold00124 83605 1 C T - Both SNP 0032.scaffold00124 83799 1 A T scaffold2830 Both SNP 0032.scaffold00124 83890 1 A T scaffold2830 Both SNP 0032.scaffold00124 83907 1 G C scaffold2830 ScafM SNP 0032.scaffold00124 83944 1 T C scaffold2830 Both SNP 0032.scaffold00124 84003 1 C A scaffold2830 Both SNP 0032.scaffold00124 84060 1 T A scaffold2830 Both SNP 0032.scaffold00124 84105 1 G T scaffold2830 Both INDEL 0032.scaffold00124 84141 1 . T scaffold2830 ScafM SNP 0032.scaffold00124 84146 1 G T scaffold2830 Both SNP 0032.scaffold00124 84363 1 T G scaffold2830 Both INDEL 0032.scaffold00124 84415 2 .. AT scaffold2830 Both SNP 0032.scaffold00124 84445 1 T G scaffold2830 Both SNP 0032.scaffold00124 84720 1 C G scaffold2830 Both SNP 0032.scaffold00124 84808 1 G A scaffold2830 Both SNP 0032.scaffold00124 84863 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 84965 1 G A scaffold2830 Both SNP 0032.scaffold00124 85031 1 T C scaffold2830 Both SNP 0032.scaffold00124 85101 1 C T scaffold2830 Both SNP 0032.scaffold00124 85211 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 85224 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 85235 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 85245 1 T C scaffold2830 Both SNP 0032.scaffold00124 85309 1 G A scaffold2830 ScafM SNP 0032.scaffold00124 85449 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 85522 1 T A scaffold2830 ReadM SNP 0032.scaffold00124 85702 1 A T - ReadM SNP 0032.scaffold00124 85786 1 C A - ReadM SNP 0032.scaffold00124 85878 1 A G - ReadM SNP 0032.scaffold00124 85946 1 G A - ScafM SNP 0032.scaffold00124 86045 1 A T scaffold2830 Both SNP 0032.scaffold00124 86128 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 86362 1 T C scaffold2830 ScafM SNP 0032.scaffold00124 86458 1 T G scaffold2830 ScafM SNP 0032.scaffold00124 86514 1 G A scaffold2830 ScafM INDEL 0032.scaffold00124 86522 1 . A scaffold2830 ScafM SNP 0032.scaffold00124 86528 1 C A scaffold2830 ScafM SNP 0032.scaffold00124 86603 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 86711 1 C G scaffold2830 ScafM SNP 0032.scaffold00124 87038 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 87165 1 T A scaffold2830 Both SNP 0032.scaffold00124 87405 1 G A scaffold2830 Both SNP 0032.scaffold00124 87559 1 C G scaffold2830 Both SNP 0032.scaffold00124 87647 1 T C scaffold2830 ReadM SNP 0032.scaffold00124 88312 1 A G - Both SNP 0032.scaffold00124 88362 1 A G scaffold2830 Both SNP 0032.scaffold00124 88384 1 A T scaffold2830 ScafM SNP 0032.scaffold00124 88415 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 88425 1 A C scaffold2830 ScafM SNP 0032.scaffold00124 88467 1 G C scaffold2830 ScafM INDEL 0032.scaffold00124 88488 1 A . scaffold2830 ScafM INDEL 0032.scaffold00124 88491 12 CCAATTGACATT ............ scaffold2830 ScafM INDEL 0032.scaffold00124 88507 1 T . scaffold2830 ScafM INDEL 0032.scaffold00124 88510 9 AGCCAAAAA ......... scaffold2830 ScafM INDEL 0032.scaffold00124 88522 2 AA .T scaffold2830 ScafM SNP 0032.scaffold00124 88535 1 C T scaffold2830 ScafM SNP 0032.scaffold00124 88566 1 A T scaffold2830 Both SNP 0032.scaffold00124 88738 1 A T scaffold2830 ScafM SNP 0032.scaffold00124 88745 2 CG TA scaffold2830 ScafM SNP 0032.scaffold00124 88796 1 A G scaffold2830 ScafM INDEL 0032.scaffold00124 88803 2 .. AA scaffold2830 ScafM INDEL 0032.scaffold00124 88815 1 A . scaffold2830 Both SNP 0032.scaffold00124 88843 1 T C scaffold2830 Both SNP 0032.scaffold00124 88847 1 T A scaffold2830 ScafM SNP 0032.scaffold00124 88972 4 GTCC AAAG scaffold2830 ScafM INDEL 0032.scaffold00124 88977 8 TCCTTTTT ........ scaffold2830 ScafM INDEL 0032.scaffold00124 88986 1 T . scaffold2830 Both SNP 0032.scaffold00124 89079 1 C T scaffold2830 ReadM SNP 0032.scaffold00124 89123 1 C T - ScafM SNP 0032.scaffold00124 89269 1 T A scaffold2830 Both SNP 0032.scaffold00124 89551 1 T G scaffold2830 Both SNP 0032.scaffold00124 89633 1 T A scaffold2830 Both SNP 0032.scaffold00124 89678 1 A G scaffold2830 ScafM SNP 0032.scaffold00124 89809 1 T A scaffold2830 Both SNP 0032.scaffold00124 90003 1 T G scaffold2830 ReadM SNP 0032.scaffold00124 90026 1 G T - ReadM SNP 0032.scaffold00124 90178 1 C T - ReadM SNP 0032.scaffold00124 90183 1 A G - Both SNP 0032.scaffold00124 90531 1 C T scaffold2830 ReadM SNP 0032.scaffold00124 90791 1 A C - ReadM SNP 0032.scaffold00124 90852 1 G T - ReadM SNP 0032.scaffold00124 91119 1 A G - ReadM SNP 0032.scaffold00124 91141 1 G A - ReadM SNP 0032.scaffold00124 91185 1 G A - ReadM SNP 0032.scaffold00124 91318 1 G T - ReadM SNP 0032.scaffold00124 91447 1 T G - ScafM SNP 0032.scaffold00124 102182 1 G A scaffold8891 ReadM SNP 0032.scaffold00124 103653 1 C T - ReadM SNP 0032.scaffold00124 103672 1 T C - ReadM SNP 0032.scaffold00124 104199 1 G A - ReadM SNP 0032.scaffold00124 104348 1 A T - ReadM SNP 0032.scaffold00124 104362 1 C T - ReadM SNP 0032.scaffold00124 104418 1 G C - ReadM SNP 0032.scaffold00124 104596 1 C T - ReadM SNP 0032.scaffold00124 104736 1 A G - ReadM SNP 0032.scaffold00124 104775 1 C A - ReadM SNP 0032.scaffold00124 104818 1 C T - ReadM SNP 0032.scaffold00124 104841 1 A G - ScafM SNP 0032.scaffold00124 107894 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 107982 1 T G scaffold8891 Both SNP 0032.scaffold00124 108217 1 T C scaffold8891 ReadM SNP 0032.scaffold00124 108543 1 A G - ReadM SNP 0032.scaffold00124 108640 1 T A - Both SNP 0032.scaffold00124 108923 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 108996 1 T G scaffold8891 ScafM SNP 0032.scaffold00124 109709 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 109724 2 CC TT scaffold8891 ScafM INDEL 0032.scaffold00124 109830 1 T . scaffold8891 ScafM SNP 0032.scaffold00124 109833 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 109850 1 T C scaffold8891 Both INDEL 0032.scaffold00124 110057 1 T . scaffold8891 ScafM INDEL 0032.scaffold00124 110107 9 GGAAGATTT ......... scaffold8891 ScafM SNP 0032.scaffold00124 110335 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 110387 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 110390 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 110451 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 110638 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 110699 1 G A scaffold8891 ReadM SNP 0032.scaffold00124 112723 1 A T - ReadM SNP 0032.scaffold00124 112823 1 T A - ReadM SNP 0032.scaffold00124 113025 1 G T - ReadM SNP 0032.scaffold00124 114698 1 A T - Both SNP 0032.scaffold00124 114800 1 G C scaffold8891 Both SNP 0032.scaffold00124 114893 1 T A scaffold8891 ReadM INDEL 0032.scaffold00124 115251 1 G . - ScafM SNP 0032.scaffold00124 115641 1 G T scaffold8891 ReadM SNP 0032.scaffold00124 115677 1 T C - ReadM SNP 0032.scaffold00124 115707 1 T C - ReadM SNP 0032.scaffold00124 115764 1 C T - ReadM SNP 0032.scaffold00124 115930 1 G T - ScafM INDEL 0032.scaffold00124 116014 2 TT .. scaffold8891 ScafM SNP 0032.scaffold00124 116037 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 116093 1 C G scaffold8891 ScafM INDEL 0032.scaffold00124 116114 1 . A scaffold8891 ScafM INDEL 0032.scaffold00124 116128 6 ...... AAATAG scaffold8891 ScafM SNP 0032.scaffold00124 116162 1 T G scaffold8891 Both SNP 0032.scaffold00124 116202 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 116258 1 A T scaffold8891 ReadM SNP 0032.scaffold00124 116690 1 T G - Both SNP 0032.scaffold00124 116838 1 G A scaffold8891 Both SNP 0032.scaffold00124 116872 1 A G scaffold8891 ReadM SNP 0032.scaffold00124 116964 1 C T - ReadM SNP 0032.scaffold00124 117031 1 A G - ReadM INDEL 0032.scaffold00124 117047 1 . C - ReadM SNP 0032.scaffold00124 117323 1 G C - ReadM SNP 0032.scaffold00124 117380 1 A G - ReadM SNP 0032.scaffold00124 117584 1 G C - ReadM SNP 0032.scaffold00124 117754 1 A G - ScafM SNP 0032.scaffold00124 117961 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 118244 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 118247 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 119449 1 T A scaffold8891 ScafM SNP 0032.scaffold00124 119456 1 C T scaffold8891 Both SNP 0032.scaffold00124 119676 1 A G scaffold8891 Both SNP 0032.scaffold00124 119710 1 C T scaffold8891 Both SNP 0032.scaffold00124 119906 1 G C scaffold8891 ReadM SNP 0032.scaffold00124 120060 1 A G - Both INDEL 0032.scaffold00124 120397 1 . A scaffold8891 Both SNP 0032.scaffold00124 120617 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 120672 1 A G scaffold8891 ScafM INDEL 0032.scaffold00124 120674 4 CAAA .... scaffold8891 ScafM SNP 0032.scaffold00124 120679 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 120687 1 T G scaffold8891 ReadM SNP 0032.scaffold00124 120996 1 G A - ReadM SNP 0032.scaffold00124 121088 1 T C - ReadM SNP 0032.scaffold00124 121111 1 A G - ReadM SNP 0032.scaffold00124 121161 1 C T - ReadM SNP 0032.scaffold00124 121594 1 A C - ReadM SNP 0032.scaffold00124 121984 1 G T - ReadM SNP 0032.scaffold00124 121997 1 C A - ReadM SNP 0032.scaffold00124 122003 1 C T - ReadM SNP 0032.scaffold00124 122045 1 C A - ReadM SNP 0032.scaffold00124 122080 1 G A - ReadM SNP 0032.scaffold00124 122352 1 G A - ReadM SNP 0032.scaffold00124 122520 1 C T - ReadM SNP 0032.scaffold00124 122594 1 T A - ScafM SNP 0032.scaffold00124 129483 1 G A scaffold41583 ScafM SNP 0032.scaffold00124 129504 1 T A scaffold41583 ScafM INDEL 0032.scaffold00124 129526 2 .. AT scaffold41583 ScafM SNP 0032.scaffold00124 133866 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 133962 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 133985 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 134005 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 134025 1 G T scaffold8891 ScafM INDEL 0032.scaffold00124 134047 4 .... AAAA scaffold8891 ReadM INDEL 0032.scaffold00124 134070 1 . A - ReadM SNP 0032.scaffold00124 134125 1 T C - ReadM SNP 0032.scaffold00124 134153 1 T A - ReadM SNP 0032.scaffold00124 134183 1 A C - ReadM SNP 0032.scaffold00124 134525 2 TT AC - ReadM SNP 0032.scaffold00124 134593 1 T C - ReadM SNP 0032.scaffold00124 134685 1 C G - ReadM SNP 0032.scaffold00124 134984 1 C T - ReadM INDEL 0032.scaffold00124 137071 1 A . - ReadM SNP 0032.scaffold00124 137133 1 A C - Both SNP 0032.scaffold00124 137389 1 C T scaffold8891 Both SNP 0032.scaffold00124 137558 1 G C scaffold8891 ScafM SNP 0032.scaffold00124 137594 1 T A scaffold8891 ReadM SNP 0032.scaffold00124 137789 1 T C - Both SNP 0032.scaffold00124 137837 1 G A scaffold8891 Both SNP 0032.scaffold00124 137845 1 G T scaffold8891 Both SNP 0032.scaffold00124 137879 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 137990 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 138002 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 138006 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 138009 1 G A scaffold8891 ScafM INDEL 0032.scaffold00124 138068 3 ... AAA scaffold8891 ScafM SNP 0032.scaffold00124 138069 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 138203 1 T A scaffold8891 ScafM SNP 0032.scaffold00124 138252 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 138320 1 A C scaffold8891 ScafM SNP 0032.scaffold00124 138731 1 T C scaffold8891 ScafM INDEL 0032.scaffold00124 138924 35 ATTCATGTCAGATTATTTTGGATAGGTTAAGTATG ................................... scaffold8891 ScafM INDEL 0032.scaffold00124 138963 6 TGACTG ...... scaffold8891 ScafM INDEL 0032.scaffold00124 138973 5 AGGTT ..... scaffold8891 ScafM INDEL 0032.scaffold00124 138981 9 TTATTCGAA ......... scaffold8891 ScafM SNP 0032.scaffold00124 139016 1 A G scaffold8891 ScafM INDEL 0032.scaffold00124 139022 1 . A scaffold8891 ScafM SNP 0032.scaffold00124 139036 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 139048 1 C T scaffold8891 Both INDEL 0032.scaffold00124 139391 1 A . scaffold8891 Both SNP 0032.scaffold00124 139451 1 C G scaffold8891 ScafM INDEL 0032.scaffold00124 139912 16 ................ ATAATTTAGGGAGAAA scaffold8891 Both SNP 0032.scaffold00124 140234 1 G A scaffold8891 Both SNP 0032.scaffold00124 140659 1 A G scaffold8891 ScafM INDEL 0032.scaffold00124 140689 1 A . scaffold8891 ScafM INDEL 0032.scaffold00124 140697 2 TA .. scaffold8891 Both INDEL 0032.scaffold00124 140792 1 . C scaffold8891 ReadM SNP 0032.scaffold00124 140871 1 G C - ReadM INDEL 0032.scaffold00124 140979 2 .. AG - Both SNP 0032.scaffold00124 141025 1 G A scaffold8891 Both SNP 0032.scaffold00124 141087 1 G T scaffold8891 Both SNP 0032.scaffold00124 141097 1 G A scaffold8891 Both SNP 0032.scaffold00124 141396 1 G A scaffold8891 Both INDEL 0032.scaffold00124 141421 2 AA .. scaffold8891 Both SNP 0032.scaffold00124 141497 1 G A scaffold8891 Both SNP 0032.scaffold00124 141902 1 A T scaffold8891 Both SNP 0032.scaffold00124 141993 1 T C scaffold8891 Both SNP 0032.scaffold00124 142077 1 C A scaffold8891 ScafM INDEL 0032.scaffold00124 142449 16 ................ TTTCTTTTTTCTAAAC scaffold8891 ScafM SNP 0032.scaffold00124 142476 1 T G scaffold8891 ScafM SNP 0032.scaffold00124 142613 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 142618 1 T A scaffold8891 ScafM INDEL 0032.scaffold00124 142633 2 AG .. scaffold8891 ScafM SNP 0032.scaffold00124 142718 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 142743 1 G A scaffold8891 Both INDEL 0032.scaffold00124 142978 1 . T scaffold8891 ScafM INDEL 0032.scaffold00124 143024 1 . T scaffold8891 ScafM SNP 0032.scaffold00124 143026 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 143084 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143102 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 143147 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 143161 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 143205 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 143211 1 T A scaffold8891 ScafM SNP 0032.scaffold00124 143240 1 T G scaffold8891 ScafM SNP 0032.scaffold00124 143320 1 G C scaffold8891 ScafM SNP 0032.scaffold00124 143327 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 143332 1 T G scaffold8891 ScafM SNP 0032.scaffold00124 143334 1 T A scaffold8891 Both SNP 0032.scaffold00124 143399 1 G A scaffold8891 Both INDEL 0032.scaffold00124 143405 1 . A scaffold8891 Both SNP 0032.scaffold00124 143437 1 A G scaffold8891 Both SNP 0032.scaffold00124 143533 1 G A scaffold8891 Both SNP 0032.scaffold00124 143601 1 A G scaffold8891 Both SNP 0032.scaffold00124 143604 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 143619 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 143636 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143645 2 CA GG scaffold8891 ScafM SNP 0032.scaffold00124 143683 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143685 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 143701 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143707 2 CG TA scaffold8891 ScafM SNP 0032.scaffold00124 143710 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 143712 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 143715 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 143726 1 T A scaffold8891 ScafM SNP 0032.scaffold00124 143728 1 T C scaffold8891 ScafM INDEL 0032.scaffold00124 143742 2 TT .C scaffold8891 ScafM INDEL 0032.scaffold00124 143745 1 . G scaffold8891 ScafM SNP 0032.scaffold00124 143760 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 143763 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 143767 1 T A scaffold8891 ScafM SNP 0032.scaffold00124 143779 2 GA AG scaffold8891 ScafM SNP 0032.scaffold00124 143782 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 143788 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143790 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 143796 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 143799 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 143803 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143808 1 A G scaffold8891 ScafM INDEL 0032.scaffold00124 143812 1 . C scaffold8891 ScafM SNP 0032.scaffold00124 143815 1 A C scaffold8891 ScafM SNP 0032.scaffold00124 143832 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 143842 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 143845 1 A C scaffold8891 ScafM SNP 0032.scaffold00124 143850 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 143854 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 144187 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 144191 2 TG CA scaffold8891 ScafM SNP 0032.scaffold00124 144195 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 144207 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 144217 1 C G scaffold8891 ScafM SNP 0032.scaffold00124 144231 2 GG AC scaffold8891 ScafM SNP 0032.scaffold00124 144240 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 146993 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 147013 2 GC CT scaffold8891 ScafM SNP 0032.scaffold00124 147040 1 C A scaffold8891 ScafM SNP 0032.scaffold00124 147054 2 CC TG scaffold8891 ScafM SNP 0032.scaffold00124 147083 1 T C scaffold8891 ScafM SNP 0032.scaffold00124 147088 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 147091 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 147121 1 C T scaffold8891 ScafM SNP 0032.scaffold00124 147123 1 G A scaffold8891 ScafM SNP 0032.scaffold00124 147125 2 TC CT scaffold8891 ScafM INDEL 0032.scaffold00124 147133 1 C . scaffold8891 ScafM SNP 0032.scaffold00124 147149 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 148162 1 T G scaffold8891 ScafM INDEL 0032.scaffold00124 148246 2 TT .. scaffold8891 ScafM SNP 0032.scaffold00124 148257 1 T A scaffold8891 ScafM INDEL 0032.scaffold00124 148259 1 . T scaffold8891 ScafM SNP 0032.scaffold00124 148283 1 G T scaffold8891 ScafM SNP 0032.scaffold00124 148316 1 A T scaffold8891 ScafM SNP 0032.scaffold00124 148390 1 A G scaffold8891 ScafM SNP 0032.scaffold00124 148398 1 T C scaffold8891 ScafM INDEL 0032.scaffold00124 162247 3 TTA ... scaffold6638 ScafM SNP 0032.scaffold00124 162343 2 GA AG scaffold6638 ScafM SNP 0032.scaffold00124 162352 1 A G scaffold6638 ScafM SNP 0032.scaffold00124 168064 1 C G scaffold6373 ScafM SNP 0032.scaffold00124 168097 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 168113 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 168121 1 G . scaffold6373 ScafM SNP 0032.scaffold00124 168128 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 168144 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 168156 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 168163 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 168186 1 A C scaffold6373 ScafM INDEL 0032.scaffold00124 168195 1 A . scaffold6373 ScafM SNP 0032.scaffold00124 168198 1 G T scaffold6373 ScafM INDEL 0032.scaffold00124 168239 6 TAACTT ...... scaffold6373 ScafM INDEL 0032.scaffold00124 168246 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 168262 1 G C scaffold6373 ScafM SNP 0032.scaffold00124 168277 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 168288 1 G C scaffold6373 ScafM SNP 0032.scaffold00124 168364 1 C A scaffold6373 ScafM SNP 0032.scaffold00124 168366 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 168369 3 GGT AAA scaffold6373 ScafM SNP 0032.scaffold00124 168389 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 168391 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 168402 2 TC AT scaffold6373 ScafM SNP 0032.scaffold00124 168409 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 168411 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 168417 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 168420 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 168438 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 168444 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 168449 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 168461 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 168473 2 AG CA scaffold6373 ScafM SNP 0032.scaffold00124 168571 1 A T scaffold6373 ScafM INDEL 0032.scaffold00124 168573 2 CG .. scaffold6373 ScafM SNP 0032.scaffold00124 168578 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 168615 1 G C scaffold6373 ScafM SNP 0032.scaffold00124 168626 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 168633 1 G T scaffold6373 ScafM SNP 0032.scaffold00124 168635 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 168638 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 168641 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 168645 1 A T scaffold6373 ScafM INDEL 0032.scaffold00124 168652 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 168665 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 168684 1 A G scaffold6373 ScafM INDEL 0032.scaffold00124 168698 1 . T scaffold6373 ScafM SNP 0032.scaffold00124 168708 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 168714 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 168728 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 169174 2 CC TT scaffold6373 ScafM SNP 0032.scaffold00124 169185 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 169187 1 . A scaffold6373 ScafM SNP 0032.scaffold00124 169206 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 169209 1 G A scaffold6373 ScafM INDEL 0032.scaffold00124 169228 12 TTTACCCAACAC ............ scaffold6373 ScafM SNP 0032.scaffold00124 169249 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 169258 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 169270 2 CA TC scaffold6373 ScafM INDEL 0032.scaffold00124 173595 1 A . scaffold48366 ScafM SNP 0032.scaffold00124 173601 1 C T scaffold48366 ScafM SNP 0032.scaffold00124 173610 1 G A scaffold48366 ScafM SNP 0032.scaffold00124 173612 1 A G scaffold48366 ScafM SNP 0032.scaffold00124 173620 1 T C scaffold48366 ScafM SNP 0032.scaffold00124 173634 1 C T scaffold48366 ScafM SNP 0032.scaffold00124 173651 1 T C scaffold48366 ScafM SNP 0032.scaffold00124 173653 1 G A scaffold48366 ScafM SNP 0032.scaffold00124 173679 1 G A scaffold48366 ScafM SNP 0032.scaffold00124 173697 3 TGT AAA scaffold48366 ScafM SNP 0032.scaffold00124 173731 1 G A scaffold48366 ScafM SNP 0032.scaffold00124 173753 1 A G scaffold48366 ScafM SNP 0032.scaffold00124 173756 1 A G scaffold48366 ScafM INDEL 0032.scaffold00124 173764 2 .. AA scaffold48366 ScafM INDEL 0032.scaffold00124 173783 2 .. TC scaffold48366 ScafM SNP 0032.scaffold00124 173788 1 A T scaffold48366 ScafM INDEL 0032.scaffold00124 173789 2 .. GT scaffold48366 ScafM SNP 0032.scaffold00124 173790 1 C A scaffold48366 ScafM SNP 0032.scaffold00124 173792 1 G A scaffold48366 ScafM SNP 0032.scaffold00124 173796 2 CA TT scaffold48366 ScafM INDEL 0032.scaffold00124 173798 4 .... GTTT scaffold48366 ScafM SNP 0032.scaffold00124 173799 1 C T scaffold48366 ScafM INDEL 0032.scaffold00124 173804 2 .. AT scaffold48366 ScafM SNP 0032.scaffold00124 173855 1 A G scaffold48366 ScafM SNP 0032.scaffold00124 173860 1 C T scaffold48366 ScafM INDEL 0032.scaffold00124 173867 1 . T scaffold48366 ScafM SNP 0032.scaffold00124 173870 1 T A scaffold48366 ScafM INDEL 0032.scaffold00124 173872 1 C . scaffold48366 ScafM SNP 0032.scaffold00124 173875 1 C A scaffold48366 ScafM INDEL 0032.scaffold00124 173886 1 . A scaffold48366 ScafM SNP 0032.scaffold00124 173892 1 T A scaffold48366 ScafM INDEL 0032.scaffold00124 173897 1 . C scaffold48366 ScafM INDEL 0032.scaffold00124 173904 1 T . scaffold48366 ScafM SNP 0032.scaffold00124 173916 1 C T scaffold48366 ScafM SNP 0032.scaffold00124 173921 2 AG GA scaffold48366 ScafM SNP 0032.scaffold00124 173930 2 TA AT scaffold48366 ScafM SNP 0032.scaffold00124 173938 1 C T scaffold48366 ScafM SNP 0032.scaffold00124 173944 1 T C scaffold48366 ScafM SNP 0032.scaffold00124 173953 1 T C scaffold48366 ScafM SNP 0032.scaffold00124 174481 1 T C scaffold6373 ScafM INDEL 0032.scaffold00124 174505 12 CTACACAAGTAC ............ scaffold6373 ScafM INDEL 0032.scaffold00124 174519 3 AAG ... scaffold6373 ScafM SNP 0032.scaffold00124 174531 1 C G scaffold6373 ScafM SNP 0032.scaffold00124 174535 1 A G scaffold6373 ScafM INDEL 0032.scaffold00124 174541 1 . T scaffold6373 ScafM INDEL 0032.scaffold00124 174547 1 . G scaffold6373 ScafM SNP 0032.scaffold00124 174554 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 174577 6 ...... AGACTA scaffold6373 ScafM INDEL 0032.scaffold00124 174578 1 . A scaffold6373 ScafM SNP 0032.scaffold00124 174599 2 GC AA scaffold6373 ScafM SNP 0032.scaffold00124 174713 1 G C scaffold6373 ScafM INDEL 0032.scaffold00124 174797 1 . T scaffold6373 ScafM SNP 0032.scaffold00124 174820 1 A T scaffold6373 Both SNP 0032.scaffold00124 174995 1 C A scaffold6373 Both SNP 0032.scaffold00124 175011 1 T G scaffold6373 Both SNP 0032.scaffold00124 175127 1 G T scaffold6373 ScafM INDEL 0032.scaffold00124 175247 7 TTGTGAT ....... scaffold6373 Both SNP 0032.scaffold00124 175292 1 C T scaffold6373 Both SNP 0032.scaffold00124 175320 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 175356 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 175367 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 175372 1 G A scaffold6373 Both SNP 0032.scaffold00124 175389 1 T A scaffold6373 Both SNP 0032.scaffold00124 175413 1 C T scaffold6373 ReadM SNP 0032.scaffold00124 175626 1 C G - ReadM SNP 0032.scaffold00124 175628 1 C T - Both SNP 0032.scaffold00124 175707 1 G A scaffold6373 ReadM SNP 0032.scaffold00124 175744 1 T G - ScafM SNP 0032.scaffold00124 175787 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 175804 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 175809 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 175812 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 175816 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 175829 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 175841 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 175848 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 175864 1 C A scaffold6373 ScafM SNP 0032.scaffold00124 175876 2 CA TG scaffold6373 ScafM SNP 0032.scaffold00124 175904 1 G T scaffold6373 ScafM SNP 0032.scaffold00124 175908 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 176114 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 176133 1 T G scaffold6373 Both SNP 0032.scaffold00124 176178 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 176265 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 176285 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 176309 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 176765 2 TA AC scaffold6373 ScafM SNP 0032.scaffold00124 176768 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 176776 2 GC TA scaffold6373 ScafM SNP 0032.scaffold00124 176779 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 176808 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 176816 2 TT .. scaffold6373 ScafM SNP 0032.scaffold00124 176826 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 176854 2 GT AA scaffold6373 ScafM INDEL 0032.scaffold00124 176858 1 G . scaffold6373 ScafM SNP 0032.scaffold00124 176899 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 176925 1 G T scaffold6373 ScafM SNP 0032.scaffold00124 176934 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 176952 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 176960 1 C G scaffold6373 ScafM SNP 0032.scaffold00124 176964 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 177009 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 177061 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 177082 46 .............................................. AATTTCTGGATGCTTCCTTTATCAATTTTTCTAGATGGATTTTCTG scaffold6373 ScafM INDEL 0032.scaffold00124 177084 2 .. CC scaffold6373 ScafM INDEL 0032.scaffold00124 177173 2 TC .. scaffold6373 ScafM SNP 0032.scaffold00124 177180 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 177209 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 177231 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 177233 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 177274 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 177302 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 177305 7 TTGTTTT ....... scaffold6373 ScafM SNP 0032.scaffold00124 177323 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 177329 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 177348 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 177361 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 177369 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 177374 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 177377 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 177415 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 177434 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 177436 1 C G scaffold6373 Both SNP 0032.scaffold00124 177452 1 G T scaffold6373 Both SNP 0032.scaffold00124 177488 1 C T scaffold6373 Both SNP 0032.scaffold00124 177499 1 G A scaffold6373 Both SNP 0032.scaffold00124 177619 1 C T scaffold6373 Both SNP 0032.scaffold00124 177637 1 A G scaffold6373 Both SNP 0032.scaffold00124 177737 1 G A scaffold6373 Both SNP 0032.scaffold00124 177816 1 T C scaffold6373 Both SNP 0032.scaffold00124 177827 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 177867 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 177873 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 177893 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 177906 7 TCTTGAA ....... scaffold6373 ScafM SNP 0032.scaffold00124 177928 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 177951 1 T C scaffold6373 ScafM INDEL 0032.scaffold00124 177969 3 AAA ... scaffold6373 Both INDEL 0032.scaffold00124 178022 1 C . scaffold6373 Both INDEL 0032.scaffold00124 178091 1 . T scaffold6373 Both SNP 0032.scaffold00124 178165 1 A G scaffold6373 Both SNP 0032.scaffold00124 178253 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 178285 2 TG CA scaffold6373 Both SNP 0032.scaffold00124 178302 1 G T scaffold6373 Both SNP 0032.scaffold00124 178312 1 A G scaffold6373 Both SNP 0032.scaffold00124 178356 1 A C scaffold6373 Both SNP 0032.scaffold00124 178470 1 T C scaffold6373 Both SNP 0032.scaffold00124 178501 1 T A scaffold6373 Both SNP 0032.scaffold00124 178505 1 C T scaffold6373 Both SNP 0032.scaffold00124 178600 1 C T scaffold6373 Both SNP 0032.scaffold00124 178728 1 A G scaffold6373 Both SNP 0032.scaffold00124 178755 1 A G scaffold6373 Both INDEL 0032.scaffold00124 178807 1 C . scaffold6373 ScafM INDEL 0032.scaffold00124 178831 24 ........................ TGGTGTCAATCCTGTAAAGATATT scaffold6373 ScafM SNP 0032.scaffold00124 178857 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 178884 1 C T scaffold6373 Both SNP 0032.scaffold00124 178920 1 C T scaffold6373 Both INDEL 0032.scaffold00124 178926 1 C . scaffold6373 ScafM SNP 0032.scaffold00124 178929 1 T G scaffold6373 Both SNP 0032.scaffold00124 179041 1 A T scaffold6373 Both SNP 0032.scaffold00124 179071 1 G A scaffold6373 Both SNP 0032.scaffold00124 179111 1 G A scaffold6373 Both SNP 0032.scaffold00124 179203 1 G A scaffold6373 Both SNP 0032.scaffold00124 179226 1 T C scaffold6373 Both SNP 0032.scaffold00124 179245 1 G T scaffold6373 ScafM INDEL 0032.scaffold00124 179278 7 AATGCTT ....... scaffold6373 ScafM SNP 0032.scaffold00124 179297 1 A G scaffold6373 Both SNP 0032.scaffold00124 179309 1 G T scaffold6373 Both SNP 0032.scaffold00124 179380 1 T C scaffold6373 Both SNP 0032.scaffold00124 179408 1 C T scaffold6373 Both SNP 0032.scaffold00124 179513 1 C A scaffold6373 Both SNP 0032.scaffold00124 179517 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 179548 3 ... TGT scaffold6373 Both SNP 0032.scaffold00124 179571 1 C G scaffold6373 Both SNP 0032.scaffold00124 179600 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 179631 1 C T scaffold6373 Both INDEL 0032.scaffold00124 179729 1 . C scaffold6373 Both SNP 0032.scaffold00124 179731 1 A C scaffold6373 Both SNP 0032.scaffold00124 179764 1 C A scaffold6373 Both SNP 0032.scaffold00124 179996 1 T A scaffold6373 Both SNP 0032.scaffold00124 180176 1 T G scaffold6373 Both SNP 0032.scaffold00124 180521 1 C T scaffold6373 Both SNP 0032.scaffold00124 180583 1 C A scaffold6373 ScafM INDEL 0032.scaffold00124 180588 1 . A scaffold6373 ScafM SNP 0032.scaffold00124 180596 1 T A scaffold6373 Both SNP 0032.scaffold00124 180605 1 T C scaffold6373 Both SNP 0032.scaffold00124 180640 1 G T scaffold6373 Both SNP 0032.scaffold00124 180857 1 C T scaffold6373 ReadM SNP 0032.scaffold00124 180974 1 C A - ReadM SNP 0032.scaffold00124 180988 1 A G - ReadM INDEL 0032.scaffold00124 181091 1 . T - ReadM SNP 0032.scaffold00124 181122 1 T C - ReadM SNP 0032.scaffold00124 181294 1 A G - ReadM SNP 0032.scaffold00124 182976 1 C T - ReadM SNP 0032.scaffold00124 183181 1 G A - ReadM SNP 0032.scaffold00124 183204 1 G A - ReadM SNP 0032.scaffold00124 183207 1 T A - ReadM INDEL 0032.scaffold00124 183295 1 C . - ScafM SNP 0032.scaffold00124 184518 1 T C scaffold6373 Both SNP 0032.scaffold00124 184780 1 A T scaffold6373 Both SNP 0032.scaffold00124 184942 1 A G scaffold6373 Both SNP 0032.scaffold00124 185035 1 C A scaffold6373 Both SNP 0032.scaffold00124 185133 1 C T scaffold6373 Both SNP 0032.scaffold00124 185419 1 C G scaffold6373 ScafM INDEL 0032.scaffold00124 185618 4 TGTT .... scaffold6373 ScafM INDEL 0032.scaffold00124 185625 1 G . scaffold6373 ScafM SNP 0032.scaffold00124 185629 1 G C scaffold6373 ScafM INDEL 0032.scaffold00124 185635 2 .. TA scaffold6373 ScafM INDEL 0032.scaffold00124 185638 1 . C scaffold6373 ScafM SNP 0032.scaffold00124 185651 2 TT AG scaffold6373 ScafM INDEL 0032.scaffold00124 185669 2 AG .C scaffold6373 ScafM INDEL 0032.scaffold00124 185714 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 185719 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 185722 1 G C scaffold6373 ScafM SNP 0032.scaffold00124 185745 1 C A scaffold6373 ScafM INDEL 0032.scaffold00124 186313 4 TAAT .... scaffold6373 ScafM SNP 0032.scaffold00124 186347 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 186387 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 186406 1 A T scaffold6373 ScafM SNP 0032.scaffold00124 186416 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 186429 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 186433 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 186472 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 186474 1 G A scaffold6373 ScafM INDEL 0032.scaffold00124 186475 2 .. AA scaffold6373 ScafM SNP 0032.scaffold00124 186483 1 T G scaffold6373 ScafM SNP 0032.scaffold00124 186494 1 A C scaffold6373 ScafM INDEL 0032.scaffold00124 186511 9 ......... CAAAAATTT scaffold6373 ScafM INDEL 0032.scaffold00124 186597 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 186685 1 C G scaffold6373 ScafM SNP 0032.scaffold00124 186739 2 CT TC scaffold6373 ScafM SNP 0032.scaffold00124 186805 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 186828 2 .. TT scaffold6373 ScafM INDEL 0032.scaffold00124 186831 1 . A scaffold6373 ScafM INDEL 0032.scaffold00124 186843 7 GGGTGCA ....... scaffold6373 ScafM SNP 0032.scaffold00124 187389 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 187443 1 G T scaffold6373 ScafM SNP 0032.scaffold00124 187447 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 187476 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 187497 1 G T scaffold6373 ScafM SNP 0032.scaffold00124 187503 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 187552 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 187556 1 A G scaffold6373 ScafM INDEL 0032.scaffold00124 187875 1 A . scaffold18909 ScafM SNP 0032.scaffold00124 187899 2 TC AT scaffold18909 ScafM SNP 0032.scaffold00124 187919 2 CC GT scaffold18909 ScafM SNP 0032.scaffold00124 187922 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 187932 2 AT TC scaffold18909 ScafM SNP 0032.scaffold00124 187961 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 187967 1 C G scaffold18909 ScafM SNP 0032.scaffold00124 187971 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 187994 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188008 2 GC AT scaffold18909 ScafM SNP 0032.scaffold00124 188012 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188015 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188018 2 AT TC scaffold18909 ScafM SNP 0032.scaffold00124 188024 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188033 2 CC AT scaffold18909 ScafM SNP 0032.scaffold00124 188043 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188045 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188049 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188051 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188054 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188057 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188060 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188065 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188072 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188084 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188086 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188088 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188094 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188103 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 188108 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188114 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188118 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188129 2 GA CC scaffold18909 ScafM SNP 0032.scaffold00124 188135 2 AC GA scaffold18909 ScafM SNP 0032.scaffold00124 188140 3 ACA GAG scaffold18909 ScafM SNP 0032.scaffold00124 188145 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188149 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188153 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188155 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188160 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188165 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188180 2 AT TC scaffold18909 ScafM SNP 0032.scaffold00124 188183 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188189 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188191 2 GA AT scaffold18909 ScafM SNP 0032.scaffold00124 188201 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188207 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188210 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188379 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188383 2 GG AC scaffold18909 ScafM SNP 0032.scaffold00124 188398 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188401 3 TTG CCA scaffold18909 ScafM SNP 0032.scaffold00124 188413 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188419 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188424 1 G T scaffold18909 ScafM SNP 0032.scaffold00124 188426 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188434 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188444 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 188449 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188452 2 GA AG scaffold18909 ScafM SNP 0032.scaffold00124 188456 1 T G scaffold18909 ScafM SNP 0032.scaffold00124 188460 1 C A scaffold18909 ScafM INDEL 0032.scaffold00124 188470 3 CAT ... scaffold18909 ScafM INDEL 0032.scaffold00124 188474 1 G . scaffold18909 ScafM SNP 0032.scaffold00124 188476 2 TT CC scaffold18909 ScafM SNP 0032.scaffold00124 188479 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188483 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188485 1 C G scaffold18909 ScafM SNP 0032.scaffold00124 188492 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188498 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188502 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188507 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188510 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188520 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188525 1 T G scaffold18909 ScafM SNP 0032.scaffold00124 188531 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188534 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188546 4 TGGT AAAC scaffold18909 ScafM SNP 0032.scaffold00124 188552 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188558 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188564 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188579 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188581 1 C G scaffold18909 ScafM SNP 0032.scaffold00124 188588 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188592 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188597 2 AC TT scaffold18909 ScafM INDEL 0032.scaffold00124 188610 1 . A scaffold18909 ScafM SNP 0032.scaffold00124 188612 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188617 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188620 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188629 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188638 2 AA TG scaffold18909 ScafM SNP 0032.scaffold00124 188644 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188665 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188675 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188677 1 G T scaffold18909 ScafM SNP 0032.scaffold00124 188680 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188683 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188686 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 188695 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188698 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188701 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188707 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188710 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188729 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188737 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188764 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188767 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188776 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188782 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188786 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188803 2 AA GG scaffold18909 ScafM SNP 0032.scaffold00124 188806 1 T C scaffold18909 ScafM INDEL 0032.scaffold00124 188809 1 A . scaffold18909 ScafM SNP 0032.scaffold00124 188819 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188825 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188834 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 188840 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188842 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188846 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188849 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188853 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188857 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 188864 1 A C scaffold18909 ScafM SNP 0032.scaffold00124 188873 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188876 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 188879 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 188882 2 TC GT scaffold18909 ScafM SNP 0032.scaffold00124 188891 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188897 2 TG CT scaffold18909 ScafM SNP 0032.scaffold00124 188903 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188921 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188936 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 188948 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 188969 1 T G scaffold18909 ScafM INDEL 0032.scaffold00124 188994 1 G . scaffold18909 ScafM SNP 0032.scaffold00124 188996 1 C T scaffold18909 ScafM INDEL 0032.scaffold00124 188998 1 . A scaffold18909 ScafM SNP 0032.scaffold00124 189002 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189011 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189014 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189017 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189023 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 189026 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 189032 1 A T scaffold18909 ScafM INDEL 0032.scaffold00124 189038 5 GGGTC ...AA scaffold18909 ScafM INDEL 0032.scaffold00124 189046 3 GTG ... scaffold18909 ScafM INDEL 0032.scaffold00124 189050 3 CCA ... scaffold18909 ScafM SNP 0032.scaffold00124 189056 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 189059 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 189064 2 AG GT scaffold18909 ScafM SNP 0032.scaffold00124 189068 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 189071 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 189080 1 T G scaffold18909 ScafM SNP 0032.scaffold00124 189086 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 189089 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 189092 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189094 2 CT AG scaffold18909 ScafM SNP 0032.scaffold00124 189101 3 CTT AGA scaffold18909 ScafM INDEL 0032.scaffold00124 189108 1 . A scaffold18909 ScafM SNP 0032.scaffold00124 189111 1 A C scaffold18909 ScafM INDEL 0032.scaffold00124 189113 1 C . scaffold18909 ScafM SNP 0032.scaffold00124 189119 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189126 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 189137 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189139 2 AC CT scaffold18909 ScafM SNP 0032.scaffold00124 189143 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189149 2 CG AA scaffold18909 ScafM SNP 0032.scaffold00124 189156 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189176 1 G A scaffold18909 ScafM SNP 0032.scaffold00124 189181 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 189203 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189209 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189219 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 189221 2 CT AG scaffold18909 ScafM SNP 0032.scaffold00124 189224 1 T A scaffold18909 ScafM SNP 0032.scaffold00124 189226 1 A T scaffold18909 ScafM SNP 0032.scaffold00124 189228 1 A G scaffold18909 ScafM SNP 0032.scaffold00124 189230 1 C A scaffold18909 ScafM SNP 0032.scaffold00124 189241 3 ACT TTA scaffold18909 ScafM SNP 0032.scaffold00124 189245 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189247 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189251 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189256 2 GT AG scaffold18909 ScafM SNP 0032.scaffold00124 189266 1 C T scaffold18909 ScafM SNP 0032.scaffold00124 189275 1 T C scaffold18909 ScafM SNP 0032.scaffold00124 189291 1 C G scaffold18909 ScafM SNP 0032.scaffold00124 189293 1 T G scaffold18909 ScafM SNP 0032.scaffold00124 189297 2 TA CC scaffold18909 ScafM SNP 0032.scaffold00124 195248 1 C T scaffold20115 ScafM SNP 0032.scaffold00124 195263 1 A G scaffold20115 ScafM SNP 0032.scaffold00124 195292 1 T C scaffold20115 ScafM INDEL 0032.scaffold00124 195303 2 .. AG scaffold20115 ScafM INDEL 0032.scaffold00124 195305 1 . G scaffold20115 ScafM SNP 0032.scaffold00124 195314 1 T G scaffold20115 ScafM SNP 0032.scaffold00124 195318 1 G T scaffold20115 ScafM SNP 0032.scaffold00124 195329 1 A G scaffold20115 ScafM SNP 0032.scaffold00124 195337 2 AA GG scaffold20115 ScafM SNP 0032.scaffold00124 195367 1 A G scaffold20115 ScafM SNP 0032.scaffold00124 198608 1 A G scaffold3075 ScafM SNP 0032.scaffold00124 198772 1 C T scaffold3075 ScafM SNP 0032.scaffold00124 198807 1 A G scaffold3075 ScafM SNP 0032.scaffold00124 198836 3 AAG CGT scaffold3075 ScafM SNP 0032.scaffold00124 198844 1 G T scaffold3075 ScafM INDEL 0032.scaffold00124 198872 5 ..... AAGTA scaffold3075 ScafM SNP 0032.scaffold00124 198892 1 T A scaffold3075 ScafM SNP 0032.scaffold00124 198920 1 A C scaffold3075 ScafM SNP 0032.scaffold00124 198949 1 G A scaffold3075 ScafM SNP 0032.scaffold00124 198970 1 A T scaffold3075 ScafM SNP 0032.scaffold00124 199885 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 199949 1 T G scaffold6373 ScafM INDEL 0032.scaffold00124 199964 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 199999 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 200002 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 205594 1 G C scaffold6373 ScafM INDEL 0032.scaffold00124 205780 2 AA .. scaffold6373 ScafM SNP 0032.scaffold00124 205813 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 207984 1 T C scaffold6373 ReadM SNP 0032.scaffold00124 209369 1 A G - ReadM SNP 0032.scaffold00124 209674 1 C T - ReadM SNP 0032.scaffold00124 209707 1 C A - ReadM SNP 0032.scaffold00124 209742 1 C T - ReadM SNP 0032.scaffold00124 209762 1 G C - ReadM SNP 0032.scaffold00124 209812 1 T C - ReadM INDEL 0032.scaffold00124 209814 2 AG .. - ReadM SNP 0032.scaffold00124 210153 1 C T - ReadM SNP 0032.scaffold00124 210178 1 C G - ReadM SNP 0032.scaffold00124 210188 1 A G - ReadM INDEL 0032.scaffold00124 210370 1 T . - ReadM SNP 0032.scaffold00124 210941 1 G C - ReadM INDEL 0032.scaffold00124 211097 1 A . - ReadM SNP 0032.scaffold00124 211114 1 T C - Both SNP 0032.scaffold00124 211294 1 G A scaffold6373 ReadM SNP 0032.scaffold00124 211500 1 G T - ReadM SNP 0032.scaffold00124 211558 1 A G - Both SNP 0032.scaffold00124 211782 1 T C scaffold6373 Both SNP 0032.scaffold00124 211794 1 A G scaffold6373 Both SNP 0032.scaffold00124 211930 1 G C scaffold6373 ReadM INDEL 0032.scaffold00124 212218 1 A . - ReadM SNP 0032.scaffold00124 212311 1 C T - ScafM SNP 0032.scaffold00124 212384 1 A T scaffold6373 ScafM INDEL 0032.scaffold00124 212393 4 .... GAAA scaffold6373 ScafM SNP 0032.scaffold00124 212414 2 GG TA scaffold6373 Both SNP 0032.scaffold00124 212441 1 C T scaffold6373 Both SNP 0032.scaffold00124 212448 1 A G scaffold6373 ReadM INDEL 0032.scaffold00124 212514 1 . A - Both SNP 0032.scaffold00124 212613 1 C T scaffold6373 Both SNP 0032.scaffold00124 212677 1 G T scaffold6373 Both SNP 0032.scaffold00124 212733 1 C T scaffold6373 ScafM INDEL 0032.scaffold00124 212972 28 CAACTGACACCAAAAATGGCTTGACTAA ............................ scaffold6373 ScafM INDEL 0032.scaffold00124 213002 3 ATA ... scaffold6373 ScafM INDEL 0032.scaffold00124 213007 1 T . scaffold6373 ScafM SNP 0032.scaffold00124 213021 1 G A scaffold6373 Both INDEL 0032.scaffold00124 213072 1 T . scaffold6373 Both SNP 0032.scaffold00124 213083 1 T C scaffold6373 Both SNP 0032.scaffold00124 213113 1 G C scaffold6373 Both SNP 0032.scaffold00124 213302 1 A T scaffold6373 Both SNP 0032.scaffold00124 213354 1 T C scaffold6373 Both SNP 0032.scaffold00124 213494 1 T C scaffold6373 Both SNP 0032.scaffold00124 213508 1 T A scaffold6373 Both SNP 0032.scaffold00124 213567 1 C T scaffold6373 Both INDEL 0032.scaffold00124 213594 1 C . scaffold6373 Both INDEL 0032.scaffold00124 213748 1 . T scaffold6373 Both SNP 0032.scaffold00124 213795 1 G A scaffold6373 Both SNP 0032.scaffold00124 213986 1 C T scaffold6373 Both SNP 0032.scaffold00124 213999 1 C A scaffold6373 Both SNP 0032.scaffold00124 214373 1 A G scaffold6373 Both SNP 0032.scaffold00124 214478 1 A G scaffold6373 Both SNP 0032.scaffold00124 214502 1 C T scaffold6373 ReadM SNP 0032.scaffold00124 214733 1 G C - Both SNP 0032.scaffold00124 214870 1 T C scaffold6373 Both SNP 0032.scaffold00124 215047 1 T A scaffold6373 Both SNP 0032.scaffold00124 215052 1 T A scaffold6373 Both SNP 0032.scaffold00124 215289 1 G A scaffold6373 Both SNP 0032.scaffold00124 215330 1 T C scaffold6373 Both SNP 0032.scaffold00124 216746 1 G A scaffold6373 Both SNP 0032.scaffold00124 217736 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 217833 2 CC TT scaffold6373 Both SNP 0032.scaffold00124 218018 1 G A scaffold6373 Both SNP 0032.scaffold00124 218589 1 G C scaffold6373 Both SNP 0032.scaffold00124 218690 1 C T scaffold6373 Both SNP 0032.scaffold00124 218724 1 G C scaffold6373 Both INDEL 0032.scaffold00124 218916 1 T . scaffold6373 Both SNP 0032.scaffold00124 219018 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 219240 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 219651 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 219667 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 219690 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 219817 1 A G scaffold6373 Both SNP 0032.scaffold00124 220445 1 G C scaffold6373 ScafM INDEL 0032.scaffold00124 220737 2 .. TC scaffold6373 Both SNP 0032.scaffold00124 220852 1 C G scaffold6373 Both SNP 0032.scaffold00124 220972 1 G A scaffold6373 ReadM INDEL 0032.scaffold00124 220980 1 A . - Both SNP 0032.scaffold00124 221400 1 C T scaffold6373 Both SNP 0032.scaffold00124 221458 1 C T scaffold6373 Both SNP 0032.scaffold00124 221602 1 G T scaffold6373 Both INDEL 0032.scaffold00124 221671 1 . T scaffold6373 Both SNP 0032.scaffold00124 221900 1 C T scaffold6373 Both SNP 0032.scaffold00124 221933 1 T C scaffold6373 Both SNP 0032.scaffold00124 222077 1 A G scaffold6373 Both SNP 0032.scaffold00124 222409 1 T A scaffold6373 ScafM INDEL 0032.scaffold00124 222538 1 A . scaffold6373 Both SNP 0032.scaffold00124 223381 1 T C scaffold6373 Both SNP 0032.scaffold00124 223918 1 C G scaffold6373 Both SNP 0032.scaffold00124 224270 1 T C scaffold6373 Both INDEL 0032.scaffold00124 224325 2 AA .. scaffold6373 ScafM SNP 0032.scaffold00124 224344 1 A C scaffold6373 ScafM SNP 0032.scaffold00124 224537 1 T C scaffold6373 ScafM SNP 0032.scaffold00124 224549 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 224558 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 224576 1 T A scaffold6373 ScafM SNP 0032.scaffold00124 224587 1 G A scaffold6373 ScafM SNP 0032.scaffold00124 224606 2 AT TC scaffold6373 ScafM SNP 0032.scaffold00124 224609 1 G A scaffold6373 Both SNP 0032.scaffold00124 224648 1 G A scaffold6373 Both SNP 0032.scaffold00124 224685 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 224754 2 GC AG scaffold6373 ScafM SNP 0032.scaffold00124 224781 1 A G scaffold6373 Both SNP 0032.scaffold00124 225125 1 G A scaffold6373 Both SNP 0032.scaffold00124 225138 1 C T scaffold6373 ScafM SNP 0032.scaffold00124 225144 1 A G scaffold6373 ScafM SNP 0032.scaffold00124 225195 1 T C scaffold6373 ScafM INDEL 0032.scaffold00124 226454 2 .. TT scaffold69 ScafM SNP 0032.scaffold00124 226458 1 G A scaffold69 ScafM SNP 0032.scaffold00124 226466 1 T A scaffold69 ScafM SNP 0032.scaffold00124 226744 1 A G scaffold69 ScafM SNP 0032.scaffold00124 226844 1 C G scaffold69 Both SNP 0032.scaffold00124 226926 1 A C scaffold69 Both SNP 0032.scaffold00124 226944 1 C T scaffold69 ReadM SNP 0032.scaffold00124 226977 1 C G - ReadM SNP 0032.scaffold00124 227011 1 T G - ScafM SNP 0032.scaffold00124 227310 1 A C scaffold69 Both SNP 0032.scaffold00124 227385 1 T C scaffold69 Both INDEL 0032.scaffold00124 228181 2 .. AT scaffold69 Both SNP 0032.scaffold00124 228257 1 A G scaffold69 ScafM INDEL 0032.scaffold00124 228351 35 ................................... CACAATTTTTAAGGCTTGGTAAACGAATCTTAAGC scaffold69 Both SNP 0032.scaffold00124 228392 1 G C scaffold69 Both SNP 0032.scaffold00124 228464 1 A G scaffold69 Both SNP 0032.scaffold00124 228563 1 A T scaffold69 Both SNP 0032.scaffold00124 228808 1 G T scaffold69 Both SNP 0032.scaffold00124 228814 1 G A scaffold69 Both INDEL 0032.scaffold00124 228824 2 .. AG scaffold69 Both INDEL 0032.scaffold00124 228915 2 GA .. scaffold69 Both SNP 0032.scaffold00124 229003 1 G A scaffold69 Both SNP 0032.scaffold00124 229109 1 A G scaffold69 Both SNP 0032.scaffold00124 229454 1 A G scaffold69 Both SNP 0032.scaffold00124 229535 1 T C scaffold69 Both SNP 0032.scaffold00124 229613 1 G T scaffold69 Both INDEL 0032.scaffold00124 229687 1 . T scaffold69 Both SNP 0032.scaffold00124 229707 1 A G scaffold69 Both SNP 0032.scaffold00124 229808 1 T C scaffold69 ReadM SNP 0032.scaffold00124 230025 1 C A - Both SNP 0032.scaffold00124 230358 1 T C scaffold69 Both SNP 0032.scaffold00124 230407 1 T C scaffold69 ScafM SNP 0032.scaffold00124 230494 1 G A scaffold69 ScafM INDEL 0032.scaffold00124 230548 3 ... AAT scaffold69 ScafM SNP 0032.scaffold00124 230555 1 C G scaffold69 Both SNP 0032.scaffold00124 230568 1 A G scaffold69 ScafM SNP 0032.scaffold00124 230596 1 T G scaffold69 Both INDEL 0032.scaffold00124 230653 1 G . scaffold69 Both SNP 0032.scaffold00124 230772 1 A G scaffold69 Both SNP 0032.scaffold00124 230996 1 T G scaffold69 Both SNP 0032.scaffold00124 230998 1 A G scaffold69 ScafM SNP 0032.scaffold00124 231031 1 T G scaffold69 Both SNP 0032.scaffold00124 231066 1 A G scaffold69 ScafM SNP 0032.scaffold00124 231324 1 A T scaffold69 ScafM SNP 0032.scaffold00124 231349 1 G A scaffold69 ScafM SNP 0032.scaffold00124 231366 1 T C scaffold69 ScafM SNP 0032.scaffold00124 231401 1 G A scaffold69 ScafM SNP 0032.scaffold00124 231566 1 A G scaffold69 ScafM SNP 0032.scaffold00124 231635 1 T A scaffold69 ReadM SNP 0032.scaffold00124 232342 1 T C - ReadM INDEL 0032.scaffold00124 232556 1 T . - ReadM SNP 0032.scaffold00124 232727 1 T C - ReadM INDEL 0032.scaffold00124 232747 1 . A - ReadM SNP 0032.scaffold00124 233038 1 A G - Both SNP 0032.scaffold00124 233161 1 A C scaffold69 Both SNP 0032.scaffold00124 233295 1 G A scaffold69 Both SNP 0032.scaffold00124 233577 1 G C scaffold69 Both SNP 0032.scaffold00124 233777 1 T A scaffold69 ScafM SNP 0032.scaffold00124 234751 2 CT AA scaffold69 Both SNP 0032.scaffold00124 234878 1 C G scaffold69 Both SNP 0032.scaffold00124 235283 1 A G scaffold69 Both SNP 0032.scaffold00124 235420 1 G A scaffold69 Both SNP 0032.scaffold00124 235436 1 T C scaffold69 Both INDEL 0032.scaffold00124 235461 2 .. TA scaffold69 Both SNP 0032.scaffold00124 235771 1 A T scaffold69 Both SNP 0032.scaffold00124 235773 1 A C scaffold69 ScafM SNP 0032.scaffold00124 235806 1 A G scaffold69 ScafM SNP 0032.scaffold00124 235809 1 C T scaffold69 ScafM SNP 0032.scaffold00124 235811 1 A G scaffold69 ScafM SNP 0032.scaffold00124 235831 1 G A scaffold69 ScafM SNP 0032.scaffold00124 235851 1 C T scaffold69 ScafM SNP 0032.scaffold00124 235885 1 G A scaffold69 ScafM SNP 0032.scaffold00124 235889 1 A T scaffold69 ScafM SNP 0032.scaffold00124 235899 1 A C scaffold69 ScafM SNP 0032.scaffold00124 235934 1 A G scaffold69 ScafM SNP 0032.scaffold00124 235942 1 T C scaffold69 ScafM SNP 0032.scaffold00124 235953 1 A G scaffold69 ScafM SNP 0032.scaffold00124 235972 1 G A scaffold69 ScafM SNP 0032.scaffold00124 235984 1 T C scaffold69 ScafM SNP 0032.scaffold00124 235996 1 C T scaffold69 ScafM SNP 0032.scaffold00124 236042 1 A G scaffold69 ScafM SNP 0032.scaffold00124 236045 1 G A scaffold69 ScafM SNP 0032.scaffold00124 236058 1 G A scaffold69 ScafM SNP 0032.scaffold00124 236078 1 A T scaffold69 ScafM SNP 0032.scaffold00124 236105 1 T C scaffold69 ScafM SNP 0032.scaffold00124 236149 1 G A scaffold69 ScafM SNP 0032.scaffold00124 236167 1 C T scaffold69 ScafM SNP 0032.scaffold00124 236362 1 T C scaffold69 ScafM SNP 0032.scaffold00124 236402 1 A C scaffold69 ScafM INDEL 0032.scaffold00124 236826 3 .TT GGA scaffold69 ScafM INDEL 0032.scaffold00124 236857 1 . G scaffold69 ScafM SNP 0032.scaffold00124 236859 1 T G scaffold69 ScafM SNP 0032.scaffold00124 236901 1 C G scaffold69 ScafM SNP 0032.scaffold00124 237004 1 C G scaffold69 ScafM SNP 0032.scaffold00124 237052 1 T A scaffold69 ScafM SNP 0032.scaffold00124 237143 1 G A scaffold69 ScafM SNP 0032.scaffold00124 237158 1 T C scaffold69 ScafM INDEL 0032.scaffold00124 237169 1 T . scaffold69 ScafM INDEL 0032.scaffold00124 237219 2 .. TT scaffold69 ScafM INDEL 0032.scaffold00124 237251 1 G . scaffold69 Both INDEL 0032.scaffold00124 237459 1 . A scaffold69 ScafM SNP 0032.scaffold00124 237467 1 T A scaffold69 ScafM SNP 0032.scaffold00124 237493 1 T G scaffold69 ScafM SNP 0032.scaffold00124 237498 1 C T scaffold69 ScafM SNP 0032.scaffold00124 237506 1 C G scaffold69 ScafM SNP 0032.scaffold00124 237531 1 G A scaffold69 ScafM SNP 0032.scaffold00124 237541 1 A G scaffold69 ScafM SNP 0032.scaffold00124 237565 1 T G scaffold69 ScafM SNP 0032.scaffold00124 237590 1 C A scaffold69 ScafM INDEL 0032.scaffold00124 237596 8 ........ CCATAGCC scaffold69 ScafM SNP 0032.scaffold00124 237626 1 T C scaffold69 ScafM SNP 0032.scaffold00124 237635 1 G A scaffold69 ScafM SNP 0032.scaffold00124 237972 1 G A scaffold69 Both SNP 0032.scaffold00124 238369 1 C T scaffold69 ReadM SNP 0032.scaffold00124 238490 1 C G - ReadM SNP 0032.scaffold00124 238527 1 C A - ReadM SNP 0032.scaffold00124 238541 1 C T - ReadM SNP 0032.scaffold00124 238606 1 G A - ReadM SNP 0032.scaffold00124 238714 1 G A - ReadM SNP 0032.scaffold00124 238893 1 C T - ReadM SNP 0032.scaffold00124 238945 1 A C - ReadM SNP 0032.scaffold00124 238956 1 T C - ReadM SNP 0032.scaffold00124 239224 1 G A - ReadM SNP 0032.scaffold00124 239252 1 A G - ReadM SNP 0032.scaffold00124 239271 1 G A - ReadM SNP 0032.scaffold00124 239281 1 A G - Both SNP 0032.scaffold00124 239368 1 G A scaffold69 Both SNP 0032.scaffold00124 239501 1 T G scaffold69 Both SNP 0032.scaffold00124 239697 1 T G scaffold69 ScafM SNP 0032.scaffold00124 239860 1 C T scaffold69 ScafM SNP 0032.scaffold00124 239913 1 A G scaffold69 ScafM SNP 0032.scaffold00124 243731 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 243761 1 T C scaffold9513 ScafM INDEL 0032.scaffold00124 243771 2 .. TG scaffold9513 ScafM SNP 0032.scaffold00124 243784 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 243818 1 A G scaffold9513 ScafM INDEL 0032.scaffold00124 243833 1 A . scaffold9513 ScafM SNP 0032.scaffold00124 243835 1 A G scaffold9513 ScafM INDEL 0032.scaffold00124 243858 1 . A scaffold9513 ScafM INDEL 0032.scaffold00124 243865 1 . T scaffold9513 ScafM SNP 0032.scaffold00124 243869 1 A C scaffold9513 ScafM INDEL 0032.scaffold00124 243873 1 T . scaffold9513 ScafM SNP 0032.scaffold00124 243888 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 243916 1 A C scaffold9513 ScafM SNP 0032.scaffold00124 243919 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 243929 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 243936 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 243943 1 C A scaffold9513 ScafM SNP 0032.scaffold00124 244046 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 244067 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244070 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244072 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244084 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 244123 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 244126 3 TTA CAC scaffold9513 ScafM SNP 0032.scaffold00124 244176 1 C T scaffold9513 ScafM INDEL 0032.scaffold00124 244217 11 GCTTCAAACAC ........... scaffold9513 ScafM INDEL 0032.scaffold00124 244229 3 TTC ... scaffold9513 ScafM INDEL 0032.scaffold00124 244236 5 CAACC ..... scaffold9513 ScafM INDEL 0032.scaffold00124 244243 9 AAACCCAAA ......... scaffold9513 ScafM INDEL 0032.scaffold00124 244272 6 CATAAC ...... scaffold9513 ScafM SNP 0032.scaffold00124 244299 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 244371 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244377 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244408 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244474 1 A T scaffold9513 ScafM SNP 0032.scaffold00124 244523 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 244538 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244617 1 G A scaffold9513 ScafM INDEL 0032.scaffold00124 244627 1 T . scaffold9513 ScafM SNP 0032.scaffold00124 244638 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244665 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244728 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 244731 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 244779 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 244848 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 244869 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244881 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244956 1 G A scaffold9513 ScafM SNP 0032.scaffold00124 244971 1 A G scaffold9513 ScafM SNP 0032.scaffold00124 244992 1 T G scaffold9513 ScafM SNP 0032.scaffold00124 244998 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 245042 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 245078 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 245138 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 245204 1 C T scaffold9513 ScafM SNP 0032.scaffold00124 245208 1 T C scaffold9513 ScafM SNP 0032.scaffold00124 245229 1 G A scaffold9513 ReadM SNP 0032.scaffold00124 245247 1 G A - ScafM SNP 0032.scaffold00124 245956 1 A G scaffold69 ScafM SNP 0032.scaffold00124 246207 1 G A scaffold69 Both SNP 0032.scaffold00124 246315 1 G A scaffold69 Both SNP 0032.scaffold00124 246405 1 G T scaffold69 Both SNP 0032.scaffold00124 246481 1 C T scaffold69 Both SNP 0032.scaffold00124 246486 1 T C scaffold69 Both SNP 0032.scaffold00124 246511 1 T C scaffold69 Both SNP 0032.scaffold00124 246601 1 A G scaffold69 ScafM SNP 0032.scaffold00124 246776 1 G A scaffold69 ScafM SNP 0032.scaffold00124 246873 1 C T scaffold69 ScafM SNP 0032.scaffold00124 246925 1 T A scaffold69 ScafM INDEL 0032.scaffold00124 247001 12 ............ ATATATATACAT scaffold69 ScafM INDEL 0032.scaffold00124 247029 4 AATA .... scaffold69 Both SNP 0032.scaffold00124 247115 1 G A scaffold69 Both INDEL 0032.scaffold00124 247140 1 T . scaffold69 ScafM SNP 0032.scaffold00124 247839 1 G A scaffold69 ScafM SNP 0032.scaffold00124 247884 1 A G scaffold69 ScafM SNP 0032.scaffold00124 248081 1 C A scaffold69 ScafM INDEL 0032.scaffold00124 248475 1 . T scaffold69 ScafM SNP 0032.scaffold00124 248484 1 A C scaffold69 ScafM INDEL 0032.scaffold00124 248530 1 . T scaffold69 ScafM INDEL 0032.scaffold00124 248563 4 .... CGGC scaffold69 Both SNP 0032.scaffold00124 248791 1 C T scaffold69 Both SNP 0032.scaffold00124 248797 1 G A scaffold69 ReadM SNP 0032.scaffold00124 249089 1 T G - ReadM SNP 0032.scaffold00124 249100 1 T C - ReadM SNP 0032.scaffold00124 249149 1 T C - ReadM SNP 0032.scaffold00124 249180 1 A G - ReadM INDEL 0032.scaffold00124 249467 1 G . - ReadM INDEL 0032.scaffold00124 249509 1 A . - ReadM SNP 0032.scaffold00124 249722 1 G T - Both SNP 0032.scaffold00124 249828 1 C T scaffold69 ReadM SNP 0032.scaffold00124 249979 1 T C - ReadM SNP 0032.scaffold00124 250091 1 C T - ReadM INDEL 0032.scaffold00124 250096 1 . C - ReadM SNP 0032.scaffold00124 250345 1 G T - ReadM SNP 0032.scaffold00124 250353 1 A G - Both SNP 0032.scaffold00124 250435 1 G C scaffold69 Both SNP 0032.scaffold00124 250482 1 T C scaffold69 Both SNP 0032.scaffold00124 250550 1 A T scaffold69 Both INDEL 0032.scaffold00124 250594 1 . C scaffold69 Both SNP 0032.scaffold00124 250740 1 C T scaffold69 Both SNP 0032.scaffold00124 250825 1 C T scaffold69 ScafM INDEL 0032.scaffold00124 251015 1 A . scaffold69 ScafM SNP 0032.scaffold00124 251017 1 A T scaffold69 ScafM INDEL 0032.scaffold00124 251535 11 ACTACAGTAGT ........... scaffold69 Both INDEL 0032.scaffold00124 251657 2 .. TG scaffold69 ScafM SNP 0032.scaffold00124 251751 2 AC CT scaffold69 Both INDEL 0032.scaffold00124 251879 1 T . scaffold69 Both SNP 0032.scaffold00124 251891 1 C A scaffold69 ScafM INDEL 0032.scaffold00124 252001 14 GGATGAAATTAATA .............. scaffold69 Both SNP 0032.scaffold00124 252098 1 C T scaffold69 ScafM INDEL 0032.scaffold00124 252127 3 ... ATT scaffold69 ReadM SNP 0032.scaffold00124 252227 1 T C - ReadM SNP 0032.scaffold00124 252233 1 C T - ReadM SNP 0032.scaffold00124 252656 1 A G - Both SNP 0032.scaffold00124 252687 1 G A scaffold69 ReadM SNP 0032.scaffold00124 252761 1 C T - ReadM SNP 0032.scaffold00124 252850 1 A G - ReadM SNP 0032.scaffold00124 253013 1 C T - ReadM SNP 0032.scaffold00124 253026 1 G A - ReadM SNP 0032.scaffold00124 253196 1 T C - ReadM SNP 0032.scaffold00124 253241 1 T C - Both SNP 0032.scaffold00124 253286 1 T C scaffold69 ScafM INDEL 0032.scaffold00124 253328 1 A . scaffold69 Both SNP 0032.scaffold00124 253335 1 G A scaffold69 ReadM SNP 0032.scaffold00124 253495 1 A T - ScafM SNP 0032.scaffold00124 255143 1 C G scaffold69 ScafM INDEL 0032.scaffold00124 255213 2 TA .. scaffold69 ScafM SNP 0032.scaffold00124 255343 1 G A scaffold69 ScafM SNP 0032.scaffold00124 255386 1 A G scaffold69 ScafM SNP 0032.scaffold00124 255392 1 A C scaffold69 ScafM SNP 0032.scaffold00124 255401 1 A G scaffold69 ScafM SNP 0032.scaffold00124 255412 1 A G scaffold69 ScafM INDEL 0032.scaffold00124 255426 15 ............... AAACATTAATTATGC scaffold69 ScafM SNP 0032.scaffold00124 255479 1 G A scaffold69 ScafM SNP 0032.scaffold00124 255549 1 A T scaffold69 ScafM SNP 0032.scaffold00124 255566 1 A T scaffold69 ScafM SNP 0032.scaffold00124 257125 1 T C scaffold69 ScafM SNP 0032.scaffold00124 257244 1 T A scaffold69 ScafM SNP 0032.scaffold00124 257253 1 G A scaffold69 ScafM INDEL 0032.scaffold00124 257331 1 A . scaffold69 ScafM SNP 0032.scaffold00124 257379 2 CT AA scaffold69 ScafM SNP 0032.scaffold00124 257452 1 T C scaffold69 ScafM SNP 0032.scaffold00124 257472 1 T G scaffold69 ScafM SNP 0032.scaffold00124 257510 1 C G scaffold69 ScafM INDEL 0032.scaffold00124 257528 1 A . scaffold69 ScafM SNP 0032.scaffold00124 257835 1 T C scaffold9744 ScafM SNP 0032.scaffold00124 257846 1 C T scaffold9744 ScafM SNP 0032.scaffold00124 257911 1 T C scaffold9744 ScafM SNP 0032.scaffold00124 257960 1 G A scaffold9744 ScafM SNP 0032.scaffold00124 257978 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 257980 1 A G scaffold9744 ScafM INDEL 0032.scaffold00124 257991 1 . A scaffold9744 ScafM SNP 0032.scaffold00124 258061 1 A G scaffold9744 ScafM INDEL 0032.scaffold00124 258071 11 AACACAAAGAA ........... scaffold9744 ScafM SNP 0032.scaffold00124 258142 1 C T scaffold9744 ScafM INDEL 0032.scaffold00124 258189 16 ATTCTCATTATATTCT ................ scaffold9744 ScafM INDEL 0032.scaffold00124 258207 2 TT .. scaffold9744 ScafM SNP 0032.scaffold00124 258230 1 T G scaffold9744 ScafM SNP 0032.scaffold00124 258306 1 G A scaffold9744 ScafM SNP 0032.scaffold00124 258337 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 258356 1 C T scaffold9744 ScafM SNP 0032.scaffold00124 258445 1 C G scaffold9744 ScafM SNP 0032.scaffold00124 258451 1 G A scaffold9744 ScafM SNP 0032.scaffold00124 258496 1 A T scaffold9744 ScafM SNP 0032.scaffold00124 258813 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 258825 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 258862 1 T A scaffold9744 ScafM SNP 0032.scaffold00124 258877 1 G T scaffold9744 ScafM SNP 0032.scaffold00124 258879 1 C A scaffold9744 ScafM SNP 0032.scaffold00124 258908 2 CT TC scaffold9744 ScafM SNP 0032.scaffold00124 258919 1 G A scaffold9744 ScafM SNP 0032.scaffold00124 258934 1 T C scaffold9744 ScafM SNP 0032.scaffold00124 258944 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 258970 2 AG GC scaffold9744 ScafM SNP 0032.scaffold00124 258975 1 A T scaffold9744 ScafM SNP 0032.scaffold00124 258977 1 A G scaffold9744 ScafM SNP 0032.scaffold00124 259408 1 G A scaffold64918 ScafM SNP 0032.scaffold00124 259422 1 T C scaffold64918 ScafM SNP 0032.scaffold00124 259457 1 C T scaffold64918 ScafM SNP 0032.scaffold00124 259468 1 G A scaffold64918 ScafM SNP 0032.scaffold00124 259498 1 A G scaffold64918 ScafM SNP 0032.scaffold00124 259856 1 A C scaffold64918 ScafM SNP 0032.scaffold00124 259887 1 C T scaffold64918 ScafM SNP 0032.scaffold00124 259901 1 C T scaffold64918 ScafM SNP 0032.scaffold00124 259927 1 A C scaffold64918 ScafM SNP 0032.scaffold00124 259946 1 A G scaffold64918 ScafM SNP 0032.scaffold00124 259953 1 A G scaffold64918 ScafM SNP 0032.scaffold00124 260027 1 G T scaffold64918 ScafM SNP 0032.scaffold00124 260063 1 G A scaffold64918 ScafM SNP 0032.scaffold00124 261338 1 G A scaffold69 ScafM SNP 0032.scaffold00124 261388 1 T A scaffold69 ScafM INDEL 0032.scaffold00124 261457 1 . T scaffold69 ScafM INDEL 0032.scaffold00124 261464 2 TC .. scaffold69 ScafM SNP 0032.scaffold00124 261474 1 T C scaffold69 ScafM INDEL 0032.scaffold00124 261595 1 . T scaffold69 ScafM SNP 0032.scaffold00124 261640 1 G A scaffold69 Both SNP 0032.scaffold00124 261719 1 C T scaffold69 ScafM SNP 0032.scaffold00124 261812 1 C T scaffold69 Both SNP 0032.scaffold00124 261826 1 G A scaffold69 Both SNP 0032.scaffold00124 261876 1 T A scaffold69 ScafM INDEL 0032.scaffold00124 261885 1 . A scaffold69 ScafM SNP 0032.scaffold00124 261895 1 T C scaffold69 ScafM SNP 0032.scaffold00124 261991 1 G A scaffold69 ScafM INDEL 0032.scaffold00124 262023 13 ............. AAGTTTTGAAGAG scaffold69 Both INDEL 0032.scaffold00124 262103 1 A . scaffold69 ScafM SNP 0032.scaffold00124 262110 1 A G scaffold69 Both SNP 0032.scaffold00124 262289 1 G T scaffold69 Both SNP 0032.scaffold00124 262298 1 A C scaffold69 Both INDEL 0032.scaffold00124 262624 1 A . scaffold69 ScafM SNP 0032.scaffold00124 262631 1 G A scaffold69 ScafM INDEL 0032.scaffold00124 262690 1 . A scaffold69 ReadM SNP 0032.scaffold00124 262718 1 A G - ReadM SNP 0032.scaffold00124 263020 1 T C - ReadM SNP 0032.scaffold00124 263042 1 G A - ReadM SNP 0032.scaffold00124 263197 1 A T - ReadM SNP 0032.scaffold00124 263460 1 C T - ReadM SNP 0032.scaffold00124 263487 1 G A - ReadM SNP 0032.scaffold00124 263557 1 C T - ReadM SNP 0032.scaffold00124 263594 1 A G - ReadM SNP 0032.scaffold00124 263604 1 A G - ReadM SNP 0032.scaffold00124 263726 1 C T - ReadM SNP 0032.scaffold00124 263773 1 G A - ReadM SNP 0032.scaffold00124 263813 1 G A - ReadM SNP 0032.scaffold00124 263846 1 T C - ReadM SNP 0032.scaffold00124 264009 1 T A - ReadM SNP 0032.scaffold00124 264023 1 T C - Both SNP 0032.scaffold00124 264167 1 C A scaffold69 ScafM INDEL 0032.scaffold00124 264228 2 TT .A scaffold69 ScafM SNP 0032.scaffold00124 264414 1 A G scaffold69 ScafM SNP 0032.scaffold00124 264578 1 A T scaffold69 ScafM INDEL 0032.scaffold00124 265013 3 AAT ... scaffold69 ScafM INDEL 0032.scaffold00124 265034 1 . A scaffold69 ScafM SNP 0032.scaffold00124 265057 1 C A scaffold69 ScafM SNP 0032.scaffold00124 265092 1 T C scaffold69 ScafM SNP 0032.scaffold00124 265130 1 A T scaffold69 ScafM SNP 0032.scaffold00124 265132 1 T C scaffold69 Both INDEL 0032.scaffold00124 265250 1 C . scaffold69 ScafM SNP 0032.scaffold00124 265312 1 T C scaffold69 ScafM SNP 0032.scaffold00124 265329 1 A C scaffold69 Both SNP 0032.scaffold00124 265349 1 T C scaffold69 Both SNP 0032.scaffold00124 265384 1 A C scaffold69 ScafM SNP 0032.scaffold00124 265623 1 G C scaffold69 Both SNP 0032.scaffold00124 265661 1 A G scaffold69 Both SNP 0032.scaffold00124 265683 1 C T scaffold69 Both SNP 0032.scaffold00124 265694 1 T G scaffold69 ScafM SNP 0032.scaffold00124 265760 1 T C scaffold69 ScafM SNP 0032.scaffold00124 265779 1 C T scaffold69 ScafM SNP 0032.scaffold00124 265784 1 G C scaffold69 ScafM SNP 0032.scaffold00124 265799 1 C A scaffold69 Both SNP 0032.scaffold00124 265933 1 C T scaffold69 Both SNP 0032.scaffold00124 265970 1 C T scaffold69 Both SNP 0032.scaffold00124 265996 1 G A scaffold69 Both SNP 0032.scaffold00124 266025 1 A T scaffold69 Both SNP 0032.scaffold00124 266089 1 T C scaffold69 Both SNP 0032.scaffold00124 266126 1 T C scaffold69 ScafM INDEL 0032.scaffold00124 266178 5 ..... CTTAG scaffold69 ReadM SNP 0032.scaffold00124 266179 1 G C - ScafM INDEL 0032.scaffold00124 266179 11 ........... AAACAAAATAC scaffold69 Both SNP 0032.scaffold00124 266224 1 G A scaffold69 Both SNP 0032.scaffold00124 266257 1 A G scaffold69 Both SNP 0032.scaffold00124 266303 1 T G scaffold69 ReadM SNP 0032.scaffold00124 266679 1 C T - Both SNP 0032.scaffold00124 266929 1 T C scaffold69 ReadM SNP 0032.scaffold00124 266954 1 A C - ReadM SNP 0032.scaffold00124 267003 1 A G - ReadM INDEL 0032.scaffold00124 267048 1 . A - Both SNP 0032.scaffold00124 267092 1 G A scaffold69 Both SNP 0032.scaffold00124 267287 2 TT CG scaffold69 Both SNP 0032.scaffold00124 267310 1 C T scaffold69 ReadM SNP 0032.scaffold00124 267453 1 C T - ReadM SNP 0032.scaffold00124 267527 1 G A - ReadM SNP 0032.scaffold00124 267774 1 T C - ReadM SNP 0032.scaffold00124 272329 1 G A - ReadM SNP 0032.scaffold00124 272390 1 G A - ReadM INDEL 0032.scaffold00124 272403 1 . G - ReadM INDEL 0032.scaffold00124 272568 1 T . - ReadM SNP 0032.scaffold00124 272627 1 G C - ReadM SNP 0032.scaffold00124 272666 1 T C - ReadM SNP 0032.scaffold00124 272678 1 T C - ReadM SNP 0032.scaffold00124 272772 1 C A - ReadM SNP 0032.scaffold00124 272869 1 C T - ReadM SNP 0032.scaffold00124 272907 1 C A - ReadM INDEL 0032.scaffold00124 273047 1 T . - ReadM SNP 0032.scaffold00124 273095 1 A T - ReadM SNP 0032.scaffold00124 273213 1 G T - ReadM SNP 0032.scaffold00124 273269 1 G A - ReadM SNP 0032.scaffold00124 273377 1 T C - ReadM SNP 0032.scaffold00124 273503 1 G T - ReadM SNP 0032.scaffold00124 273506 1 A G - ReadM SNP 0032.scaffold00124 273548 1 G A - ReadM SNP 0032.scaffold00124 273703 1 G T - ReadM SNP 0032.scaffold00124 273784 1 C T - ReadM SNP 0032.scaffold00124 273958 1 C T - ReadM SNP 0032.scaffold00124 273964 1 C T - ReadM SNP 0032.scaffold00124 274048 1 G A - ReadM SNP 0032.scaffold00124 274068 1 T C - ReadM SNP 0032.scaffold00124 274152 2 CC TG - ReadM SNP 0032.scaffold00124 274254 1 C T - ReadM SNP 0032.scaffold00124 274353 1 T C - ReadM SNP 0032.scaffold00124 274599 1 T A - ReadM SNP 0032.scaffold00124 274652 1 A T - ReadM SNP 0032.scaffold00124 274664 1 G A - ReadM SNP 0032.scaffold00124 279503 1 T C - ReadM SNP 0032.scaffold00124 279567 1 A G - ReadM SNP 0032.scaffold00124 279625 1 A G - ReadM SNP 0032.scaffold00124 279653 1 C T - ReadM SNP 0032.scaffold00124 279716 1 C T - ReadM SNP 0032.scaffold00124 279909 1 T C - ReadM SNP 0032.scaffold00124 279922 1 A C - ReadM SNP 0032.scaffold00124 279996 1 T A - ReadM INDEL 0032.scaffold00124 280005 1 A . - ReadM SNP 0032.scaffold00124 280047 1 A G - ReadM INDEL 0032.scaffold00124 280244 1 . T - ReadM SNP 0032.scaffold00124 280278 1 A G - ReadM SNP 0032.scaffold00124 280334 1 A G - Both SNP 0032.scaffold00124 280456 1 T C scaffold18255 ReadM SNP 0032.scaffold00124 280607 1 A G - ReadM SNP 0032.scaffold00124 280634 1 G A - Both SNP 0032.scaffold00124 280679 1 G A scaffold18255 ReadM SNP 0032.scaffold00124 280740 1 T C - ReadM SNP 0032.scaffold00124 280774 1 A G - ReadM SNP 0032.scaffold00124 280863 1 C T - ReadM SNP 0032.scaffold00124 280924 1 C T - ReadM SNP 0032.scaffold00124 280931 1 G A - ReadM SNP 0032.scaffold00124 280951 1 T C - ReadM SNP 0032.scaffold00124 281014 1 T A - ReadM SNP 0032.scaffold00124 281030 1 A G - ReadM SNP 0032.scaffold00124 281069 1 G T - ReadM SNP 0032.scaffold00124 281146 1 A G - ReadM SNP 0032.scaffold00124 281404 1 A G - ReadM SNP 0032.scaffold00124 281454 1 G A - ReadM SNP 0032.scaffold00124 281514 1 G A - ReadM SNP 0032.scaffold00124 281566 1 G T - ReadM SNP 0032.scaffold00124 281728 1 A G - ReadM SNP 0032.scaffold00124 281810 1 T C - Both SNP 0032.scaffold00124 281922 1 A G scaffold18255 Both SNP 0032.scaffold00124 281978 1 G C scaffold18255 Both SNP 0032.scaffold00124 281995 1 T C scaffold18255 Both SNP 0032.scaffold00124 282022 1 T C scaffold18255 Both SNP 0032.scaffold00124 282088 1 C T scaffold18255 Both SNP 0032.scaffold00124 282135 1 C T scaffold18255 Both SNP 0032.scaffold00124 282236 1 C T scaffold18255 Both SNP 0032.scaffold00124 282251 1 A C scaffold18255 ScafM INDEL 0032.scaffold00124 282264 3 ... TGT scaffold18255 ReadM SNP 0032.scaffold00124 282422 1 C T - ReadM SNP 0032.scaffold00124 282465 1 C T - ReadM SNP 0032.scaffold00124 282534 1 T C - ReadM SNP 0032.scaffold00124 282624 1 G A - ReadM SNP 0032.scaffold00124 282634 1 A G - ReadM SNP 0032.scaffold00124 282733 1 C T - ReadM SNP 0032.scaffold00124 282747 1 C A - ReadM SNP 0032.scaffold00124 283063 1 A G - ReadM SNP 0032.scaffold00124 283079 1 C T - ReadM SNP 0032.scaffold00124 283095 1 T C - ReadM SNP 0032.scaffold00124 283126 1 G C - ReadM SNP 0032.scaffold00124 283179 1 C A - ReadM SNP 0032.scaffold00124 283209 1 C A - Both SNP 0032.scaffold00124 283244 1 C T scaffold18255 Both SNP 0032.scaffold00124 283317 1 G T scaffold18255 Both SNP 0032.scaffold00124 283327 1 C A scaffold18255 Both SNP 0032.scaffold00124 283405 1 G C scaffold18255 ReadM SNP 0032.scaffold00124 283602 1 C T - ReadM SNP 0032.scaffold00124 283926 1 C A - ReadM SNP 0032.scaffold00124 283990 1 C G - ReadM SNP 0032.scaffold00124 284038 1 T C - ReadM SNP 0032.scaffold00124 284106 1 C A - ReadM SNP 0032.scaffold00124 284132 1 T G - ReadM SNP 0032.scaffold00124 284167 1 G A - ReadM SNP 0032.scaffold00124 284237 1 T A - ReadM SNP 0032.scaffold00124 284391 1 C A - ReadM SNP 0032.scaffold00124 284424 1 G A - ReadM SNP 0032.scaffold00124 284440 1 T C - ReadM SNP 0032.scaffold00124 284569 1 T A - ReadM SNP 0032.scaffold00124 284594 1 A G - ReadM SNP 0032.scaffold00124 284674 1 T G - ReadM SNP 0032.scaffold00124 284684 1 A T - ReadM SNP 0032.scaffold00124 284720 1 C T - ReadM SNP 0032.scaffold00124 284755 1 G A - ReadM SNP 0032.scaffold00124 284811 1 G C - ReadM SNP 0032.scaffold00124 284861 1 A T - ReadM SNP 0032.scaffold00124 284892 1 A G - ReadM SNP 0032.scaffold00124 284982 1 T C - ReadM SNP 0032.scaffold00124 285010 1 G A - ReadM SNP 0032.scaffold00124 285178 1 T A - ReadM SNP 0032.scaffold00124 285310 1 A G - ReadM SNP 0032.scaffold00124 285407 1 T C - ReadM SNP 0032.scaffold00124 285462 1 C T - ReadM SNP 0032.scaffold00124 285501 1 T C - ReadM SNP 0032.scaffold00124 285522 1 A C - ReadM SNP 0032.scaffold00124 285541 1 C T - ReadM SNP 0032.scaffold00124 285664 1 C T - ReadM SNP 0032.scaffold00124 285683 1 G A - ReadM SNP 0032.scaffold00124 285752 1 G T - ReadM SNP 0032.scaffold00124 285763 1 T C - ReadM SNP 0032.scaffold00124 285871 1 A G - ReadM SNP 0032.scaffold00124 285898 1 T C - ReadM SNP 0032.scaffold00124 285933 1 C T - ReadM SNP 0032.scaffold00124 285936 1 T G - ReadM SNP 0032.scaffold00124 286045 1 A G - ReadM SNP 0032.scaffold00124 286055 1 A T - ReadM INDEL 0032.scaffold00124 286075 1 . C - ReadM SNP 0032.scaffold00124 286099 1 A T - ReadM SNP 0032.scaffold00124 286157 1 G T - ReadM SNP 0032.scaffold00124 286163 1 A G - ReadM SNP 0032.scaffold00124 286210 1 T C - ReadM SNP 0032.scaffold00124 286349 1 T C - ReadM SNP 0032.scaffold00124 286399 1 T C - ReadM SNP 0032.scaffold00124 286401 1 A C - ReadM SNP 0032.scaffold00124 286442 1 A C - ReadM SNP 0032.scaffold00124 286476 1 A G - ReadM SNP 0032.scaffold00124 286516 1 G A - ReadM SNP 0032.scaffold00124 286555 1 T A - ReadM SNP 0032.scaffold00124 286563 1 A G - ReadM SNP 0032.scaffold00124 286572 1 A G - ReadM SNP 0032.scaffold00124 286691 1 T C - ReadM SNP 0032.scaffold00124 286719 1 A G - ReadM SNP 0032.scaffold00124 286825 1 C T - ReadM SNP 0032.scaffold00124 286973 1 C T - ReadM SNP 0032.scaffold00124 287026 1 G A - ReadM SNP 0032.scaffold00124 287137 1 G A - ReadM SNP 0032.scaffold00124 287357 1 C T - ReadM SNP 0032.scaffold00124 287423 1 G C - ReadM SNP 0032.scaffold00124 287489 1 T G - ReadM SNP 0032.scaffold00124 287600 1 T A - ReadM SNP 0032.scaffold00124 287633 1 T C - ReadM SNP 0032.scaffold00124 287689 1 G A - ReadM SNP 0032.scaffold00124 287705 1 G A - ReadM SNP 0032.scaffold00124 287722 1 C A - ReadM SNP 0032.scaffold00124 287769 1 A G - ReadM SNP 0032.scaffold00124 287779 1 A G - ReadM SNP 0032.scaffold00124 287818 1 A G - ReadM INDEL 0032.scaffold00124 287966 1 . A - ReadM SNP 0032.scaffold00124 288006 1 C G - ReadM SNP 0032.scaffold00124 288021 1 T G - ReadM SNP 0032.scaffold00124 288035 1 G A - ReadM SNP 0032.scaffold00124 288116 1 C T - ScafM SNP 0032.scaffold00124 288974 1 G A scaffold18255 ScafM SNP 0032.scaffold00124 288979 1 C T scaffold18255 ScafM SNP 0032.scaffold00124 289001 1 A C scaffold18255 ScafM SNP 0032.scaffold00124 289016 1 C T scaffold18255 ScafM SNP 0032.scaffold00124 289073 1 A G scaffold18255 ScafM SNP 0032.scaffold00124 289114 1 C T scaffold18255 ScafM SNP 0032.scaffold00124 289120 1 C T scaffold18255 ScafM SNP 0032.scaffold00124 289123 1 A G scaffold18255 ScafM SNP 0032.scaffold00124 289140 1 G A scaffold18255 ScafM SNP 0032.scaffold00124 289160 1 T G scaffold18255 ScafM SNP 0032.scaffold00124 289163 1 T G scaffold18255 ScafM SNP 0032.scaffold00124 289168 1 T G scaffold18255 ScafM SNP 0032.scaffold00124 289183 1 A G scaffold18255 ScafM SNP 0032.scaffold00124 289243 1 T C scaffold18255 ScafM SNP 0032.scaffold00124 289283 1 A G scaffold18255 ScafM SNP 0032.scaffold00124 289293 1 T C scaffold18255 ScafM SNP 0032.scaffold00124 289305 1 C T scaffold18255 ScafM SNP 0032.scaffold00124 289751 1 C T scaffold18255 ReadM SNP 0032.scaffold00124 290313 1 T A - ReadM SNP 0032.scaffold00124 290340 1 A G - ReadM SNP 0032.scaffold00124 290448 1 C T - ReadM SNP 0032.scaffold00124 290526 1 G A - ReadM SNP 0032.scaffold00124 290533 1 A G - ReadM SNP 0032.scaffold00124 290685 1 G A - ReadM SNP 0032.scaffold00124 290768 1 T C - ReadM SNP 0032.scaffold00124 290779 1 A G - ReadM SNP 0032.scaffold00124 290938 1 C A - ReadM SNP 0032.scaffold00124 290998 1 T C - ReadM INDEL 0032.scaffold00124 291009 1 T . - ReadM SNP 0032.scaffold00124 291129 1 G A - ReadM SNP 0032.scaffold00124 291444 1 C T - ReadM SNP 0032.scaffold00124 291488 1 C T - ReadM SNP 0032.scaffold00124 291570 1 C T - ReadM SNP 0032.scaffold00124 291588 1 C T - ReadM SNP 0032.scaffold00124 291649 1 G C - ReadM SNP 0032.scaffold00124 291669 1 G C - ReadM SNP 0032.scaffold00124 291709 1 C T - ReadM SNP 0032.scaffold00124 291723 1 G T - ReadM SNP 0032.scaffold00124 291775 1 A G - ReadM SNP 0032.scaffold00124 291844 1 A G - ReadM SNP 0032.scaffold00124 291892 1 A G - ReadM SNP 0032.scaffold00124 292002 1 G A - ReadM SNP 0032.scaffold00124 292080 1 G C - ReadM SNP 0032.scaffold00124 292091 1 A G - ReadM SNP 0032.scaffold00124 292147 1 C T - ReadM SNP 0032.scaffold00124 292206 1 A G - ReadM SNP 0032.scaffold00124 292289 1 T A - ReadM SNP 0032.scaffold00124 292359 1 T C - ReadM SNP 0032.scaffold00124 292518 1 T C - ReadM SNP 0032.scaffold00124 292530 1 G T - ReadM SNP 0032.scaffold00124 292554 1 A C - ReadM SNP 0032.scaffold00124 292573 1 C G - ReadM SNP 0032.scaffold00124 292637 1 T C - ReadM SNP 0032.scaffold00124 292730 1 T C - ReadM SNP 0032.scaffold00124 292760 1 T C - ReadM SNP 0032.scaffold00124 292799 1 C T - ReadM SNP 0032.scaffold00124 292890 1 C T - ReadM SNP 0032.scaffold00124 293220 1 T C - ReadM SNP 0032.scaffold00124 293272 1 G A - ReadM SNP 0032.scaffold00124 293281 1 A C - ReadM SNP 0032.scaffold00124 293367 1 T A - ReadM SNP 0032.scaffold00124 293423 1 C T - ReadM SNP 0032.scaffold00124 293425 1 C G - ReadM SNP 0032.scaffold00124 293429 1 C T - ReadM SNP 0032.scaffold00124 293500 1 C G - ReadM SNP 0032.scaffold00124 293560 1 C T - ReadM SNP 0032.scaffold00124 293626 1 T C - ReadM SNP 0032.scaffold00124 293634 1 T C - ReadM SNP 0032.scaffold00124 293653 1 T A - ReadM SNP 0032.scaffold00124 293715 1 G T - ReadM SNP 0032.scaffold00124 293735 1 C A - ReadM SNP 0032.scaffold00124 293846 1 A C - ReadM SNP 0032.scaffold00124 293855 1 C A - ReadM SNP 0032.scaffold00124 295060 1 G C - ReadM SNP 0032.scaffold00124 295080 1 C A - ReadM SNP 0032.scaffold00124 295164 1 G T - ReadM INDEL 0032.scaffold00124 295229 1 . A - ReadM SNP 0032.scaffold00124 295292 1 A T - ReadM SNP 0032.scaffold00124 295412 1 A C - ReadM SNP 0032.scaffold00124 295452 1 G C - ReadM SNP 0032.scaffold00124 295550 1 C T - ReadM SNP 0032.scaffold00124 295581 1 T C - ReadM SNP 0032.scaffold00124 295605 1 G T - ReadM SNP 0032.scaffold00124 295635 1 T C - ReadM SNP 0032.scaffold00124 295798 1 C T - ReadM SNP 0032.scaffold00124 305671 1 A G - ReadM SNP 0032.scaffold00124 305725 1 T C - ReadM SNP 0032.scaffold00124 305738 1 C A - ReadM SNP 0032.scaffold00124 305855 1 A G - ReadM SNP 0032.scaffold00124 305860 1 G A - ReadM SNP 0032.scaffold00124 305971 1 A G - ReadM SNP 0032.scaffold00124 306059 1 A G - ReadM SNP 0032.scaffold00124 306294 1 T C - ReadM SNP 0032.scaffold00124 306314 1 A G - ReadM SNP 0032.scaffold00124 306408 1 C T - ReadM SNP 0032.scaffold00124 306420 1 G A - ReadM INDEL 0032.scaffold00124 306461 1 . A - Both INDEL 0032.scaffold00124 306511 2 AA .. scaffold10829 Both SNP 0032.scaffold00124 306629 1 G A scaffold10829 Both SNP 0032.scaffold00124 306692 1 T C scaffold10829 Both SNP 0032.scaffold00124 306732 1 C T scaffold10829 Both SNP 0032.scaffold00124 306765 1 T C scaffold10829 Both SNP 0032.scaffold00124 306807 1 G A scaffold10829 Both SNP 0032.scaffold00124 306860 1 A C scaffold10829 Both SNP 0032.scaffold00124 306895 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 306945 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 306949 2 GG AA scaffold10829 ScafM SNP 0032.scaffold00124 306963 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 306968 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 307022 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 307046 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 307144 1 C G scaffold10829 Both SNP 0032.scaffold00124 307248 1 C A scaffold10829 Both SNP 0032.scaffold00124 307380 1 A C scaffold10829 Both SNP 0032.scaffold00124 307390 1 G A scaffold10829 Both SNP 0032.scaffold00124 307406 1 C G scaffold10829 Both SNP 0032.scaffold00124 307442 1 A C scaffold10829 ScafM SNP 0032.scaffold00124 307572 2 AT GA scaffold10829 Both SNP 0032.scaffold00124 307658 1 T C scaffold10829 Both SNP 0032.scaffold00124 307740 1 T C scaffold10829 ScafM INDEL 0032.scaffold00124 307811 10 .......... TGGAAGTTCC scaffold10829 Both SNP 0032.scaffold00124 307894 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 307916 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 307923 1 C G scaffold10829 ScafM SNP 0032.scaffold00124 307925 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 307929 1 A T scaffold10829 Both SNP 0032.scaffold00124 307966 1 A T scaffold10829 Both SNP 0032.scaffold00124 307999 1 T G scaffold10829 Both SNP 0032.scaffold00124 308322 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 308496 1 G A scaffold10829 Both SNP 0032.scaffold00124 308712 1 C T scaffold10829 Both SNP 0032.scaffold00124 308772 1 T G scaffold10829 Both SNP 0032.scaffold00124 308788 1 A G scaffold10829 Both SNP 0032.scaffold00124 308844 1 A C scaffold10829 ScafM SNP 0032.scaffold00124 308852 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 308858 1 A C scaffold10829 ScafM SNP 0032.scaffold00124 308923 1 G T scaffold10829 ScafM SNP 0032.scaffold00124 308941 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 308945 1 A G scaffold10829 ReadM SNP 0032.scaffold00124 308985 1 G A - Both SNP 0032.scaffold00124 308999 1 T C scaffold10829 Both SNP 0032.scaffold00124 309064 1 T C scaffold10829 Both SNP 0032.scaffold00124 309165 1 C T scaffold10829 Both SNP 0032.scaffold00124 309179 1 C G scaffold10829 Both SNP 0032.scaffold00124 309239 1 C G scaffold10829 Both SNP 0032.scaffold00124 309313 1 G T scaffold10829 Both SNP 0032.scaffold00124 309387 1 C A scaffold10829 Both SNP 0032.scaffold00124 309389 1 T G scaffold10829 Both SNP 0032.scaffold00124 309432 1 A C scaffold10829 Both INDEL 0032.scaffold00124 309539 1 . A scaffold10829 ScafM SNP 0032.scaffold00124 309545 1 C A scaffold10829 Both SNP 0032.scaffold00124 309586 1 T C scaffold10829 Both SNP 0032.scaffold00124 309605 1 G A scaffold10829 Both SNP 0032.scaffold00124 309664 1 A C scaffold10829 Both SNP 0032.scaffold00124 309969 1 C G scaffold10829 Both SNP 0032.scaffold00124 309991 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 309999 1 G A scaffold10829 Both SNP 0032.scaffold00124 310057 1 T G scaffold10829 Both SNP 0032.scaffold00124 310086 1 C T scaffold10829 Both SNP 0032.scaffold00124 310161 1 T C scaffold10829 Both SNP 0032.scaffold00124 310167 1 T C scaffold10829 Both INDEL 0032.scaffold00124 310263 1 . A scaffold10829 Both SNP 0032.scaffold00124 310275 1 T C scaffold10829 Both SNP 0032.scaffold00124 310361 1 T A scaffold10829 ScafM SNP 0032.scaffold00124 310416 1 C G scaffold10829 Both SNP 0032.scaffold00124 310451 1 G A scaffold10829 Both SNP 0032.scaffold00124 310466 1 C T scaffold10829 Both SNP 0032.scaffold00124 310468 1 A G scaffold10829 Both SNP 0032.scaffold00124 310555 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 310601 1 A G scaffold10829 Both SNP 0032.scaffold00124 310777 1 G C scaffold10829 ScafM SNP 0032.scaffold00124 310792 1 A C scaffold10829 ScafM SNP 0032.scaffold00124 310805 1 T A scaffold10829 ScafM SNP 0032.scaffold00124 310822 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 310833 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 310850 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 310858 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 310874 1 T C scaffold10829 ScafM INDEL 0032.scaffold00124 310924 6 ACGGAA ...... scaffold10829 Both SNP 0032.scaffold00124 310983 1 C T scaffold10829 Both SNP 0032.scaffold00124 311047 1 C T scaffold10829 Both SNP 0032.scaffold00124 311061 1 G A scaffold10829 Both SNP 0032.scaffold00124 311171 1 G T scaffold10829 Both SNP 0032.scaffold00124 311194 1 T G scaffold10829 ScafM INDEL 0032.scaffold00124 311223 1 A . scaffold10829 Both SNP 0032.scaffold00124 311234 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 311286 2 GT TC scaffold10829 ScafM SNP 0032.scaffold00124 311372 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 311404 1 T A scaffold10829 ScafM SNP 0032.scaffold00124 311432 1 G A scaffold10829 ReadM SNP 0032.scaffold00124 311461 1 T C - ReadM SNP 0032.scaffold00124 311852 1 G A - ReadM SNP 0032.scaffold00124 311873 1 A G - ReadM SNP 0032.scaffold00124 311879 1 C G - ReadM SNP 0032.scaffold00124 312066 1 C T - ReadM SNP 0032.scaffold00124 312124 1 C T - ReadM SNP 0032.scaffold00124 312164 1 C T - ReadM SNP 0032.scaffold00124 312169 1 G A - ReadM SNP 0032.scaffold00124 312214 1 T C - ReadM SNP 0032.scaffold00124 312273 1 A C - ReadM SNP 0032.scaffold00124 312291 1 C T - ReadM SNP 0032.scaffold00124 312293 1 G A - ReadM SNP 0032.scaffold00124 312332 1 T C - ReadM SNP 0032.scaffold00124 312389 1 T C - ReadM INDEL 0032.scaffold00124 312432 1 G . - ReadM SNP 0032.scaffold00124 312467 1 G A - ReadM SNP 0032.scaffold00124 312557 1 A G - ReadM SNP 0032.scaffold00124 312593 1 T C - ReadM SNP 0032.scaffold00124 312597 1 A T - ReadM SNP 0032.scaffold00124 312619 1 C T - ReadM SNP 0032.scaffold00124 312683 1 G A - ReadM SNP 0032.scaffold00124 312711 1 A T - ReadM SNP 0032.scaffold00124 312772 1 T C - ReadM INDEL 0032.scaffold00124 312796 1 T . - ReadM SNP 0032.scaffold00124 312847 1 G A - ReadM SNP 0032.scaffold00124 313267 1 T C - ReadM SNP 0032.scaffold00124 313276 1 A G - ReadM SNP 0032.scaffold00124 313624 1 T C - ReadM SNP 0032.scaffold00124 313634 1 G A - ReadM SNP 0032.scaffold00124 313679 1 A C - ReadM SNP 0032.scaffold00124 313734 1 T A - ReadM INDEL 0032.scaffold00124 313762 1 . T - ReadM SNP 0032.scaffold00124 313846 1 T A - ReadM SNP 0032.scaffold00124 313854 1 T G - ReadM SNP 0032.scaffold00124 313896 1 A T - ReadM SNP 0032.scaffold00124 314040 1 G A - ReadM SNP 0032.scaffold00124 314056 1 T C - ReadM SNP 0032.scaffold00124 314082 1 G C - ReadM INDEL 0032.scaffold00124 314115 1 . T - ReadM SNP 0032.scaffold00124 314305 1 T C - ReadM SNP 0032.scaffold00124 314383 1 T C - ReadM SNP 0032.scaffold00124 314480 1 G A - ReadM SNP 0032.scaffold00124 314522 1 A G - ReadM SNP 0032.scaffold00124 314565 1 G A - ReadM SNP 0032.scaffold00124 314585 1 G A - ReadM SNP 0032.scaffold00124 314635 1 A G - ReadM SNP 0032.scaffold00124 314647 1 G A - ReadM SNP 0032.scaffold00124 314655 1 T C - ReadM SNP 0032.scaffold00124 314707 1 T C - ReadM SNP 0032.scaffold00124 314739 1 A G - ReadM SNP 0032.scaffold00124 314765 1 T A - ReadM SNP 0032.scaffold00124 314812 1 G T - ReadM SNP 0032.scaffold00124 314845 1 A C - ReadM SNP 0032.scaffold00124 314889 1 C T - ReadM SNP 0032.scaffold00124 314897 1 A G - ReadM SNP 0032.scaffold00124 314974 1 T G - ReadM SNP 0032.scaffold00124 315049 1 G A - ReadM SNP 0032.scaffold00124 315058 1 C T - ReadM SNP 0032.scaffold00124 315243 1 C A - ReadM SNP 0032.scaffold00124 315255 1 A T - ReadM SNP 0032.scaffold00124 315274 1 A G - ReadM SNP 0032.scaffold00124 315398 1 A G - ReadM SNP 0032.scaffold00124 315411 1 T C - ReadM SNP 0032.scaffold00124 315451 1 G T - ReadM SNP 0032.scaffold00124 315651 1 C T - ReadM INDEL 0032.scaffold00124 315661 1 A . - ReadM SNP 0032.scaffold00124 315722 1 A T - ReadM SNP 0032.scaffold00124 315752 1 C T - ReadM SNP 0032.scaffold00124 315827 1 C T - ReadM SNP 0032.scaffold00124 315831 1 C T - ScafM SNP 0032.scaffold00124 316036 1 C A scaffold10829 ScafM SNP 0032.scaffold00124 316441 1 C T scaffold10829 ReadM SNP 0032.scaffold00124 317274 1 T A - ReadM SNP 0032.scaffold00124 317290 1 T A - ReadM SNP 0032.scaffold00124 317307 1 T A - ReadM SNP 0032.scaffold00124 319675 1 T C - ReadM SNP 0032.scaffold00124 319905 1 T G - ReadM SNP 0032.scaffold00124 320210 1 A C - ReadM SNP 0032.scaffold00124 320260 1 A T - ReadM SNP 0032.scaffold00124 320308 1 A G - ReadM SNP 0032.scaffold00124 320352 1 G C - ReadM SNP 0032.scaffold00124 320413 1 A T - ReadM SNP 0032.scaffold00124 320561 1 C T - ReadM INDEL 0032.scaffold00124 320604 1 T . - ReadM INDEL 0032.scaffold00124 320720 1 T . - ReadM SNP 0032.scaffold00124 320810 1 C G - ReadM SNP 0032.scaffold00124 320951 1 C T - ReadM INDEL 0032.scaffold00124 321265 1 T . - ReadM SNP 0032.scaffold00124 321859 1 G T - ReadM SNP 0032.scaffold00124 325065 1 G A - ReadM SNP 0032.scaffold00124 325095 1 C T - ReadM SNP 0032.scaffold00124 325189 1 T C - ReadM SNP 0032.scaffold00124 325242 1 G A - ReadM SNP 0032.scaffold00124 326250 1 A T - ReadM SNP 0032.scaffold00124 326709 1 A G - ReadM SNP 0032.scaffold00124 326758 1 A G - ReadM SNP 0032.scaffold00124 327576 1 G A - ReadM SNP 0032.scaffold00124 327787 1 T C - ReadM SNP 0032.scaffold00124 327970 1 G A - ReadM SNP 0032.scaffold00124 328213 1 G A - Both SNP 0032.scaffold00124 328269 1 T C scaffold10829 Both SNP 0032.scaffold00124 328275 1 A G scaffold10829 ReadM SNP 0032.scaffold00124 328845 1 C T - ReadM SNP 0032.scaffold00124 328880 1 G T - ScafM SNP 0032.scaffold00124 330387 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 330681 2 AG TA scaffold10829 ScafM SNP 0032.scaffold00124 330727 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 330730 1 C T scaffold10829 ReadM SNP 0032.scaffold00124 331543 1 T C - ReadM INDEL 0032.scaffold00124 331560 2 AA .. - ReadM SNP 0032.scaffold00124 334861 1 T C - ReadM SNP 0032.scaffold00124 334863 1 G A - ReadM SNP 0032.scaffold00124 335104 1 T C - ReadM SNP 0032.scaffold00124 335114 1 G A - ReadM SNP 0032.scaffold00124 335162 1 C T - ReadM SNP 0032.scaffold00124 335262 1 C T - ScafM SNP 0032.scaffold00124 339622 1 A C scaffold12398 ScafM SNP 0032.scaffold00124 339625 1 G A scaffold12398 ScafM SNP 0032.scaffold00124 339636 1 G A scaffold12398 ScafM SNP 0032.scaffold00124 339718 1 C T scaffold12398 ScafM SNP 0032.scaffold00124 339722 1 T G scaffold12398 ScafM SNP 0032.scaffold00124 339799 1 G A scaffold12398 ScafM SNP 0032.scaffold00124 341505 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 341682 1 C T scaffold10829 Both SNP 0032.scaffold00124 341717 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 342033 1 T G scaffold10829 ScafM SNP 0032.scaffold00124 342047 1 C G scaffold10829 ScafM SNP 0032.scaffold00124 342133 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 342244 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 343217 1 C T scaffold10829 ScafM INDEL 0032.scaffold00124 343233 2 AG .. scaffold10829 ScafM SNP 0032.scaffold00124 343269 1 T C scaffold10829 ScafM SNP 0032.scaffold00124 343277 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 343328 1 C T scaffold10829 ScafM INDEL 0032.scaffold00124 343351 4 .... TCCT scaffold10829 ScafM SNP 0032.scaffold00124 343715 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 343801 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 343805 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 343998 1 C G scaffold10829 ScafM SNP 0032.scaffold00124 344007 1 C G scaffold10829 ScafM SNP 0032.scaffold00124 344010 1 G T scaffold10829 ScafM SNP 0032.scaffold00124 344019 1 C T scaffold10829 Both SNP 0032.scaffold00124 344070 1 C G scaffold10829 Both SNP 0032.scaffold00124 344205 1 G A scaffold10829 Both SNP 0032.scaffold00124 344308 1 G C scaffold10829 ScafM SNP 0032.scaffold00124 344333 1 C T scaffold10829 Both SNP 0032.scaffold00124 344344 1 G T scaffold10829 Both SNP 0032.scaffold00124 344349 1 C T scaffold10829 Both SNP 0032.scaffold00124 344371 1 C T scaffold10829 ReadM SNP 0032.scaffold00124 344548 1 T C - ReadM SNP 0032.scaffold00124 344577 1 A G - ReadM SNP 0032.scaffold00124 344683 1 A T - ReadM SNP 0032.scaffold00124 344746 1 G T - Both SNP 0032.scaffold00124 345376 1 C T scaffold10829 Both SNP 0032.scaffold00124 345503 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 345792 2 AA GG scaffold10829 ScafM SNP 0032.scaffold00124 345801 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 345804 1 A G scaffold10829 Both SNP 0032.scaffold00124 345931 1 G A scaffold10829 Both SNP 0032.scaffold00124 346020 1 G A scaffold10829 Both SNP 0032.scaffold00124 346078 1 C T scaffold10829 Both INDEL 0032.scaffold00124 346529 1 . G scaffold10829 Both SNP 0032.scaffold00124 346625 1 G T scaffold10829 Both SNP 0032.scaffold00124 346678 1 A G scaffold10829 Both SNP 0032.scaffold00124 346695 1 C G scaffold10829 Both SNP 0032.scaffold00124 346813 1 G A scaffold10829 ScafM INDEL 0032.scaffold00124 347043 10 .......... CCAAGTCCAA scaffold10829 ReadM SNP 0032.scaffold00124 347044 1 G C - ScafM INDEL 0032.scaffold00124 347044 2 .. TC scaffold10829 Both INDEL 0032.scaffold00124 347220 1 A . scaffold10829 Both SNP 0032.scaffold00124 347300 1 A G scaffold10829 ScafM INDEL 0032.scaffold00124 347465 3 TTT ... scaffold10829 Both SNP 0032.scaffold00124 347666 1 C T scaffold10829 Both SNP 0032.scaffold00124 348091 1 G A scaffold10829 Both SNP 0032.scaffold00124 348153 1 C G scaffold10829 Both SNP 0032.scaffold00124 348420 1 T A scaffold10829 Both SNP 0032.scaffold00124 348461 1 A G scaffold10829 Both SNP 0032.scaffold00124 348789 1 A C scaffold10829 Both SNP 0032.scaffold00124 348805 1 G T scaffold10829 Both SNP 0032.scaffold00124 348844 1 A C scaffold10829 Both SNP 0032.scaffold00124 349018 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 349021 1 A G scaffold10829 ScafM SNP 0032.scaffold00124 349023 1 G T scaffold10829 ScafM INDEL 0032.scaffold00124 349118 2 .. GT scaffold10829 ScafM INDEL 0032.scaffold00124 349119 6 ...... CTCGCC scaffold10829 ReadM INDEL 0032.scaffold00124 349214 1 . A - Both SNP 0032.scaffold00124 349310 1 C A scaffold10829 Both INDEL 0032.scaffold00124 349386 1 A . scaffold10829 Both SNP 0032.scaffold00124 349413 1 T G scaffold10829 Both SNP 0032.scaffold00124 349440 1 A G scaffold10829 Both SNP 0032.scaffold00124 349446 1 T A scaffold10829 ReadM SNP 0032.scaffold00124 349548 1 T G - Both SNP 0032.scaffold00124 349674 1 G A scaffold10829 Both SNP 0032.scaffold00124 349724 1 T G scaffold10829 Both SNP 0032.scaffold00124 349764 1 G A scaffold10829 Both SNP 0032.scaffold00124 349789 1 A T scaffold10829 ScafM SNP 0032.scaffold00124 349885 1 G C scaffold10829 ScafM SNP 0032.scaffold00124 349887 1 A G scaffold10829 Both SNP 0032.scaffold00124 349890 1 G T scaffold10829 ReadM SNP 0032.scaffold00124 349971 1 C A - ReadM SNP 0032.scaffold00124 350123 1 A C - ReadM SNP 0032.scaffold00124 350219 1 T C - ReadM SNP 0032.scaffold00124 350288 1 C T - ReadM SNP 0032.scaffold00124 350316 1 G C - ReadM SNP 0032.scaffold00124 350329 1 G A - ReadM SNP 0032.scaffold00124 350542 1 A G - ReadM SNP 0032.scaffold00124 350729 1 A G - ReadM SNP 0032.scaffold00124 350773 1 T A - ReadM INDEL 0032.scaffold00124 350798 1 . C - ReadM SNP 0032.scaffold00124 350837 1 A G - ReadM SNP 0032.scaffold00124 350895 1 G A - ReadM SNP 0032.scaffold00124 350919 1 A G - ReadM SNP 0032.scaffold00124 351055 1 T C - ScafM SNP 0032.scaffold00124 351295 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 351297 1 C G scaffold10829 ScafM SNP 0032.scaffold00124 351408 1 G A scaffold10829 ScafM SNP 0032.scaffold00124 351427 1 C T scaffold10829 ScafM SNP 0032.scaffold00124 351442 1 T A scaffold10829 ScafM INDEL 0032.scaffold00124 351503 1 . A scaffold10829 ReadM SNP 0032.scaffold00124 352595 1 A G - ReadM SNP 0032.scaffold00124 352783 1 C T - ReadM INDEL 0032.scaffold00124 352815 1 . A - ReadM SNP 0032.scaffold00124 352938 1 A G - ReadM SNP 0032.scaffold00124 352959 1 G T - ReadM SNP 0032.scaffold00124 353059 1 G T - ReadM SNP 0032.scaffold00124 353316 1 T C - ReadM SNP 0032.scaffold00124 353363 1 C T - ReadM SNP 0032.scaffold00124 353453 1 C T - ReadM SNP 0032.scaffold00124 353950 1 T G - ReadM SNP 0032.scaffold00124 354007 1 A G - ReadM SNP 0032.scaffold00124 354333 1 C T - ReadM SNP 0032.scaffold00124 354346 1 T G - Both SNP 0032.scaffold00124 354471 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 354501 1 C T scaffold12605 ScafM INDEL 0032.scaffold00124 354503 1 T . scaffold12605 ScafM SNP 0032.scaffold00124 354521 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 354555 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 354578 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 354613 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 354652 1 A C scaffold12605 ScafM SNP 0032.scaffold00124 354699 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 354709 1 A T scaffold12605 ScafM SNP 0032.scaffold00124 354762 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 354869 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 354874 1 A G scaffold12605 ScafM INDEL 0032.scaffold00124 354886 1 T . scaffold12605 ScafM SNP 0032.scaffold00124 354994 1 C A scaffold12605 ScafM SNP 0032.scaffold00124 354998 1 A T scaffold12605 ScafM INDEL 0032.scaffold00124 355028 3 ... TAT scaffold12605 ScafM INDEL 0032.scaffold00124 355117 1 A . scaffold12605 ScafM SNP 0032.scaffold00124 355144 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 355150 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 355153 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 355158 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 355243 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 355245 1 A C scaffold12605 ScafM SNP 0032.scaffold00124 355249 1 A G scaffold12605 ReadM SNP 0032.scaffold00124 355284 1 C T - ReadM SNP 0032.scaffold00124 355360 1 G A - ReadM SNP 0032.scaffold00124 355366 1 G A - ReadM SNP 0032.scaffold00124 355501 1 C T - ReadM SNP 0032.scaffold00124 355583 1 T A - ReadM SNP 0032.scaffold00124 355602 1 G T - ReadM SNP 0032.scaffold00124 355703 1 G A - ReadM SNP 0032.scaffold00124 355750 1 C T - ReadM SNP 0032.scaffold00124 355790 1 T A - ReadM SNP 0032.scaffold00124 355813 1 A T - ReadM SNP 0032.scaffold00124 355833 1 T A - ReadM SNP 0032.scaffold00124 355851 1 G A - ReadM SNP 0032.scaffold00124 355910 1 C T - ReadM SNP 0032.scaffold00124 356076 1 A T - ReadM SNP 0032.scaffold00124 356082 1 C T - ReadM SNP 0032.scaffold00124 356110 1 T C - ReadM SNP 0032.scaffold00124 356155 1 T A - ReadM SNP 0032.scaffold00124 356163 1 T C - ReadM SNP 0032.scaffold00124 356277 1 T C - ReadM SNP 0032.scaffold00124 356340 1 A T - ReadM SNP 0032.scaffold00124 356359 1 T C - ReadM INDEL 0032.scaffold00124 356483 1 . A - ReadM SNP 0032.scaffold00124 356486 1 C G - ReadM SNP 0032.scaffold00124 356488 1 C T - ReadM SNP 0032.scaffold00124 356571 1 C T - ReadM SNP 0032.scaffold00124 356587 1 T C - ReadM SNP 0032.scaffold00124 356619 1 T C - ReadM SNP 0032.scaffold00124 356726 1 G A - ReadM SNP 0032.scaffold00124 356756 1 C T - ReadM SNP 0032.scaffold00124 356813 1 A G - ReadM SNP 0032.scaffold00124 357024 1 C A - ReadM SNP 0032.scaffold00124 357103 1 T C - ReadM SNP 0032.scaffold00124 357111 1 G C - ReadM SNP 0032.scaffold00124 357194 1 G A - ReadM SNP 0032.scaffold00124 357215 1 T C - ReadM SNP 0032.scaffold00124 357243 1 T C - ReadM SNP 0032.scaffold00124 357298 1 C T - ReadM SNP 0032.scaffold00124 357307 1 T C - ReadM SNP 0032.scaffold00124 357324 1 G A - ReadM INDEL 0032.scaffold00124 357395 2 .. AG - ReadM SNP 0032.scaffold00124 357516 1 A T - ReadM SNP 0032.scaffold00124 357614 1 C T - ReadM SNP 0032.scaffold00124 357633 1 T C - ReadM SNP 0032.scaffold00124 357640 1 A T - ReadM SNP 0032.scaffold00124 357656 1 C T - ReadM SNP 0032.scaffold00124 357705 1 T C - ReadM SNP 0032.scaffold00124 357832 1 T C - ReadM SNP 0032.scaffold00124 357928 1 C T - ReadM SNP 0032.scaffold00124 358023 1 C T - ReadM SNP 0032.scaffold00124 358078 1 A C - ReadM SNP 0032.scaffold00124 358118 1 C T - ReadM SNP 0032.scaffold00124 358136 1 A G - ReadM SNP 0032.scaffold00124 358195 1 T A - ReadM SNP 0032.scaffold00124 358239 1 G A - ReadM SNP 0032.scaffold00124 358282 1 T C - ReadM SNP 0032.scaffold00124 358313 1 T G - ReadM SNP 0032.scaffold00124 358363 1 A G - ReadM SNP 0032.scaffold00124 358448 1 A T - ReadM SNP 0032.scaffold00124 358458 1 T A - ReadM SNP 0032.scaffold00124 358521 1 G T - ReadM SNP 0032.scaffold00124 358679 1 G A - ReadM SNP 0032.scaffold00124 358703 1 G A - ReadM SNP 0032.scaffold00124 358729 1 C G - ReadM SNP 0032.scaffold00124 358747 1 T A - ReadM SNP 0032.scaffold00124 358833 1 G A - ReadM SNP 0032.scaffold00124 358909 1 A T - ReadM SNP 0032.scaffold00124 359058 1 G T - ReadM SNP 0032.scaffold00124 359143 1 C T - ReadM SNP 0032.scaffold00124 359326 1 C T - ReadM SNP 0032.scaffold00124 359378 1 T G - ReadM SNP 0032.scaffold00124 359390 1 C G - ReadM SNP 0032.scaffold00124 359447 1 T G - ReadM SNP 0032.scaffold00124 359481 1 C G - ReadM SNP 0032.scaffold00124 359515 1 A C - ReadM SNP 0032.scaffold00124 359526 1 G A - ReadM SNP 0032.scaffold00124 359612 1 C T - ReadM SNP 0032.scaffold00124 359629 1 G A - ReadM SNP 0032.scaffold00124 359649 1 T C - ReadM SNP 0032.scaffold00124 359687 1 C A - ReadM SNP 0032.scaffold00124 359796 1 T C - ReadM SNP 0032.scaffold00124 359826 1 C A - ReadM SNP 0032.scaffold00124 359836 1 A T - ReadM SNP 0032.scaffold00124 359870 1 G A - ReadM SNP 0032.scaffold00124 359982 1 A T - ReadM SNP 0032.scaffold00124 360047 1 C G - ReadM SNP 0032.scaffold00124 360069 1 A G - ReadM SNP 0032.scaffold00124 360156 1 G A - ReadM SNP 0032.scaffold00124 360281 1 G C - ReadM SNP 0032.scaffold00124 360293 1 A T - ReadM SNP 0032.scaffold00124 360333 1 G T - ReadM SNP 0032.scaffold00124 360357 1 A G - ReadM SNP 0032.scaffold00124 360394 1 T C - ReadM SNP 0032.scaffold00124 360469 1 T C - ReadM SNP 0032.scaffold00124 360494 1 A G - ReadM SNP 0032.scaffold00124 360527 1 C A - ReadM SNP 0032.scaffold00124 360530 1 C G - ReadM SNP 0032.scaffold00124 360569 1 T C - ReadM SNP 0032.scaffold00124 360607 1 G T - ReadM SNP 0032.scaffold00124 360630 1 C T - ReadM SNP 0032.scaffold00124 360685 1 C A - ReadM SNP 0032.scaffold00124 360716 1 T C - ReadM SNP 0032.scaffold00124 360798 1 A C - ReadM SNP 0032.scaffold00124 360837 1 C T - ReadM SNP 0032.scaffold00124 360867 1 G A - ReadM SNP 0032.scaffold00124 360916 1 C A - ReadM SNP 0032.scaffold00124 360929 1 A G - ReadM SNP 0032.scaffold00124 361005 1 A G - ReadM SNP 0032.scaffold00124 361010 1 G T - ReadM SNP 0032.scaffold00124 361041 1 T G - ReadM SNP 0032.scaffold00124 361101 1 G C - ReadM SNP 0032.scaffold00124 361105 1 A C - ReadM SNP 0032.scaffold00124 361108 1 C T - ReadM INDEL 0032.scaffold00124 361279 1 . G - ReadM SNP 0032.scaffold00124 361363 1 C T - ReadM SNP 0032.scaffold00124 361395 1 C T - ReadM SNP 0032.scaffold00124 361449 1 T A - ReadM SNP 0032.scaffold00124 361459 1 A T - ReadM SNP 0032.scaffold00124 361490 1 G T - ReadM SNP 0032.scaffold00124 361497 1 T C - ReadM SNP 0032.scaffold00124 361598 1 T C - ReadM SNP 0032.scaffold00124 361715 1 C T - ReadM SNP 0032.scaffold00124 361751 1 T G - ReadM SNP 0032.scaffold00124 361847 1 A C - ReadM SNP 0032.scaffold00124 361858 1 G A - ReadM SNP 0032.scaffold00124 361928 1 A G - ReadM SNP 0032.scaffold00124 362003 1 A G - ReadM SNP 0032.scaffold00124 362062 1 A G - ReadM SNP 0032.scaffold00124 362141 1 G A - ReadM SNP 0032.scaffold00124 362200 1 C T - ReadM SNP 0032.scaffold00124 362368 1 T C - ReadM SNP 0032.scaffold00124 362441 1 A T - ReadM SNP 0032.scaffold00124 362450 1 A C - ReadM SNP 0032.scaffold00124 362519 1 T C - ReadM SNP 0032.scaffold00124 362562 1 T G - ReadM SNP 0032.scaffold00124 362575 1 C G - ReadM SNP 0032.scaffold00124 362738 1 G A - ReadM SNP 0032.scaffold00124 362750 1 T C - ReadM SNP 0032.scaffold00124 362804 1 C T - ReadM SNP 0032.scaffold00124 362870 1 G C - ReadM SNP 0032.scaffold00124 362991 1 G A - ReadM INDEL 0032.scaffold00124 362994 1 . T - ReadM SNP 0032.scaffold00124 363040 1 C T - ReadM SNP 0032.scaffold00124 363112 1 A G - ReadM SNP 0032.scaffold00124 363189 1 T G - ReadM SNP 0032.scaffold00124 363255 1 C T - ReadM SNP 0032.scaffold00124 363360 1 C T - ReadM SNP 0032.scaffold00124 363393 1 C T - ReadM SNP 0032.scaffold00124 363569 1 C T - Both SNP 0032.scaffold00124 363697 1 A G scaffold12605 Both SNP 0032.scaffold00124 363715 1 G T scaffold12605 Both SNP 0032.scaffold00124 363717 1 G T scaffold12605 Both SNP 0032.scaffold00124 363760 1 T C scaffold12605 Both SNP 0032.scaffold00124 363797 1 G A scaffold12605 Both SNP 0032.scaffold00124 363807 1 C T scaffold12605 ReadM SNP 0032.scaffold00124 364011 1 C T - ReadM SNP 0032.scaffold00124 364024 1 C T - ReadM SNP 0032.scaffold00124 364087 1 T C - ReadM SNP 0032.scaffold00124 364093 1 C T - ReadM SNP 0032.scaffold00124 364194 1 C T - ReadM SNP 0032.scaffold00124 364209 1 C G - ScafM SNP 0032.scaffold00124 365008 1 T C scaffold12605 ReadM SNP 0032.scaffold00124 365329 1 A T - ReadM SNP 0032.scaffold00124 365397 1 G T - ReadM SNP 0032.scaffold00124 365447 1 A G - ReadM INDEL 0032.scaffold00124 365749 1 T . - ReadM SNP 0032.scaffold00124 365793 1 C T - ReadM SNP 0032.scaffold00124 365813 1 G A - ReadM SNP 0032.scaffold00124 365933 1 C G - ReadM SNP 0032.scaffold00124 365988 1 T G - ReadM SNP 0032.scaffold00124 366011 1 T C - ReadM SNP 0032.scaffold00124 366044 1 G A - ReadM SNP 0032.scaffold00124 366046 1 C T - ReadM SNP 0032.scaffold00124 366221 1 G A - Both SNP 0032.scaffold00124 366330 1 A C scaffold12605 Both SNP 0032.scaffold00124 366334 1 G A scaffold12605 Both SNP 0032.scaffold00124 366345 1 A T scaffold12605 Both SNP 0032.scaffold00124 366459 1 C T scaffold12605 ReadM INDEL 0032.scaffold00124 366617 2 .. AC - ReadM SNP 0032.scaffold00124 366731 1 G A - ReadM SNP 0032.scaffold00124 366793 1 G T - ReadM SNP 0032.scaffold00124 366803 1 C A - ReadM SNP 0032.scaffold00124 366837 1 T A - ReadM SNP 0032.scaffold00124 366889 1 G A - ReadM SNP 0032.scaffold00124 367265 1 A C - ReadM SNP 0032.scaffold00124 367333 1 T C - ReadM SNP 0032.scaffold00124 367421 1 T A - ReadM SNP 0032.scaffold00124 367736 1 C G - ReadM SNP 0032.scaffold00124 367758 1 C A - ReadM SNP 0032.scaffold00124 367808 1 C T - ReadM INDEL 0032.scaffold00124 367925 1 A . - ReadM INDEL 0032.scaffold00124 367950 1 . T - ReadM SNP 0032.scaffold00124 367984 1 C T - ReadM SNP 0032.scaffold00124 368116 1 C T - ReadM SNP 0032.scaffold00124 368143 1 C A - ReadM SNP 0032.scaffold00124 368194 1 C A - ReadM SNP 0032.scaffold00124 368285 1 T C - ReadM SNP 0032.scaffold00124 368300 1 G A - ReadM SNP 0032.scaffold00124 368368 1 T C - ReadM SNP 0032.scaffold00124 368483 1 T C - ReadM SNP 0032.scaffold00124 368506 1 C T - ReadM SNP 0032.scaffold00124 368511 1 C T - ReadM SNP 0032.scaffold00124 368557 1 T A - ReadM SNP 0032.scaffold00124 368560 1 T C - ReadM SNP 0032.scaffold00124 368572 1 A C - ReadM SNP 0032.scaffold00124 368645 1 T C - ReadM SNP 0032.scaffold00124 368665 1 C T - ReadM SNP 0032.scaffold00124 368722 1 C A - ReadM INDEL 0032.scaffold00124 368770 3 ... AAG - Both SNP 0032.scaffold00124 369034 1 T G scaffold12605 Both SNP 0032.scaffold00124 369139 1 C T scaffold12605 Both SNP 0032.scaffold00124 369181 1 G C scaffold12605 Both SNP 0032.scaffold00124 369235 1 C T scaffold12605 Both SNP 0032.scaffold00124 369349 1 G A scaffold12605 Both SNP 0032.scaffold00124 369375 1 C A scaffold12605 Both SNP 0032.scaffold00124 369385 1 G A scaffold12605 ScafM INDEL 0032.scaffold00124 369443 21 ..................... ATAACTGATATTTATACTTAC scaffold12605 Both SNP 0032.scaffold00124 369449 1 C A scaffold12605 ScafM SNP 0032.scaffold00124 369646 1 G C scaffold12605 Both SNP 0032.scaffold00124 369816 1 G A scaffold12605 Both SNP 0032.scaffold00124 369919 1 A G scaffold12605 Both SNP 0032.scaffold00124 369988 1 G A scaffold12605 Both SNP 0032.scaffold00124 369993 1 G A scaffold12605 Both SNP 0032.scaffold00124 370097 1 C T scaffold12605 Both SNP 0032.scaffold00124 370113 1 G A scaffold12605 Both SNP 0032.scaffold00124 370145 1 C T scaffold12605 Both SNP 0032.scaffold00124 370235 1 G A scaffold12605 Both SNP 0032.scaffold00124 370344 1 C A scaffold12605 Both SNP 0032.scaffold00124 370402 1 A C scaffold12605 Both SNP 0032.scaffold00124 370480 1 G C scaffold12605 Both SNP 0032.scaffold00124 370504 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 370533 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 370570 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 370614 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 370626 1 G A scaffold12605 ScafM INDEL 0032.scaffold00124 370651 33 ................................. TATCAGGTGGAGTGTATATGTTATACTATATTT scaffold12605 ScafM INDEL 0032.scaffold00124 370698 6 ...... ATGATG scaffold12605 ScafM SNP 0032.scaffold00124 370754 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 370783 1 C G scaffold12605 ScafM SNP 0032.scaffold00124 370858 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 372305 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 372330 1 A C scaffold12605 ScafM INDEL 0032.scaffold00124 372338 2 TT .. scaffold12605 ScafM SNP 0032.scaffold00124 372347 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 372353 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 372927 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 372970 2 AT GA scaffold12605 ScafM INDEL 0032.scaffold00124 373007 1 A . scaffold12605 ScafM SNP 0032.scaffold00124 373013 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 374299 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 374323 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 374326 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 374375 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 374421 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 374465 1 C A scaffold12605 ScafM SNP 0032.scaffold00124 374482 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 374508 1 C T scaffold12605 ScafM INDEL 0032.scaffold00124 374555 9 ......... ATTTATTAT scaffold12605 Both SNP 0032.scaffold00124 374795 1 T G scaffold12605 Both SNP 0032.scaffold00124 374846 1 A G scaffold12605 Both SNP 0032.scaffold00124 374913 1 G A scaffold12605 Both SNP 0032.scaffold00124 374932 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 374947 1 T C scaffold12605 Both SNP 0032.scaffold00124 374988 1 A G scaffold12605 Both SNP 0032.scaffold00124 375000 1 T G scaffold12605 Both SNP 0032.scaffold00124 375077 1 T C scaffold12605 Both SNP 0032.scaffold00124 375079 1 G A scaffold12605 Both SNP 0032.scaffold00124 375110 1 A G scaffold12605 Both SNP 0032.scaffold00124 375169 1 A G scaffold12605 Both SNP 0032.scaffold00124 375204 1 G T scaffold12605 Both SNP 0032.scaffold00124 375302 1 G T scaffold12605 Both SNP 0032.scaffold00124 375339 1 G A scaffold12605 Both SNP 0032.scaffold00124 375376 1 T G scaffold12605 Both SNP 0032.scaffold00124 375500 1 C T scaffold12605 Both SNP 0032.scaffold00124 375586 1 G A scaffold12605 Both SNP 0032.scaffold00124 375588 1 C G scaffold12605 ScafM SNP 0032.scaffold00124 375635 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 375637 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 375670 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 375677 1 C G scaffold12605 Both SNP 0032.scaffold00124 375747 1 T A scaffold12605 Both SNP 0032.scaffold00124 375869 1 T C scaffold12605 Both SNP 0032.scaffold00124 375896 1 G A scaffold12605 Both INDEL 0032.scaffold00124 375906 1 . T scaffold12605 Both SNP 0032.scaffold00124 375929 1 C T scaffold12605 Both SNP 0032.scaffold00124 375960 1 C A scaffold12605 Both SNP 0032.scaffold00124 376032 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 376071 1 G T scaffold12605 ScafM INDEL 0032.scaffold00124 376079 4 TATA .... scaffold12605 Both INDEL 0032.scaffold00124 376175 1 . G scaffold12605 Both SNP 0032.scaffold00124 376304 1 A G scaffold12605 Both SNP 0032.scaffold00124 376319 1 C T scaffold12605 Both SNP 0032.scaffold00124 376354 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 376408 1 G C scaffold12605 Both SNP 0032.scaffold00124 376467 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 376512 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 376541 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 376549 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 376633 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 376714 1 C G scaffold12605 ScafM SNP 0032.scaffold00124 376759 1 A T scaffold12605 Both SNP 0032.scaffold00124 376776 1 A G scaffold12605 ReadM SNP 0032.scaffold00124 376805 1 G A - Both SNP 0032.scaffold00124 377026 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 377042 1 C T scaffold12605 ScafM INDEL 0032.scaffold00124 377122 27 TGCTATTTTTCACGTCCAAGACCTGCC ........................... scaffold12605 ScafM SNP 0032.scaffold00124 377252 1 A G scaffold12605 Both SNP 0032.scaffold00124 377382 1 T C scaffold12605 Both SNP 0032.scaffold00124 377441 1 C G scaffold12605 Both SNP 0032.scaffold00124 377459 1 T C scaffold12605 Both SNP 0032.scaffold00124 377504 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 377669 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 377672 1 A C scaffold12605 ScafM SNP 0032.scaffold00124 377674 1 C G scaffold12605 ScafM SNP 0032.scaffold00124 377681 1 A C scaffold12605 ScafM INDEL 0032.scaffold00124 377718 1 G . scaffold12605 ScafM SNP 0032.scaffold00124 377721 2 GG AA scaffold12605 ScafM SNP 0032.scaffold00124 377735 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 377737 1 C A scaffold12605 Both INDEL 0032.scaffold00124 377807 1 . C scaffold12605 Both SNP 0032.scaffold00124 377881 1 G A scaffold12605 Both SNP 0032.scaffold00124 377979 1 C A scaffold12605 Both SNP 0032.scaffold00124 378009 1 T A scaffold12605 Both SNP 0032.scaffold00124 378276 1 T C scaffold12605 ScafM INDEL 0032.scaffold00124 378289 3 ... CTA scaffold12605 Both SNP 0032.scaffold00124 378527 1 G A scaffold12605 Both SNP 0032.scaffold00124 378531 1 T C scaffold12605 Both SNP 0032.scaffold00124 378534 1 T A scaffold12605 Both SNP 0032.scaffold00124 378596 1 T C scaffold12605 Both SNP 0032.scaffold00124 378733 1 G A scaffold12605 Both SNP 0032.scaffold00124 378837 1 C T scaffold12605 Both SNP 0032.scaffold00124 378928 1 G C scaffold12605 Both SNP 0032.scaffold00124 378953 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 378992 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 379001 1 A T scaffold12605 Both SNP 0032.scaffold00124 379026 1 C A scaffold12605 Both SNP 0032.scaffold00124 379032 1 C A scaffold12605 Both SNP 0032.scaffold00124 379092 1 T C scaffold12605 ReadM SNP 0032.scaffold00124 379146 1 T G - ReadM SNP 0032.scaffold00124 379189 1 C T - ReadM SNP 0032.scaffold00124 379225 1 A G - Both SNP 0032.scaffold00124 379271 1 C T scaffold12605 Both SNP 0032.scaffold00124 379319 1 C T scaffold12605 Both SNP 0032.scaffold00124 379343 1 G T scaffold12605 ReadM SNP 0032.scaffold00124 379382 1 A T - ReadM SNP 0032.scaffold00124 379446 1 G A - ReadM SNP 0032.scaffold00124 379457 1 C A - ReadM SNP 0032.scaffold00124 379468 1 A G - ReadM SNP 0032.scaffold00124 379518 1 G T - ReadM SNP 0032.scaffold00124 379575 1 G T - ReadM SNP 0032.scaffold00124 379665 1 C T - ReadM SNP 0032.scaffold00124 379673 1 T C - ReadM SNP 0032.scaffold00124 379935 1 T C - ReadM SNP 0032.scaffold00124 379940 1 T A - ReadM SNP 0032.scaffold00124 379950 1 A T - ScafM SNP 0032.scaffold00124 380044 1 T A scaffold12605 ScafM SNP 0032.scaffold00124 380068 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 380071 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 380079 1 T C scaffold12605 Both SNP 0032.scaffold00124 380099 1 G T scaffold12605 Both SNP 0032.scaffold00124 380131 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 380194 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 380205 1 T A scaffold12605 ScafM SNP 0032.scaffold00124 380216 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 380254 2 CC AT scaffold12605 ScafM SNP 0032.scaffold00124 380258 1 T A scaffold12605 Both SNP 0032.scaffold00124 380281 1 A G scaffold12605 Both SNP 0032.scaffold00124 380354 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 380402 1 A C scaffold12605 ScafM INDEL 0032.scaffold00124 380412 4 TAAT .... scaffold12605 ScafM SNP 0032.scaffold00124 380426 1 T A scaffold12605 Both SNP 0032.scaffold00124 380604 1 C T scaffold12605 Both SNP 0032.scaffold00124 380606 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 380641 1 C A scaffold12605 ScafM SNP 0032.scaffold00124 380653 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 380662 1 T A scaffold12605 ScafM SNP 0032.scaffold00124 380672 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 380696 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 380709 1 T C scaffold12605 Both SNP 0032.scaffold00124 380733 1 A G scaffold12605 Both SNP 0032.scaffold00124 380749 1 G A scaffold12605 Both SNP 0032.scaffold00124 380803 1 G A scaffold12605 ReadM SNP 0032.scaffold00124 380837 1 C G - ReadM SNP 0032.scaffold00124 380973 1 C G - ReadM SNP 0032.scaffold00124 381016 1 G C - ScafM SNP 0032.scaffold00124 381585 1 A G scaffold12605 ScafM INDEL 0032.scaffold00124 381766 2 .. AT scaffold12605 ScafM INDEL 0032.scaffold00124 382741 1 . A scaffold12605 ScafM SNP 0032.scaffold00124 382748 1 G A scaffold12605 Both SNP 0032.scaffold00124 382786 1 T A scaffold12605 Both SNP 0032.scaffold00124 382811 1 T G scaffold12605 ScafM SNP 0032.scaffold00124 382868 2 AA GT scaffold12605 ScafM SNP 0032.scaffold00124 382876 1 A G scaffold12605 ScafM SNP 0032.scaffold00124 382977 1 A C scaffold12605 ScafM SNP 0032.scaffold00124 383062 1 C G scaffold12605 ScafM SNP 0032.scaffold00124 383221 1 A T scaffold12605 ScafM SNP 0032.scaffold00124 383240 1 T A scaffold12605 ScafM INDEL 0032.scaffold00124 383270 2 CT .. scaffold12605 ReadM SNP 0032.scaffold00124 385919 1 G T - ReadM SNP 0032.scaffold00124 385982 1 A G - ReadM SNP 0032.scaffold00124 386024 1 A G - ReadM SNP 0032.scaffold00124 386033 1 G T - ReadM SNP 0032.scaffold00124 386120 1 T G - ReadM SNP 0032.scaffold00124 386394 1 C T - ReadM SNP 0032.scaffold00124 386489 1 T A - ReadM SNP 0032.scaffold00124 386589 1 T G - ScafM SNP 0032.scaffold00124 386894 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 386896 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 386899 2 GT CG scaffold14709 ScafM SNP 0032.scaffold00124 386903 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 386909 1 A C scaffold14709 ScafM SNP 0032.scaffold00124 386917 2 AA TG scaffold14709 ScafM SNP 0032.scaffold00124 386921 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 386923 1 T C scaffold14709 ScafM SNP 0032.scaffold00124 386930 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 386933 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 386939 1 C A scaffold14709 ScafM SNP 0032.scaffold00124 386954 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 386960 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 386972 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 386974 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 386976 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 386978 2 GT AC scaffold14709 ScafM SNP 0032.scaffold00124 386981 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 386989 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 386992 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 386995 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 386999 1 T G scaffold14709 ScafM SNP 0032.scaffold00124 387008 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387011 1 T G scaffold14709 ScafM SNP 0032.scaffold00124 387014 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387021 1 G C scaffold14709 ScafM SNP 0032.scaffold00124 387035 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387046 2 GT CA scaffold14709 ScafM SNP 0032.scaffold00124 387053 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387059 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387067 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387071 2 GG TT scaffold14709 ScafM SNP 0032.scaffold00124 387076 1 C G scaffold14709 ScafM INDEL 0032.scaffold00124 387088 1 A . scaffold14709 ScafM INDEL 0032.scaffold00124 387092 1 . T scaffold14709 ScafM SNP 0032.scaffold00124 387095 1 T G scaffold14709 ScafM SNP 0032.scaffold00124 387097 2 GG AA scaffold14709 ScafM SNP 0032.scaffold00124 387108 1 C A scaffold14709 ScafM SNP 0032.scaffold00124 387114 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387116 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 387119 2 TT CG scaffold14709 ScafM SNP 0032.scaffold00124 387125 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 387128 3 GTG AGA scaffold14709 ScafM SNP 0032.scaffold00124 387132 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387136 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387140 2 GA TG scaffold14709 ScafM SNP 0032.scaffold00124 387143 1 A T scaffold14709 ScafM SNP 0032.scaffold00124 387149 1 A C scaffold14709 ScafM SNP 0032.scaffold00124 387158 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387161 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387164 1 T C scaffold14709 ScafM SNP 0032.scaffold00124 387174 2 GA AT scaffold14709 ScafM SNP 0032.scaffold00124 387181 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387203 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387209 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387214 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387217 3 TAG GCT scaffold14709 ScafM SNP 0032.scaffold00124 387221 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387225 2 GA TG scaffold14709 ScafM SNP 0032.scaffold00124 387233 1 A T scaffold14709 ScafM SNP 0032.scaffold00124 387237 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387239 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 387242 1 C T scaffold14709 ScafM SNP 0032.scaffold00124 387245 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387257 1 T C scaffold14709 ScafM SNP 0032.scaffold00124 387261 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387263 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387271 2 GG AC scaffold14709 ScafM SNP 0032.scaffold00124 387281 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387290 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387758 2 GG CT scaffold14709 ScafM SNP 0032.scaffold00124 387769 2 AT GC scaffold14709 ScafM SNP 0032.scaffold00124 387773 1 T G scaffold14709 ScafM SNP 0032.scaffold00124 387776 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 387779 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 387794 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387797 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387800 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387803 1 T C scaffold14709 ScafM SNP 0032.scaffold00124 387809 1 T G scaffold14709 ScafM SNP 0032.scaffold00124 387821 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387830 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387836 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387848 1 A G scaffold14709 ScafM SNP 0032.scaffold00124 387860 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387869 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387873 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387881 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 387887 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387893 1 G T scaffold14709 ScafM SNP 0032.scaffold00124 387914 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387922 2 TA GT scaffold14709 ScafM INDEL 0032.scaffold00124 387926 1 C . scaffold14709 ScafM SNP 0032.scaffold00124 387934 1 G C scaffold14709 ScafM SNP 0032.scaffold00124 387941 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387944 1 C G scaffold14709 ScafM SNP 0032.scaffold00124 387955 1 T A scaffold14709 ScafM SNP 0032.scaffold00124 387961 1 G A scaffold14709 ScafM SNP 0032.scaffold00124 387975 1 T C scaffold14709 ScafM SNP 0032.scaffold00124 387978 2 GG TA scaffold14709 ScafM INDEL 0032.scaffold00124 387983 1 A . scaffold14709 ScafM INDEL 0032.scaffold00124 387985 1 A . scaffold14709 ScafM SNP 0032.scaffold00124 387987 1 A G scaffold14709 ScafM INDEL 0032.scaffold00124 387991 2 AC .G scaffold14709 ScafM INDEL 0032.scaffold00124 388004 2 .. TG scaffold14709 ScafM SNP 0032.scaffold00124 388009 1 G A scaffold14709 ScafM INDEL 0032.scaffold00124 388010 1 . G scaffold14709 ReadM SNP 0032.scaffold00124 389068 1 T G - ReadM SNP 0032.scaffold00124 389092 1 C T - ReadM SNP 0032.scaffold00124 389131 1 A G - ScafM SNP 0032.scaffold00124 389172 1 A C scaffold12605 ScafM SNP 0032.scaffold00124 389183 1 C T scaffold12605 ScafM SNP 0032.scaffold00124 389190 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 389195 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 389197 1 C A scaffold12605 ScafM SNP 0032.scaffold00124 389216 1 T C scaffold12605 ScafM SNP 0032.scaffold00124 389218 1 T C scaffold12605 Both SNP 0032.scaffold00124 389265 1 T C scaffold12605 Both SNP 0032.scaffold00124 389295 1 T C scaffold12605 Both SNP 0032.scaffold00124 389315 1 C T scaffold12605 Both SNP 0032.scaffold00124 389339 1 T C scaffold12605 Both SNP 0032.scaffold00124 389346 1 T C scaffold12605 Both SNP 0032.scaffold00124 389555 1 G A scaffold12605 Both SNP 0032.scaffold00124 389584 1 G A scaffold12605 Both SNP 0032.scaffold00124 389730 1 C A scaffold12605 Both SNP 0032.scaffold00124 389746 1 A G scaffold12605 Both INDEL 0032.scaffold00124 389770 1 . G scaffold12605 ReadM SNP 0032.scaffold00124 389810 1 A G - ReadM INDEL 0032.scaffold00124 389850 2 TC .. - ReadM SNP 0032.scaffold00124 389909 1 C T - ReadM SNP 0032.scaffold00124 390020 1 A T - ReadM SNP 0032.scaffold00124 390092 1 A G - ReadM SNP 0032.scaffold00124 390378 1 C T - ReadM SNP 0032.scaffold00124 390382 1 A G - ReadM SNP 0032.scaffold00124 390411 1 G A - ReadM SNP 0032.scaffold00124 390558 1 G A - ReadM SNP 0032.scaffold00124 390661 1 A C - ReadM SNP 0032.scaffold00124 390734 1 C T - ReadM SNP 0032.scaffold00124 390882 1 T G - ReadM SNP 0032.scaffold00124 390963 1 T C - ReadM SNP 0032.scaffold00124 390985 1 C A - ReadM INDEL 0032.scaffold00124 390991 1 G . - ReadM SNP 0032.scaffold00124 390998 1 T C - ReadM SNP 0032.scaffold00124 391171 1 C T - ReadM INDEL 0032.scaffold00124 391178 2 AT .. - ReadM SNP 0032.scaffold00124 391228 1 C A - ReadM SNP 0032.scaffold00124 391252 1 G C - ReadM INDEL 0032.scaffold00124 391269 1 . T - ReadM SNP 0032.scaffold00124 391340 1 A G - ReadM SNP 0032.scaffold00124 391374 1 T C - ReadM SNP 0032.scaffold00124 391411 1 T C - ReadM SNP 0032.scaffold00124 391471 1 C T - ReadM SNP 0032.scaffold00124 391919 1 C T - ReadM SNP 0032.scaffold00124 392056 1 A G - ReadM SNP 0032.scaffold00124 392107 1 C T - ReadM SNP 0032.scaffold00124 392142 1 C T - ReadM SNP 0032.scaffold00124 392212 1 A T - ReadM SNP 0032.scaffold00124 392218 1 A C - ReadM SNP 0032.scaffold00124 392386 1 G A - ReadM SNP 0032.scaffold00124 392399 1 T A - ReadM SNP 0032.scaffold00124 392438 1 T C - ReadM SNP 0032.scaffold00124 392467 1 T A - ReadM SNP 0032.scaffold00124 392539 1 C G - ReadM SNP 0032.scaffold00124 392544 1 A G - ReadM SNP 0032.scaffold00124 392604 1 C T - ReadM SNP 0032.scaffold00124 392646 1 G A - ScafM SNP 0032.scaffold00124 392681 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 392688 1 A G scaffold12605 Both SNP 0032.scaffold00124 392708 1 T C scaffold12605 Both SNP 0032.scaffold00124 392900 1 A T scaffold12605 Both SNP 0032.scaffold00124 392946 1 C T scaffold12605 Both SNP 0032.scaffold00124 392962 1 G C scaffold12605 Both SNP 0032.scaffold00124 392995 1 A G scaffold12605 ReadM SNP 0032.scaffold00124 393188 1 G A - ReadM INDEL 0032.scaffold00124 393318 1 . T - Both SNP 0032.scaffold00124 393335 1 A G scaffold12605 Both SNP 0032.scaffold00124 393383 1 G A scaffold12605 ScafM SNP 0032.scaffold00124 393451 1 T A scaffold12605 ScafM SNP 0032.scaffold00124 393474 1 G T scaffold12605 ScafM SNP 0032.scaffold00124 393476 1 T A scaffold12605 ScafM SNP 0032.scaffold00124 393482 1 G C scaffold12605 ScafM SNP 0032.scaffold00124 393503 1 A G scaffold12605 ReadM SNP 0032.scaffold00124 393728 1 A G - ReadM SNP 0032.scaffold00124 393757 1 C T - ReadM SNP 0032.scaffold00124 393829 1 C T - ReadM SNP 0032.scaffold00124 393969 1 A T - ReadM SNP 0032.scaffold00124 394072 1 T C - ReadM INDEL 0032.scaffold00124 394302 1 T . - ReadM SNP 0032.scaffold00124 394352 1 C T - ReadM SNP 0032.scaffold00124 394363 1 T A - ReadM SNP 0032.scaffold00124 394391 1 A T - ReadM SNP 0032.scaffold00124 394451 1 C T - ReadM SNP 0032.scaffold00124 394465 1 A C - ReadM SNP 0032.scaffold00124 394495 1 A G - ReadM SNP 0032.scaffold00124 394626 1 A G - ReadM SNP 0032.scaffold00124 394823 1 C A - ReadM SNP 0032.scaffold00124 394978 1 A G - ReadM SNP 0032.scaffold00124 395061 1 G A - ReadM SNP 0032.scaffold00124 395079 1 A G - ReadM SNP 0032.scaffold00124 395310 1 T C - ReadM SNP 0032.scaffold00124 395315 1 G C - ReadM SNP 0032.scaffold00124 395321 1 G A - ReadM INDEL 0032.scaffold00124 395370 2 .. TT - ReadM SNP 0032.scaffold00124 395419 1 T G - ReadM SNP 0032.scaffold00124 395506 1 T G - ScafM SNP 0032.scaffold00124 396770 1 G C scaffold26266 ScafM INDEL 0032.scaffold00124 397482 1 . A scaffold26266 ScafM SNP 0032.scaffold00124 397503 1 A G scaffold26266 ScafM INDEL 0032.scaffold00124 397512 1 G . scaffold26266 ScafM SNP 0032.scaffold00124 397531 1 A G scaffold26266 ScafM INDEL 0032.scaffold00124 397533 3 AAA ... scaffold26266 ScafM SNP 0032.scaffold00124 397545 1 A C scaffold26266 ScafM SNP 0032.scaffold00124 397554 1 G C scaffold26266 ReadM INDEL 0032.scaffold00124 397633 1 . C - ReadM SNP 0032.scaffold00124 397657 1 T C - ReadM SNP 0032.scaffold00124 397803 1 A G - ReadM SNP 0032.scaffold00124 397825 1 T A - ReadM SNP 0032.scaffold00124 397988 1 C T - Both SNP 0032.scaffold00124 398119 1 C T scaffold26266 ReadM SNP 0032.scaffold00124 398252 1 T G - ReadM SNP 0032.scaffold00124 398300 1 A G - ReadM SNP 0032.scaffold00124 398439 1 G A - ReadM SNP 0032.scaffold00124 398545 1 C A - ReadM INDEL 0032.scaffold00124 398588 1 A . - ReadM SNP 0032.scaffold00124 400115 1 G C - ReadM INDEL 0032.scaffold00124 404145 1 . C - ReadM SNP 0032.scaffold00124 404221 1 A T - ReadM SNP 0032.scaffold00124 404300 1 T G - ReadM SNP 0032.scaffold00124 404305 1 G A - ReadM INDEL 0032.scaffold00124 404352 1 T . - ScafM SNP 0032.scaffold00124 404555 1 C T scaffold4465 ReadM SNP 0032.scaffold00124 404564 1 A T - ReadM SNP 0032.scaffold00124 404629 1 T C - ReadM SNP 0032.scaffold00124 404771 1 C G - ReadM SNP 0032.scaffold00124 405019 1 G A - ReadM SNP 0032.scaffold00124 405081 1 A G - ReadM SNP 0032.scaffold00124 405134 1 C T - ReadM SNP 0032.scaffold00124 405140 1 G C - ScafM SNP 0032.scaffold00124 405652 1 A C scaffold4465 ScafM SNP 0032.scaffold00124 405951 1 C T scaffold4465 ScafM INDEL 0032.scaffold00124 406023 1 T . scaffold4465 ScafM INDEL 0032.scaffold00124 406114 1 . C scaffold4465 ScafM SNP 0032.scaffold00124 406118 1 A T scaffold4465 ScafM SNP 0032.scaffold00124 406263 1 C A scaffold4465 ReadM INDEL 0032.scaffold00124 406717 2 GA .. - ReadM SNP 0032.scaffold00124 406729 1 G A - ReadM SNP 0032.scaffold00124 406837 1 G A - ReadM SNP 0032.scaffold00124 406861 1 G A - ReadM SNP 0032.scaffold00124 406946 1 G A - ReadM SNP 0032.scaffold00124 407145 1 T C - ReadM SNP 0032.scaffold00124 407214 1 C T - ReadM SNP 0032.scaffold00124 407231 1 T C - ReadM SNP 0032.scaffold00124 407255 1 A G - ReadM SNP 0032.scaffold00124 407326 1 T C - ReadM SNP 0032.scaffold00124 407347 1 G A - ReadM SNP 0032.scaffold00124 407359 1 T A - ReadM SNP 0032.scaffold00124 407407 1 A G - ReadM SNP 0032.scaffold00124 407417 1 G A - ReadM SNP 0032.scaffold00124 409825 1 C T - Both SNP 0032.scaffold00124 409952 1 T G scaffold4465 Both SNP 0032.scaffold00124 409978 1 C A scaffold4465 ScafM INDEL 0032.scaffold00124 410080 2 CA .. scaffold4465 ReadM SNP 0032.scaffold00124 410153 1 G A - ReadM SNP 0032.scaffold00124 410178 1 G A - ReadM INDEL 0032.scaffold00124 411770 1 . G - ReadM SNP 0032.scaffold00124 411785 1 T G - ScafM SNP 0032.scaffold00124 416122 1 A T scaffold4465 ScafM SNP 0032.scaffold00124 416125 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 416253 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 416827 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 416945 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 417035 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 417050 1 A T scaffold4465 ScafM SNP 0032.scaffold00124 417084 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 417093 1 T A scaffold4465 ScafM SNP 0032.scaffold00124 417101 1 C A scaffold4465 ScafM INDEL 0032.scaffold00124 417408 3 AGC ... scaffold4465 ScafM INDEL 0032.scaffold00124 417442 5 CCTGA ..... scaffold4465 ScafM INDEL 0032.scaffold00124 417448 2 CC .. scaffold4465 ScafM INDEL 0032.scaffold00124 417451 1 G . scaffold4465 ScafM SNP 0032.scaffold00124 417453 1 A G scaffold4465 ScafM INDEL 0032.scaffold00124 417455 2 CG .. scaffold4465 Both SNP 0032.scaffold00124 417541 1 C A scaffold4465 Both SNP 0032.scaffold00124 417552 1 C T scaffold4465 Both SNP 0032.scaffold00124 417588 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 417703 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 417705 1 C A scaffold4465 Both SNP 0032.scaffold00124 417727 1 A T scaffold4465 Both SNP 0032.scaffold00124 417801 1 C T scaffold4465 Both SNP 0032.scaffold00124 417922 1 C A scaffold4465 Both SNP 0032.scaffold00124 418053 1 A G scaffold4465 Both SNP 0032.scaffold00124 418099 1 C T scaffold4465 Both SNP 0032.scaffold00124 418120 1 C T scaffold4465 Both SNP 0032.scaffold00124 418193 1 G A scaffold4465 ReadM SNP 0032.scaffold00124 418283 2 CA TG - ReadM SNP 0032.scaffold00124 418364 1 G A - ReadM SNP 0032.scaffold00124 418399 1 G A - ReadM SNP 0032.scaffold00124 418418 1 A G - ReadM SNP 0032.scaffold00124 418439 1 T C - ScafM SNP 0032.scaffold00124 419005 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 419559 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 419681 1 A T scaffold4465 ScafM SNP 0032.scaffold00124 419780 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 419803 1 G T scaffold4465 ScafM SNP 0032.scaffold00124 419858 1 G T scaffold4465 ScafM SNP 0032.scaffold00124 419902 1 C A scaffold4465 ScafM SNP 0032.scaffold00124 419980 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 420013 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 420086 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 420107 1 A G scaffold4465 ReadM SNP 0032.scaffold00124 421999 1 A G - ReadM SNP 0032.scaffold00124 422192 1 T C - ReadM SNP 0032.scaffold00124 422246 1 A T - ReadM SNP 0032.scaffold00124 422254 1 G A - ReadM SNP 0032.scaffold00124 422372 1 T G - ReadM SNP 0032.scaffold00124 422385 1 C A - ReadM SNP 0032.scaffold00124 422395 1 G T - ReadM SNP 0032.scaffold00124 422619 1 G A - ReadM SNP 0032.scaffold00124 422681 1 G A - ReadM SNP 0032.scaffold00124 422740 1 C T - ReadM SNP 0032.scaffold00124 422816 1 T A - ReadM SNP 0032.scaffold00124 422898 1 A G - ReadM SNP 0032.scaffold00124 422932 1 A G - ReadM SNP 0032.scaffold00124 423006 1 G T - ReadM SNP 0032.scaffold00124 423076 1 C T - ReadM INDEL 0032.scaffold00124 423110 1 . C - ReadM SNP 0032.scaffold00124 423120 1 C T - ReadM SNP 0032.scaffold00124 423371 1 G T - ReadM SNP 0032.scaffold00124 423420 1 A C - Both SNP 0032.scaffold00124 423523 1 A G scaffold4465 Both SNP 0032.scaffold00124 423603 1 T C scaffold4465 ReadM SNP 0032.scaffold00124 423658 1 G A - ReadM SNP 0032.scaffold00124 423680 1 C T - ReadM SNP 0032.scaffold00124 423736 1 A G - ScafM SNP 0032.scaffold00124 423798 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 423801 1 G C scaffold4465 Both SNP 0032.scaffold00124 423854 1 A T scaffold4465 ReadM SNP 0032.scaffold00124 423936 1 C A - ReadM SNP 0032.scaffold00124 424387 1 A C - ReadM SNP 0032.scaffold00124 424427 1 A G - ScafM SNP 0032.scaffold00124 424756 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 424803 1 G A scaffold4465 Both SNP 0032.scaffold00124 425017 1 A T scaffold4465 Both SNP 0032.scaffold00124 425051 1 G T scaffold4465 ReadM INDEL 0032.scaffold00124 425115 1 C . - Both INDEL 0032.scaffold00124 425116 1 A . scaffold4465 Both SNP 0032.scaffold00124 425146 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 425211 2 AA TC scaffold4465 Both INDEL 0032.scaffold00124 425282 1 . A scaffold4465 Both SNP 0032.scaffold00124 425347 1 C A scaffold4465 Both SNP 0032.scaffold00124 425479 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 425699 1 T A scaffold4465 Both SNP 0032.scaffold00124 425723 1 C T scaffold4465 Both SNP 0032.scaffold00124 425773 1 A T scaffold4465 Both SNP 0032.scaffold00124 425861 1 T C scaffold4465 Both INDEL 0032.scaffold00124 425966 1 . A scaffold4465 ScafM SNP 0032.scaffold00124 425971 1 A T scaffold4465 Both SNP 0032.scaffold00124 426231 1 A C scaffold4465 Both SNP 0032.scaffold00124 426242 1 C T scaffold4465 Both INDEL 0032.scaffold00124 426377 1 C . scaffold4465 Both SNP 0032.scaffold00124 426380 1 T G scaffold4465 ScafM SNP 0032.scaffold00124 426857 1 G A scaffold4465 Both SNP 0032.scaffold00124 426930 1 C T scaffold4465 Both SNP 0032.scaffold00124 427097 1 A G scaffold4465 Both SNP 0032.scaffold00124 427129 1 C G scaffold4465 Both SNP 0032.scaffold00124 427239 1 A C scaffold4465 Both SNP 0032.scaffold00124 427281 1 T A scaffold4465 Both SNP 0032.scaffold00124 427462 1 C A scaffold4465 Both SNP 0032.scaffold00124 427480 1 C A scaffold4465 Both SNP 0032.scaffold00124 427596 1 A G scaffold4465 Both SNP 0032.scaffold00124 427963 1 T C scaffold4465 Both SNP 0032.scaffold00124 427993 1 G A scaffold4465 Both SNP 0032.scaffold00124 428016 1 T C scaffold4465 Both SNP 0032.scaffold00124 428026 1 T C scaffold4465 Both SNP 0032.scaffold00124 428236 1 C T scaffold4465 Both SNP 0032.scaffold00124 428311 1 C T scaffold4465 Both SNP 0032.scaffold00124 428552 1 T A scaffold4465 Both SNP 0032.scaffold00124 428557 1 A C scaffold4465 Both SNP 0032.scaffold00124 428592 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 428610 1 C A scaffold4465 Both SNP 0032.scaffold00124 428657 1 A G scaffold4465 Both SNP 0032.scaffold00124 428886 1 G T scaffold4465 Both INDEL 0032.scaffold00124 428920 2 AA .. scaffold4465 Both SNP 0032.scaffold00124 429059 1 A G scaffold4465 ReadM SNP 0032.scaffold00124 429090 1 G A - ReadM SNP 0032.scaffold00124 429455 1 G T - Both SNP 0032.scaffold00124 429522 1 C T scaffold4465 Both SNP 0032.scaffold00124 429545 1 C T scaffold4465 Both SNP 0032.scaffold00124 429594 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 429623 1 A T scaffold4465 ScafM INDEL 0032.scaffold00124 429650 13 ATAATCACTTTTT ............. scaffold4465 Both SNP 0032.scaffold00124 429694 1 G A scaffold4465 Both INDEL 0032.scaffold00124 429714 1 T . scaffold4465 ScafM SNP 0032.scaffold00124 429793 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 429806 1 G A scaffold4465 ScafM INDEL 0032.scaffold00124 429812 1 . T scaffold4465 ScafM INDEL 0032.scaffold00124 429822 10 .......... TATTTTCCCG scaffold4465 ScafM INDEL 0032.scaffold00124 429825 13 ............. TTCCCCCCAAACC scaffold4465 ScafM INDEL 0032.scaffold00124 429827 4 .... TTCG scaffold4465 ScafM SNP 0032.scaffold00124 429865 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 429948 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 430029 1 G A scaffold4465 ScafM INDEL 0032.scaffold00124 430125 7 ....... AAGGGTG scaffold4465 ScafM INDEL 0032.scaffold00124 430162 1 G . scaffold4465 ScafM SNP 0032.scaffold00124 430178 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 430181 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 430478 1 T A scaffold4465 ScafM SNP 0032.scaffold00124 430483 1 A T scaffold4465 ScafM SNP 0032.scaffold00124 430540 1 A G scaffold4465 Both SNP 0032.scaffold00124 430561 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 430641 1 A T scaffold4465 ScafM INDEL 0032.scaffold00124 430644 1 . T scaffold4465 ScafM INDEL 0032.scaffold00124 430659 10 .......... TTCTTAAATG scaffold4465 ScafM SNP 0032.scaffold00124 430674 1 T A scaffold4465 Both SNP 0032.scaffold00124 430875 1 C T scaffold4465 Both SNP 0032.scaffold00124 430893 1 A G scaffold4465 Both SNP 0032.scaffold00124 431098 1 T A scaffold4465 Both SNP 0032.scaffold00124 431226 1 G A scaffold4465 Both SNP 0032.scaffold00124 431386 1 A T scaffold4465 ReadM INDEL 0032.scaffold00124 431406 1 . A - ScafM INDEL 0032.scaffold00124 431406 2 .T AC scaffold4465 ScafM INDEL 0032.scaffold00124 431494 23 ATCTCCTGAGTCTCCGGAGCTTA ....................... scaffold4465 ScafM INDEL 0032.scaffold00124 431518 3 CCA ... scaffold4465 ScafM SNP 0032.scaffold00124 431531 2 CT TA scaffold4465 Both SNP 0032.scaffold00124 431557 1 C A scaffold4465 Both SNP 0032.scaffold00124 431722 1 G A scaffold4465 Both SNP 0032.scaffold00124 431869 1 A C scaffold4465 ScafM SNP 0032.scaffold00124 431921 1 A G scaffold4465 ReadM SNP 0032.scaffold00124 432080 1 T C - Both SNP 0032.scaffold00124 432130 1 T G scaffold4465 ReadM SNP 0032.scaffold00124 432238 1 C T - ReadM SNP 0032.scaffold00124 432242 1 C T - ReadM INDEL 0032.scaffold00124 432247 1 C . - ScafM INDEL 0032.scaffold00124 432692 2 .. AA scaffold4465 Both SNP 0032.scaffold00124 432739 1 G C scaffold4465 ScafM SNP 0032.scaffold00124 432834 1 G C scaffold4465 ScafM INDEL 0032.scaffold00124 432865 4 CTCC .... scaffold4465 Both SNP 0032.scaffold00124 432908 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 433023 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 433025 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 433052 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 433055 1 A G scaffold4465 ScafM INDEL 0032.scaffold00124 433094 1 . T scaffold4465 ScafM SNP 0032.scaffold00124 433103 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 433183 1 C A scaffold4465 ScafM INDEL 0032.scaffold00124 433190 1 . A scaffold4465 ScafM SNP 0032.scaffold00124 433255 1 T C scaffold4465 Both SNP 0032.scaffold00124 433425 1 A C scaffold4465 ScafM SNP 0032.scaffold00124 433457 1 G C scaffold4465 ScafM INDEL 0032.scaffold00124 433506 8 ........ AGGAAGAG scaffold4465 ScafM SNP 0032.scaffold00124 433583 2 AT GG scaffold4465 ScafM SNP 0032.scaffold00124 433618 1 T C scaffold4465 ReadM SNP 0032.scaffold00124 433727 1 A G - Both INDEL 0032.scaffold00124 433877 1 . T scaffold4465 Both SNP 0032.scaffold00124 433937 1 T A scaffold4465 Both SNP 0032.scaffold00124 434113 1 G A scaffold4465 Both SNP 0032.scaffold00124 434265 1 T C scaffold4465 Both SNP 0032.scaffold00124 434308 1 A C scaffold4465 Both SNP 0032.scaffold00124 434400 1 A G scaffold4465 Both SNP 0032.scaffold00124 434444 1 A G scaffold4465 Both SNP 0032.scaffold00124 434457 1 C T scaffold4465 Both SNP 0032.scaffold00124 434495 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 434564 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 434567 1 A T scaffold4465 Both SNP 0032.scaffold00124 434694 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 434727 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 434735 2 AT GC scaffold4465 ReadM INDEL 0032.scaffold00124 434793 1 A . - ReadM SNP 0032.scaffold00124 434837 1 A G - ReadM SNP 0032.scaffold00124 434953 1 T A - Both SNP 0032.scaffold00124 435096 1 A G scaffold4465 Both SNP 0032.scaffold00124 435109 1 G A scaffold4465 Both SNP 0032.scaffold00124 435317 1 C T scaffold4465 Both SNP 0032.scaffold00124 435328 1 G A scaffold4465 Both SNP 0032.scaffold00124 435355 1 C G scaffold4465 Both SNP 0032.scaffold00124 435482 1 C T scaffold4465 ReadM SNP 0032.scaffold00124 435574 1 A G - ReadM SNP 0032.scaffold00124 435576 1 G T - ReadM SNP 0032.scaffold00124 435646 1 G A - ReadM SNP 0032.scaffold00124 435689 1 G A - ReadM SNP 0032.scaffold00124 435703 1 G A - Both SNP 0032.scaffold00124 435768 1 A T scaffold4465 Both SNP 0032.scaffold00124 435793 1 T C scaffold4465 ReadM SNP 0032.scaffold00124 436141 1 T C - ScafM SNP 0032.scaffold00124 436509 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 436534 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 436568 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 436746 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 436760 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 436791 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 436799 1 A T scaffold4465 Both INDEL 0032.scaffold00124 436838 1 . A scaffold4465 Both SNP 0032.scaffold00124 436885 1 C A scaffold4465 Both SNP 0032.scaffold00124 436929 1 G T scaffold4465 Both SNP 0032.scaffold00124 436948 1 C T scaffold4465 Both SNP 0032.scaffold00124 437018 1 A G scaffold4465 Both SNP 0032.scaffold00124 437030 1 A G scaffold4465 Both SNP 0032.scaffold00124 437035 1 G A scaffold4465 Both SNP 0032.scaffold00124 437107 1 T C scaffold4465 ReadM INDEL 0032.scaffold00124 437206 1 . T - ReadM SNP 0032.scaffold00124 437415 1 A C - ReadM SNP 0032.scaffold00124 437500 1 T C - ReadM INDEL 0032.scaffold00124 437506 2 .. CT - Both SNP 0032.scaffold00124 437659 1 G T scaffold4465 Both SNP 0032.scaffold00124 437700 1 C A scaffold4465 Both SNP 0032.scaffold00124 437761 1 C T scaffold4465 Both SNP 0032.scaffold00124 437875 1 T G scaffold4465 Both SNP 0032.scaffold00124 437911 1 G A scaffold4465 Both INDEL 0032.scaffold00124 437938 1 . T scaffold4465 Both SNP 0032.scaffold00124 437972 1 A G scaffold4465 Both SNP 0032.scaffold00124 437996 1 G T scaffold4465 ScafM INDEL 0032.scaffold00124 438151 4 AAAA .... scaffold4465 ReadM SNP 0032.scaffold00124 438238 1 A G - ReadM INDEL 0032.scaffold00124 438413 1 . A - Both SNP 0032.scaffold00124 438574 1 C A scaffold4465 Both SNP 0032.scaffold00124 438957 1 A T scaffold4465 Both SNP 0032.scaffold00124 439110 1 G C scaffold4465 ScafM SNP 0032.scaffold00124 439154 1 A G scaffold4465 ScafM SNP 0032.scaffold00124 439156 1 G T scaffold4465 Both SNP 0032.scaffold00124 439184 1 A G scaffold4465 Both SNP 0032.scaffold00124 439386 1 T C scaffold4465 Both SNP 0032.scaffold00124 439390 1 A G scaffold4465 Both SNP 0032.scaffold00124 439423 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 439449 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 439473 1 T C scaffold4465 ScafM SNP 0032.scaffold00124 439477 1 T A scaffold4465 ScafM SNP 0032.scaffold00124 439500 1 C G scaffold4465 ScafM SNP 0032.scaffold00124 439504 1 G A scaffold4465 ScafM SNP 0032.scaffold00124 439614 1 C A scaffold4465 ScafM SNP 0032.scaffold00124 439637 1 C T scaffold4465 ScafM SNP 0032.scaffold00124 439683 1 A C scaffold4465 ScafM INDEL 0032.scaffold00124 439688 1 A . scaffold4465 ScafM SNP 0032.scaffold00124 439711 1 G A scaffold4465 ScafM INDEL 0032.scaffold00124 439719 1 . A scaffold4465 ScafM SNP 0032.scaffold00124 440075 1 C A scaffold10693 ScafM SNP 0032.scaffold00124 440100 1 T C scaffold10693 ScafM SNP 0032.scaffold00124 440232 1 T C scaffold10693 ScafM SNP 0032.scaffold00124 440346 1 A C scaffold10693 ScafM SNP 0032.scaffold00124 440385 1 T A scaffold10693 ScafM SNP 0032.scaffold00124 440433 1 T G scaffold10693 ReadM SNP 0032.scaffold00124 440797 1 T A - ReadM SNP 0032.scaffold00124 440852 1 C T - ReadM SNP 0032.scaffold00124 440973 1 T C - ReadM SNP 0032.scaffold00124 440976 1 A G - ReadM SNP 0032.scaffold00124 441002 1 T G - ReadM SNP 0032.scaffold00124 441153 1 T C - ReadM SNP 0032.scaffold00124 441429 1 T G - ReadM SNP 0032.scaffold00124 441855 1 G T - ReadM SNP 0032.scaffold00124 441868 1 G A - ReadM SNP 0032.scaffold00124 441907 1 C T - ReadM SNP 0032.scaffold00124 442365 1 T C - ReadM SNP 0032.scaffold00124 442589 1 C G - ReadM SNP 0032.scaffold00124 442676 1 C G - ReadM SNP 0032.scaffold00124 442691 1 C T - ReadM SNP 0032.scaffold00124 442703 1 C G - ReadM SNP 0032.scaffold00124 442903 1 A G - ReadM INDEL 0032.scaffold00124 443070 1 G . - ReadM SNP 0032.scaffold00124 443107 1 C T - ReadM SNP 0032.scaffold00124 443144 1 G A - ReadM SNP 0032.scaffold00124 443292 1 C T - ReadM SNP 0032.scaffold00124 443319 1 A G - ReadM SNP 0032.scaffold00124 443345 1 G A - ReadM SNP 0032.scaffold00124 443364 1 C T - ReadM INDEL 0032.scaffold00124 443415 2 .. TT - ReadM SNP 0032.scaffold00124 443476 1 A G - ReadM SNP 0032.scaffold00124 443499 1 G A - ReadM SNP 0032.scaffold00124 443548 1 A T - ReadM SNP 0032.scaffold00124 443720 1 T G - ReadM SNP 0032.scaffold00124 443732 1 C A - ReadM SNP 0032.scaffold00124 443863 1 C T - ReadM SNP 0032.scaffold00124 443892 1 G C - ReadM SNP 0032.scaffold00124 444104 1 T C - ReadM SNP 0032.scaffold00124 444176 1 G C - ReadM SNP 0032.scaffold00124 444202 1 T C - ReadM SNP 0032.scaffold00124 444380 1 A G - ReadM SNP 0032.scaffold00124 444451 1 T C - ReadM SNP 0032.scaffold00124 444465 1 A G - ReadM SNP 0032.scaffold00124 444499 1 A G - ReadM SNP 0032.scaffold00124 444513 1 G T - ReadM SNP 0032.scaffold00124 444740 1 A G - ReadM SNP 0032.scaffold00124 445114 1 C G - ReadM SNP 0032.scaffold00124 445311 1 T C - ReadM SNP 0032.scaffold00124 445443 1 A C - ReadM SNP 0032.scaffold00124 445641 1 G A - ReadM SNP 0032.scaffold00124 445670 1 T C - ReadM SNP 0032.scaffold00124 445984 1 T G - ReadM SNP 0032.scaffold00124 446047 1 C T - ReadM SNP 0032.scaffold00124 446071 1 G A - ReadM SNP 0032.scaffold00124 446122 1 A T - ReadM SNP 0032.scaffold00124 446160 1 G C - ReadM SNP 0032.scaffold00124 446232 1 G A - ReadM SNP 0032.scaffold00124 446355 1 G C - ReadM SNP 0032.scaffold00124 446726 1 T C - ReadM SNP 0032.scaffold00124 447283 1 G T - ReadM SNP 0032.scaffold00124 447309 1 T A - ReadM SNP 0032.scaffold00124 447373 1 A G - ReadM SNP 0032.scaffold00124 447457 1 T G - ReadM SNP 0032.scaffold00124 447499 1 G C - ReadM SNP 0032.scaffold00124 447864 1 C T - ReadM SNP 0032.scaffold00124 447888 1 T G - ReadM SNP 0032.scaffold00124 447895 1 G T - ReadM SNP 0032.scaffold00124 448353 1 T C - ReadM SNP 0032.scaffold00124 448497 1 A C - ReadM SNP 0032.scaffold00124 448506 1 C A - ReadM SNP 0032.scaffold00124 449062 1 C T - ReadM SNP 0032.scaffold00124 449089 1 T C - ReadM SNP 0032.scaffold00124 449319 2 GT AA - ReadM SNP 0032.scaffold00124 449427 1 C T - ReadM SNP 0032.scaffold00124 449449 1 A G - ReadM SNP 0032.scaffold00124 449843 1 C G - ReadM SNP 0032.scaffold00124 449915 1 T C - ReadM SNP 0032.scaffold00124 450348 1 T C - ReadM SNP 0032.scaffold00124 450665 1 A C - ReadM SNP 0032.scaffold00124 450835 1 T C - ReadM SNP 0032.scaffold00124 451290 1 G A - ReadM SNP 0032.scaffold00124 451396 1 A G - ReadM SNP 0032.scaffold00124 451460 1 T C - ReadM SNP 0032.scaffold00124 451496 1 G A - ReadM SNP 0032.scaffold00124 451632 1 C A - ReadM SNP 0032.scaffold00124 451658 1 C G - ReadM SNP 0032.scaffold00124 451687 1 C T - ReadM SNP 0032.scaffold00124 451735 1 C G - ReadM SNP 0032.scaffold00124 451884 1 G A - ReadM SNP 0032.scaffold00124 451891 1 T C - ReadM SNP 0032.scaffold00124 451977 1 C G - ReadM SNP 0032.scaffold00124 452158 1 A G - ReadM SNP 0032.scaffold00124 452343 1 A G - ReadM SNP 0032.scaffold00124 453712 1 C T - ScafM SNP 0032.scaffold00124 455398 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 455438 1 T C scaffold16777 ScafM SNP 0032.scaffold00124 455484 1 A G scaffold16777 ScafM SNP 0032.scaffold00124 455493 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 455502 1 G A scaffold16777 ScafM INDEL 0032.scaffold00124 455543 3 ... TTT scaffold16777 ReadM SNP 0032.scaffold00124 455732 1 G T - ReadM SNP 0032.scaffold00124 456022 1 G T - ReadM SNP 0032.scaffold00124 456049 1 T C - ReadM SNP 0032.scaffold00124 456102 1 C A - Both SNP 0032.scaffold00124 456128 1 A T scaffold16777 Both SNP 0032.scaffold00124 456199 1 C T scaffold16777 Both SNP 0032.scaffold00124 456272 1 G A scaffold16777 Both INDEL 0032.scaffold00124 456423 2 AC .. scaffold16777 Both SNP 0032.scaffold00124 456523 1 T A scaffold16777 Both SNP 0032.scaffold00124 456994 1 G C scaffold16777 Both SNP 0032.scaffold00124 457138 1 G T scaffold16777 Both SNP 0032.scaffold00124 457396 1 C T scaffold16777 Both SNP 0032.scaffold00124 457420 1 G A scaffold16777 Both SNP 0032.scaffold00124 457488 1 T C scaffold16777 Both SNP 0032.scaffold00124 457510 1 A T scaffold16777 Both SNP 0032.scaffold00124 457735 1 G A scaffold16777 ReadM SNP 0032.scaffold00124 458024 1 A C - ReadM SNP 0032.scaffold00124 458232 1 C T - ReadM SNP 0032.scaffold00124 458303 1 T C - ReadM SNP 0032.scaffold00124 458450 1 C T - ReadM SNP 0032.scaffold00124 458506 1 T C - ReadM SNP 0032.scaffold00124 458579 1 T C - ReadM SNP 0032.scaffold00124 458612 1 C T - ReadM SNP 0032.scaffold00124 458626 1 T C - ReadM SNP 0032.scaffold00124 458691 1 G C - ReadM SNP 0032.scaffold00124 458724 1 G T - ReadM SNP 0032.scaffold00124 458818 1 T C - ReadM SNP 0032.scaffold00124 458838 1 T G - ReadM SNP 0032.scaffold00124 458880 1 G A - ReadM SNP 0032.scaffold00124 458885 1 A G - Both SNP 0032.scaffold00124 459018 1 C T scaffold16777 Both SNP 0032.scaffold00124 459042 1 T C scaffold16777 Both SNP 0032.scaffold00124 459139 1 G A scaffold16777 Both INDEL 0032.scaffold00124 459177 1 A . scaffold16777 ScafM SNP 0032.scaffold00124 459291 1 G A scaffold16777 ScafM INDEL 0032.scaffold00124 459342 1 G . scaffold16777 Both SNP 0032.scaffold00124 459432 1 A T scaffold16777 Both SNP 0032.scaffold00124 459445 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 459464 1 A G scaffold16777 ScafM SNP 0032.scaffold00124 459482 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 459572 1 C T scaffold16777 Both SNP 0032.scaffold00124 459578 1 A T scaffold16777 ScafM SNP 0032.scaffold00124 459594 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 459653 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 459671 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 459678 1 G C scaffold16777 ScafM SNP 0032.scaffold00124 459681 1 T C scaffold16777 Both SNP 0032.scaffold00124 459719 1 C T scaffold16777 ReadM SNP 0032.scaffold00124 459763 1 T C - ReadM SNP 0032.scaffold00124 459795 1 A G - ReadM SNP 0032.scaffold00124 459857 1 G A - ReadM SNP 0032.scaffold00124 459918 1 A G - ReadM SNP 0032.scaffold00124 460039 1 C T - ReadM SNP 0032.scaffold00124 460063 1 A G - ReadM SNP 0032.scaffold00124 460402 1 T C - ReadM SNP 0032.scaffold00124 460415 1 T A - ReadM SNP 0032.scaffold00124 460509 1 G A - ReadM SNP 0032.scaffold00124 460530 1 G A - ReadM SNP 0032.scaffold00124 460559 1 T C - ReadM SNP 0032.scaffold00124 460941 1 G A - ReadM SNP 0032.scaffold00124 461065 1 G A - ReadM SNP 0032.scaffold00124 461083 1 T C - ReadM SNP 0032.scaffold00124 462965 1 A G - ReadM SNP 0032.scaffold00124 463015 1 T C - ReadM SNP 0032.scaffold00124 463039 1 T C - ReadM SNP 0032.scaffold00124 463267 1 A C - ReadM SNP 0032.scaffold00124 465288 1 T G - ReadM SNP 0032.scaffold00124 465339 1 A C - ReadM SNP 0032.scaffold00124 465425 1 T C - ReadM SNP 0032.scaffold00124 465519 1 T C - ReadM SNP 0032.scaffold00124 466100 1 C T - ReadM SNP 0032.scaffold00124 466118 1 C T - ReadM SNP 0032.scaffold00124 466217 1 A G - ReadM SNP 0032.scaffold00124 466511 1 C T - ReadM SNP 0032.scaffold00124 466560 1 G C - ReadM SNP 0032.scaffold00124 466604 1 A G - ReadM SNP 0032.scaffold00124 466609 1 T C - ReadM SNP 0032.scaffold00124 466720 1 A T - ReadM SNP 0032.scaffold00124 466948 1 T C - ReadM SNP 0032.scaffold00124 467180 1 G A - ReadM SNP 0032.scaffold00124 467186 1 C T - ReadM SNP 0032.scaffold00124 467391 1 A C - ReadM SNP 0032.scaffold00124 467396 1 G A - ReadM SNP 0032.scaffold00124 467428 1 T A - ReadM SNP 0032.scaffold00124 467447 1 A C - ReadM SNP 0032.scaffold00124 467496 1 A C - ReadM SNP 0032.scaffold00124 467596 1 G C - ReadM SNP 0032.scaffold00124 467613 1 G A - ReadM SNP 0032.scaffold00124 467633 1 A G - ReadM SNP 0032.scaffold00124 467675 1 T C - ReadM SNP 0032.scaffold00124 467685 1 C A - ReadM SNP 0032.scaffold00124 467731 1 T C - ReadM SNP 0032.scaffold00124 467786 1 G A - ReadM SNP 0032.scaffold00124 467949 1 A G - ReadM SNP 0032.scaffold00124 467953 1 A G - ReadM SNP 0032.scaffold00124 467985 1 C A - ReadM SNP 0032.scaffold00124 468100 1 A C - ReadM SNP 0032.scaffold00124 468110 1 T C - ReadM SNP 0032.scaffold00124 468391 1 A C - ReadM SNP 0032.scaffold00124 468580 1 G A - ReadM SNP 0032.scaffold00124 468640 1 G A - ReadM INDEL 0032.scaffold00124 468728 1 . T - ReadM SNP 0032.scaffold00124 468739 1 G C - ReadM SNP 0032.scaffold00124 468770 1 G T - ReadM INDEL 0032.scaffold00124 468898 1 G . - ReadM SNP 0032.scaffold00124 468912 1 G T - ReadM SNP 0032.scaffold00124 468942 1 C A - ReadM SNP 0032.scaffold00124 468981 1 G T - ReadM SNP 0032.scaffold00124 469032 1 C T - ReadM SNP 0032.scaffold00124 469047 1 T A - ReadM SNP 0032.scaffold00124 469087 1 A G - ReadM SNP 0032.scaffold00124 469096 1 G A - ReadM SNP 0032.scaffold00124 469153 1 T G - ReadM SNP 0032.scaffold00124 469258 1 A G - ReadM SNP 0032.scaffold00124 469309 1 G A - ReadM SNP 0032.scaffold00124 469315 1 G A - ReadM SNP 0032.scaffold00124 469417 1 G A - ReadM SNP 0032.scaffold00124 469437 1 G A - ReadM SNP 0032.scaffold00124 469531 1 T G - ReadM SNP 0032.scaffold00124 469563 1 C T - ReadM SNP 0032.scaffold00124 469603 1 T C - ReadM INDEL 0032.scaffold00124 469684 2 AT .. - ReadM SNP 0032.scaffold00124 470063 1 T G - ReadM SNP 0032.scaffold00124 470075 1 A G - ReadM SNP 0032.scaffold00124 470302 1 T C - ReadM SNP 0032.scaffold00124 470309 1 T C - ReadM SNP 0032.scaffold00124 470668 1 C A - ReadM SNP 0032.scaffold00124 470715 1 T A - ReadM SNP 0032.scaffold00124 470808 1 T A - ReadM SNP 0032.scaffold00124 470811 1 G T - ReadM SNP 0032.scaffold00124 470853 1 A G - ReadM SNP 0032.scaffold00124 470909 1 G A - ReadM SNP 0032.scaffold00124 470941 1 C T - Both SNP 0032.scaffold00124 470989 1 C T scaffold16777 Both INDEL 0032.scaffold00124 471083 1 T . scaffold16777 Both SNP 0032.scaffold00124 471177 1 T C scaffold16777 Both SNP 0032.scaffold00124 471191 1 A T scaffold16777 Both SNP 0032.scaffold00124 471264 1 T G scaffold16777 Both SNP 0032.scaffold00124 471305 1 A G scaffold16777 Both SNP 0032.scaffold00124 471312 1 C A scaffold16777 Both SNP 0032.scaffold00124 471418 1 A G scaffold16777 Both SNP 0032.scaffold00124 471422 1 T G scaffold16777 Both INDEL 0032.scaffold00124 471435 1 . A scaffold16777 ScafM SNP 0032.scaffold00124 471437 1 T G scaffold16777 Both SNP 0032.scaffold00124 471519 1 G A scaffold16777 Both SNP 0032.scaffold00124 471537 1 C T scaffold16777 Both SNP 0032.scaffold00124 471593 1 G A scaffold16777 Both SNP 0032.scaffold00124 471618 1 G T scaffold16777 Both SNP 0032.scaffold00124 471677 1 C T scaffold16777 Both SNP 0032.scaffold00124 471732 1 T C scaffold16777 Both SNP 0032.scaffold00124 471741 1 G A scaffold16777 Both SNP 0032.scaffold00124 471826 1 T C scaffold16777 Both SNP 0032.scaffold00124 471863 1 C A scaffold16777 Both SNP 0032.scaffold00124 471878 1 A G scaffold16777 Both SNP 0032.scaffold00124 471887 1 C T scaffold16777 Both SNP 0032.scaffold00124 471936 1 A C scaffold16777 Both SNP 0032.scaffold00124 471952 1 G A scaffold16777 Both SNP 0032.scaffold00124 471994 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 472005 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 472026 1 G C scaffold16777 ScafM SNP 0032.scaffold00124 472033 1 C A scaffold16777 Both SNP 0032.scaffold00124 472038 1 T C scaffold16777 ReadM SNP 0032.scaffold00124 472236 1 G A - ReadM SNP 0032.scaffold00124 472345 1 T C - ReadM SNP 0032.scaffold00124 472385 1 T G - ReadM SNP 0032.scaffold00124 472473 1 T G - ReadM SNP 0032.scaffold00124 472520 1 T C - ReadM INDEL 0032.scaffold00124 472626 1 C . - ReadM SNP 0032.scaffold00124 472693 2 CG TA - ReadM SNP 0032.scaffold00124 472767 1 A T - ReadM SNP 0032.scaffold00124 472832 1 C G - ReadM SNP 0032.scaffold00124 472840 1 C A - ReadM INDEL 0032.scaffold00124 472876 1 . T - ReadM SNP 0032.scaffold00124 472900 1 C T - ReadM SNP 0032.scaffold00124 472974 1 C T - ReadM SNP 0032.scaffold00124 473001 1 G C - ReadM SNP 0032.scaffold00124 473089 1 G C - ReadM SNP 0032.scaffold00124 473098 1 T C - ReadM SNP 0032.scaffold00124 473115 1 A G - ReadM SNP 0032.scaffold00124 473139 1 A T - ReadM SNP 0032.scaffold00124 473158 1 A G - ReadM SNP 0032.scaffold00124 473177 1 T C - ReadM SNP 0032.scaffold00124 473250 1 T C - ReadM SNP 0032.scaffold00124 473265 1 G A - ReadM SNP 0032.scaffold00124 473327 1 T G - ReadM SNP 0032.scaffold00124 473451 1 C A - ReadM SNP 0032.scaffold00124 473510 1 C T - ReadM SNP 0032.scaffold00124 473525 1 A G - ReadM SNP 0032.scaffold00124 473555 1 C T - ReadM SNP 0032.scaffold00124 473595 1 A G - ReadM SNP 0032.scaffold00124 473638 1 T C - ReadM SNP 0032.scaffold00124 473679 1 G A - ReadM SNP 0032.scaffold00124 473715 1 T C - ReadM SNP 0032.scaffold00124 473732 1 A C - ReadM SNP 0032.scaffold00124 473749 1 C G - ReadM SNP 0032.scaffold00124 473895 1 G C - ReadM SNP 0032.scaffold00124 473903 1 T A - ReadM SNP 0032.scaffold00124 473992 1 G A - Both SNP 0032.scaffold00124 474154 1 T G scaffold16777 ScafM SNP 0032.scaffold00124 474175 1 C T scaffold16777 ScafM SNP 0032.scaffold00124 474178 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 474182 1 A T scaffold16777 Both SNP 0032.scaffold00124 474393 1 C T scaffold16777 Both SNP 0032.scaffold00124 474501 1 A G scaffold16777 Both SNP 0032.scaffold00124 474554 1 G A scaffold16777 ReadM SNP 0032.scaffold00124 474650 1 A C - ReadM SNP 0032.scaffold00124 474793 1 G A - ReadM SNP 0032.scaffold00124 474973 1 G T - ReadM SNP 0032.scaffold00124 474982 1 A G - Both SNP 0032.scaffold00124 474994 1 G A scaffold16777 Both SNP 0032.scaffold00124 475034 1 G C scaffold16777 ScafM SNP 0032.scaffold00124 475054 1 G A scaffold16777 Both SNP 0032.scaffold00124 475061 1 G A scaffold16777 ScafM SNP 0032.scaffold00124 475169 1 T A scaffold16777 ScafM SNP 0032.scaffold00124 475171 2 TA CT scaffold16777 Both SNP 0032.scaffold00124 475243 1 A G scaffold16777 Both SNP 0032.scaffold00124 475297 1 G A scaffold16777 Both SNP 0032.scaffold00124 475343 1 A G scaffold16777 Both SNP 0032.scaffold00124 475363 1 C G scaffold16777 Both SNP 0032.scaffold00124 475387 1 C T scaffold16777 ReadM SNP 0032.scaffold00124 475446 1 C T - ReadM SNP 0032.scaffold00124 475585 1 T G - ReadM SNP 0032.scaffold00124 475594 1 A T - ReadM SNP 0032.scaffold00124 475673 1 G A - ReadM SNP 0032.scaffold00124 475720 1 C A - ScafM SNP 0032.scaffold00124 475910 1 A G scaffold16777 ScafM SNP 0032.scaffold00124 475919 1 A G scaffold16777 ScafM SNP 0032.scaffold00124 475993 1 T C scaffold16777 ReadM SNP 0032.scaffold00124 477207 1 A T - ReadM SNP 0032.scaffold00124 477296 1 C T - ReadM SNP 0032.scaffold00124 477314 1 A C - ReadM SNP 0032.scaffold00124 477390 1 T C - ReadM SNP 0032.scaffold00124 477502 1 T G - ReadM SNP 0032.scaffold00124 477505 1 A G - ReadM SNP 0032.scaffold00124 477520 1 G T - ReadM SNP 0032.scaffold00124 477640 1 G A - ReadM SNP 0032.scaffold00124 477723 1 A G - ReadM SNP 0032.scaffold00124 478118 1 A G - ReadM SNP 0032.scaffold00124 478135 1 C T - ReadM SNP 0032.scaffold00124 478272 1 T G - ReadM SNP 0032.scaffold00124 478281 1 G C - ReadM SNP 0032.scaffold00124 478378 1 C G - ReadM SNP 0032.scaffold00124 478419 1 G A - ReadM SNP 0032.scaffold00124 478518 1 G A - ReadM SNP 0032.scaffold00124 478546 1 T C - ReadM SNP 0032.scaffold00124 479040 1 T A - ReadM SNP 0032.scaffold00124 479269 1 A G - ReadM SNP 0032.scaffold00124 479362 1 A G - ReadM SNP 0032.scaffold00124 479580 1 C T - ReadM SNP 0032.scaffold00124 479601 1 A G - ReadM INDEL 0032.scaffold00124 479605 1 . A - ReadM SNP 0032.scaffold00124 479681 1 T C - ReadM SNP 0032.scaffold00124 479734 1 C G - Both SNP 0032.scaffold00124 479832 1 G T scaffold16777 Both SNP 0032.scaffold00124 479994 1 T A scaffold16777 ScafM SNP 0032.scaffold00124 480038 1 G A scaffold16777 ScafM INDEL 0032.scaffold00124 480059 7 TTTTTAT ....... scaffold16777 ScafM SNP 0032.scaffold00124 480068 2 GA TC scaffold16777 ScafM SNP 0032.scaffold00124 480074 1 G A scaffold16777 Both INDEL 0032.scaffold00124 480166 1 . A scaffold16777 Both SNP 0032.scaffold00124 480270 1 G A scaffold16777 Both SNP 0032.scaffold00124 480272 1 T A scaffold16777 ReadM SNP 0032.scaffold00124 480391 1 C A - ReadM SNP 0032.scaffold00124 480627 1 A G - ReadM SNP 0032.scaffold00124 480723 1 G T - Both SNP 0032.scaffold00124 480789 1 C T scaffold16777 Both SNP 0032.scaffold00124 480791 1 G C scaffold16777 Both SNP 0032.scaffold00124 480849 1 A C scaffold16777 Both SNP 0032.scaffold00124 480893 1 G T scaffold16777 ScafM INDEL 0032.scaffold00124 480923 1 T . scaffold16777 ScafM INDEL 0032.scaffold00124 480926 2 .. TT scaffold16777 Both SNP 0032.scaffold00124 480966 1 C T scaffold16777 ReadM SNP 0032.scaffold00124 481027 1 T G - ReadM SNP 0032.scaffold00124 481045 1 A G - ScafM INDEL 0032.scaffold00124 481159 10 AATGCGAAAT .......... scaffold16777 ReadM INDEL 0032.scaffold00124 481192 1 . A - ScafM INDEL 0032.scaffold00124 481560 3 AAA ..G scaffold16777 ScafM SNP 0032.scaffold00124 482053 1 A T scaffold5955 ScafM SNP 0032.scaffold00124 482089 1 A G scaffold5955 ScafM INDEL 0032.scaffold00124 482223 4 AGTA .... scaffold5955 ScafM SNP 0032.scaffold00124 482271 1 C G scaffold5955 ScafM SNP 0032.scaffold00124 482375 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 482422 1 G T scaffold5955 Both SNP 0032.scaffold00124 482457 1 G A scaffold5955 Both SNP 0032.scaffold00124 482827 1 G A scaffold5955 ScafM INDEL 0032.scaffold00124 482967 10 CATCAATTCC .......... scaffold5955 Both SNP 0032.scaffold00124 483062 1 A C scaffold5955 Both SNP 0032.scaffold00124 483210 1 C A scaffold5955 Both SNP 0032.scaffold00124 483534 1 A C scaffold5955 Both SNP 0032.scaffold00124 483560 1 T C scaffold5955 Both SNP 0032.scaffold00124 483898 1 T G scaffold5955 Both SNP 0032.scaffold00124 484174 1 G T scaffold5955 Both SNP 0032.scaffold00124 484208 1 T A scaffold5955 Both SNP 0032.scaffold00124 484377 1 C T scaffold5955 Both SNP 0032.scaffold00124 484717 1 A G scaffold5955 Both SNP 0032.scaffold00124 484868 1 A C scaffold5955 Both SNP 0032.scaffold00124 485344 1 C T scaffold5955 Both SNP 0032.scaffold00124 485460 1 A C scaffold5955 ReadM SNP 0032.scaffold00124 485514 1 C T - ReadM SNP 0032.scaffold00124 485882 1 G A - ReadM SNP 0032.scaffold00124 485918 1 A G - Both SNP 0032.scaffold00124 485969 1 G A scaffold5955 Both INDEL 0032.scaffold00124 486000 2 .. CA scaffold5955 Both SNP 0032.scaffold00124 486209 1 A G scaffold5955 Both SNP 0032.scaffold00124 486621 1 C T scaffold5955 Both INDEL 0032.scaffold00124 486853 1 . C scaffold5955 Both SNP 0032.scaffold00124 487126 1 C T scaffold5955 Both SNP 0032.scaffold00124 487246 1 C T scaffold5955 Both SNP 0032.scaffold00124 487363 1 T C scaffold5955 Both SNP 0032.scaffold00124 487532 1 T A scaffold5955 Both SNP 0032.scaffold00124 487569 1 T G scaffold5955 Both SNP 0032.scaffold00124 487754 1 G A scaffold5955 Both SNP 0032.scaffold00124 487757 1 T A scaffold5955 Both INDEL 0032.scaffold00124 487914 1 T . scaffold5955 Both SNP 0032.scaffold00124 487959 1 G A scaffold5955 Both SNP 0032.scaffold00124 488185 1 A G scaffold5955 Both SNP 0032.scaffold00124 488345 1 A C scaffold5955 Both SNP 0032.scaffold00124 488513 1 T A scaffold5955 Both SNP 0032.scaffold00124 488572 1 A T scaffold5955 Both SNP 0032.scaffold00124 488584 1 G A scaffold5955 Both SNP 0032.scaffold00124 488624 1 G A scaffold5955 Both SNP 0032.scaffold00124 488683 1 T A scaffold5955 Both INDEL 0032.scaffold00124 488938 1 C . scaffold5955 Both SNP 0032.scaffold00124 489033 1 A G scaffold5955 ReadM INDEL 0032.scaffold00124 489082 2 AT .. - ReadM SNP 0032.scaffold00124 489214 1 G A - ReadM SNP 0032.scaffold00124 489220 1 C A - ReadM INDEL 0032.scaffold00124 489340 1 . T - ReadM SNP 0032.scaffold00124 489367 1 T G - ScafM SNP 0032.scaffold00124 489404 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 489430 1 A T scaffold5955 ScafM SNP 0032.scaffold00124 489434 1 C G scaffold5955 ScafM SNP 0032.scaffold00124 489436 2 CC GT scaffold5955 ScafM INDEL 0032.scaffold00124 489440 1 T . scaffold5955 ScafM INDEL 0032.scaffold00124 489483 7 ACTCTTG ....... scaffold5955 ScafM SNP 0032.scaffold00124 489516 1 T C scaffold5955 Both SNP 0032.scaffold00124 489532 1 A G scaffold5955 Both SNP 0032.scaffold00124 489628 1 A T scaffold5955 Both SNP 0032.scaffold00124 489634 1 G A scaffold5955 Both SNP 0032.scaffold00124 489802 1 G T scaffold5955 Both SNP 0032.scaffold00124 489807 1 T A scaffold5955 Both SNP 0032.scaffold00124 489884 1 A G scaffold5955 ScafM SNP 0032.scaffold00124 490122 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 491106 1 A C scaffold5955 ScafM SNP 0032.scaffold00124 491129 1 C T scaffold5955 ReadM SNP 0032.scaffold00124 491257 1 C T - ScafM SNP 0032.scaffold00124 491357 2 AG GA scaffold5955 Both INDEL 0032.scaffold00124 491364 1 T . scaffold5955 ScafM SNP 0032.scaffold00124 491463 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 491473 2 AC TA scaffold5955 ScafM SNP 0032.scaffold00124 491510 1 T G scaffold5955 Both SNP 0032.scaffold00124 491531 1 A G scaffold5955 Both SNP 0032.scaffold00124 491613 1 A G scaffold5955 Both SNP 0032.scaffold00124 491671 1 T C scaffold5955 Both SNP 0032.scaffold00124 491686 1 A C scaffold5955 ScafM SNP 0032.scaffold00124 491701 1 A C scaffold5955 ScafM INDEL 0032.scaffold00124 491758 3 ... CCC scaffold5955 ScafM INDEL 0032.scaffold00124 491759 3 ... TCC scaffold5955 ScafM INDEL 0032.scaffold00124 491760 4 .... ATAT scaffold5955 ScafM INDEL 0032.scaffold00124 491782 1 G . scaffold5955 ScafM SNP 0032.scaffold00124 491834 1 T G scaffold5955 ScafM INDEL 0032.scaffold00124 491850 2 GC .. scaffold5955 ScafM INDEL 0032.scaffold00124 491925 4 ATAT .... scaffold5955 ScafM SNP 0032.scaffold00124 491936 1 T C scaffold5955 ScafM SNP 0032.scaffold00124 491960 1 C T scaffold5955 Both SNP 0032.scaffold00124 492053 1 T C scaffold5955 Both SNP 0032.scaffold00124 492126 1 C T scaffold5955 Both SNP 0032.scaffold00124 492260 1 C T scaffold5955 ReadM SNP 0032.scaffold00124 492334 1 G T - ReadM SNP 0032.scaffold00124 492382 1 C T - ReadM SNP 0032.scaffold00124 492422 1 G T - ReadM SNP 0032.scaffold00124 492490 1 T C - Both SNP 0032.scaffold00124 492546 1 A T scaffold5955 Both SNP 0032.scaffold00124 492563 1 T C scaffold5955 ReadM SNP 0032.scaffold00124 492963 1 T A - ReadM SNP 0032.scaffold00124 493189 1 G T - ReadM SNP 0032.scaffold00124 493305 1 G A - ReadM SNP 0032.scaffold00124 493412 1 C T - ReadM SNP 0032.scaffold00124 493455 1 C A - ReadM SNP 0032.scaffold00124 493519 1 T G - ReadM SNP 0032.scaffold00124 493608 1 A G - ReadM SNP 0032.scaffold00124 493631 1 C T - ReadM SNP 0032.scaffold00124 493656 1 A G - ReadM SNP 0032.scaffold00124 493739 1 G C - ReadM SNP 0032.scaffold00124 493821 1 G A - ReadM SNP 0032.scaffold00124 493846 1 C T - ReadM SNP 0032.scaffold00124 493923 1 C T - ReadM SNP 0032.scaffold00124 494039 1 C A - ReadM SNP 0032.scaffold00124 494101 1 G A - ReadM SNP 0032.scaffold00124 494106 1 A G - ReadM SNP 0032.scaffold00124 494195 1 T G - ScafM SNP 0032.scaffold00124 495623 1 C A scaffold5955 ScafM SNP 0032.scaffold00124 495634 1 G T scaffold5955 ScafM SNP 0032.scaffold00124 495675 1 T C scaffold5955 ScafM SNP 0032.scaffold00124 495754 1 G A scaffold5955 ScafM SNP 0032.scaffold00124 495954 1 T C scaffold5955 Both SNP 0032.scaffold00124 505288 1 T C scaffold5955 Both SNP 0032.scaffold00124 505293 1 A G scaffold5955 Both SNP 0032.scaffold00124 505358 1 C T scaffold5955 Both SNP 0032.scaffold00124 505573 1 C A scaffold5955 Both SNP 0032.scaffold00124 505591 1 G A scaffold5955 Both SNP 0032.scaffold00124 505603 1 A G scaffold5955 ScafM SNP 0032.scaffold00124 505683 1 A T scaffold5955 ReadM SNP 0032.scaffold00124 505762 1 G A - ReadM SNP 0032.scaffold00124 505772 1 C T - ScafM SNP 0032.scaffold00124 505876 1 C G scaffold5955 ScafM SNP 0032.scaffold00124 505975 1 C G scaffold5955 ReadM SNP 0032.scaffold00124 506902 1 T C - ReadM SNP 0032.scaffold00124 507080 1 C A - ReadM SNP 0032.scaffold00124 507112 1 T C - ReadM SNP 0032.scaffold00124 507177 1 C T - ReadM SNP 0032.scaffold00124 507232 1 G T - ReadM SNP 0032.scaffold00124 507237 1 T C - ReadM SNP 0032.scaffold00124 507384 1 G A - ReadM SNP 0032.scaffold00124 507649 1 T G - ReadM SNP 0032.scaffold00124 507693 1 T C - ReadM SNP 0032.scaffold00124 507739 1 C T - ReadM SNP 0032.scaffold00124 507801 1 G C - ReadM SNP 0032.scaffold00124 507806 1 T C - ReadM SNP 0032.scaffold00124 507914 1 A G - ReadM SNP 0032.scaffold00124 507924 1 A G - ReadM SNP 0032.scaffold00124 507952 1 A G - ReadM SNP 0032.scaffold00124 507971 1 T C - ReadM INDEL 0032.scaffold00124 508130 1 T . - ReadM INDEL 0032.scaffold00124 508251 1 G . - ReadM SNP 0032.scaffold00124 508254 1 T C - ReadM SNP 0032.scaffold00124 508285 1 T C - ReadM SNP 0032.scaffold00124 508289 1 T A - ReadM SNP 0032.scaffold00124 508317 1 A T - ReadM SNP 0032.scaffold00124 508412 1 T C - ReadM SNP 0032.scaffold00124 508566 1 C G - ReadM SNP 0032.scaffold00124 508586 1 C T - ReadM SNP 0032.scaffold00124 508592 1 G A - ReadM SNP 0032.scaffold00124 508617 1 T C - ReadM SNP 0032.scaffold00124 508708 1 A G - ReadM SNP 0032.scaffold00124 508834 1 T C - ReadM SNP 0032.scaffold00124 508872 1 C A - ReadM SNP 0032.scaffold00124 508996 1 C T - ReadM SNP 0032.scaffold00124 509013 1 G A - ReadM SNP 0032.scaffold00124 509035 1 C T - ReadM SNP 0032.scaffold00124 509103 1 C T - ReadM SNP 0032.scaffold00124 509202 1 C T - ReadM SNP 0032.scaffold00124 509258 1 T G - ReadM SNP 0032.scaffold00124 509299 1 A G - ReadM SNP 0032.scaffold00124 509316 1 C A - ReadM SNP 0032.scaffold00124 509380 1 T C - ReadM SNP 0032.scaffold00124 509587 1 T A - ReadM SNP 0032.scaffold00124 509606 1 A G - ReadM SNP 0032.scaffold00124 509695 1 G A - ReadM SNP 0032.scaffold00124 509765 1 T A - ReadM SNP 0032.scaffold00124 509978 1 C T - ReadM SNP 0032.scaffold00124 510082 1 G A - ReadM SNP 0032.scaffold00124 510289 1 T C - ReadM SNP 0032.scaffold00124 510331 1 A T - ReadM SNP 0032.scaffold00124 510425 1 G C - ReadM SNP 0032.scaffold00124 510429 1 G C - ReadM SNP 0032.scaffold00124 510468 1 A G - ReadM SNP 0032.scaffold00124 510470 1 A G - ReadM SNP 0032.scaffold00124 510526 1 C G - ReadM SNP 0032.scaffold00124 510625 1 T C - ReadM SNP 0032.scaffold00124 510637 1 C T - ReadM SNP 0032.scaffold00124 510762 1 C T - ReadM SNP 0032.scaffold00124 510827 1 G A - ReadM SNP 0032.scaffold00124 510905 1 C T - ReadM SNP 0032.scaffold00124 510957 1 G A - ReadM INDEL 0032.scaffold00124 510960 1 . T - ReadM SNP 0032.scaffold00124 511054 1 A G - ReadM SNP 0032.scaffold00124 511191 1 C T - ReadM INDEL 0032.scaffold00124 511343 1 . G - ReadM SNP 0032.scaffold00124 511475 1 T G - ReadM SNP 0032.scaffold00124 511489 1 G T - ReadM SNP 0032.scaffold00124 511663 1 A T - ReadM SNP 0032.scaffold00124 511710 1 A G - ReadM SNP 0032.scaffold00124 511840 1 G C - ReadM SNP 0032.scaffold00124 511910 1 T G - ScafM SNP 0032.scaffold00124 512139 1 C T scaffold5955 ScafM INDEL 0032.scaffold00124 512172 4 .... TAAA scaffold5955 ScafM SNP 0032.scaffold00124 512200 1 C A scaffold5955 ScafM SNP 0032.scaffold00124 512223 1 A G scaffold5955 ScafM SNP 0032.scaffold00124 512226 1 G A scaffold5955 ScafM SNP 0032.scaffold00124 512240 1 G T scaffold5955 ScafM INDEL 0032.scaffold00124 512261 21 ..................... CAAATTTTTACCAAACTTTGC scaffold5955 ScafM SNP 0032.scaffold00124 512274 1 A G scaffold5955 ScafM SNP 0032.scaffold00124 512291 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 512309 1 T A scaffold5955 ScafM SNP 0032.scaffold00124 512348 1 T A scaffold5955 ScafM SNP 0032.scaffold00124 512423 1 A C scaffold5955 ScafM INDEL 0032.scaffold00124 512431 1 . T scaffold5955 ScafM SNP 0032.scaffold00124 512484 1 T C scaffold5955 ScafM SNP 0032.scaffold00124 512488 1 T C scaffold5955 ScafM SNP 0032.scaffold00124 512509 1 G A scaffold5955 ScafM SNP 0032.scaffold00124 512526 1 C T scaffold5955 ScafM SNP 0032.scaffold00124 512570 1 T C scaffold5955 ScafM SNP 0032.scaffold00124 512572 1 G A scaffold5955 ScafM SNP 0032.scaffold00124 512608 1 A G scaffold5955 ScafM SNP 0032.scaffold00124 512613 1 G A scaffold5955 ScafM SNP 0032.scaffold00124 512624 1 A G scaffold5955 ReadM SNP 0032.scaffold00124 512904 1 A G - ReadM SNP 0032.scaffold00124 512959 1 C T - ReadM SNP 0032.scaffold00124 512973 1 A T - ReadM SNP 0032.scaffold00124 513255 1 C A - ReadM SNP 0032.scaffold00124 513373 1 T A - ReadM SNP 0032.scaffold00124 513453 1 A G - ReadM SNP 0032.scaffold00124 513559 1 T C - ReadM SNP 0032.scaffold00124 513606 1 A G - ReadM SNP 0032.scaffold00124 513667 1 C T - ReadM SNP 0032.scaffold00124 513773 1 A C - ReadM SNP 0032.scaffold00124 513883 1 A G - ReadM SNP 0032.scaffold00124 513911 1 A T - ReadM SNP 0032.scaffold00124 514084 1 G A - ReadM SNP 0032.scaffold00124 514226 1 A G - ReadM SNP 0032.scaffold00124 514397 1 A T - ReadM INDEL 0032.scaffold00124 514533 1 G . - ReadM SNP 0032.scaffold00124 514569 1 C T - ReadM SNP 0032.scaffold00124 514659 1 C A - ReadM SNP 0032.scaffold00124 514716 1 T G - ReadM SNP 0032.scaffold00124 514911 1 T G - ReadM SNP 0032.scaffold00124 514914 1 G A - ReadM SNP 0032.scaffold00124 514939 1 G A - ReadM SNP 0032.scaffold00124 514991 1 A T - ReadM INDEL 0032.scaffold00124 515423 1 . A - ScafM INDEL 0032.scaffold00124 524539 1 . A scaffold4819 ScafM SNP 0032.scaffold00124 526547 1 A G scaffold506 ScafM SNP 0032.scaffold00124 526566 1 C G scaffold506 ScafM SNP 0032.scaffold00124 526574 1 C A scaffold506 ScafM SNP 0032.scaffold00124 526590 1 T C scaffold506 ScafM INDEL 0032.scaffold00124 526616 22 ATATGCTACGCTTTTGAAGCGC ...................... scaffold506 ScafM SNP 0032.scaffold00124 526661 1 T C scaffold506 ScafM SNP 0032.scaffold00124 526663 1 G A scaffold506 ScafM SNP 0032.scaffold00124 526707 1 T G scaffold506 ScafM SNP 0032.scaffold00124 526709 1 T A scaffold506 ScafM INDEL 0032.scaffold00124 526737 2 .. AA scaffold506 ScafM INDEL 0032.scaffold00124 526762 1 G . scaffold506 ScafM INDEL 0032.scaffold00124 526777 1 . A scaffold506 ScafM INDEL 0032.scaffold00124 526845 1 . A scaffold506 ScafM SNP 0032.scaffold00124 526858 1 C T scaffold506 ScafM SNP 0032.scaffold00124 526867 1 T A scaffold506 ScafM INDEL 0032.scaffold00124 526926 2 .. AA scaffold506 ScafM SNP 0032.scaffold00124 526937 1 T C scaffold506 ScafM SNP 0032.scaffold00124 526942 1 A T scaffold506 ScafM SNP 0032.scaffold00124 526965 1 T C scaffold506 ScafM SNP 0032.scaffold00124 526978 1 C T scaffold506 ScafM SNP 0032.scaffold00124 527026 1 C T scaffold506 ScafM SNP 0032.scaffold00124 527030 1 G A scaffold506 ScafM SNP 0032.scaffold00124 527059 1 C G scaffold506 ScafM SNP 0032.scaffold00124 527069 1 C G scaffold506 ScafM SNP 0032.scaffold00124 527088 1 T A scaffold506 ScafM SNP 0032.scaffold00124 527153 1 G A scaffold506 ScafM SNP 0032.scaffold00124 527168 1 T C scaffold506 ScafM SNP 0032.scaffold00124 527219 1 C G scaffold506 ScafM SNP 0032.scaffold00124 527230 2 GC AT scaffold506 ScafM SNP 0032.scaffold00124 527244 1 C T scaffold506 ScafM SNP 0032.scaffold00124 527248 1 A G scaffold506 ScafM SNP 0032.scaffold00124 527253 1 A G scaffold506 ScafM SNP 0032.scaffold00124 527288 1 A C scaffold506 ScafM SNP 0033.scaffold00127 5 1 A T scaffold23869 ScafM SNP 0033.scaffold00127 4864 1 T C scaffold23869 ScafM SNP 0033.scaffold00127 4873 1 A G scaffold23869 ScafM INDEL 0033.scaffold00127 11812 17 GGTTATGCTCACAACTA ................. scaffold23869 Both SNP 0033.scaffold00127 30932 1 A C scaffold19077 ScafM INDEL 0033.scaffold00127 32797 16 ................ GGGGGGGGGGGGGGGT scaffold19077 ReadM SNP 0033.scaffold00127 53114 1 A G - ScafM INDEL 0033.scaffold00127 85519 4 AATA .... scaffold10629 ScafM INDEL 0033.scaffold00127 85527 9 TTTTTTTTT ......... scaffold10629 ScafM SNP 0033.scaffold00127 85540 1 T G scaffold10629 Both SNP 0033.scaffold00127 85911 1 A G scaffold10629 ReadM SNP 0033.scaffold00127 86160 1 T C - ReadM SNP 0033.scaffold00127 86170 1 G A - ReadM SNP 0033.scaffold00127 86294 1 C T - ScafM SNP 0033.scaffold00127 86306 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 86312 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 86326 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 86353 1 A G scaffold10629 Both SNP 0033.scaffold00127 86388 1 G A scaffold10629 Both INDEL 0033.scaffold00127 86447 1 . C scaffold10629 ScafM SNP 0033.scaffold00127 86531 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 87775 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 87784 1 C G scaffold10629 ScafM SNP 0033.scaffold00127 87796 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 87845 1 A T scaffold10629 ScafM SNP 0033.scaffold00127 87879 1 A T scaffold10629 ScafM SNP 0033.scaffold00127 87894 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 87899 1 T G scaffold10629 ScafM INDEL 0033.scaffold00127 87907 7 AACAACT ....... scaffold10629 ScafM SNP 0033.scaffold00127 87956 1 T G scaffold10629 ScafM INDEL 0033.scaffold00127 87986 4 ATAA .... scaffold10629 ScafM SNP 0033.scaffold00127 88043 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 88046 1 C A scaffold10629 Both SNP 0033.scaffold00127 88111 1 A G scaffold10629 ReadM SNP 0033.scaffold00127 88152 1 T C - ReadM SNP 0033.scaffold00127 88157 1 C T - ReadM INDEL 0033.scaffold00127 88500 1 . A - ReadM INDEL 0033.scaffold00127 88659 1 T . - ScafM INDEL 0033.scaffold00127 88847 1 . G scaffold10629 ScafM SNP 0033.scaffold00127 89015 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 91140 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 91152 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 91200 1 A G scaffold10629 Both SNP 0033.scaffold00127 91374 1 A T scaffold10629 Both SNP 0033.scaffold00127 91406 1 A G scaffold10629 Both INDEL 0033.scaffold00127 91657 1 . G scaffold10629 ReadM INDEL 0033.scaffold00127 91898 1 . A - ScafM INDEL 0033.scaffold00127 91898 2 .G AT scaffold10629 Both SNP 0033.scaffold00127 91934 1 T G scaffold10629 Both INDEL 0033.scaffold00127 91968 1 T . scaffold10629 Both SNP 0033.scaffold00127 92058 1 G A scaffold10629 ReadM INDEL 0033.scaffold00127 92139 2 TG .. - ScafM INDEL 0033.scaffold00127 92139 3 TGA ..C scaffold10629 Both INDEL 0033.scaffold00127 92175 1 . T scaffold10629 Both SNP 0033.scaffold00127 92188 1 T G scaffold10629 ReadM SNP 0033.scaffold00127 92326 1 T G - ReadM SNP 0033.scaffold00127 92437 1 T C - ReadM SNP 0033.scaffold00127 92566 1 T C - ReadM SNP 0033.scaffold00127 92594 1 T C - ReadM SNP 0033.scaffold00127 92600 1 C A - ReadM SNP 0033.scaffold00127 92727 1 G A - ReadM SNP 0033.scaffold00127 92733 1 C T - ReadM SNP 0033.scaffold00127 92838 1 C T - Both SNP 0033.scaffold00127 92877 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 92894 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 92903 1 G C scaffold10629 Both SNP 0033.scaffold00127 92917 1 A G scaffold10629 ScafM INDEL 0033.scaffold00127 92986 2 .. TT scaffold10629 Both SNP 0033.scaffold00127 93003 1 G A scaffold10629 Both SNP 0033.scaffold00127 93026 1 A T scaffold10629 Both SNP 0033.scaffold00127 93059 1 A T scaffold10629 Both INDEL 0033.scaffold00127 93112 2 .. GA scaffold10629 Both SNP 0033.scaffold00127 93196 1 C G scaffold10629 ReadM INDEL 0033.scaffold00127 93260 1 A . - ReadM SNP 0033.scaffold00127 93295 1 A C - ReadM SNP 0033.scaffold00127 93297 1 C T - ReadM SNP 0033.scaffold00127 93375 1 C T - ReadM SNP 0033.scaffold00127 93387 1 T G - ReadM SNP 0033.scaffold00127 93580 1 C T - Both SNP 0033.scaffold00127 93668 1 T C scaffold10629 Both SNP 0033.scaffold00127 93737 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 93897 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 95334 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 95390 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 95398 1 G C scaffold10629 ScafM SNP 0033.scaffold00127 95483 1 T G scaffold10629 ScafM INDEL 0033.scaffold00127 95545 6 ...... TTTTTT scaffold10629 ScafM SNP 0033.scaffold00127 95555 1 A G scaffold10629 ScafM INDEL 0033.scaffold00127 95558 5 AAATT ..... scaffold10629 ScafM INDEL 0033.scaffold00127 95635 4 GCAA .... scaffold10629 ScafM SNP 0033.scaffold00127 95679 1 C G scaffold10629 Both SNP 0033.scaffold00127 95725 1 C A scaffold10629 Both SNP 0033.scaffold00127 95793 1 C A scaffold10629 Both SNP 0033.scaffold00127 95815 1 A C scaffold10629 Both INDEL 0033.scaffold00127 95853 1 A . scaffold10629 Both SNP 0033.scaffold00127 95885 1 G A scaffold10629 Both SNP 0033.scaffold00127 95960 1 T G scaffold10629 Both INDEL 0033.scaffold00127 96000 2 .. GC scaffold10629 Both SNP 0033.scaffold00127 96142 1 G A scaffold10629 Both SNP 0033.scaffold00127 96209 1 T C scaffold10629 Both SNP 0033.scaffold00127 96278 1 A C scaffold10629 Both SNP 0033.scaffold00127 96348 1 G A scaffold10629 Both SNP 0033.scaffold00127 96393 1 A G scaffold10629 Both SNP 0033.scaffold00127 96484 1 G A scaffold10629 Both SNP 0033.scaffold00127 96640 1 A G scaffold10629 Both SNP 0033.scaffold00127 96685 1 T C scaffold10629 Both SNP 0033.scaffold00127 96713 1 T G scaffold10629 Both SNP 0033.scaffold00127 96794 1 C T scaffold10629 ReadM SNP 0033.scaffold00127 96834 1 T G - ReadM SNP 0033.scaffold00127 96891 1 C T - ReadM INDEL 0033.scaffold00127 96947 1 C . - ReadM SNP 0033.scaffold00127 97128 1 C A - ReadM SNP 0033.scaffold00127 97221 1 T G - ReadM SNP 0033.scaffold00127 97322 1 A T - ReadM SNP 0033.scaffold00127 97352 1 T C - ReadM SNP 0033.scaffold00127 97457 1 A G - ReadM SNP 0033.scaffold00127 97512 1 C G - Both SNP 0033.scaffold00127 97582 1 T C scaffold10629 Both SNP 0033.scaffold00127 97754 1 G A scaffold10629 Both SNP 0033.scaffold00127 97882 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 97945 1 G A scaffold10629 Both SNP 0033.scaffold00127 98017 1 A G scaffold10629 Both SNP 0033.scaffold00127 98111 1 T C scaffold10629 Both SNP 0033.scaffold00127 98145 1 T C scaffold10629 Both SNP 0033.scaffold00127 98167 1 C T scaffold10629 Both SNP 0033.scaffold00127 98219 1 G T scaffold10629 Both SNP 0033.scaffold00127 98261 1 C T scaffold10629 Both SNP 0033.scaffold00127 98278 1 G A scaffold10629 Both SNP 0033.scaffold00127 98354 1 A G scaffold10629 Both SNP 0033.scaffold00127 98472 1 C T scaffold10629 Both SNP 0033.scaffold00127 98499 1 C T scaffold10629 ReadM SNP 0033.scaffold00127 98626 1 G C - ReadM SNP 0033.scaffold00127 98657 1 C T - ReadM SNP 0033.scaffold00127 98678 1 A G - ReadM SNP 0033.scaffold00127 98710 1 C G - ReadM SNP 0033.scaffold00127 98712 1 A G - ReadM SNP 0033.scaffold00127 98800 1 T A - ReadM SNP 0033.scaffold00127 98850 1 C T - ReadM SNP 0033.scaffold00127 98959 1 G A - ReadM SNP 0033.scaffold00127 98992 1 G A - ReadM SNP 0033.scaffold00127 99154 1 A G - ReadM SNP 0033.scaffold00127 99172 1 A C - ReadM SNP 0033.scaffold00127 99215 1 T C - ReadM SNP 0033.scaffold00127 99440 1 T C - ReadM SNP 0033.scaffold00127 99565 1 G A - ReadM SNP 0033.scaffold00127 99611 1 A T - ReadM SNP 0033.scaffold00127 99613 1 G T - ReadM SNP 0033.scaffold00127 99697 1 T C - ReadM SNP 0033.scaffold00127 99712 1 T G - ReadM SNP 0033.scaffold00127 99752 1 T C - ReadM INDEL 0033.scaffold00127 99836 1 T . - ReadM SNP 0033.scaffold00127 99863 1 C T - ReadM SNP 0033.scaffold00127 99949 2 TA CC - ReadM SNP 0033.scaffold00127 100031 1 T C - ReadM SNP 0033.scaffold00127 100042 1 C T - ReadM SNP 0033.scaffold00127 100051 1 C T - ReadM SNP 0033.scaffold00127 100068 1 A T - ReadM SNP 0033.scaffold00127 100082 1 C G - ReadM SNP 0033.scaffold00127 100112 1 C T - ReadM SNP 0033.scaffold00127 100181 1 C T - ReadM SNP 0033.scaffold00127 100300 1 T C - Both SNP 0033.scaffold00127 100610 1 C A scaffold10629 ScafM SNP 0033.scaffold00127 100616 1 C T scaffold10629 ScafM INDEL 0033.scaffold00127 100625 3 ... ATA scaffold10629 ScafM SNP 0033.scaffold00127 100654 1 C T scaffold10629 Both SNP 0033.scaffold00127 100677 1 C T scaffold10629 Both SNP 0033.scaffold00127 100725 1 A T scaffold10629 Both SNP 0033.scaffold00127 100785 1 T A scaffold10629 Both SNP 0033.scaffold00127 100811 1 G A scaffold10629 Both SNP 0033.scaffold00127 100847 1 C T scaffold10629 Both SNP 0033.scaffold00127 100856 1 C T scaffold10629 ScafM INDEL 0033.scaffold00127 100958 9 GGCCCAAAA ......... scaffold10629 ScafM INDEL 0033.scaffold00127 100995 2 AC .G scaffold10629 ReadM SNP 0033.scaffold00127 101080 1 G T - ReadM SNP 0033.scaffold00127 101205 1 A G - ReadM SNP 0033.scaffold00127 101217 1 T C - Both SNP 0033.scaffold00127 101454 1 T A scaffold10629 Both SNP 0033.scaffold00127 101500 1 G T scaffold10629 Both SNP 0033.scaffold00127 101514 1 G A scaffold10629 Both INDEL 0033.scaffold00127 101611 1 A . scaffold10629 ReadM SNP 0033.scaffold00127 101635 1 G A - ReadM SNP 0033.scaffold00127 101650 1 T C - ReadM INDEL 0033.scaffold00127 101792 1 T . - ReadM SNP 0033.scaffold00127 101830 1 C T - ReadM SNP 0033.scaffold00127 101856 1 C T - ReadM INDEL 0033.scaffold00127 101867 1 . G - Both SNP 0033.scaffold00127 101978 1 A G scaffold10629 ScafM INDEL 0033.scaffold00127 102077 8 AGGCACCA ........ scaffold10629 ScafM INDEL 0033.scaffold00127 102223 8 ACTATGCA ........ scaffold10629 ScafM SNP 0033.scaffold00127 102265 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 102314 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 102326 1 A C scaffold10629 ScafM INDEL 0033.scaffold00127 102381 1 . T scaffold10629 ScafM SNP 0033.scaffold00127 102533 1 G A scaffold10629 ScafM INDEL 0033.scaffold00127 102544 8 TAGGAGAC ........ scaffold10629 ScafM INDEL 0033.scaffold00127 102559 7 TATTGAG ....... scaffold10629 ScafM SNP 0033.scaffold00127 102637 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 102725 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 102759 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 102762 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 102774 1 A C scaffold10629 ScafM INDEL 0033.scaffold00127 102799 1 . T scaffold10629 ScafM SNP 0033.scaffold00127 102824 1 G C scaffold10629 ScafM INDEL 0033.scaffold00127 102859 2 AA .. scaffold10629 ScafM INDEL 0033.scaffold00127 102863 1 G . scaffold10629 ScafM INDEL 0033.scaffold00127 102866 10 AAAAGTATTA .......... scaffold10629 ScafM INDEL 0033.scaffold00127 102897 2 .. AA scaffold10629 ScafM SNP 0033.scaffold00127 102901 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 102928 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 102933 1 A T scaffold10629 ScafM SNP 0033.scaffold00127 102941 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 102952 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 102984 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 103781 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 103791 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 103794 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 103902 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 103935 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 104021 1 C G scaffold10629 ScafM SNP 0033.scaffold00127 104050 1 G C scaffold10629 ScafM SNP 0033.scaffold00127 104052 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 104084 1 T A scaffold10629 Both SNP 0033.scaffold00127 104102 1 T G scaffold10629 Both SNP 0033.scaffold00127 104110 1 G C scaffold10629 ScafM SNP 0033.scaffold00127 104238 2 GT TG scaffold10629 ReadM SNP 0033.scaffold00127 104920 1 A G - Both INDEL 0033.scaffold00127 105035 2 TT .. scaffold10629 ScafM INDEL 0033.scaffold00127 105218 8 ACTAAAAC ........ scaffold10629 ScafM SNP 0033.scaffold00127 105275 1 C T scaffold10629 ScafM INDEL 0033.scaffold00127 105307 3 ... AAT scaffold10629 ScafM INDEL 0033.scaffold00127 105397 3 ... TGT scaffold10629 Both SNP 0033.scaffold00127 105450 1 A C scaffold10629 Both INDEL 0033.scaffold00127 105526 1 A . scaffold10629 Both SNP 0033.scaffold00127 105533 1 T A scaffold10629 ScafM INDEL 0033.scaffold00127 105567 7 ....... TCAATAA scaffold10629 Both INDEL 0033.scaffold00127 105588 1 . A scaffold10629 Both SNP 0033.scaffold00127 105743 1 T C scaffold10629 ScafM INDEL 0033.scaffold00127 106561 7 TTGTGTT ....... scaffold10629 ScafM INDEL 0033.scaffold00127 106611 1 T . scaffold10629 ScafM INDEL 0033.scaffold00127 106675 6 ...... ATATAT scaffold10629 ScafM SNP 0033.scaffold00127 106778 1 A G scaffold10629 Both SNP 0033.scaffold00127 106902 1 A G scaffold10629 Both SNP 0033.scaffold00127 107101 1 C T scaffold10629 ScafM INDEL 0033.scaffold00127 107113 1 A . scaffold10629 Both SNP 0033.scaffold00127 107179 1 T C scaffold10629 ScafM INDEL 0033.scaffold00127 107195 1 . A scaffold10629 ScafM SNP 0033.scaffold00127 107254 2 TT CG scaffold10629 ScafM INDEL 0033.scaffold00127 107277 1 T . scaffold10629 ScafM SNP 0033.scaffold00127 107290 1 A T scaffold10629 ScafM INDEL 0033.scaffold00127 107314 5 ..... AAAAA scaffold10629 ScafM SNP 0033.scaffold00127 107315 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 107322 1 T A scaffold10629 ScafM INDEL 0033.scaffold00127 107323 1 . T scaffold10629 ScafM SNP 0033.scaffold00127 107358 2 TT CG scaffold10629 ScafM INDEL 0033.scaffold00127 107412 2 .. AA scaffold10629 ScafM SNP 0033.scaffold00127 108079 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 108121 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 108124 1 A G scaffold10629 ScafM INDEL 0033.scaffold00127 108154 1 . A scaffold10629 ReadM SNP 0033.scaffold00127 108553 1 G A - Both SNP 0033.scaffold00127 108672 1 T C scaffold10629 Both SNP 0033.scaffold00127 108717 1 T A scaffold10629 ReadM SNP 0033.scaffold00127 108838 1 G A - ReadM SNP 0033.scaffold00127 108874 1 A T - ReadM SNP 0033.scaffold00127 108890 1 A C - ReadM SNP 0033.scaffold00127 108953 1 G A - ReadM SNP 0033.scaffold00127 109116 1 T C - ReadM SNP 0033.scaffold00127 109176 1 C T - ReadM SNP 0033.scaffold00127 109258 1 C T - ReadM SNP 0033.scaffold00127 109266 1 G A - ReadM SNP 0033.scaffold00127 109310 1 A T - ReadM SNP 0033.scaffold00127 109323 1 C G - ReadM SNP 0033.scaffold00127 109361 1 A G - ReadM SNP 0033.scaffold00127 109562 1 C A - Both INDEL 0033.scaffold00127 109679 1 T . scaffold10629 Both SNP 0033.scaffold00127 109690 1 T A scaffold10629 Both SNP 0033.scaffold00127 109707 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 109779 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 109796 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 109948 1 A C scaffold10629 ScafM SNP 0033.scaffold00127 115278 1 G T scaffold4218 ScafM SNP 0033.scaffold00127 115282 2 TT CC scaffold4218 ScafM SNP 0033.scaffold00127 115289 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115293 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 115295 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115299 2 CA TT scaffold4218 ScafM SNP 0033.scaffold00127 115304 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115313 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115319 2 TG CA scaffold4218 ScafM SNP 0033.scaffold00127 115325 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115334 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115337 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115343 3 CAC GGT scaffold4218 ScafM SNP 0033.scaffold00127 115356 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115358 1 G T scaffold4218 ScafM SNP 0033.scaffold00127 115364 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115367 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115371 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115373 1 T G scaffold4218 ScafM SNP 0033.scaffold00127 115379 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115382 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115391 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 115403 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115406 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115410 2 AA TG scaffold4218 ScafM SNP 0033.scaffold00127 115418 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115424 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115435 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115439 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115454 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115475 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115480 1 G T scaffold4218 ScafM SNP 0033.scaffold00127 115484 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115490 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115493 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115498 2 GC AT scaffold4218 ScafM INDEL 0033.scaffold00127 115518 1 A . scaffold4218 ScafM INDEL 0033.scaffold00127 115523 2 .A GG scaffold4218 ScafM SNP 0033.scaffold00127 115526 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115541 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115556 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115559 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115565 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115574 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115577 1 C T scaffold4218 ScafM INDEL 0033.scaffold00127 115594 1 . G scaffold4218 ScafM INDEL 0033.scaffold00127 115597 1 A . scaffold4218 ScafM SNP 0033.scaffold00127 115601 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115605 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115607 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115610 2 TA CC scaffold4218 ScafM SNP 0033.scaffold00127 115613 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115620 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115623 3 ACA GTG scaffold4218 ScafM INDEL 0033.scaffold00127 115628 2 GC .A scaffold4218 ScafM INDEL 0033.scaffold00127 115631 1 . A scaffold4218 ScafM SNP 0033.scaffold00127 115637 1 C G scaffold4218 ScafM SNP 0033.scaffold00127 115643 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115646 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115649 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115652 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 115656 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115658 1 G C scaffold4218 ScafM SNP 0033.scaffold00127 115676 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115680 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115682 2 CT TC scaffold4218 ScafM SNP 0033.scaffold00127 115712 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115715 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 115718 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115727 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115730 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115733 1 G C scaffold4218 ScafM SNP 0033.scaffold00127 115739 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 115745 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115751 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 115767 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115785 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115792 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115794 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115796 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115802 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115806 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115808 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 115811 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 115817 2 TC GT scaffold4218 ScafM SNP 0033.scaffold00127 115833 1 G T scaffold4218 ScafM SNP 0033.scaffold00127 115839 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 115847 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115865 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115877 2 AA GG scaffold4218 ScafM SNP 0033.scaffold00127 115882 1 G A scaffold4218 ScafM SNP 0033.scaffold00127 115886 2 GG CT scaffold4218 ScafM SNP 0033.scaffold00127 115889 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115893 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 115897 2 GG AA scaffold4218 ScafM SNP 0033.scaffold00127 115900 2 CA AC scaffold4218 ScafM SNP 0033.scaffold00127 115908 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115911 2 AG GC scaffold4218 ScafM INDEL 0033.scaffold00127 115916 2 TG .C scaffold4218 ScafM INDEL 0033.scaffold00127 115920 1 . C scaffold4218 ScafM SNP 0033.scaffold00127 115923 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 115925 1 T A scaffold4218 ScafM INDEL 0033.scaffold00127 115926 1 . A scaffold4218 ScafM SNP 0033.scaffold00127 115928 1 C T scaffold4218 ScafM INDEL 0033.scaffold00127 115930 3 AGT .TC scaffold4218 ScafM SNP 0033.scaffold00127 115939 1 A C scaffold4218 ScafM SNP 0033.scaffold00127 115943 3 TCC AAA scaffold4218 ScafM SNP 0033.scaffold00127 115956 3 ACT GTA scaffold4218 ScafM SNP 0033.scaffold00127 115960 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115963 2 GC AA scaffold4218 ScafM SNP 0033.scaffold00127 115974 2 TC GT scaffold4218 ScafM SNP 0033.scaffold00127 115979 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 115988 1 T G scaffold4218 ScafM SNP 0033.scaffold00127 115993 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 115997 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 116001 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116010 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 116012 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116023 2 CA TT scaffold4218 ScafM SNP 0033.scaffold00127 116030 1 C G scaffold4218 ScafM SNP 0033.scaffold00127 116032 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116036 1 C A scaffold4218 ScafM SNP 0033.scaffold00127 116039 1 T A scaffold4218 ScafM SNP 0033.scaffold00127 116042 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 116044 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116048 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116051 1 G T scaffold4218 ScafM SNP 0033.scaffold00127 116061 4 CTTT AACC scaffold4218 ScafM SNP 0033.scaffold00127 116085 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 116087 1 C T scaffold4218 ScafM SNP 0033.scaffold00127 116090 2 TT AC scaffold4218 ScafM SNP 0033.scaffold00127 116093 1 T C scaffold4218 ScafM SNP 0033.scaffold00127 116102 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 116111 1 A G scaffold4218 ScafM SNP 0033.scaffold00127 116114 1 A T scaffold4218 ScafM SNP 0033.scaffold00127 116118 2 AC CA scaffold4218 ScafM SNP 0033.scaffold00127 120560 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 120625 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 120627 1 G A scaffold10629 ScafM INDEL 0033.scaffold00127 120649 3 TTA ... scaffold10629 ScafM INDEL 0033.scaffold00127 120742 1 G . scaffold10629 ScafM SNP 0033.scaffold00127 120983 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 121049 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 121052 1 G A scaffold10629 ScafM INDEL 0033.scaffold00127 121062 3 ... ATA scaffold10629 ScafM INDEL 0033.scaffold00127 121177 4 .... CAAG scaffold10629 ScafM INDEL 0033.scaffold00127 121235 2 AT .. scaffold10629 ScafM INDEL 0033.scaffold00127 121239 3 ATC ... scaffold10629 ScafM SNP 0033.scaffold00127 121245 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 123479 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 123494 1 T G scaffold10629 ScafM INDEL 0033.scaffold00127 123549 2 .T GA scaffold10629 ScafM SNP 0033.scaffold00127 123580 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 123600 2 CG GC scaffold10629 ScafM INDEL 0033.scaffold00127 123617 2 AG .. scaffold10629 ScafM SNP 0033.scaffold00127 123633 1 A C scaffold10629 Both SNP 0033.scaffold00127 123851 1 T G scaffold10629 Both SNP 0033.scaffold00127 123929 1 G A scaffold10629 Both SNP 0033.scaffold00127 123992 1 G C scaffold10629 Both SNP 0033.scaffold00127 124031 1 G A scaffold10629 Both SNP 0033.scaffold00127 124142 1 T C scaffold10629 Both SNP 0033.scaffold00127 124256 1 T A scaffold10629 Both SNP 0033.scaffold00127 124328 1 C T scaffold10629 Both SNP 0033.scaffold00127 124330 1 A C scaffold10629 Both SNP 0033.scaffold00127 124484 1 T G scaffold10629 Both INDEL 0033.scaffold00127 124527 1 A . scaffold10629 ScafM SNP 0033.scaffold00127 124530 2 TT CC scaffold10629 Both SNP 0033.scaffold00127 124621 1 G A scaffold10629 Both SNP 0033.scaffold00127 124647 1 A C scaffold10629 Both SNP 0033.scaffold00127 124658 1 T G scaffold10629 ScafM INDEL 0033.scaffold00127 124683 4 .... ATAT scaffold10629 ScafM INDEL 0033.scaffold00127 124699 1 . T scaffold10629 ScafM SNP 0033.scaffold00127 124703 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 124711 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 124718 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 124733 1 G A scaffold10629 Both SNP 0033.scaffold00127 124755 1 G A scaffold10629 Both INDEL 0033.scaffold00127 124806 1 . T scaffold10629 ScafM INDEL 0033.scaffold00127 124839 1 . A scaffold10629 ScafM SNP 0033.scaffold00127 124860 1 A T scaffold10629 ScafM SNP 0033.scaffold00127 124883 1 A T scaffold10629 ScafM SNP 0033.scaffold00127 124885 1 C T scaffold10629 ScafM INDEL 0033.scaffold00127 124886 2 .. GA scaffold10629 Both SNP 0033.scaffold00127 124909 1 G A scaffold10629 Both SNP 0033.scaffold00127 124930 1 A G scaffold10629 Both SNP 0033.scaffold00127 124954 1 A G scaffold10629 Both SNP 0033.scaffold00127 125016 1 A T scaffold10629 Both SNP 0033.scaffold00127 125034 1 A G scaffold10629 Both SNP 0033.scaffold00127 125136 1 G A scaffold10629 Both SNP 0033.scaffold00127 125185 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 125205 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 125222 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 125226 1 C A scaffold10629 ScafM INDEL 0033.scaffold00127 125228 1 A . scaffold10629 Both SNP 0033.scaffold00127 125249 1 T C scaffold10629 Both SNP 0033.scaffold00127 125260 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 125443 2 AG TA scaffold10629 Both INDEL 0033.scaffold00127 125567 1 . A scaffold10629 Both SNP 0033.scaffold00127 125579 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 125594 1 A C scaffold10629 ScafM SNP 0033.scaffold00127 125841 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 125854 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 125866 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 125870 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 125905 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 125916 2 AT GA scaffold10629 ScafM SNP 0033.scaffold00127 125935 1 A C scaffold10629 ReadM INDEL 0033.scaffold00127 125987 1 . A - ScafM INDEL 0033.scaffold00127 125987 2 .G AA scaffold10629 Both SNP 0033.scaffold00127 126028 1 G C scaffold10629 Both SNP 0033.scaffold00127 126061 1 G A scaffold10629 Both SNP 0033.scaffold00127 126067 1 A T scaffold10629 Both SNP 0033.scaffold00127 126204 1 G C scaffold10629 Both SNP 0033.scaffold00127 126211 1 G A scaffold10629 Both SNP 0033.scaffold00127 126224 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 126277 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 126321 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 126326 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 126344 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 126369 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 126379 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 126438 1 A G scaffold10629 Both SNP 0033.scaffold00127 126512 1 A T scaffold10629 ScafM INDEL 0033.scaffold00127 126583 1 . A scaffold10629 ScafM INDEL 0033.scaffold00127 126594 2 .. AA scaffold10629 ScafM INDEL 0033.scaffold00127 126625 5 TTTCT ..... scaffold10629 ScafM SNP 0033.scaffold00127 126636 1 G A scaffold10629 Both SNP 0033.scaffold00127 126655 1 G A scaffold10629 Both SNP 0033.scaffold00127 126685 1 C G scaffold10629 ReadM INDEL 0033.scaffold00127 126749 1 . T - Both SNP 0033.scaffold00127 127065 1 A C scaffold10629 Both SNP 0033.scaffold00127 127073 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 127096 1 C T scaffold10629 ScafM SNP 0033.scaffold00127 127100 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 127116 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 127137 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 127140 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 127143 2 AA TT scaffold10629 Both SNP 0033.scaffold00127 127167 1 A G scaffold10629 Both SNP 0033.scaffold00127 127182 1 G T scaffold10629 Both SNP 0033.scaffold00127 127249 1 G A scaffold10629 Both SNP 0033.scaffold00127 127314 1 G A scaffold10629 Both SNP 0033.scaffold00127 127333 1 T C scaffold10629 Both SNP 0033.scaffold00127 127343 1 T C scaffold10629 Both SNP 0033.scaffold00127 127409 1 A C scaffold10629 Both SNP 0033.scaffold00127 127424 1 A T scaffold10629 Both SNP 0033.scaffold00127 127451 1 C T scaffold10629 Both SNP 0033.scaffold00127 127455 1 C T scaffold10629 Both SNP 0033.scaffold00127 127471 1 C T scaffold10629 Both SNP 0033.scaffold00127 127546 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 127561 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 127563 1 T A scaffold10629 ScafM SNP 0033.scaffold00127 127565 1 T G scaffold10629 ScafM SNP 0033.scaffold00127 127579 1 T C scaffold10629 ScafM SNP 0033.scaffold00127 127628 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 127646 2 CT TC scaffold10629 ScafM SNP 0033.scaffold00127 127649 1 C A scaffold10629 Both SNP 0033.scaffold00127 127664 1 T G scaffold10629 Both SNP 0033.scaffold00127 127666 1 A G scaffold10629 Both SNP 0033.scaffold00127 127768 1 T A scaffold10629 Both SNP 0033.scaffold00127 127787 1 T C scaffold10629 Both SNP 0033.scaffold00127 127789 1 G A scaffold10629 Both SNP 0033.scaffold00127 127802 1 A C scaffold10629 Both SNP 0033.scaffold00127 128025 1 G A scaffold10629 Both SNP 0033.scaffold00127 128048 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 128165 1 G T scaffold10629 Both SNP 0033.scaffold00127 128239 1 G A scaffold10629 ScafM INDEL 0033.scaffold00127 128265 22 ...................... TTTATGGTGAAAGTTGAAACTC scaffold10629 ScafM SNP 0033.scaffold00127 128274 2 GC AT scaffold10629 Both SNP 0033.scaffold00127 128460 1 A G scaffold10629 Both SNP 0033.scaffold00127 128522 1 G C scaffold10629 Both SNP 0033.scaffold00127 128551 1 A G scaffold10629 Both SNP 0033.scaffold00127 128573 1 C T scaffold10629 Both SNP 0033.scaffold00127 128611 1 C T scaffold10629 Both SNP 0033.scaffold00127 128637 1 C T scaffold10629 Both INDEL 0033.scaffold00127 128701 1 T . scaffold10629 Both SNP 0033.scaffold00127 128731 1 A T scaffold10629 Both SNP 0033.scaffold00127 128913 1 A G scaffold10629 Both SNP 0033.scaffold00127 128966 1 G A scaffold10629 Both SNP 0033.scaffold00127 128975 1 T C scaffold10629 Both SNP 0033.scaffold00127 128996 1 G T scaffold10629 Both SNP 0033.scaffold00127 129004 1 A G scaffold10629 Both SNP 0033.scaffold00127 129066 1 G T scaffold10629 ReadM SNP 0033.scaffold00127 129099 1 T G - ReadM SNP 0033.scaffold00127 129134 1 A T - ReadM SNP 0033.scaffold00127 129155 1 A G - ReadM SNP 0033.scaffold00127 129235 1 G A - ReadM SNP 0033.scaffold00127 129301 1 A C - ReadM SNP 0033.scaffold00127 129365 1 G A - ReadM SNP 0033.scaffold00127 129468 1 A G - ScafM INDEL 0033.scaffold00127 129618 8 GGGAAAGG .......T scaffold10629 Both SNP 0033.scaffold00127 129660 1 A C scaffold10629 Both SNP 0033.scaffold00127 129669 1 T G scaffold10629 ReadM SNP 0033.scaffold00127 129764 1 A G - ReadM SNP 0033.scaffold00127 129799 1 C G - ReadM SNP 0033.scaffold00127 129831 1 G A - ScafM SNP 0033.scaffold00127 129856 1 G T scaffold45107 ScafM SNP 0033.scaffold00127 129872 1 A T scaffold45107 ScafM INDEL 0033.scaffold00127 129875 1 . C scaffold45107 ScafM SNP 0033.scaffold00127 129910 1 T G scaffold45107 ScafM SNP 0033.scaffold00127 129929 1 G A scaffold45107 ScafM SNP 0033.scaffold00127 129932 1 T G scaffold45107 ScafM SNP 0033.scaffold00127 129953 2 CA GT scaffold45107 ReadM SNP 0033.scaffold00127 129954 1 A T - ScafM SNP 0033.scaffold00127 129967 1 A T scaffold45107 ScafM SNP 0033.scaffold00127 129979 1 A G scaffold45107 ScafM INDEL 0033.scaffold00127 129983 1 . G scaffold45107 ScafM SNP 0033.scaffold00127 129992 1 A G scaffold45107 ScafM SNP 0033.scaffold00127 129999 1 G C scaffold45107 ScafM SNP 0033.scaffold00127 130007 1 G C scaffold45107 ScafM INDEL 0033.scaffold00127 130033 2 TT .G scaffold45107 Both SNP 0033.scaffold00127 130209 1 G A scaffold10629 ScafM SNP 0033.scaffold00127 130255 1 G T scaffold10629 ScafM SNP 0033.scaffold00127 130260 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 130263 1 A G scaffold10629 ScafM SNP 0033.scaffold00127 131905 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 131929 1 G T scaffold66143 ScafM SNP 0033.scaffold00127 131933 1 C T scaffold66143 ScafM INDEL 0033.scaffold00127 131948 2 TT .. scaffold66143 ScafM SNP 0033.scaffold00127 131956 1 T G scaffold66143 ScafM SNP 0033.scaffold00127 132011 1 T G scaffold66143 ScafM SNP 0033.scaffold00127 132017 1 A G scaffold66143 ScafM INDEL 0033.scaffold00127 132029 1 T . scaffold66143 ScafM SNP 0033.scaffold00127 132031 2 TT CC scaffold66143 ScafM SNP 0033.scaffold00127 132038 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 132054 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 132092 2 TG CA scaffold66143 ScafM SNP 0033.scaffold00127 132127 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 132145 2 AG CA scaffold66143 ScafM SNP 0033.scaffold00127 132150 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 132153 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 132548 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 132559 1 A G scaffold66143 ScafM INDEL 0033.scaffold00127 132565 4 GGGC .... scaffold66143 ScafM SNP 0033.scaffold00127 132610 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 132618 2 CG GA scaffold66143 ScafM SNP 0033.scaffold00127 132658 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 132666 1 T A scaffold66143 ScafM INDEL 0033.scaffold00127 132701 1 . A scaffold66143 ScafM SNP 0033.scaffold00127 132714 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 132908 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 132920 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 132924 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 132930 2 CT TA scaffold66143 ScafM SNP 0033.scaffold00127 132953 1 C G scaffold66143 ScafM SNP 0033.scaffold00127 132959 1 A G scaffold66143 ScafM INDEL 0033.scaffold00127 132964 4 .... GAGT scaffold66143 ScafM SNP 0033.scaffold00127 132989 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 133005 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 133026 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 133031 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 133280 3 GCC ATT scaffold66143 ScafM SNP 0033.scaffold00127 133284 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 133287 1 T C scaffold66143 ScafM INDEL 0033.scaffold00127 133318 7 GGTCAAA ....... scaffold66143 ScafM SNP 0033.scaffold00127 133335 1 T A scaffold66143 ScafM SNP 0033.scaffold00127 133357 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 133361 1 A T scaffold66143 ScafM SNP 0033.scaffold00127 133367 1 A T scaffold66143 ScafM SNP 0033.scaffold00127 133384 2 TG AA scaffold66143 ScafM SNP 0033.scaffold00127 133456 1 T C scaffold66143 ScafM INDEL 0033.scaffold00127 133544 2 AT .. scaffold66143 ScafM INDEL 0033.scaffold00127 133550 2 AA .. scaffold66143 ScafM INDEL 0033.scaffold00127 133555 5 CTACG ..... scaffold66143 ScafM INDEL 0033.scaffold00127 133562 3 CTA ... scaffold66143 ScafM INDEL 0033.scaffold00127 133568 3 CGA ... scaffold66143 ScafM INDEL 0033.scaffold00127 133572 2 CC .. scaffold66143 ScafM INDEL 0033.scaffold00127 133576 4 CTTG .... scaffold66143 ScafM SNP 0033.scaffold00127 133582 2 TA AC scaffold66143 ScafM SNP 0033.scaffold00127 133596 1 T G scaffold66143 ScafM SNP 0033.scaffold00127 133639 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 133653 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 133713 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 133736 1 G T scaffold66143 ScafM SNP 0033.scaffold00127 133741 1 T A scaffold66143 ScafM INDEL 0033.scaffold00127 133747 1 C . scaffold66143 ScafM SNP 0033.scaffold00127 136863 1 T A scaffold66143 ScafM SNP 0033.scaffold00127 136908 1 T G scaffold66143 ScafM SNP 0033.scaffold00127 136925 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 136933 2 AA TT scaffold66143 ScafM INDEL 0033.scaffold00127 136970 3 ATT ... scaffold66143 ScafM SNP 0033.scaffold00127 136984 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 137452 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 137486 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 137506 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 137511 1 A C scaffold66143 ScafM SNP 0033.scaffold00127 137743 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 137763 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 137801 1 A C scaffold66143 ScafM SNP 0033.scaffold00127 137807 1 A G scaffold66143 ScafM INDEL 0033.scaffold00127 137830 3 TTC ... scaffold66143 ScafM SNP 0033.scaffold00127 137844 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 137876 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 137880 1 G A scaffold66143 ScafM SNP 0033.scaffold00127 137945 1 A T scaffold66143 ScafM SNP 0033.scaffold00127 137958 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 137961 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 138077 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 138174 1 A T scaffold66143 ScafM SNP 0033.scaffold00127 138249 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 138337 1 T C scaffold66143 ScafM SNP 0033.scaffold00127 138382 1 G T scaffold66143 ScafM SNP 0033.scaffold00127 138408 1 C T scaffold66143 ScafM SNP 0033.scaffold00127 138419 1 A G scaffold66143 ScafM SNP 0033.scaffold00127 138439 2 GG AA scaffold66143 ScafM INDEL 0033.scaffold00127 138451 1 . A scaffold66143 ScafM SNP 0033.scaffold00127 138458 1 A G scaffold66143 ReadM SNP 0033.scaffold00127 139391 1 T C - ReadM SNP 0033.scaffold00127 139453 1 G A - ReadM SNP 0033.scaffold00127 139511 1 A C - ReadM SNP 0033.scaffold00127 139729 1 C T - ReadM SNP 0033.scaffold00127 139779 1 T A - ReadM SNP 0033.scaffold00127 139835 1 T A - ReadM SNP 0033.scaffold00127 139884 1 T C - ReadM SNP 0033.scaffold00127 139901 1 C A - ReadM SNP 0033.scaffold00127 139956 1 C A - ReadM SNP 0033.scaffold00127 140071 1 C T - ScafM INDEL 0033.scaffold00127 140553 2 TT .. scaffold32183 ScafM SNP 0033.scaffold00127 140558 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 140575 1 G A scaffold32183 ScafM SNP 0033.scaffold00127 140614 1 A T scaffold32183 ScafM SNP 0033.scaffold00127 140620 1 A G scaffold32183 ScafM SNP 0033.scaffold00127 140646 1 G A scaffold32183 ScafM SNP 0033.scaffold00127 140820 1 A G scaffold32183 ScafM SNP 0033.scaffold00127 140854 1 A G scaffold32183 ScafM SNP 0033.scaffold00127 140857 1 T G scaffold32183 ScafM SNP 0033.scaffold00127 140964 1 A T scaffold32183 ScafM SNP 0033.scaffold00127 140987 1 T C scaffold32183 ScafM SNP 0033.scaffold00127 140990 1 G A scaffold32183 Both SNP 0033.scaffold00127 141085 1 T A scaffold32183 Both SNP 0033.scaffold00127 141154 1 A G scaffold32183 Both SNP 0033.scaffold00127 141168 1 C T scaffold32183 Both SNP 0033.scaffold00127 141326 1 G C scaffold32183 Both SNP 0033.scaffold00127 141389 1 C T scaffold32183 Both SNP 0033.scaffold00127 141410 1 T A scaffold32183 ScafM INDEL 0033.scaffold00127 141447 1 . A scaffold32183 ScafM SNP 0033.scaffold00127 141465 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 141478 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 141484 1 A T scaffold32183 ScafM INDEL 0033.scaffold00127 141490 2 TT .. scaffold32183 ScafM SNP 0033.scaffold00127 141497 1 A T scaffold32183 ScafM SNP 0033.scaffold00127 141519 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 141524 1 A G scaffold32183 ScafM SNP 0033.scaffold00127 141534 2 AG GT scaffold32183 Both SNP 0033.scaffold00127 141638 1 A G scaffold32183 Both SNP 0033.scaffold00127 141640 1 A G scaffold32183 ScafM SNP 0033.scaffold00127 141674 1 G A scaffold32183 ScafM INDEL 0033.scaffold00127 141685 6 AATATA ...... scaffold32183 ScafM INDEL 0033.scaffold00127 141694 5 ACTTC ..... scaffold32183 ScafM INDEL 0033.scaffold00127 141700 3 ATA ... scaffold32183 ScafM INDEL 0033.scaffold00127 141704 1 G . scaffold32183 ScafM INDEL 0033.scaffold00127 141707 2 TT .C scaffold32183 ScafM INDEL 0033.scaffold00127 141711 1 A . scaffold32183 ScafM INDEL 0033.scaffold00127 141716 1 A . scaffold32183 ScafM INDEL 0033.scaffold00127 141718 1 A . scaffold32183 ScafM INDEL 0033.scaffold00127 141720 1 T . scaffold32183 ScafM INDEL 0033.scaffold00127 141723 12 TGGTTTTTGGTT ............ scaffold32183 ScafM INDEL 0033.scaffold00127 141738 3 CTT .AA scaffold32183 ScafM SNP 0033.scaffold00127 141743 1 A T scaffold32183 ScafM INDEL 0033.scaffold00127 141745 2 AG .. scaffold32183 ScafM INDEL 0033.scaffold00127 141748 1 G . scaffold32183 ScafM INDEL 0033.scaffold00127 141751 2 AA .T scaffold32183 ScafM SNP 0033.scaffold00127 141755 2 TC GG scaffold32183 ScafM SNP 0033.scaffold00127 141764 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 141793 1 C A scaffold32183 ScafM SNP 0033.scaffold00127 141803 1 T G scaffold32183 ScafM SNP 0033.scaffold00127 141808 1 C G scaffold32183 ScafM SNP 0033.scaffold00127 141824 1 T C scaffold32183 ScafM SNP 0033.scaffold00127 141875 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 141888 1 T G scaffold32183 ScafM SNP 0033.scaffold00127 141893 1 C G scaffold32183 ScafM SNP 0033.scaffold00127 141904 1 A T scaffold32183 Both SNP 0033.scaffold00127 141925 1 T C scaffold32183 ScafM SNP 0033.scaffold00127 142022 1 T C scaffold32183 ScafM SNP 0033.scaffold00127 142029 1 G C scaffold32183 Both SNP 0033.scaffold00127 142052 1 C A scaffold32183 Both SNP 0033.scaffold00127 142130 1 C A scaffold32183 ScafM INDEL 0033.scaffold00127 142290 1 . T scaffold32183 ReadM SNP 0033.scaffold00127 142327 1 A C - ReadM SNP 0033.scaffold00127 142354 1 G A - ReadM SNP 0033.scaffold00127 142402 1 T G - Both INDEL 0033.scaffold00127 142549 1 T . scaffold32183 Both SNP 0033.scaffold00127 142573 1 A T scaffold32183 Both SNP 0033.scaffold00127 142611 1 A G scaffold32183 Both SNP 0033.scaffold00127 142663 1 G A scaffold32183 Both SNP 0033.scaffold00127 142672 1 C T scaffold32183 Both SNP 0033.scaffold00127 142675 1 A C scaffold32183 ScafM SNP 0033.scaffold00127 142899 1 G C scaffold32183 ReadM SNP 0033.scaffold00127 143111 1 A C - ReadM SNP 0033.scaffold00127 143119 1 T C - Both SNP 0033.scaffold00127 143259 1 T C scaffold32183 Both SNP 0033.scaffold00127 143329 1 G C scaffold32183 Both SNP 0033.scaffold00127 143339 1 T C scaffold32183 ReadM SNP 0033.scaffold00127 143356 1 C A - ScafM INDEL 0033.scaffold00127 143621 6 CTTGCC ...... scaffold32183 ScafM SNP 0033.scaffold00127 143688 1 T G scaffold32183 ScafM INDEL 0033.scaffold00127 143730 27 ........................... ACATTATGCATGGGTATATCTGTATAT scaffold32183 ScafM INDEL 0033.scaffold00127 143731 1 . A scaffold32183 ScafM SNP 0033.scaffold00127 143767 1 C T scaffold32183 ScafM SNP 0033.scaffold00127 143889 1 T C scaffold32183 ScafM INDEL 0033.scaffold00127 146196 1 . T scaffold28149 ScafM SNP 0033.scaffold00127 146202 1 C T scaffold28149 ScafM SNP 0033.scaffold00127 146239 1 A T scaffold28149 ScafM SNP 0033.scaffold00127 146242 1 A T scaffold28149 ScafM INDEL 0033.scaffold00127 146246 4 .TTT AAAA scaffold28149 ScafM SNP 0033.scaffold00127 146261 1 C T scaffold28149 ScafM SNP 0033.scaffold00127 146266 1 A T scaffold28149 ScafM INDEL 0033.scaffold00127 146268 1 T . scaffold28149 ScafM INDEL 0033.scaffold00127 146322 3 CAC ... scaffold28149 ScafM SNP 0033.scaffold00127 148113 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 148123 1 A T scaffold8280 ScafM INDEL 0033.scaffold00127 148140 2 .. GA scaffold8280 ScafM INDEL 0033.scaffold00127 148141 10 .......... AAGATAATTA scaffold8280 ScafM INDEL 0033.scaffold00127 148143 9 ......... TAAAAATAA scaffold8280 ScafM SNP 0033.scaffold00127 148236 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 148239 2 TA AG scaffold8280 ScafM INDEL 0033.scaffold00127 148245 4 .... ATGT scaffold8280 ScafM INDEL 0033.scaffold00127 148256 1 . T scaffold8280 ReadM SNP 0033.scaffold00127 148287 1 T G - ReadM SNP 0033.scaffold00127 148306 1 A C - ReadM SNP 0033.scaffold00127 148354 1 A C - ReadM SNP 0033.scaffold00127 148422 1 T C - ReadM SNP 0033.scaffold00127 148459 1 C T - ReadM SNP 0033.scaffold00127 148524 1 A C - ReadM SNP 0033.scaffold00127 148538 1 G A - ReadM INDEL 0033.scaffold00127 148545 1 . T - ReadM INDEL 0033.scaffold00127 148716 2 CG .. - ReadM SNP 0033.scaffold00127 148840 1 T C - ReadM SNP 0033.scaffold00127 148878 1 T C - Both SNP 0033.scaffold00127 148919 1 C T scaffold8280 Both SNP 0033.scaffold00127 149005 1 C T scaffold8280 Both SNP 0033.scaffold00127 149034 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 149052 1 T G scaffold8280 ScafM INDEL 0033.scaffold00127 149055 1 . T scaffold8280 ScafM SNP 0033.scaffold00127 149095 1 C A scaffold8280 ScafM INDEL 0033.scaffold00127 149101 2 .. TA scaffold8280 ScafM SNP 0033.scaffold00127 149120 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 149142 1 A . scaffold8280 ScafM SNP 0033.scaffold00127 149144 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 149155 1 T C scaffold8280 Both INDEL 0033.scaffold00127 149189 1 A . scaffold8280 Both SNP 0033.scaffold00127 149215 1 A G scaffold8280 ReadM SNP 0033.scaffold00127 149254 1 T A - ReadM SNP 0033.scaffold00127 149274 1 G C - ReadM SNP 0033.scaffold00127 149291 1 T C - ReadM SNP 0033.scaffold00127 149337 1 A T - ReadM SNP 0033.scaffold00127 149384 1 G T - ReadM SNP 0033.scaffold00127 149414 1 G A - ReadM SNP 0033.scaffold00127 149437 1 G A - ReadM SNP 0033.scaffold00127 149456 1 A G - ReadM SNP 0033.scaffold00127 149631 1 G C - ReadM SNP 0033.scaffold00127 149643 1 G A - ReadM SNP 0033.scaffold00127 149802 1 T C - ReadM SNP 0033.scaffold00127 149814 1 G A - ReadM SNP 0033.scaffold00127 149868 1 A G - ReadM SNP 0033.scaffold00127 149873 1 C T - ReadM SNP 0033.scaffold00127 149892 1 G A - ReadM SNP 0033.scaffold00127 149957 1 G A - ReadM SNP 0033.scaffold00127 149959 1 T C - ReadM SNP 0033.scaffold00127 149977 1 T A - ReadM INDEL 0033.scaffold00127 150070 1 . A - ReadM SNP 0033.scaffold00127 150126 1 G T - ReadM SNP 0033.scaffold00127 150155 1 T C - ReadM SNP 0033.scaffold00127 150170 1 C G - ReadM SNP 0033.scaffold00127 150199 1 A G - ReadM SNP 0033.scaffold00127 150245 1 C T - ReadM SNP 0033.scaffold00127 150279 1 G A - ReadM SNP 0033.scaffold00127 150286 1 A G - ReadM SNP 0033.scaffold00127 150320 1 T C - ReadM SNP 0033.scaffold00127 150432 1 C T - ReadM SNP 0033.scaffold00127 150646 1 C T - Both SNP 0033.scaffold00127 150671 1 T G scaffold8280 Both SNP 0033.scaffold00127 150799 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 150826 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 150828 1 G C scaffold8280 Both SNP 0033.scaffold00127 150867 1 T C scaffold8280 Both SNP 0033.scaffold00127 150870 1 T C scaffold8280 Both SNP 0033.scaffold00127 150942 1 C T scaffold8280 Both SNP 0033.scaffold00127 150955 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 151019 20 ATGCGCGAAGCCTGTCTGAG .................... scaffold8280 Both SNP 0033.scaffold00127 151050 1 C T scaffold8280 ReadM SNP 0033.scaffold00127 151085 1 T C - ReadM SNP 0033.scaffold00127 151141 1 C T - ReadM SNP 0033.scaffold00127 151158 1 A G - ReadM SNP 0033.scaffold00127 151291 1 T G - Both SNP 0033.scaffold00127 151304 1 C T scaffold8280 Both SNP 0033.scaffold00127 151326 1 T A scaffold8280 Both SNP 0033.scaffold00127 151350 1 C T scaffold8280 ReadM SNP 0033.scaffold00127 151417 1 C G - ReadM SNP 0033.scaffold00127 151468 1 C T - ReadM SNP 0033.scaffold00127 151534 1 A G - ReadM SNP 0033.scaffold00127 151542 1 T G - ReadM SNP 0033.scaffold00127 151599 1 T C - ReadM SNP 0033.scaffold00127 151685 1 A G - ReadM SNP 0033.scaffold00127 151739 1 T A - ReadM SNP 0033.scaffold00127 151806 1 G A - ReadM SNP 0033.scaffold00127 151825 1 T C - ReadM SNP 0033.scaffold00127 151856 1 A G - ReadM SNP 0033.scaffold00127 151893 1 A G - ReadM SNP 0033.scaffold00127 151899 1 C T - ReadM SNP 0033.scaffold00127 151948 1 C T - ScafM SNP 0033.scaffold00127 154237 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 154239 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 154418 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 154483 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 154542 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 154560 1 C T scaffold8280 ScafM INDEL 0033.scaffold00127 182609 1 A . scaffold8280 ScafM SNP 0033.scaffold00127 182653 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 182780 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 182852 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 182900 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 183004 2 AG GA scaffold8280 Both SNP 0033.scaffold00127 183283 1 G A scaffold8280 Both SNP 0033.scaffold00127 183392 1 G A scaffold8280 Both SNP 0033.scaffold00127 183438 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 183565 4 .... TACA scaffold8280 Both SNP 0033.scaffold00127 183616 1 G A scaffold8280 Both INDEL 0033.scaffold00127 183658 1 . G scaffold8280 ScafM INDEL 0033.scaffold00127 183700 4 .... TATG scaffold8280 Both SNP 0033.scaffold00127 183786 1 T C scaffold8280 Both SNP 0033.scaffold00127 183819 1 G T scaffold8280 Both SNP 0033.scaffold00127 183894 1 C A scaffold8280 Both SNP 0033.scaffold00127 183967 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 184007 11 AGAAGTTAACA ........... scaffold8280 Both INDEL 0033.scaffold00127 184054 1 T . scaffold8280 ScafM SNP 0033.scaffold00127 184144 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 184149 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 184151 1 . A scaffold8280 ScafM SNP 0033.scaffold00127 184177 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 184187 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 184204 3 TAG ... scaffold8280 ScafM SNP 0033.scaffold00127 184214 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 184220 1 T A scaffold8280 ScafM INDEL 0033.scaffold00127 184224 1 T . scaffold8280 ScafM SNP 0033.scaffold00127 184230 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 184234 1 T A scaffold8280 Both SNP 0033.scaffold00127 184357 1 C T scaffold8280 ScafM INDEL 0033.scaffold00127 184366 7 ....... ATTTCGA scaffold8280 ReadM SNP 0033.scaffold00127 184463 1 A T - ScafM SNP 0033.scaffold00127 184693 2 TG CA scaffold8280 ScafM SNP 0033.scaffold00127 184709 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 184721 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 184725 7 ....... TTGCAAG scaffold8280 ScafM SNP 0033.scaffold00127 184736 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 184752 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 184786 1 A G scaffold8280 Both SNP 0033.scaffold00127 184825 1 T C scaffold8280 Both SNP 0033.scaffold00127 184852 1 T C scaffold8280 Both SNP 0033.scaffold00127 184862 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 184916 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 184931 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 184938 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 184940 1 A G scaffold8280 Both SNP 0033.scaffold00127 185012 1 G A scaffold8280 Both SNP 0033.scaffold00127 185029 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 185056 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 185063 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 185070 1 C A scaffold8280 Both SNP 0033.scaffold00127 185100 1 T C scaffold8280 Both SNP 0033.scaffold00127 185139 1 G A scaffold8280 ReadM INDEL 0033.scaffold00127 185444 1 . T - ReadM INDEL 0033.scaffold00127 185585 1 A . - ReadM SNP 0033.scaffold00127 185676 1 G A - ReadM SNP 0033.scaffold00127 185722 1 C T - Both SNP 0033.scaffold00127 185942 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 186015 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 186017 1 T G scaffold8280 ScafM INDEL 0033.scaffold00127 186069 2 TT .. scaffold8280 ScafM SNP 0033.scaffold00127 186074 2 CT AG scaffold8280 ReadM SNP 0033.scaffold00127 186128 1 T G - ReadM SNP 0033.scaffold00127 186205 1 T C - ReadM SNP 0033.scaffold00127 186256 1 C T - ReadM SNP 0033.scaffold00127 186297 1 C A - ReadM SNP 0033.scaffold00127 187139 1 T C - ReadM SNP 0033.scaffold00127 187183 1 C T - ReadM SNP 0033.scaffold00127 187187 1 C G - ReadM INDEL 0033.scaffold00127 187645 3 ... ATT - ReadM SNP 0033.scaffold00127 187867 1 T A - ReadM SNP 0033.scaffold00127 188260 1 A G - ReadM SNP 0033.scaffold00127 188463 1 A G - ReadM SNP 0033.scaffold00127 188642 1 T C - ReadM SNP 0033.scaffold00127 188656 1 T C - ReadM SNP 0033.scaffold00127 188740 1 G T - Both SNP 0033.scaffold00127 188888 1 C T scaffold8280 ScafM INDEL 0033.scaffold00127 189163 3 TAT ... scaffold8280 ReadM SNP 0033.scaffold00127 189315 1 T A - ReadM SNP 0033.scaffold00127 189593 1 T C - ReadM SNP 0033.scaffold00127 189841 1 G A - ReadM SNP 0033.scaffold00127 190011 1 A T - ReadM SNP 0033.scaffold00127 190015 1 C T - ReadM SNP 0033.scaffold00127 190043 1 C T - ReadM SNP 0033.scaffold00127 190584 1 A G - ReadM SNP 0033.scaffold00127 190624 1 T A - ReadM SNP 0033.scaffold00127 190967 1 G A - ReadM SNP 0033.scaffold00127 191156 1 A G - ReadM SNP 0033.scaffold00127 191337 1 T G - ReadM SNP 0033.scaffold00127 191631 1 C T - ReadM SNP 0033.scaffold00127 191660 1 A G - ReadM SNP 0033.scaffold00127 191688 1 C T - ReadM SNP 0033.scaffold00127 191711 1 G C - ReadM SNP 0033.scaffold00127 191769 1 G T - ReadM SNP 0033.scaffold00127 191785 1 C T - ReadM SNP 0033.scaffold00127 191798 1 A T - ReadM SNP 0033.scaffold00127 192067 1 A C - ReadM SNP 0033.scaffold00127 192077 1 A G - ReadM SNP 0033.scaffold00127 192122 1 G A - ReadM SNP 0033.scaffold00127 192168 1 G A - ReadM SNP 0033.scaffold00127 192317 1 T C - ReadM INDEL 0033.scaffold00127 192346 1 . T - ReadM SNP 0033.scaffold00127 192630 1 T C - ReadM SNP 0033.scaffold00127 192696 1 C T - ScafM SNP 0033.scaffold00127 193091 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 193098 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 193177 2 CA TT scaffold8280 Both SNP 0033.scaffold00127 193317 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 193397 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 193400 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 193423 1 T A scaffold8280 ScafM INDEL 0033.scaffold00127 193428 1 . T scaffold8280 ScafM SNP 0033.scaffold00127 193449 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 193501 1 C T scaffold8280 ScafM INDEL 0033.scaffold00127 193502 2 .C AA scaffold8280 ScafM SNP 0033.scaffold00127 193517 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 193520 3 .CC AAG scaffold8280 ScafM INDEL 0033.scaffold00127 193535 3 ... CTA scaffold8280 ScafM INDEL 0033.scaffold00127 193536 1 . T scaffold8280 ScafM SNP 0033.scaffold00127 193548 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 193612 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 194215 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 194221 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 194242 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 194245 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 194258 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 194263 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 194274 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 194276 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 194307 1 T G scaffold8280 ScafM INDEL 0033.scaffold00127 194354 3 TTT .CA scaffold8280 ScafM INDEL 0033.scaffold00127 194597 1 . T scaffold8280 ScafM SNP 0033.scaffold00127 194622 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 194651 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 194664 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 194683 2 GA AT scaffold8280 ScafM SNP 0033.scaffold00127 194701 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 194703 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 194706 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 194707 1 . G scaffold8280 ScafM INDEL 0033.scaffold00127 194858 1 . A scaffold8280 ScafM INDEL 0033.scaffold00127 194868 3 TAG ... scaffold8280 ScafM INDEL 0033.scaffold00127 195464 1 . A scaffold324 ScafM INDEL 0033.scaffold00127 195471 3 GAT ..C scaffold324 ScafM SNP 0033.scaffold00127 195482 1 G A scaffold324 ScafM INDEL 0033.scaffold00127 195483 1 . T scaffold324 ScafM SNP 0033.scaffold00127 195489 2 TC CT scaffold324 ScafM INDEL 0033.scaffold00127 195496 2 .. TT scaffold324 ScafM SNP 0033.scaffold00127 195504 1 T C scaffold324 ScafM SNP 0033.scaffold00127 195518 1 C A scaffold324 ScafM SNP 0033.scaffold00127 195539 2 AA TG scaffold324 ScafM SNP 0033.scaffold00127 195545 1 C A scaffold324 ScafM INDEL 0033.scaffold00127 195551 6 TAAATT ...... scaffold324 ScafM SNP 0033.scaffold00127 195560 1 C T scaffold324 ScafM SNP 0033.scaffold00127 195581 1 T C scaffold324 ScafM SNP 0033.scaffold00127 195586 1 T A scaffold324 ScafM SNP 0033.scaffold00127 195590 1 C T scaffold324 ScafM SNP 0033.scaffold00127 195609 1 G A scaffold324 ScafM SNP 0033.scaffold00127 200636 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 200650 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 200677 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 200924 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 200990 1 G T scaffold8280 ScafM INDEL 0033.scaffold00127 201022 2 .. TA scaffold8280 ScafM SNP 0033.scaffold00127 201087 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 201114 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 201116 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 201144 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 201174 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 201191 2 AC .T scaffold8280 ScafM SNP 0033.scaffold00127 201241 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 201252 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 201309 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 201577 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 202288 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 202305 2 CC TT scaffold8280 ScafM SNP 0033.scaffold00127 202318 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 202337 1 . C scaffold8280 ScafM SNP 0033.scaffold00127 202352 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 202366 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 202372 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 202374 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 202378 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 202386 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 202411 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 202423 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 202473 1 C G scaffold8280 ScafM INDEL 0033.scaffold00127 202481 4 CTTT .... scaffold8280 ScafM INDEL 0033.scaffold00127 202543 3 ATA ... scaffold8280 ScafM SNP 0033.scaffold00127 202558 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 203499 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 203503 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 203527 2 GG AA scaffold8280 ScafM SNP 0033.scaffold00127 203533 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 203538 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 203544 3 CCG AAA scaffold8280 ScafM SNP 0033.scaffold00127 203557 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 203601 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 203617 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 203624 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 203639 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 203642 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 203650 1 T . scaffold8280 ScafM SNP 0033.scaffold00127 203659 1 T G scaffold8280 ScafM INDEL 0033.scaffold00127 203687 5 ....G ATATA scaffold8280 ScafM SNP 0033.scaffold00127 203714 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 203729 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 203751 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 203778 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 203785 1 G C scaffold8280 ScafM INDEL 0033.scaffold00127 203789 1 G . scaffold8280 ScafM SNP 0033.scaffold00127 203833 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 203842 5 GAGAC ..... scaffold8280 ScafM SNP 0033.scaffold00127 203851 1 T G scaffold8280 ScafM INDEL 0033.scaffold00127 203865 2 GC .T scaffold8280 ScafM SNP 0033.scaffold00127 203885 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 203890 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 203895 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 203905 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 203914 1 C A scaffold8280 ScafM INDEL 0033.scaffold00127 203927 4 GAAC .... scaffold8280 ScafM SNP 0033.scaffold00127 203971 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 203989 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204035 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 204046 1 A . scaffold8280 ScafM INDEL 0033.scaffold00127 204093 10 TAGATGGTGA .......... scaffold8280 ScafM SNP 0033.scaffold00127 204119 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204132 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 204135 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204170 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204176 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204182 2 GC TT scaffold8280 ScafM SNP 0033.scaffold00127 204281 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 204291 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 204311 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 204319 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 204327 1 G T scaffold8280 ScafM INDEL 0033.scaffold00127 204349 1 A . scaffold8280 ScafM SNP 0033.scaffold00127 204355 2 AC GT scaffold8280 ScafM SNP 0033.scaffold00127 204359 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 204377 2 GA TG scaffold8280 ScafM SNP 0033.scaffold00127 204389 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204399 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204422 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204439 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204451 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 204453 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 204460 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 204471 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204475 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204479 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 204489 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204507 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 204518 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 204529 1 G . scaffold8280 ScafM INDEL 0033.scaffold00127 204548 1 . T scaffold8280 ScafM INDEL 0033.scaffold00127 204551 1 A . scaffold8280 ScafM INDEL 0033.scaffold00127 204598 1 G . scaffold8280 ScafM SNP 0033.scaffold00127 204600 2 AG TT scaffold8280 ScafM INDEL 0033.scaffold00127 204603 2 TC .G scaffold8280 ScafM SNP 0033.scaffold00127 204606 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 204609 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204616 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204618 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204649 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 204659 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204696 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204703 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204713 1 C G scaffold8280 ScafM SNP 0033.scaffold00127 204715 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204721 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 204726 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 204808 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 204815 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 204876 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204890 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204897 2 GA CC scaffold8280 ScafM SNP 0033.scaffold00127 204905 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204940 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 204950 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204956 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 204985 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 205014 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 205023 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 205039 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 205048 2 CA TG scaffold8280 ScafM SNP 0033.scaffold00127 205071 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 205077 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 205091 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 205097 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 205099 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 205102 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 205111 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 205115 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 205145 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 230605 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 230612 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 230615 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 230627 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 230634 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 230640 1 G . scaffold8280 ScafM SNP 0033.scaffold00127 230657 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 230679 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 230684 1 T A scaffold8280 ScafM INDEL 0033.scaffold00127 230729 1 . A scaffold8280 ScafM SNP 0033.scaffold00127 230763 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 230794 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 230796 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 230812 2 GA AG scaffold8280 ScafM SNP 0033.scaffold00127 230816 1 T G scaffold8280 ScafM SNP 0033.scaffold00127 231808 1 A C scaffold8280 ScafM SNP 0033.scaffold00127 231824 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 231851 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 231863 5 .AAAA CTTCT scaffold8280 ScafM SNP 0033.scaffold00127 231871 2 GG AA scaffold8280 ScafM SNP 0033.scaffold00127 231894 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 231949 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 232002 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 232041 1 A T scaffold8280 ScafM SNP 0033.scaffold00127 232097 1 G C scaffold8280 ScafM SNP 0033.scaffold00127 232118 1 G T scaffold8280 ScafM SNP 0033.scaffold00127 232130 1 C A scaffold8280 Both SNP 0033.scaffold00127 232268 1 T C scaffold8280 Both SNP 0033.scaffold00127 232277 1 G A scaffold8280 Both SNP 0033.scaffold00127 232343 1 C T scaffold8280 Both SNP 0033.scaffold00127 232566 1 T A scaffold8280 Both SNP 0033.scaffold00127 232656 1 A T scaffold8280 Both SNP 0033.scaffold00127 232694 1 G T scaffold8280 ScafM INDEL 0033.scaffold00127 232717 18 .................. CATTTCCATTTCCATTTT scaffold8280 ReadM SNP 0033.scaffold00127 233056 1 G T - ReadM SNP 0033.scaffold00127 233058 1 C T - ScafM INDEL 0033.scaffold00127 233433 17 ................. TTTAGAGATGACATATG scaffold8280 Both SNP 0033.scaffold00127 233495 1 T C scaffold8280 Both SNP 0033.scaffold00127 233572 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 233593 1 T C scaffold8280 ScafM INDEL 0033.scaffold00127 233629 2 TT .. scaffold8280 Both SNP 0033.scaffold00127 233647 1 T A scaffold8280 Both SNP 0033.scaffold00127 233824 2 GT AA scaffold8280 Both SNP 0033.scaffold00127 234187 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 234248 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 234252 4 ATGG .... scaffold8280 ScafM SNP 0033.scaffold00127 234269 1 A G scaffold8280 Both SNP 0033.scaffold00127 234306 1 G T scaffold8280 Both SNP 0033.scaffold00127 234454 1 G A scaffold8280 Both SNP 0033.scaffold00127 234461 1 G A scaffold8280 Both SNP 0033.scaffold00127 234496 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 234526 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 234550 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 234556 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 234558 1 G A scaffold8280 ScafM SNP 0033.scaffold00127 234590 1 C A scaffold8280 ScafM SNP 0033.scaffold00127 234645 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 234656 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 234663 1 C T scaffold8280 ScafM SNP 0033.scaffold00127 234665 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 234675 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 234678 1 T G scaffold8280 Both SNP 0033.scaffold00127 234749 1 A G scaffold8280 Both SNP 0033.scaffold00127 234761 1 T C scaffold8280 Both SNP 0033.scaffold00127 234769 1 C T scaffold8280 ScafM INDEL 0033.scaffold00127 234818 8 ........ CGGACTTA scaffold8280 Both SNP 0033.scaffold00127 235197 1 G A scaffold8280 Both SNP 0033.scaffold00127 235300 1 G A scaffold8280 Both INDEL 0033.scaffold00127 235332 1 A . scaffold8280 ScafM INDEL 0033.scaffold00127 235348 1 G . scaffold8280 ScafM INDEL 0033.scaffold00127 235351 1 T . scaffold8280 ScafM SNP 0033.scaffold00127 235353 1 C G scaffold8280 Both SNP 0033.scaffold00127 235412 1 C T scaffold8280 Both SNP 0033.scaffold00127 235491 1 G T scaffold8280 Both INDEL 0033.scaffold00127 235495 1 . G scaffold8280 Both SNP 0033.scaffold00127 235508 1 A G scaffold8280 Both SNP 0033.scaffold00127 235619 1 A C scaffold8280 ReadM SNP 0033.scaffold00127 235855 1 C T - ReadM SNP 0033.scaffold00127 235886 1 T C - ReadM SNP 0033.scaffold00127 235891 1 C T - Both SNP 0033.scaffold00127 236077 1 A T scaffold8280 Both SNP 0033.scaffold00127 236194 1 T C scaffold8280 Both SNP 0033.scaffold00127 236266 1 T C scaffold8280 Both SNP 0033.scaffold00127 236358 1 A G scaffold8280 ReadM SNP 0033.scaffold00127 236389 1 T G - ReadM SNP 0033.scaffold00127 236396 1 G T - ReadM SNP 0033.scaffold00127 236453 1 G T - ReadM SNP 0033.scaffold00127 236482 1 G A - ScafM INDEL 0033.scaffold00127 236600 71 ....................................................................... CCAGACCGTCAAGTGATCTATTTCCACCCTCTCTCTCCTTAACTAGTATTACCATTAATGGAATTGTAGGC scaffold8280 ReadM SNP 0033.scaffold00127 236799 1 G A - ReadM SNP 0033.scaffold00127 236825 1 G A - Both SNP 0033.scaffold00127 237388 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 237432 1 G A scaffold8280 ScafM INDEL 0033.scaffold00127 237448 5 ATATA ..... scaffold8280 Both SNP 0033.scaffold00127 237873 1 T C scaffold8280 Both SNP 0033.scaffold00127 237927 1 G A scaffold8280 Both SNP 0033.scaffold00127 238030 1 T A scaffold8280 Both SNP 0033.scaffold00127 238033 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 238077 2 AG GT scaffold8280 ScafM INDEL 0033.scaffold00127 238128 8 AGTCTATT ........ scaffold8280 ScafM SNP 0033.scaffold00127 238189 1 T C scaffold8280 ScafM SNP 0033.scaffold00127 238193 1 A G scaffold8280 ScafM SNP 0033.scaffold00127 238247 1 A C scaffold8280 ReadM SNP 0033.scaffold00127 238401 1 T C - ReadM SNP 0033.scaffold00127 238415 1 G A - ReadM SNP 0033.scaffold00127 238424 1 T G - Both SNP 0033.scaffold00127 238561 1 T A scaffold8280 ScafM SNP 0033.scaffold00127 238706 1 T A scaffold8280 ScafM INDEL 0033.scaffold00127 238785 25 AGAAGAGAATTTGTTTATCTTAATG ......................... scaffold8280 ReadM SNP 0033.scaffold00127 239661 1 C T - ReadM SNP 0033.scaffold00127 239701 1 T C - ReadM SNP 0033.scaffold00127 239724 1 T C - ReadM SNP 0033.scaffold00127 239883 1 C T - ReadM SNP 0033.scaffold00127 239958 1 T C - ReadM SNP 0033.scaffold00127 240091 1 G A - Both SNP 0033.scaffold00127 240311 1 G A scaffold8280 ReadM INDEL 0033.scaffold00127 240455 1 A . - ReadM SNP 0033.scaffold00127 240586 1 T C - ReadM INDEL 0033.scaffold00127 240684 1 . T - ReadM SNP 0033.scaffold00127 240706 1 T C - ReadM INDEL 0033.scaffold00127 240739 1 C . - ReadM SNP 0033.scaffold00127 240970 1 G A - ReadM SNP 0033.scaffold00127 242042 1 G A - Both SNP 0033.scaffold00127 242122 1 C T scaffold8280 Both SNP 0033.scaffold00127 242182 1 A C scaffold8280 Both SNP 0033.scaffold00127 242275 1 T C scaffold8280 ReadM INDEL 0033.scaffold00127 242478 1 T . - ReadM SNP 0033.scaffold00127 242688 1 C T - ReadM SNP 0033.scaffold00127 242727 1 C T - ReadM SNP 0033.scaffold00127 242730 1 C T - ReadM SNP 0033.scaffold00127 242760 1 C G - ReadM SNP 0033.scaffold00127 242825 1 C A - ReadM SNP 0033.scaffold00127 242835 1 T C - ReadM SNP 0033.scaffold00127 242857 1 T C - ReadM SNP 0033.scaffold00127 242867 1 G T - ReadM SNP 0033.scaffold00127 242933 1 T G - ReadM SNP 0033.scaffold00127 243193 1 G A - ReadM SNP 0033.scaffold00127 243246 1 C T - ReadM SNP 0033.scaffold00127 243271 1 C T - Both INDEL 0033.scaffold00127 243377 1 . G scaffold8280 Both SNP 0033.scaffold00127 243410 1 T G scaffold8280 ReadM SNP 0033.scaffold00127 243429 1 A G - ReadM SNP 0033.scaffold00127 243445 1 A G - Both SNP 0033.scaffold00127 243575 1 A C scaffold8280 Both SNP 0033.scaffold00127 243648 1 T C scaffold8280 Both SNP 0033.scaffold00127 243659 1 A G scaffold8280 Both SNP 0033.scaffold00127 243713 1 A G scaffold8280 ScafM INDEL 0033.scaffold00127 243733 4 ...G AAAA scaffold8280 Both INDEL 0033.scaffold00127 243810 2 .. TA scaffold8280 ScafM SNP 0033.scaffold00127 243813 1 C T scaffold8280 Both SNP 0033.scaffold00127 243882 1 A C scaffold8280 ScafM INDEL 0033.scaffold00127 243958 5 AAACA ..... scaffold8280 Both SNP 0033.scaffold00127 244023 1 C T scaffold8280 Both SNP 0033.scaffold00127 244138 1 G T scaffold8280 Both SNP 0033.scaffold00127 244149 1 C T scaffold8280 Both SNP 0033.scaffold00127 244303 1 G T scaffold8280 Both SNP 0033.scaffold00127 244311 1 C A scaffold8280 Both SNP 0033.scaffold00127 244373 1 C T scaffold8280 Both SNP 0033.scaffold00127 244417 1 G A scaffold8280 ReadM SNP 0033.scaffold00127 244488 1 T A - ReadM SNP 0033.scaffold00127 244501 1 G A - ReadM SNP 0033.scaffold00127 244520 1 G A - ReadM SNP 0033.scaffold00127 244531 1 A T - ReadM SNP 0033.scaffold00127 244660 1 G A - ReadM SNP 0033.scaffold00127 244713 1 A G - ScafM INDEL 0033.scaffold00127 260084 6 ...... TAATAT scaffold8280 ScafM INDEL 0033.scaffold00127 276743 1 . T scaffold41059 Both SNP 0033.scaffold00127 282736 1 G C scaffold41059 ScafM INDEL 0033.scaffold00127 292973 1 . A scaffold4439 ScafM INDEL 0033.scaffold00127 321948 1 . T scaffold4439 ScafM SNP 0033.scaffold00127 321990 1 A G scaffold4439 ScafM SNP 0033.scaffold00127 322022 1 C G scaffold4439 ScafM SNP 0033.scaffold00127 326985 1 T C scaffold4439 ScafM SNP 0033.scaffold00127 327752 1 T G scaffold4439 ScafM INDEL 0033.scaffold00127 355569 22 ...................... GAGTTGTCCTTTTGTTTGGGCT scaffold4439 ScafM INDEL 0033.scaffold00127 355682 1 G . scaffold4439 ScafM INDEL 0033.scaffold00127 355704 1 C . scaffold4439 ScafM INDEL 0033.scaffold00127 355713 1 . A scaffold4439 ScafM SNP 0033.scaffold00127 358032 1 T C scaffold26566 ScafM INDEL 0033.scaffold00127 358034 1 A . scaffold26566 ScafM SNP 0033.scaffold00127 360097 1 A T scaffold4650 ScafM INDEL 0033.scaffold00127 361091 1 . T scaffold4439 ScafM SNP 0033.scaffold00127 361108 1 A G scaffold4439 ScafM INDEL 0033.scaffold00127 361114 4 .... TACC scaffold4439 ScafM INDEL 0033.scaffold00127 364258 1 A . scaffold4439 ScafM INDEL 0033.scaffold00127 368423 1 . A scaffold4439 ScafM SNP 0033.scaffold00127 368426 1 T G scaffold4439 ScafM INDEL 0033.scaffold00127 368857 13 ............. TTTTTTTTTTTGT scaffold4439 ScafM SNP 0033.scaffold00127 391111 1 C T scaffold3804 ScafM SNP 0033.scaffold00127 391115 1 G A scaffold3804 ScafM INDEL 0033.scaffold00127 391150 2 GT .C scaffold3804 ScafM SNP 0033.scaffold00127 391153 3 GCC AAT scaffold3804 ScafM SNP 0033.scaffold00127 391158 2 CC GT scaffold3804 ScafM INDEL 0033.scaffold00127 391160 3 .AG GCC scaffold3804 ScafM SNP 0033.scaffold00127 391165 2 AG CC scaffold3804 ScafM INDEL 0033.scaffold00127 420160 1 . A scaffold8712 ScafM INDEL 0033.scaffold00127 422573 1 . A scaffold8712 ScafM INDEL 0033.scaffold00127 430373 2 .. TA scaffold8712 ScafM SNP 0033.scaffold00127 433661 1 T G scaffold8712 ScafM INDEL 0033.scaffold00127 453973 1 . T scaffold8712 ScafM INDEL 0033.scaffold00127 457270 2 CA .. scaffold8712 ScafM SNP 0033.scaffold00127 457283 1 T C scaffold8712 ReadM SNP 0033.scaffold00127 459536 1 A G - ScafM SNP 0033.scaffold00127 467513 1 T G scaffold8712 ScafM SNP 0033.scaffold00127 467531 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 467535 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 467549 1 G A scaffold8712 ScafM SNP 0033.scaffold00127 467554 1 A G scaffold8712 ScafM SNP 0033.scaffold00127 467584 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 467628 1 A G scaffold8712 ScafM SNP 0033.scaffold00127 468074 1 G A scaffold8712 ScafM SNP 0033.scaffold00127 468126 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 468138 1 C T scaffold8712 ScafM SNP 0033.scaffold00127 468145 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 469173 1 C T scaffold8712 ScafM SNP 0033.scaffold00127 469522 1 A T scaffold8712 ScafM SNP 0033.scaffold00127 469587 1 C T scaffold8712 ScafM SNP 0033.scaffold00127 469665 1 T C scaffold8712 ScafM SNP 0033.scaffold00127 469738 1 A G scaffold8712 ScafM SNP 0033.scaffold00127 470083 1 T G scaffold52684 ScafM SNP 0033.scaffold00127 470174 1 T C scaffold52684 ScafM SNP 0033.scaffold00127 470192 1 T C scaffold52684 ScafM SNP 0033.scaffold00127 470212 1 A G scaffold52684 ScafM INDEL 0033.scaffold00127 475085 27 ........................... TTTGGGGGGGTTTTTTTTTTTTTTTGG scaffold8712 ScafM SNP 0033.scaffold00127 490558 2 CA AC scaffold317 ScafM INDEL 0033.scaffold00127 502907 20 TAAATATTTTTTGAGGGTTT .................... scaffold317 ScafM SNP 0033.scaffold00127 507062 1 T A scaffold317 ReadM SNP 0033.scaffold00127 510518 1 C T - ReadM SNP 0033.scaffold00127 518895 1 C T - ScafM INDEL 0033.scaffold00127 527179 1 . T scaffold317 ScafM SNP 0033.scaffold00127 551504 1 C T scaffold317 ScafM INDEL 0033.scaffold00127 555066 1 A . scaffold317 ReadM INDEL 0033.scaffold00127 557943 2 AG .. - ScafM INDEL 0033.scaffold00127 577308 1 . A scaffold317 ScafM SNP 0033.scaffold00127 577589 1 A G scaffold317 ScafM SNP 0033.scaffold00127 585254 1 C A scaffold5278 ScafM SNP 0033.scaffold00127 585282 1 T C scaffold5278 ScafM SNP 0033.scaffold00127 585297 1 C T scaffold5278 ScafM SNP 0033.scaffold00127 585329 1 A T scaffold5278 ScafM SNP 0033.scaffold00127 601978 1 C T scaffold51304 ScafM SNP 0033.scaffold00127 617830 1 T G scaffold9822 ScafM SNP 0033.scaffold00127 617843 1 C T scaffold9822 ScafM SNP 0033.scaffold00127 617850 1 T A scaffold9822 ScafM INDEL 0033.scaffold00127 617863 1 A . scaffold9822 ScafM SNP 0033.scaffold00127 617867 1 C G scaffold9822 ScafM SNP 0033.scaffold00127 617877 1 G A scaffold9822 ScafM SNP 0033.scaffold00127 617905 1 T C scaffold9822 ScafM INDEL 0033.scaffold00127 617916 2 .. AC scaffold9822 ScafM INDEL 0033.scaffold00127 617918 1 . A scaffold9822 ScafM INDEL 0033.scaffold00127 617920 3 ... TTC scaffold9822 ScafM INDEL 0033.scaffold00127 617923 2 .. GG scaffold9822 ScafM INDEL 0033.scaffold00127 617928 7 ....... GCACGCC scaffold9822 ScafM SNP 0033.scaffold00127 617934 1 A T scaffold9822 ScafM SNP 0033.scaffold00127 617940 1 T A scaffold9822 ScafM SNP 0033.scaffold00127 617973 1 A C scaffold9822 ScafM SNP 0033.scaffold00127 617977 1 T A scaffold9822 ScafM SNP 0033.scaffold00127 617993 1 C T scaffold9822 ScafM SNP 0033.scaffold00127 617997 1 A G scaffold9822 ScafM INDEL 0033.scaffold00127 618011 1 . T scaffold9822 ScafM INDEL 0033.scaffold00127 618029 3 ... ATT scaffold9822 ScafM SNP 0033.scaffold00127 618030 1 G A scaffold9822 ScafM SNP 0033.scaffold00127 618052 1 T C scaffold9822 ScafM SNP 0033.scaffold00127 618095 1 A C scaffold9822 ScafM SNP 0033.scaffold00127 618140 1 C G scaffold9822 ScafM SNP 0033.scaffold00127 618143 1 C T scaffold9822 ScafM INDEL 0033.scaffold00127 618146 12 ............ ATTGTTATTGTT scaffold9822 ScafM SNP 0033.scaffold00127 618168 1 T C scaffold9822 ScafM SNP 0033.scaffold00127 618184 1 T G scaffold9822 ScafM SNP 0033.scaffold00127 618204 1 C T scaffold9822 ScafM SNP 0033.scaffold00127 618214 1 G C scaffold9822 ScafM SNP 0033.scaffold00127 618258 1 G A scaffold9822 ScafM SNP 0033.scaffold00127 618267 1 G T scaffold9822 ScafM SNP 0033.scaffold00127 618291 1 T G scaffold9822 ScafM SNP 0033.scaffold00127 618303 1 C T scaffold9822 ScafM INDEL 0033.scaffold00127 618332 2 TT .. scaffold9822 ScafM SNP 0033.scaffold00127 618413 1 T G scaffold9822 ScafM SNP 0033.scaffold00127 618436 1 A G scaffold9822 ScafM SNP 0033.scaffold00127 618671 1 T A scaffold41865 ScafM SNP 0033.scaffold00127 618683 1 C T scaffold41865 ScafM SNP 0033.scaffold00127 618698 1 T C scaffold41865 ReadM SNP 0033.scaffold00127 618780 1 A G - ScafM SNP 0033.scaffold00127 618806 1 C T scaffold35658 ScafM SNP 0033.scaffold00127 618810 1 A C scaffold35658 ScafM SNP 0033.scaffold00127 618812 1 T C scaffold35658 ScafM INDEL 0033.scaffold00127 618816 1 . T scaffold35658 ReadM SNP 0033.scaffold00127 618841 1 A T - ReadM SNP 0033.scaffold00127 618865 1 G C - ScafM SNP 0033.scaffold00127 618915 1 C T scaffold35658 ScafM SNP 0033.scaffold00127 618928 1 A G scaffold35658 ScafM SNP 0033.scaffold00127 618943 1 G A scaffold35658 ScafM SNP 0033.scaffold00127 618952 1 A T scaffold35658 ScafM SNP 0033.scaffold00127 618955 1 G T scaffold35658 ScafM SNP 0033.scaffold00127 619063 1 T G scaffold35658 ScafM SNP 0033.scaffold00127 619068 1 T C scaffold35658 ScafM INDEL 0033.scaffold00127 619088 4 .... ACTC scaffold35658 ScafM INDEL 0033.scaffold00127 619090 4 .... GGTA scaffold35658 ScafM SNP 0033.scaffold00127 619094 1 G A scaffold35658 ScafM SNP 0033.scaffold00127 619130 1 A G scaffold35658 ScafM SNP 0033.scaffold00127 624641 1 T A scaffold6290 ScafM SNP 0033.scaffold00127 624644 1 C T scaffold6290 ScafM SNP 0033.scaffold00127 624733 1 G T scaffold6290 ScafM SNP 0033.scaffold00127 624777 1 A G scaffold6290 ScafM SNP 0033.scaffold00127 625189 1 T C scaffold6290 ScafM INDEL 0033.scaffold00127 629626 1 . A scaffold3907 ScafM SNP 0033.scaffold00127 631093 1 A C scaffold3907 ScafM INDEL 0033.scaffold00127 633995 2 .. TT scaffold3907 ReadM SNP 0033.scaffold00127 642242 1 G T - ScafM INDEL 0033.scaffold00127 644549 1 A . scaffold4547 ScafM SNP 0033.scaffold00127 644557 1 A T scaffold4547 ScafM SNP 0033.scaffold00127 644599 1 C T scaffold4547 ScafM SNP 0033.scaffold00127 644611 1 C T scaffold4547 ScafM SNP 0033.scaffold00127 644628 1 T A scaffold4547 ScafM INDEL 0033.scaffold00127 644633 1 T . scaffold4547 ScafM SNP 0033.scaffold00127 644639 1 G A scaffold4547 ScafM SNP 0033.scaffold00127 644674 1 C A scaffold4547 ScafM SNP 0033.scaffold00127 644678 1 T C scaffold4547 ScafM SNP 0033.scaffold00127 644741 1 G A scaffold4547 ScafM SNP 0033.scaffold00127 644744 1 T C scaffold4547 ScafM SNP 0033.scaffold00127 644751 1 G A scaffold4547 ScafM SNP 0033.scaffold00127 644756 1 T C scaffold4547 ScafM INDEL 0033.scaffold00127 644767 2 .. AC scaffold4547 ScafM SNP 0033.scaffold00127 644779 1 G T scaffold4547 ScafM SNP 0033.scaffold00127 644787 1 G A scaffold4547 ScafM SNP 0033.scaffold00127 644794 1 A G scaffold4547 ScafM INDEL 0033.scaffold00127 644797 1 A . scaffold4547 ScafM INDEL 0033.scaffold00127 644802 1 . T scaffold4547 ScafM SNP 0033.scaffold00127 644829 1 A T scaffold4547 ScafM INDEL 0033.scaffold00127 645672 1 . T scaffold60023 ScafM INDEL 0033.scaffold00127 645924 1 A . scaffold60023 ScafM SNP 0033.scaffold00127 645948 1 G T scaffold60023 ScafM SNP 0033.scaffold00127 645984 1 A G scaffold60023 ScafM SNP 0033.scaffold00127 646083 1 A G scaffold60023 ScafM SNP 0033.scaffold00127 646098 1 A C scaffold60023 ScafM INDEL 0033.scaffold00127 646120 1 A . scaffold60023 ScafM SNP 0033.scaffold00127 646132 1 C T scaffold60023 ScafM SNP 0033.scaffold00127 646138 1 T C scaffold60023 ScafM SNP 0033.scaffold00127 646147 1 A G scaffold60023 ScafM SNP 0033.scaffold00127 646167 1 C T scaffold60023 ScafM INDEL 0033.scaffold00127 646184 1 G . scaffold60023 ScafM SNP 0033.scaffold00127 646789 1 C T scaffold5373 ScafM INDEL 0033.scaffold00127 646809 1 . T scaffold5373 ScafM SNP 0033.scaffold00127 646884 1 C G scaffold5373 ScafM SNP 0033.scaffold00127 646940 2 TA AG scaffold5373 ScafM SNP 0033.scaffold00127 647003 1 C T scaffold5373 ScafM INDEL 0033.scaffold00127 647053 9 ATTAGCATT ......... scaffold5373 ScafM SNP 0033.scaffold00127 647075 1 G C scaffold5373 ScafM INDEL 0033.scaffold00127 647087 1 . G scaffold5373 ScafM SNP 0033.scaffold00127 647164 1 C T scaffold5373 ScafM INDEL 0033.scaffold00127 647191 16 ................ AGGGCAAGAGCGAAAA scaffold5373 ScafM INDEL 0033.scaffold00127 647192 9 ......... AAAAACACA scaffold5373 ScafM SNP 0033.scaffold00127 647201 1 T C scaffold5373 ScafM SNP 0033.scaffold00127 647224 1 A G scaffold5373 ScafM SNP 0033.scaffold00127 647253 1 G C scaffold5373 ScafM SNP 0033.scaffold00127 647258 1 T A scaffold5373 ScafM SNP 0033.scaffold00127 647310 1 C A scaffold5373 ScafM SNP 0033.scaffold00127 647320 1 A G scaffold5373 ScafM INDEL 0033.scaffold00127 647386 1 . T scaffold5373 ScafM SNP 0033.scaffold00127 647437 1 C T scaffold5373 ScafM INDEL 0033.scaffold00127 647517 7 ....... TCAGCCG scaffold5373 ScafM SNP 0033.scaffold00127 647529 1 A C scaffold5373 ScafM SNP 0033.scaffold00127 647580 1 T A scaffold5373 ScafM SNP 0033.scaffold00127 647600 1 T C scaffold5373 ScafM SNP 0033.scaffold00127 647604 1 C T scaffold5373 ScafM INDEL 0033.scaffold00127 647667 1 . T scaffold5373 ScafM INDEL 0033.scaffold00127 647711 2 .. TG scaffold5373 ScafM INDEL 0033.scaffold00127 647724 1 . T scaffold5373 ScafM SNP 0033.scaffold00127 647738 1 C A scaffold5373 ScafM SNP 0033.scaffold00127 647756 1 A G scaffold5373 ScafM SNP 0033.scaffold00127 647764 1 A T scaffold5373 ScafM SNP 0033.scaffold00127 647814 1 A C scaffold39256 ScafM SNP 0033.scaffold00127 647906 1 C T scaffold39256 ScafM SNP 0033.scaffold00127 647945 1 T G scaffold39256 ScafM SNP 0033.scaffold00127 647995 1 G A scaffold39256 ScafM SNP 0033.scaffold00127 647997 1 A T scaffold39256 ScafM SNP 0033.scaffold00127 648027 1 T C scaffold39256 ScafM SNP 0033.scaffold00127 648043 1 A G scaffold39256 ScafM INDEL 0033.scaffold00127 648084 12 TTTATGTATATC ............ scaffold39256 ScafM SNP 0033.scaffold00127 648120 1 A G scaffold39256 ScafM SNP 0033.scaffold00127 648138 1 G T scaffold39256 ScafM SNP 0033.scaffold00127 648140 1 T A scaffold39256 ScafM SNP 0033.scaffold00127 648179 1 A G scaffold39256 ScafM SNP 0033.scaffold00127 648203 1 T A scaffold39256 ScafM SNP 0033.scaffold00127 648215 1 G A scaffold39256 ScafM INDEL 0033.scaffold00127 648241 80 ................................................................................ AGTACTTGTAGAAAAAGGTCAATTTGCGTCGCCCAATAGGCGCCTCACATCCGACGCAAATTGCCTTTTCTGTACTAACT scaffold39256 ScafM SNP 0033.scaffold00127 648277 1 T C scaffold39256 ScafM SNP 0033.scaffold00127 648397 1 G T scaffold39256 ScafM SNP 0033.scaffold00127 648427 1 A T scaffold39256 ScafM SNP 0033.scaffold00127 648485 1 A C scaffold39256 ScafM INDEL 0033.scaffold00127 648549 1 T . scaffold39256 ScafM SNP 0033.scaffold00127 648622 1 T G scaffold39256 ScafM SNP 0033.scaffold00127 648645 1 A G scaffold39256 ScafM SNP 0033.scaffold00127 648692 1 T A scaffold39256 ScafM SNP 0033.scaffold00127 648738 1 T A scaffold39256 ScafM SNP 0033.scaffold00127 648780 1 G A scaffold39256 ScafM SNP 0033.scaffold00127 648806 1 T C scaffold39256 Both SNP 0033.scaffold00127 648811 1 C A scaffold39256 ScafM INDEL 0033.scaffold00127 648842 1 . G scaffold39256 ScafM SNP 0033.scaffold00127 648846 1 G A scaffold39256 ScafM SNP 0033.scaffold00127 648893 1 A C scaffold39256 ScafM INDEL 0033.scaffold00127 649019 1 C . scaffold39256 ScafM SNP 0033.scaffold00127 649021 1 A G scaffold39256 ScafM INDEL 0033.scaffold00127 649044 1 . G scaffold39256 ScafM SNP 0033.scaffold00127 649053 1 T G scaffold39256 ScafM INDEL 0033.scaffold00127 649060 1 C . scaffold39256 ScafM SNP 0033.scaffold00127 649066 1 C T scaffold39256 ScafM INDEL 0033.scaffold00127 650156 1 . G scaffold5373 ScafM INDEL 0033.scaffold00127 650172 3 AAA ... scaffold5373 ScafM SNP 0033.scaffold00127 650238 1 C A scaffold5373 ScafM SNP 0033.scaffold00127 650240 1 A C scaffold5373 ScafM SNP 0033.scaffold00127 650309 1 C G scaffold5373 ScafM SNP 0033.scaffold00127 650325 1 A T scaffold5373 ScafM INDEL 0033.scaffold00127 650422 1 T . scaffold5373 ScafM SNP 0033.scaffold00127 650433 1 G A scaffold5373 ScafM SNP 0033.scaffold00127 650440 1 G T scaffold5373 ScafM SNP 0033.scaffold00127 650450 1 C T scaffold5373 ScafM SNP 0033.scaffold00127 650464 1 C T scaffold5373 ScafM SNP 0033.scaffold00127 650496 1 T G scaffold5373 ScafM SNP 0033.scaffold00127 650499 1 T C scaffold5373 ScafM INDEL 0033.scaffold00127 655671 1 . A scaffold5373 ScafM INDEL 0033.scaffold00127 655674 1 . A scaffold5373 ScafM INDEL 0033.scaffold00127 655683 1 . A scaffold5373 ScafM INDEL 0033.scaffold00127 670664 1 C . scaffold5373 ScafM INDEL 0033.scaffold00127 670689 1 . G scaffold5373 ScafM SNP 0033.scaffold00127 678229 1 A G scaffold5373 ScafM SNP 0033.scaffold00127 695588 1 T G scaffold39256 ScafM SNP 0033.scaffold00127 720891 1 G A scaffold25103 ScafM SNP 0033.scaffold00127 721331 1 T C scaffold36100 ScafM SNP 0033.scaffold00127 721411 1 C T scaffold36100 ScafM SNP 0033.scaffold00127 721432 1 G A scaffold36100 ScafM SNP 0033.scaffold00127 721446 1 A G scaffold36100 ScafM SNP 0033.scaffold00127 721464 1 T C scaffold36100 ScafM SNP 0033.scaffold00127 721506 1 T C scaffold36100 ScafM SNP 0033.scaffold00127 721658 1 G A scaffold30532 ScafM SNP 0033.scaffold00127 721693 1 A C scaffold30532 ScafM SNP 0033.scaffold00127 721698 1 T C scaffold30532 ScafM SNP 0033.scaffold00127 721701 1 T C scaffold30532 ScafM SNP 0033.scaffold00127 721710 1 G A scaffold30532 ScafM SNP 0033.scaffold00127 721741 1 C T scaffold30532 ScafM SNP 0033.scaffold00127 721745 1 T G scaffold30532 ScafM SNP 0033.scaffold00127 721749 1 T C scaffold30532 ScafM SNP 0033.scaffold00127 721768 1 C T scaffold30532 ScafM SNP 0033.scaffold00127 721772 2 GC AA scaffold30532 ScafM SNP 0033.scaffold00127 721779 1 C T scaffold30532 ScafM SNP 0033.scaffold00127 721803 1 C T scaffold30532 ScafM SNP 0033.scaffold00127 721805 1 C T scaffold30532 ScafM SNP 0033.scaffold00127 725621 1 T A scaffold4547 ScafM SNP 0033.scaffold00127 725644 1 G C scaffold4547 ScafM SNP 0033.scaffold00127 725654 1 C T scaffold4547 ScafM SNP 0033.scaffold00127 725665 1 A G scaffold4547 ScafM SNP 0033.scaffold00127 725669 1 C G scaffold4547 ScafM SNP 0033.scaffold00127 725715 1 A G scaffold4547 ScafM INDEL 0033.scaffold00127 725717 1 . A scaffold4547 ScafM SNP 0033.scaffold00127 725732 1 A G scaffold4547 ScafM SNP 0033.scaffold00127 725774 1 A T scaffold4547 ScafM SNP 0033.scaffold00127 726336 1 C T scaffold4547 ReadM SNP 0033.scaffold00127 732354 1 G C - ScafM SNP 0033.scaffold00127 733027 1 T C scaffold4547 ScafM SNP 0033.scaffold00127 733979 1 G A scaffold4547 ScafM INDEL 0033.scaffold00127 747025 4 TACT .... scaffold4547 ScafM SNP 0033.scaffold00127 747032 1 T A scaffold4547 ScafM INDEL 0033.scaffold00127 747034 5 CCTGG ..... scaffold4547 ScafM INDEL 0033.scaffold00127 747041 5 AACAC ..... scaffold4547 ScafM INDEL 0033.scaffold00127 747050 5 TTTAC ..... scaffold4547 ScafM INDEL 0033.scaffold00127 755045 1 . A scaffold4547 ScafM INDEL 0033.scaffold00127 755334 1 A . scaffold4547 ScafM INDEL 0033.scaffold00127 802384 3 TAG ... scaffold69040 ScafM SNP 0033.scaffold00127 802395 1 G A scaffold69040 ScafM SNP 0033.scaffold00127 802420 1 A G scaffold69040 ScafM SNP 0033.scaffold00127 802538 2 GG AC scaffold69040 ScafM SNP 0033.scaffold00127 802541 1 T G scaffold69040 ScafM SNP 0033.scaffold00127 802545 1 G A scaffold69040 ScafM INDEL 0033.scaffold00127 802564 4 AAAT .... scaffold69040 ScafM SNP 0033.scaffold00127 802575 1 A G scaffold69040 ScafM SNP 0033.scaffold00127 802589 1 C T scaffold69040 ScafM INDEL 0033.scaffold00127 802596 1 . G scaffold69040 ScafM SNP 0033.scaffold00127 802599 1 A G scaffold69040 ScafM SNP 0033.scaffold00127 802627 1 G T scaffold69040 ScafM INDEL 0033.scaffold00127 804438 1 . A scaffold4547 ScafM SNP 0033.scaffold00127 816377 1 T G scaffold4547 ScafM SNP 0033.scaffold00127 816386 1 A G scaffold4547 ScafM SNP 0033.scaffold00127 816399 1 G C scaffold4547 ScafM SNP 0033.scaffold00127 816453 1 T C scaffold4547 ScafM INDEL 0033.scaffold00127 816501 3 ... TTG scaffold4547 ScafM INDEL 0033.scaffold00127 816502 1 . T scaffold4547 ScafM SNP 0033.scaffold00127 816548 1 A G scaffold4547 ScafM SNP 0033.scaffold00127 816553 1 C T scaffold4547 ScafM SNP 0033.scaffold00127 816569 1 G A scaffold4547 ScafM SNP 0033.scaffold00127 816580 1 C T scaffold4547 ScafM SNP 0033.scaffold00127 816825 1 C T scaffold4547 ScafM INDEL 0033.scaffold00127 838607 1 . T scaffold4752 ScafM INDEL 0033.scaffold00127 838612 1 A . scaffold4752 ScafM SNP 0033.scaffold00127 874227 1 G A scaffold18473 ScafM INDEL 0033.scaffold00127 899546 25 ......................... AAAAAAAAAAAAAAAAAACCCAAAA scaffold18473 ReadM SNP 0033.scaffold00127 909121 1 A C - ScafM SNP 0033.scaffold00127 915770 1 A C scaffold16923 ScafM SNP 0033.scaffold00127 945215 1 T A scaffold16923 ReadM SNP 0033.scaffold00127 972509 1 C G - ScafM INDEL 0033.scaffold00127 1002175 11 GTTATGATGTG ........... scaffold24919 ScafM INDEL 0033.scaffold00127 1002191 7 CTTTGGT ....... scaffold24919 ReadM INDEL 0033.scaffold00127 1010416 1 . C - ScafM INDEL 0033.scaffold00127 1019720 2 AC .. scaffold24919 ScafM INDEL 0033.scaffold00127 1019723 1 A . scaffold24919 ScafM INDEL 0033.scaffold00127 1019733 1 A . scaffold24919 ScafM INDEL 0033.scaffold00127 1019735 2 TA .. scaffold24919 ScafM INDEL 0033.scaffold00127 1019738 1 C . scaffold24919 ScafM INDEL 0033.scaffold00127 1019746 1 T . scaffold24919 ScafM INDEL 0033.scaffold00127 1019751 1 A . scaffold24919 ScafM INDEL 0033.scaffold00127 1019753 1 T . scaffold24919 ScafM INDEL 0033.scaffold00127 1019759 2 AC .. scaffold24919 ScafM INDEL 0033.scaffold00127 1019766 1 A . scaffold24919 ScafM SNP 0033.scaffold00127 1019768 1 T A scaffold24919 ScafM INDEL 0033.scaffold00127 1019772 2 CG .. scaffold24919 ScafM INDEL 0033.scaffold00127 1019789 1 A . scaffold24919 ScafM INDEL 0033.scaffold00127 1019791 1 T . scaffold24919 ScafM INDEL 0033.scaffold00127 1019794 1 T . scaffold24919 ScafM SNP 0033.scaffold00127 1019796 1 G T scaffold24919 ScafM INDEL 0033.scaffold00127 1019799 2 .. CG scaffold24919 ScafM INDEL 0033.scaffold00127 1019800 1 . C scaffold24919 ScafM INDEL 0033.scaffold00127 1019807 19 ................... AAAAATGGGTCGACCCAAC scaffold24919 ScafM INDEL 0033.scaffold00127 1019810 3 ... ACC scaffold24919 ScafM INDEL 0033.scaffold00127 1019815 4 .... ATAT scaffold24919 ScafM INDEL 0033.scaffold00127 1019817 1 . T scaffold24919 Both SNP 0033.scaffold00127 1029312 1 G A scaffold24919 ScafM INDEL 0033.scaffold00127 1032542 60 ............................................................ AGGAAAGATGGAATAGTAGGAATATCAGCTTTCATTGTTCACAGCAAAAAAAAAAAAAAA scaffold24919 ScafM INDEL 0033.scaffold00127 1051342 29 TCCATAAACCTGCAGGTGGCAGGATTCAA ............................. scaffold24919 ScafM INDEL 0033.scaffold00127 1057338 2 .. CT scaffold24919 ScafM INDEL 0033.scaffold00127 1057341 2 .G TA scaffold24919 ScafM SNP 0033.scaffold00127 1057345 1 T A scaffold24919 ScafM SNP 0033.scaffold00127 1057347 1 T C scaffold24919 ScafM SNP 0033.scaffold00127 1057350 1 A C scaffold24919 ScafM INDEL 0033.scaffold00127 1068851 11 ........... CCCCCCCCCCC scaffold24919 ScafM INDEL 0033.scaffold00127 1073904 27 CTGCTGTTACTGCAAATGTGCTTTGCT ........................... scaffold24919 ScafM INDEL 0033.scaffold00127 1073934 1 T . scaffold24919 ScafM INDEL 0033.scaffold00127 1073936 1 T . scaffold24919 ScafM SNP 0033.scaffold00127 1081233 1 T C scaffold13263 ScafM SNP 0033.scaffold00127 1081249 1 A G scaffold13263 ScafM SNP 0033.scaffold00127 1081282 1 T A scaffold13263 ScafM INDEL 0033.scaffold00127 1081286 1 . C scaffold13263 ScafM SNP 0033.scaffold00127 1081297 1 A T scaffold13263 ScafM SNP 0033.scaffold00127 1081370 1 C T scaffold13263 ScafM SNP 0033.scaffold00127 1081375 2 CC TA scaffold13263 ScafM SNP 0033.scaffold00127 1081382 1 G A scaffold13263 ScafM SNP 0033.scaffold00127 1081387 1 C G scaffold13263 ScafM SNP 0033.scaffold00127 1081401 1 T A scaffold13263 ScafM SNP 0033.scaffold00127 1081569 1 A C scaffold13263 ScafM SNP 0033.scaffold00127 1081597 1 G A scaffold13263 ScafM SNP 0033.scaffold00127 1081616 1 C T scaffold13263 ScafM SNP 0033.scaffold00127 1081699 1 C A scaffold13263 ScafM SNP 0033.scaffold00127 1081709 1 C T scaffold13263 ScafM SNP 0033.scaffold00127 1081830 1 T C scaffold13263 ScafM SNP 0033.scaffold00127 1081874 1 T C scaffold13263 ScafM INDEL 0033.scaffold00127 1082206 17 ................. TATAAAACCCACTCAAT scaffold23365 ScafM SNP 0033.scaffold00127 1082215 1 G A scaffold23365 ScafM SNP 0033.scaffold00127 1082337 1 G A scaffold23365 ScafM SNP 0033.scaffold00127 1082374 1 A T scaffold23365 ScafM SNP 0033.scaffold00127 1082447 1 G A scaffold23365 ScafM SNP 0033.scaffold00127 1101075 1 G T scaffold11023 ScafM SNP 0033.scaffold00127 1101100 1 T C scaffold11023 ScafM SNP 0033.scaffold00127 1101133 1 C T scaffold11023 ScafM SNP 0033.scaffold00127 1101178 1 G A scaffold11023 ScafM SNP 0033.scaffold00127 1101297 1 T C scaffold11023 ScafM SNP 0033.scaffold00127 1102735 1 A T scaffold8057 ScafM INDEL 0034.scaffold00131 34118 11 CACAAAAATCA ........... scaffold30632 ScafM SNP 0034.scaffold00131 34157 1 A T scaffold30632 ScafM SNP 0034.scaffold00131 34509 1 A G scaffold30632 ScafM INDEL 0034.scaffold00131 34524 12 ATCCTTTTCCCA ............ scaffold30632 ScafM SNP 0034.scaffold00131 34538 1 A G scaffold30632 ScafM SNP 0034.scaffold00131 34540 1 A G scaffold30632 ScafM SNP 0034.scaffold00131 34543 1 T G scaffold30632 ScafM INDEL 0034.scaffold00131 34559 1 . G scaffold30632 ScafM INDEL 0034.scaffold00131 34909 2 AT .. scaffold30632 ScafM SNP 0034.scaffold00131 34927 1 C A scaffold30632 ScafM SNP 0034.scaffold00131 34978 1 T A scaffold30632 ScafM SNP 0034.scaffold00131 34990 1 T G scaffold30632 ScafM INDEL 0034.scaffold00131 35010 4 .... ATCT scaffold30632 ScafM SNP 0034.scaffold00131 35011 1 G C scaffold30632 ScafM SNP 0034.scaffold00131 35016 1 T C scaffold30632 ScafM SNP 0034.scaffold00131 35040 1 T G scaffold30632 ScafM SNP 0034.scaffold00131 35048 1 C T scaffold30632 ScafM SNP 0034.scaffold00131 35057 1 G A scaffold30632 ScafM SNP 0034.scaffold00131 35104 1 G A scaffold30632 ScafM SNP 0034.scaffold00131 35126 1 G C scaffold30632 ScafM SNP 0034.scaffold00131 35134 1 C G scaffold30632 ScafM SNP 0034.scaffold00131 35138 1 T C scaffold30632 ScafM SNP 0034.scaffold00131 36772 1 G A scaffold3878 ScafM SNP 0034.scaffold00131 36778 1 G C scaffold3878 ScafM SNP 0034.scaffold00131 36809 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 36848 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 36852 1 A C scaffold3878 ScafM SNP 0034.scaffold00131 36889 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 36915 1 T A scaffold3878 ScafM SNP 0034.scaffold00131 36944 1 G C scaffold3878 ScafM SNP 0034.scaffold00131 36955 1 C A scaffold3878 ScafM SNP 0034.scaffold00131 36991 1 A T scaffold3878 ScafM SNP 0034.scaffold00131 37205 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 37286 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 37331 1 C A scaffold3878 ScafM SNP 0034.scaffold00131 37385 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 37387 1 G T scaffold3878 ScafM SNP 0034.scaffold00131 37403 1 A C scaffold3878 ScafM SNP 0034.scaffold00131 37421 1 C T scaffold3878 ScafM SNP 0034.scaffold00131 37429 1 C G scaffold3878 ScafM SNP 0034.scaffold00131 37431 1 C T scaffold3878 ScafM SNP 0034.scaffold00131 37436 1 T A scaffold3878 ScafM SNP 0034.scaffold00131 37440 1 G A scaffold3878 ScafM SNP 0034.scaffold00131 37456 1 C T scaffold3878 ScafM SNP 0034.scaffold00131 37472 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 37478 1 C A scaffold3878 ScafM SNP 0034.scaffold00131 37487 1 T A scaffold3878 ScafM SNP 0034.scaffold00131 37489 2 TT CA scaffold3878 ScafM SNP 0034.scaffold00131 37506 1 G A scaffold3878 ScafM SNP 0034.scaffold00131 37514 1 A T scaffold3878 ScafM INDEL 0034.scaffold00131 37522 2 .C AA scaffold3878 ScafM SNP 0034.scaffold00131 37586 1 G T scaffold3878 ScafM SNP 0034.scaffold00131 37600 1 T A scaffold3878 ScafM INDEL 0034.scaffold00131 37814 9 ......... CGGTTTCTT scaffold3878 ScafM INDEL 0034.scaffold00131 37817 16 ................ AAGTGATAGATAATAT scaffold3878 ScafM INDEL 0034.scaffold00131 37822 10 .......... AAAACAAAAA scaffold3878 ScafM SNP 0034.scaffold00131 37838 1 C T scaffold3878 ScafM SNP 0034.scaffold00131 37853 1 C A scaffold3878 ScafM SNP 0034.scaffold00131 37872 1 A T scaffold3878 ScafM SNP 0034.scaffold00131 37893 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 37899 1 T A scaffold3878 ScafM SNP 0034.scaffold00131 37910 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 37997 1 G T scaffold3878 ScafM SNP 0034.scaffold00131 38048 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 38077 2 CC TT scaffold3878 ScafM SNP 0034.scaffold00131 38101 1 C T scaffold3878 ScafM SNP 0034.scaffold00131 38103 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 38168 1 G A scaffold3878 ScafM SNP 0034.scaffold00131 38244 1 G A scaffold3878 ScafM SNP 0034.scaffold00131 38452 1 C A scaffold3878 ScafM SNP 0034.scaffold00131 38459 1 A G scaffold3878 ScafM SNP 0034.scaffold00131 38463 1 T C scaffold3878 ScafM SNP 0034.scaffold00131 38469 2 TC CG scaffold3878 ScafM SNP 0034.scaffold00131 38480 1 G A scaffold3878 ReadM INDEL 0034.scaffold00131 71978 1 . T - ScafM INDEL 0034.scaffold00131 80202 3 ... TTT scaffold1034 ScafM INDEL 0034.scaffold00131 84482 30 GGGTTGCTTTCACTTAATATTGAAAGGGCA .............................. scaffold1034 ScafM SNP 0034.scaffold00131 96527 1 C T scaffold1034 ScafM SNP 0034.scaffold00131 96541 1 A G scaffold1034 ScafM INDEL 0034.scaffold00131 96576 1 . C scaffold1034 ScafM SNP 0034.scaffold00131 96578 1 C A scaffold1034 ScafM INDEL 0034.scaffold00131 96594 1 T . scaffold1034 ReadM INDEL 0034.scaffold00131 116467 1 T . - ScafM SNP 0034.scaffold00131 119100 1 A T scaffold3508 ScafM SNP 0034.scaffold00131 119210 2 TC CT scaffold3508 ScafM INDEL 0034.scaffold00131 119213 1 . A scaffold3508 ScafM SNP 0034.scaffold00131 119218 1 C A scaffold3508 ScafM INDEL 0034.scaffold00131 125152 7 ATTTTTT ....... scaffold3508 ScafM INDEL 0034.scaffold00131 144222 20 .................... GAGGTGAAAGCAAAGGATTC scaffold3508 ScafM SNP 0034.scaffold00131 144302 1 G T scaffold3508 ScafM SNP 0034.scaffold00131 144306 1 C T scaffold3508 ScafM SNP 0034.scaffold00131 145319 1 C G scaffold16953 ScafM SNP 0034.scaffold00131 145329 1 G A scaffold16953 ReadM INDEL 0034.scaffold00131 146889 1 . A - ScafM SNP 0034.scaffold00131 170946 1 A G scaffold1413 ScafM SNP 0034.scaffold00131 170955 1 A T scaffold1413 ScafM SNP 0034.scaffold00131 170961 1 G A scaffold1413 ScafM SNP 0034.scaffold00131 170964 1 A G scaffold1413 ScafM SNP 0034.scaffold00131 171005 1 C T scaffold1413 ScafM SNP 0034.scaffold00131 171031 1 G A scaffold1413 ScafM SNP 0034.scaffold00131 171046 1 T C scaffold1413 ScafM SNP 0034.scaffold00131 171048 2 TC GA scaffold1413 ScafM SNP 0034.scaffold00131 171056 2 TG CC scaffold1413 ScafM INDEL 0034.scaffold00131 171070 1 A . scaffold1413 ScafM SNP 0034.scaffold00131 171112 1 T A scaffold1413 ScafM INDEL 0034.scaffold00131 171113 1 . T scaffold1413 ScafM INDEL 0034.scaffold00131 171118 3 ... ACG scaffold1413 ScafM SNP 0034.scaffold00131 171130 1 A G scaffold1413 ScafM SNP 0034.scaffold00131 171151 1 C G scaffold1413 ScafM INDEL 0034.scaffold00131 171189 1 G . scaffold1413 ScafM INDEL 0034.scaffold00131 171191 1 T . scaffold1413 ScafM INDEL 0034.scaffold00131 171193 1 T . scaffold1413 ScafM SNP 0034.scaffold00131 171201 1 G T scaffold1413 ScafM SNP 0034.scaffold00131 171214 1 G A scaffold1413 ScafM INDEL 0034.scaffold00131 171334 2 AT .. scaffold868 ScafM SNP 0034.scaffold00131 209448 1 A G scaffold6548 ScafM SNP 0034.scaffold00131 209476 1 C T scaffold6548 ScafM INDEL 0034.scaffold00131 209495 3 ACG ... scaffold6548 ScafM SNP 0034.scaffold00131 209547 1 A T scaffold6548 ScafM SNP 0034.scaffold00131 223461 1 C T scaffold6548 ScafM INDEL 0034.scaffold00131 225204 14 .............. CTTGTCTAAAATAT scaffold6548 ScafM SNP 0034.scaffold00131 239628 1 G A scaffold6548 ScafM INDEL 0034.scaffold00131 241328 1 G . scaffold6548 ReadM INDEL 0034.scaffold00131 283770 1 . A - ReadM INDEL 0034.scaffold00131 283830 1 . A - ScafM SNP 0034.scaffold00131 299867 2 GG AT scaffold14310 ScafM INDEL 0034.scaffold00131 299870 1 G . scaffold14310 ScafM SNP 0034.scaffold00131 299873 1 A T scaffold14310 ScafM SNP 0034.scaffold00131 299875 1 G T scaffold14310 ScafM INDEL 0034.scaffold00131 299877 2 GC .T scaffold14310 ScafM SNP 0034.scaffold00131 299881 1 C A scaffold14310 ScafM INDEL 0034.scaffold00131 299885 1 . T scaffold14310 ScafM SNP 0034.scaffold00131 319731 1 A C scaffold14310 ScafM SNP 0034.scaffold00131 355537 1 A C scaffold272 ScafM SNP 0034.scaffold00131 355895 1 A G scaffold272 ReadM INDEL 0034.scaffold00131 448303 1 A . - ScafM INDEL 0034.scaffold00131 461947 14 CTCAGCATTATTAA .............. scaffold138 ScafM INDEL 0034.scaffold00131 461963 1 T . scaffold138 ScafM INDEL 0034.scaffold00131 461966 8 AGAGTAAA ........ scaffold138 ScafM INDEL 0034.scaffold00131 462861 2 AA .. scaffold138 ReadM SNP 0034.scaffold00131 471279 1 C G - ScafM INDEL 0034.scaffold00131 499916 3 CCC ... scaffold138 ScafM SNP 0034.scaffold00131 505247 1 G A scaffold138 ScafM SNP 0034.scaffold00131 505253 1 A C scaffold138 ScafM SNP 0034.scaffold00131 505263 1 A T scaffold138 ScafM SNP 0034.scaffold00131 505326 1 A G scaffold138 ScafM SNP 0034.scaffold00131 505638 1 T C scaffold13044 ScafM INDEL 0034.scaffold00131 505664 2 TA .. scaffold13044 ScafM SNP 0034.scaffold00131 505745 1 C T scaffold13044 ScafM SNP 0034.scaffold00131 505773 1 C T scaffold13044 ScafM INDEL 0034.scaffold00131 505789 3 TAT ... scaffold13044 ScafM SNP 0034.scaffold00131 505823 2 AT TC scaffold13044 ScafM SNP 0034.scaffold00131 505845 1 G A scaffold13044 ScafM SNP 0034.scaffold00131 505892 1 T C scaffold13044 ScafM SNP 0034.scaffold00131 505915 1 T C scaffold13044 ScafM SNP 0034.scaffold00131 505918 1 C T scaffold13044 ScafM SNP 0034.scaffold00131 505927 1 T G scaffold13044 ScafM SNP 0034.scaffold00131 505972 1 T C scaffold13044 ScafM SNP 0034.scaffold00131 505974 1 A C scaffold13044 ScafM SNP 0034.scaffold00131 506036 1 C T scaffold13044 ScafM SNP 0034.scaffold00131 506045 2 AA GG scaffold13044 ScafM SNP 0034.scaffold00131 506052 1 G T scaffold13044 ScafM SNP 0034.scaffold00131 506058 1 T C scaffold13044 ScafM SNP 0034.scaffold00131 506121 2 GT AG scaffold13044 ScafM SNP 0034.scaffold00131 506141 1 T C scaffold13044 ScafM SNP 0034.scaffold00131 506198 1 G A scaffold6167 ScafM SNP 0034.scaffold00131 506206 1 G A scaffold6167 ScafM SNP 0034.scaffold00131 506210 1 C G scaffold6167 ScafM SNP 0034.scaffold00131 506216 1 T C scaffold6167 ScafM SNP 0034.scaffold00131 506229 1 A G scaffold6167 ScafM SNP 0034.scaffold00131 506303 1 A G scaffold6167 ScafM SNP 0034.scaffold00131 506339 1 A G scaffold6167 ScafM INDEL 0034.scaffold00131 506345 6 TGCGCA ...... scaffold6167 ScafM SNP 0034.scaffold00131 526191 1 C A scaffold138 ReadM SNP 0034.scaffold00131 528880 1 G A - ReadM INDEL 0034.scaffold00131 539026 1 T . - ScafM INDEL 0034.scaffold00131 544809 4 AGCT .... scaffold138 ScafM INDEL 0034.scaffold00131 544814 2 AG .. scaffold138 ScafM INDEL 0034.scaffold00131 544817 8 ATTATTAA ........ scaffold138 ScafM INDEL 0034.scaffold00131 544827 1 T . scaffold138 ScafM INDEL 0034.scaffold00131 549280 34 .................................. AGAGTGATGTACTCAAAGTTAACACATTGCTATA scaffold138 ScafM SNP 0034.scaffold00131 549319 1 A T scaffold138 ScafM SNP 0034.scaffold00131 549333 1 A T scaffold138 ScafM SNP 0034.scaffold00131 549468 1 C T scaffold138 ScafM SNP 0034.scaffold00131 549536 1 C G scaffold138 ScafM SNP 0034.scaffold00131 549551 1 C G scaffold138 ScafM SNP 0034.scaffold00131 549610 1 A G scaffold138 ReadM SNP 0034.scaffold00131 562506 1 G A - ScafM INDEL 0034.scaffold00131 590437 1 . A scaffold6803 ScafM SNP 0034.scaffold00131 620736 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 620760 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 620766 1 G C scaffold6984 ScafM SNP 0034.scaffold00131 620795 1 A G scaffold6984 ScafM SNP 0034.scaffold00131 620826 1 G C scaffold6984 ScafM SNP 0034.scaffold00131 620875 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 620898 1 T G scaffold6984 ScafM SNP 0034.scaffold00131 620924 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 620946 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 620961 1 T A scaffold6984 ScafM SNP 0034.scaffold00131 620989 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 620998 2 TT GC scaffold6984 ScafM SNP 0034.scaffold00131 621115 1 C A scaffold6984 ScafM SNP 0034.scaffold00131 621162 1 T C scaffold6984 ScafM INDEL 0034.scaffold00131 621225 1 . A scaffold6984 ScafM SNP 0034.scaffold00131 621303 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 621329 1 C A scaffold6984 ScafM SNP 0034.scaffold00131 621375 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 621402 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 621668 1 A G scaffold6984 ScafM SNP 0034.scaffold00131 621733 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 621769 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 621783 1 A T scaffold6984 ScafM SNP 0034.scaffold00131 621799 1 T C scaffold6984 ScafM SNP 0034.scaffold00131 621850 1 C A scaffold6984 ScafM SNP 0034.scaffold00131 621852 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 621869 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 621963 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 621967 2 TT CG scaffold6984 ScafM SNP 0034.scaffold00131 622170 1 G C scaffold6984 ScafM SNP 0034.scaffold00131 622183 1 A T scaffold6984 ScafM SNP 0034.scaffold00131 622237 1 C G scaffold6984 ScafM SNP 0034.scaffold00131 622252 1 C G scaffold6984 ScafM SNP 0034.scaffold00131 622257 2 TA CT scaffold6984 ScafM SNP 0034.scaffold00131 622289 1 C A scaffold6984 ScafM SNP 0034.scaffold00131 622293 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 622365 1 C A scaffold6984 ScafM INDEL 0034.scaffold00131 622419 1 . C scaffold6984 ScafM INDEL 0034.scaffold00131 622458 10 .......... ATCAACCACA scaffold6984 ScafM SNP 0034.scaffold00131 622470 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 622507 1 A C scaffold6984 ScafM SNP 0034.scaffold00131 622509 1 A G scaffold6984 ScafM SNP 0034.scaffold00131 622570 1 A G scaffold6984 ScafM SNP 0034.scaffold00131 622589 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 622625 2 TG CT scaffold6984 ScafM SNP 0034.scaffold00131 622666 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 622669 1 T A scaffold6984 ScafM SNP 0034.scaffold00131 622686 1 G A scaffold6984 ScafM SNP 0034.scaffold00131 622693 1 C T scaffold6984 ScafM INDEL 0034.scaffold00131 622705 20 TTGATCGATGAAATGTGATG .................... scaffold6984 ScafM SNP 0034.scaffold00131 623005 1 T G scaffold6984 ScafM SNP 0034.scaffold00131 623059 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 623110 1 A T scaffold6984 ScafM SNP 0034.scaffold00131 623119 1 C A scaffold6984 ScafM SNP 0034.scaffold00131 623210 1 C T scaffold6984 ScafM SNP 0034.scaffold00131 623973 2 TA AT scaffold4838 ScafM SNP 0034.scaffold00131 636408 1 C T scaffold4838 ScafM INDEL 0034.scaffold00131 653070 1 . T scaffold9776 ScafM INDEL 0034.scaffold00131 653155 2 AA .. scaffold9776 ScafM SNP 0034.scaffold00131 653159 1 C T scaffold9776 ScafM SNP 0034.scaffold00131 653469 1 G C scaffold49706 ScafM SNP 0034.scaffold00131 654105 1 G T scaffold13701 ScafM SNP 0034.scaffold00131 654144 1 A C scaffold13701 ScafM SNP 0034.scaffold00131 657668 1 C A scaffold3129 ScafM SNP 0034.scaffold00131 657715 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 657723 1 A G scaffold3129 ScafM SNP 0034.scaffold00131 657730 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 657767 1 C G scaffold3129 ScafM INDEL 0034.scaffold00131 657788 1 A . scaffold3129 ScafM SNP 0034.scaffold00131 657799 1 A G scaffold3129 ScafM INDEL 0034.scaffold00131 657803 3 TTA ... scaffold3129 ScafM INDEL 0034.scaffold00131 657807 1 T . scaffold3129 ScafM SNP 0034.scaffold00131 657831 1 T A scaffold3129 ScafM SNP 0034.scaffold00131 657867 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 657872 1 T A scaffold3129 ScafM SNP 0034.scaffold00131 657886 1 T C scaffold3129 ScafM SNP 0034.scaffold00131 657896 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 657936 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 657948 1 A G scaffold3129 ScafM SNP 0034.scaffold00131 657977 1 A C scaffold3129 ScafM SNP 0034.scaffold00131 657983 1 A G scaffold3129 ScafM SNP 0034.scaffold00131 658005 1 G T scaffold3129 ScafM SNP 0034.scaffold00131 658063 1 A G scaffold3129 ScafM SNP 0034.scaffold00131 658065 1 G C scaffold3129 ScafM INDEL 0034.scaffold00131 658083 3 TTC ... scaffold3129 ScafM SNP 0034.scaffold00131 658088 1 T A scaffold3129 ScafM SNP 0034.scaffold00131 658106 1 G T scaffold3129 ScafM INDEL 0034.scaffold00131 658113 2 .T CA scaffold3129 ScafM SNP 0034.scaffold00131 658134 1 T G scaffold3129 ScafM SNP 0034.scaffold00131 658181 1 A T scaffold3129 ScafM SNP 0034.scaffold00131 658205 1 A G scaffold3129 ScafM SNP 0034.scaffold00131 658216 1 T C scaffold3129 ScafM INDEL 0034.scaffold00131 658221 4 .... TAGC scaffold3129 ScafM SNP 0034.scaffold00131 658243 2 CT AA scaffold3129 ScafM SNP 0034.scaffold00131 658312 1 G A scaffold3129 ScafM SNP 0034.scaffold00131 658316 1 G T scaffold3129 ScafM SNP 0034.scaffold00131 658318 1 A T scaffold3129 ScafM INDEL 0034.scaffold00131 658326 1 . G scaffold3129 ScafM SNP 0034.scaffold00131 658333 1 T A scaffold3129 ScafM SNP 0034.scaffold00131 658339 1 T A scaffold3129 ScafM SNP 0034.scaffold00131 658352 1 C T scaffold3129 ScafM SNP 0034.scaffold00131 658360 1 C A scaffold3129 ScafM SNP 0034.scaffold00131 658376 2 CG AT scaffold3129 ScafM SNP 0034.scaffold00131 662469 1 A G scaffold11556 ScafM INDEL 0034.scaffold00131 663090 3 ... TAA scaffold5702 ScafM INDEL 0034.scaffold00131 663102 1 . G scaffold5702 ScafM SNP 0034.scaffold00131 663139 1 G A scaffold5702 ScafM SNP 0034.scaffold00131 663163 1 C T scaffold5702 ScafM SNP 0034.scaffold00131 663184 1 C A scaffold5702 ScafM INDEL 0034.scaffold00131 663253 4 ATTA .... scaffold5702 ScafM SNP 0034.scaffold00131 663273 1 G A scaffold5702 ScafM INDEL 0034.scaffold00131 676130 21 AAACCCCAATTGTCATCTTCT ..................... scaffold4639 ScafM SNP 0034.scaffold00131 694581 1 C T scaffold4639 ScafM SNP 0034.scaffold00131 710997 1 T C scaffold4639 ScafM INDEL 0034.scaffold00131 754990 12 GGGGGGATAAGG ............ scaffold4639 ScafM INDEL 0034.scaffold00131 767895 1 . T scaffold35609 ScafM SNP 0034.scaffold00131 770196 1 C T scaffold43085 ScafM SNP 0034.scaffold00131 770495 1 A T scaffold43085 ScafM SNP 0034.scaffold00131 778933 1 T C scaffold15298 ScafM SNP 0034.scaffold00131 778947 2 GT CA scaffold15298 ScafM SNP 0034.scaffold00131 778967 1 C A scaffold15298 ScafM SNP 0034.scaffold00131 778994 1 A G scaffold15298 ScafM INDEL 0034.scaffold00131 781682 1 . A scaffold15298 ScafM INDEL 0034.scaffold00131 836395 1 . A scaffold1705 ReadM SNP 0034.scaffold00131 840207 1 T C - ScafM SNP 0034.scaffold00131 868137 2 AT TG scaffold1705 ScafM SNP 0034.scaffold00131 868158 1 C A scaffold1705 ScafM SNP 0034.scaffold00131 868174 1 A C scaffold1705 ScafM SNP 0034.scaffold00131 868203 1 G T scaffold1705 ScafM SNP 0034.scaffold00131 868216 1 C T scaffold1705 ScafM SNP 0034.scaffold00131 868381 1 G A scaffold8192 ScafM INDEL 0034.scaffold00131 868470 1 T . scaffold8192 ScafM SNP 0034.scaffold00131 868503 1 C T scaffold8192 ScafM SNP 0034.scaffold00131 870943 1 C G scaffold1705 ScafM SNP 0034.scaffold00131 870947 1 G A scaffold1705 ScafM INDEL 0034.scaffold00131 871249 10 .......... CCTCAATGCA scaffold1705 ScafM SNP 0034.scaffold00131 871281 1 A G scaffold1705 ScafM SNP 0034.scaffold00131 871330 1 A G scaffold1705 ScafM SNP 0034.scaffold00131 871334 1 C G scaffold1705 ScafM SNP 0034.scaffold00131 871358 1 G A scaffold1705 ScafM INDEL 0034.scaffold00131 871366 35 AATACTCTTCACAATCATACTGTAATATGTTCCTG ................................... scaffold1705 ScafM SNP 0034.scaffold00131 871436 1 A T scaffold1705 ScafM SNP 0034.scaffold00131 879994 1 C G scaffold1705 ScafM INDEL 0034.scaffold00131 880002 2 .T CA scaffold1705 ScafM SNP 0034.scaffold00131 880008 1 G A scaffold1705 ScafM SNP 0034.scaffold00131 880028 1 C G scaffold1705 ScafM SNP 0034.scaffold00131 880030 1 A C scaffold1705 ScafM SNP 0034.scaffold00131 880033 1 T G scaffold1705 ScafM INDEL 0034.scaffold00131 880054 1 A . scaffold1705 ScafM SNP 0034.scaffold00131 880061 1 T G scaffold1705 ScafM SNP 0034.scaffold00131 880070 1 C G scaffold1705 ScafM SNP 0034.scaffold00131 880089 1 C G scaffold1705 ScafM SNP 0034.scaffold00131 880102 1 C A scaffold1705 ScafM INDEL 0034.scaffold00131 880104 2 .T CA scaffold1705 ScafM SNP 0034.scaffold00131 921945 1 A G scaffold1705 ScafM SNP 0034.scaffold00131 921947 1 T G scaffold1705 ScafM SNP 0034.scaffold00131 939117 1 T C scaffold10409 ScafM SNP 0034.scaffold00131 939141 1 A T scaffold10409 Both INDEL 0034.scaffold00131 968015 1 . A scaffold1705 ScafM INDEL 0034.scaffold00131 975365 8 ........ TCTAGGAG scaffold11059 ScafM SNP 0034.scaffold00131 975398 1 C A scaffold11059 ScafM INDEL 0034.scaffold00131 975400 1 C . scaffold11059 ScafM SNP 0034.scaffold00131 975402 1 C G scaffold11059 ScafM INDEL 0034.scaffold00131 975421 2 .. AT scaffold11059 ScafM SNP 0034.scaffold00131 975423 1 C G scaffold11059 ScafM SNP 0034.scaffold00131 975437 1 T C scaffold11059 ScafM SNP 0034.scaffold00131 975462 1 T C scaffold11059 ScafM INDEL 0034.scaffold00131 976985 2 AG .. scaffold1705 ScafM SNP 0034.scaffold00131 977343 1 A G scaffold1705 ScafM SNP 0034.scaffold00131 977406 1 G A scaffold1705 ScafM SNP 0034.scaffold00131 977499 1 C A scaffold1705 ScafM SNP 0034.scaffold00131 977637 1 A G scaffold1705 ScafM SNP 0034.scaffold00131 979900 1 C G scaffold1705 ReadM SNP 0034.scaffold00131 990919 1 C T - ScafM INDEL 0034.scaffold00131 998066 1 . C scaffold12127 ReadM SNP 0034.scaffold00131 1021811 1 C A - ScafM INDEL 0034.scaffold00131 1023469 1 A . scaffold1221 ScafM SNP 0034.scaffold00131 1023506 1 T G scaffold1221 ScafM INDEL 0034.scaffold00131 1058784 1 T . scaffold11059 ScafM INDEL 0034.scaffold00131 1058786 2 .. TT scaffold11059 ScafM SNP 0035.scaffold00136 6843 1 G A scaffold48553 ScafM SNP 0035.scaffold00136 6881 1 T A scaffold48553 ScafM SNP 0035.scaffold00136 6964 1 T C scaffold48553 ScafM SNP 0035.scaffold00136 6966 1 A G scaffold48553 ScafM SNP 0035.scaffold00136 7009 1 C A scaffold48553 ScafM SNP 0035.scaffold00136 7022 1 C T scaffold48553 ScafM INDEL 0035.scaffold00136 7032 1 . T scaffold48553 ScafM INDEL 0035.scaffold00136 7070 1 T . scaffold48553 ScafM INDEL 0035.scaffold00136 7073 1 . T scaffold48553 ReadM SNP 0035.scaffold00136 7229 1 T C - ScafM SNP 0035.scaffold00136 9850 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 9857 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 9873 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 9886 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 9901 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 9909 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 9913 2 GC TT scaffold8003 ScafM SNP 0035.scaffold00136 9938 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 9941 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 9955 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 9983 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10005 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 10007 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 10009 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10019 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 10027 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 10029 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10031 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 10033 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10037 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10051 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 10057 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10065 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10067 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 10091 3 GTA ... scaffold8003 ScafM INDEL 0035.scaffold00136 10098 1 C . scaffold8003 ScafM SNP 0035.scaffold00136 10105 2 TG GT scaffold8003 ScafM INDEL 0035.scaffold00136 10110 1 . T scaffold8003 ScafM INDEL 0035.scaffold00136 10112 1 . A scaffold8003 ScafM SNP 0035.scaffold00136 10114 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 10117 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 10119 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10123 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 10140 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10149 1 A G scaffold8003 ScafM INDEL 0035.scaffold00136 10151 1 C . scaffold8003 ScafM INDEL 0035.scaffold00136 10157 1 T . scaffold8003 ScafM SNP 0035.scaffold00136 10180 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10210 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 10215 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10231 2 CC TT scaffold8003 ScafM SNP 0035.scaffold00136 10242 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 10246 3 CTT ... scaffold8003 ScafM SNP 0035.scaffold00136 10259 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 10264 2 CG AA scaffold8003 ScafM SNP 0035.scaffold00136 10270 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 10273 1 A . scaffold8003 ScafM SNP 0035.scaffold00136 10281 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 10285 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 10295 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10301 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10305 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 10309 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10311 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10320 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10323 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10333 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10345 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 10348 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10357 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 10367 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 10383 3 TTG ACA scaffold8003 ScafM INDEL 0035.scaffold00136 10409 2 .C TA scaffold8003 ScafM SNP 0035.scaffold00136 10412 2 GT TA scaffold8003 ScafM INDEL 0035.scaffold00136 10415 2 .. GC scaffold8003 ScafM INDEL 0035.scaffold00136 10416 1 . G scaffold8003 ScafM SNP 0035.scaffold00136 10419 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10421 3 GGG TTT scaffold8003 ScafM SNP 0035.scaffold00136 10429 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 10432 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10451 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10464 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 10479 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 10481 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 10496 1 C . scaffold8003 ScafM SNP 0035.scaffold00136 10498 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10510 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10552 1 T C scaffold8003 ScafM INDEL 0035.scaffold00136 10555 1 T . scaffold8003 ScafM SNP 0035.scaffold00136 10559 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 10571 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 10573 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10586 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10588 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10623 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10645 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10656 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10659 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 10678 2 GA AG scaffold8003 ScafM SNP 0035.scaffold00136 10682 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10687 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 10693 1 G . scaffold8003 ScafM INDEL 0035.scaffold00136 10697 1 . C scaffold8003 ScafM INDEL 0035.scaffold00136 10719 1 T . scaffold8003 ScafM SNP 0035.scaffold00136 10724 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10736 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 10760 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 10765 7 GAACATA ....... scaffold8003 ScafM SNP 0035.scaffold00136 10791 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10853 2 GA TT scaffold8003 ScafM SNP 0035.scaffold00136 10865 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 10872 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 10879 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 10889 2 AT GG scaffold8003 ScafM SNP 0035.scaffold00136 10910 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10920 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 10928 2 CC TT scaffold8003 ScafM SNP 0035.scaffold00136 10935 2 GG TA scaffold8003 ScafM SNP 0035.scaffold00136 10953 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10976 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 10982 2 AT GA scaffold8003 ScafM SNP 0035.scaffold00136 10988 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 10990 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 10999 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 11006 1 . C scaffold8003 ScafM SNP 0035.scaffold00136 11009 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11013 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 11069 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 11085 1 C . scaffold8003 ScafM SNP 0035.scaffold00136 11096 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11159 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11165 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11171 2 GG AA scaffold8003 ScafM SNP 0035.scaffold00136 11174 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 11180 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11184 1 C G scaffold8003 ScafM SNP 0035.scaffold00136 11189 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11208 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11216 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11224 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11234 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11247 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11253 2 TT AC scaffold8003 ScafM SNP 0035.scaffold00136 11256 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11259 2 GT AC scaffold8003 ScafM INDEL 0035.scaffold00136 11268 2 .. TT scaffold8003 ScafM SNP 0035.scaffold00136 11280 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 11289 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11297 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11329 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 11338 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11346 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11375 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11378 2 CA GC scaffold8003 ScafM SNP 0035.scaffold00136 11388 1 A T scaffold8003 ScafM INDEL 0035.scaffold00136 11399 1 . T scaffold8003 ScafM INDEL 0035.scaffold00136 11412 1 T . scaffold8003 ScafM INDEL 0035.scaffold00136 11430 1 . A scaffold8003 ScafM SNP 0035.scaffold00136 11436 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 11458 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11464 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 11468 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 11471 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11481 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11489 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 11505 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 11509 3 ATT ... scaffold8003 ScafM SNP 0035.scaffold00136 11521 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11556 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11591 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 11611 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11618 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 11624 1 A . scaffold8003 ScafM SNP 0035.scaffold00136 11628 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 11634 1 . T scaffold8003 ScafM SNP 0035.scaffold00136 11637 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 11670 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 11676 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11683 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 11685 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11690 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11697 2 TT CC scaffold8003 ScafM SNP 0035.scaffold00136 11712 1 A C scaffold8003 ScafM INDEL 0035.scaffold00136 11739 2 TT .. scaffold8003 ScafM SNP 0035.scaffold00136 11760 1 A T scaffold8003 ScafM INDEL 0035.scaffold00136 11766 6 ...... AACTTG scaffold8003 ScafM SNP 0035.scaffold00136 11799 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 11808 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 11814 1 G . scaffold8003 ScafM SNP 0035.scaffold00136 11817 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 11840 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 11842 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11851 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11868 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 11879 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11885 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11892 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 11914 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11919 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 11923 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 11938 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 11940 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11958 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 11969 1 A G scaffold8003 ScafM INDEL 0035.scaffold00136 11993 2 AC .T scaffold8003 ScafM SNP 0035.scaffold00136 12002 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 12005 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 12016 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12018 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 12022 1 T C scaffold8003 ScafM INDEL 0035.scaffold00136 12025 2 .. TC scaffold8003 ScafM SNP 0035.scaffold00136 12042 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12052 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 12055 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 12061 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12084 1 A G scaffold8003 ScafM INDEL 0035.scaffold00136 12105 1 . A scaffold8003 ScafM SNP 0035.scaffold00136 12116 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12125 3 CTT TCC scaffold8003 ScafM SNP 0035.scaffold00136 12135 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12139 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12172 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12175 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 12182 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12186 1 C A scaffold8003 ScafM INDEL 0035.scaffold00136 12206 1 C . scaffold8003 ScafM SNP 0035.scaffold00136 12225 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 12248 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 12260 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12263 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 12269 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12271 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12273 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12331 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 12339 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 12350 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 12356 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 12361 1 A G scaffold8003 ScafM INDEL 0035.scaffold00136 12363 1 G . scaffold8003 ScafM SNP 0035.scaffold00136 12373 1 C G scaffold8003 ScafM INDEL 0035.scaffold00136 12378 1 . A scaffold8003 ScafM SNP 0035.scaffold00136 12397 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12421 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12423 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12427 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 12431 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 12450 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 12458 2 TT AC scaffold8003 ScafM SNP 0035.scaffold00136 12475 1 C G scaffold8003 ScafM SNP 0035.scaffold00136 12480 2 TC GT scaffold8003 ScafM SNP 0035.scaffold00136 12489 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 12492 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12495 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 12500 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12508 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 12510 1 . T scaffold8003 ScafM SNP 0035.scaffold00136 12513 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12537 2 TC CT scaffold8003 ScafM SNP 0035.scaffold00136 12547 2 GA TG scaffold8003 ScafM SNP 0035.scaffold00136 12559 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12561 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12575 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 12593 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 12596 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12601 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12604 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12622 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12641 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12660 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 12664 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12675 1 G A scaffold8003 ReadM SNP 0035.scaffold00136 12702 1 T C - ScafM SNP 0035.scaffold00136 12702 2 TC CA scaffold8003 ScafM SNP 0035.scaffold00136 12707 2 CG AA scaffold8003 ScafM SNP 0035.scaffold00136 12734 1 G T scaffold8003 ReadM SNP 0035.scaffold00136 12738 1 T C - ScafM INDEL 0035.scaffold00136 12738 3 TTG .CC scaffold8003 ScafM SNP 0035.scaffold00136 12744 1 G T scaffold8003 ReadM SNP 0035.scaffold00136 12760 1 C T - ScafM SNP 0035.scaffold00136 12761 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 12803 1 T A scaffold8003 ScafM INDEL 0035.scaffold00136 12807 3 TTT ... scaffold8003 Both SNP 0035.scaffold00136 12815 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12828 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 12840 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12847 1 C A scaffold8003 ScafM INDEL 0035.scaffold00136 12851 1 . G scaffold8003 ScafM SNP 0035.scaffold00136 12853 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 12862 1 C G scaffold8003 ScafM SNP 0035.scaffold00136 12871 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 12876 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 12889 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 12897 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 12925 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 12951 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12961 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 12965 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 12967 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 12969 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13004 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13022 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13028 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 13054 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13080 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 13082 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 13092 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 13105 1 T G scaffold8003 ScafM INDEL 0035.scaffold00136 13109 3 ... GAC scaffold8003 ScafM SNP 0035.scaffold00136 13123 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13163 1 T A scaffold8003 ScafM SNP 0035.scaffold00136 13190 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13204 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13210 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 13212 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13216 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13241 1 C T scaffold8003 ScafM INDEL 0035.scaffold00136 13263 1 . C scaffold8003 ScafM SNP 0035.scaffold00136 13265 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 13276 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 13307 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 13314 2 TT GC scaffold8003 ScafM SNP 0035.scaffold00136 13318 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13328 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13334 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 13337 1 C G scaffold8003 ScafM SNP 0035.scaffold00136 13365 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 13368 1 G C scaffold8003 ScafM SNP 0035.scaffold00136 13401 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 13416 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13451 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13457 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13462 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13475 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13486 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13488 2 CA TT scaffold8003 ScafM INDEL 0035.scaffold00136 13501 1 . G scaffold8003 ScafM INDEL 0035.scaffold00136 13524 1 T . scaffold8003 ScafM SNP 0035.scaffold00136 13539 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13570 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 13577 2 CA TG scaffold8003 ScafM SNP 0035.scaffold00136 13587 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 13592 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13628 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13635 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 13646 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 13651 1 T C scaffold8003 ScafM INDEL 0035.scaffold00136 13659 2 AA .T scaffold8003 ScafM SNP 0035.scaffold00136 13665 1 A T scaffold8003 ScafM INDEL 0035.scaffold00136 13673 4 .... AGCA scaffold8003 ScafM SNP 0035.scaffold00136 13680 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13698 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 13705 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13709 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13718 1 G A scaffold8003 ScafM INDEL 0035.scaffold00136 13738 1 . A scaffold8003 ScafM SNP 0035.scaffold00136 13743 2 TA AG scaffold8003 ScafM SNP 0035.scaffold00136 13751 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13753 1 A G scaffold8003 ScafM SNP 0035.scaffold00136 13758 1 C T scaffold8003 ScafM SNP 0035.scaffold00136 13796 1 G T scaffold8003 ScafM SNP 0035.scaffold00136 13805 1 T G scaffold8003 ScafM SNP 0035.scaffold00136 13810 1 C A scaffold8003 ScafM SNP 0035.scaffold00136 13818 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13831 1 A T scaffold8003 ScafM SNP 0035.scaffold00136 13850 1 A C scaffold8003 ScafM SNP 0035.scaffold00136 13854 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13864 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13895 1 A T scaffold8003 ScafM INDEL 0035.scaffold00136 13901 6 ATTATA .....C scaffold8003 ScafM SNP 0035.scaffold00136 13911 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13918 2 CA TG scaffold8003 ScafM SNP 0035.scaffold00136 13927 1 G A scaffold8003 ScafM SNP 0035.scaffold00136 13939 1 T C scaffold8003 ScafM SNP 0035.scaffold00136 13941 2 CA GG scaffold8003 ScafM SNP 0035.scaffold00136 13947 1 T A scaffold8003 ScafM INDEL 0035.scaffold00136 13963 1 . T scaffold8003 ScafM SNP 0035.scaffold00136 13966 1 A G scaffold8003 ScafM INDEL 0035.scaffold00136 13971 1 G . scaffold8003 ReadM SNP 0035.scaffold00136 29790 1 T C - ReadM SNP 0035.scaffold00136 29809 1 A C - ReadM SNP 0035.scaffold00136 29827 1 A T - ReadM SNP 0035.scaffold00136 31915 1 G A - ReadM SNP 0035.scaffold00136 31929 1 T C - ReadM SNP 0035.scaffold00136 31950 1 A G - ScafM SNP 0035.scaffold00136 32113 1 C T C19681017 ScafM SNP 0035.scaffold00136 32135 1 G T C19681017 ScafM SNP 0035.scaffold00136 32156 2 AC GT C19681017 ScafM SNP 0035.scaffold00136 32210 1 T G C19681017 ScafM SNP 0035.scaffold00136 32222 1 A G C19681017 ScafM SNP 0035.scaffold00136 32225 1 A G C19681017 Both SNP 0035.scaffold00136 32313 1 G A C19681017 Both SNP 0035.scaffold00136 32320 1 A G C19681017 ScafM INDEL 0035.scaffold00136 32385 3 CGA ... C19681017 ScafM SNP 0035.scaffold00136 32390 1 A G C19681017 ScafM SNP 0035.scaffold00136 32395 1 T C C19681017 ScafM SNP 0035.scaffold00136 32403 1 T C C19681017 ScafM SNP 0035.scaffold00136 32433 1 G T C19681017 ScafM SNP 0035.scaffold00136 32439 1 T G C19681017 ScafM SNP 0035.scaffold00136 32462 1 T C C19681017 ScafM SNP 0035.scaffold00136 32478 1 C T C19681017 ScafM SNP 0035.scaffold00136 32480 1 A G C19681017 ScafM SNP 0035.scaffold00136 32493 1 T G C19681017 ScafM SNP 0035.scaffold00136 32501 1 C T C19681017 ScafM SNP 0035.scaffold00136 32503 1 T C C19681017 ScafM SNP 0035.scaffold00136 32518 1 T C C19681017 ScafM SNP 0035.scaffold00136 32531 1 A G C19681017 ScafM SNP 0035.scaffold00136 32544 1 G C C19681017 ScafM SNP 0035.scaffold00136 32547 1 G A C19681017 ScafM SNP 0035.scaffold00136 32557 1 A C C19681017 ScafM SNP 0035.scaffold00136 32560 1 G A C19681017 ScafM SNP 0035.scaffold00136 32578 1 C T C19681017 ScafM SNP 0035.scaffold00136 32580 1 C T C19681017 ScafM INDEL 0035.scaffold00136 32630 7 AAGTAAG ....... C19681017 ScafM SNP 0035.scaffold00136 32674 1 T C C19681017 ScafM SNP 0035.scaffold00136 32725 1 A G C19681017 ScafM SNP 0035.scaffold00136 32728 2 GT AC C19681017 ScafM SNP 0035.scaffold00136 32747 1 A C C19681017 ScafM SNP 0035.scaffold00136 32750 1 T C C19681017 ScafM SNP 0035.scaffold00136 32777 1 T C C19681017 ScafM SNP 0035.scaffold00136 32911 1 T C C19681017 ScafM SNP 0035.scaffold00136 32918 1 T G C19681017 ScafM SNP 0035.scaffold00136 32928 1 T C C19681017 ScafM SNP 0035.scaffold00136 32936 1 G A C19681017 ScafM INDEL 0035.scaffold00136 32946 4 .... TTAA C19681017 ScafM SNP 0035.scaffold00136 32950 1 C T C19681017 ScafM SNP 0035.scaffold00136 32966 1 G C C19681017 ScafM SNP 0035.scaffold00136 32976 1 C T C19681017 ScafM SNP 0035.scaffold00136 33031 1 A C C19681017 ScafM SNP 0035.scaffold00136 33090 1 A G C19681017 ScafM SNP 0035.scaffold00136 33102 1 T C C19681017 ScafM SNP 0035.scaffold00136 33124 1 T C C19681017 ScafM SNP 0035.scaffold00136 33132 1 A G C19681017 ScafM SNP 0035.scaffold00136 33134 1 T C C19681017 ReadM SNP 0035.scaffold00136 36159 1 A T - ScafM SNP 0035.scaffold00136 41811 1 T G scaffold51120 ScafM SNP 0035.scaffold00136 42525 1 T C scaffold2202 ScafM SNP 0035.scaffold00136 42558 1 C T scaffold2202 ScafM SNP 0035.scaffold00136 42575 1 A G scaffold2202 ScafM SNP 0035.scaffold00136 42591 1 C G scaffold2202 ReadM SNP 0035.scaffold00136 44149 1 G A - ReadM SNP 0035.scaffold00136 44669 1 A G - ReadM SNP 0035.scaffold00136 45087 1 G T - ReadM SNP 0035.scaffold00136 45174 1 G A - ReadM SNP 0035.scaffold00136 45189 1 A G - ReadM SNP 0035.scaffold00136 45202 1 A T - ReadM SNP 0035.scaffold00136 45347 1 C T - ReadM SNP 0035.scaffold00136 45576 1 T C - ReadM SNP 0035.scaffold00136 45604 1 T G - ReadM SNP 0035.scaffold00136 45671 1 A G - ReadM SNP 0035.scaffold00136 45688 1 A T - ScafM SNP 0035.scaffold00136 45937 1 A T scaffold3987 ScafM SNP 0035.scaffold00136 45947 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 45987 2 TG AA scaffold3987 ScafM SNP 0035.scaffold00136 45993 1 T A scaffold3987 ScafM INDEL 0035.scaffold00136 46013 1 T . scaffold3987 Both INDEL 0035.scaffold00136 46070 1 T . scaffold3987 ScafM SNP 0035.scaffold00136 46078 1 G A scaffold3987 Both SNP 0035.scaffold00136 46100 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 46137 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46155 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 46179 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 46207 1 T G scaffold3987 ScafM SNP 0035.scaffold00136 46236 4 AAAA TTCC scaffold3987 ScafM SNP 0035.scaffold00136 46242 2 AC GT scaffold3987 ScafM SNP 0035.scaffold00136 46246 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46253 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 46256 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46284 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46286 1 C G scaffold3987 ScafM SNP 0035.scaffold00136 46289 1 C G scaffold3987 ScafM SNP 0035.scaffold00136 46335 1 G A scaffold3987 ScafM INDEL 0035.scaffold00136 46377 1 A . scaffold3987 ScafM SNP 0035.scaffold00136 46400 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 46434 1 G T scaffold3987 ScafM SNP 0035.scaffold00136 46447 2 TA CG scaffold3987 ScafM SNP 0035.scaffold00136 46486 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 46549 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46554 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 46579 1 C T scaffold3987 Both SNP 0035.scaffold00136 46633 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 46665 1 A T scaffold3987 ScafM SNP 0035.scaffold00136 46695 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 46697 1 A C scaffold3987 ScafM SNP 0035.scaffold00136 46713 2 GC CT scaffold3987 ScafM SNP 0035.scaffold00136 46725 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 46727 1 G T scaffold3987 ScafM SNP 0035.scaffold00136 46810 1 T A scaffold3987 ScafM SNP 0035.scaffold00136 46814 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 46826 1 A G scaffold3987 ScafM INDEL 0035.scaffold00136 46843 2 .. AT scaffold3987 ScafM INDEL 0035.scaffold00136 46845 2 .. AG scaffold3987 ScafM INDEL 0035.scaffold00136 46846 1 . A scaffold3987 ScafM SNP 0035.scaffold00136 46849 1 G A scaffold3987 ScafM INDEL 0035.scaffold00136 46851 2 .. GT scaffold3987 ScafM SNP 0035.scaffold00136 46906 1 A T scaffold3987 ScafM SNP 0035.scaffold00136 46908 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 46916 1 C A scaffold3987 ScafM SNP 0035.scaffold00136 46929 1 G C scaffold3987 ScafM SNP 0035.scaffold00136 46938 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46982 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46996 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 46999 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 47003 3 TAC CGG scaffold3987 ScafM INDEL 0035.scaffold00136 47006 4 ...A GGTG scaffold3987 ScafM SNP 0035.scaffold00136 47011 3 ATC GCT scaffold3987 ScafM SNP 0035.scaffold00136 47029 1 T C scaffold3987 ScafM INDEL 0035.scaffold00136 47057 15 ............... CCTGTTTCCATCAGG scaffold3987 ScafM INDEL 0035.scaffold00136 47118 1 . A scaffold3987 ScafM SNP 0035.scaffold00136 47135 1 A T scaffold3987 ScafM INDEL 0035.scaffold00136 47160 1 . C scaffold3987 ScafM SNP 0035.scaffold00136 47162 2 TG CA scaffold3987 ScafM SNP 0035.scaffold00136 47205 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 47212 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 47220 1 T A scaffold3987 ScafM INDEL 0035.scaffold00136 47241 1 . C scaffold3987 ScafM SNP 0035.scaffold00136 47243 1 T A scaffold3987 ScafM INDEL 0035.scaffold00136 47272 32 ................................ TGTATATACATGGGCTCCGTGAGCCATGTAAA scaffold3987 ScafM SNP 0035.scaffold00136 47292 1 T C scaffold3987 ReadM SNP 0035.scaffold00136 47831 1 A G - Both SNP 0035.scaffold00136 47872 1 T C scaffold3987 Both INDEL 0035.scaffold00136 47930 1 . A scaffold3987 Both INDEL 0035.scaffold00136 48223 1 . A scaffold3987 Both SNP 0035.scaffold00136 48236 1 G A scaffold3987 Both INDEL 0035.scaffold00136 48292 1 A . scaffold3987 ScafM SNP 0035.scaffold00136 48298 1 A C scaffold3987 Both SNP 0035.scaffold00136 48351 1 A G scaffold3987 Both SNP 0035.scaffold00136 48355 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 48469 1 C A scaffold3987 Both SNP 0035.scaffold00136 48479 1 C T scaffold3987 Both SNP 0035.scaffold00136 48557 1 A G scaffold3987 Both INDEL 0035.scaffold00136 48611 1 . A scaffold3987 ScafM SNP 0035.scaffold00136 48697 1 G T scaffold3987 ReadM SNP 0035.scaffold00136 48748 1 G A - ReadM SNP 0035.scaffold00136 48806 1 A G - ReadM SNP 0035.scaffold00136 48820 1 T C - ReadM SNP 0035.scaffold00136 48939 1 C T - ScafM SNP 0035.scaffold00136 48968 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 48981 1 A C scaffold3987 Both SNP 0035.scaffold00136 49056 1 G A scaffold3987 Both INDEL 0035.scaffold00136 49160 2 TG .. scaffold3987 Both SNP 0035.scaffold00136 49256 1 T A scaffold3987 ReadM SNP 0035.scaffold00136 49326 1 G C - ReadM SNP 0035.scaffold00136 49617 1 C T - ReadM SNP 0035.scaffold00136 50203 1 T A - Both SNP 0035.scaffold00136 50477 1 A G scaffold3987 Both SNP 0035.scaffold00136 50535 1 A G scaffold3987 Both SNP 0035.scaffold00136 50628 1 G C scaffold3987 ScafM INDEL 0035.scaffold00136 50645 1 T . scaffold3987 Both SNP 0035.scaffold00136 50665 1 C T scaffold3987 ScafM INDEL 0035.scaffold00136 50704 3 TAG ... scaffold3987 ScafM SNP 0035.scaffold00136 50831 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 50880 1 T G scaffold3987 ScafM SNP 0035.scaffold00136 50884 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 50892 2 GA AT scaffold3987 ScafM SNP 0035.scaffold00136 50926 2 GC CT scaffold3987 ScafM SNP 0035.scaffold00136 50932 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 50944 1 T A scaffold3987 ScafM SNP 0035.scaffold00136 50946 1 C T scaffold3987 ScafM SNP 0035.scaffold00136 50980 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 50985 1 C G scaffold3987 ScafM SNP 0035.scaffold00136 51000 1 C A scaffold3987 ScafM SNP 0035.scaffold00136 51008 1 T A scaffold3987 ScafM SNP 0035.scaffold00136 51027 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 51042 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 51086 1 A C scaffold3987 ScafM SNP 0035.scaffold00136 51115 1 G T scaffold3987 ScafM SNP 0035.scaffold00136 51124 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 51131 1 C G scaffold3987 ScafM SNP 0035.scaffold00136 51202 1 G T scaffold3987 ScafM SNP 0035.scaffold00136 51232 1 C G scaffold3987 ScafM SNP 0035.scaffold00136 51250 1 T C scaffold3987 ScafM SNP 0035.scaffold00136 51263 1 G A scaffold3987 ScafM SNP 0035.scaffold00136 51273 1 A G scaffold3987 ScafM SNP 0035.scaffold00136 51286 1 G A scaffold3987 ReadM SNP 0035.scaffold00136 51405 1 C A - ReadM SNP 0035.scaffold00136 51445 1 A G - ReadM SNP 0035.scaffold00136 52715 1 T C - ReadM SNP 0035.scaffold00136 53238 1 A G - ReadM SNP 0035.scaffold00136 53358 1 A T - ReadM SNP 0035.scaffold00136 53417 1 T C - ScafM SNP 0035.scaffold00136 53874 1 C T scaffold20997 ScafM SNP 0035.scaffold00136 53910 1 C A scaffold20997 Both SNP 0035.scaffold00136 54008 1 C A scaffold20997 ScafM INDEL 0035.scaffold00136 54036 1 C . scaffold20997 ScafM SNP 0035.scaffold00136 54140 2 AA GT scaffold20997 ScafM SNP 0035.scaffold00136 54150 1 A C scaffold20997 ScafM INDEL 0035.scaffold00136 54219 2 GA .. scaffold20997 ScafM INDEL 0035.scaffold00136 54275 4 .... GACA scaffold20997 ScafM SNP 0035.scaffold00136 54304 1 T C scaffold20997 Both SNP 0035.scaffold00136 54337 1 C T scaffold20997 ScafM SNP 0035.scaffold00136 54368 1 C T scaffold20997 ScafM SNP 0035.scaffold00136 54380 1 A C scaffold20997 ScafM SNP 0035.scaffold00136 54671 1 T C scaffold20997 ScafM SNP 0035.scaffold00136 54673 1 C T scaffold20997 ScafM SNP 0035.scaffold00136 54812 1 G A scaffold20997 Both SNP 0035.scaffold00136 54909 1 G A scaffold20997 Both SNP 0035.scaffold00136 54923 1 C G scaffold20997 ScafM SNP 0035.scaffold00136 54971 1 C A scaffold20997 ScafM SNP 0035.scaffold00136 55192 1 C A scaffold20997 Both SNP 0035.scaffold00136 55311 1 A C scaffold20997 ScafM SNP 0035.scaffold00136 55875 1 G A scaffold20997 ScafM SNP 0035.scaffold00136 55884 2 AT GC scaffold20997 ScafM SNP 0035.scaffold00136 55905 1 A G scaffold20997 ScafM SNP 0035.scaffold00136 55944 1 T C scaffold20997 ScafM INDEL 0035.scaffold00136 55961 8 ATAAATAC ........ scaffold20997 ScafM SNP 0035.scaffold00136 55977 1 A G scaffold20997 ScafM SNP 0035.scaffold00136 56038 1 T C scaffold20997 ScafM SNP 0035.scaffold00136 56040 1 G T scaffold20997 ScafM SNP 0035.scaffold00136 56294 1 T A scaffold20997 ScafM SNP 0035.scaffold00136 56362 1 A G scaffold20997 ScafM SNP 0035.scaffold00136 56481 1 G A scaffold20997 ScafM INDEL 0035.scaffold00136 56500 3 GAA ... scaffold20997 ScafM INDEL 0035.scaffold00136 56620 1 . T scaffold20997 ScafM SNP 0035.scaffold00136 56701 1 G A scaffold20997 ScafM SNP 0035.scaffold00136 56708 1 T G scaffold20997 ScafM SNP 0035.scaffold00136 56719 1 G A scaffold20997 ScafM INDEL 0035.scaffold00136 56790 8 ........ GAGAGAAA scaffold20997 ScafM INDEL 0035.scaffold00136 57001 1 . T scaffold20997 ScafM SNP 0035.scaffold00136 57130 1 A T scaffold20997 ScafM SNP 0035.scaffold00136 57139 1 A G scaffold20997 ScafM INDEL 0035.scaffold00136 57222 1 T . scaffold20997 ScafM SNP 0035.scaffold00136 57250 1 A T scaffold20997 ScafM SNP 0035.scaffold00136 57288 1 G A scaffold20997 ScafM SNP 0035.scaffold00136 57303 1 A T scaffold20997 ScafM INDEL 0035.scaffold00136 57337 1 . A scaffold20997 ScafM SNP 0035.scaffold00136 57343 1 A C scaffold20997 ScafM SNP 0035.scaffold00136 57404 1 A G scaffold20997 ScafM SNP 0035.scaffold00136 57629 1 C A scaffold3987 ScafM SNP 0035.scaffold00136 57754 1 G C scaffold3987 ScafM SNP 0035.scaffold00136 57808 1 C A scaffold3987 ReadM SNP 0035.scaffold00136 57866 1 T C - ReadM SNP 0035.scaffold00136 58458 1 T A - ReadM SNP 0035.scaffold00136 58522 1 G A - ReadM SNP 0035.scaffold00136 58706 1 A C - ReadM SNP 0035.scaffold00136 58720 1 C T - ScafM SNP 0035.scaffold00136 58774 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 58814 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 58828 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 58916 1 A C scaffold12973 ScafM SNP 0035.scaffold00136 59073 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 59119 1 T A scaffold12973 ScafM SNP 0035.scaffold00136 59124 2 AG CA scaffold12973 ScafM SNP 0035.scaffold00136 59134 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 59174 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 59201 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 59235 1 G C scaffold12973 ScafM SNP 0035.scaffold00136 59241 1 C G scaffold12973 ScafM SNP 0035.scaffold00136 59250 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 59262 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 59273 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 59289 1 G T scaffold12973 ScafM SNP 0035.scaffold00136 59365 1 T G scaffold12973 Both SNP 0035.scaffold00136 59408 1 C A scaffold12973 ScafM INDEL 0035.scaffold00136 59418 21 ..................... AAATGCAAAGCTATAAATACT scaffold12973 Both SNP 0035.scaffold00136 59496 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 59592 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 59736 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 59881 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 60077 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 60110 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 60116 2 GG AC scaffold12973 ScafM SNP 0035.scaffold00136 60150 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 60183 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 60221 1 A C scaffold12973 ScafM SNP 0035.scaffold00136 60437 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 60792 2 CT TC scaffold12973 ScafM SNP 0035.scaffold00136 60881 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 60890 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 60900 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 60902 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 60979 1 A C scaffold12973 Both SNP 0035.scaffold00136 60999 1 C G scaffold12973 Both SNP 0035.scaffold00136 61018 1 C G scaffold12973 ReadM SNP 0035.scaffold00136 61126 1 A G - ReadM SNP 0035.scaffold00136 61348 1 C T - ReadM SNP 0035.scaffold00136 61464 1 T C - Both SNP 0035.scaffold00136 62628 1 T C scaffold12973 ScafM INDEL 0035.scaffold00136 62688 3 ... GGC scaffold12973 ScafM SNP 0035.scaffold00136 62704 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 62713 1 G A scaffold12973 ScafM INDEL 0035.scaffold00136 62744 1 . T scaffold12973 ScafM INDEL 0035.scaffold00136 62782 1 . A scaffold12973 ScafM SNP 0035.scaffold00136 62901 2 TC AT scaffold12973 ScafM SNP 0035.scaffold00136 62924 1 C G scaffold12973 ScafM SNP 0035.scaffold00136 62952 1 A T scaffold12973 Both SNP 0035.scaffold00136 62999 1 C T scaffold12973 Both SNP 0035.scaffold00136 63010 1 A G scaffold12973 Both SNP 0035.scaffold00136 63018 1 C T scaffold12973 Both SNP 0035.scaffold00136 63244 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 63259 1 G A scaffold12973 ScafM INDEL 0035.scaffold00136 63301 29 ............................. GGTGAAATGAAGGAATCGAAAAAGAGAAA scaffold12973 Both SNP 0035.scaffold00136 63367 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 63438 1 A T scaffold12973 Both SNP 0035.scaffold00136 63448 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 63498 1 A T scaffold12973 ScafM SNP 0035.scaffold00136 63500 1 G A scaffold12973 ScafM SNP 0035.scaffold00136 63515 1 A T scaffold12973 ScafM SNP 0035.scaffold00136 63520 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 63547 2 GT AG scaffold12973 ScafM SNP 0035.scaffold00136 63558 1 T C scaffold12973 ScafM INDEL 0035.scaffold00136 63583 4 AATT .... scaffold12973 ScafM SNP 0035.scaffold00136 63590 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 63596 1 C A scaffold12973 ScafM INDEL 0035.scaffold00136 63603 4 .... ATAT scaffold12973 ScafM SNP 0035.scaffold00136 63641 1 A G scaffold12973 ScafM INDEL 0035.scaffold00136 63797 5 ATTCA ..... scaffold12973 ScafM SNP 0035.scaffold00136 63821 1 C T scaffold12973 Both SNP 0035.scaffold00136 63925 1 G A scaffold12973 Both SNP 0035.scaffold00136 63969 1 C G scaffold12973 Both SNP 0035.scaffold00136 64051 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 64088 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 64098 1 T C scaffold12973 Both SNP 0035.scaffold00136 64162 1 C A scaffold12973 Both SNP 0035.scaffold00136 64241 1 T C scaffold12973 ReadM SNP 0035.scaffold00136 64305 1 T G - ReadM SNP 0035.scaffold00136 64483 1 C T - Both INDEL 0035.scaffold00136 64547 1 A . scaffold12973 Both SNP 0035.scaffold00136 64569 1 A T scaffold12973 Both SNP 0035.scaffold00136 64743 1 T C scaffold12973 Both SNP 0035.scaffold00136 64801 1 A C scaffold12973 Both SNP 0035.scaffold00136 64817 1 A C scaffold12973 Both SNP 0035.scaffold00136 64840 1 G A scaffold12973 Both INDEL 0035.scaffold00136 65125 1 . C scaffold12973 Both SNP 0035.scaffold00136 65260 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 65656 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 65659 1 A C scaffold12973 ScafM SNP 0035.scaffold00136 65663 1 C G scaffold12973 ScafM SNP 0035.scaffold00136 65745 1 A G scaffold12973 ReadM SNP 0035.scaffold00136 66385 1 C T - ReadM SNP 0035.scaffold00136 66662 1 C T - ReadM SNP 0035.scaffold00136 66751 1 A G - ReadM SNP 0035.scaffold00136 67115 1 G A - ReadM SNP 0035.scaffold00136 67122 1 C T - ReadM SNP 0035.scaffold00136 67372 1 C T - ReadM SNP 0035.scaffold00136 67497 1 G A - ReadM SNP 0035.scaffold00136 67675 1 A G - ReadM SNP 0035.scaffold00136 67698 1 G A - ReadM SNP 0035.scaffold00136 67826 1 A G - ReadM SNP 0035.scaffold00136 68122 1 G C - ReadM SNP 0035.scaffold00136 68299 1 G A - ReadM SNP 0035.scaffold00136 68334 1 G A - ReadM SNP 0035.scaffold00136 68358 1 T A - ReadM SNP 0035.scaffold00136 68501 1 T G - ReadM SNP 0035.scaffold00136 68614 1 T C - ReadM SNP 0035.scaffold00136 68638 1 T C - ReadM SNP 0035.scaffold00136 68717 1 C T - ReadM SNP 0035.scaffold00136 68803 1 G C - ReadM SNP 0035.scaffold00136 68819 1 A G - ReadM SNP 0035.scaffold00136 68924 1 T G - ReadM SNP 0035.scaffold00136 69269 1 A G - ReadM INDEL 0035.scaffold00136 69317 1 . A - ReadM SNP 0035.scaffold00136 69388 1 G C - ReadM SNP 0035.scaffold00136 69413 1 A G - ReadM SNP 0035.scaffold00136 69564 1 G A - ReadM SNP 0035.scaffold00136 69576 1 G A - ReadM SNP 0035.scaffold00136 69638 1 A C - ReadM SNP 0035.scaffold00136 69644 1 A G - ReadM SNP 0035.scaffold00136 69729 1 T A - ReadM SNP 0035.scaffold00136 69762 1 A G - ReadM SNP 0035.scaffold00136 69793 1 G A - ReadM SNP 0035.scaffold00136 69933 1 A G - Both INDEL 0035.scaffold00136 70201 1 . C scaffold12973 Both SNP 0035.scaffold00136 70320 1 G T scaffold12973 Both SNP 0035.scaffold00136 70522 1 A G scaffold12973 Both SNP 0035.scaffold00136 70662 1 T G scaffold12973 Both SNP 0035.scaffold00136 70699 1 T C scaffold12973 Both SNP 0035.scaffold00136 70734 1 C A scaffold12973 Both SNP 0035.scaffold00136 70838 1 T G scaffold12973 Both SNP 0035.scaffold00136 70921 1 C A scaffold12973 ScafM SNP 0035.scaffold00136 71045 1 C A scaffold12973 Both INDEL 0035.scaffold00136 71082 1 T . scaffold12973 Both SNP 0035.scaffold00136 71116 1 C A scaffold12973 Both SNP 0035.scaffold00136 71192 1 T C scaffold12973 ScafM SNP 0035.scaffold00136 71221 1 C T scaffold12973 ScafM SNP 0035.scaffold00136 71224 1 A G scaffold12973 ScafM SNP 0035.scaffold00136 71226 1 G A scaffold12973 ReadM SNP 0035.scaffold00136 71340 1 T C - ReadM SNP 0035.scaffold00136 71346 1 C T - ScafM SNP 0035.scaffold00136 71486 1 T C scaffold24518 Both SNP 0035.scaffold00136 71535 1 T C scaffold24518 ScafM SNP 0035.scaffold00136 71676 1 T C scaffold24518 ReadM SNP 0035.scaffold00136 71686 1 G A - ScafM SNP 0035.scaffold00136 71699 1 T A scaffold24518 ScafM SNP 0035.scaffold00136 71702 1 G A scaffold24518 ScafM SNP 0035.scaffold00136 71712 1 C A scaffold24518 ScafM SNP 0035.scaffold00136 71735 1 G A scaffold24518 ReadM SNP 0035.scaffold00136 71739 1 C T - ScafM SNP 0035.scaffold00136 71749 1 C T scaffold24518 ScafM SNP 0035.scaffold00136 71752 1 C G scaffold24518 ScafM INDEL 0035.scaffold00136 71807 8 ........ CGGACAAG scaffold24518 ScafM INDEL 0035.scaffold00136 71809 5 ..... GCCCG scaffold24518 ScafM INDEL 0035.scaffold00136 71848 2 AA .. scaffold24518 ScafM INDEL 0035.scaffold00136 71851 1 A . scaffold24518 ScafM INDEL 0035.scaffold00136 71854 8 GGAAAAAT ........ scaffold24518 ScafM INDEL 0035.scaffold00136 71863 5 ATTAG ..... scaffold24518 ReadM SNP 0035.scaffold00136 71872 1 T G - ScafM SNP 0035.scaffold00136 71942 1 C T scaffold24518 ScafM SNP 0035.scaffold00136 71964 1 G A scaffold24518 ScafM SNP 0035.scaffold00136 71980 1 A G scaffold24518 ScafM SNP 0035.scaffold00136 71991 1 A G scaffold24518 ScafM SNP 0035.scaffold00136 72013 1 T C scaffold24518 ScafM INDEL 0035.scaffold00136 72064 6 ...... ACTATT scaffold24518 ScafM INDEL 0035.scaffold00136 72066 3 ... GTT scaffold24518 ScafM SNP 0035.scaffold00136 72092 1 T C scaffold24518 ScafM SNP 0035.scaffold00136 72101 1 A T scaffold24518 ScafM SNP 0035.scaffold00136 72131 1 A T scaffold24518 ScafM SNP 0035.scaffold00136 72154 1 T G scaffold24518 ScafM SNP 0035.scaffold00136 72175 1 T C scaffold24518 ScafM SNP 0035.scaffold00136 72198 1 C T scaffold24518 ScafM SNP 0035.scaffold00136 72202 1 C A scaffold24518 ScafM INDEL 0035.scaffold00136 72213 1 A . scaffold24518 ScafM SNP 0035.scaffold00136 72244 1 A T scaffold24518 ScafM SNP 0035.scaffold00136 72269 1 C A scaffold24518 ScafM INDEL 0035.scaffold00136 72276 1 . A scaffold24518 ScafM SNP 0035.scaffold00136 72290 1 C A scaffold24518 ReadM SNP 0035.scaffold00136 72826 1 T C - ReadM SNP 0035.scaffold00136 72944 1 T C - ReadM SNP 0035.scaffold00136 73186 1 C T - Both SNP 0035.scaffold00136 73383 1 G A scaffold22066 ScafM SNP 0035.scaffold00136 73661 1 C A scaffold22066 ScafM SNP 0035.scaffold00136 73665 1 C T scaffold22066 Both INDEL 0035.scaffold00136 73678 1 T . scaffold22066 ScafM SNP 0035.scaffold00136 73691 1 T C scaffold22066 ReadM SNP 0035.scaffold00136 73829 1 T C - ReadM SNP 0035.scaffold00136 73846 1 A C - ReadM SNP 0035.scaffold00136 73858 1 A G - Both SNP 0035.scaffold00136 73934 1 C A scaffold22066 Both SNP 0035.scaffold00136 73948 1 G A scaffold22066 Both SNP 0035.scaffold00136 73966 1 G A scaffold22066 ScafM SNP 0035.scaffold00136 74000 1 G A scaffold22066 ScafM SNP 0035.scaffold00136 74003 1 C T scaffold22066 Both SNP 0035.scaffold00136 74017 1 A C scaffold22066 Both SNP 0035.scaffold00136 74064 1 A C scaffold22066 Both SNP 0035.scaffold00136 74306 1 A G scaffold22066 Both SNP 0035.scaffold00136 74541 1 G A scaffold22066 Both SNP 0035.scaffold00136 74551 1 G A scaffold22066 Both SNP 0035.scaffold00136 74585 1 C A scaffold22066 Both INDEL 0035.scaffold00136 74785 1 C . scaffold22066 Both SNP 0035.scaffold00136 74828 1 C T scaffold22066 ScafM SNP 0035.scaffold00136 74859 2 AC CA scaffold22066 Both SNP 0035.scaffold00136 74880 1 C G scaffold22066 Both SNP 0035.scaffold00136 74917 1 C T scaffold22066 Both SNP 0035.scaffold00136 74978 1 G C scaffold22066 Both SNP 0035.scaffold00136 74994 1 C T scaffold22066 Both SNP 0035.scaffold00136 75073 1 A T scaffold22066 Both SNP 0035.scaffold00136 75101 1 C T scaffold22066 ReadM SNP 0035.scaffold00136 75438 1 T C - ReadM SNP 0035.scaffold00136 75689 1 A G - ReadM SNP 0035.scaffold00136 75733 1 A G - ReadM SNP 0035.scaffold00136 76008 1 C A - ScafM SNP 0035.scaffold00136 76269 1 T C scaffold22066 ScafM INDEL 0035.scaffold00136 76528 1 G . scaffold22066 ScafM SNP 0035.scaffold00136 76539 1 C T scaffold22066 ScafM SNP 0035.scaffold00136 76543 1 T A scaffold22066 ScafM INDEL 0035.scaffold00136 76548 1 . A scaffold22066 ScafM SNP 0035.scaffold00136 76867 1 C T scaffold22066 ScafM INDEL 0035.scaffold00136 76902 1 . T scaffold22066 ScafM INDEL 0035.scaffold00136 76945 1 . T scaffold22066 ScafM SNP 0035.scaffold00136 76972 2 TG CA scaffold22066 ScafM INDEL 0035.scaffold00136 76996 26 TTGATTATTGTTGTAAGTATATATGC .......................... scaffold22066 ScafM SNP 0035.scaffold00136 77137 1 T C scaffold22066 ScafM SNP 0035.scaffold00136 77139 1 G T scaffold22066 Both SNP 0035.scaffold00136 77255 1 G A scaffold22066 Both SNP 0035.scaffold00136 77332 1 A G scaffold22066 ReadM SNP 0035.scaffold00136 77379 1 G A - ReadM SNP 0035.scaffold00136 77383 1 A G - ReadM SNP 0035.scaffold00136 77605 1 C T - ReadM SNP 0035.scaffold00136 77609 1 A G - ScafM SNP 0035.scaffold00136 77650 1 C T scaffold22066 ScafM SNP 0035.scaffold00136 77659 1 C G scaffold22066 ScafM SNP 0035.scaffold00136 77662 1 C A scaffold22066 Both SNP 0035.scaffold00136 77681 1 G A scaffold22066 Both SNP 0035.scaffold00136 77880 1 T C scaffold22066 Both SNP 0035.scaffold00136 78074 1 T A scaffold22066 Both SNP 0035.scaffold00136 78098 1 A G scaffold22066 Both SNP 0035.scaffold00136 78124 1 T C scaffold22066 Both SNP 0035.scaffold00136 78316 1 A G scaffold22066 Both SNP 0035.scaffold00136 78346 1 G T scaffold22066 Both SNP 0035.scaffold00136 78374 1 G A scaffold22066 Both SNP 0035.scaffold00136 78383 1 T C scaffold22066 ReadM INDEL 0035.scaffold00136 78455 1 T . - ReadM SNP 0035.scaffold00136 78549 1 T C - ScafM SNP 0035.scaffold00136 78645 2 CC TA scaffold22066 ScafM SNP 0035.scaffold00136 78668 1 A T scaffold22066 ScafM SNP 0035.scaffold00136 78680 1 C T scaffold22066 Both INDEL 0035.scaffold00136 78691 1 T . scaffold22066 Both SNP 0035.scaffold00136 78758 1 T G scaffold22066 ScafM INDEL 0035.scaffold00136 78826 2 TT .. scaffold22066 ReadM SNP 0035.scaffold00136 78923 1 G A - ReadM SNP 0035.scaffold00136 78931 1 T A - ReadM SNP 0035.scaffold00136 78946 1 G A - ReadM SNP 0035.scaffold00136 79431 1 C T - ReadM SNP 0035.scaffold00136 79647 1 C T - ReadM SNP 0035.scaffold00136 79792 1 G A - ReadM SNP 0035.scaffold00136 79926 1 G A - ReadM SNP 0035.scaffold00136 79939 1 T A - ReadM INDEL 0035.scaffold00136 80231 1 G . - ScafM INDEL 0035.scaffold00136 80231 2 GC .T scaffold22066 Both SNP 0035.scaffold00136 80245 1 G A scaffold22066 ReadM SNP 0035.scaffold00136 80378 1 G A - ReadM SNP 0035.scaffold00136 80389 1 C T - ReadM SNP 0035.scaffold00136 80397 1 T C - ReadM SNP 0035.scaffold00136 80419 1 A G - ReadM SNP 0035.scaffold00136 80493 1 G A - ReadM SNP 0035.scaffold00136 80613 1 G A - ReadM SNP 0035.scaffold00136 80782 1 C T - ReadM INDEL 0035.scaffold00136 80797 1 . T - ReadM SNP 0035.scaffold00136 80817 1 T C - ReadM SNP 0035.scaffold00136 80868 1 T C - ReadM SNP 0035.scaffold00136 80919 1 G A - ReadM SNP 0035.scaffold00136 80922 1 G A - ReadM SNP 0035.scaffold00136 80961 1 A G - ReadM SNP 0035.scaffold00136 81072 1 C A - ReadM INDEL 0035.scaffold00136 81367 1 T . - ReadM SNP 0035.scaffold00136 81403 1 G A - ReadM SNP 0035.scaffold00136 81569 1 C T - ReadM SNP 0035.scaffold00136 81713 1 C A - ReadM SNP 0035.scaffold00136 81730 1 T A - ReadM SNP 0035.scaffold00136 86532 1 G A - ReadM SNP 0035.scaffold00136 87287 1 G A - ReadM SNP 0035.scaffold00136 87428 1 C T - ReadM SNP 0035.scaffold00136 87437 1 T G - ReadM SNP 0035.scaffold00136 87626 1 G T - ReadM SNP 0035.scaffold00136 89091 1 A G - ReadM SNP 0035.scaffold00136 89196 1 T C - ReadM SNP 0035.scaffold00136 90972 1 T C - ReadM SNP 0035.scaffold00136 90976 1 G A - ReadM INDEL 0035.scaffold00136 91011 1 . T - ScafM SNP 0035.scaffold00136 91282 1 C T scaffold44392 Both INDEL 0035.scaffold00136 91284 1 A . scaffold44392 Both SNP 0035.scaffold00136 91347 1 G A scaffold44392 Both SNP 0035.scaffold00136 91375 1 A G scaffold44392 ScafM INDEL 0035.scaffold00136 91377 1 . A scaffold44392 ReadM SNP 0035.scaffold00136 91569 1 T C - ScafM SNP 0035.scaffold00136 92277 1 C G scaffold44392 ScafM INDEL 0035.scaffold00136 92323 6 ATTGGA ...... scaffold44392 ScafM SNP 0035.scaffold00136 92676 1 T C scaffold44392 Both INDEL 0035.scaffold00136 92724 1 . G scaffold44392 ScafM SNP 0035.scaffold00136 94057 1 A G scaffold21960 ScafM INDEL 0035.scaffold00136 94061 5 TAGTT ..... scaffold21960 ScafM SNP 0035.scaffold00136 94069 2 AG CT scaffold21960 ReadM SNP 0035.scaffold00136 94281 1 G A - Both SNP 0035.scaffold00136 94456 1 T G scaffold21960 ScafM SNP 0035.scaffold00136 94476 1 A G scaffold21960 Both SNP 0035.scaffold00136 94624 1 G C scaffold21960 Both SNP 0035.scaffold00136 94735 1 A G scaffold21960 Both SNP 0035.scaffold00136 94936 1 T C scaffold21960 Both SNP 0035.scaffold00136 94979 1 T A scaffold21960 Both SNP 0035.scaffold00136 95010 1 T A scaffold21960 ScafM SNP 0035.scaffold00136 95271 1 C T scaffold21960 ScafM INDEL 0035.scaffold00136 95282 1 . T scaffold21960 ScafM INDEL 0035.scaffold00136 95285 1 G . scaffold21960 ScafM INDEL 0035.scaffold00136 95289 2 TG .. scaffold21960 ScafM SNP 0035.scaffold00136 95292 1 G T scaffold21960 ScafM SNP 0035.scaffold00136 95295 1 A T scaffold21960 ScafM SNP 0035.scaffold00136 95297 1 A C scaffold21960 ScafM SNP 0035.scaffold00136 95299 1 T C scaffold21960 ScafM INDEL 0035.scaffold00136 95300 2 .A TG scaffold21960 ScafM INDEL 0035.scaffold00136 95304 3 ... GTG scaffold21960 Both SNP 0035.scaffold00136 95338 1 T C scaffold21960 Both SNP 0035.scaffold00136 95433 1 G C scaffold21960 Both SNP 0035.scaffold00136 95642 1 G A scaffold21960 Both SNP 0035.scaffold00136 95815 1 T A scaffold21960 Both SNP 0035.scaffold00136 95880 1 A G scaffold21960 ScafM SNP 0035.scaffold00136 95960 1 G A scaffold21960 Both SNP 0035.scaffold00136 96034 1 T G scaffold21960 ScafM SNP 0035.scaffold00136 96256 1 C G scaffold21960 ScafM INDEL 0035.scaffold00136 96268 4 .... CATC scaffold21960 Both SNP 0035.scaffold00136 96317 1 A T scaffold21960 Both SNP 0035.scaffold00136 96482 1 C T scaffold21960 Both SNP 0035.scaffold00136 96596 1 C A scaffold21960 Both SNP 0035.scaffold00136 96693 1 T A scaffold21960 Both SNP 0035.scaffold00136 97060 1 A T scaffold21960 Both SNP 0035.scaffold00136 97145 1 T C scaffold21960 Both SNP 0035.scaffold00136 97213 1 T G scaffold21960 Both SNP 0035.scaffold00136 97297 1 T G scaffold21960 Both SNP 0035.scaffold00136 97508 1 T C scaffold21960 Both SNP 0035.scaffold00136 97756 1 G A scaffold21960 ScafM SNP 0035.scaffold00136 98332 1 G T scaffold21960 Both SNP 0035.scaffold00136 98425 1 T A scaffold21960 ScafM INDEL 0035.scaffold00136 98530 18 .................. TCCCTGGTGTAAGTTCAA scaffold21960 ScafM INDEL 0035.scaffold00136 98759 1 C . scaffold21960 Both SNP 0035.scaffold00136 98960 1 G A scaffold21960 Both SNP 0035.scaffold00136 98984 1 G A scaffold21960 ScafM INDEL 0035.scaffold00136 99079 21 ..................... TCCTTCATTTCAGATAGTGTC scaffold21960 ReadM SNP 0035.scaffold00136 99080 1 C T - ReadM SNP 0035.scaffold00136 99645 1 A T - ReadM SNP 0035.scaffold00136 99841 1 T C - ReadM SNP 0035.scaffold00136 100029 1 T G - ReadM SNP 0035.scaffold00136 100093 1 T A - Both SNP 0035.scaffold00136 100327 1 T A scaffold21960 ScafM SNP 0035.scaffold00136 100392 1 C T scaffold21960 ScafM SNP 0035.scaffold00136 100400 1 T A scaffold21960 Both SNP 0035.scaffold00136 100466 1 T C scaffold21960 ScafM INDEL 0035.scaffold00136 100965 1 C . scaffold21960 ScafM SNP 0035.scaffold00136 100988 3 GCG TTT scaffold21960 ScafM SNP 0035.scaffold00136 100992 2 AA TT scaffold21960 ScafM SNP 0035.scaffold00136 100995 2 AG TT scaffold21960 ScafM SNP 0035.scaffold00136 101000 3 CGC TTT scaffold21960 ScafM SNP 0035.scaffold00136 101342 1 T C scaffold21960 Both SNP 0035.scaffold00136 101435 1 T C scaffold21960 ScafM INDEL 0035.scaffold00136 101511 1 T . scaffold21960 Both SNP 0035.scaffold00136 101655 1 T G scaffold21960 Both SNP 0035.scaffold00136 102184 1 G A scaffold21960 Both SNP 0035.scaffold00136 102328 1 G C scaffold21960 ScafM INDEL 0035.scaffold00136 102435 25 ......................... TGCTGTGTTTACTGAAGGCTTAGAT scaffold21960 ScafM INDEL 0035.scaffold00136 102457 75 ........................................................................... AATTTATTAAACCAAGCCTTAGCAAAAAAGCTAGTTTGTTCGAGCTGTGAAGTGCTGTGTTTACTGAAGGCTTAG scaffold21960 ScafM SNP 0035.scaffold00136 102695 1 G A scaffold21960 Both INDEL 0035.scaffold00136 102711 2 AT .. scaffold21960 ScafM SNP 0035.scaffold00136 102946 1 C T scaffold21960 ScafM SNP 0035.scaffold00136 103017 1 A G scaffold21960 ScafM SNP 0035.scaffold00136 103090 1 A T scaffold21960 Both SNP 0035.scaffold00136 103120 1 C A scaffold21960 Both SNP 0035.scaffold00136 103240 1 G T scaffold21960 ScafM INDEL 0035.scaffold00136 103370 7 ....... ATCTAAT scaffold21960 Both INDEL 0035.scaffold00136 103766 1 T . scaffold21960 Both SNP 0035.scaffold00136 103895 1 C T scaffold21960 Both SNP 0035.scaffold00136 103948 1 G A scaffold21960 ReadM SNP 0035.scaffold00136 104183 1 A C - ScafM SNP 0035.scaffold00136 104205 1 T G scaffold21960 ScafM SNP 0035.scaffold00136 104207 2 TT GG scaffold21960 ScafM SNP 0035.scaffold00136 104674 1 C G scaffold21960 ScafM SNP 0035.scaffold00136 104681 1 C T scaffold21960 ReadM SNP 0035.scaffold00136 105346 1 G A - ReadM SNP 0035.scaffold00136 105390 1 A G - ReadM INDEL 0035.scaffold00136 105575 1 . A - ReadM SNP 0035.scaffold00136 105783 1 A G - ReadM SNP 0035.scaffold00136 105839 1 A T - ScafM INDEL 0035.scaffold00136 106205 1 C . scaffold46592 ScafM SNP 0035.scaffold00136 106477 1 T C scaffold46592 ScafM SNP 0035.scaffold00136 106530 1 A T scaffold46592 ScafM SNP 0035.scaffold00136 106595 1 A G scaffold46592 ScafM INDEL 0035.scaffold00136 106631 10 .......... GTGGGGGGGG scaffold46592 ScafM SNP 0035.scaffold00136 106635 1 A G scaffold46592 ScafM SNP 0035.scaffold00136 107212 1 A G scaffold1956 ScafM INDEL 0035.scaffold00136 107215 1 . C scaffold1956 ScafM SNP 0035.scaffold00136 107217 1 T G scaffold1956 ScafM SNP 0035.scaffold00136 107227 1 T C scaffold1956 ScafM SNP 0035.scaffold00136 107231 1 A C scaffold1956 ScafM INDEL 0035.scaffold00136 107234 2 GT .. scaffold1956 ScafM SNP 0035.scaffold00136 107240 1 G T scaffold1956 ScafM SNP 0035.scaffold00136 107273 1 C T scaffold1956 ScafM INDEL 0035.scaffold00136 107281 1 G . scaffold1956 ScafM SNP 0035.scaffold00136 107286 1 T G scaffold1956 ScafM SNP 0035.scaffold00136 107291 1 G A scaffold1956 ScafM SNP 0035.scaffold00136 107296 1 A G scaffold1956 ScafM SNP 0035.scaffold00136 107300 1 C T scaffold1956 ScafM SNP 0035.scaffold00136 107305 1 A G scaffold1956 ScafM SNP 0035.scaffold00136 107322 1 C T scaffold1956 ScafM INDEL 0035.scaffold00136 107325 1 . A scaffold1956 ScafM SNP 0035.scaffold00136 107341 1 C T scaffold1956 ScafM SNP 0035.scaffold00136 107351 2 AG CA scaffold1956 ScafM SNP 0035.scaffold00136 107371 1 A G scaffold1956 ScafM SNP 0035.scaffold00136 107388 1 G C scaffold1956 ScafM SNP 0035.scaffold00136 107412 1 A T scaffold1956 ScafM SNP 0035.scaffold00136 107480 1 G A scaffold1956 ScafM INDEL 0035.scaffold00136 108123 1 . A scaffold48007 ScafM SNP 0035.scaffold00136 108142 1 G C scaffold48007 ScafM SNP 0035.scaffold00136 108180 1 G A scaffold48007 ScafM INDEL 0035.scaffold00136 108182 4 AGCA .TTT scaffold48007 ScafM SNP 0035.scaffold00136 108259 1 T C scaffold48007 ScafM SNP 0035.scaffold00136 108345 1 G A scaffold48007 ScafM INDEL 0035.scaffold00136 108454 10 .......... GATTTTTGTT scaffold48007 ScafM INDEL 0035.scaffold00136 108504 3 GAA ... scaffold48007 Both SNP 0035.scaffold00136 108519 1 G A scaffold48007 Both SNP 0035.scaffold00136 108774 1 T C scaffold48007 ScafM INDEL 0035.scaffold00136 108824 71 AAGAAGTACATAGTAAACCACAATTAGACAAGCATTTAGGCCAATCACCAATGTCACTAGATATTATTTAA ....................................................................... scaffold48007 ScafM INDEL 0035.scaffold00136 108896 1 A . scaffold48007 ReadM SNP 0035.scaffold00136 108916 1 A G - ReadM SNP 0035.scaffold00136 109922 1 C G - ReadM SNP 0035.scaffold00136 109970 1 T C - ReadM SNP 0035.scaffold00136 110019 1 C T - Both SNP 0035.scaffold00136 110389 1 G T C19717771 Both INDEL 0035.scaffold00136 110442 1 . A C19717771 ScafM SNP 0035.scaffold00136 110445 1 T A C19717771 Both SNP 0035.scaffold00136 110569 1 C G C19717771 Both INDEL 0035.scaffold00136 110744 2 .. GC C19717771 Both SNP 0035.scaffold00136 110807 1 G A C19717771 Both SNP 0035.scaffold00136 110922 1 T A C19717771 Both SNP 0035.scaffold00136 111426 1 T G C19717771 Both SNP 0035.scaffold00136 111684 1 T C C19717771 Both SNP 0035.scaffold00136 111716 1 G T C19717771 ReadM SNP 0035.scaffold00136 111824 1 A T - ScafM SNP 0035.scaffold00136 111980 1 T G scaffold12740 Both SNP 0035.scaffold00136 112004 1 G A scaffold12740 ScafM INDEL 0035.scaffold00136 112085 3 ... TGT scaffold12740 ScafM SNP 0035.scaffold00136 112110 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 112114 1 G C scaffold12740 ScafM SNP 0035.scaffold00136 112126 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 112150 1 C G scaffold12740 Both SNP 0035.scaffold00136 112376 1 C T scaffold12740 Both SNP 0035.scaffold00136 112391 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 112459 1 C G scaffold12740 ScafM SNP 0035.scaffold00136 112593 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 113004 1 T C scaffold12740 Both INDEL 0035.scaffold00136 113062 2 GT .. scaffold12740 ScafM SNP 0035.scaffold00136 113081 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 113085 1 G A scaffold12740 ScafM INDEL 0035.scaffold00136 113087 2 .. GT scaffold12740 ScafM SNP 0035.scaffold00136 113238 1 A G scaffold12740 ScafM INDEL 0035.scaffold00136 113270 12 TTTACTTGTATA ............ scaffold12740 ScafM INDEL 0035.scaffold00136 113284 16 AAGAAATAAAGTATTG ................ scaffold12740 ScafM INDEL 0035.scaffold00136 113302 3 TTG ... scaffold12740 ScafM INDEL 0035.scaffold00136 113309 25 GTGTGTAAGCAGGATTTGTTGCATG ......................... scaffold12740 ScafM INDEL 0035.scaffold00136 113335 2 AC .. scaffold12740 ScafM INDEL 0035.scaffold00136 113391 10 GAACAGGCCC .......... scaffold12740 ScafM SNP 0035.scaffold00136 113425 1 T C scaffold12740 ScafM INDEL 0035.scaffold00136 113446 1 T . scaffold12740 ScafM INDEL 0035.scaffold00136 113464 4 .... AATT scaffold12740 ScafM SNP 0035.scaffold00136 113534 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 113540 1 G T scaffold12740 ScafM SNP 0035.scaffold00136 113546 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 113567 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 113576 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 113585 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 113608 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 113613 1 G T scaffold12740 ScafM SNP 0035.scaffold00136 113670 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 113674 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 113679 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 113688 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 113701 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 113706 1 C G scaffold12740 ScafM INDEL 0035.scaffold00136 113721 13 TTAATACAAACAA ............. scaffold12740 ScafM INDEL 0035.scaffold00136 113736 1 T . scaffold12740 ScafM SNP 0035.scaffold00136 113745 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 113769 1 C T scaffold12740 ScafM INDEL 0035.scaffold00136 113782 1 . A scaffold12740 ScafM SNP 0035.scaffold00136 113792 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 113799 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 113806 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 114619 2 CC GT scaffold12740 ScafM SNP 0035.scaffold00136 114662 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 114671 1 G A scaffold12740 ScafM INDEL 0035.scaffold00136 114685 5 TAGAA ..... scaffold12740 ScafM SNP 0035.scaffold00136 114691 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 114702 1 C T scaffold12740 ScafM INDEL 0035.scaffold00136 114709 1 . G scaffold12740 ScafM INDEL 0035.scaffold00136 114710 1 . G scaffold12740 ScafM INDEL 0035.scaffold00136 114744 1 . A scaffold12740 ScafM INDEL 0035.scaffold00136 114750 1 . T scaffold12740 ScafM SNP 0035.scaffold00136 114756 2 GA AT scaffold12740 ScafM INDEL 0035.scaffold00136 114764 1 . T scaffold12740 ScafM SNP 0035.scaffold00136 114766 2 GG TA scaffold12740 ScafM SNP 0035.scaffold00136 114788 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 114801 1 T C scaffold12740 ScafM INDEL 0035.scaffold00136 114814 30 TGAGGAGAAAGAGAGTGTTTAGGAGATGAG .............................. scaffold12740 ScafM INDEL 0035.scaffold00136 114882 18 ATTCCAAATGACATTATA .................. scaffold12740 ScafM SNP 0035.scaffold00136 114932 1 C G scaffold12740 ScafM SNP 0035.scaffold00136 114939 1 G C scaffold12740 ScafM SNP 0035.scaffold00136 114953 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 114960 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 114992 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 115035 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 115083 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 115652 1 G T scaffold12740 ScafM INDEL 0035.scaffold00136 115658 2 .. CT scaffold12740 ScafM INDEL 0035.scaffold00136 115659 1 . T scaffold12740 ScafM SNP 0035.scaffold00136 115681 1 G C scaffold12740 ScafM INDEL 0035.scaffold00136 115701 2 .. AA scaffold12740 ScafM SNP 0035.scaffold00136 115705 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 115709 1 G T scaffold12740 ScafM INDEL 0035.scaffold00136 115712 26 .......................... TACAATATTATTATATTAAATATTCT scaffold12740 ScafM INDEL 0035.scaffold00136 115715 12 ............ ATATTTCTCTAG scaffold12740 ScafM SNP 0035.scaffold00136 115763 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 115791 1 T G scaffold12740 ScafM SNP 0035.scaffold00136 115861 1 T C scaffold12740 ScafM INDEL 0035.scaffold00136 115911 4 TCAT .... scaffold12740 ScafM INDEL 0035.scaffold00136 115918 13 CCTCATCACCCAT ...........GG scaffold12740 ScafM SNP 0035.scaffold00136 115940 1 G T scaffold12740 ScafM SNP 0035.scaffold00136 115948 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 115953 1 G T scaffold12740 ScafM SNP 0035.scaffold00136 115959 1 C A scaffold12740 ScafM SNP 0035.scaffold00136 115968 1 G C scaffold12740 ScafM SNP 0035.scaffold00136 115977 2 TC CT scaffold12740 ScafM SNP 0035.scaffold00136 115980 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 115989 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 115999 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 116001 2 AC GT scaffold12740 ScafM SNP 0035.scaffold00136 116010 1 G C scaffold12740 ScafM SNP 0035.scaffold00136 116018 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 116030 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 116055 1 T A scaffold12740 ScafM SNP 0035.scaffold00136 116062 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 116067 1 C A scaffold12740 ScafM SNP 0035.scaffold00136 116076 2 GG AA scaffold12740 ScafM SNP 0035.scaffold00136 116087 1 C A scaffold12740 ReadM SNP 0035.scaffold00136 118631 1 T C - ReadM SNP 0035.scaffold00136 118764 1 C T - ReadM SNP 0035.scaffold00136 119293 1 G T - ScafM SNP 0035.scaffold00136 120113 2 AA TT scaffold54185 ReadM SNP 0035.scaffold00136 120845 1 T C - ReadM SNP 0035.scaffold00136 121234 1 C T - ReadM SNP 0035.scaffold00136 121791 1 T C - ReadM SNP 0035.scaffold00136 121836 1 G A - ReadM SNP 0035.scaffold00136 121998 1 T G - ReadM SNP 0035.scaffold00136 122389 1 A G - ReadM SNP 0035.scaffold00136 124531 1 T A - ReadM SNP 0035.scaffold00136 124536 1 A G - ReadM SNP 0035.scaffold00136 124614 1 T A - ReadM SNP 0035.scaffold00136 124763 1 C T - ReadM SNP 0035.scaffold00136 124871 1 A G - ReadM SNP 0035.scaffold00136 125290 1 A T - ScafM SNP 0035.scaffold00136 128085 1 G A scaffold54185 ScafM INDEL 0035.scaffold00136 128139 18 .................. CCAATCCCAATCCCAATC scaffold54185 ScafM SNP 0035.scaffold00136 128334 1 T A scaffold54185 ScafM INDEL 0035.scaffold00136 128445 4 .... GAGA scaffold54185 ScafM SNP 0035.scaffold00136 128565 1 T C scaffold54185 ScafM SNP 0035.scaffold00136 128717 1 C T scaffold54185 ScafM SNP 0035.scaffold00136 128912 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 128916 1 G A scaffold12740 ScafM INDEL 0035.scaffold00136 128950 1 C . scaffold12740 ScafM INDEL 0035.scaffold00136 128952 1 C . scaffold12740 ScafM SNP 0035.scaffold00136 128989 2 AT TG scaffold12740 ScafM SNP 0035.scaffold00136 129009 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 129013 1 C T scaffold12740 ScafM SNP 0035.scaffold00136 129028 1 C T scaffold12740 ScafM INDEL 0035.scaffold00136 129160 6 AAACCC ...... scaffold12740 ScafM SNP 0035.scaffold00136 129197 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 129205 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 129256 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 129278 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 129295 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 129300 1 A T scaffold12740 ScafM SNP 0035.scaffold00136 129303 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 129356 1 G T scaffold12740 ScafM SNP 0035.scaffold00136 129368 1 G A scaffold12740 ScafM SNP 0035.scaffold00136 129378 1 C A scaffold12740 ScafM SNP 0035.scaffold00136 129426 1 G C scaffold12740 Both SNP 0035.scaffold00136 129469 1 T G scaffold12740 ScafM SNP 0035.scaffold00136 129558 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 129560 1 G A scaffold12740 Both SNP 0035.scaffold00136 129582 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 129608 1 A C scaffold12740 ScafM SNP 0035.scaffold00136 130267 1 C G scaffold12740 ScafM SNP 0035.scaffold00136 130373 1 A G scaffold12740 ScafM INDEL 0035.scaffold00136 130383 1 A . scaffold12740 ScafM SNP 0035.scaffold00136 130390 1 A T scaffold12740 ReadM SNP 0035.scaffold00136 133190 1 A G - ReadM SNP 0035.scaffold00136 133669 1 G T - ReadM SNP 0035.scaffold00136 133766 1 G A - ScafM INDEL 0035.scaffold00136 134392 1 T . scaffold12740 ScafM SNP 0035.scaffold00136 134394 1 T G scaffold12740 ScafM SNP 0035.scaffold00136 134396 1 T A scaffold12740 ScafM SNP 0035.scaffold00136 134557 1 A G scaffold12740 ScafM SNP 0035.scaffold00136 134601 1 A G scaffold12740 ReadM SNP 0035.scaffold00136 134702 1 G C - ReadM SNP 0035.scaffold00136 134736 1 A G - ReadM INDEL 0035.scaffold00136 134828 3 ... TCC - Both SNP 0035.scaffold00136 134896 1 C A scaffold12740 Both SNP 0035.scaffold00136 134928 1 G A scaffold12740 ReadM SNP 0035.scaffold00136 134979 1 G T - Both SNP 0035.scaffold00136 135001 1 T C scaffold12740 Both SNP 0035.scaffold00136 135022 1 C A scaffold12740 ReadM INDEL 0035.scaffold00136 135148 1 C . - ScafM INDEL 0035.scaffold00136 135148 2 CG .A scaffold12740 Both INDEL 0035.scaffold00136 135210 1 . G scaffold12740 Both SNP 0035.scaffold00136 135254 1 A G scaffold12740 ReadM SNP 0035.scaffold00136 135378 1 G C - ReadM SNP 0035.scaffold00136 135534 1 C G - ReadM SNP 0035.scaffold00136 135546 1 C T - ReadM SNP 0035.scaffold00136 135605 1 A G - ReadM SNP 0035.scaffold00136 135648 1 A G - ReadM SNP 0035.scaffold00136 135764 1 G A - ReadM SNP 0035.scaffold00136 135773 1 A C - ReadM SNP 0035.scaffold00136 135822 1 G A - ReadM SNP 0035.scaffold00136 135831 1 C T - ReadM SNP 0035.scaffold00136 135900 1 G A - ReadM SNP 0035.scaffold00136 135980 1 T G - ReadM SNP 0035.scaffold00136 136025 1 T C - ReadM INDEL 0035.scaffold00136 136158 1 . A - ReadM SNP 0035.scaffold00136 136220 1 G T - ReadM SNP 0035.scaffold00136 136229 1 T C - ReadM SNP 0035.scaffold00136 137423 1 T C - ReadM SNP 0035.scaffold00136 137562 1 T C - ReadM SNP 0035.scaffold00136 137573 1 G A - ReadM SNP 0035.scaffold00136 137656 1 C A - ReadM SNP 0035.scaffold00136 137661 1 C T - ReadM SNP 0035.scaffold00136 137732 1 T G - ReadM SNP 0035.scaffold00136 137931 1 C T - ReadM SNP 0035.scaffold00136 138050 1 C T - ScafM SNP 0035.scaffold00136 138322 1 T C scaffold12740 ScafM SNP 0035.scaffold00136 138330 1 A C scaffold12740 ScafM SNP 0035.scaffold00136 138366 1 A C scaffold12740 ScafM SNP 0035.scaffold00136 138395 1 T G scaffold12740 ScafM SNP 0035.scaffold00136 138409 1 G A scaffold12740 ReadM SNP 0035.scaffold00136 139055 1 T A - ReadM SNP 0035.scaffold00136 139091 1 A G - ReadM SNP 0035.scaffold00136 139139 1 T C - ReadM SNP 0035.scaffold00136 139145 1 G A - ReadM SNP 0035.scaffold00136 139777 1 C A - ReadM SNP 0035.scaffold00136 140782 1 C T - ReadM SNP 0035.scaffold00136 141261 1 A G - ReadM SNP 0035.scaffold00136 141291 1 A C - ReadM SNP 0035.scaffold00136 143801 1 C T - ReadM SNP 0035.scaffold00136 143864 1 C A - ReadM SNP 0035.scaffold00136 145826 1 G A - ReadM SNP 0035.scaffold00136 145885 1 A G - ReadM SNP 0035.scaffold00136 147531 1 G A - Both SNP 0035.scaffold00136 147576 1 A C scaffold7439 ScafM SNP 0035.scaffold00136 147597 1 C G scaffold7439 Both SNP 0035.scaffold00136 147718 1 T C scaffold7439 Both SNP 0035.scaffold00136 147728 1 G A scaffold7439 Both INDEL 0035.scaffold00136 147786 1 G . scaffold7439 ScafM SNP 0035.scaffold00136 147789 1 C A scaffold7439 Both SNP 0035.scaffold00136 147803 1 A C scaffold7439 ScafM SNP 0035.scaffold00136 147922 1 T C scaffold7439 ScafM SNP 0035.scaffold00136 147926 1 G T scaffold7439 ScafM SNP 0035.scaffold00136 147929 1 A T scaffold7439 Both SNP 0035.scaffold00136 147950 1 C T scaffold7439 Both SNP 0035.scaffold00136 148030 1 G A scaffold7439 Both SNP 0035.scaffold00136 148042 1 G T scaffold7439 Both SNP 0035.scaffold00136 148048 1 A G scaffold7439 ScafM SNP 0035.scaffold00136 148095 1 T A scaffold7439 ScafM INDEL 0035.scaffold00136 148111 26 TATGGACCTAATATTGGACGTAGTCC .......................... scaffold7439 ScafM SNP 0035.scaffold00136 148184 2 AA GG scaffold7439 ReadM SNP 0035.scaffold00136 148232 1 A G - ReadM SNP 0035.scaffold00136 148277 1 G A - ReadM SNP 0035.scaffold00136 148304 1 G T - ReadM SNP 0035.scaffold00136 148385 1 T A - ReadM SNP 0035.scaffold00136 148433 1 A T - ReadM SNP 0035.scaffold00136 148448 1 T C - ReadM SNP 0035.scaffold00136 148478 1 C T - ReadM SNP 0035.scaffold00136 148658 1 G T - ReadM SNP 0035.scaffold00136 148661 1 T A - ReadM SNP 0035.scaffold00136 148721 1 T C - ReadM SNP 0035.scaffold00136 148751 1 A G - ReadM SNP 0035.scaffold00136 148816 1 T C - ReadM SNP 0035.scaffold00136 148829 1 C T - ReadM SNP 0035.scaffold00136 148850 1 T C - ReadM SNP 0035.scaffold00136 148878 1 T C - ReadM SNP 0035.scaffold00136 148939 1 G A - ReadM SNP 0035.scaffold00136 148956 1 A T - Both SNP 0035.scaffold00136 149097 1 T C scaffold7439 ScafM SNP 0035.scaffold00136 149099 1 G A scaffold7439 Both SNP 0035.scaffold00136 149129 1 C T scaffold7439 Both SNP 0035.scaffold00136 149188 1 C T scaffold7439 ReadM SNP 0035.scaffold00136 149237 1 A G - ReadM SNP 0035.scaffold00136 149290 1 C T - ReadM SNP 0035.scaffold00136 149292 1 G A - Both SNP 0035.scaffold00136 149347 1 T G scaffold7439 Both SNP 0035.scaffold00136 149375 1 A C scaffold7439 ScafM SNP 0035.scaffold00136 149386 1 C T scaffold7439 Both SNP 0035.scaffold00136 149536 1 C A scaffold7439 ScafM SNP 0035.scaffold00136 149549 1 G T scaffold7439 Both SNP 0035.scaffold00136 149602 1 T C scaffold7439 Both SNP 0035.scaffold00136 149678 1 A C scaffold7439 ReadM SNP 0035.scaffold00136 149725 1 G A - Both SNP 0035.scaffold00136 149937 1 C T scaffold7439 Both SNP 0035.scaffold00136 149956 1 T C scaffold7439 Both SNP 0035.scaffold00136 150095 1 A G scaffold7439 Both SNP 0035.scaffold00136 150124 1 A G scaffold7439 ReadM SNP 0035.scaffold00136 150193 1 C A - ReadM SNP 0035.scaffold00136 150239 1 G C - ReadM SNP 0035.scaffold00136 150269 1 T G - ReadM INDEL 0035.scaffold00136 150290 1 . C - ScafM SNP 0035.scaffold00136 150320 2 TC CT scaffold2154 ScafM SNP 0035.scaffold00136 150334 1 G A scaffold2154 ScafM INDEL 0035.scaffold00136 150346 1 A . scaffold2154 ScafM SNP 0035.scaffold00136 150353 1 C T scaffold2154 ScafM SNP 0035.scaffold00136 150358 1 T G scaffold2154 ScafM SNP 0035.scaffold00136 150380 1 A C scaffold2154 ScafM SNP 0035.scaffold00136 150383 1 T C scaffold2154 ScafM SNP 0035.scaffold00136 150405 1 A C scaffold2154 ScafM SNP 0035.scaffold00136 150407 1 C G scaffold2154 ScafM SNP 0035.scaffold00136 150414 1 C A scaffold2154 ScafM INDEL 0035.scaffold00136 150435 1 T . scaffold2154 ScafM INDEL 0035.scaffold00136 150442 1 . T scaffold2154 ScafM SNP 0035.scaffold00136 150457 1 A G scaffold2154 ScafM SNP 0035.scaffold00136 150470 2 AT TC scaffold2154 ScafM SNP 0035.scaffold00136 150487 1 G T scaffold2154 ScafM SNP 0035.scaffold00136 150497 1 T A scaffold2154 ScafM INDEL 0035.scaffold00136 150507 5 TTTAA ..... scaffold2154 ReadM SNP 0035.scaffold00136 150671 1 T C - ReadM SNP 0035.scaffold00136 150773 1 T A - ReadM SNP 0035.scaffold00136 150788 1 C T - ReadM SNP 0035.scaffold00136 150862 1 A T - ReadM SNP 0035.scaffold00136 151105 1 G A - ReadM SNP 0035.scaffold00136 151115 1 G T - ReadM SNP 0035.scaffold00136 151358 1 C T - ReadM SNP 0035.scaffold00136 151397 1 A C - ReadM SNP 0035.scaffold00136 151592 1 A G - ReadM SNP 0035.scaffold00136 151680 1 C T - ReadM SNP 0035.scaffold00136 151769 1 A C - ReadM SNP 0035.scaffold00136 151902 1 T G - ReadM SNP 0035.scaffold00136 152159 1 C T - ReadM SNP 0035.scaffold00136 152165 1 A C - ReadM SNP 0035.scaffold00136 152225 1 T C - ReadM SNP 0035.scaffold00136 152254 1 C T - ReadM SNP 0035.scaffold00136 152268 1 T A - ReadM SNP 0035.scaffold00136 152322 1 T C - ReadM SNP 0035.scaffold00136 152356 1 T C - ReadM SNP 0035.scaffold00136 152417 1 C T - ReadM SNP 0035.scaffold00136 152455 1 A G - ReadM SNP 0035.scaffold00136 152490 1 C G - ReadM SNP 0035.scaffold00136 152550 1 A G - ReadM SNP 0035.scaffold00136 152634 1 C T - ScafM SNP 0035.scaffold00136 152721 1 T G scaffold7439 ScafM SNP 0035.scaffold00136 152730 1 A C scaffold7439 ReadM SNP 0035.scaffold00136 152780 1 C G - ReadM SNP 0035.scaffold00136 152791 1 C A - ReadM SNP 0035.scaffold00136 152873 1 A T - ReadM SNP 0035.scaffold00136 152997 1 A G - ReadM SNP 0035.scaffold00136 153021 1 C T - ReadM SNP 0035.scaffold00136 153325 1 T C - ReadM SNP 0035.scaffold00136 153518 1 T A - ReadM SNP 0035.scaffold00136 153923 1 A C - ReadM SNP 0035.scaffold00136 155369 1 C T - ReadM SNP 0035.scaffold00136 155489 1 C G - ReadM SNP 0035.scaffold00136 155505 1 A G - ReadM SNP 0035.scaffold00136 155539 1 A C - ReadM SNP 0035.scaffold00136 156114 1 T C - ReadM SNP 0035.scaffold00136 156601 1 A T - ReadM SNP 0035.scaffold00136 156646 1 G A - ReadM SNP 0035.scaffold00136 156653 1 A G - ReadM SNP 0035.scaffold00136 156715 1 G T - ReadM SNP 0035.scaffold00136 156944 1 C T - ReadM SNP 0035.scaffold00136 157030 1 A C - ReadM SNP 0035.scaffold00136 157115 1 G A - ReadM SNP 0035.scaffold00136 157124 1 C T - ReadM SNP 0035.scaffold00136 157132 1 A G - ReadM SNP 0035.scaffold00136 157168 1 G T - ReadM SNP 0035.scaffold00136 157239 1 T A - ReadM SNP 0035.scaffold00136 157250 1 G A - ReadM SNP 0035.scaffold00136 157366 1 A G - ReadM INDEL 0035.scaffold00136 157385 1 . C - ReadM SNP 0035.scaffold00136 157442 1 T C - ReadM SNP 0035.scaffold00136 157503 1 T C - ReadM SNP 0035.scaffold00136 157532 1 A C - ReadM SNP 0035.scaffold00136 157597 1 C A - ReadM SNP 0035.scaffold00136 157623 1 T C - ReadM SNP 0035.scaffold00136 157647 1 T C - ReadM SNP 0035.scaffold00136 157670 1 G T - ReadM SNP 0035.scaffold00136 157770 1 T G - ReadM SNP 0035.scaffold00136 157783 1 C A - ScafM INDEL 0035.scaffold00136 159898 8 ........ AATATGTT scaffold7439 ScafM SNP 0035.scaffold00136 159950 1 A C scaffold7439 ScafM SNP 0035.scaffold00136 160062 1 T G scaffold7439 ScafM INDEL 0035.scaffold00136 160282 1 . T scaffold7439 ScafM SNP 0035.scaffold00136 160404 1 C T scaffold7439 ScafM SNP 0035.scaffold00136 160460 1 C T scaffold7439 ScafM SNP 0035.scaffold00136 160543 1 C G scaffold7439 ScafM INDEL 0035.scaffold00136 160601 2 .. CG scaffold7439 ScafM SNP 0035.scaffold00136 160603 1 A T scaffold7439 ScafM SNP 0035.scaffold00136 160655 1 A T scaffold7439 ScafM SNP 0035.scaffold00136 160722 1 G A scaffold7439 ScafM SNP 0035.scaffold00136 160724 1 G T scaffold7439 ScafM SNP 0035.scaffold00136 160736 1 C T scaffold7439 ScafM INDEL 0035.scaffold00136 161302 19 TTGTTTCAATCGAATCCTA ................... scaffold7439 ScafM SNP 0035.scaffold00136 161354 1 T C scaffold7439 Both SNP 0035.scaffold00136 161601 1 G A scaffold7439 Both SNP 0035.scaffold00136 161641 1 C A scaffold7439 ScafM SNP 0035.scaffold00136 161687 1 C G scaffold7439 ScafM SNP 0035.scaffold00136 161690 1 A T scaffold7439 ScafM INDEL 0035.scaffold00136 161692 2 CC .. scaffold7439 ScafM SNP 0035.scaffold00136 161718 2 CC AA scaffold7439 ScafM SNP 0035.scaffold00136 161775 1 T G scaffold7439 ScafM SNP 0035.scaffold00136 161793 1 G A scaffold7439 ScafM SNP 0035.scaffold00136 161802 1 C A scaffold7439 ScafM SNP 0035.scaffold00136 161817 1 A T scaffold7439 ScafM SNP 0035.scaffold00136 161865 1 A T scaffold7439 ScafM SNP 0035.scaffold00136 161868 1 T C scaffold7439 ScafM SNP 0035.scaffold00136 162446 1 A C C19700281 ScafM SNP 0035.scaffold00136 162454 1 G C C19700281 ScafM SNP 0035.scaffold00136 162462 1 G T C19700281 ScafM SNP 0035.scaffold00136 162497 1 A G C19700281 ScafM SNP 0035.scaffold00136 162546 1 G A C19700281 ScafM SNP 0035.scaffold00136 162575 1 T C C19700281 ScafM SNP 0035.scaffold00136 162598 1 A G C19700281 ScafM SNP 0035.scaffold00136 162605 1 T A C19700281 ScafM INDEL 0035.scaffold00136 162608 1 . G C19700281 ScafM SNP 0035.scaffold00136 162615 1 C T C19700281 ScafM INDEL 0035.scaffold00136 162647 2 .. AA C19700281 ScafM SNP 0035.scaffold00136 162810 1 A G C19700281 ScafM SNP 0035.scaffold00136 162824 1 A T C19700281 ScafM SNP 0035.scaffold00136 162846 1 G A C19700281 ScafM SNP 0035.scaffold00136 162935 1 C A C19700281 ScafM SNP 0035.scaffold00136 163003 1 A G C19700281 Both SNP 0035.scaffold00136 163141 1 T C C19700281 ScafM INDEL 0035.scaffold00136 163193 3 TAA ... C19700281 ScafM INDEL 0035.scaffold00136 163203 4 TCTA .... C19700281 ScafM INDEL 0035.scaffold00136 163222 2 AG .. C19700281 ScafM SNP 0035.scaffold00136 163272 1 A T C19700281 ScafM SNP 0035.scaffold00136 163280 1 A G C19700281 Both SNP 0035.scaffold00136 163471 1 G T C19700281 Both SNP 0035.scaffold00136 163517 1 A T C19700281 Both SNP 0035.scaffold00136 163543 1 G A C19700281 Both SNP 0035.scaffold00136 163575 1 G A C19700281 Both SNP 0035.scaffold00136 163651 1 G T C19700281 Both SNP 0035.scaffold00136 163664 1 T C C19700281 Both SNP 0035.scaffold00136 163743 1 A G C19700281 ScafM SNP 0035.scaffold00136 163769 1 A G C19700281 ScafM INDEL 0035.scaffold00136 163791 1 . C C19700281 ScafM SNP 0035.scaffold00136 163795 1 G C C19700281 ReadM SNP 0035.scaffold00136 163996 1 A G - ReadM SNP 0035.scaffold00136 164051 1 G A - ReadM INDEL 0035.scaffold00136 164130 1 . T - Both SNP 0035.scaffold00136 164174 1 C T C19675377 Both SNP 0035.scaffold00136 164227 1 A G C19675377 ReadM SNP 0035.scaffold00136 164354 1 T G - ReadM SNP 0035.scaffold00136 164469 1 T A - ReadM SNP 0035.scaffold00136 164474 1 A T - ReadM SNP 0035.scaffold00136 164716 1 A G - ReadM SNP 0035.scaffold00136 164758 1 C T - ReadM SNP 0035.scaffold00136 164983 1 C T - ReadM SNP 0035.scaffold00136 165000 1 C T - ReadM SNP 0035.scaffold00136 165019 1 C A - ReadM SNP 0035.scaffold00136 165103 1 G A - ReadM SNP 0035.scaffold00136 165271 1 C T - ReadM SNP 0035.scaffold00136 165322 1 G A - ReadM SNP 0035.scaffold00136 165370 1 A G - ReadM SNP 0035.scaffold00136 166548 1 A T - ReadM SNP 0035.scaffold00136 166603 1 A C - ReadM SNP 0035.scaffold00136 166660 1 C G - ReadM SNP 0035.scaffold00136 167055 1 A G - ReadM SNP 0035.scaffold00136 167075 1 G C - ReadM SNP 0035.scaffold00136 167090 1 A G - ReadM SNP 0035.scaffold00136 167281 1 C T - ReadM SNP 0035.scaffold00136 167301 1 A G - ScafM SNP 0035.scaffold00136 168670 1 A G scaffold22199 ScafM SNP 0035.scaffold00136 168679 1 C T scaffold22199 ScafM SNP 0035.scaffold00136 168688 1 A C scaffold22199 ScafM SNP 0035.scaffold00136 169553 1 C T scaffold22199 ScafM INDEL 0035.scaffold00136 169564 1 . G scaffold22199 ScafM SNP 0035.scaffold00136 169570 1 T G scaffold22199 ScafM SNP 0035.scaffold00136 169574 1 G T scaffold22199 ScafM SNP 0035.scaffold00136 169588 1 C A scaffold22199 ScafM SNP 0035.scaffold00136 169601 1 A T scaffold22199 ScafM INDEL 0035.scaffold00136 169606 2 GA .. scaffold22199 ScafM INDEL 0035.scaffold00136 169609 1 G . scaffold22199 ReadM SNP 0035.scaffold00136 170140 1 C T - ReadM INDEL 0035.scaffold00136 170233 1 . G - ReadM SNP 0035.scaffold00136 170305 1 C T - ReadM INDEL 0035.scaffold00136 170308 1 C . - ReadM SNP 0035.scaffold00136 170400 1 G A - ReadM INDEL 0035.scaffold00136 170422 1 . A - ReadM SNP 0035.scaffold00136 170510 1 G A - ReadM SNP 0035.scaffold00136 170523 1 T C - ReadM SNP 0035.scaffold00136 170575 1 T A - ReadM SNP 0035.scaffold00136 170577 1 G A - ReadM SNP 0035.scaffold00136 170682 1 C G - ReadM SNP 0035.scaffold00136 170696 1 T C - ReadM INDEL 0035.scaffold00136 170786 1 . A - ReadM SNP 0035.scaffold00136 170888 1 A T - ReadM INDEL 0035.scaffold00136 170904 1 A . - ReadM SNP 0035.scaffold00136 171042 1 C T - ReadM SNP 0035.scaffold00136 171157 1 G A - ReadM SNP 0035.scaffold00136 171185 1 G A - ScafM SNP 0035.scaffold00136 171366 1 A G scaffold21787 ScafM SNP 0035.scaffold00136 171374 1 T C scaffold21787 ScafM SNP 0035.scaffold00136 171400 1 C T scaffold21787 ScafM SNP 0035.scaffold00136 171404 1 C T scaffold21787 ScafM SNP 0035.scaffold00136 171413 1 G A scaffold21787 ScafM SNP 0035.scaffold00136 171433 1 A T scaffold21787 ScafM SNP 0035.scaffold00136 171435 1 A T scaffold21787 ScafM INDEL 0035.scaffold00136 171519 1 . C scaffold21787 ScafM SNP 0035.scaffold00136 171535 1 C T scaffold21787 ScafM INDEL 0035.scaffold00136 171586 32 AAGGAAGCCTAGAACTGTAATAATCTTATTGA ................................ scaffold21787 ScafM SNP 0035.scaffold00136 171627 1 T A scaffold21787 ScafM SNP 0035.scaffold00136 171656 1 C T scaffold21787 ScafM SNP 0035.scaffold00136 171663 2 CC TT scaffold21787 ScafM SNP 0035.scaffold00136 171690 1 A T scaffold21787 ScafM SNP 0035.scaffold00136 171731 1 A G scaffold21787 ScafM SNP 0035.scaffold00136 171739 2 TT AG scaffold21787 ScafM SNP 0035.scaffold00136 171817 1 T C scaffold21787 ScafM SNP 0035.scaffold00136 171823 1 T G scaffold21787 ScafM SNP 0035.scaffold00136 171888 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 171897 1 T C scaffold19845 ScafM INDEL 0035.scaffold00136 171930 1 . A scaffold19845 ScafM SNP 0035.scaffold00136 171967 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 172020 1 T G scaffold19845 ScafM SNP 0035.scaffold00136 172062 1 C G scaffold19845 ScafM SNP 0035.scaffold00136 172073 1 T C scaffold19845 ReadM SNP 0035.scaffold00136 172358 1 T C - ReadM SNP 0035.scaffold00136 172418 1 T C - ReadM SNP 0035.scaffold00136 172452 1 G T - ReadM SNP 0035.scaffold00136 172479 1 T G - ReadM SNP 0035.scaffold00136 172513 1 G A - Both SNP 0035.scaffold00136 172567 1 G T scaffold19845 Both SNP 0035.scaffold00136 172593 1 C A scaffold19845 Both SNP 0035.scaffold00136 172611 1 A T scaffold19845 Both SNP 0035.scaffold00136 172670 1 A G scaffold19845 ScafM INDEL 0035.scaffold00136 172686 1 A . scaffold19845 ScafM SNP 0035.scaffold00136 172693 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 172700 1 T A scaffold19845 ScafM SNP 0035.scaffold00136 172703 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 172759 4 TTTT ACAA scaffold19845 ScafM SNP 0035.scaffold00136 172772 1 T G scaffold19845 ScafM INDEL 0035.scaffold00136 172786 1 . A scaffold19845 ScafM INDEL 0035.scaffold00136 172806 1 T . scaffold19845 ScafM SNP 0035.scaffold00136 172834 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 172884 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 172891 1 A T scaffold19845 ScafM SNP 0035.scaffold00136 172977 1 A C scaffold19845 ScafM INDEL 0035.scaffold00136 173013 1 . A scaffold19845 ScafM SNP 0035.scaffold00136 173043 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 173069 1 A C scaffold19845 ScafM SNP 0035.scaffold00136 173085 1 A G scaffold19845 Both SNP 0035.scaffold00136 173109 1 T C scaffold19845 Both SNP 0035.scaffold00136 173144 1 A T scaffold19845 Both SNP 0035.scaffold00136 173169 1 G A scaffold19845 Both SNP 0035.scaffold00136 173305 1 T A scaffold19845 Both SNP 0035.scaffold00136 173318 1 A G scaffold19845 ReadM SNP 0035.scaffold00136 173502 1 A G - ReadM SNP 0035.scaffold00136 173526 1 A G - ReadM SNP 0035.scaffold00136 173663 1 C T - ReadM SNP 0035.scaffold00136 173679 1 T C - ReadM SNP 0035.scaffold00136 173701 1 G A - ReadM SNP 0035.scaffold00136 173730 1 T C - ReadM SNP 0035.scaffold00136 173732 1 G A - ReadM SNP 0035.scaffold00136 173778 1 G C - ReadM SNP 0035.scaffold00136 173856 1 A G - ReadM SNP 0035.scaffold00136 173892 1 T A - ReadM SNP 0035.scaffold00136 173999 1 A G - Both SNP 0035.scaffold00136 174152 1 C T scaffold19845 Both SNP 0035.scaffold00136 174201 1 C T scaffold19845 ScafM INDEL 0035.scaffold00136 174242 9 ACCGAGAGA ......... scaffold19845 ScafM SNP 0035.scaffold00136 174273 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 174277 1 A G scaffold19845 ReadM SNP 0035.scaffold00136 174321 1 A G - ReadM SNP 0035.scaffold00136 174358 1 C G - ReadM SNP 0035.scaffold00136 174392 1 C A - ReadM SNP 0035.scaffold00136 174412 1 T C - ReadM SNP 0035.scaffold00136 174526 1 T C - ReadM SNP 0035.scaffold00136 174544 1 A G - ReadM SNP 0035.scaffold00136 174580 1 A T - ReadM SNP 0035.scaffold00136 174922 1 A G - ReadM SNP 0035.scaffold00136 175080 1 T A - ReadM SNP 0035.scaffold00136 175083 1 C T - ReadM SNP 0035.scaffold00136 175203 1 G C - ReadM SNP 0035.scaffold00136 175217 1 C T - ReadM SNP 0035.scaffold00136 175299 1 G T - ReadM SNP 0035.scaffold00136 175391 1 T C - ReadM SNP 0035.scaffold00136 175504 1 T A - ReadM SNP 0035.scaffold00136 175613 1 A G - ReadM SNP 0035.scaffold00136 175644 1 T A - ReadM SNP 0035.scaffold00136 175691 1 G T - ReadM SNP 0035.scaffold00136 175761 1 G T - ReadM SNP 0035.scaffold00136 175763 1 A T - ReadM SNP 0035.scaffold00136 175846 1 C T - ReadM SNP 0035.scaffold00136 175861 1 C A - ReadM SNP 0035.scaffold00136 176124 1 A G - ReadM SNP 0035.scaffold00136 176139 1 A G - ReadM SNP 0035.scaffold00136 176217 2 TA CG - ScafM SNP 0035.scaffold00136 178623 1 C A scaffold19845 ScafM SNP 0035.scaffold00136 178641 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 178645 1 G A scaffold19845 ReadM SNP 0035.scaffold00136 178856 1 T C - ReadM SNP 0035.scaffold00136 178950 1 G T - ReadM SNP 0035.scaffold00136 179082 1 C T - ReadM SNP 0035.scaffold00136 179114 1 G A - ReadM SNP 0035.scaffold00136 179221 1 G A - ReadM SNP 0035.scaffold00136 179239 1 G A - ReadM SNP 0035.scaffold00136 179365 1 A G - ReadM SNP 0035.scaffold00136 179435 1 G A - ReadM SNP 0035.scaffold00136 179464 1 T C - Both SNP 0035.scaffold00136 179488 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 179598 1 G C scaffold19845 Both SNP 0035.scaffold00136 179606 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 179646 1 T G scaffold19845 ScafM SNP 0035.scaffold00136 179657 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 179665 1 T G scaffold19845 ScafM SNP 0035.scaffold00136 179670 1 G A scaffold19845 ScafM SNP 0035.scaffold00136 179686 1 T C scaffold19845 ScafM SNP 0035.scaffold00136 179689 1 A T scaffold19845 ScafM SNP 0035.scaffold00136 179700 1 G A scaffold19845 ScafM SNP 0035.scaffold00136 179715 1 A T scaffold19845 ReadM SNP 0035.scaffold00136 179767 1 C A - ScafM INDEL 0035.scaffold00136 179975 5 ..... CTTAA scaffold19845 ScafM SNP 0035.scaffold00136 180015 1 G A scaffold19845 ScafM SNP 0035.scaffold00136 180018 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 180038 1 A T scaffold19845 ScafM SNP 0035.scaffold00136 180053 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 180164 1 C T scaffold19845 ScafM SNP 0035.scaffold00136 180175 1 T C scaffold19845 ScafM SNP 0035.scaffold00136 180248 1 C G scaffold19845 ScafM SNP 0035.scaffold00136 180262 1 T G scaffold19845 ScafM INDEL 0035.scaffold00136 180266 1 . A scaffold19845 ScafM INDEL 0035.scaffold00136 180487 1 T . scaffold19845 ScafM SNP 0035.scaffold00136 180497 1 A C scaffold19845 ScafM INDEL 0035.scaffold00136 180502 2 TG .. scaffold19845 ScafM SNP 0035.scaffold00136 180548 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 180557 1 A C scaffold19845 ScafM SNP 0035.scaffold00136 180980 1 T C scaffold19845 ScafM SNP 0035.scaffold00136 180985 1 T A scaffold19845 Both SNP 0035.scaffold00136 181032 1 C A scaffold19845 Both SNP 0035.scaffold00136 181098 1 C T scaffold19845 Both SNP 0035.scaffold00136 181100 1 A G scaffold19845 Both SNP 0035.scaffold00136 181104 1 G A scaffold19845 ScafM SNP 0035.scaffold00136 181181 1 G A scaffold19845 Both SNP 0035.scaffold00136 181275 1 A G scaffold19845 ReadM INDEL 0035.scaffold00136 181354 2 TT .. - ReadM INDEL 0035.scaffold00136 181418 1 . G - ReadM SNP 0035.scaffold00136 181505 1 A C - ReadM INDEL 0035.scaffold00136 181514 1 A . - ReadM SNP 0035.scaffold00136 181704 1 G A - ReadM SNP 0035.scaffold00136 181708 1 T C - ReadM SNP 0035.scaffold00136 181753 1 C G - ReadM SNP 0035.scaffold00136 181820 1 G A - ReadM SNP 0035.scaffold00136 181826 1 G A - ReadM SNP 0035.scaffold00136 181950 1 A G - ReadM SNP 0035.scaffold00136 181977 1 T C - ReadM SNP 0035.scaffold00136 182106 1 C G - ReadM SNP 0035.scaffold00136 182575 1 T G - ReadM SNP 0035.scaffold00136 182616 1 A G - ReadM SNP 0035.scaffold00136 182619 1 T G - ScafM SNP 0035.scaffold00136 182755 1 A G scaffold19845 ScafM SNP 0035.scaffold00136 182767 1 G A scaffold19845 ScafM SNP 0035.scaffold00136 182770 1 G T scaffold19845 ScafM SNP 0035.scaffold00136 182793 1 C A scaffold19845 ScafM SNP 0035.scaffold00136 182802 1 G A scaffold19845 Both SNP 0035.scaffold00136 182842 1 T G scaffold19845 Both SNP 0035.scaffold00136 182890 1 T C scaffold19845 ScafM SNP 0035.scaffold00136 182986 1 C G scaffold19845 ScafM INDEL 0035.scaffold00136 183090 4 .... GCGC scaffold19845 ScafM SNP 0035.scaffold00136 183107 1 T G scaffold19845 ReadM SNP 0035.scaffold00136 183288 1 T A - ReadM SNP 0035.scaffold00136 183362 1 G A - ReadM SNP 0035.scaffold00136 183682 1 A G - ScafM SNP 0035.scaffold00136 184024 1 A G scaffold66394 Both SNP 0035.scaffold00136 184109 1 A C scaffold66394 ScafM SNP 0035.scaffold00136 184141 1 A T scaffold66394 ScafM INDEL 0035.scaffold00136 184173 11 ........... CTCTTCACGGA scaffold66394 ScafM INDEL 0035.scaffold00136 184174 7 ....... TTCTTTT scaffold66394 ScafM INDEL 0035.scaffold00136 184179 21 ..................... CAAAAAATGGTGCATGATATT scaffold66394 ScafM INDEL 0035.scaffold00136 184180 4 .... ATAT scaffold66394 ScafM INDEL 0035.scaffold00136 184256 3 ... TAA scaffold66394 ScafM INDEL 0035.scaffold00136 184331 3 ... AGA scaffold66394 ScafM SNP 0035.scaffold00136 184474 1 C G scaffold66394 ScafM SNP 0035.scaffold00136 184510 1 T A scaffold66394 ScafM SNP 0035.scaffold00136 184527 1 C A scaffold66394 ScafM SNP 0035.scaffold00136 184619 1 A T scaffold66394 ScafM INDEL 0035.scaffold00136 184629 7 AATTATC ....... scaffold66394 ScafM SNP 0035.scaffold00136 184686 1 T G scaffold66394 ScafM SNP 0035.scaffold00136 184718 1 G A scaffold66394 ScafM SNP 0035.scaffold00136 184720 1 G A scaffold66394 ScafM SNP 0035.scaffold00136 184958 1 C T scaffold29025 ReadM SNP 0035.scaffold00136 185570 1 T C - ReadM SNP 0035.scaffold00136 185590 1 T G - ScafM SNP 0035.scaffold00136 185689 1 A T scaffold29025 ScafM SNP 0035.scaffold00136 185707 1 A C scaffold29025 Both SNP 0035.scaffold00136 185743 1 T C scaffold29025 ScafM SNP 0035.scaffold00136 185781 1 C A scaffold29025 ReadM SNP 0035.scaffold00136 185884 1 T G - ScafM SNP 0035.scaffold00136 186034 1 G A scaffold74980 Both SNP 0035.scaffold00136 186045 2 TA GG scaffold74980 Both SNP 0035.scaffold00136 186153 1 T C scaffold74980 ScafM SNP 0035.scaffold00136 186179 2 GG AC scaffold74980 ReadM SNP 0035.scaffold00136 186180 1 G C - Both SNP 0035.scaffold00136 186285 1 G T scaffold74980 Both SNP 0035.scaffold00136 186369 1 T A scaffold74980 Both SNP 0035.scaffold00136 186444 1 G A scaffold74980 ScafM SNP 0035.scaffold00136 186539 1 G A scaffold74980 Both SNP 0035.scaffold00136 186641 1 C G scaffold74980 Both SNP 0035.scaffold00136 186832 1 G A scaffold74980 Both SNP 0035.scaffold00136 186867 1 G C scaffold74980 Both SNP 0035.scaffold00136 186931 1 C T scaffold74980 Both SNP 0035.scaffold00136 186968 1 G C scaffold74980 ReadM SNP 0035.scaffold00136 187028 1 G A - ReadM SNP 0035.scaffold00136 187055 1 A G - ReadM SNP 0035.scaffold00136 187201 1 C T - ReadM SNP 0035.scaffold00136 191099 1 A G - ReadM SNP 0035.scaffold00136 191187 1 A G - ReadM SNP 0035.scaffold00136 192320 2 CA TT - ReadM SNP 0035.scaffold00136 192443 1 G C - ReadM SNP 0035.scaffold00136 192544 1 G A - ReadM SNP 0035.scaffold00136 192654 1 T C - ReadM SNP 0035.scaffold00136 192671 1 A T - ReadM SNP 0035.scaffold00136 192767 1 C T - ReadM SNP 0035.scaffold00136 192829 1 T C - ReadM SNP 0035.scaffold00136 192885 1 A C - ReadM SNP 0035.scaffold00136 192906 1 G T - ReadM SNP 0035.scaffold00136 193164 1 G T - ReadM SNP 0035.scaffold00136 202042 1 T C - ScafM SNP 0035.scaffold00136 202180 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 202250 1 C T scaffold48328 Both SNP 0035.scaffold00136 202277 1 C T scaffold48328 ScafM INDEL 0035.scaffold00136 202333 2 .. TC scaffold48328 Both SNP 0035.scaffold00136 202365 1 G A scaffold48328 Both SNP 0035.scaffold00136 202389 1 A C scaffold48328 Both SNP 0035.scaffold00136 202495 1 C A scaffold48328 Both SNP 0035.scaffold00136 202659 1 T C scaffold48328 Both INDEL 0035.scaffold00136 202670 1 . T scaffold48328 ScafM INDEL 0035.scaffold00136 202745 1 . G scaffold48328 ScafM SNP 0035.scaffold00136 202748 1 A G scaffold48328 ScafM SNP 0035.scaffold00136 202751 1 G C scaffold48328 ScafM SNP 0035.scaffold00136 202755 1 T G scaffold48328 Both SNP 0035.scaffold00136 202845 1 G A scaffold48328 Both SNP 0035.scaffold00136 202855 1 G C scaffold48328 ScafM SNP 0035.scaffold00136 202912 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 202930 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 202942 1 A T scaffold48328 ScafM INDEL 0035.scaffold00136 203051 1 A . scaffold48328 Both SNP 0035.scaffold00136 203114 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 203175 1 T A scaffold48328 Both SNP 0035.scaffold00136 203247 1 C T scaffold48328 Both SNP 0035.scaffold00136 203302 1 C T scaffold48328 Both SNP 0035.scaffold00136 203304 1 A G scaffold48328 ScafM SNP 0035.scaffold00136 203349 1 C T scaffold48328 Both SNP 0035.scaffold00136 203381 1 G A scaffold48328 Both SNP 0035.scaffold00136 203550 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 203648 1 T C scaffold48328 Both SNP 0035.scaffold00136 203701 1 C A scaffold48328 ScafM SNP 0035.scaffold00136 203913 1 C T scaffold48328 Both SNP 0035.scaffold00136 204110 1 A G scaffold48328 ScafM SNP 0035.scaffold00136 204137 1 A T scaffold48328 ScafM SNP 0035.scaffold00136 204359 1 A G scaffold48328 Both SNP 0035.scaffold00136 204444 1 A G scaffold48328 ScafM INDEL 0035.scaffold00136 204507 8 TACTAATA ........ scaffold48328 Both SNP 0035.scaffold00136 204718 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 204802 1 T C scaffold48328 ScafM INDEL 0035.scaffold00136 204909 4 .... ATCC scaffold48328 Both SNP 0035.scaffold00136 205013 1 A G scaffold48328 Both INDEL 0035.scaffold00136 205480 3 ... AAG scaffold48328 Both INDEL 0035.scaffold00136 205519 1 A . scaffold48328 ScafM SNP 0035.scaffold00136 205524 1 T C scaffold48328 Both SNP 0035.scaffold00136 205549 1 C T scaffold48328 ScafM SNP 0035.scaffold00136 205656 1 A G scaffold48328 Both SNP 0035.scaffold00136 205746 1 G A scaffold48328 Both SNP 0035.scaffold00136 205949 1 G A scaffold48328 Both SNP 0035.scaffold00136 206505 1 T C scaffold48328 Both SNP 0035.scaffold00136 206595 1 C T scaffold48328 Both SNP 0035.scaffold00136 207050 1 T A scaffold48328 Both SNP 0035.scaffold00136 207055 1 G C scaffold48328 Both SNP 0035.scaffold00136 207185 1 C G scaffold48328 Both SNP 0035.scaffold00136 207209 1 T G scaffold48328 Both SNP 0035.scaffold00136 207362 1 T A scaffold48328 Both SNP 0035.scaffold00136 207519 1 G T scaffold48328 Both SNP 0035.scaffold00136 207582 1 T C scaffold48328 Both SNP 0035.scaffold00136 207776 1 T C scaffold48328 Both SNP 0035.scaffold00136 207845 1 T G scaffold48328 ReadM SNP 0035.scaffold00136 208005 1 A G - ReadM SNP 0035.scaffold00136 208896 1 C T - ReadM SNP 0035.scaffold00136 208929 1 G C - ReadM SNP 0035.scaffold00136 209328 1 C T - ReadM SNP 0035.scaffold00136 209449 1 A G - ReadM SNP 0035.scaffold00136 209470 1 C T - ReadM SNP 0035.scaffold00136 209736 1 C G - ReadM SNP 0035.scaffold00136 209803 1 A G - ReadM SNP 0035.scaffold00136 210349 1 C A - ScafM INDEL 0035.scaffold00136 217378 2 .. GG C19673569 ScafM SNP 0035.scaffold00136 217385 1 G T C19673569 ScafM SNP 0035.scaffold00136 217440 1 C T C19673569 ScafM SNP 0035.scaffold00136 217893 1 C T C19673569 ScafM SNP 0035.scaffold00136 217896 1 C T C19673569 ScafM SNP 0035.scaffold00136 217904 1 A C C19673569 ScafM SNP 0035.scaffold00136 217988 1 G A C19673569 ScafM SNP 0035.scaffold00136 218001 1 A T C19673569 ScafM SNP 0035.scaffold00136 218012 1 C T C19673569 Both SNP 0035.scaffold00136 218085 1 G A C19673569 Both SNP 0035.scaffold00136 218091 1 T G C19673569 Both SNP 0035.scaffold00136 218128 1 A G C19673569 Both SNP 0035.scaffold00136 218157 1 A G C19673569 ReadM INDEL 0035.scaffold00136 218249 1 A . - ReadM SNP 0035.scaffold00136 218267 1 T C - ScafM SNP 0035.scaffold00136 218375 1 C T scaffold2902 ScafM SNP 0035.scaffold00136 218421 1 G T scaffold2902 ScafM INDEL 0035.scaffold00136 218428 3 ... TTA scaffold2902 ScafM SNP 0035.scaffold00136 218447 1 T C scaffold2902 ScafM SNP 0035.scaffold00136 218450 1 C T scaffold2902 ScafM SNP 0035.scaffold00136 218452 1 A G scaffold2902 ScafM SNP 0035.scaffold00136 218461 1 C A scaffold2902 ScafM SNP 0035.scaffold00136 218463 1 A G scaffold2902 ScafM SNP 0035.scaffold00136 218523 1 A T scaffold2902 ScafM INDEL 0035.scaffold00136 218534 2 .. CT scaffold2902 ScafM INDEL 0035.scaffold00136 218535 5 ..... CACCA scaffold2902 ScafM SNP 0035.scaffold00136 218567 1 A G scaffold2902 ScafM SNP 0035.scaffold00136 218579 2 AC GA scaffold2902 ScafM SNP 0035.scaffold00136 218590 1 T A scaffold2902 ScafM SNP 0035.scaffold00136 218622 1 C T scaffold2902 ScafM SNP 0035.scaffold00136 218638 1 A C scaffold2902 ScafM INDEL 0035.scaffold00136 218656 2 GT .. scaffold2902 ScafM INDEL 0035.scaffold00136 218667 11 TACGCCAGAGC ........... scaffold2902 ReadM SNP 0035.scaffold00136 218673 1 A G - ScafM SNP 0035.scaffold00136 218683 1 A G scaffold2902 ReadM SNP 0035.scaffold00136 220386 1 T A - ReadM SNP 0035.scaffold00136 220466 1 A T - ReadM SNP 0035.scaffold00136 220527 1 A G - ReadM SNP 0035.scaffold00136 220645 1 G A - ReadM SNP 0035.scaffold00136 220707 1 A G - ReadM SNP 0035.scaffold00136 220985 1 T C - ReadM SNP 0035.scaffold00136 221003 1 G A - ReadM INDEL 0035.scaffold00136 221073 2 .. AT - ReadM SNP 0035.scaffold00136 221157 1 A G - ReadM SNP 0035.scaffold00136 221266 1 G C - ReadM SNP 0035.scaffold00136 221319 1 T G - ReadM SNP 0035.scaffold00136 221448 1 C T - ReadM SNP 0035.scaffold00136 221459 1 A G - ReadM SNP 0035.scaffold00136 221584 1 C T - ReadM SNP 0035.scaffold00136 221677 1 A C - ReadM SNP 0035.scaffold00136 221705 1 G A - ReadM INDEL 0035.scaffold00136 221810 1 A . - ReadM INDEL 0035.scaffold00136 222004 1 T . - ReadM SNP 0035.scaffold00136 222039 1 A G - ReadM SNP 0035.scaffold00136 222162 1 A T - ReadM SNP 0035.scaffold00136 222302 1 A G - ReadM SNP 0035.scaffold00136 222310 1 C A - ReadM SNP 0035.scaffold00136 222391 1 G T - ReadM SNP 0035.scaffold00136 222507 1 T A - ReadM SNP 0035.scaffold00136 222634 1 A C - ReadM SNP 0035.scaffold00136 222791 1 T A - ReadM SNP 0035.scaffold00136 222978 1 A G - ReadM SNP 0035.scaffold00136 223051 1 T A - ReadM SNP 0035.scaffold00136 223199 1 T C - ReadM SNP 0035.scaffold00136 223359 1 C T - ReadM SNP 0035.scaffold00136 223984 1 T G - ReadM SNP 0035.scaffold00136 224151 1 C A - ReadM SNP 0035.scaffold00136 224930 1 A C - ReadM SNP 0035.scaffold00136 225185 1 C T - ReadM SNP 0035.scaffold00136 225370 1 G A - ReadM SNP 0035.scaffold00136 225400 1 C T - ReadM SNP 0035.scaffold00136 225467 1 T G - ReadM SNP 0035.scaffold00136 225533 1 G T - ReadM SNP 0035.scaffold00136 225574 1 G T - ReadM SNP 0035.scaffold00136 225596 1 A G - ReadM SNP 0035.scaffold00136 225635 1 A C - ReadM SNP 0035.scaffold00136 225754 1 C T - ReadM SNP 0035.scaffold00136 225762 1 G A - ReadM SNP 0035.scaffold00136 226031 1 C T - ReadM INDEL 0035.scaffold00136 226175 1 . C - ReadM SNP 0035.scaffold00136 226274 1 A G - ReadM SNP 0035.scaffold00136 226276 1 T A - ReadM SNP 0035.scaffold00136 226306 1 T C - Both SNP 0035.scaffold00136 226542 1 A G scaffold30991 Both SNP 0035.scaffold00136 226595 1 T C scaffold30991 Both SNP 0035.scaffold00136 227039 1 G A scaffold30991 ScafM SNP 0035.scaffold00136 227068 1 A G scaffold30991 Both SNP 0035.scaffold00136 227172 1 A C scaffold30991 Both SNP 0035.scaffold00136 227177 1 C A scaffold30991 Both INDEL 0035.scaffold00136 227362 2 .. TT scaffold30991 Both INDEL 0035.scaffold00136 227492 1 A . scaffold30991 Both SNP 0035.scaffold00136 227587 1 C T scaffold30991 ScafM SNP 0035.scaffold00136 227681 1 T G scaffold30991 ScafM INDEL 0035.scaffold00136 227699 5 AAAAG ..... scaffold30991 Both SNP 0035.scaffold00136 227801 1 G A scaffold30991 Both INDEL 0035.scaffold00136 227812 1 . A scaffold30991 Both SNP 0035.scaffold00136 227900 1 T A scaffold30991 ScafM SNP 0035.scaffold00136 228022 1 A G scaffold30991 ScafM SNP 0035.scaffold00136 228047 1 G A scaffold30991 ScafM SNP 0035.scaffold00136 228161 1 C A scaffold30991 ScafM SNP 0035.scaffold00136 228251 1 G C scaffold30991 ScafM SNP 0035.scaffold00136 228263 1 A G scaffold30991 ScafM SNP 0035.scaffold00136 228575 1 A C scaffold59142 ScafM SNP 0035.scaffold00136 228581 1 G A scaffold59142 ScafM SNP 0035.scaffold00136 228589 1 A C scaffold59142 ScafM SNP 0035.scaffold00136 228620 1 A G scaffold59142 ScafM SNP 0035.scaffold00136 228664 1 A G scaffold59142 ScafM SNP 0035.scaffold00136 228678 1 C T scaffold59142 ScafM SNP 0035.scaffold00136 228708 1 G A scaffold59142 ScafM SNP 0035.scaffold00136 228775 1 C T scaffold59142 ScafM SNP 0035.scaffold00136 228777 1 T C scaffold59142 ScafM SNP 0035.scaffold00136 232603 1 G A scaffold22223 ScafM INDEL 0035.scaffold00136 232807 2 AA .. scaffold22223 ScafM SNP 0035.scaffold00136 232810 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 232848 1 A C scaffold22223 ScafM SNP 0035.scaffold00136 232882 1 G C scaffold22223 ScafM SNP 0035.scaffold00136 232924 3 CCT ATC scaffold22223 ScafM SNP 0035.scaffold00136 232954 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 232996 1 C G scaffold22223 ScafM SNP 0035.scaffold00136 233032 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 233080 1 G A scaffold22223 ScafM SNP 0035.scaffold00136 233098 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 233170 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 233195 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 233212 1 T G scaffold22223 ScafM SNP 0035.scaffold00136 233299 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 233765 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 233775 1 G T scaffold22223 ScafM SNP 0035.scaffold00136 233784 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 233819 1 C A scaffold22223 ScafM INDEL 0035.scaffold00136 233866 1 C . scaffold22223 ScafM SNP 0035.scaffold00136 233875 1 G A scaffold22223 ScafM SNP 0035.scaffold00136 233891 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 233930 2 TC GT scaffold22223 ScafM SNP 0035.scaffold00136 233940 1 A T scaffold22223 ScafM SNP 0035.scaffold00136 233949 1 G T scaffold22223 ScafM SNP 0035.scaffold00136 233973 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 234012 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 234050 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 234085 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 234099 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 234122 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 234266 2 AG TA scaffold22223 ScafM SNP 0035.scaffold00136 234303 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 234324 1 G C scaffold22223 ScafM INDEL 0035.scaffold00136 234353 1 T . scaffold22223 ScafM SNP 0035.scaffold00136 234355 1 T C scaffold22223 ScafM SNP 0035.scaffold00136 234361 2 GA TT scaffold22223 ScafM SNP 0035.scaffold00136 234378 1 A T scaffold22223 ScafM SNP 0035.scaffold00136 234391 1 A C scaffold22223 ScafM SNP 0035.scaffold00136 234397 1 A G scaffold22223 ScafM SNP 0035.scaffold00136 234404 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 234422 1 C T scaffold22223 ScafM SNP 0035.scaffold00136 234427 1 A C scaffold22223 Both SNP 0035.scaffold00136 234504 1 A G scaffold22223 ReadM SNP 0035.scaffold00136 235031 2 TA CG - ReadM SNP 0035.scaffold00136 235095 1 T G - ScafM SNP 0035.scaffold00136 235149 1 G A scaffold543 ScafM SNP 0035.scaffold00136 235158 2 TA CG scaffold543 ScafM SNP 0035.scaffold00136 235182 1 A G scaffold543 ReadM SNP 0035.scaffold00136 238069 1 A C - ReadM SNP 0035.scaffold00136 238597 1 T C - ReadM SNP 0035.scaffold00136 238600 1 G A - ReadM SNP 0035.scaffold00136 238920 1 T G - ReadM SNP 0035.scaffold00136 238926 1 G A - ReadM SNP 0035.scaffold00136 239146 1 T G - ReadM SNP 0035.scaffold00136 239150 1 A G - ReadM SNP 0035.scaffold00136 239657 1 A T - ReadM SNP 0035.scaffold00136 240134 1 C T - ReadM SNP 0035.scaffold00136 240157 1 A G - ReadM SNP 0035.scaffold00136 240200 1 A T - ScafM INDEL 0035.scaffold00136 249638 2 .. AC scaffold8614 ScafM SNP 0035.scaffold00136 249640 1 T A scaffold8614 ScafM SNP 0035.scaffold00136 249656 2 GT AC scaffold8614 ScafM SNP 0035.scaffold00136 249704 1 C T scaffold8614 Both SNP 0035.scaffold00136 249775 1 C T scaffold8614 Both SNP 0035.scaffold00136 249831 1 A G scaffold8614 Both SNP 0035.scaffold00136 249918 1 T C scaffold8614 Both SNP 0035.scaffold00136 249991 1 T A scaffold8614 ScafM SNP 0035.scaffold00136 250080 1 C T scaffold8614 ScafM SNP 0035.scaffold00136 250132 1 G T scaffold8614 ScafM INDEL 0035.scaffold00136 250148 6 TGTTCG ...... scaffold8614 ScafM SNP 0035.scaffold00136 250158 1 T G scaffold8614 ScafM SNP 0035.scaffold00136 250161 1 A C scaffold8614 ScafM SNP 0035.scaffold00136 250213 1 T C scaffold8614 ReadM SNP 0035.scaffold00136 255669 1 C T - ScafM SNP 0035.scaffold00136 256205 1 C G scaffold9264 ScafM SNP 0035.scaffold00136 256221 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 256226 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 256242 1 G T scaffold9264 ScafM SNP 0035.scaffold00136 256271 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 256276 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 256287 2 TG CA scaffold9264 ScafM SNP 0035.scaffold00136 256374 1 G T scaffold9264 ScafM SNP 0035.scaffold00136 256411 1 A T scaffold9264 ScafM SNP 0035.scaffold00136 256416 1 C A scaffold9264 ScafM SNP 0035.scaffold00136 256447 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 256527 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 256681 1 C T scaffold9264 ScafM INDEL 0035.scaffold00136 256690 1 A . scaffold9264 ScafM INDEL 0035.scaffold00136 256699 5 TATTA ..... scaffold9264 ScafM SNP 0035.scaffold00136 256730 1 A C scaffold9264 ScafM SNP 0035.scaffold00136 256749 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256793 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256801 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256805 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 256821 1 G A scaffold9264 ScafM INDEL 0035.scaffold00136 256840 3 ... AAA scaffold9264 ScafM SNP 0035.scaffold00136 256867 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256906 2 GT AC scaffold9264 ScafM SNP 0035.scaffold00136 256942 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256981 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 256994 1 A C scaffold9264 ScafM SNP 0035.scaffold00136 257029 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 257044 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 257062 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 257092 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 257154 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257165 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 257198 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257213 1 C A scaffold9264 ScafM SNP 0035.scaffold00136 257215 1 A G scaffold9264 ScafM INDEL 0035.scaffold00136 257253 1 . A scaffold9264 ScafM SNP 0035.scaffold00136 257278 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 257285 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 257307 1 G C scaffold9264 ScafM SNP 0035.scaffold00136 257335 1 G T scaffold9264 ScafM INDEL 0035.scaffold00136 257486 7 ATCTTCC ....... scaffold9264 ScafM INDEL 0035.scaffold00136 257495 2 CC .. scaffold9264 ScafM SNP 0035.scaffold00136 257521 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257528 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257594 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 257604 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257627 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257638 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 257660 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 257687 1 T G scaffold9264 ScafM SNP 0035.scaffold00136 257694 1 G T scaffold9264 Both SNP 0035.scaffold00136 257792 1 G A scaffold9264 Both SNP 0035.scaffold00136 257799 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 257867 1 T G scaffold9264 ScafM SNP 0035.scaffold00136 257880 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 257887 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 257904 1 A C scaffold9264 ScafM SNP 0035.scaffold00136 257908 1 C T scaffold9264 ReadM SNP 0035.scaffold00136 258150 1 A G - Both SNP 0035.scaffold00136 258215 1 C A scaffold9264 Both SNP 0035.scaffold00136 258237 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 258529 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 258540 1 A T scaffold9264 ScafM SNP 0035.scaffold00136 258551 1 A T scaffold9264 ScafM SNP 0035.scaffold00136 258555 1 C T scaffold9264 ScafM INDEL 0035.scaffold00136 258590 1 . C scaffold9264 ScafM SNP 0035.scaffold00136 258623 1 T A scaffold9264 ScafM SNP 0035.scaffold00136 258625 3 TTT AAA scaffold9264 ScafM SNP 0035.scaffold00136 258661 1 A C scaffold9264 Both SNP 0035.scaffold00136 258684 1 T A scaffold9264 Both SNP 0035.scaffold00136 258722 1 T C scaffold9264 ScafM INDEL 0035.scaffold00136 258850 1 A . scaffold9264 ScafM INDEL 0035.scaffold00136 258908 1 . A scaffold9264 ScafM SNP 0035.scaffold00136 258913 1 T G scaffold9264 ScafM SNP 0035.scaffold00136 258928 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 258931 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 258936 1 G T scaffold9264 ScafM INDEL 0035.scaffold00136 258948 7 AATGAAT ....... scaffold9264 ScafM INDEL 0035.scaffold00136 258958 2 TG .. scaffold9264 ScafM INDEL 0035.scaffold00136 258963 7 GAAAAAT ....... scaffold9264 ScafM SNP 0035.scaffold00136 258976 1 A G scaffold9264 ScafM INDEL 0035.scaffold00136 259004 1 C . scaffold9264 ScafM SNP 0035.scaffold00136 259062 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 259097 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 259109 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 259114 2 AT GG scaffold9264 ScafM SNP 0035.scaffold00136 259123 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 259136 2 TC CG scaffold9264 ScafM SNP 0035.scaffold00136 259161 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 259166 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 259182 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 259296 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 259344 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 259389 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 259416 1 A C scaffold9264 ScafM SNP 0035.scaffold00136 259435 1 T C scaffold9264 ScafM INDEL 0035.scaffold00136 259443 1 T . scaffold9264 ScafM SNP 0035.scaffold00136 259447 1 T C scaffold9264 ScafM SNP 0035.scaffold00136 259491 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 259654 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 259669 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 259690 2 GG AA scaffold10440 ScafM SNP 0035.scaffold00136 259697 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 260444 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 260450 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 260460 1 C G scaffold10440 ScafM SNP 0035.scaffold00136 260489 1 G T scaffold10440 ScafM SNP 0035.scaffold00136 260512 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 260516 1 T A scaffold10440 ScafM INDEL 0035.scaffold00136 260522 4 TGTC .... scaffold10440 ScafM SNP 0035.scaffold00136 260548 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 260566 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 260590 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 260645 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 260691 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 260715 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 260754 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 260884 1 A T scaffold10440 ScafM INDEL 0035.scaffold00136 260926 1 . T scaffold10440 ScafM INDEL 0035.scaffold00136 260931 1 T . scaffold10440 ScafM SNP 0035.scaffold00136 260936 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 260951 1 C A scaffold10440 ScafM SNP 0035.scaffold00136 260955 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 260977 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 260991 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261018 1 C T scaffold10440 ScafM INDEL 0035.scaffold00136 261040 1 . C scaffold10440 ScafM SNP 0035.scaffold00136 261048 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 261053 2 CT TC scaffold10440 ScafM SNP 0035.scaffold00136 261075 1 C A scaffold10440 ScafM SNP 0035.scaffold00136 261080 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261092 2 TC AT scaffold10440 ScafM SNP 0035.scaffold00136 261160 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261166 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 261193 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261196 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 261219 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 261244 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261263 1 T C scaffold10440 ScafM INDEL 0035.scaffold00136 261305 8 ACCGAAAC ........ scaffold10440 ScafM INDEL 0035.scaffold00136 261375 4 TTCA .... scaffold10440 ScafM SNP 0035.scaffold00136 261418 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261421 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261430 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261438 1 T C scaffold10440 ScafM INDEL 0035.scaffold00136 261454 20 ATTCAGTTAGTTGAAATCCC .................... scaffold10440 ScafM SNP 0035.scaffold00136 261485 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261494 1 A C scaffold10440 ScafM SNP 0035.scaffold00136 261507 1 A C scaffold10440 ScafM SNP 0035.scaffold00136 261530 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261545 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 261548 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261639 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261646 1 C A scaffold10440 ScafM SNP 0035.scaffold00136 261654 1 G T scaffold10440 Both SNP 0035.scaffold00136 261688 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 261691 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261707 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261709 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 261713 1 T A scaffold10440 ScafM SNP 0035.scaffold00136 261720 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 261731 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 261757 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261785 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 261792 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261804 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 261811 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261830 2 GA AT scaffold10440 Both SNP 0035.scaffold00136 261862 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261876 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 261890 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 261917 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 261923 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 261932 1 A C scaffold10440 ScafM SNP 0035.scaffold00136 261936 1 T G scaffold10440 ScafM INDEL 0035.scaffold00136 261989 3 TTA ... scaffold10440 ScafM INDEL 0035.scaffold00136 261993 2 TT .. scaffold10440 ScafM SNP 0035.scaffold00136 262013 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262043 1 T G scaffold10440 ScafM SNP 0035.scaffold00136 262056 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262062 2 CA TG scaffold10440 ScafM SNP 0035.scaffold00136 262073 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262075 1 G A scaffold10440 ReadM INDEL 0035.scaffold00136 262091 1 . A - ScafM INDEL 0035.scaffold00136 262091 2 TA .. scaffold10440 Both SNP 0035.scaffold00136 262144 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 262161 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 262174 1 C T scaffold10440 ScafM INDEL 0035.scaffold00136 262214 3 TAA ... scaffold10440 ScafM SNP 0035.scaffold00136 262264 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 262339 1 G C scaffold10440 ScafM SNP 0035.scaffold00136 262350 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262359 2 CC AT scaffold10440 ScafM SNP 0035.scaffold00136 262398 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262408 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262417 1 C G scaffold10440 ScafM SNP 0035.scaffold00136 262462 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262471 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262473 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 262485 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262488 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262509 1 A G scaffold10440 ScafM SNP 0035.scaffold00136 262574 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262584 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 262598 1 A T scaffold10440 ScafM SNP 0035.scaffold00136 262603 1 C T scaffold10440 ScafM SNP 0035.scaffold00136 262613 1 G T scaffold10440 ScafM SNP 0035.scaffold00136 262615 1 G A scaffold10440 ScafM SNP 0035.scaffold00136 262625 1 C G scaffold10440 ScafM SNP 0035.scaffold00136 262634 1 T C scaffold10440 ScafM SNP 0035.scaffold00136 262766 1 C T scaffold9264 ScafM INDEL 0035.scaffold00136 262888 50 .................................................. TGCAATTAAAAATTGAAGAGAGAGATAAAGTTGATTCAATAATCTTACCT scaffold9264 ScafM SNP 0035.scaffold00136 263035 1 C A scaffold9264 ScafM SNP 0035.scaffold00136 263509 1 A T scaffold9264 ScafM SNP 0035.scaffold00136 263584 1 A G scaffold9264 ScafM SNP 0035.scaffold00136 263616 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 263618 1 C T scaffold9264 ScafM SNP 0035.scaffold00136 263625 2 CA TT scaffold9264 ScafM INDEL 0035.scaffold00136 263641 3 ... GAT scaffold9264 ScafM SNP 0035.scaffold00136 263718 1 G A scaffold9264 ScafM SNP 0035.scaffold00136 263783 1 T G scaffold9264 ScafM SNP 0035.scaffold00136 263827 1 C A scaffold9264 ScafM SNP 0035.scaffold00136 263879 1 G T scaffold9264 ScafM SNP 0035.scaffold00136 263884 1 G T scaffold9264 ScafM SNP 0035.scaffold00136 263900 1 G T scaffold9264 ScafM INDEL 0035.scaffold00136 265511 2 .. CA scaffold50964 ScafM SNP 0035.scaffold00136 265512 1 G A scaffold50964 ScafM SNP 0035.scaffold00136 265578 1 T A scaffold50964 ScafM INDEL 0035.scaffold00136 265588 2 AA .. scaffold50964 ScafM INDEL 0035.scaffold00136 265616 1 A . scaffold50964 ScafM SNP 0035.scaffold00136 265670 1 T C scaffold50964 ScafM INDEL 0035.scaffold00136 265714 1 . A scaffold50964 ScafM INDEL 0035.scaffold00136 265774 1 . A scaffold50964 ScafM SNP 0035.scaffold00136 265808 1 A C scaffold50964 ScafM SNP 0035.scaffold00136 265810 1 G T scaffold50964 ScafM SNP 0035.scaffold00136 265863 1 G A scaffold50964 ScafM SNP 0035.scaffold00136 265931 1 T C scaffold50964 ScafM SNP 0035.scaffold00136 266024 1 A G scaffold50964 ScafM SNP 0035.scaffold00136 266077 1 G T scaffold50964 ScafM SNP 0035.scaffold00136 266116 1 T A scaffold50964 ScafM SNP 0035.scaffold00136 266817 1 C A scaffold50964 ScafM SNP 0035.scaffold00136 266991 1 G A scaffold50964 ScafM SNP 0035.scaffold00136 267022 1 T A scaffold50964 ScafM SNP 0035.scaffold00136 267252 1 G T scaffold50964 ScafM SNP 0035.scaffold00136 267307 1 C T scaffold50964 ScafM INDEL 0035.scaffold00136 267332 3 CGG ... scaffold50964 ScafM INDEL 0035.scaffold00136 267337 3 TTG ... scaffold50964 ScafM INDEL 0035.scaffold00136 267342 4 CAAT .... scaffold50964 ScafM SNP 0035.scaffold00136 267348 1 T C scaffold50964 ScafM SNP 0035.scaffold00136 267355 1 T C scaffold50964 ScafM SNP 0035.scaffold00136 267362 1 T C scaffold50964 ScafM SNP 0035.scaffold00136 267635 1 C T scaffold50964 ScafM SNP 0035.scaffold00136 267645 1 T C scaffold50964 ScafM SNP 0035.scaffold00136 267654 1 C T scaffold50964 ScafM SNP 0035.scaffold00136 267666 1 A G scaffold50964 ScafM INDEL 0035.scaffold00136 267675 3 ATG ... scaffold50964 ScafM SNP 0035.scaffold00136 267731 1 T G scaffold50964 ScafM SNP 0035.scaffold00136 267766 1 T A scaffold50964 ScafM SNP 0035.scaffold00136 267770 1 T A scaffold50964 ReadM SNP 0035.scaffold00136 269432 1 C T - ScafM SNP 0035.scaffold00136 271496 1 C T scaffold36585 ScafM SNP 0035.scaffold00136 271505 1 A C scaffold36585 ScafM SNP 0035.scaffold00136 271647 1 C A scaffold36585 ReadM SNP 0035.scaffold00136 271920 1 T G - ReadM SNP 0035.scaffold00136 271993 1 T C - ReadM SNP 0035.scaffold00136 272066 1 C T - ReadM SNP 0035.scaffold00136 272263 1 A T - ReadM SNP 0035.scaffold00136 272395 1 T A - ReadM SNP 0035.scaffold00136 272491 1 G C - ReadM SNP 0035.scaffold00136 272565 1 A T - ReadM SNP 0035.scaffold00136 272691 1 A G - ReadM SNP 0035.scaffold00136 272708 1 C A - ReadM SNP 0035.scaffold00136 272977 1 A G - ScafM SNP 0035.scaffold00136 273143 1 C T scaffold36585 Both SNP 0035.scaffold00136 273178 1 C A scaffold36585 Both SNP 0035.scaffold00136 273254 1 C G scaffold36585 Both INDEL 0035.scaffold00136 273279 1 T . scaffold36585 ScafM INDEL 0035.scaffold00136 273325 33 TATTTAAAGACTCTCTCTATCTCATCACTGTTT ................................. scaffold36585 ReadM SNP 0035.scaffold00136 273357 1 T C - Both SNP 0035.scaffold00136 273404 1 T C scaffold36585 ScafM SNP 0035.scaffold00136 273412 1 G A scaffold36585 Both SNP 0035.scaffold00136 273418 1 C T scaffold36585 Both SNP 0035.scaffold00136 273485 1 T G scaffold36585 ScafM INDEL 0035.scaffold00136 273542 3 TTA ... scaffold36585 ScafM SNP 0035.scaffold00136 273615 1 C G scaffold36585 ScafM SNP 0035.scaffold00136 273626 1 G C scaffold36585 ScafM INDEL 0035.scaffold00136 273634 1 A . scaffold36585 ScafM SNP 0035.scaffold00136 273639 2 CT TA scaffold36585 Both INDEL 0035.scaffold00136 273687 1 C . scaffold36585 ScafM SNP 0035.scaffold00136 273739 1 C A scaffold36585 Both SNP 0035.scaffold00136 273880 1 T C scaffold36585 ScafM SNP 0035.scaffold00136 273882 1 G A scaffold36585 ScafM SNP 0035.scaffold00136 273972 1 T A scaffold36585 ScafM INDEL 0035.scaffold00136 274001 1 T . scaffold36585 Both INDEL 0035.scaffold00136 274039 2 AG .. scaffold36585 ReadM SNP 0035.scaffold00136 274077 1 C T - ReadM INDEL 0035.scaffold00136 274089 2 TC .. - ReadM SNP 0035.scaffold00136 274340 1 G A - ReadM INDEL 0035.scaffold00136 274348 1 . T - ReadM SNP 0035.scaffold00136 274440 1 C T - ReadM SNP 0035.scaffold00136 274444 1 A T - ReadM SNP 0035.scaffold00136 274501 1 C T - ReadM SNP 0035.scaffold00136 274592 1 G A - ReadM SNP 0035.scaffold00136 274636 1 A G - ReadM SNP 0035.scaffold00136 274775 1 C T - ReadM SNP 0035.scaffold00136 274784 1 C T - ReadM SNP 0035.scaffold00136 274830 1 T C - ReadM SNP 0035.scaffold00136 275111 1 C T - ScafM SNP 0035.scaffold00136 276638 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 276651 2 CA AC scaffold7590 ScafM SNP 0035.scaffold00136 276670 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276696 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276707 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 276714 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276739 1 G C scaffold7590 ScafM SNP 0035.scaffold00136 276784 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 276796 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276805 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276821 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 276842 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 276853 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 276861 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 276893 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 276908 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 276938 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 276987 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 277003 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277027 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277029 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 277034 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 277048 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 277058 1 A C scaffold7590 ScafM INDEL 0035.scaffold00136 277059 5 ..... TTCTC scaffold7590 ScafM SNP 0035.scaffold00136 277074 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277082 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 277092 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 277101 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 277104 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 277115 1 T C scaffold7590 ScafM INDEL 0035.scaffold00136 277121 3 TAA ... scaffold7590 ScafM SNP 0035.scaffold00136 277126 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 277133 2 CG GA scaffold7590 ScafM SNP 0035.scaffold00136 277157 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 277159 1 G A scaffold7590 ScafM INDEL 0035.scaffold00136 277162 2 .. GG scaffold7590 ScafM SNP 0035.scaffold00136 277164 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 277171 2 TT CA scaffold7590 ScafM SNP 0035.scaffold00136 277175 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277186 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277191 1 G A scaffold7590 ScafM INDEL 0035.scaffold00136 277195 2 AT .. scaffold7590 ScafM SNP 0035.scaffold00136 277205 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 277211 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277541 1 A T scaffold7590 ScafM INDEL 0035.scaffold00136 277544 1 T . scaffold7590 ScafM SNP 0035.scaffold00136 277553 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277558 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 277563 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277580 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 277585 2 CC TA scaffold7590 ScafM SNP 0035.scaffold00136 277594 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 277602 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277604 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 277631 1 G C scaffold7590 ScafM SNP 0035.scaffold00136 277657 1 G T scaffold7590 ScafM SNP 0035.scaffold00136 277675 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 277713 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 285809 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 285848 1 T G scaffold11132 ScafM INDEL 0035.scaffold00136 285913 16 ................ TTTTTTTTTTTTTTTT scaffold11132 ScafM SNP 0035.scaffold00136 285940 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 286063 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 286065 1 C A scaffold11132 ScafM INDEL 0035.scaffold00136 286068 2 TC .. scaffold11132 ScafM SNP 0035.scaffold00136 286113 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 286127 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 286173 1 C G scaffold11132 ScafM SNP 0035.scaffold00136 286187 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 286196 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 286244 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 286351 1 C G scaffold11132 ScafM SNP 0035.scaffold00136 286362 1 G A scaffold11132 ScafM INDEL 0035.scaffold00136 286364 4 GTTA .... scaffold11132 Both SNP 0035.scaffold00136 286471 1 T A scaffold11132 ScafM SNP 0035.scaffold00136 286624 1 G A scaffold11132 Both SNP 0035.scaffold00136 286630 1 T A scaffold11132 Both SNP 0035.scaffold00136 286711 1 C A scaffold11132 Both SNP 0035.scaffold00136 286782 1 C T scaffold11132 Both SNP 0035.scaffold00136 286816 1 A T scaffold11132 ScafM SNP 0035.scaffold00136 286913 1 G A scaffold11132 Both SNP 0035.scaffold00136 287039 1 T G scaffold11132 Both SNP 0035.scaffold00136 287121 1 C G scaffold11132 Both SNP 0035.scaffold00136 287158 1 T C scaffold11132 Both SNP 0035.scaffold00136 287240 1 G A scaffold11132 Both SNP 0035.scaffold00136 287303 1 A G scaffold11132 ReadM SNP 0035.scaffold00136 287423 1 A G - ReadM SNP 0035.scaffold00136 287502 1 T C - ReadM SNP 0035.scaffold00136 287578 1 T A - ReadM SNP 0035.scaffold00136 287616 1 A G - ReadM SNP 0035.scaffold00136 287669 1 G A - ReadM SNP 0035.scaffold00136 287674 1 C T - ReadM SNP 0035.scaffold00136 287755 1 A C - ReadM SNP 0035.scaffold00136 288067 1 A G - ScafM SNP 0035.scaffold00136 288204 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 288214 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 288305 1 C A scaffold11132 ScafM SNP 0035.scaffold00136 288360 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 288524 2 CT AG scaffold11132 ScafM SNP 0035.scaffold00136 288558 1 G C scaffold11132 ScafM SNP 0035.scaffold00136 288587 2 AC GG scaffold11132 ScafM SNP 0035.scaffold00136 288627 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 288756 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 288768 1 T A scaffold11132 ScafM SNP 0035.scaffold00136 288788 1 T C scaffold11132 ScafM SNP 0035.scaffold00136 288806 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 288820 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 288832 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 288872 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 288883 1 G T scaffold11132 ScafM SNP 0035.scaffold00136 288944 1 T C scaffold11132 ReadM SNP 0035.scaffold00136 289048 1 G A - ScafM SNP 0035.scaffold00136 289344 1 C T scaffold11132 ScafM SNP 0035.scaffold00136 289459 1 T G scaffold11132 ScafM SNP 0035.scaffold00136 289472 1 T C scaffold11132 ScafM SNP 0035.scaffold00136 289572 1 A G scaffold11132 ScafM SNP 0035.scaffold00136 289760 1 G A scaffold11132 ScafM SNP 0035.scaffold00136 289802 1 C T scaffold11132 ScafM INDEL 0035.scaffold00136 289805 1 A . scaffold11132 ScafM SNP 0035.scaffold00136 289865 1 T G scaffold11132 ScafM SNP 0035.scaffold00136 290264 1 T A scaffold11132 ReadM SNP 0035.scaffold00136 292168 1 A C - ReadM SNP 0035.scaffold00136 292591 1 G A - ScafM SNP 0035.scaffold00136 292931 1 G T scaffold11132 ScafM SNP 0035.scaffold00136 292997 1 A T scaffold11132 ScafM SNP 0035.scaffold00136 293002 1 A C scaffold11132 ScafM SNP 0035.scaffold00136 293019 1 A G scaffold11132 ReadM SNP 0035.scaffold00136 293249 1 T C - ScafM INDEL 0035.scaffold00136 293678 1 . A scaffold7590 ScafM INDEL 0035.scaffold00136 293738 1 G . scaffold7590 ScafM SNP 0035.scaffold00136 293778 2 TG CT scaffold7590 ScafM SNP 0035.scaffold00136 293799 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 293823 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 293834 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 293840 2 AT GC scaffold7590 ScafM SNP 0035.scaffold00136 293848 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 293856 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 293859 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 293861 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 293873 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 293876 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294444 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294471 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 294475 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 294499 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 294506 2 TC CA scaffold7590 ScafM SNP 0035.scaffold00136 294525 1 C G scaffold7590 ScafM INDEL 0035.scaffold00136 294531 4 .... CCCC scaffold7590 ScafM SNP 0035.scaffold00136 294535 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 294539 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 294541 2 GT TC scaffold7590 ScafM SNP 0035.scaffold00136 294550 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 294559 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 294580 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294585 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294588 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 294594 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 294601 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 294615 2 CA TG scaffold7590 ScafM SNP 0035.scaffold00136 294627 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294633 1 T G scaffold7590 ScafM INDEL 0035.scaffold00136 294640 4 TAGG .... scaffold7590 ScafM SNP 0035.scaffold00136 294645 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294647 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 294649 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 294652 1 G T scaffold7590 ScafM SNP 0035.scaffold00136 294655 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294660 5 TTTGG GCAAA scaffold7590 ScafM INDEL 0035.scaffold00136 294667 1 G . scaffold7590 ScafM INDEL 0035.scaffold00136 294669 1 . G scaffold7590 ScafM INDEL 0035.scaffold00136 294673 1 A . scaffold7590 ScafM INDEL 0035.scaffold00136 294678 4 .... TTGG scaffold7590 ScafM INDEL 0035.scaffold00136 294683 2 .A GT scaffold7590 ScafM SNP 0035.scaffold00136 294688 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294691 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294708 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294739 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 294742 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 294744 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294785 1 A T scaffold7590 ScafM SNP 0035.scaffold00136 294788 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294801 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 294829 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 294836 1 T C scaffold7590 ScafM INDEL 0035.scaffold00136 294840 1 . T scaffold7590 ScafM INDEL 0035.scaffold00136 294852 5 ..... TGAAT scaffold7590 ScafM SNP 0035.scaffold00136 294858 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 294867 1 T G scaffold7590 Both SNP 0035.scaffold00136 295102 1 T C scaffold7590 ReadM SNP 0035.scaffold00136 295194 1 A G - ScafM SNP 0035.scaffold00136 296001 1 A C scaffold61046 ScafM INDEL 0035.scaffold00136 296036 3 ... AAC scaffold61046 ScafM INDEL 0035.scaffold00136 296070 1 A . scaffold61046 ScafM INDEL 0035.scaffold00136 296138 14 TCACAACAAATCTA .............. scaffold61046 ScafM SNP 0035.scaffold00136 296197 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 296238 1 T A scaffold61046 ScafM SNP 0035.scaffold00136 296251 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 296264 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 296442 1 G T scaffold61046 ScafM SNP 0035.scaffold00136 296461 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 296483 1 A G scaffold61046 ScafM SNP 0035.scaffold00136 296486 1 C G scaffold61046 ScafM SNP 0035.scaffold00136 296583 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 296602 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 296672 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 296727 2 GA AT scaffold61046 Both SNP 0035.scaffold00136 296815 1 G T scaffold61046 Both SNP 0035.scaffold00136 296828 1 G A scaffold61046 ReadM SNP 0035.scaffold00136 297222 1 A G - ReadM SNP 0035.scaffold00136 297233 1 A G - ScafM SNP 0035.scaffold00136 297269 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 297327 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 297330 1 C T scaffold61046 ReadM SNP 0035.scaffold00136 297626 1 A G - ReadM SNP 0035.scaffold00136 297699 1 G A - ScafM SNP 0035.scaffold00136 297801 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 297813 1 T G scaffold61046 ScafM SNP 0035.scaffold00136 297933 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 298037 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 298048 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 298132 1 C A scaffold61046 ScafM INDEL 0035.scaffold00136 298160 1 . A scaffold61046 ScafM SNP 0035.scaffold00136 298180 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 298338 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 298344 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 298346 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 298352 1 C A scaffold61046 ScafM SNP 0035.scaffold00136 298676 1 A G scaffold61046 ScafM SNP 0035.scaffold00136 298974 1 G A scaffold61046 ScafM INDEL 0035.scaffold00136 298995 1 T . scaffold61046 ScafM SNP 0035.scaffold00136 299075 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 299084 1 C A scaffold61046 ScafM SNP 0035.scaffold00136 299210 1 C A scaffold61046 ScafM SNP 0035.scaffold00136 299220 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 299264 1 T G scaffold61046 ScafM SNP 0035.scaffold00136 299356 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 299367 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 299856 1 A C scaffold61046 ScafM SNP 0035.scaffold00136 299870 1 A C scaffold61046 ScafM SNP 0035.scaffold00136 299881 1 G C scaffold61046 ScafM SNP 0035.scaffold00136 299887 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 301642 1 T A scaffold61046 ScafM SNP 0035.scaffold00136 301680 1 A G scaffold61046 ScafM INDEL 0035.scaffold00136 301704 1 . T scaffold61046 ScafM SNP 0035.scaffold00136 301709 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 301728 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 301731 1 A T scaffold61046 ScafM SNP 0035.scaffold00136 301734 3 CAA TGG scaffold61046 ScafM SNP 0035.scaffold00136 301742 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301746 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301748 1 G C scaffold61046 ScafM SNP 0035.scaffold00136 301752 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 301773 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301777 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301780 1 A G scaffold61046 ScafM SNP 0035.scaffold00136 301783 1 T C scaffold61046 ScafM SNP 0035.scaffold00136 301793 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 301800 1 T A scaffold61046 ScafM SNP 0035.scaffold00136 301823 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301852 1 A G scaffold61046 ScafM SNP 0035.scaffold00136 301874 1 A G scaffold61046 ScafM SNP 0035.scaffold00136 301903 1 G T scaffold61046 ScafM SNP 0035.scaffold00136 301907 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301910 1 C T scaffold61046 ScafM SNP 0035.scaffold00136 301936 1 G A scaffold61046 ScafM SNP 0035.scaffold00136 302177 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 302209 1 T G scaffold7590 ScafM INDEL 0035.scaffold00136 302244 3 .CC TAA scaffold7590 ScafM SNP 0035.scaffold00136 302252 1 A G scaffold7590 ScafM INDEL 0035.scaffold00136 302259 1 . T scaffold7590 ScafM SNP 0035.scaffold00136 302264 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 302290 1 T A scaffold7590 ScafM INDEL 0035.scaffold00136 302292 1 A . scaffold7590 ScafM SNP 0035.scaffold00136 302311 1 C T scaffold7590 ScafM INDEL 0035.scaffold00136 302315 1 . C scaffold7590 ScafM INDEL 0035.scaffold00136 302316 2 .. AA scaffold7590 ScafM SNP 0035.scaffold00136 302345 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 302370 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 302377 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 302381 1 A G scaffold7590 ScafM INDEL 0035.scaffold00136 302398 2 TG .. scaffold7590 ScafM SNP 0035.scaffold00136 302416 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 302438 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 302441 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 302478 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 302513 1 A T scaffold7590 ScafM INDEL 0035.scaffold00136 302533 8 CGAAGGCA ........ scaffold7590 ScafM SNP 0035.scaffold00136 302552 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 302571 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 302574 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 302576 1 C A scaffold7590 ScafM INDEL 0035.scaffold00136 302621 2 CT .. scaffold7590 ScafM SNP 0035.scaffold00136 302625 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 302701 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 302715 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 302718 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 302721 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 302816 1 A G scaffold7590 Both SNP 0035.scaffold00136 302844 1 C T scaffold7590 Both SNP 0035.scaffold00136 302938 1 T G scaffold7590 Both SNP 0035.scaffold00136 303202 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 303241 1 C T scaffold7590 Both SNP 0035.scaffold00136 303275 1 T C scaffold7590 ScafM INDEL 0035.scaffold00136 303321 2 .. AT scaffold7590 Both SNP 0035.scaffold00136 303465 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 303520 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 303533 1 G C scaffold7590 ScafM INDEL 0035.scaffold00136 303535 4 CTTC .... scaffold7590 ScafM INDEL 0035.scaffold00136 303556 1 . T scaffold7590 Both SNP 0035.scaffold00136 303650 1 C G scaffold7590 Both SNP 0035.scaffold00136 303727 1 A G scaffold7590 Both SNP 0035.scaffold00136 303743 1 T A scaffold7590 Both INDEL 0035.scaffold00136 303839 1 A . scaffold7590 ScafM SNP 0035.scaffold00136 303860 1 A G scaffold7590 Both SNP 0035.scaffold00136 303929 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 303934 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 303970 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 303977 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 304206 1 G A scaffold7590 Both INDEL 0035.scaffold00136 304249 1 A . scaffold7590 ScafM SNP 0035.scaffold00136 304308 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 304333 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 304388 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 304407 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 304411 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 304431 2 GC AA scaffold7590 ScafM SNP 0035.scaffold00136 304491 1 C A scaffold7590 ScafM INDEL 0035.scaffold00136 304639 15 AAGGGAATAGAACCT ............... scaffold7590 ScafM INDEL 0035.scaffold00136 304657 1 G . scaffold7590 ScafM INDEL 0035.scaffold00136 304661 1 C . scaffold7590 ScafM SNP 0035.scaffold00136 304664 1 A T scaffold7590 ScafM INDEL 0035.scaffold00136 304669 4 TTAT .... scaffold7590 ScafM INDEL 0035.scaffold00136 304676 2 AA .. scaffold7590 ScafM SNP 0035.scaffold00136 304683 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 304692 1 G C scaffold7590 ScafM INDEL 0035.scaffold00136 304695 7 ....... CTCCCCT scaffold7590 ScafM INDEL 0035.scaffold00136 304743 1 . C scaffold7590 ScafM SNP 0035.scaffold00136 304751 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 304863 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 304949 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 304957 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 304963 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 305004 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 305024 1 C A scaffold7590 ScafM INDEL 0035.scaffold00136 305048 5 GGCCC ....A scaffold7590 ScafM SNP 0035.scaffold00136 305065 1 G C scaffold7590 ScafM INDEL 0035.scaffold00136 305080 1 . C scaffold7590 ScafM SNP 0035.scaffold00136 305085 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 305097 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 305105 1 C T scaffold7590 ScafM INDEL 0035.scaffold00136 305168 2 AA .. scaffold7590 ScafM INDEL 0035.scaffold00136 305174 1 T . scaffold7590 ScafM SNP 0035.scaffold00136 305177 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 305184 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 305211 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 305241 1 C A scaffold7590 ScafM INDEL 0035.scaffold00136 305270 3 TTG ... scaffold7590 ReadM SNP 0035.scaffold00136 305337 1 G C - ReadM SNP 0035.scaffold00136 305413 1 A G - ScafM SNP 0035.scaffold00136 305685 1 T C scaffold71780 Both SNP 0035.scaffold00136 305745 1 T C scaffold71780 Both INDEL 0035.scaffold00136 305823 1 T . scaffold71780 ScafM SNP 0035.scaffold00136 305828 1 C A scaffold71780 ScafM SNP 0035.scaffold00136 305835 1 A C scaffold71780 ReadM SNP 0035.scaffold00136 306150 1 G A - ReadM INDEL 0035.scaffold00136 306168 1 A . - ReadM SNP 0035.scaffold00136 306303 1 T A - ScafM SNP 0035.scaffold00136 306380 1 G A scaffold7590 ScafM INDEL 0035.scaffold00136 306439 1 . A scaffold7590 ScafM SNP 0035.scaffold00136 306445 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 306449 1 A G scaffold7590 Both SNP 0035.scaffold00136 306475 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 306484 1 G A scaffold7590 ScafM INDEL 0035.scaffold00136 306563 1 T . scaffold7590 ScafM SNP 0035.scaffold00136 306566 1 G T scaffold7590 ScafM SNP 0035.scaffold00136 306569 1 C G scaffold7590 ScafM SNP 0035.scaffold00136 306572 1 G C scaffold7590 Both SNP 0035.scaffold00136 306645 1 G A scaffold7590 Both SNP 0035.scaffold00136 306651 1 C T scaffold7590 ScafM INDEL 0035.scaffold00136 306675 1 A . scaffold7590 ScafM SNP 0035.scaffold00136 306703 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 306705 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 306746 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 306781 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 306806 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 306830 1 T G scaffold7590 Both SNP 0035.scaffold00136 306956 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 306984 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 307033 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 307045 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 307047 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 307103 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 307111 3 CAA GTG scaffold7590 Both SNP 0035.scaffold00136 307152 1 C A scaffold7590 Both SNP 0035.scaffold00136 307179 1 G A scaffold7590 Both SNP 0035.scaffold00136 307190 1 T C scaffold7590 ScafM INDEL 0035.scaffold00136 307260 1 . T scaffold7590 ScafM SNP 0035.scaffold00136 307262 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 307275 1 A G scaffold7590 ScafM SNP 0035.scaffold00136 307290 1 T G scaffold7590 ScafM INDEL 0035.scaffold00136 307295 1 . T scaffold7590 ScafM SNP 0035.scaffold00136 307300 1 A G scaffold7590 ScafM INDEL 0035.scaffold00136 307310 1 . A scaffold7590 ScafM SNP 0035.scaffold00136 307339 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 307344 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 307360 1 T G scaffold7590 ScafM SNP 0035.scaffold00136 307409 1 A G scaffold7590 Both SNP 0035.scaffold00136 307412 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 307487 2 CT GA scaffold7590 ScafM SNP 0035.scaffold00136 307527 1 T C scaffold7590 ScafM SNP 0035.scaffold00136 307532 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 307542 1 G A scaffold7590 ScafM SNP 0035.scaffold00136 307554 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 307568 1 G T scaffold7590 ScafM SNP 0035.scaffold00136 307596 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 307640 1 T A scaffold7590 ScafM SNP 0035.scaffold00136 307646 1 C T scaffold7590 ScafM SNP 0035.scaffold00136 307660 1 T C scaffold7590 Both SNP 0035.scaffold00136 307700 1 A C scaffold7590 ScafM SNP 0035.scaffold00136 307777 2 AT GC scaffold7590 ReadM SNP 0035.scaffold00136 307778 1 T C - ScafM SNP 0035.scaffold00136 307802 1 C A scaffold7590 ScafM SNP 0035.scaffold00136 307840 1 G A scaffold7590 ReadM SNP 0035.scaffold00136 308013 1 A G - ReadM SNP 0035.scaffold00136 308193 1 T G - ReadM SNP 0035.scaffold00136 308379 1 T C - ReadM SNP 0035.scaffold00136 308467 1 A G - ScafM SNP 0035.scaffold00136 308736 1 T G C19648241 ScafM SNP 0035.scaffold00136 308746 1 A T C19648241 ScafM INDEL 0035.scaffold00136 308829 19 ................... CGACACTGCCCAGAACCAA C19648241 ScafM INDEL 0035.scaffold00136 308832 1 . C C19648241 ScafM INDEL 0035.scaffold00136 308852 1 . C C19648241 Both SNP 0035.scaffold00136 308878 1 G A C19648241 Both SNP 0035.scaffold00136 308947 1 G A C19648241 Both SNP 0035.scaffold00136 309027 1 A G C19648241 Both SNP 0035.scaffold00136 309052 1 T A C19648241 ScafM SNP 0035.scaffold00136 309064 1 A G C19648241 Both SNP 0035.scaffold00136 309144 1 A G C19648241 ReadM SNP 0035.scaffold00136 309262 1 T C - ReadM INDEL 0035.scaffold00136 309273 1 . G - Both SNP 0035.scaffold00136 309564 1 C T C19648241 ReadM SNP 0035.scaffold00136 309664 1 G C - ReadM SNP 0035.scaffold00136 309836 1 G A - ReadM SNP 0035.scaffold00136 310015 1 T C - ReadM SNP 0035.scaffold00136 310140 1 C T - ReadM SNP 0035.scaffold00136 310406 1 G A - ScafM INDEL 0035.scaffold00136 311800 3 GAA ... scaffold12066 ScafM SNP 0035.scaffold00136 311819 1 G A scaffold12066 ScafM INDEL 0035.scaffold00136 311829 1 . A scaffold12066 ScafM SNP 0035.scaffold00136 311831 1 C A scaffold12066 ScafM INDEL 0035.scaffold00136 311841 1 . T scaffold12066 ScafM INDEL 0035.scaffold00136 311844 1 T . scaffold12066 ScafM SNP 0035.scaffold00136 311856 1 T C scaffold12066 ScafM SNP 0035.scaffold00136 311937 1 C G scaffold12066 ScafM SNP 0035.scaffold00136 312482 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 312487 1 T C scaffold12066 ScafM SNP 0035.scaffold00136 312503 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 312506 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 312516 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 312566 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 312572 1 T A scaffold12066 ScafM INDEL 0035.scaffold00136 312590 4 CTAC .... scaffold12066 ScafM SNP 0035.scaffold00136 312596 1 G T scaffold12066 ScafM INDEL 0035.scaffold00136 312599 2 TC .. scaffold12066 ScafM SNP 0035.scaffold00136 312783 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 312788 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 312797 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 312844 1 G A scaffold12066 ScafM INDEL 0035.scaffold00136 312850 1 A . scaffold12066 ReadM SNP 0035.scaffold00136 312879 1 A G - ReadM SNP 0035.scaffold00136 312934 1 A G - ReadM SNP 0035.scaffold00136 313144 1 T C - ScafM SNP 0035.scaffold00136 313292 1 C G scaffold12066 ScafM INDEL 0035.scaffold00136 313301 35 TTCGAATAATACTTTTCTACTAGAAAGCAAATCTT ................................... scaffold12066 Both SNP 0035.scaffold00136 313375 1 C A scaffold12066 Both SNP 0035.scaffold00136 313391 1 T C scaffold12066 ScafM SNP 0035.scaffold00136 313449 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 313457 1 C G scaffold12066 ScafM SNP 0035.scaffold00136 313459 1 A T scaffold12066 ScafM SNP 0035.scaffold00136 313477 1 T A scaffold12066 ScafM SNP 0035.scaffold00136 313488 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 313522 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 313551 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 313569 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 313598 1 A T scaffold12066 ScafM SNP 0035.scaffold00136 313625 1 A C scaffold12066 Both SNP 0035.scaffold00136 313700 1 G A scaffold12066 ScafM INDEL 0035.scaffold00136 313760 4 .... AAAT scaffold12066 ScafM SNP 0035.scaffold00136 313881 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 313907 2 GA TG scaffold12066 ScafM INDEL 0035.scaffold00136 313921 1 . C scaffold12066 ScafM SNP 0035.scaffold00136 313926 1 T A scaffold12066 ScafM SNP 0035.scaffold00136 314071 1 A T scaffold12066 Both SNP 0035.scaffold00136 314113 1 C G scaffold12066 Both SNP 0035.scaffold00136 314154 1 G A scaffold12066 Both SNP 0035.scaffold00136 314173 1 A G scaffold12066 Both SNP 0035.scaffold00136 314206 1 A G scaffold12066 Both SNP 0035.scaffold00136 314283 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 314343 1 G T scaffold12066 Both SNP 0035.scaffold00136 314349 1 G A scaffold12066 Both SNP 0035.scaffold00136 314367 1 C T scaffold12066 Both SNP 0035.scaffold00136 314393 1 G A scaffold12066 Both SNP 0035.scaffold00136 314437 1 T A scaffold12066 Both INDEL 0035.scaffold00136 314523 2 TA .. scaffold12066 ScafM SNP 0035.scaffold00136 314563 1 A T scaffold12066 ScafM INDEL 0035.scaffold00136 314567 2 .A GC scaffold12066 ScafM INDEL 0035.scaffold00136 314583 1 C . scaffold12066 ReadM SNP 0035.scaffold00136 314686 1 T G - ReadM SNP 0035.scaffold00136 314748 1 G A - ReadM INDEL 0035.scaffold00136 314843 1 C . - ReadM SNP 0035.scaffold00136 315006 1 G A - ReadM SNP 0035.scaffold00136 315015 1 A C - ReadM SNP 0035.scaffold00136 315103 1 A G - ReadM SNP 0035.scaffold00136 315394 1 C A - ReadM SNP 0035.scaffold00136 315421 1 A C - Both SNP 0035.scaffold00136 315595 1 C A scaffold12066 Both SNP 0035.scaffold00136 315610 1 A G scaffold12066 Both SNP 0035.scaffold00136 315636 1 A G scaffold12066 ReadM INDEL 0035.scaffold00136 315731 2 .. TT - ScafM SNP 0035.scaffold00136 315808 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 315843 2 AT TC scaffold12066 Both SNP 0035.scaffold00136 315925 1 C T scaffold12066 ReadM SNP 0035.scaffold00136 316417 2 AA CT - ReadM SNP 0035.scaffold00136 316478 1 C T - ReadM SNP 0035.scaffold00136 316505 1 T G - ReadM SNP 0035.scaffold00136 316508 1 T C - ReadM SNP 0035.scaffold00136 316538 1 A G - ReadM INDEL 0035.scaffold00136 319737 1 . G - ReadM SNP 0035.scaffold00136 319810 1 G A - ReadM SNP 0035.scaffold00136 320179 1 C G - ReadM SNP 0035.scaffold00136 320479 1 A T - ReadM SNP 0035.scaffold00136 320594 1 A T - Both SNP 0035.scaffold00136 320616 1 T G scaffold12066 ReadM SNP 0035.scaffold00136 320695 1 A G - ReadM SNP 0035.scaffold00136 321087 1 A G - ReadM SNP 0035.scaffold00136 321094 1 A C - ScafM SNP 0035.scaffold00136 321255 1 C T scaffold12066 ScafM SNP 0035.scaffold00136 321274 1 G A scaffold12066 ScafM INDEL 0035.scaffold00136 321309 1 . A scaffold12066 ScafM INDEL 0035.scaffold00136 321409 2 .. GA scaffold12066 ScafM SNP 0035.scaffold00136 321505 1 G A scaffold12066 ScafM SNP 0035.scaffold00136 321513 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 321551 1 T G scaffold12066 ScafM SNP 0035.scaffold00136 321570 1 T C scaffold12066 ScafM SNP 0035.scaffold00136 323397 1 G A scaffold61838 ScafM SNP 0035.scaffold00136 323635 1 T C scaffold61838 ScafM SNP 0035.scaffold00136 323647 1 T A scaffold61838 ScafM INDEL 0035.scaffold00136 323659 1 A . scaffold61838 ScafM SNP 0035.scaffold00136 323676 1 G A scaffold61838 ScafM SNP 0035.scaffold00136 323709 1 C T scaffold61838 ScafM SNP 0035.scaffold00136 323794 1 G T scaffold61838 ScafM SNP 0035.scaffold00136 323824 1 T G scaffold61838 Both SNP 0035.scaffold00136 323855 1 T C scaffold61838 Both SNP 0035.scaffold00136 323896 1 T C scaffold61838 ScafM SNP 0035.scaffold00136 323961 1 C T scaffold61838 Both INDEL 0035.scaffold00136 323963 1 . A scaffold61838 Both SNP 0035.scaffold00136 323978 1 A G scaffold61838 ScafM INDEL 0035.scaffold00136 324023 1 T . scaffold61838 Both SNP 0035.scaffold00136 324043 1 A G scaffold61838 ScafM SNP 0035.scaffold00136 324060 1 T G scaffold61838 Both SNP 0035.scaffold00136 324090 1 T G scaffold61838 ReadM SNP 0035.scaffold00136 324346 1 T C - ReadM SNP 0035.scaffold00136 324379 1 C T - ReadM SNP 0035.scaffold00136 324447 1 T C - ReadM SNP 0035.scaffold00136 324495 1 T C - ReadM SNP 0035.scaffold00136 324562 1 G T - ReadM SNP 0035.scaffold00136 324710 1 C G - ReadM SNP 0035.scaffold00136 324726 1 T G - ReadM SNP 0035.scaffold00136 325322 1 A T - ReadM SNP 0035.scaffold00136 325397 1 A C - ReadM SNP 0035.scaffold00136 325443 1 A G - ReadM SNP 0035.scaffold00136 325651 1 C T - ReadM SNP 0035.scaffold00136 325734 2 TT CA - ReadM SNP 0035.scaffold00136 325805 1 T G - ReadM SNP 0035.scaffold00136 325833 1 A G - ReadM SNP 0035.scaffold00136 325865 1 A G - Both SNP 0035.scaffold00136 325931 1 C G scaffold12066 Both SNP 0035.scaffold00136 325997 1 C T scaffold12066 Both SNP 0035.scaffold00136 326038 2 AA GG scaffold12066 Both SNP 0035.scaffold00136 326099 1 A G scaffold12066 ScafM SNP 0035.scaffold00136 326117 1 T C scaffold12066 ReadM SNP 0035.scaffold00136 326245 1 C T - ReadM SNP 0035.scaffold00136 326251 1 C T - ReadM SNP 0035.scaffold00136 326598 1 T C - ReadM SNP 0035.scaffold00136 326622 1 T A - ReadM SNP 0035.scaffold00136 326650 1 T C - ReadM SNP 0035.scaffold00136 326778 1 G T - ReadM SNP 0035.scaffold00136 326876 1 T C - ReadM SNP 0035.scaffold00136 326938 1 A G - ReadM SNP 0035.scaffold00136 326965 1 A G - ReadM SNP 0035.scaffold00136 327266 1 C A - ReadM SNP 0035.scaffold00136 327354 1 A T - ReadM INDEL 0035.scaffold00136 327375 2 .. GT - ReadM SNP 0035.scaffold00136 328654 1 C T - ReadM SNP 0035.scaffold00136 328665 1 T G - ReadM SNP 0035.scaffold00136 328751 1 A G - ReadM SNP 0035.scaffold00136 328880 1 A G - ReadM INDEL 0035.scaffold00136 329096 1 . T - ReadM SNP 0035.scaffold00136 329120 1 C T - ReadM SNP 0035.scaffold00136 329235 1 G A - ReadM SNP 0035.scaffold00136 329355 1 A G - ReadM SNP 0035.scaffold00136 329379 1 A G - ReadM SNP 0035.scaffold00136 329578 1 A G - ReadM SNP 0035.scaffold00136 329827 1 C T - ReadM SNP 0035.scaffold00136 329875 1 C T - ReadM SNP 0035.scaffold00136 329910 1 T A - ReadM SNP 0035.scaffold00136 329946 1 T C - ReadM INDEL 0035.scaffold00136 329965 1 . A - ReadM SNP 0035.scaffold00136 329992 1 T G - ReadM SNP 0035.scaffold00136 330020 1 G T - ReadM SNP 0035.scaffold00136 330159 1 A G - ReadM SNP 0035.scaffold00136 330542 1 C T - ReadM SNP 0035.scaffold00136 330581 1 A G - ReadM SNP 0035.scaffold00136 330648 1 C A - ReadM SNP 0035.scaffold00136 330746 1 T G - Both SNP 0035.scaffold00136 330839 1 T G scaffold46786 Both SNP 0035.scaffold00136 330851 1 C T scaffold46786 ScafM SNP 0035.scaffold00136 330879 1 G A scaffold46786 ScafM INDEL 0035.scaffold00136 330880 3 ... AAT scaffold46786 ScafM SNP 0035.scaffold00136 330884 1 T A scaffold46786 ScafM SNP 0035.scaffold00136 331060 1 G C scaffold46786 Both SNP 0035.scaffold00136 331087 1 A G scaffold46786 Both SNP 0035.scaffold00136 331089 1 A G scaffold46786 ScafM SNP 0035.scaffold00136 331131 1 G T scaffold46786 ScafM SNP 0035.scaffold00136 331243 1 C A scaffold46786 ScafM SNP 0035.scaffold00136 331248 1 G A scaffold46786 Both SNP 0035.scaffold00136 331298 1 A G scaffold46786 Both SNP 0035.scaffold00136 331361 1 A C scaffold46786 ReadM SNP 0035.scaffold00136 331414 1 A G - ScafM SNP 0035.scaffold00136 331431 1 A G scaffold46786 Both SNP 0035.scaffold00136 331449 1 C T scaffold46786 Both SNP 0035.scaffold00136 331488 1 T C scaffold46786 Both SNP 0035.scaffold00136 331534 1 A G scaffold46786 Both INDEL 0035.scaffold00136 331540 1 . A scaffold46786 ReadM SNP 0035.scaffold00136 331776 1 G A - ReadM SNP 0035.scaffold00136 331824 1 C A - ReadM SNP 0035.scaffold00136 331860 1 C T - ReadM SNP 0035.scaffold00136 332052 1 A G - ReadM SNP 0035.scaffold00136 332134 1 T C - ReadM SNP 0035.scaffold00136 332224 1 C A - ReadM SNP 0035.scaffold00136 332339 1 T G - ReadM SNP 0035.scaffold00136 332430 1 C T - ReadM SNP 0035.scaffold00136 332551 1 G A - ReadM SNP 0035.scaffold00136 343663 1 G T - ReadM SNP 0035.scaffold00136 343740 1 G A - ReadM SNP 0035.scaffold00136 343826 1 T A - ReadM INDEL 0035.scaffold00136 343848 1 T . - ReadM SNP 0035.scaffold00136 343973 1 A G - ReadM SNP 0035.scaffold00136 344075 1 G A - ReadM SNP 0035.scaffold00136 344543 1 A C - ReadM SNP 0035.scaffold00136 344624 1 A G - ReadM SNP 0035.scaffold00136 344673 1 A G - ReadM SNP 0035.scaffold00136 344688 1 T C - ReadM SNP 0035.scaffold00136 344775 1 A G - ReadM SNP 0035.scaffold00136 344792 1 A G - ReadM SNP 0035.scaffold00136 344912 1 C T - ReadM INDEL 0035.scaffold00136 345297 1 . A - ReadM SNP 0035.scaffold00136 345323 1 G A - ReadM SNP 0035.scaffold00136 345358 1 C G - ReadM SNP 0035.scaffold00136 345424 1 C T - ReadM SNP 0035.scaffold00136 345723 1 G A - ReadM SNP 0035.scaffold00136 345858 1 A G - ReadM SNP 0035.scaffold00136 346274 1 A C - ReadM SNP 0035.scaffold00136 346318 1 G A - Both INDEL 0035.scaffold00136 346366 2 .. TT scaffold26526 ReadM SNP 0035.scaffold00136 346455 1 C T - ReadM SNP 0035.scaffold00136 346485 1 A G - ReadM SNP 0035.scaffold00136 346973 1 A G - ReadM SNP 0035.scaffold00136 347154 1 A G - ReadM SNP 0035.scaffold00136 347216 1 A G - ReadM SNP 0035.scaffold00136 347227 1 C A - ReadM INDEL 0035.scaffold00136 347306 1 A . - Both SNP 0035.scaffold00136 347325 1 A G scaffold26526 Both SNP 0035.scaffold00136 347347 1 T A scaffold26526 Both SNP 0035.scaffold00136 347375 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 347479 1 T A scaffold26526 Both SNP 0035.scaffold00136 347484 1 C T scaffold26526 ScafM SNP 0035.scaffold00136 347495 1 G A scaffold26526 Both SNP 0035.scaffold00136 347596 1 T C scaffold26526 ScafM SNP 0035.scaffold00136 347854 1 G A scaffold26526 Both SNP 0035.scaffold00136 347928 2 CC TG scaffold26526 Both SNP 0035.scaffold00136 347991 1 C T scaffold26526 Both SNP 0035.scaffold00136 348092 1 T C scaffold26526 ScafM SNP 0035.scaffold00136 348099 1 T C scaffold26526 Both SNP 0035.scaffold00136 348205 1 T C scaffold26526 ScafM SNP 0035.scaffold00136 348260 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 348269 1 C T scaffold26526 ScafM SNP 0035.scaffold00136 348273 1 T C scaffold26526 Both SNP 0035.scaffold00136 348392 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 348452 1 C A scaffold26526 Both SNP 0035.scaffold00136 348507 1 G A scaffold26526 Both SNP 0035.scaffold00136 348516 1 T C scaffold26526 Both SNP 0035.scaffold00136 348539 1 C T scaffold26526 Both SNP 0035.scaffold00136 348611 1 C T scaffold26526 Both SNP 0035.scaffold00136 349092 1 A T scaffold26526 Both SNP 0035.scaffold00136 349380 1 A T scaffold26526 ScafM SNP 0035.scaffold00136 349574 1 C T scaffold26526 ScafM SNP 0035.scaffold00136 349596 1 G A scaffold26526 ScafM SNP 0035.scaffold00136 349634 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 349646 1 A T scaffold26526 ScafM SNP 0035.scaffold00136 349673 1 C G scaffold26526 Both SNP 0035.scaffold00136 349779 1 A C scaffold26526 Both SNP 0035.scaffold00136 349829 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 349848 1 A G scaffold26526 Both SNP 0035.scaffold00136 349888 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 349913 1 T A scaffold26526 Both SNP 0035.scaffold00136 349961 1 G A scaffold26526 ReadM SNP 0035.scaffold00136 350052 1 G A - ReadM INDEL 0035.scaffold00136 350079 1 . A - ScafM SNP 0035.scaffold00136 351031 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 351065 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 351083 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 351140 1 G A scaffold26526 ScafM SNP 0035.scaffold00136 351167 1 A C scaffold26526 ScafM SNP 0035.scaffold00136 351349 1 A T scaffold26526 ScafM SNP 0035.scaffold00136 351363 1 C T scaffold26526 ScafM SNP 0035.scaffold00136 351377 1 A T scaffold26526 ScafM SNP 0035.scaffold00136 351442 1 G A scaffold26526 ScafM SNP 0035.scaffold00136 351463 1 A G scaffold26526 ScafM INDEL 0035.scaffold00136 351500 13 TCTTTGTTTTCTT ............. scaffold26526 ScafM SNP 0035.scaffold00136 351527 1 A C scaffold26526 ScafM SNP 0035.scaffold00136 351531 1 G A scaffold26526 ScafM SNP 0035.scaffold00136 351567 1 G C scaffold26526 ScafM SNP 0035.scaffold00136 351573 1 T C scaffold26526 ScafM SNP 0035.scaffold00136 351577 1 A G scaffold26526 ScafM SNP 0035.scaffold00136 351603 1 A T scaffold26526 ReadM SNP 0035.scaffold00136 351677 1 A G - ReadM INDEL 0035.scaffold00136 351700 1 A . - ReadM SNP 0035.scaffold00136 351796 1 T C - ReadM SNP 0035.scaffold00136 351807 1 T C - ScafM INDEL 0035.scaffold00136 356517 3 TGT ... scaffold74979 ScafM SNP 0035.scaffold00136 356628 1 C T scaffold74979 ScafM INDEL 0035.scaffold00136 356715 7 ATAGAGA ....... scaffold74979 ScafM INDEL 0035.scaffold00136 356777 1 . T scaffold74979 ScafM SNP 0035.scaffold00136 356783 1 A C scaffold74979 ScafM SNP 0035.scaffold00136 356788 1 G A scaffold74979 ScafM SNP 0035.scaffold00136 356950 1 G A scaffold74979 ReadM INDEL 0035.scaffold00136 357018 1 . A - ReadM SNP 0035.scaffold00136 357074 1 T C - ReadM INDEL 0035.scaffold00136 357111 1 . T - ReadM SNP 0035.scaffold00136 357163 1 A C - ReadM SNP 0035.scaffold00136 357234 1 C T - ReadM SNP 0035.scaffold00136 357238 1 G A - ReadM INDEL 0035.scaffold00136 357431 2 GC .. - ReadM SNP 0035.scaffold00136 357691 1 T C - ReadM INDEL 0035.scaffold00136 357803 1 A . - Both SNP 0035.scaffold00136 357841 1 G A scaffold74979 Both SNP 0035.scaffold00136 357922 1 C A scaffold74979 Both SNP 0035.scaffold00136 357933 1 A G scaffold74979 Both SNP 0035.scaffold00136 357946 1 A C scaffold74979 ReadM SNP 0035.scaffold00136 358298 1 T C - ReadM SNP 0035.scaffold00136 358469 1 T C - ReadM SNP 0035.scaffold00136 358601 1 T C - ScafM SNP 0035.scaffold00136 358953 1 A G scaffold28895 ScafM SNP 0035.scaffold00136 359070 1 C G scaffold28895 ScafM INDEL 0035.scaffold00136 359900 1 . A scaffold57992 ScafM SNP 0035.scaffold00136 359911 1 A C scaffold57992 ScafM SNP 0035.scaffold00136 359950 1 A G scaffold57992 ScafM SNP 0035.scaffold00136 361032 1 G A scaffold3156 ScafM SNP 0035.scaffold00136 361059 1 A G scaffold3156 ScafM SNP 0035.scaffold00136 361178 1 G T scaffold3156 ScafM SNP 0035.scaffold00136 361185 1 A G scaffold3156 ScafM SNP 0035.scaffold00136 361200 1 A G scaffold3156 ScafM SNP 0035.scaffold00136 361223 1 C A scaffold3156 ScafM INDEL 0035.scaffold00136 361299 1 . T scaffold3156 ScafM SNP 0035.scaffold00136 361466 1 C T scaffold3156 Both SNP 0035.scaffold00136 361490 1 A G scaffold3156 Both SNP 0035.scaffold00136 361531 1 T G scaffold3156 ScafM INDEL 0035.scaffold00136 361594 1 A . scaffold3156 ScafM SNP 0035.scaffold00136 361613 1 A T scaffold3156 ScafM SNP 0035.scaffold00136 361641 1 T C scaffold3156 ScafM INDEL 0035.scaffold00136 361646 7 TTATAAA ....... scaffold3156 ScafM SNP 0035.scaffold00136 361668 1 C T scaffold3156 ScafM SNP 0035.scaffold00136 361671 1 G T scaffold3156 ScafM SNP 0035.scaffold00136 361693 1 A G scaffold3156 ScafM SNP 0035.scaffold00136 361704 1 A G scaffold3156 ScafM SNP 0035.scaffold00136 361814 1 G A scaffold3156 Both SNP 0035.scaffold00136 361905 1 A G scaffold3156 Both SNP 0035.scaffold00136 361916 1 A T scaffold3156 ScafM INDEL 0035.scaffold00136 362148 7 ....... AATTCCT scaffold3156 ReadM SNP 0035.scaffold00136 362223 1 T G - ReadM SNP 0035.scaffold00136 362253 1 T C - ReadM SNP 0035.scaffold00136 362285 1 G A - ReadM SNP 0035.scaffold00136 362289 1 A G - ReadM INDEL 0035.scaffold00136 362355 1 C . - ReadM SNP 0035.scaffold00136 362498 1 A T - ReadM SNP 0035.scaffold00136 362533 1 G A - ReadM SNP 0035.scaffold00136 362700 1 T A - ReadM SNP 0035.scaffold00136 362731 1 T C - ReadM SNP 0035.scaffold00136 362777 1 A G - ReadM SNP 0035.scaffold00136 362914 1 T C - ReadM SNP 0035.scaffold00136 363022 1 A G - ReadM SNP 0035.scaffold00136 363139 1 G C - ReadM SNP 0035.scaffold00136 363180 1 T C - ReadM SNP 0035.scaffold00136 363384 1 A G - ReadM SNP 0035.scaffold00136 363431 1 A T - ReadM SNP 0035.scaffold00136 363459 1 G C - ReadM SNP 0035.scaffold00136 363570 1 A G - ReadM SNP 0035.scaffold00136 363624 1 T C - ReadM SNP 0035.scaffold00136 364395 1 G A - ReadM SNP 0035.scaffold00136 364398 1 G A - ReadM SNP 0035.scaffold00136 364456 1 G A - ReadM SNP 0035.scaffold00136 364485 1 T A - ReadM SNP 0035.scaffold00136 364550 1 T C - ReadM SNP 0035.scaffold00136 364657 1 C T - ReadM SNP 0035.scaffold00136 364718 1 C A - ReadM SNP 0035.scaffold00136 364738 1 C T - ReadM SNP 0035.scaffold00136 364752 1 T C - ReadM INDEL 0035.scaffold00136 364840 1 C . - ReadM INDEL 0035.scaffold00136 364888 1 . A - ReadM SNP 0035.scaffold00136 364928 1 C T - ReadM SNP 0035.scaffold00136 364945 1 T A - ReadM SNP 0035.scaffold00136 364991 1 C A - ReadM SNP 0035.scaffold00136 365178 1 G A - ReadM SNP 0035.scaffold00136 365187 1 G A - ReadM SNP 0035.scaffold00136 365192 1 A G - ReadM SNP 0035.scaffold00136 365274 1 C A - ReadM SNP 0035.scaffold00136 365350 1 A T - ReadM SNP 0035.scaffold00136 365705 1 T C - ReadM SNP 0035.scaffold00136 365842 1 T C - ReadM SNP 0035.scaffold00136 365949 1 G A - ReadM SNP 0035.scaffold00136 366185 1 T C - ReadM SNP 0035.scaffold00136 366274 1 A G - ReadM SNP 0035.scaffold00136 366328 1 C G - ReadM SNP 0035.scaffold00136 366454 1 G A - ReadM SNP 0035.scaffold00136 369271 1 T A - ReadM SNP 0035.scaffold00136 369288 1 G A - ReadM SNP 0035.scaffold00136 369587 1 C T - ReadM SNP 0035.scaffold00136 369656 1 A G - ReadM SNP 0035.scaffold00136 369679 1 A G - ReadM SNP 0035.scaffold00136 369722 1 A G - ReadM SNP 0035.scaffold00136 369743 1 G A - ReadM SNP 0035.scaffold00136 369748 1 G A - ReadM SNP 0035.scaffold00136 369818 1 G A - ReadM SNP 0035.scaffold00136 369894 1 C T - ReadM SNP 0035.scaffold00136 369946 1 T C - ReadM SNP 0035.scaffold00136 370025 1 C T - ReadM SNP 0035.scaffold00136 370034 1 G A - ReadM SNP 0035.scaffold00136 370322 1 G T - ReadM SNP 0035.scaffold00136 370497 1 C G - ReadM SNP 0035.scaffold00136 370520 1 C G - ReadM SNP 0035.scaffold00136 370746 1 G C - ReadM SNP 0035.scaffold00136 370753 1 C T - ReadM SNP 0035.scaffold00136 371064 1 C A - ReadM SNP 0035.scaffold00136 371173 1 T G - ReadM SNP 0035.scaffold00136 371250 1 C T - ReadM SNP 0035.scaffold00136 371310 1 G A - ReadM SNP 0035.scaffold00136 371476 1 A G - ReadM SNP 0035.scaffold00136 371495 1 T C - ReadM INDEL 0035.scaffold00136 371647 1 . C - ReadM SNP 0035.scaffold00136 371690 1 A G - ReadM SNP 0035.scaffold00136 371769 1 A T - ReadM SNP 0035.scaffold00136 371930 1 A G - ReadM SNP 0035.scaffold00136 371938 1 A C - ReadM SNP 0035.scaffold00136 372031 1 G A - ReadM SNP 0035.scaffold00136 372070 1 G T - ReadM SNP 0035.scaffold00136 372105 1 T C - ReadM SNP 0035.scaffold00136 372121 1 T C - ReadM SNP 0035.scaffold00136 372298 1 T C - ReadM SNP 0035.scaffold00136 372393 1 A T - ReadM SNP 0035.scaffold00136 374702 1 T C - ReadM SNP 0035.scaffold00136 374705 1 C T - ReadM INDEL 0035.scaffold00136 374797 1 G . - ReadM SNP 0035.scaffold00136 374834 1 G T - ReadM INDEL 0035.scaffold00136 375041 1 . C - ReadM SNP 0035.scaffold00136 375062 1 C T - ReadM SNP 0035.scaffold00136 375168 1 A G - ReadM SNP 0035.scaffold00136 375475 1 A C - ReadM SNP 0035.scaffold00136 375538 1 A G - ReadM SNP 0035.scaffold00136 375579 1 G T - ReadM SNP 0035.scaffold00136 375684 1 G T - ReadM SNP 0035.scaffold00136 376168 1 T C - ScafM SNP 0035.scaffold00136 376394 1 T G scaffold3156 ScafM SNP 0035.scaffold00136 376397 1 G T scaffold3156 Both SNP 0035.scaffold00136 376408 1 T A scaffold3156 ScafM SNP 0035.scaffold00136 376455 1 C A scaffold3156 Both INDEL 0035.scaffold00136 376456 1 . A scaffold3156 Both SNP 0035.scaffold00136 376506 1 T G scaffold3156 ScafM SNP 0035.scaffold00136 377242 1 A T scaffold3156 Both SNP 0035.scaffold00136 377301 1 A G scaffold3156 Both SNP 0035.scaffold00136 377341 1 G A scaffold3156 Both SNP 0035.scaffold00136 377385 1 C A scaffold3156 ReadM SNP 0035.scaffold00136 377406 1 A G - ReadM SNP 0035.scaffold00136 377429 1 T C - ReadM SNP 0035.scaffold00136 377806 1 T C - ReadM SNP 0035.scaffold00136 377964 1 A G - ReadM SNP 0035.scaffold00136 378072 1 C G - ReadM SNP 0035.scaffold00136 378087 1 T A - ReadM SNP 0035.scaffold00136 378124 1 C T - ReadM SNP 0035.scaffold00136 378134 1 T A - ReadM SNP 0035.scaffold00136 378227 1 T C - ReadM SNP 0035.scaffold00136 378275 1 G C - ReadM SNP 0035.scaffold00136 378495 1 A T - ReadM SNP 0035.scaffold00136 378509 1 G A - ReadM SNP 0035.scaffold00136 378549 1 G C - ReadM SNP 0035.scaffold00136 378633 1 A T - ReadM SNP 0035.scaffold00136 380590 1 T C - ReadM SNP 0035.scaffold00136 380702 1 C G - ReadM SNP 0035.scaffold00136 380766 1 T C - ReadM SNP 0035.scaffold00136 380791 1 T C - ReadM SNP 0035.scaffold00136 380795 1 C T - ReadM SNP 0035.scaffold00136 380899 1 C A - ReadM SNP 0035.scaffold00136 381146 1 T C - Both SNP 0035.scaffold00136 381302 1 G T scaffold46742 Both SNP 0035.scaffold00136 381418 1 T C scaffold46742 Both SNP 0035.scaffold00136 381446 1 A T scaffold46742 ScafM INDEL 0035.scaffold00136 381646 10 .......... AAGGTTAATT scaffold46742 ScafM SNP 0035.scaffold00136 381654 1 C T scaffold46742 ScafM SNP 0035.scaffold00136 381659 1 G A scaffold46742 Both SNP 0035.scaffold00136 381737 2 TG CC scaffold46742 Both SNP 0035.scaffold00136 381808 1 C A scaffold46742 Both SNP 0035.scaffold00136 381852 1 T A scaffold46742 ScafM SNP 0035.scaffold00136 381923 1 C A scaffold46742 Both SNP 0035.scaffold00136 381932 1 G A scaffold46742 Both SNP 0035.scaffold00136 382014 1 G C scaffold46742 ReadM SNP 0035.scaffold00136 382061 1 C T - ReadM SNP 0035.scaffold00136 382120 1 G A - Both SNP 0035.scaffold00136 382236 1 G A scaffold46742 ScafM SNP 0035.scaffold00136 382249 1 C A scaffold46742 ScafM SNP 0035.scaffold00136 382251 1 A T scaffold46742 Both SNP 0035.scaffold00136 382340 1 T G scaffold46742 ScafM INDEL 0035.scaffold00136 382355 4 .... TGTT scaffold46742 ReadM SNP 0035.scaffold00136 382416 1 C T - ScafM SNP 0035.scaffold00136 382505 1 G C scaffold46742 ReadM SNP 0035.scaffold00136 382695 1 G A - ReadM SNP 0035.scaffold00136 382805 1 A T - ReadM SNP 0035.scaffold00136 382859 1 T C - ReadM SNP 0035.scaffold00136 382868 1 A G - ReadM SNP 0035.scaffold00136 382909 1 T C - ReadM SNP 0035.scaffold00136 383004 1 A G - ReadM SNP 0035.scaffold00136 383094 1 G A - ReadM SNP 0035.scaffold00136 383104 1 A G - ReadM INDEL 0035.scaffold00136 383173 1 . C - ReadM SNP 0035.scaffold00136 383240 1 T C - ReadM SNP 0035.scaffold00136 383360 1 G A - ReadM SNP 0035.scaffold00136 383558 1 A G - ReadM SNP 0035.scaffold00136 383625 1 C T - ReadM SNP 0035.scaffold00136 383681 1 T C - ReadM SNP 0035.scaffold00136 383872 1 A G - ReadM SNP 0035.scaffold00136 383941 1 C T - ReadM SNP 0035.scaffold00136 384026 1 G A - ReadM SNP 0035.scaffold00136 384382 1 T A - ReadM SNP 0035.scaffold00136 384392 1 A G - ReadM SNP 0035.scaffold00136 384415 1 G C - ReadM SNP 0035.scaffold00136 384471 1 T A - ReadM SNP 0035.scaffold00136 384520 1 T C - ReadM SNP 0035.scaffold00136 385081 1 A G - ReadM SNP 0035.scaffold00136 385183 1 T C - ReadM SNP 0035.scaffold00136 385234 1 T C - ReadM SNP 0035.scaffold00136 385340 1 T C - ReadM SNP 0035.scaffold00136 385390 1 C T - ReadM SNP 0035.scaffold00136 385395 1 T C - ReadM SNP 0035.scaffold00136 385457 1 T C - ReadM SNP 0035.scaffold00136 385591 1 G T - ReadM SNP 0035.scaffold00136 385613 1 A G - ReadM SNP 0035.scaffold00136 385730 1 C T - ReadM SNP 0035.scaffold00136 385870 1 T C - ReadM SNP 0035.scaffold00136 385989 1 A C - ReadM SNP 0035.scaffold00136 386042 1 T C - ReadM SNP 0035.scaffold00136 386093 1 T C - ReadM SNP 0035.scaffold00136 386120 1 A G - ReadM SNP 0035.scaffold00136 386193 1 A G - ReadM SNP 0035.scaffold00136 386216 1 A G - ReadM SNP 0035.scaffold00136 386265 1 A G - ReadM SNP 0035.scaffold00136 386350 1 G A - ReadM SNP 0035.scaffold00136 386355 1 G A - ReadM SNP 0035.scaffold00136 386429 1 C T - ReadM SNP 0035.scaffold00136 386539 1 A G - ReadM SNP 0035.scaffold00136 386546 1 A T - ReadM INDEL 0035.scaffold00136 386548 1 . A - ReadM SNP 0035.scaffold00136 386657 1 C A - ReadM SNP 0035.scaffold00136 386732 1 T C - ReadM SNP 0035.scaffold00136 386758 1 A T - ReadM SNP 0035.scaffold00136 386811 1 G T - ReadM SNP 0035.scaffold00136 386930 1 A C - ReadM SNP 0035.scaffold00136 387036 1 A G - ReadM SNP 0035.scaffold00136 387074 1 A G - ReadM SNP 0035.scaffold00136 387257 1 G A - ReadM SNP 0035.scaffold00136 387341 1 A G - ReadM SNP 0035.scaffold00136 387434 1 A G - ReadM SNP 0035.scaffold00136 387516 1 G A - ReadM SNP 0035.scaffold00136 387571 1 C T - ReadM SNP 0035.scaffold00136 387618 1 A C - ReadM SNP 0035.scaffold00136 387678 1 C T - ReadM SNP 0035.scaffold00136 387779 1 C T - ReadM SNP 0035.scaffold00136 387839 1 T A - ReadM SNP 0035.scaffold00136 387929 1 C T - ReadM SNP 0035.scaffold00136 387966 1 T C - ReadM SNP 0035.scaffold00136 387978 2 AA CC - ReadM SNP 0035.scaffold00136 388281 1 A C - ReadM SNP 0035.scaffold00136 388349 1 C T - ReadM SNP 0035.scaffold00136 388451 1 C T - ReadM SNP 0035.scaffold00136 388478 2 GC AA - ScafM SNP 0035.scaffold00136 388687 1 C T scaffold46742 ScafM SNP 0035.scaffold00136 388703 1 T C scaffold46742 ScafM SNP 0035.scaffold00136 388709 1 A T scaffold46742 ScafM SNP 0035.scaffold00136 388728 1 C T scaffold46742 ScafM SNP 0035.scaffold00136 388797 1 G A scaffold46742 ScafM SNP 0035.scaffold00136 388820 1 A G scaffold46742 ReadM INDEL 0035.scaffold00136 392146 2 CT .. - ReadM SNP 0035.scaffold00136 392239 1 T C - ReadM SNP 0035.scaffold00136 392285 1 A T - ReadM SNP 0035.scaffold00136 392330 1 T A - ScafM INDEL 0035.scaffold00136 392654 1 . C scaffold22089 ReadM SNP 0035.scaffold00136 392655 1 T C - ReadM INDEL 0035.scaffold00136 392664 1 . T - ScafM INDEL 0035.scaffold00136 394514 1 . C scaffold22089 ScafM SNP 0035.scaffold00136 394749 1 G T scaffold22089 ScafM SNP 0035.scaffold00136 394753 1 A C scaffold22089 ScafM SNP 0035.scaffold00136 394872 1 T C scaffold17010 ScafM SNP 0035.scaffold00136 394879 1 A G scaffold17010 ScafM SNP 0035.scaffold00136 394919 1 C A scaffold17010 Both SNP 0035.scaffold00136 394937 1 G A scaffold17010 ScafM SNP 0035.scaffold00136 395001 1 C A scaffold17010 Both SNP 0035.scaffold00136 395020 1 A G scaffold17010 Both SNP 0035.scaffold00136 395044 1 C A scaffold17010 ScafM SNP 0035.scaffold00136 395132 1 A G scaffold17010 ScafM SNP 0035.scaffold00136 395135 2 GT AC scaffold17010 ReadM SNP 0035.scaffold00136 395308 1 T C - ReadM SNP 0035.scaffold00136 395365 1 A G - ReadM SNP 0035.scaffold00136 395542 1 A G - ReadM SNP 0035.scaffold00136 395675 1 G C - ReadM SNP 0035.scaffold00136 395728 1 C T - ReadM SNP 0035.scaffold00136 396163 1 G A - ReadM SNP 0035.scaffold00136 396187 1 A G - ReadM SNP 0035.scaffold00136 396264 1 T C - ReadM SNP 0035.scaffold00136 396269 1 T G - ReadM SNP 0035.scaffold00136 396381 1 C A - ReadM SNP 0035.scaffold00136 396427 1 A G - ReadM SNP 0035.scaffold00136 396470 1 A G - ReadM SNP 0035.scaffold00136 396491 1 A G - ReadM SNP 0035.scaffold00136 396512 1 C T - ReadM SNP 0035.scaffold00136 396555 1 A G - ReadM SNP 0035.scaffold00136 396595 1 C A - ReadM SNP 0035.scaffold00136 396601 1 T C - ReadM SNP 0035.scaffold00136 396684 1 C T - ReadM SNP 0035.scaffold00136 396803 1 A T - ReadM SNP 0035.scaffold00136 396833 1 C T - ReadM SNP 0035.scaffold00136 396847 1 C T - ReadM SNP 0035.scaffold00136 397008 1 T C - ReadM SNP 0035.scaffold00136 397257 1 T C - ReadM SNP 0035.scaffold00136 397316 1 A G - ReadM SNP 0035.scaffold00136 397359 1 C T - ReadM SNP 0035.scaffold00136 397387 1 A G - ReadM SNP 0035.scaffold00136 397413 1 T C - ReadM SNP 0035.scaffold00136 397458 1 T C - ReadM SNP 0035.scaffold00136 397493 1 T C - ReadM SNP 0035.scaffold00136 397589 1 G A - ReadM SNP 0035.scaffold00136 397602 1 C T - ReadM SNP 0035.scaffold00136 397643 1 A G - ReadM SNP 0035.scaffold00136 397684 1 C T - ReadM SNP 0035.scaffold00136 397972 1 G A - ReadM SNP 0035.scaffold00136 397983 1 C A - ReadM SNP 0035.scaffold00136 398184 1 T C - ReadM SNP 0035.scaffold00136 398227 1 T C - ReadM SNP 0035.scaffold00136 398230 1 C T - ReadM SNP 0035.scaffold00136 398249 1 G A - ReadM SNP 0035.scaffold00136 398340 1 A G - ReadM SNP 0035.scaffold00136 398345 1 T C - ReadM SNP 0035.scaffold00136 398438 1 A G - Both SNP 0035.scaffold00136 398469 1 T A scaffold22089 Both INDEL 0035.scaffold00136 398478 1 . T scaffold22089 Both SNP 0035.scaffold00136 398554 1 G A scaffold22089 ScafM SNP 0035.scaffold00136 398622 1 T A scaffold22089 ScafM INDEL 0035.scaffold00136 398631 3 TTG ... scaffold22089 ScafM SNP 0035.scaffold00136 398669 1 T C scaffold22089 ScafM SNP 0035.scaffold00136 398828 1 C T scaffold22089 ScafM INDEL 0035.scaffold00136 399023 1 . T scaffold22089 ScafM SNP 0035.scaffold00136 399025 1 G T scaffold22089 Both INDEL 0035.scaffold00136 399181 1 A . scaffold22089 ScafM SNP 0035.scaffold00136 399192 1 C T scaffold22089 ScafM SNP 0035.scaffold00136 399236 1 A C scaffold22089 ReadM SNP 0035.scaffold00136 399425 1 C G - ScafM SNP 0035.scaffold00136 399507 1 A G scaffold22089 ScafM SNP 0035.scaffold00136 399606 1 A G scaffold22089 Both SNP 0035.scaffold00136 399679 1 G T scaffold22089 ReadM SNP 0035.scaffold00136 399930 1 A C - ReadM SNP 0035.scaffold00136 400194 1 C T - ReadM SNP 0035.scaffold00136 400235 1 T C - ReadM SNP 0035.scaffold00136 400325 1 G A - ReadM SNP 0035.scaffold00136 400404 1 T C - ReadM SNP 0035.scaffold00136 400427 1 T C - ReadM SNP 0035.scaffold00136 400566 1 T C - ReadM SNP 0035.scaffold00136 400579 1 G C - ScafM SNP 0035.scaffold00136 400618 1 C G scaffold22089 Both SNP 0035.scaffold00136 400636 1 G A scaffold22089 Both SNP 0035.scaffold00136 400643 1 T C scaffold22089 Both INDEL 0035.scaffold00136 400709 1 C . scaffold22089 Both SNP 0035.scaffold00136 400858 1 G C scaffold22089 ScafM SNP 0035.scaffold00136 400950 1 A G scaffold22089 ScafM INDEL 0035.scaffold00136 401080 1 . G scaffold22089 ScafM SNP 0035.scaffold00136 401163 1 T C scaffold22089 Both SNP 0035.scaffold00136 401201 1 A C scaffold22089 ReadM INDEL 0035.scaffold00136 401267 1 A . - ScafM SNP 0035.scaffold00136 401777 1 T C scaffold22089 ScafM SNP 0035.scaffold00136 401801 1 C A scaffold22089 ScafM SNP 0035.scaffold00136 401832 1 T C scaffold22089 ScafM SNP 0035.scaffold00136 401844 1 C T scaffold22089 ReadM SNP 0035.scaffold00136 403533 1 C A - ReadM SNP 0035.scaffold00136 403578 1 G A - ReadM SNP 0035.scaffold00136 403589 1 T G - ReadM SNP 0035.scaffold00136 403632 1 C T - ReadM SNP 0035.scaffold00136 403696 1 T G - ReadM SNP 0035.scaffold00136 403860 1 T G - ReadM SNP 0035.scaffold00136 403885 1 A C - ReadM SNP 0035.scaffold00136 403971 1 G A - ReadM SNP 0035.scaffold00136 403978 1 A G - ReadM SNP 0035.scaffold00136 404094 1 C T - ReadM SNP 0035.scaffold00136 404164 1 C G - ReadM SNP 0035.scaffold00136 404172 1 C A - ReadM SNP 0035.scaffold00136 404469 1 C T - ReadM SNP 0035.scaffold00136 404802 1 G C - ReadM INDEL 0035.scaffold00136 404813 1 . C - ReadM SNP 0035.scaffold00136 405061 1 T C - ReadM INDEL 0035.scaffold00136 405133 1 T . - ScafM INDEL 0035.scaffold00136 405133 2 TT .C scaffold36115 ScafM SNP 0035.scaffold00136 405184 1 G A scaffold36115 ReadM SNP 0035.scaffold00136 405293 1 T G - ReadM SNP 0035.scaffold00136 405365 1 A T - ReadM SNP 0035.scaffold00136 405665 1 C A - ReadM SNP 0035.scaffold00136 405684 1 A C - ReadM SNP 0035.scaffold00136 405856 1 T G - ReadM SNP 0035.scaffold00136 405906 1 T C - ReadM SNP 0035.scaffold00136 405936 1 G A - ReadM SNP 0035.scaffold00136 406042 1 A G - ScafM SNP 0035.scaffold00136 407859 1 A T scaffold68196 ScafM SNP 0035.scaffold00136 407868 1 A C scaffold68196 ScafM SNP 0035.scaffold00136 407923 1 T C scaffold68196 ScafM SNP 0035.scaffold00136 407955 1 T C scaffold68196 ScafM INDEL 0035.scaffold00136 408017 5 ..... ACCAC scaffold68196 ScafM SNP 0035.scaffold00136 408131 1 T C scaffold68196 ScafM SNP 0035.scaffold00136 408217 1 T C scaffold68196 ScafM SNP 0035.scaffold00136 408260 1 C T scaffold68196 ScafM SNP 0035.scaffold00136 408280 1 T A scaffold68196 ScafM SNP 0035.scaffold00136 408608 1 A G scaffold68196 ScafM SNP 0035.scaffold00136 408629 1 C T scaffold68196 ScafM SNP 0035.scaffold00136 408706 1 T C scaffold68196 ScafM SNP 0035.scaffold00136 408712 1 G T scaffold68196 ScafM SNP 0035.scaffold00136 408757 1 C G scaffold68196 ScafM SNP 0035.scaffold00136 408769 3 AGG GAA scaffold68196 ScafM SNP 0035.scaffold00136 408829 1 C A scaffold68196 ScafM SNP 0035.scaffold00136 408831 1 A G scaffold68196 ScafM SNP 0035.scaffold00136 408840 1 A G scaffold68196 ScafM SNP 0035.scaffold00136 408844 1 G A scaffold68196 ScafM SNP 0035.scaffold00136 408853 1 T G scaffold68196 ScafM SNP 0035.scaffold00136 409094 1 A C scaffold68196 ScafM INDEL 0035.scaffold00136 409177 1 A . scaffold68196 ScafM SNP 0035.scaffold00136 409202 1 G A scaffold68196 ScafM SNP 0035.scaffold00136 409227 1 G A scaffold68196 ScafM SNP 0035.scaffold00136 409261 1 A G scaffold68196 ScafM INDEL 0035.scaffold00136 409306 13 ATAACTACTTCAT ............. scaffold68196 ScafM SNP 0035.scaffold00136 409335 1 A G scaffold68196 ScafM SNP 0035.scaffold00136 409450 1 A C scaffold68196 Both SNP 0035.scaffold00136 409523 1 A C scaffold68196 ScafM INDEL 0035.scaffold00136 409689 1 . A scaffold68196 ScafM SNP 0035.scaffold00136 409740 1 T C scaffold68196 ReadM SNP 0035.scaffold00136 409945 1 T G - ReadM SNP 0035.scaffold00136 409959 1 T G - ReadM SNP 0035.scaffold00136 410106 1 T C - ReadM SNP 0035.scaffold00136 410273 1 T C - ReadM SNP 0035.scaffold00136 410427 1 T C - ReadM SNP 0035.scaffold00136 410440 1 C T - ReadM SNP 0035.scaffold00136 410460 1 T C - ReadM SNP 0035.scaffold00136 410573 1 A G - ReadM SNP 0035.scaffold00136 410745 1 A T - ScafM SNP 0035.scaffold00136 410848 1 C T scaffold40502 Both INDEL 0035.scaffold00136 410967 1 A . scaffold40502 Both SNP 0035.scaffold00136 411001 1 T A scaffold40502 ScafM SNP 0035.scaffold00136 411114 1 T A scaffold40502 ScafM INDEL 0035.scaffold00136 411134 1 A . scaffold40502 Both SNP 0035.scaffold00136 411152 1 A C scaffold40502 ScafM SNP 0035.scaffold00136 411163 1 C A scaffold40502 Both INDEL 0035.scaffold00136 411297 1 . A scaffold40502 Both SNP 0035.scaffold00136 411351 1 A G scaffold40502 ScafM SNP 0035.scaffold00136 411389 1 G T scaffold40502 Both INDEL 0035.scaffold00136 411566 3 ATA ... scaffold40502 Both SNP 0035.scaffold00136 411819 1 A T scaffold40502 Both SNP 0035.scaffold00136 411858 1 A T scaffold40502 Both SNP 0035.scaffold00136 411951 1 A G scaffold40502 Both SNP 0035.scaffold00136 411965 1 A T scaffold40502 ScafM SNP 0035.scaffold00136 412143 1 G A scaffold40502 Both SNP 0035.scaffold00136 412154 1 T A scaffold40502 ScafM INDEL 0035.scaffold00136 412161 1 A . scaffold40502 ScafM SNP 0035.scaffold00136 412184 1 C A scaffold40502 Both SNP 0035.scaffold00136 412314 1 A C scaffold40502 ReadM SNP 0035.scaffold00136 412342 1 A G - ReadM SNP 0035.scaffold00136 412398 1 C A - ReadM SNP 0035.scaffold00136 412441 1 T C - Both SNP 0035.scaffold00136 412491 1 T C scaffold40502 Both SNP 0035.scaffold00136 412497 1 G T scaffold40502 ScafM SNP 0035.scaffold00136 412622 1 G T scaffold40502 Both SNP 0035.scaffold00136 412656 1 A G scaffold40502 ScafM INDEL 0035.scaffold00136 412677 4 .... TATA scaffold40502 ScafM SNP 0035.scaffold00136 412686 2 AA TT scaffold40502 ReadM SNP 0035.scaffold00136 412899 1 T C - ReadM SNP 0035.scaffold00136 413115 1 T C - ReadM SNP 0035.scaffold00136 413153 1 T C - ReadM SNP 0035.scaffold00136 413156 1 T C - ReadM SNP 0035.scaffold00136 413315 1 T C - ScafM SNP 0035.scaffold00136 413370 1 G A scaffold54736 Both SNP 0035.scaffold00136 413411 1 C A scaffold54736 ScafM SNP 0035.scaffold00136 413425 1 A T scaffold54736 Both SNP 0035.scaffold00136 413544 1 C A scaffold54736 Both SNP 0035.scaffold00136 413549 1 T G scaffold54736 Both SNP 0035.scaffold00136 413562 1 C T scaffold54736 ReadM SNP 0035.scaffold00136 413627 1 A C - ReadM SNP 0035.scaffold00136 413885 1 T C - ReadM SNP 0035.scaffold00136 413902 1 C G - ReadM SNP 0035.scaffold00136 413922 1 G C - ReadM SNP 0035.scaffold00136 413968 1 G A - ReadM SNP 0035.scaffold00136 413995 1 G C - Both SNP 0035.scaffold00136 414091 1 G T scaffold5566 Both SNP 0035.scaffold00136 414145 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 414236 1 C T scaffold5566 Both SNP 0035.scaffold00136 414378 1 T C scaffold5566 Both SNP 0035.scaffold00136 414380 1 A C scaffold5566 Both INDEL 0035.scaffold00136 414512 1 T . scaffold5566 ScafM SNP 0035.scaffold00136 414516 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 414535 1 A T scaffold5566 ScafM SNP 0035.scaffold00136 414553 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 414566 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 414569 1 T C scaffold5566 ScafM INDEL 0035.scaffold00136 414596 32 ................................ AATTTTTTTTTTTTTGGTTAAAATATAATATT scaffold5566 ScafM SNP 0035.scaffold00136 414610 1 T G scaffold5566 ScafM SNP 0035.scaffold00136 414636 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 414643 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 414682 1 T C scaffold5566 ScafM INDEL 0035.scaffold00136 414685 3 TGC ... scaffold5566 ScafM SNP 0035.scaffold00136 414715 1 A T scaffold5566 ScafM SNP 0035.scaffold00136 414721 1 C G scaffold5566 ScafM SNP 0035.scaffold00136 414747 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 414774 2 CT AG scaffold5566 ScafM SNP 0035.scaffold00136 414798 1 A C scaffold5566 ScafM SNP 0035.scaffold00136 414816 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 414824 1 G T scaffold5566 ScafM INDEL 0035.scaffold00136 414832 3 TTC ... scaffold5566 ScafM SNP 0035.scaffold00136 414838 1 A C scaffold5566 ScafM SNP 0035.scaffold00136 414840 1 A C scaffold5566 ScafM INDEL 0035.scaffold00136 414849 1 T . scaffold5566 ScafM SNP 0035.scaffold00136 414878 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 414904 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 414934 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 414941 1 C T scaffold5566 ScafM INDEL 0035.scaffold00136 414951 3 AAA ..G scaffold5566 ScafM SNP 0035.scaffold00136 414966 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 415018 1 G T scaffold5566 ScafM SNP 0035.scaffold00136 415035 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 415037 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 415049 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 415061 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 415087 1 A T scaffold5566 ScafM SNP 0035.scaffold00136 415150 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 415157 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 415201 1 G C scaffold5566 Both INDEL 0035.scaffold00136 415405 1 T . scaffold5566 Both SNP 0035.scaffold00136 415420 1 C A scaffold5566 Both SNP 0035.scaffold00136 415451 1 C A scaffold5566 Both SNP 0035.scaffold00136 415604 1 G A scaffold5566 Both SNP 0035.scaffold00136 415644 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 415778 1 T A scaffold5566 Both SNP 0035.scaffold00136 415820 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 415854 1 C T scaffold5566 Both SNP 0035.scaffold00136 415888 1 C T scaffold5566 ScafM INDEL 0035.scaffold00136 415901 1 A . scaffold5566 ScafM SNP 0035.scaffold00136 415916 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 415950 1 C T scaffold5566 ScafM INDEL 0035.scaffold00136 415973 1 C . scaffold5566 ScafM SNP 0035.scaffold00136 415978 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 416008 1 C A scaffold5566 ScafM SNP 0035.scaffold00136 416017 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 416023 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 416031 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 416040 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 416046 1 A C scaffold5566 ScafM SNP 0035.scaffold00136 416070 1 C A scaffold5566 ScafM SNP 0035.scaffold00136 416072 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 416082 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 416112 1 C T scaffold5566 Both SNP 0035.scaffold00136 416207 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 416212 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 416214 1 T G scaffold5566 ScafM INDEL 0035.scaffold00136 416221 5 ..... AAATT scaffold5566 ScafM SNP 0035.scaffold00136 416234 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 416253 1 C A scaffold5566 ScafM SNP 0035.scaffold00136 416291 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 416304 1 T A scaffold5566 ScafM SNP 0035.scaffold00136 416415 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 416418 1 A C scaffold5566 ScafM SNP 0035.scaffold00136 416470 1 A C scaffold5566 ScafM SNP 0035.scaffold00136 416491 2 CC TA scaffold5566 ScafM SNP 0035.scaffold00136 416509 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 416518 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 416531 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 416544 2 CA AT scaffold5566 ScafM SNP 0035.scaffold00136 416561 1 T G scaffold5566 ScafM SNP 0035.scaffold00136 416584 1 T C scaffold5566 ScafM INDEL 0035.scaffold00136 416597 1 . G scaffold5566 ScafM SNP 0035.scaffold00136 416599 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 416609 1 C A scaffold5566 ReadM SNP 0035.scaffold00136 416723 1 C T - ReadM SNP 0035.scaffold00136 417114 1 A T - ReadM SNP 0035.scaffold00136 417591 1 T C - ReadM SNP 0035.scaffold00136 417628 1 A G - ReadM SNP 0035.scaffold00136 417947 1 G A - ReadM SNP 0035.scaffold00136 417966 1 T C - ReadM SNP 0035.scaffold00136 417977 1 T G - ReadM SNP 0035.scaffold00136 418040 1 G T - ReadM SNP 0035.scaffold00136 418514 1 A G - ReadM SNP 0035.scaffold00136 418624 1 C A - ReadM SNP 0035.scaffold00136 419888 1 T G - ReadM SNP 0035.scaffold00136 419943 1 T G - ScafM SNP 0035.scaffold00136 420013 1 C A scaffold33457 ScafM SNP 0035.scaffold00136 420016 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 420053 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 420098 1 T G scaffold33457 ScafM SNP 0035.scaffold00136 420123 1 C G scaffold33457 ReadM INDEL 0035.scaffold00136 420193 1 T . - ScafM SNP 0035.scaffold00136 420231 1 T C scaffold33457 ScafM INDEL 0035.scaffold00136 420245 1 G . scaffold33457 ScafM SNP 0035.scaffold00136 420247 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 420252 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 420264 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 420285 1 C T scaffold33457 ScafM INDEL 0035.scaffold00136 420289 4 .... TTCC scaffold33457 ScafM SNP 0035.scaffold00136 420298 1 A G scaffold33457 ScafM INDEL 0035.scaffold00136 420304 1 T . scaffold33457 ScafM SNP 0035.scaffold00136 420309 1 A T scaffold33457 ScafM SNP 0035.scaffold00136 420311 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 420317 1 C T scaffold33457 Both SNP 0035.scaffold00136 420440 1 A G scaffold33457 ReadM SNP 0035.scaffold00136 420448 1 G C - ReadM SNP 0035.scaffold00136 420723 1 G T - ReadM SNP 0035.scaffold00136 420757 1 G T - ScafM SNP 0035.scaffold00136 421095 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 421151 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 421157 2 TT GC scaffold33457 ScafM SNP 0035.scaffold00136 421164 1 A C scaffold33457 ScafM SNP 0035.scaffold00136 421170 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 421195 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 421217 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 421226 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 421260 1 G A scaffold33457 Both SNP 0035.scaffold00136 421290 1 C T scaffold33457 Both SNP 0035.scaffold00136 421355 1 A G scaffold33457 Both SNP 0035.scaffold00136 421397 1 T A scaffold33457 Both SNP 0035.scaffold00136 421443 1 G A scaffold33457 Both SNP 0035.scaffold00136 421492 1 T C scaffold33457 Both SNP 0035.scaffold00136 421516 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 421539 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 421547 2 AA TG scaffold33457 ReadM SNP 0035.scaffold00136 421639 1 T C - ReadM SNP 0035.scaffold00136 421653 1 T C - ReadM SNP 0035.scaffold00136 421987 1 A T - ReadM SNP 0035.scaffold00136 422119 1 T A - Both SNP 0035.scaffold00136 422666 1 C G scaffold33457 ScafM SNP 0035.scaffold00136 422721 1 T G scaffold33457 ScafM SNP 0035.scaffold00136 422762 1 C T scaffold33457 ScafM INDEL 0035.scaffold00136 422767 6 ...... CCTAGA scaffold33457 ScafM SNP 0035.scaffold00136 422776 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 422827 1 G A scaffold33457 ScafM INDEL 0035.scaffold00136 422851 3 CGG ... scaffold33457 ScafM SNP 0035.scaffold00136 422893 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 422916 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 422936 1 C A scaffold33457 ScafM SNP 0035.scaffold00136 422949 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 422965 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 422986 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 422997 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 423037 1 C G scaffold33457 ScafM SNP 0035.scaffold00136 423045 1 C T scaffold33457 ReadM SNP 0035.scaffold00136 423197 1 T C - ReadM INDEL 0035.scaffold00136 423218 2 AA .. - ReadM SNP 0035.scaffold00136 423303 1 A G - ReadM INDEL 0035.scaffold00136 423357 1 G . - ReadM SNP 0035.scaffold00136 423373 1 A C - ReadM SNP 0035.scaffold00136 423413 1 A G - ScafM SNP 0035.scaffold00136 424160 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 424189 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 424194 1 C T scaffold33457 ScafM SNP 0035.scaffold00136 424203 1 A C scaffold33457 ScafM SNP 0035.scaffold00136 424213 1 C T scaffold33457 Both SNP 0035.scaffold00136 424273 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 424321 1 A C scaffold33457 ScafM SNP 0035.scaffold00136 424374 1 A G scaffold33457 ScafM SNP 0035.scaffold00136 424385 2 GT TC scaffold33457 ScafM SNP 0035.scaffold00136 424416 1 C G scaffold33457 ScafM SNP 0035.scaffold00136 424432 1 C T scaffold33457 ScafM INDEL 0035.scaffold00136 424442 2 .. TG scaffold33457 ScafM INDEL 0035.scaffold00136 424466 2 AA .C scaffold33457 ScafM SNP 0035.scaffold00136 424496 1 C A scaffold33457 ScafM SNP 0035.scaffold00136 424512 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 424562 1 T G scaffold33457 ScafM SNP 0035.scaffold00136 424572 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 424612 1 T C scaffold33457 ScafM SNP 0035.scaffold00136 424636 1 G A scaffold33457 ScafM SNP 0035.scaffold00136 424659 1 T G scaffold33457 ScafM SNP 0035.scaffold00136 424975 1 G C scaffold33457 ScafM SNP 0035.scaffold00136 424987 1 A T scaffold33457 ReadM SNP 0035.scaffold00136 427426 1 C T - ReadM SNP 0035.scaffold00136 429107 1 T C - ScafM SNP 0035.scaffold00136 430085 1 T A scaffold29105 ScafM SNP 0035.scaffold00136 430096 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 430101 1 A G scaffold29105 ScafM SNP 0035.scaffold00136 430208 1 C G scaffold29105 ScafM SNP 0035.scaffold00136 430223 1 A C scaffold29105 ScafM INDEL 0035.scaffold00136 430239 15 ............... TATAACGTGACATGT scaffold29105 ScafM SNP 0035.scaffold00136 430250 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 430332 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 431313 1 G C scaffold29105 ScafM SNP 0035.scaffold00136 431345 1 A G scaffold29105 ReadM INDEL 0035.scaffold00136 432187 1 . C - ReadM SNP 0035.scaffold00136 432213 1 G T - ScafM SNP 0035.scaffold00136 432556 1 T G scaffold29105 ScafM SNP 0035.scaffold00136 432561 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 432602 1 C T scaffold29105 ScafM INDEL 0035.scaffold00136 432604 4 .... CAAC scaffold29105 ScafM SNP 0035.scaffold00136 432611 1 G T scaffold29105 ScafM SNP 0035.scaffold00136 432627 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 433612 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 433706 1 G T scaffold29105 ScafM INDEL 0035.scaffold00136 433710 1 A . scaffold29105 ScafM SNP 0035.scaffold00136 434290 1 A T scaffold29105 ScafM SNP 0035.scaffold00136 434408 1 A T scaffold29105 ScafM SNP 0035.scaffold00136 434439 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 434466 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 434473 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 434504 1 A G scaffold29105 ScafM SNP 0035.scaffold00136 434552 1 T G scaffold29105 ScafM SNP 0035.scaffold00136 434565 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 434584 1 A T scaffold29105 ScafM SNP 0035.scaffold00136 434649 1 C A scaffold29105 ScafM SNP 0035.scaffold00136 434654 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 434687 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 434711 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 434722 2 GA AG scaffold29105 ScafM SNP 0035.scaffold00136 434778 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 434812 1 G T scaffold29105 ScafM INDEL 0035.scaffold00136 434850 3 ... CAC scaffold29105 ScafM SNP 0035.scaffold00136 434871 1 G C scaffold29105 ScafM SNP 0035.scaffold00136 434903 1 T A scaffold29105 ReadM SNP 0035.scaffold00136 437659 1 C G - ReadM SNP 0035.scaffold00136 437731 1 G A - ReadM SNP 0035.scaffold00136 441544 1 A G - ScafM SNP 0035.scaffold00136 444269 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 444282 1 G T scaffold29105 ScafM SNP 0035.scaffold00136 444290 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 444293 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 444374 1 C G scaffold29105 ScafM SNP 0035.scaffold00136 444376 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 444773 1 A T scaffold29105 ScafM SNP 0035.scaffold00136 444777 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 444811 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 444876 1 C G scaffold29105 ScafM SNP 0035.scaffold00136 444880 1 G T scaffold29105 ReadM SNP 0035.scaffold00136 448087 1 C A - ReadM SNP 0035.scaffold00136 448323 1 A C - ReadM SNP 0035.scaffold00136 448346 1 A G - ReadM SNP 0035.scaffold00136 448364 1 T C - ReadM SNP 0035.scaffold00136 448594 1 A G - ReadM SNP 0035.scaffold00136 448643 1 G A - ReadM SNP 0035.scaffold00136 448664 1 G C - ReadM SNP 0035.scaffold00136 448693 1 T C - ReadM SNP 0035.scaffold00136 449488 1 G C - ReadM SNP 0035.scaffold00136 450203 1 C G - ReadM SNP 0035.scaffold00136 450330 1 C T - ScafM SNP 0035.scaffold00136 453307 1 T C scaffold524 ScafM INDEL 0035.scaffold00136 453393 4 ACAT .... scaffold524 ReadM SNP 0035.scaffold00136 460241 1 A G - ReadM SNP 0035.scaffold00136 460783 1 G T - ReadM SNP 0035.scaffold00136 460794 1 T C - ReadM SNP 0035.scaffold00136 460895 1 T A - ReadM SNP 0035.scaffold00136 460941 1 C T - ReadM SNP 0035.scaffold00136 460972 1 A G - ScafM SNP 0035.scaffold00136 461457 1 G T scaffold29105 ScafM SNP 0035.scaffold00136 461542 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 461562 1 T C scaffold29105 ScafM SNP 0035.scaffold00136 461606 1 T G scaffold29105 ScafM SNP 0035.scaffold00136 461644 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 461667 1 C T scaffold29105 ScafM INDEL 0035.scaffold00136 461691 5 GCAGC ..... scaffold29105 ScafM INDEL 0035.scaffold00136 461698 5 CTGAA ..... scaffold29105 ScafM INDEL 0035.scaffold00136 461704 2 GT .. scaffold29105 ScafM SNP 0035.scaffold00136 461780 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 461797 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 461880 1 T A scaffold29105 ScafM SNP 0035.scaffold00136 461894 1 A G scaffold29105 ScafM SNP 0035.scaffold00136 461906 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 461969 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 461986 1 C T scaffold29105 ScafM SNP 0035.scaffold00136 462048 2 CG AT scaffold29105 ReadM SNP 0035.scaffold00136 462560 1 C A - ReadM SNP 0035.scaffold00136 462712 1 T C - ReadM SNP 0035.scaffold00136 462805 1 G A - ReadM SNP 0035.scaffold00136 462922 1 A C - Both SNP 0035.scaffold00136 463343 1 G T scaffold29105 ScafM SNP 0035.scaffold00136 463437 1 A G scaffold29105 ScafM SNP 0035.scaffold00136 463443 1 T A scaffold29105 ScafM SNP 0035.scaffold00136 463494 1 T G scaffold29105 ScafM SNP 0035.scaffold00136 463521 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 463530 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 464920 1 T G scaffold29105 ScafM SNP 0035.scaffold00136 464980 1 A G scaffold29105 ScafM SNP 0035.scaffold00136 465008 1 G A scaffold29105 ScafM SNP 0035.scaffold00136 465047 1 T A scaffold29105 ScafM INDEL 0035.scaffold00136 465060 1 . A scaffold29105 ScafM SNP 0035.scaffold00136 465115 1 A C scaffold29105 ScafM SNP 0035.scaffold00136 469509 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 469617 1 T A scaffold73806 ScafM SNP 0035.scaffold00136 469620 1 T C scaffold73806 ScafM SNP 0035.scaffold00136 469624 1 C G scaffold73806 ScafM SNP 0035.scaffold00136 469629 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 469642 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 469749 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 469811 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 469821 1 T C scaffold73806 ScafM SNP 0035.scaffold00136 469867 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 469953 1 C A scaffold73806 ScafM SNP 0035.scaffold00136 469968 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 469983 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 470026 1 A C scaffold73806 ScafM INDEL 0035.scaffold00136 470165 1 . A scaffold73806 ScafM SNP 0035.scaffold00136 470231 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 470245 1 T A scaffold73806 ReadM SNP 0035.scaffold00136 470371 1 A G - Both SNP 0035.scaffold00136 470464 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 470513 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 470553 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 470575 1 G C scaffold73806 Both SNP 0035.scaffold00136 470732 1 G T scaffold73806 ScafM SNP 0035.scaffold00136 470771 1 T C scaffold73806 ScafM SNP 0035.scaffold00136 470838 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 471276 1 A G scaffold73806 ScafM SNP 0035.scaffold00136 471295 1 T C scaffold73806 ScafM SNP 0035.scaffold00136 471310 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 471403 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 471615 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 471635 1 A G scaffold73806 ScafM SNP 0035.scaffold00136 471653 1 G A scaffold73806 Both SNP 0035.scaffold00136 471738 1 A G scaffold73806 Both SNP 0035.scaffold00136 471749 1 G C scaffold73806 ScafM SNP 0035.scaffold00136 471918 1 T C scaffold73806 ScafM INDEL 0035.scaffold00136 471940 9 ......... GGCAGCACA scaffold73806 ScafM SNP 0035.scaffold00136 472043 1 T C scaffold73806 ScafM SNP 0035.scaffold00136 472092 1 G T scaffold73806 ScafM SNP 0035.scaffold00136 472159 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 472367 1 G T scaffold73806 ScafM SNP 0035.scaffold00136 472371 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 472445 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 472488 1 T A scaffold73806 ScafM SNP 0035.scaffold00136 473718 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473724 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473727 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473733 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473748 3 CAT TTC scaffold36720 ScafM SNP 0035.scaffold00136 473754 2 AT TC scaffold36720 ScafM SNP 0035.scaffold00136 473769 2 AC TT scaffold36720 ScafM SNP 0035.scaffold00136 473779 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473784 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473790 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473795 2 AG TA scaffold36720 ScafM SNP 0035.scaffold00136 473823 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473843 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473850 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473855 2 CC AA scaffold36720 ScafM SNP 0035.scaffold00136 473867 2 TT CC scaffold36720 ScafM SNP 0035.scaffold00136 473882 1 A T scaffold36720 ScafM SNP 0035.scaffold00136 473886 1 G A scaffold36720 ScafM SNP 0035.scaffold00136 473890 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473895 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473898 1 A C scaffold36720 ScafM SNP 0035.scaffold00136 473901 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 473907 1 T A scaffold36720 ScafM SNP 0035.scaffold00136 473926 1 A G scaffold36720 ScafM SNP 0035.scaffold00136 473932 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 473934 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 473957 1 A C scaffold36720 ScafM SNP 0035.scaffold00136 473969 2 TT AA scaffold36720 ScafM INDEL 0035.scaffold00136 473973 1 G . scaffold36720 ScafM INDEL 0035.scaffold00136 473976 1 . C scaffold36720 ScafM SNP 0035.scaffold00136 473989 1 A G scaffold36720 ScafM SNP 0035.scaffold00136 474019 2 AA TG scaffold36720 ScafM SNP 0035.scaffold00136 474028 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 474048 2 AC TT scaffold36720 ScafM SNP 0035.scaffold00136 474059 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 474069 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 474072 1 A T scaffold36720 ScafM SNP 0035.scaffold00136 474085 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 474094 1 C T scaffold36720 ScafM SNP 0035.scaffold00136 474096 1 A T scaffold36720 ScafM SNP 0035.scaffold00136 474098 1 T C scaffold36720 ScafM SNP 0035.scaffold00136 474113 1 A C scaffold36720 ScafM SNP 0035.scaffold00136 479045 1 T A scaffold73806 ScafM SNP 0035.scaffold00136 479051 1 A T scaffold73806 ScafM SNP 0035.scaffold00136 479071 1 T G scaffold73806 ScafM SNP 0035.scaffold00136 479157 1 A G scaffold73806 ScafM SNP 0035.scaffold00136 479166 1 G C scaffold73806 ScafM SNP 0035.scaffold00136 479347 1 C A scaffold73806 ScafM INDEL 0035.scaffold00136 479482 2 .T AC scaffold73806 ScafM INDEL 0035.scaffold00136 479587 1 . A scaffold73806 ScafM SNP 0035.scaffold00136 479664 1 T C scaffold73806 Both SNP 0035.scaffold00136 479697 1 A C scaffold73806 ScafM SNP 0035.scaffold00136 479744 1 C T scaffold73806 ScafM SNP 0035.scaffold00136 479769 1 A G scaffold73806 ScafM SNP 0035.scaffold00136 479778 1 A G scaffold73806 ScafM SNP 0035.scaffold00136 479790 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 479814 1 G A scaffold73806 ScafM SNP 0035.scaffold00136 479833 1 C A scaffold73806 ScafM SNP 0035.scaffold00136 479893 1 C T scaffold73806 ReadM SNP 0035.scaffold00136 480954 1 G A - ReadM SNP 0035.scaffold00136 481033 1 C T - ScafM SNP 0035.scaffold00136 481320 1 T G scaffold73806 ScafM INDEL 0035.scaffold00136 481585 1 A . scaffold5566 ScafM SNP 0035.scaffold00136 481590 1 A C scaffold5566 ScafM INDEL 0035.scaffold00136 481607 1 A . scaffold5566 ScafM SNP 0035.scaffold00136 481629 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 481649 1 C G scaffold5566 ScafM SNP 0035.scaffold00136 481651 1 C G scaffold5566 ScafM INDEL 0035.scaffold00136 481665 1 . C scaffold5566 ScafM INDEL 0035.scaffold00136 481698 6 ...... GGCCCC scaffold5566 ScafM INDEL 0035.scaffold00136 481699 5 ..... GCCTC scaffold5566 ScafM INDEL 0035.scaffold00136 481734 1 C . scaffold5566 ScafM SNP 0035.scaffold00136 481739 1 A C scaffold5566 ScafM INDEL 0035.scaffold00136 481770 1 C . scaffold5566 ScafM SNP 0035.scaffold00136 481786 1 C A scaffold5566 ScafM SNP 0035.scaffold00136 481808 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 481855 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 481862 1 C A scaffold5566 ScafM SNP 0035.scaffold00136 481906 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 481910 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 481917 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 481929 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 481933 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 482003 2 GG AA scaffold5566 ScafM SNP 0035.scaffold00136 482025 1 T G scaffold5566 ScafM SNP 0035.scaffold00136 482045 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 482073 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 482086 2 CA TG scaffold5566 ScafM INDEL 0035.scaffold00136 482116 2 .. CT scaffold5566 ScafM SNP 0035.scaffold00136 482135 1 G C scaffold5566 ScafM SNP 0035.scaffold00136 482139 1 G T scaffold5566 ScafM SNP 0035.scaffold00136 482145 1 G A scaffold5566 ScafM SNP 0035.scaffold00136 482161 1 G A scaffold5566 ScafM INDEL 0035.scaffold00136 482193 1 A . scaffold5566 ScafM SNP 0035.scaffold00136 482213 1 A G scaffold5566 ScafM SNP 0035.scaffold00136 482513 2 CC TT scaffold35073 ScafM SNP 0035.scaffold00136 482551 1 G T scaffold35073 ScafM SNP 0035.scaffold00136 482585 1 T G scaffold35073 ScafM SNP 0035.scaffold00136 482877 1 C T scaffold5566 ScafM SNP 0035.scaffold00136 482912 2 TG CC scaffold5566 ScafM SNP 0035.scaffold00136 482936 1 T C scaffold5566 ScafM SNP 0035.scaffold00136 483357 1 T C scaffold7313 ScafM SNP 0035.scaffold00136 483413 1 A G scaffold7313 ReadM SNP 0035.scaffold00136 484241 1 T C - ReadM SNP 0035.scaffold00136 484654 1 A G - ScafM SNP 0035.scaffold00136 484674 1 C T scaffold35073 ScafM SNP 0035.scaffold00136 484799 1 T G scaffold35073 Both SNP 0035.scaffold00136 484811 1 C T scaffold35073 ReadM SNP 0035.scaffold00136 485430 1 A G - ScafM SNP 0035.scaffold00136 485570 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 485626 1 T C scaffold35073 ScafM SNP 0035.scaffold00136 485646 1 C A scaffold35073 ScafM SNP 0035.scaffold00136 485650 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 485668 1 G T scaffold35073 ScafM INDEL 0035.scaffold00136 485677 8 ........ TTCCCACC scaffold35073 ScafM INDEL 0035.scaffold00136 485678 4 .... GTTT scaffold35073 ScafM SNP 0035.scaffold00136 485681 1 C T scaffold35073 ScafM INDEL 0035.scaffold00136 485683 3 ..T CAA scaffold35073 ScafM SNP 0035.scaffold00136 485719 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 485765 1 G T scaffold35073 ScafM SNP 0035.scaffold00136 485768 1 G A scaffold35073 ScafM INDEL 0035.scaffold00136 485821 1 A . scaffold35073 ScafM SNP 0035.scaffold00136 485897 1 G T scaffold35073 ScafM SNP 0035.scaffold00136 485925 1 G A scaffold35073 ReadM INDEL 0035.scaffold00136 485988 1 . T - ScafM SNP 0035.scaffold00136 486005 1 A G scaffold35073 ReadM SNP 0035.scaffold00136 486010 1 T C - ScafM SNP 0035.scaffold00136 486034 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 486041 1 C T scaffold35073 ScafM SNP 0035.scaffold00136 486067 1 C G scaffold35073 ScafM SNP 0035.scaffold00136 486100 1 G C scaffold35073 ScafM SNP 0035.scaffold00136 486105 1 C G scaffold35073 ScafM SNP 0035.scaffold00136 486127 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 486139 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 486265 1 T A scaffold35073 ScafM SNP 0035.scaffold00136 486457 1 T A scaffold35073 ScafM SNP 0035.scaffold00136 486497 1 C T scaffold35073 ScafM INDEL 0035.scaffold00136 486552 1 C . scaffold35073 ScafM SNP 0035.scaffold00136 486578 2 CA GG scaffold35073 ScafM SNP 0035.scaffold00136 486607 1 C T scaffold35073 ScafM INDEL 0035.scaffold00136 486627 3 TGT ... scaffold35073 ScafM SNP 0035.scaffold00136 486631 1 G A scaffold35073 ScafM INDEL 0035.scaffold00136 486656 1 . C scaffold35073 ScafM SNP 0035.scaffold00136 486714 1 T C scaffold35073 ScafM INDEL 0035.scaffold00136 486758 1 A . scaffold35073 ScafM SNP 0035.scaffold00136 486772 1 G C scaffold35073 ScafM SNP 0035.scaffold00136 486893 1 C A scaffold35073 ScafM SNP 0035.scaffold00136 486964 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 487017 1 G A scaffold35073 ScafM INDEL 0035.scaffold00136 487050 2 .. AA scaffold35073 ScafM SNP 0035.scaffold00136 487064 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 487115 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 487154 1 G A scaffold35073 ReadM SNP 0035.scaffold00136 489746 1 T A - ScafM SNP 0035.scaffold00136 490169 1 T C scaffold24976 ReadM INDEL 0035.scaffold00136 490440 1 . C - ReadM SNP 0035.scaffold00136 490504 1 C T - ReadM SNP 0035.scaffold00136 490537 1 C G - ReadM SNP 0035.scaffold00136 490586 1 C G - ScafM SNP 0035.scaffold00136 490721 1 C T scaffold35073 ScafM SNP 0035.scaffold00136 490723 1 T C scaffold35073 ScafM SNP 0035.scaffold00136 490759 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 490784 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 490842 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 490885 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 490889 1 G C scaffold35073 ScafM INDEL 0035.scaffold00136 490918 1 G . scaffold35073 ScafM SNP 0035.scaffold00136 491122 1 C T scaffold35073 ScafM SNP 0035.scaffold00136 491195 1 G T scaffold35073 ScafM SNP 0035.scaffold00136 491210 1 T A scaffold35073 ScafM SNP 0035.scaffold00136 491292 1 G A scaffold35073 ScafM SNP 0035.scaffold00136 491309 1 T G scaffold35073 ScafM SNP 0035.scaffold00136 491391 1 G C scaffold35073 ScafM SNP 0035.scaffold00136 491400 1 T A scaffold35073 ScafM SNP 0035.scaffold00136 491454 1 A G scaffold35073 ScafM SNP 0035.scaffold00136 493171 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 493173 1 T G scaffold29685 ScafM SNP 0035.scaffold00136 493177 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 493193 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 493227 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 493248 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 493254 1 G T scaffold29685 ScafM INDEL 0035.scaffold00136 493256 1 C . scaffold29685 ScafM INDEL 0035.scaffold00136 493276 12 ............ ATAGGTTCTCAA scaffold29685 ScafM SNP 0035.scaffold00136 493279 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 493290 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 493299 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493307 1 G C scaffold29685 ScafM SNP 0035.scaffold00136 493310 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 493350 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 493381 1 G C scaffold29685 ScafM SNP 0035.scaffold00136 493384 1 C G scaffold29685 ScafM SNP 0035.scaffold00136 493408 2 CC TT scaffold29685 ScafM SNP 0035.scaffold00136 493415 1 C A scaffold29685 ScafM SNP 0035.scaffold00136 493422 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493427 1 G C scaffold29685 ScafM SNP 0035.scaffold00136 493429 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 493431 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493434 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 493444 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493447 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 493459 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493467 1 G C scaffold29685 ScafM SNP 0035.scaffold00136 493473 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 493482 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 493569 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 493574 1 C T scaffold29685 ScafM INDEL 0035.scaffold00136 493587 3 ... CAT scaffold29685 ScafM SNP 0035.scaffold00136 493623 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 493631 2 TT CC scaffold29685 ScafM SNP 0035.scaffold00136 493634 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 493657 1 G A scaffold29685 ScafM INDEL 0035.scaffold00136 496974 1 T . scaffold29685 ScafM SNP 0035.scaffold00136 496983 1 C G scaffold29685 ScafM SNP 0035.scaffold00136 496987 1 T A scaffold29685 ScafM SNP 0035.scaffold00136 496990 1 C G scaffold29685 ScafM SNP 0035.scaffold00136 496999 1 C A scaffold29685 ScafM SNP 0035.scaffold00136 497008 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 497020 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 497024 1 C A scaffold29685 ScafM INDEL 0035.scaffold00136 497026 1 . C scaffold29685 ScafM SNP 0035.scaffold00136 497028 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 497049 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497062 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497082 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 497108 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 497127 1 C T scaffold29685 ScafM INDEL 0035.scaffold00136 497137 3 ... CCG scaffold29685 ScafM SNP 0035.scaffold00136 497152 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 497160 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497180 1 G C scaffold29685 ScafM SNP 0035.scaffold00136 497185 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497189 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497347 1 A T scaffold29685 ScafM SNP 0035.scaffold00136 497352 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497356 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497366 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 497375 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497377 1 T G scaffold29685 ScafM INDEL 0035.scaffold00136 497397 7 GCTACTT ....... scaffold29685 ScafM SNP 0035.scaffold00136 497606 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497615 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 497657 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 497669 1 C A scaffold29685 ScafM SNP 0035.scaffold00136 497910 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 497919 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497929 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 497931 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 497933 1 A T scaffold29685 ScafM SNP 0035.scaffold00136 497937 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 497974 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 497985 1 A T scaffold29685 ScafM SNP 0035.scaffold00136 498049 1 T G scaffold29685 ScafM SNP 0035.scaffold00136 498066 1 C G scaffold29685 ScafM INDEL 0035.scaffold00136 498073 1 . G scaffold29685 ScafM SNP 0035.scaffold00136 498078 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 498090 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 498106 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 498133 1 C T scaffold29685 ScafM INDEL 0035.scaffold00136 498138 1 T . scaffold29685 ScafM SNP 0035.scaffold00136 498155 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 498161 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 498197 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 498228 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 498250 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 498263 1 C G scaffold29685 ScafM INDEL 0035.scaffold00136 498308 3 TTT ... scaffold29685 ScafM SNP 0035.scaffold00136 498318 1 A C scaffold29685 ScafM SNP 0035.scaffold00136 499477 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 499479 1 A T scaffold29685 ScafM INDEL 0035.scaffold00136 499491 1 G . scaffold29685 ScafM INDEL 0035.scaffold00136 499501 2 .G TT scaffold29685 ScafM INDEL 0035.scaffold00136 499512 2 TT .. scaffold29685 ScafM SNP 0035.scaffold00136 499523 1 T G scaffold29685 ScafM SNP 0035.scaffold00136 499538 1 C T scaffold29685 ScafM SNP 0035.scaffold00136 499547 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 499550 1 G T scaffold29685 ScafM SNP 0035.scaffold00136 499574 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 499710 1 A G scaffold12009 ScafM SNP 0035.scaffold00136 499728 1 C T scaffold12009 ScafM SNP 0035.scaffold00136 499733 1 A T scaffold12009 ScafM SNP 0035.scaffold00136 499759 1 T A scaffold12009 ScafM SNP 0035.scaffold00136 499784 1 G A scaffold12009 ScafM SNP 0035.scaffold00136 499822 1 T C scaffold12009 ScafM SNP 0035.scaffold00136 499833 1 T A scaffold12009 ScafM INDEL 0035.scaffold00136 499841 9 TTCACAATA ......... scaffold12009 ScafM SNP 0035.scaffold00136 500907 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 500914 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 500930 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 501073 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 501088 2 AA TC scaffold29685 ScafM SNP 0035.scaffold00136 501116 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 501134 1 G T scaffold29685 ScafM INDEL 0035.scaffold00136 501157 12 AGAATGGTATTA ............ scaffold29685 ScafM INDEL 0035.scaffold00136 501238 1 . A scaffold29685 Both SNP 0035.scaffold00136 501250 1 T C scaffold29685 ScafM SNP 0035.scaffold00136 501294 1 T A scaffold29685 ScafM INDEL 0035.scaffold00136 501398 1 T . scaffold29685 ScafM SNP 0035.scaffold00136 501558 1 G A scaffold29685 Both SNP 0035.scaffold00136 501611 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 501693 1 A G scaffold29685 ScafM INDEL 0035.scaffold00136 501713 1 A . scaffold29685 ScafM INDEL 0035.scaffold00136 501730 2 .. AT scaffold29685 ScafM INDEL 0035.scaffold00136 501801 1 . A scaffold29685 ScafM SNP 0035.scaffold00136 501913 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 501921 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 501945 1 G A scaffold29685 ScafM SNP 0035.scaffold00136 501956 1 A G scaffold29685 ScafM SNP 0035.scaffold00136 502700 4 AGGA TCTC scaffold29685 ReadM SNP 0035.scaffold00136 502951 1 T G - ReadM SNP 0035.scaffold00136 503344 1 T C - ReadM SNP 0035.scaffold00136 503719 1 C T - ReadM SNP 0035.scaffold00136 504134 1 C G - ReadM INDEL 0035.scaffold00136 504377 1 . A - ReadM SNP 0035.scaffold00136 504498 1 T C - ReadM SNP 0035.scaffold00136 504552 1 C G - ReadM SNP 0035.scaffold00136 504619 1 A C - ReadM SNP 0035.scaffold00136 504716 1 C T - ReadM SNP 0035.scaffold00136 504737 1 G A - ReadM SNP 0035.scaffold00136 504793 1 G A - ReadM INDEL 0035.scaffold00136 504887 1 A . - ReadM SNP 0035.scaffold00136 504955 1 G A - ReadM SNP 0035.scaffold00136 504967 1 C T - ReadM SNP 0035.scaffold00136 505030 1 G C - ReadM SNP 0035.scaffold00136 505070 1 G A - Both SNP 0035.scaffold00136 505409 1 A C C19661931 ScafM SNP 0035.scaffold00136 505704 1 G T C19661931 Both SNP 0035.scaffold00136 505736 1 C T C19661931 ScafM SNP 0035.scaffold00136 505781 1 C T C19661931 Both SNP 0035.scaffold00136 505853 1 A G C19661931 ScafM INDEL 0035.scaffold00136 505901 25 ATTTTCTGGTTTGGTTGAATTAGGA ......................... C19661931 ScafM INDEL 0035.scaffold00136 505927 1 A . C19661931 ReadM INDEL 0035.scaffold00136 506314 2 .. GC - ReadM SNP 0035.scaffold00136 506356 1 G C - ReadM SNP 0035.scaffold00136 506411 1 T C - ReadM SNP 0035.scaffold00136 506423 1 G T - ReadM SNP 0035.scaffold00136 506442 1 A G - ReadM INDEL 0035.scaffold00136 506471 1 . T - ReadM SNP 0035.scaffold00136 506531 1 G A - ReadM SNP 0035.scaffold00136 506886 1 T A - ReadM INDEL 0035.scaffold00136 507045 1 . T - ReadM SNP 0035.scaffold00136 507069 1 G C - ReadM SNP 0035.scaffold00136 507106 1 T G - ReadM SNP 0035.scaffold00136 507123 1 C T - Both SNP 0035.scaffold00136 507242 1 A C C19679839 Both SNP 0035.scaffold00136 507476 1 G T C19679839 ScafM SNP 0035.scaffold00136 507740 1 C T C19679839 ScafM SNP 0035.scaffold00136 507743 1 T C C19679839 ScafM SNP 0035.scaffold00136 507748 1 A T C19679839 ScafM SNP 0035.scaffold00136 507927 1 C T C19679839 Both SNP 0035.scaffold00136 508019 1 A C C19679839 Both SNP 0035.scaffold00136 508118 1 A G C19679839 ScafM SNP 0035.scaffold00136 508202 1 A T C19679839 ScafM INDEL 0035.scaffold00136 508253 3 CTT ... C19679839 Both SNP 0035.scaffold00136 508324 1 G A C19679839 ScafM SNP 0035.scaffold00136 508366 1 C T C19679839 ReadM SNP 0035.scaffold00136 508422 1 T G - ReadM SNP 0035.scaffold00136 508432 1 C T - ReadM SNP 0035.scaffold00136 508535 1 T G - ScafM SNP 0035.scaffold00136 509929 1 T C scaffold21497 ReadM SNP 0035.scaffold00136 510099 1 A G - Both SNP 0035.scaffold00136 510829 1 T C scaffold21497 Both SNP 0035.scaffold00136 510840 1 G A scaffold21497 ReadM SNP 0035.scaffold00136 510894 1 T G - Both SNP 0035.scaffold00136 510935 1 A G scaffold21497 ScafM SNP 0035.scaffold00136 510984 1 A G scaffold21497 ScafM SNP 0035.scaffold00136 510990 1 C A scaffold21497 ScafM INDEL 0035.scaffold00136 511002 1 C . scaffold21497 Both SNP 0035.scaffold00136 511052 1 T C scaffold21497 Both SNP 0035.scaffold00136 511087 1 A T scaffold21497 ReadM INDEL 0035.scaffold00136 511171 1 . G - ReadM SNP 0035.scaffold00136 511176 1 A C - ReadM SNP 0035.scaffold00136 511192 1 G A - ScafM SNP 0035.scaffold00136 511534 1 T C scaffold21497 ScafM SNP 0035.scaffold00136 511541 1 C T scaffold21497 ScafM SNP 0035.scaffold00136 511574 1 A G scaffold21497 ScafM SNP 0035.scaffold00136 511598 1 T C scaffold21497 ScafM SNP 0035.scaffold00136 511630 1 G A scaffold21497 Both SNP 0035.scaffold00136 513086 1 C T scaffold21497 Both INDEL 0035.scaffold00136 513108 1 A . scaffold21497 Both SNP 0035.scaffold00136 513140 1 T A scaffold21497 Both SNP 0035.scaffold00136 513286 1 G A scaffold21497 Both SNP 0035.scaffold00136 513313 1 C T scaffold21497 Both SNP 0035.scaffold00136 513355 1 T C scaffold21497 Both SNP 0035.scaffold00136 513363 1 G T scaffold21497 ScafM SNP 0035.scaffold00136 513478 1 G T scaffold21497 Both SNP 0035.scaffold00136 513494 1 T C scaffold21497 Both SNP 0035.scaffold00136 513596 1 G C scaffold21497 Both SNP 0035.scaffold00136 513741 1 G A scaffold21497 Both SNP 0035.scaffold00136 513775 1 G A scaffold21497 Both SNP 0035.scaffold00136 513845 1 G A scaffold21497 ScafM SNP 0035.scaffold00136 513888 1 G C scaffold21497 ScafM SNP 0035.scaffold00136 513958 2 GA TC scaffold21497 Both SNP 0035.scaffold00136 513986 1 A T scaffold21497 Both SNP 0035.scaffold00136 514019 1 T C scaffold21497 Both INDEL 0035.scaffold00136 514073 1 G . scaffold21497 ScafM INDEL 0035.scaffold00136 514153 1 . G scaffold21497 ScafM INDEL 0035.scaffold00136 514155 1 . G scaffold21497 ScafM SNP 0035.scaffold00136 514199 1 T C scaffold21497 ScafM INDEL 0035.scaffold00136 514246 2 AT .. scaffold21497 Both SNP 0035.scaffold00136 514277 1 A C scaffold21497 Both SNP 0035.scaffold00136 514297 1 G A scaffold21497 Both SNP 0035.scaffold00136 514501 1 G A scaffold21497 ScafM SNP 0035.scaffold00136 514512 1 C G scaffold21497 Both SNP 0035.scaffold00136 514569 1 A G scaffold21497 ReadM SNP 0035.scaffold00136 514684 1 C A - ScafM SNP 0035.scaffold00136 514774 2 TC GT scaffold21497 Both INDEL 0035.scaffold00136 514865 1 G . scaffold21497 Both INDEL 0035.scaffold00136 514977 1 . T scaffold21497 Both SNP 0035.scaffold00136 515045 1 T C scaffold21497 Both SNP 0035.scaffold00136 515047 1 G C scaffold21497 Both SNP 0035.scaffold00136 515062 1 T A scaffold21497 Both SNP 0035.scaffold00136 515084 1 C A scaffold21497 Both SNP 0035.scaffold00136 515157 1 T C scaffold21497 Both SNP 0035.scaffold00136 515160 1 C A scaffold21497 Both SNP 0035.scaffold00136 515214 1 C T scaffold21497 Both SNP 0035.scaffold00136 515247 1 A T scaffold21497 Both SNP 0035.scaffold00136 515328 1 G A scaffold21497 ReadM SNP 0035.scaffold00136 515415 1 C A - Both SNP 0035.scaffold00136 515516 1 A C scaffold21497 Both SNP 0035.scaffold00136 515618 1 T G scaffold21497 ReadM SNP 0035.scaffold00136 515709 1 C A - ReadM SNP 0035.scaffold00136 515715 1 C A - ScafM SNP 0035.scaffold00136 515933 2 TA CG scaffold21497 ScafM SNP 0035.scaffold00136 515950 1 C G scaffold21497 ReadM SNP 0035.scaffold00136 517503 1 C A - ScafM INDEL 0035.scaffold00136 520256 1 . C scaffold21497 ScafM SNP 0035.scaffold00136 520288 1 A C scaffold21497 ScafM INDEL 0035.scaffold00136 520291 5 AAAAT ..... scaffold21497 ScafM SNP 0035.scaffold00136 520323 1 G A scaffold21497 ScafM SNP 0035.scaffold00136 520371 1 A C scaffold21497 ScafM SNP 0035.scaffold00136 520603 1 G A scaffold21497 ReadM SNP 0035.scaffold00136 520834 1 A G - ReadM SNP 0035.scaffold00136 520962 1 G A - ReadM SNP 0035.scaffold00136 521076 1 A T - ReadM SNP 0035.scaffold00136 521162 1 A T - ReadM SNP 0035.scaffold00136 521190 1 T G - Both INDEL 0035.scaffold00136 521253 1 . C scaffold21497 ScafM SNP 0035.scaffold00136 521266 1 A G scaffold21497 ScafM SNP 0035.scaffold00136 521268 1 T G scaffold21497 ReadM SNP 0035.scaffold00136 521593 1 G A - ReadM SNP 0035.scaffold00136 521649 1 T C - ScafM SNP 0035.scaffold00136 521787 1 A T scaffold21497 ScafM SNP 0035.scaffold00136 521808 1 T C scaffold21497 ScafM SNP 0035.scaffold00136 521852 1 G A scaffold21497 ScafM SNP 0035.scaffold00136 521959 1 A G scaffold21497 ScafM INDEL 0035.scaffold00136 522261 1 . A scaffold21497 Both SNP 0035.scaffold00136 522402 1 A G scaffold21497 Both SNP 0035.scaffold00136 522409 1 C G scaffold21497 ScafM INDEL 0035.scaffold00136 526870 1 . T scaffold18485 ScafM INDEL 0035.scaffold00136 526871 1 . T scaffold18485 ScafM SNP 0035.scaffold00136 526884 1 A G scaffold18485 ScafM INDEL 0035.scaffold00136 526895 2 TA .. scaffold18485 ScafM INDEL 0035.scaffold00136 526934 2 TC .. scaffold18485 ReadM INDEL 0035.scaffold00136 528765 1 . T - ReadM SNP 0035.scaffold00136 528801 1 G A - ReadM SNP 0035.scaffold00136 528849 1 C T - ReadM SNP 0035.scaffold00136 528908 1 C T - ReadM SNP 0035.scaffold00136 528953 1 C A - ReadM SNP 0035.scaffold00136 529063 1 C T - ReadM SNP 0035.scaffold00136 529379 1 C A - ReadM SNP 0035.scaffold00136 529433 1 G A - ReadM INDEL 0035.scaffold00136 532346 3 GAG ... - ScafM SNP 0035.scaffold00136 533224 1 G C scaffold2043 ScafM SNP 0035.scaffold00136 533227 1 C T scaffold2043 ScafM SNP 0035.scaffold00136 533244 1 A T scaffold2043 ScafM SNP 0035.scaffold00136 533264 1 C A scaffold2043 ScafM SNP 0035.scaffold00136 533273 1 G C scaffold2043 ScafM SNP 0035.scaffold00136 533276 1 C G scaffold2043 ScafM INDEL 0035.scaffold00136 537320 2 .. AG scaffold34201 ScafM SNP 0035.scaffold00136 537330 1 T A scaffold34201 ScafM SNP 0035.scaffold00136 537333 1 G A scaffold34201 ScafM SNP 0035.scaffold00136 537338 1 G C scaffold34201 ScafM INDEL 0035.scaffold00136 537345 1 . T scaffold34201 ScafM INDEL 0035.scaffold00136 537347 1 . T scaffold34201 ScafM INDEL 0035.scaffold00136 537351 5 ..... AACAC scaffold34201 ScafM SNP 0035.scaffold00136 537372 1 C A scaffold34201 ScafM SNP 0035.scaffold00136 537390 1 A G scaffold34201 ScafM SNP 0035.scaffold00136 537399 1 C T scaffold34201 ScafM INDEL 0035.scaffold00136 537420 1 G . scaffold34201 ScafM INDEL 0035.scaffold00136 537423 3 CAC ... scaffold34201 ScafM INDEL 0035.scaffold00136 537427 1 A . scaffold34201 ScafM INDEL 0035.scaffold00136 537429 7 TATTTAT ......C scaffold34201 ScafM INDEL 0035.scaffold00136 537451 7 ....... GGCTGGG scaffold34201 ScafM INDEL 0035.scaffold00136 537502 1 A . scaffold34201 ScafM SNP 0035.scaffold00136 537509 1 G A scaffold34201 ScafM SNP 0035.scaffold00136 537530 1 T A scaffold34201 ScafM SNP 0035.scaffold00136 537547 1 A C scaffold34201 ScafM INDEL 0035.scaffold00136 537586 5 ..... TCGCA scaffold34201 ScafM INDEL 0035.scaffold00136 537597 8 ........ TTAAATAA scaffold34201 ScafM SNP 0035.scaffold00136 537626 1 A C scaffold34201 ScafM SNP 0035.scaffold00136 537635 1 T A scaffold34201 ScafM SNP 0035.scaffold00136 537638 2 GC TA scaffold34201 ScafM SNP 0035.scaffold00136 537681 1 C A scaffold34201 ScafM SNP 0035.scaffold00136 537692 1 G T scaffold34201 ScafM SNP 0035.scaffold00136 537705 2 TA AT scaffold34201 ScafM SNP 0035.scaffold00136 537724 2 CG AC scaffold34201 ScafM INDEL 0035.scaffold00136 537744 11 ........... ATTGAAGAGAC scaffold34201 ScafM INDEL 0035.scaffold00136 537746 1 . T scaffold34201 ScafM SNP 0035.scaffold00136 537785 1 A C scaffold34201 ScafM SNP 0035.scaffold00136 538386 1 G C scaffold52862 ScafM SNP 0035.scaffold00136 538428 1 C T scaffold52862 ScafM SNP 0035.scaffold00136 538440 1 A G scaffold52862 ScafM SNP 0035.scaffold00136 538460 1 T A scaffold52862 ScafM INDEL 0035.scaffold00136 538487 2 .A TT scaffold52862 ScafM SNP 0035.scaffold00136 538503 2 AC CG scaffold52862 ScafM SNP 0035.scaffold00136 538510 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 538578 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 538586 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 538600 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538603 2 CT AA scaffold52862 ScafM INDEL 0035.scaffold00136 538623 1 . G scaffold52862 ScafM SNP 0035.scaffold00136 538628 1 T C scaffold52862 ScafM SNP 0035.scaffold00136 538639 1 A G scaffold52862 ScafM SNP 0035.scaffold00136 538671 1 G A scaffold52862 ScafM SNP 0035.scaffold00136 538693 1 T C scaffold52862 ScafM SNP 0035.scaffold00136 538698 1 G A scaffold52862 ScafM INDEL 0035.scaffold00136 538703 2 .. TG scaffold52862 ScafM SNP 0035.scaffold00136 538704 1 C G scaffold52862 ScafM INDEL 0035.scaffold00136 538707 2 .. TA scaffold52862 ScafM SNP 0035.scaffold00136 538709 2 CT AA scaffold52862 ScafM SNP 0035.scaffold00136 538715 4 ATAT CCTC scaffold52862 ScafM SNP 0035.scaffold00136 538720 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538725 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 538736 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 538740 1 T A scaffold52862 ScafM INDEL 0035.scaffold00136 538749 1 G . scaffold52862 ScafM SNP 0035.scaffold00136 538751 1 G A scaffold52862 ScafM SNP 0035.scaffold00136 538754 1 A C scaffold52862 ScafM SNP 0035.scaffold00136 538770 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 538788 2 TA AT scaffold52862 ScafM SNP 0035.scaffold00136 538806 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538835 1 T G scaffold52862 ScafM SNP 0035.scaffold00136 538847 1 G A scaffold52862 ScafM SNP 0035.scaffold00136 538856 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538860 1 G C scaffold52862 ScafM SNP 0035.scaffold00136 538866 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538873 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 538881 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 538889 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 538904 2 TG CA scaffold52862 ScafM SNP 0035.scaffold00136 538908 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 538910 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 538927 1 C T scaffold52862 ScafM INDEL 0035.scaffold00136 538938 1 C . scaffold52862 ScafM SNP 0035.scaffold00136 538941 1 G A scaffold52862 ScafM INDEL 0035.scaffold00136 538954 15 ............... AAGTCGTGTTGGTTT scaffold52862 ScafM SNP 0035.scaffold00136 538985 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 539004 1 G C scaffold52862 ScafM SNP 0035.scaffold00136 539014 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 539022 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 539036 1 A T scaffold52862 ScafM INDEL 0035.scaffold00136 539038 1 T . scaffold52862 ScafM SNP 0035.scaffold00136 539054 1 G C scaffold52862 ScafM SNP 0035.scaffold00136 539067 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 539084 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 539113 1 G T scaffold52862 ScafM SNP 0035.scaffold00136 539116 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 539150 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 539177 1 G A scaffold52862 ScafM SNP 0035.scaffold00136 539200 1 G A scaffold52862 ScafM SNP 0035.scaffold00136 539205 1 T C scaffold52862 ScafM SNP 0035.scaffold00136 539215 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 539230 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 539232 1 C T scaffold52862 ScafM INDEL 0035.scaffold00136 539236 2 .. TC scaffold52862 ScafM INDEL 0035.scaffold00136 539241 7 ....... AACTCGT scaffold52862 ScafM SNP 0035.scaffold00136 539245 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 539248 1 C T scaffold52862 ScafM SNP 0035.scaffold00136 539251 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 539288 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 539296 1 A G scaffold52862 ScafM INDEL 0035.scaffold00136 539301 1 . A scaffold52862 ScafM SNP 0035.scaffold00136 539320 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 539325 1 T A scaffold52862 ScafM SNP 0035.scaffold00136 539336 1 A C scaffold52862 ScafM SNP 0035.scaffold00136 539356 1 A G scaffold52862 ScafM SNP 0035.scaffold00136 539362 1 C G scaffold52862 ScafM SNP 0035.scaffold00136 539372 1 A T scaffold52862 ScafM SNP 0035.scaffold00136 539389 1 C A scaffold52862 ScafM SNP 0035.scaffold00136 539403 1 A G scaffold52862 ScafM SNP 0035.scaffold00136 541284 1 G A scaffold24248 ScafM INDEL 0035.scaffold00136 541286 1 C . scaffold24248 ScafM INDEL 0035.scaffold00136 541288 1 A . scaffold24248 ScafM SNP 0035.scaffold00136 541304 1 T G scaffold24248 ScafM SNP 0035.scaffold00136 541309 1 T A scaffold24248 ScafM SNP 0035.scaffold00136 541343 1 C T scaffold24248 ScafM SNP 0035.scaffold00136 541457 3 GTT AAC scaffold24248 ScafM SNP 0035.scaffold00136 541461 1 A G scaffold24248 ScafM INDEL 0035.scaffold00136 541462 3 ..A TGC scaffold24248 ScafM SNP 0035.scaffold00136 541490 1 T A scaffold24248 ScafM SNP 0035.scaffold00136 541531 1 A T scaffold24248 ScafM SNP 0035.scaffold00136 541544 1 C T scaffold24248 ScafM SNP 0035.scaffold00136 541558 1 A G scaffold24248 ScafM SNP 0035.scaffold00136 541578 1 T C scaffold24248 ScafM SNP 0035.scaffold00136 541581 1 T A scaffold24248 ScafM SNP 0035.scaffold00136 541638 1 T G scaffold24248 ScafM SNP 0035.scaffold00136 541797 1 T C scaffold24248 ScafM INDEL 0035.scaffold00136 541903 66 .................................................................. GTTACATACACTCGAACTCGAAGTTCCCTATAACGCGTCTTACACAACTTTGTGGATACGTAAAAG scaffold24248 ScafM SNP 0035.scaffold00136 541939 1 A T scaffold24248 ScafM SNP 0035.scaffold00136 541976 1 G A scaffold24248 ScafM SNP 0035.scaffold00136 542069 1 G C scaffold24248 ScafM SNP 0035.scaffold00136 542309 1 A G scaffold24248 ScafM SNP 0035.scaffold00136 542367 1 C A scaffold24248 ScafM SNP 0035.scaffold00136 542376 1 C A scaffold24248 ScafM SNP 0035.scaffold00136 542555 1 T A scaffold24248 ScafM SNP 0035.scaffold00136 542580 1 G C scaffold24248 ScafM SNP 0035.scaffold00136 542601 1 T G scaffold24248 ScafM SNP 0035.scaffold00136 542679 1 A C scaffold24248 ScafM SNP 0035.scaffold00136 542811 1 A C scaffold24248 ScafM INDEL 0035.scaffold00136 542887 5 ..... CAATT scaffold24248 ScafM INDEL 0035.scaffold00136 542890 18 .................. TGCTTCTTTCTTCTTCGT scaffold24248 ScafM SNP 0035.scaffold00136 546591 1 T C scaffold38960 ScafM SNP 0035.scaffold00136 546650 1 C A scaffold38960 ReadM SNP 0035.scaffold00136 547090 1 A G - ReadM SNP 0035.scaffold00136 547297 1 A G - ReadM SNP 0035.scaffold00136 547383 1 C T - ReadM SNP 0035.scaffold00136 547388 1 T A - ReadM SNP 0035.scaffold00136 549918 1 A C - ReadM SNP 0035.scaffold00136 550210 1 G T - ReadM SNP 0035.scaffold00136 550217 1 T C - ReadM SNP 0035.scaffold00136 550426 1 G A - ReadM SNP 0035.scaffold00136 550477 1 A C - ReadM SNP 0035.scaffold00136 550663 1 C A - ReadM SNP 0035.scaffold00136 550678 1 T C - ReadM SNP 0035.scaffold00136 550837 1 C T - ReadM SNP 0035.scaffold00136 550856 1 G A - ReadM SNP 0035.scaffold00136 550889 1 T C - ReadM SNP 0035.scaffold00136 550938 1 A G - ReadM SNP 0035.scaffold00136 551030 1 C T - ReadM SNP 0035.scaffold00136 551148 1 C G - ReadM SNP 0035.scaffold00136 551219 1 C T - ReadM SNP 0035.scaffold00136 551344 1 G A - ReadM SNP 0035.scaffold00136 551589 1 T C - ReadM SNP 0035.scaffold00136 551655 1 C A - ReadM SNP 0035.scaffold00136 551742 1 C T - ReadM INDEL 0035.scaffold00136 551753 1 . C - ReadM SNP 0035.scaffold00136 551879 1 A T - ReadM SNP 0035.scaffold00136 551897 1 A T - ReadM SNP 0035.scaffold00136 551915 1 G A - ReadM SNP 0035.scaffold00136 552208 1 G A - ReadM SNP 0035.scaffold00136 552211 1 G A - ReadM SNP 0035.scaffold00136 557199 1 T C - ReadM SNP 0035.scaffold00136 557694 1 A C - ReadM SNP 0035.scaffold00136 557743 1 T C - ReadM SNP 0035.scaffold00136 557960 1 A T - ReadM SNP 0035.scaffold00136 557999 1 C T - ReadM SNP 0035.scaffold00136 558088 1 C G - ReadM SNP 0035.scaffold00136 558160 1 C T - ReadM SNP 0035.scaffold00136 558169 1 A G - ReadM SNP 0035.scaffold00136 558184 1 G C - ReadM SNP 0035.scaffold00136 558245 1 G C - ReadM SNP 0035.scaffold00136 558294 1 A G - ReadM SNP 0035.scaffold00136 558315 1 C A - ReadM SNP 0035.scaffold00136 558421 1 A C - ReadM SNP 0035.scaffold00136 558436 1 T C - ReadM SNP 0035.scaffold00136 558522 1 T C - ReadM SNP 0035.scaffold00136 558541 1 A G - ReadM SNP 0035.scaffold00136 558601 1 A G - ReadM SNP 0035.scaffold00136 558756 1 G T - ReadM SNP 0035.scaffold00136 558909 1 T C - ReadM SNP 0035.scaffold00136 558924 1 A G - ReadM SNP 0035.scaffold00136 558970 1 T G - ReadM SNP 0035.scaffold00136 558993 1 A C - ReadM SNP 0035.scaffold00136 559010 1 T C - ReadM SNP 0035.scaffold00136 559086 1 A C - ReadM SNP 0035.scaffold00136 559096 1 C T - ReadM SNP 0035.scaffold00136 559132 1 G A - ReadM SNP 0035.scaffold00136 559337 1 T G - ReadM SNP 0035.scaffold00136 559379 1 T A - ReadM SNP 0035.scaffold00136 559460 1 T C - ReadM SNP 0035.scaffold00136 559506 1 C A - ReadM SNP 0035.scaffold00136 559558 1 G T - ReadM INDEL 0035.scaffold00136 559587 1 . A - ReadM SNP 0035.scaffold00136 559603 1 T C - ReadM SNP 0035.scaffold00136 559650 1 A G - ReadM INDEL 0035.scaffold00136 560104 1 T . - ReadM SNP 0035.scaffold00136 560132 1 G T - ReadM SNP 0035.scaffold00136 560173 1 G T - ReadM SNP 0035.scaffold00136 560231 1 A C - ReadM SNP 0035.scaffold00136 560529 1 A G - ReadM SNP 0035.scaffold00136 560634 1 T G - ReadM SNP 0035.scaffold00136 560675 1 C T - ScafM SNP 0035.scaffold00136 562142 1 G A scaffold5835 ScafM SNP 0035.scaffold00136 562167 1 G A scaffold5835 ScafM SNP 0035.scaffold00136 562170 2 AG TA scaffold5835 ScafM SNP 0035.scaffold00136 562189 1 G T scaffold5835 ScafM INDEL 0035.scaffold00136 562198 1 A . scaffold5835 ScafM SNP 0035.scaffold00136 562219 1 T A scaffold5835 ScafM SNP 0035.scaffold00136 562237 1 A C scaffold5835 ScafM SNP 0035.scaffold00136 562239 1 C A scaffold5835 ScafM INDEL 0035.scaffold00136 562244 1 A . scaffold5835 ScafM INDEL 0035.scaffold00136 562248 1 . C scaffold5835 ScafM SNP 0035.scaffold00136 562250 1 G A scaffold5835 ScafM SNP 0035.scaffold00136 562266 1 T C scaffold5835 ScafM SNP 0035.scaffold00136 562270 1 T C scaffold5835 ScafM SNP 0035.scaffold00136 562274 1 C T scaffold5835 ScafM SNP 0035.scaffold00136 562296 1 T C scaffold5835 ScafM SNP 0035.scaffold00136 562322 1 G A scaffold5835 ScafM SNP 0035.scaffold00136 566405 1 G C scaffold11860 ScafM SNP 0035.scaffold00136 566412 1 G A scaffold11860 ScafM SNP 0035.scaffold00136 566420 1 G C scaffold11860 ScafM SNP 0035.scaffold00136 566531 1 T C scaffold11860 ScafM SNP 0035.scaffold00136 566568 1 T C scaffold11860 ScafM SNP 0035.scaffold00136 566659 1 G A scaffold11860 ScafM SNP 0035.scaffold00136 566865 1 C A scaffold4333 ScafM SNP 0035.scaffold00136 566956 1 A T scaffold4333 ReadM SNP 0035.scaffold00136 567129 1 A T - ReadM SNP 0035.scaffold00136 567226 1 C T - ReadM INDEL 0035.scaffold00136 567400 1 . T - ReadM SNP 0035.scaffold00136 567663 1 C A - ReadM SNP 0035.scaffold00136 567705 1 T C - ReadM SNP 0035.scaffold00136 567755 1 C A - ReadM SNP 0035.scaffold00136 567764 1 C T - ReadM SNP 0035.scaffold00136 567898 1 G A - ReadM SNP 0035.scaffold00136 567917 1 A G - ReadM SNP 0035.scaffold00136 567940 1 G A - ReadM SNP 0035.scaffold00136 568021 1 A C - ReadM SNP 0035.scaffold00136 568195 1 G A - ReadM SNP 0035.scaffold00136 568444 1 G A - ReadM INDEL 0035.scaffold00136 568461 1 C . - ReadM SNP 0035.scaffold00136 568498 1 T C - ReadM SNP 0035.scaffold00136 568584 1 C T - ReadM SNP 0035.scaffold00136 568587 1 C G - ReadM SNP 0035.scaffold00136 568635 1 A C - ReadM SNP 0035.scaffold00136 568643 1 T C - ReadM SNP 0035.scaffold00136 568691 1 C A - ReadM SNP 0035.scaffold00136 568724 1 T C - ReadM SNP 0035.scaffold00136 568975 1 T C - ReadM SNP 0035.scaffold00136 568985 1 G A - ReadM SNP 0035.scaffold00136 569094 1 A C - ReadM SNP 0035.scaffold00136 569116 1 T G - ReadM SNP 0035.scaffold00136 569146 1 T C - ReadM SNP 0035.scaffold00136 569303 1 C G - ReadM SNP 0035.scaffold00136 569383 1 C T - ReadM SNP 0035.scaffold00136 569414 1 T C - ReadM SNP 0035.scaffold00136 569433 1 G A - ReadM SNP 0035.scaffold00136 569485 1 A C - ReadM SNP 0035.scaffold00136 569561 1 G C - ReadM SNP 0035.scaffold00136 569620 1 A C - ReadM SNP 0035.scaffold00136 569779 1 G A - ReadM SNP 0035.scaffold00136 569821 1 T G - ReadM SNP 0035.scaffold00136 569850 1 A G - ReadM SNP 0035.scaffold00136 569855 1 A G - ReadM SNP 0035.scaffold00136 569894 1 G C - ReadM SNP 0035.scaffold00136 569946 2 AC TT - ReadM SNP 0035.scaffold00136 569998 1 C T - ReadM SNP 0035.scaffold00136 570179 1 T C - ReadM SNP 0035.scaffold00136 570253 1 A C - ReadM SNP 0035.scaffold00136 570367 1 G A - ReadM SNP 0035.scaffold00136 570418 1 C T - ReadM SNP 0035.scaffold00136 570684 1 T G - ReadM SNP 0035.scaffold00136 570724 1 T C - ReadM SNP 0035.scaffold00136 570811 1 G C - ReadM SNP 0035.scaffold00136 570836 1 A G - ReadM SNP 0035.scaffold00136 570892 1 T C - ReadM SNP 0035.scaffold00136 570911 1 T G - ReadM SNP 0035.scaffold00136 571082 1 C A - ReadM SNP 0035.scaffold00136 571176 1 T A - ReadM SNP 0035.scaffold00136 571418 1 A G - ReadM SNP 0035.scaffold00136 571452 1 G C - ReadM SNP 0035.scaffold00136 571516 1 G A - ReadM SNP 0035.scaffold00136 571529 1 G A - ReadM SNP 0035.scaffold00136 571653 1 A T - ReadM SNP 0035.scaffold00136 571657 1 G A - ReadM SNP 0035.scaffold00136 571688 1 G A - ReadM SNP 0035.scaffold00136 571995 1 T C - ReadM SNP 0035.scaffold00136 572005 1 G T - ReadM SNP 0035.scaffold00136 572016 1 A T - ReadM SNP 0035.scaffold00136 572135 1 A G - ReadM SNP 0035.scaffold00136 572146 1 C G - ReadM SNP 0035.scaffold00136 572172 1 G A - ReadM SNP 0035.scaffold00136 572243 1 G T - ReadM SNP 0035.scaffold00136 572289 1 T G - ReadM SNP 0035.scaffold00136 572352 1 A G - ReadM SNP 0035.scaffold00136 572417 1 C G - ReadM SNP 0035.scaffold00136 572701 1 G C - ReadM SNP 0035.scaffold00136 572728 1 A T - ReadM SNP 0035.scaffold00136 572743 1 C G - ReadM SNP 0035.scaffold00136 572802 1 C T - ReadM SNP 0035.scaffold00136 572919 1 A G - ReadM SNP 0035.scaffold00136 572963 1 T G - ReadM SNP 0035.scaffold00136 573168 1 T C - Both SNP 0035.scaffold00136 573272 1 C T scaffold4333 Both SNP 0035.scaffold00136 573303 1 A G scaffold4333 Both SNP 0035.scaffold00136 573327 1 C A scaffold4333 Both SNP 0035.scaffold00136 573347 1 C G scaffold4333 Both SNP 0035.scaffold00136 573373 1 C G scaffold4333 ScafM SNP 0035.scaffold00136 573456 1 T G scaffold4333 Both INDEL 0035.scaffold00136 573463 1 A . scaffold4333 Both SNP 0035.scaffold00136 573477 1 T C scaffold4333 ScafM SNP 0035.scaffold00136 573584 2 GA AT scaffold4333 ScafM INDEL 0035.scaffold00136 573608 1 T . scaffold4333 ScafM SNP 0035.scaffold00136 573612 1 A T scaffold4333 ScafM SNP 0035.scaffold00136 573653 1 T G scaffold4333 ScafM SNP 0035.scaffold00136 573683 1 C T scaffold4333 ScafM SNP 0035.scaffold00136 573688 1 T G scaffold4333 ReadM SNP 0035.scaffold00136 573858 1 T C - Both SNP 0035.scaffold00136 573880 1 G A scaffold4333 Both SNP 0035.scaffold00136 573910 1 G A scaffold4333 ScafM INDEL 0035.scaffold00136 573976 1 T . scaffold4333 ScafM INDEL 0035.scaffold00136 573982 1 . T scaffold4333 ScafM SNP 0035.scaffold00136 574945 1 C T scaffold4333 ScafM SNP 0035.scaffold00136 574960 1 A G scaffold4333 ScafM SNP 0035.scaffold00136 574977 1 G A scaffold4333 ScafM INDEL 0035.scaffold00136 575008 1 . C scaffold4333 ScafM SNP 0035.scaffold00136 575019 1 C T scaffold4333 ScafM INDEL 0035.scaffold00136 575060 1 . A scaffold4333 ScafM SNP 0035.scaffold00136 575067 1 C A scaffold4333 ScafM SNP 0035.scaffold00136 575444 1 T A scaffold4333 ScafM SNP 0035.scaffold00136 575973 1 G A scaffold4333 ScafM SNP 0035.scaffold00136 576021 1 G C scaffold4333 ReadM SNP 0035.scaffold00136 576132 1 G C - ScafM INDEL 0035.scaffold00136 576371 4 AGTT .... scaffold4333 ReadM SNP 0035.scaffold00136 576518 1 T A - ReadM SNP 0035.scaffold00136 576872 1 G A - ReadM SNP 0035.scaffold00136 576909 1 A T - ReadM INDEL 0035.scaffold00136 577079 2 AT .. - ReadM SNP 0035.scaffold00136 577188 1 T G - ReadM SNP 0035.scaffold00136 577237 1 G A - ReadM SNP 0035.scaffold00136 577307 1 T G - ReadM SNP 0035.scaffold00136 577314 1 T A - ReadM SNP 0035.scaffold00136 577363 1 T A - ReadM INDEL 0035.scaffold00136 577469 1 . C - ReadM SNP 0035.scaffold00136 577475 1 T C - ReadM SNP 0035.scaffold00136 577554 1 T C - ScafM SNP 0035.scaffold00136 577695 1 G A scaffold42256 ScafM SNP 0035.scaffold00136 577727 1 G A scaffold42256 ScafM INDEL 0035.scaffold00136 577744 3 TCA ... scaffold42256 Both SNP 0035.scaffold00136 577815 1 G A scaffold42256 ReadM SNP 0035.scaffold00136 577847 1 A C - ReadM SNP 0035.scaffold00136 577961 1 C T - ReadM SNP 0035.scaffold00136 577983 1 C G - Both SNP 0035.scaffold00136 578084 1 A G scaffold42256 Both INDEL 0035.scaffold00136 578134 1 A . scaffold42256 Both SNP 0035.scaffold00136 578142 1 C G scaffold42256 ScafM SNP 0035.scaffold00136 578179 1 G T scaffold42256 ScafM INDEL 0035.scaffold00136 578208 10 .......... GAGAGAGAGA scaffold42256 ScafM SNP 0035.scaffold00136 578210 1 T A scaffold42256 ScafM SNP 0035.scaffold00136 578294 2 AC TA scaffold42256 Both SNP 0035.scaffold00136 578401 1 C G scaffold42256 ScafM SNP 0035.scaffold00136 578413 1 C T scaffold42256 ScafM SNP 0035.scaffold00136 578415 1 G A scaffold42256 ScafM SNP 0035.scaffold00136 578444 1 C G scaffold42256 ScafM SNP 0035.scaffold00136 578456 1 G A scaffold42256 ScafM INDEL 0035.scaffold00136 578481 2 TT .. scaffold42256 ScafM SNP 0035.scaffold00136 578494 1 A G scaffold42256 Both SNP 0035.scaffold00136 578554 1 A G scaffold42256 ReadM SNP 0035.scaffold00136 578578 1 G A - ReadM SNP 0035.scaffold00136 578588 1 C T - Both SNP 0035.scaffold00136 578650 1 G A scaffold42256 Both SNP 0035.scaffold00136 578670 1 T C scaffold42256 Both SNP 0035.scaffold00136 578697 1 G T scaffold42256 ScafM SNP 0035.scaffold00136 578718 1 A T scaffold42256 ScafM SNP 0035.scaffold00136 578722 1 A G scaffold42256 ScafM SNP 0035.scaffold00136 578752 1 A T scaffold42256 Both SNP 0035.scaffold00136 578766 1 G C scaffold42256 ScafM SNP 0035.scaffold00136 578816 2 AC CT scaffold42256 ReadM SNP 0035.scaffold00136 578886 1 A C - ReadM SNP 0035.scaffold00136 579016 1 C A - ReadM INDEL 0035.scaffold00136 579055 1 T . - ReadM SNP 0035.scaffold00136 579288 1 G A - ReadM SNP 0035.scaffold00136 579334 1 T G - ReadM SNP 0035.scaffold00136 579347 1 G A - ReadM SNP 0035.scaffold00136 579402 1 T C - ReadM SNP 0035.scaffold00136 579418 1 A G - ScafM SNP 0035.scaffold00136 579730 1 T A scaffold42256 Both SNP 0035.scaffold00136 579781 1 G C scaffold42256 Both SNP 0035.scaffold00136 579788 1 T A scaffold42256 ReadM SNP 0035.scaffold00136 580171 1 G A - ReadM SNP 0035.scaffold00136 580234 1 A G - ReadM SNP 0035.scaffold00136 580396 1 A G - ReadM SNP 0035.scaffold00136 580432 1 G A - ReadM SNP 0035.scaffold00136 580457 1 G T - ReadM SNP 0035.scaffold00136 580487 1 C T - ReadM SNP 0035.scaffold00136 580558 1 A G - ReadM SNP 0035.scaffold00136 580575 1 C T - Both SNP 0035.scaffold00136 580619 1 A G scaffold42256 ScafM INDEL 0035.scaffold00136 580645 1 T . scaffold42256 ScafM SNP 0035.scaffold00136 580655 1 T C scaffold42256 ScafM SNP 0035.scaffold00136 580671 1 C T scaffold42256 Both SNP 0035.scaffold00136 580709 1 G C scaffold42256 Both SNP 0035.scaffold00136 580734 1 C T scaffold42256 Both SNP 0035.scaffold00136 580765 1 G T scaffold42256 ReadM SNP 0035.scaffold00136 580813 1 C G - ReadM SNP 0035.scaffold00136 580843 1 C G - ReadM SNP 0035.scaffold00136 580966 1 A G - ReadM SNP 0035.scaffold00136 580996 1 G C - ReadM SNP 0035.scaffold00136 581076 1 G A - ReadM SNP 0035.scaffold00136 581240 1 T C - ReadM SNP 0035.scaffold00136 581248 1 G T - ReadM SNP 0035.scaffold00136 581379 1 A G - ReadM SNP 0035.scaffold00136 581402 1 C A - ReadM SNP 0035.scaffold00136 581443 1 A G - ReadM SNP 0035.scaffold00136 581464 1 T G - ReadM SNP 0035.scaffold00136 581513 1 T G - ReadM SNP 0035.scaffold00136 581659 1 T C - ReadM SNP 0035.scaffold00136 581749 1 C T - ReadM SNP 0035.scaffold00136 581760 1 A G - Both SNP 0035.scaffold00136 581899 1 G A scaffold42256 ScafM SNP 0035.scaffold00136 581913 1 G A scaffold42256 Both SNP 0035.scaffold00136 582003 1 T A scaffold42256 Both SNP 0035.scaffold00136 582036 1 A G scaffold42256 Both SNP 0035.scaffold00136 582056 1 A G scaffold42256 Both SNP 0035.scaffold00136 582082 1 C G scaffold42256 ScafM INDEL 0035.scaffold00136 582133 4 CGCT .... scaffold42256 ScafM SNP 0035.scaffold00136 582161 2 CT TC scaffold42256 ScafM SNP 0035.scaffold00136 582175 1 A G scaffold42256 Both SNP 0035.scaffold00136 582223 1 T C scaffold42256 Both SNP 0035.scaffold00136 582292 1 A C scaffold42256 Both SNP 0035.scaffold00136 582314 1 C T scaffold42256 ReadM SNP 0035.scaffold00136 582339 1 T C - ReadM SNP 0035.scaffold00136 582391 1 A T - ReadM SNP 0035.scaffold00136 582573 1 T C - ReadM SNP 0035.scaffold00136 582704 1 C T - ReadM SNP 0035.scaffold00136 583048 1 G C - ReadM INDEL 0035.scaffold00136 583064 1 A . - ReadM SNP 0035.scaffold00136 583107 1 C G - ReadM SNP 0035.scaffold00136 583179 1 T C - ReadM SNP 0035.scaffold00136 583225 1 T C - ReadM INDEL 0035.scaffold00136 583303 2 .. TA - ReadM SNP 0035.scaffold00136 583326 1 C T - ReadM INDEL 0035.scaffold00136 583475 1 . G - ReadM SNP 0035.scaffold00136 583521 1 A G - ReadM SNP 0035.scaffold00136 583741 1 C G - ReadM SNP 0035.scaffold00136 583747 1 G A - ReadM SNP 0035.scaffold00136 583788 1 A G - ReadM INDEL 0035.scaffold00136 583878 1 . A - Both SNP 0035.scaffold00136 583901 1 A T scaffold42256 ScafM SNP 0035.scaffold00136 583909 1 C A scaffold42256 Both SNP 0035.scaffold00136 584026 1 A G scaffold42256 Both SNP 0035.scaffold00136 584031 1 G A scaffold42256 Both SNP 0035.scaffold00136 584144 1 A G scaffold42256 Both SNP 0035.scaffold00136 584150 1 T G scaffold42256 ScafM SNP 0035.scaffold00136 584172 1 A T scaffold42256 ScafM SNP 0035.scaffold00136 584177 1 C T scaffold42256 ScafM SNP 0035.scaffold00136 584188 1 G A scaffold42256 ScafM SNP 0035.scaffold00136 584231 1 A G scaffold42256 ScafM SNP 0035.scaffold00136 584234 2 TG GA scaffold42256 ScafM SNP 0035.scaffold00136 584271 1 A T scaffold42256 Both SNP 0035.scaffold00136 584291 1 A G scaffold42256 ScafM SNP 0035.scaffold00136 584345 1 A G scaffold42256 ScafM SNP 0035.scaffold00136 584371 1 T C scaffold42256 ScafM SNP 0035.scaffold00136 584406 1 T C scaffold42256 ScafM SNP 0035.scaffold00136 584440 1 C G scaffold42256 ReadM SNP 0035.scaffold00136 584970 1 G C - ScafM SNP 0035.scaffold00136 585320 1 T C C19694023 ScafM INDEL 0035.scaffold00136 585357 1 . T C19694023 ScafM SNP 0035.scaffold00136 585368 1 T C C19694023 Both SNP 0035.scaffold00136 585410 1 G A C19694023 Both SNP 0035.scaffold00136 585468 1 G A C19694023 ScafM SNP 0035.scaffold00136 585578 1 T A C19694023 ScafM SNP 0035.scaffold00136 585581 1 A C C19694023 ScafM SNP 0035.scaffold00136 585593 1 A C C19694023 Both SNP 0035.scaffold00136 585753 1 A C C19694023 Both SNP 0035.scaffold00136 585782 1 A T C19694023 ReadM SNP 0035.scaffold00136 585831 1 A G - ReadM SNP 0035.scaffold00136 585905 1 A C - ReadM SNP 0035.scaffold00136 585939 1 A G - ReadM SNP 0035.scaffold00136 585953 1 A C - ReadM SNP 0035.scaffold00136 585975 1 T A - ReadM SNP 0035.scaffold00136 586046 1 G A - ReadM SNP 0035.scaffold00136 586048 1 T C - ReadM SNP 0035.scaffold00136 586275 1 G A - ReadM SNP 0035.scaffold00136 586280 1 A G - ReadM SNP 0035.scaffold00136 586406 1 T C - ReadM SNP 0035.scaffold00136 586408 1 T C - ReadM SNP 0035.scaffold00136 586415 1 C A - ReadM SNP 0035.scaffold00136 586550 1 T G - ReadM SNP 0035.scaffold00136 586565 1 C G - ReadM SNP 0035.scaffold00136 586607 1 T C - ReadM SNP 0035.scaffold00136 586714 1 G A - ReadM SNP 0035.scaffold00136 586804 1 T C - ReadM SNP 0035.scaffold00136 586839 1 C A - ReadM SNP 0035.scaffold00136 587039 1 C G - ReadM SNP 0035.scaffold00136 587066 1 A G - ReadM SNP 0035.scaffold00136 587128 1 T C - ReadM SNP 0035.scaffold00136 587143 1 A G - Both SNP 0035.scaffold00136 587373 1 G C scaffold73064 Both SNP 0035.scaffold00136 587398 1 A G scaffold73064 Both SNP 0035.scaffold00136 587414 1 C T scaffold73064 ScafM SNP 0035.scaffold00136 587511 2 CT TG scaffold73064 ScafM SNP 0035.scaffold00136 587526 1 C G scaffold73064 Both SNP 0035.scaffold00136 587570 1 C T scaffold73064 ReadM INDEL 0035.scaffold00136 587589 1 . A - ScafM INDEL 0035.scaffold00136 587595 13 ............. ATCGAATTGCATT scaffold73064 ReadM SNP 0035.scaffold00136 587598 1 T G - ScafM INDEL 0035.scaffold00136 587598 16 ................ TAAGAAAAAAAAATCG scaffold73064 ScafM SNP 0035.scaffold00136 587635 1 T C scaffold73064 ReadM INDEL 0035.scaffold00136 587668 1 . T - ReadM SNP 0035.scaffold00136 587763 1 C A - ReadM INDEL 0035.scaffold00136 587783 1 A . - ReadM SNP 0035.scaffold00136 587970 1 A G - ReadM SNP 0035.scaffold00136 587982 1 G A - ReadM SNP 0035.scaffold00136 588076 1 C G - ReadM SNP 0035.scaffold00136 588134 1 A T - ReadM SNP 0035.scaffold00136 588144 1 T A - ScafM SNP 0035.scaffold00136 588312 1 G C scaffold59152 ScafM SNP 0035.scaffold00136 588314 1 G T scaffold59152 ScafM SNP 0035.scaffold00136 588418 1 T C scaffold59152 ScafM SNP 0035.scaffold00136 588430 1 A G scaffold59152 ScafM SNP 0035.scaffold00136 588432 1 T C scaffold59152 ScafM SNP 0035.scaffold00136 588453 1 A C scaffold59152 ScafM SNP 0035.scaffold00136 588497 1 A G scaffold59152 ScafM SNP 0035.scaffold00136 588549 1 A T scaffold59152 ScafM SNP 0035.scaffold00136 588557 1 G C scaffold59152 ScafM SNP 0035.scaffold00136 588568 1 A C scaffold59152 ScafM SNP 0035.scaffold00136 588602 1 T C scaffold59152 ReadM SNP 0035.scaffold00136 588761 1 T A - ScafM INDEL 0035.scaffold00136 589484 1 T . scaffold59152 ScafM SNP 0035.scaffold00136 589503 1 T C scaffold59152 ReadM SNP 0035.scaffold00136 598646 1 T A - ReadM SNP 0035.scaffold00136 598694 1 A T - ReadM SNP 0035.scaffold00136 598939 1 C T - ReadM SNP 0035.scaffold00136 599012 1 T A - ReadM SNP 0035.scaffold00136 599077 1 G A - ReadM SNP 0035.scaffold00136 599089 1 A G - ReadM SNP 0035.scaffold00136 599110 1 G A - ReadM SNP 0035.scaffold00136 599230 1 C T - ReadM SNP 0035.scaffold00136 599240 1 A C - ReadM SNP 0035.scaffold00136 599264 1 T C - ReadM SNP 0035.scaffold00136 599323 1 C T - ReadM SNP 0035.scaffold00136 599402 1 A G - ReadM SNP 0035.scaffold00136 599411 1 C T - ReadM SNP 0035.scaffold00136 599452 1 C T - ReadM SNP 0035.scaffold00136 599680 1 G C - ReadM SNP 0035.scaffold00136 599762 1 G A - ReadM INDEL 0035.scaffold00136 599789 1 G . - ReadM SNP 0035.scaffold00136 599841 1 C A - ReadM SNP 0035.scaffold00136 599852 1 G A - ReadM SNP 0035.scaffold00136 599862 1 A C - ReadM SNP 0035.scaffold00136 599941 1 C T - ReadM SNP 0035.scaffold00136 599969 1 C T - ReadM SNP 0035.scaffold00136 600148 1 G A - ReadM SNP 0035.scaffold00136 600192 1 C G - ReadM SNP 0035.scaffold00136 600443 1 T G - ReadM SNP 0035.scaffold00136 600491 1 G A - ReadM SNP 0035.scaffold00136 600515 1 T C - ReadM SNP 0035.scaffold00136 600630 1 C T - ReadM SNP 0035.scaffold00136 600723 1 T G - ReadM SNP 0035.scaffold00136 600802 1 C T - ReadM SNP 0035.scaffold00136 600804 1 C G - ReadM SNP 0035.scaffold00136 600911 1 C T - ReadM SNP 0035.scaffold00136 601205 1 A G - ReadM SNP 0035.scaffold00136 601227 1 A C - ReadM SNP 0035.scaffold00136 601315 1 T G - ReadM SNP 0035.scaffold00136 601822 1 T A - ReadM SNP 0035.scaffold00136 601824 1 G A - ReadM SNP 0035.scaffold00136 601880 1 G A - ReadM SNP 0035.scaffold00136 601952 1 T C - ReadM SNP 0035.scaffold00136 601956 1 A C - ReadM SNP 0035.scaffold00136 601968 1 T C - ReadM SNP 0035.scaffold00136 602057 1 T C - ReadM SNP 0035.scaffold00136 602078 1 A T - ReadM SNP 0035.scaffold00136 602081 1 C T - ReadM SNP 0035.scaffold00136 602193 1 G T - ReadM SNP 0035.scaffold00136 602253 1 C T - ReadM SNP 0035.scaffold00136 602375 1 C T - ReadM SNP 0035.scaffold00136 602462 1 C A - ReadM INDEL 0035.scaffold00136 602509 1 . T - ReadM SNP 0035.scaffold00136 602555 1 C A - ReadM SNP 0035.scaffold00136 602593 1 A G - ReadM SNP 0035.scaffold00136 602631 1 G A - ReadM SNP 0035.scaffold00136 602648 1 C A - ReadM SNP 0035.scaffold00136 602751 1 G A - ReadM SNP 0035.scaffold00136 602755 1 C T - ReadM SNP 0035.scaffold00136 602845 1 T C - ScafM SNP 0035.scaffold00136 603025 1 C G scaffold21435 ScafM INDEL 0035.scaffold00136 603051 2 TC .. scaffold21435 ScafM SNP 0035.scaffold00136 603059 1 C T scaffold21435 ScafM SNP 0035.scaffold00136 603063 1 C G scaffold21435 ScafM SNP 0035.scaffold00136 603105 1 T G scaffold21435 ScafM SNP 0035.scaffold00136 603172 1 T C scaffold21435 ScafM SNP 0035.scaffold00136 603174 1 G A scaffold21435 ScafM SNP 0035.scaffold00136 603231 1 T A scaffold21435 ScafM SNP 0035.scaffold00136 603250 1 T C scaffold21435 ScafM INDEL 0035.scaffold00136 603265 1 . T scaffold21435 ScafM SNP 0035.scaffold00136 603281 1 T C scaffold21435 ScafM SNP 0035.scaffold00136 603296 1 T C scaffold21435 ScafM SNP 0035.scaffold00136 603546 1 G A scaffold21435 ScafM SNP 0035.scaffold00136 603552 1 G C scaffold21435 ReadM SNP 0035.scaffold00136 604368 1 A G - ReadM SNP 0035.scaffold00136 604437 1 G A - ReadM SNP 0035.scaffold00136 604780 1 G C - ReadM SNP 0035.scaffold00136 604792 1 T C - ReadM SNP 0035.scaffold00136 604904 1 A G - ReadM INDEL 0035.scaffold00136 604986 1 . T - ReadM SNP 0035.scaffold00136 605033 1 C T - ReadM SNP 0035.scaffold00136 605231 1 C T - ReadM SNP 0035.scaffold00136 605404 1 T C - ReadM SNP 0035.scaffold00136 605550 1 G A - ReadM SNP 0035.scaffold00136 605571 1 G A - Both SNP 0035.scaffold00136 605656 1 A T scaffold5859 Both SNP 0035.scaffold00136 605669 1 A T scaffold5859 ScafM SNP 0035.scaffold00136 605773 1 C T scaffold5859 Both SNP 0035.scaffold00136 605786 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 605839 2 TG AT scaffold5859 Both SNP 0035.scaffold00136 605940 1 G A scaffold5859 Both SNP 0035.scaffold00136 606005 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 606029 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 606031 1 A T scaffold5859 ScafM SNP 0035.scaffold00136 606050 1 T C scaffold5859 Both SNP 0035.scaffold00136 606079 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 606081 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 606188 1 C T scaffold5859 Both INDEL 0035.scaffold00136 606191 2 .. TG scaffold5859 Both SNP 0035.scaffold00136 606275 1 G A scaffold5859 Both SNP 0035.scaffold00136 606280 1 C T scaffold5859 Both SNP 0035.scaffold00136 606284 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 606389 2 AC GT scaffold5859 ScafM SNP 0035.scaffold00136 606463 1 C A scaffold5859 ScafM INDEL 0035.scaffold00136 606471 2 .. AA scaffold5859 ScafM SNP 0035.scaffold00136 606515 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 606551 1 T G scaffold5859 ScafM SNP 0035.scaffold00136 606567 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 606603 1 T A scaffold5859 Both SNP 0035.scaffold00136 606686 1 T C scaffold5859 Both SNP 0035.scaffold00136 606698 1 C A scaffold5859 Both INDEL 0035.scaffold00136 606732 1 A . scaffold5859 Both SNP 0035.scaffold00136 606759 1 C A scaffold5859 ScafM INDEL 0035.scaffold00136 606920 2 AG .. scaffold5859 ScafM INDEL 0035.scaffold00136 606950 2 .. AT scaffold5859 ScafM INDEL 0035.scaffold00136 606956 3 TGA ... scaffold5859 ScafM INDEL 0035.scaffold00136 607029 1 . C scaffold5859 ScafM SNP 0035.scaffold00136 607059 1 T A scaffold5859 ReadM SNP 0035.scaffold00136 607227 1 A G - ReadM SNP 0035.scaffold00136 607289 1 A G - ReadM SNP 0035.scaffold00136 607308 1 G A - ScafM SNP 0035.scaffold00136 607595 1 G A scaffold5859 Both SNP 0035.scaffold00136 607663 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 607675 1 C T scaffold5859 ReadM SNP 0035.scaffold00136 607796 1 T C - ReadM SNP 0035.scaffold00136 607807 1 T C - ScafM SNP 0035.scaffold00136 607956 1 T A scaffold5859 Both INDEL 0035.scaffold00136 607959 1 A . scaffold5859 Both SNP 0035.scaffold00136 608088 1 G A scaffold5859 Both SNP 0035.scaffold00136 608188 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 608217 1 G C scaffold5859 ScafM SNP 0035.scaffold00136 608224 1 A C scaffold5859 ScafM SNP 0035.scaffold00136 608233 1 C T scaffold5859 ScafM INDEL 0035.scaffold00136 608406 1 . T scaffold5859 ScafM SNP 0035.scaffold00136 608465 1 C G scaffold5859 ScafM SNP 0035.scaffold00136 608510 1 C A scaffold5859 ScafM INDEL 0035.scaffold00136 608520 6 ...... GGGGGC scaffold5859 ScafM SNP 0035.scaffold00136 608558 1 A T scaffold5859 ScafM SNP 0035.scaffold00136 608898 2 CA AG scaffold5859 ScafM SNP 0035.scaffold00136 608906 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 608936 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 608958 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 609077 1 T G scaffold5859 ScafM SNP 0035.scaffold00136 609167 1 G T scaffold5859 ScafM INDEL 0035.scaffold00136 609320 4 TATA .... scaffold5859 ScafM SNP 0035.scaffold00136 609325 1 A C scaffold5859 Both SNP 0035.scaffold00136 609381 1 C T scaffold5859 ReadM SNP 0035.scaffold00136 609444 1 C G - ReadM SNP 0035.scaffold00136 609455 1 G A - Both SNP 0035.scaffold00136 609611 1 G A scaffold5859 Both SNP 0035.scaffold00136 609613 1 G C scaffold5859 ScafM INDEL 0035.scaffold00136 609625 9 ......... CAAACTCTT scaffold5859 ScafM SNP 0035.scaffold00136 609768 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 609782 1 A T scaffold5859 ScafM INDEL 0035.scaffold00136 609789 2 TA .. scaffold5859 Both SNP 0035.scaffold00136 610085 1 A T scaffold5859 Both SNP 0035.scaffold00136 610120 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 610170 1 G A scaffold5859 Both SNP 0035.scaffold00136 610187 1 T C scaffold5859 Both SNP 0035.scaffold00136 610201 1 T C scaffold5859 Both SNP 0035.scaffold00136 610328 1 T A scaffold5859 Both SNP 0035.scaffold00136 610367 1 A G scaffold5859 ReadM SNP 0035.scaffold00136 610517 1 T A - ReadM SNP 0035.scaffold00136 610582 1 G A - ScafM SNP 0035.scaffold00136 610601 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 610606 1 C A scaffold5859 ScafM SNP 0035.scaffold00136 610644 2 GC AT scaffold5859 ScafM SNP 0035.scaffold00136 610656 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 610659 1 G A scaffold5859 Both SNP 0035.scaffold00136 610681 1 G A scaffold5859 Both SNP 0035.scaffold00136 610745 1 T A scaffold5859 Both SNP 0035.scaffold00136 610777 1 T A scaffold5859 Both SNP 0035.scaffold00136 610793 1 A T scaffold5859 Both SNP 0035.scaffold00136 610822 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 610868 1 G C scaffold5859 ScafM SNP 0035.scaffold00136 610882 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 610914 1 A C scaffold5859 ScafM SNP 0035.scaffold00136 610935 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 610945 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 610949 1 A G scaffold5859 ScafM INDEL 0035.scaffold00136 610975 1 T . scaffold5859 ScafM SNP 0035.scaffold00136 610977 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 610988 1 G T scaffold5859 ReadM SNP 0035.scaffold00136 611234 1 T C - ReadM SNP 0035.scaffold00136 611271 1 A G - ReadM SNP 0035.scaffold00136 611289 1 T G - ReadM SNP 0035.scaffold00136 611451 1 A C - Both SNP 0035.scaffold00136 611517 1 T C scaffold5859 ScafM INDEL 0035.scaffold00136 611584 5 GCTCG ....A scaffold5859 Both SNP 0035.scaffold00136 611716 1 A T scaffold5859 Both SNP 0035.scaffold00136 611800 1 G C scaffold5859 ScafM INDEL 0035.scaffold00136 611838 20 CAGCTATAAACATGCAGCTA .................... scaffold5859 ScafM SNP 0035.scaffold00136 611896 1 A G scaffold5859 Both SNP 0035.scaffold00136 611916 1 C T scaffold5859 Both SNP 0035.scaffold00136 612150 1 G A scaffold5859 Both SNP 0035.scaffold00136 612337 1 T C scaffold5859 ScafM INDEL 0035.scaffold00136 612527 1 A . scaffold5859 Both SNP 0035.scaffold00136 612536 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 612548 1 G T scaffold5859 ScafM SNP 0035.scaffold00136 612556 1 G T scaffold5859 ScafM SNP 0035.scaffold00136 612558 1 T G scaffold5859 ScafM INDEL 0035.scaffold00136 612592 1 . A scaffold5859 ScafM SNP 0035.scaffold00136 612618 1 T G scaffold5859 ScafM SNP 0035.scaffold00136 612625 1 G C scaffold5859 Both SNP 0035.scaffold00136 612636 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 612638 1 G C scaffold5859 ScafM SNP 0035.scaffold00136 612811 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 612823 2 CT TA scaffold5859 ScafM SNP 0035.scaffold00136 612841 1 T C scaffold5859 ScafM INDEL 0035.scaffold00136 612850 3 ACA ... scaffold5859 ScafM SNP 0035.scaffold00136 612867 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 612891 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 612922 1 A T scaffold5859 Both SNP 0035.scaffold00136 612936 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 612968 1 C G scaffold5859 ScafM SNP 0035.scaffold00136 612987 2 GT CC scaffold5859 ScafM SNP 0035.scaffold00136 612996 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 613019 2 TG CA scaffold5859 ScafM INDEL 0035.scaffold00136 613054 2 .. TA scaffold5859 ScafM SNP 0035.scaffold00136 613070 2 CA TG scaffold5859 ScafM SNP 0035.scaffold00136 613083 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 613089 2 GA AG scaffold5859 ScafM SNP 0035.scaffold00136 613116 1 G C scaffold5859 ScafM INDEL 0035.scaffold00136 613130 2 GT .. scaffold5859 ScafM SNP 0035.scaffold00136 613137 1 T A scaffold5859 ScafM INDEL 0035.scaffold00136 613140 5 ..... TAAAA scaffold5859 ScafM INDEL 0035.scaffold00136 613147 38 ...................................... TAAAAATTATTTTTTATTTATTCAAGTGATGAACGGGA scaffold5859 ScafM INDEL 0035.scaffold00136 613152 1 . G scaffold5859 ScafM INDEL 0035.scaffold00136 613178 2 GA .. scaffold5859 ScafM SNP 0035.scaffold00136 613182 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 613211 1 T C scaffold5859 ScafM INDEL 0035.scaffold00136 613217 3 TTA ... scaffold5859 ScafM INDEL 0035.scaffold00136 613245 8 ........ TGCCAGGT scaffold5859 ScafM SNP 0035.scaffold00136 613247 1 C A scaffold5859 ScafM SNP 0035.scaffold00136 613262 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 613268 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 613363 1 A T scaffold5859 ScafM SNP 0035.scaffold00136 613419 1 C G scaffold5859 ScafM SNP 0035.scaffold00136 613509 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 613537 1 G T scaffold5859 ScafM SNP 0035.scaffold00136 613617 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 613633 1 C A scaffold5859 ScafM SNP 0035.scaffold00136 613649 1 G C scaffold5859 ScafM SNP 0035.scaffold00136 613681 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 613686 2 GC AT scaffold5859 ScafM INDEL 0035.scaffold00136 613688 1 . A scaffold5859 ScafM SNP 0035.scaffold00136 613751 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 614115 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 614119 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 614124 1 C A scaffold5859 ScafM SNP 0035.scaffold00136 614131 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 614147 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 614168 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 614238 1 A C scaffold5859 ScafM SNP 0035.scaffold00136 614266 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 614270 1 G C scaffold5859 ScafM INDEL 0035.scaffold00136 614293 1 . A scaffold5859 ScafM SNP 0035.scaffold00136 614302 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 614314 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 614345 1 G T scaffold5859 ScafM SNP 0035.scaffold00136 614373 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 614389 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 614426 3 ATT GAA scaffold5859 ScafM INDEL 0035.scaffold00136 614432 3 TCT ..A scaffold5859 ScafM SNP 0035.scaffold00136 614436 1 T A scaffold5859 ScafM INDEL 0035.scaffold00136 614442 1 T . scaffold5859 ScafM INDEL 0035.scaffold00136 614444 1 . G scaffold5859 ScafM SNP 0035.scaffold00136 614621 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 614647 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 614662 1 C T scaffold5859 Both SNP 0035.scaffold00136 614733 1 A G scaffold5859 Both SNP 0035.scaffold00136 614762 1 C G scaffold5859 ScafM SNP 0035.scaffold00136 614839 1 A C scaffold5859 ScafM SNP 0035.scaffold00136 614857 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 614873 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 614895 1 C G scaffold5859 ScafM SNP 0035.scaffold00136 614898 1 A T scaffold5859 ReadM SNP 0035.scaffold00136 615083 1 A C - ReadM SNP 0035.scaffold00136 615897 1 G A - ReadM SNP 0035.scaffold00136 615924 1 T G - ReadM SNP 0035.scaffold00136 615933 1 A C - ReadM SNP 0035.scaffold00136 616016 1 T A - ReadM SNP 0035.scaffold00136 616093 1 T C - ScafM SNP 0035.scaffold00136 616182 1 T C scaffold5859 ScafM INDEL 0035.scaffold00136 616247 7 ....... ACTTTAG scaffold5859 Both SNP 0035.scaffold00136 616274 1 A C scaffold5859 Both SNP 0035.scaffold00136 616281 1 T A scaffold5859 ScafM INDEL 0035.scaffold00136 616405 3 TTG ... scaffold5859 ScafM INDEL 0035.scaffold00136 616411 4 AGAG .... scaffold5859 ScafM SNP 0035.scaffold00136 616499 1 G A scaffold5859 ScafM SNP 0035.scaffold00136 616513 1 A G scaffold5859 ScafM SNP 0035.scaffold00136 616625 1 A T scaffold5859 ScafM SNP 0035.scaffold00136 616639 1 A C scaffold5859 ScafM SNP 0035.scaffold00136 616687 1 G A scaffold5859 ScafM INDEL 0035.scaffold00136 616711 7 AATGCTG ....... scaffold5859 Both SNP 0035.scaffold00136 616801 1 A C scaffold5859 Both SNP 0035.scaffold00136 616809 1 G A scaffold5859 Both SNP 0035.scaffold00136 616850 1 T A scaffold5859 ScafM SNP 0035.scaffold00136 616869 1 T C scaffold5859 ScafM SNP 0035.scaffold00136 616871 1 G C scaffold5859 ScafM SNP 0035.scaffold00136 616879 1 C T scaffold5859 ScafM SNP 0035.scaffold00136 616898 1 T A scaffold5859 Both SNP 0035.scaffold00136 617084 1 T C scaffold5859 ReadM INDEL 0035.scaffold00136 617471 1 . C - ReadM SNP 0035.scaffold00136 618217 1 C T - ReadM INDEL 0035.scaffold00136 618387 1 . G - ReadM SNP 0035.scaffold00136 618415 1 G A - ReadM SNP 0035.scaffold00136 618633 1 T C - ReadM SNP 0035.scaffold00136 618673 1 G A - ReadM SNP 0035.scaffold00136 618710 1 A G - ReadM SNP 0035.scaffold00136 618849 1 G C - ReadM SNP 0035.scaffold00136 618900 1 A G - ReadM SNP 0035.scaffold00136 619080 2 TG CA - ReadM SNP 0035.scaffold00136 622787 1 A T - ReadM SNP 0035.scaffold00136 622904 1 A T - ReadM SNP 0035.scaffold00136 623126 1 G A - ReadM SNP 0035.scaffold00136 623481 1 A T - ReadM SNP 0035.scaffold00136 623528 1 A G - ReadM SNP 0035.scaffold00136 623535 1 C T - ReadM SNP 0035.scaffold00136 623634 1 G A - ReadM SNP 0035.scaffold00136 623718 1 A G - ReadM SNP 0035.scaffold00136 623815 1 G A - ReadM SNP 0035.scaffold00136 623868 1 T C - ReadM SNP 0035.scaffold00136 624013 1 A G - ReadM SNP 0035.scaffold00136 660015 1 A G - ReadM SNP 0035.scaffold00136 660032 1 A G - ReadM SNP 0035.scaffold00136 660223 1 T C - ReadM SNP 0035.scaffold00136 660337 1 C T - ReadM INDEL 0035.scaffold00136 661945 1 G . - ReadM SNP 0035.scaffold00136 662200 1 A G - ReadM SNP 0035.scaffold00136 662344 1 C T - ReadM SNP 0035.scaffold00136 662438 1 A T - ReadM INDEL 0035.scaffold00136 663183 2 AT .. - ReadM INDEL 0035.scaffold00136 663184 2 TC .. - ReadM SNP 0035.scaffold00136 663278 1 C T - ReadM SNP 0035.scaffold00136 663391 1 T C - ReadM SNP 0035.scaffold00136 663585 1 G A - ReadM SNP 0035.scaffold00136 663719 1 A G - ReadM INDEL 0035.scaffold00136 664182 1 T . - Both SNP 0035.scaffold00136 664206 1 T G scaffold849 ScafM SNP 0035.scaffold00136 664449 1 G A scaffold849 Both SNP 0035.scaffold00136 664483 1 A G scaffold849 ReadM SNP 0035.scaffold00136 664743 1 C T - ReadM SNP 0035.scaffold00136 664835 1 A G - ReadM SNP 0035.scaffold00136 664901 1 A T - ReadM SNP 0035.scaffold00136 665057 1 C T - ReadM INDEL 0035.scaffold00136 665123 1 T . - ReadM SNP 0035.scaffold00136 665379 1 C T - ReadM SNP 0035.scaffold00136 665490 1 C A - ReadM SNP 0035.scaffold00136 666068 1 G A - ReadM SNP 0035.scaffold00136 666097 1 G A - ReadM SNP 0035.scaffold00136 666106 1 T G - ReadM SNP 0035.scaffold00136 666256 1 T C - ReadM SNP 0035.scaffold00136 666314 1 A T - ReadM SNP 0035.scaffold00136 666382 1 T C - ReadM SNP 0035.scaffold00136 666440 1 A T - ReadM SNP 0035.scaffold00136 666453 1 T C - ReadM SNP 0035.scaffold00136 666536 1 T A - ReadM SNP 0035.scaffold00136 666754 1 T A - ReadM SNP 0035.scaffold00136 666954 1 C T - ReadM SNP 0035.scaffold00136 666994 1 T C - ReadM SNP 0035.scaffold00136 667050 1 G A - ReadM SNP 0035.scaffold00136 667067 1 G A - ReadM SNP 0035.scaffold00136 667394 1 C T - ReadM SNP 0035.scaffold00136 667406 1 T A - ReadM SNP 0035.scaffold00136 667449 1 T C - ReadM SNP 0035.scaffold00136 667940 1 G A - ReadM SNP 0035.scaffold00136 667972 1 G T - ReadM SNP 0035.scaffold00136 668218 1 T C - ReadM SNP 0035.scaffold00136 668329 1 A C - ReadM SNP 0035.scaffold00136 668346 1 A G - ReadM SNP 0035.scaffold00136 668490 1 A G - ReadM SNP 0035.scaffold00136 668638 1 G A - ReadM SNP 0035.scaffold00136 668932 1 G A - ReadM SNP 0035.scaffold00136 668967 1 G A - ReadM SNP 0035.scaffold00136 669142 1 T C - ReadM SNP 0035.scaffold00136 669157 1 T C - ReadM SNP 0035.scaffold00136 669390 1 A T - ReadM SNP 0035.scaffold00136 669439 1 G A - ReadM SNP 0035.scaffold00136 669723 1 C A - ReadM SNP 0035.scaffold00136 669813 1 C A - ReadM SNP 0035.scaffold00136 669850 1 T A - ReadM SNP 0035.scaffold00136 670169 1 T A - ReadM SNP 0035.scaffold00136 670174 1 G C - Both SNP 0035.scaffold00136 670257 1 G A scaffold849 ReadM SNP 0035.scaffold00136 670316 1 G A - ReadM SNP 0035.scaffold00136 670459 1 G A - ReadM SNP 0035.scaffold00136 670556 1 G A - ReadM SNP 0035.scaffold00136 670561 1 A T - ReadM SNP 0035.scaffold00136 670662 1 T G - ReadM SNP 0035.scaffold00136 670915 1 C G - ReadM SNP 0035.scaffold00136 671006 1 C A - ReadM SNP 0035.scaffold00136 671123 1 G C - ReadM SNP 0035.scaffold00136 671607 1 G A - Both SNP 0035.scaffold00136 671685 1 C G scaffold849 Both SNP 0035.scaffold00136 671895 1 G T scaffold849 ScafM SNP 0035.scaffold00136 672005 1 G A scaffold849 ScafM SNP 0035.scaffold00136 672030 1 T A scaffold849 ReadM SNP 0035.scaffold00136 672125 1 G C - ReadM INDEL 0035.scaffold00136 672180 2 AG .. - ReadM SNP 0035.scaffold00136 672694 1 T A - ReadM SNP 0035.scaffold00136 672734 1 C G - ReadM SNP 0035.scaffold00136 672852 1 A G - ReadM SNP 0035.scaffold00136 673058 1 C T - ReadM SNP 0035.scaffold00136 673094 1 G A - ReadM SNP 0035.scaffold00136 674263 1 C T - ReadM SNP 0035.scaffold00136 674386 1 T C - ReadM SNP 0035.scaffold00136 674422 1 C A - ReadM SNP 0035.scaffold00136 674613 1 G A - ReadM SNP 0035.scaffold00136 674706 1 G A - ReadM SNP 0035.scaffold00136 674719 1 G A - ReadM SNP 0035.scaffold00136 674740 1 T C - ReadM SNP 0035.scaffold00136 674851 1 T C - ReadM SNP 0035.scaffold00136 675058 1 T G - ReadM SNP 0035.scaffold00136 675305 1 C T - ReadM SNP 0035.scaffold00136 675810 1 A G - ReadM SNP 0035.scaffold00136 675822 1 C T - ReadM SNP 0035.scaffold00136 676023 1 G A - ReadM SNP 0035.scaffold00136 676194 1 G A - ReadM SNP 0035.scaffold00136 676242 1 T A - ReadM SNP 0035.scaffold00136 676332 1 T C - ReadM SNP 0035.scaffold00136 676346 1 G A - ReadM SNP 0035.scaffold00136 676607 1 T G - ReadM SNP 0035.scaffold00136 676815 1 T C - ReadM SNP 0035.scaffold00136 676921 1 T C - ReadM INDEL 0035.scaffold00136 677362 1 . T - ReadM SNP 0035.scaffold00136 677467 1 C G - ReadM SNP 0035.scaffold00136 677582 1 T C - ReadM SNP 0035.scaffold00136 677718 1 G A - ReadM SNP 0035.scaffold00136 677814 1 G A - ReadM INDEL 0035.scaffold00136 678153 1 . G - ReadM SNP 0035.scaffold00136 678192 1 A G - ReadM SNP 0035.scaffold00136 678319 1 G T - ReadM SNP 0035.scaffold00136 678378 1 G T - ReadM SNP 0035.scaffold00136 678430 1 T C - ReadM SNP 0035.scaffold00136 678860 1 A T - ReadM SNP 0035.scaffold00136 678875 1 A G - ReadM SNP 0035.scaffold00136 679462 1 G T - ReadM SNP 0035.scaffold00136 679469 1 C A - ReadM SNP 0035.scaffold00136 679752 1 G A - ReadM SNP 0035.scaffold00136 679826 1 T C - ReadM SNP 0035.scaffold00136 679842 1 T C - ReadM SNP 0035.scaffold00136 680171 1 C T - ReadM SNP 0035.scaffold00136 680319 1 C T - ReadM SNP 0035.scaffold00136 680361 1 T C - ReadM SNP 0035.scaffold00136 680472 1 T C - ReadM SNP 0035.scaffold00136 680576 1 T C - ReadM SNP 0035.scaffold00136 680935 2 TT AC - ReadM SNP 0035.scaffold00136 681079 2 CC TT - ReadM SNP 0035.scaffold00136 681135 1 G A - ReadM INDEL 0035.scaffold00136 681198 1 . C - ReadM SNP 0035.scaffold00136 681270 1 T G - ReadM SNP 0035.scaffold00136 681289 1 A G - Both SNP 0035.scaffold00136 681513 1 T C scaffold849 Both SNP 0035.scaffold00136 681519 1 T C scaffold849 ReadM SNP 0035.scaffold00136 683331 1 A T - ReadM SNP 0035.scaffold00136 683519 1 G A - ReadM SNP 0035.scaffold00136 683873 1 A G - ReadM SNP 0035.scaffold00136 684089 1 A G - ReadM SNP 0035.scaffold00136 684205 1 A G - ReadM SNP 0035.scaffold00136 684266 1 C T - ReadM SNP 0035.scaffold00136 684828 1 T C - ReadM SNP 0035.scaffold00136 684858 1 T C - ReadM SNP 0035.scaffold00136 685152 1 T C - ReadM SNP 0035.scaffold00136 685632 1 C G - ReadM SNP 0035.scaffold00136 686233 1 T C - ReadM SNP 0035.scaffold00136 687425 1 A G - ReadM SNP 0035.scaffold00136 687434 1 G T - ReadM SNP 0035.scaffold00136 687884 1 T A - ReadM SNP 0035.scaffold00136 688002 1 C A - ReadM SNP 0035.scaffold00136 688113 1 T A - ReadM SNP 0035.scaffold00136 688490 1 C A - ReadM SNP 0035.scaffold00136 688646 1 T C - ReadM SNP 0035.scaffold00136 688904 1 T C - ReadM INDEL 0035.scaffold00136 689281 1 . G - ReadM SNP 0035.scaffold00136 689308 1 T G - ReadM SNP 0035.scaffold00136 689328 1 G A - ReadM SNP 0035.scaffold00136 689471 1 T C - ReadM SNP 0035.scaffold00136 689756 1 T C - ReadM SNP 0035.scaffold00136 689814 1 T C - ReadM SNP 0035.scaffold00136 689884 1 G T - ReadM SNP 0035.scaffold00136 689922 1 T C - ReadM SNP 0035.scaffold00136 690002 1 A G - ReadM SNP 0035.scaffold00136 690063 1 G A - ReadM SNP 0035.scaffold00136 690235 1 A G - ReadM SNP 0035.scaffold00136 692206 1 T A - ReadM SNP 0035.scaffold00136 692508 1 T C - ReadM SNP 0035.scaffold00136 692688 1 C T - ReadM SNP 0035.scaffold00136 692697 1 C G - Both SNP 0035.scaffold00136 692750 1 C T scaffold849 Both SNP 0035.scaffold00136 692850 1 G T scaffold849 Both SNP 0035.scaffold00136 692986 1 A C scaffold849 Both INDEL 0035.scaffold00136 693075 1 A . scaffold849 Both SNP 0035.scaffold00136 693152 1 T C scaffold849 Both INDEL 0035.scaffold00136 693241 1 . C scaffold849 Both SNP 0035.scaffold00136 693298 1 G A scaffold849 ReadM SNP 0035.scaffold00136 694020 1 G A - ReadM INDEL 0035.scaffold00136 694143 1 G . - ReadM INDEL 0035.scaffold00136 694145 1 C . - ScafM INDEL 0035.scaffold00136 694145 2 CA .G scaffold849 ReadM SNP 0035.scaffold00136 694399 1 G A - ReadM SNP 0035.scaffold00136 694489 1 T C - ReadM SNP 0035.scaffold00136 694491 1 A G - ReadM SNP 0035.scaffold00136 694607 1 A C - ReadM SNP 0035.scaffold00136 695806 1 T C - ReadM SNP 0035.scaffold00136 695863 1 A C - ReadM SNP 0035.scaffold00136 695904 1 A C - ReadM SNP 0035.scaffold00136 696200 1 C G - ReadM SNP 0035.scaffold00136 696356 1 T C - ReadM SNP 0035.scaffold00136 696416 1 A G - ReadM SNP 0035.scaffold00136 696450 1 G A - ReadM SNP 0035.scaffold00136 696466 1 T C - ReadM SNP 0035.scaffold00136 696886 1 C T - ReadM SNP 0035.scaffold00136 696910 1 C T - ReadM SNP 0035.scaffold00136 697004 1 T C - ReadM SNP 0035.scaffold00136 697052 1 T A - ReadM SNP 0035.scaffold00136 697135 1 A C - ReadM SNP 0035.scaffold00136 697214 1 T C - ReadM SNP 0035.scaffold00136 697516 1 A G - ReadM SNP 0035.scaffold00136 697830 1 T C - ReadM SNP 0035.scaffold00136 697879 1 A T - ReadM SNP 0035.scaffold00136 697917 1 A G - ReadM SNP 0035.scaffold00136 698031 1 T C - ReadM SNP 0035.scaffold00136 698089 1 A T - ReadM SNP 0035.scaffold00136 698122 1 T A - ReadM SNP 0035.scaffold00136 698137 1 C T - ReadM SNP 0035.scaffold00136 698556 1 C T - ReadM SNP 0035.scaffold00136 698686 1 A G - ReadM SNP 0035.scaffold00136 698826 1 T C - ReadM SNP 0035.scaffold00136 698922 1 C A - ReadM SNP 0035.scaffold00136 699122 1 A T - ReadM SNP 0035.scaffold00136 699383 1 G A - Both SNP 0035.scaffold00136 699487 1 G T scaffold849 Both SNP 0035.scaffold00136 699496 1 T G scaffold849 Both SNP 0035.scaffold00136 699541 1 A G scaffold849 ReadM SNP 0035.scaffold00136 699794 1 G A - Both SNP 0035.scaffold00136 699935 1 G A scaffold849 Both SNP 0035.scaffold00136 699953 1 G A scaffold849 Both SNP 0035.scaffold00136 699961 1 T A scaffold849 ReadM SNP 0035.scaffold00136 700052 1 A G - Both INDEL 0035.scaffold00136 700216 1 . T scaffold849 ReadM SNP 0035.scaffold00136 700635 1 G A - ReadM SNP 0035.scaffold00136 701020 1 C T - Both SNP 0035.scaffold00136 701223 1 G A scaffold849 Both SNP 0035.scaffold00136 701545 1 T C scaffold849 ScafM INDEL 0035.scaffold00136 701701 3 TCT ... scaffold849 ScafM INDEL 0035.scaffold00136 701766 7 TCCTTTT ....... scaffold849 Both SNP 0035.scaffold00136 701898 1 C T scaffold849 Both SNP 0035.scaffold00136 702037 1 G A scaffold849 Both SNP 0035.scaffold00136 702090 1 T C scaffold849 Both SNP 0035.scaffold00136 702125 1 A G scaffold849 ScafM INDEL 0035.scaffold00136 702224 4 .... TATT scaffold849 Both SNP 0035.scaffold00136 702306 1 C T scaffold849 Both SNP 0035.scaffold00136 702588 1 A T scaffold849 Both INDEL 0035.scaffold00136 702645 1 . A scaffold849 ScafM SNP 0035.scaffold00136 702651 1 G T scaffold849 ScafM SNP 0035.scaffold00136 702701 2 AG TT scaffold849 Both SNP 0035.scaffold00136 702913 1 T C scaffold849 Both SNP 0035.scaffold00136 703037 1 G T scaffold849 ReadM SNP 0035.scaffold00136 703099 1 A G - ReadM SNP 0035.scaffold00136 703367 1 G T - ReadM INDEL 0035.scaffold00136 703596 2 .. TA - Both SNP 0035.scaffold00136 703815 1 G A scaffold849 Both SNP 0035.scaffold00136 703933 1 T C scaffold849 Both SNP 0035.scaffold00136 703971 1 T C scaffold849 ScafM SNP 0035.scaffold00136 704118 1 C T scaffold849 ReadM SNP 0035.scaffold00136 704370 1 G A - ReadM SNP 0035.scaffold00136 704547 1 G C - ReadM SNP 0035.scaffold00136 704563 1 G A - ReadM SNP 0035.scaffold00136 704894 1 A G - ReadM SNP 0035.scaffold00136 704931 1 A G - Both SNP 0035.scaffold00136 705070 1 C A scaffold849 ScafM INDEL 0035.scaffold00136 706621 14 GTCATTTTGAACAA .............. scaffold849 ScafM SNP 0035.scaffold00136 706645 1 T G scaffold849 Both SNP 0035.scaffold00136 706697 1 C T scaffold849 ScafM SNP 0035.scaffold00136 706777 1 T C scaffold849 Both INDEL 0035.scaffold00136 707100 3 ... AAT scaffold849 ScafM SNP 0035.scaffold00136 707328 1 C T scaffold849 Both SNP 0035.scaffold00136 707456 1 G A scaffold849 Both SNP 0035.scaffold00136 707500 1 C T scaffold849 Both SNP 0035.scaffold00136 707714 1 A C scaffold849 Both SNP 0035.scaffold00136 707920 1 T C scaffold849 Both SNP 0035.scaffold00136 707989 1 G T scaffold849 Both SNP 0035.scaffold00136 708122 1 A G scaffold849 ReadM SNP 0035.scaffold00136 708246 1 T C - Both INDEL 0035.scaffold00136 708746 1 A . scaffold849 ScafM INDEL 0035.scaffold00136 708959 22 ...................... CAACTTTGTTTTGGCGAATTTT scaffold849 ScafM SNP 0035.scaffold00136 708964 1 G C scaffold849 Both SNP 0035.scaffold00136 708993 1 G T scaffold849 ScafM SNP 0035.scaffold00136 709215 1 G A scaffold849 Both SNP 0035.scaffold00136 709298 1 T G scaffold849 ScafM SNP 0035.scaffold00136 709351 1 G T scaffold849 Both SNP 0035.scaffold00136 709642 1 C T scaffold849 Both SNP 0035.scaffold00136 710022 1 A G scaffold849 Both SNP 0035.scaffold00136 710042 1 T C scaffold849 ScafM SNP 0035.scaffold00136 710297 1 C T scaffold849 ScafM SNP 0035.scaffold00136 710464 1 C A scaffold849 Both SNP 0035.scaffold00136 710605 1 C T scaffold849 Both SNP 0035.scaffold00136 710648 1 C G scaffold849 ScafM SNP 0035.scaffold00136 710710 1 T C scaffold849 ScafM SNP 0035.scaffold00136 710724 1 T A scaffold849 ScafM SNP 0035.scaffold00136 710759 1 G T scaffold849 Both SNP 0035.scaffold00136 710824 1 A G scaffold849 Both SNP 0035.scaffold00136 710966 1 T C scaffold849 Both SNP 0035.scaffold00136 711014 1 C T scaffold849 Both SNP 0035.scaffold00136 711148 1 A T scaffold849 ReadM SNP 0035.scaffold00136 712375 1 G A - ReadM SNP 0035.scaffold00136 712908 1 A T - ScafM SNP 0035.scaffold00136 713089 1 G A scaffold849 Both SNP 0035.scaffold00136 713158 1 A G scaffold849 Both SNP 0035.scaffold00136 713230 1 A G scaffold849 ScafM SNP 0035.scaffold00136 713347 1 A G scaffold849 Both SNP 0035.scaffold00136 713367 1 T C scaffold849 Both SNP 0035.scaffold00136 713451 1 T C scaffold849 Both SNP 0035.scaffold00136 713811 1 C T scaffold849 Both SNP 0035.scaffold00136 713864 1 A C scaffold849 Both SNP 0035.scaffold00136 713914 1 C T scaffold849 Both SNP 0035.scaffold00136 713960 1 T C scaffold849 Both SNP 0035.scaffold00136 714140 1 G T scaffold849 ReadM SNP 0035.scaffold00136 714439 1 A C - ReadM SNP 0035.scaffold00136 714515 1 T A - ReadM INDEL 0035.scaffold00136 715578 1 A . - ReadM SNP 0035.scaffold00136 715691 1 C T - ReadM SNP 0035.scaffold00136 716215 1 A G - Both SNP 0035.scaffold00136 716549 1 T A scaffold849 Both SNP 0035.scaffold00136 716710 1 A G scaffold849 ScafM SNP 0035.scaffold00136 716764 1 G T scaffold849 Both SNP 0035.scaffold00136 716812 1 T C scaffold849 Both SNP 0035.scaffold00136 716828 1 T C scaffold849 ScafM SNP 0035.scaffold00136 716883 1 G T scaffold849 ScafM INDEL 0035.scaffold00136 716886 1 . A scaffold849 Both SNP 0035.scaffold00136 716927 1 T C scaffold849 Both SNP 0035.scaffold00136 717077 1 C T scaffold849 Both SNP 0035.scaffold00136 717513 1 A G scaffold849 ScafM SNP 0035.scaffold00136 717762 1 G A scaffold849 ScafM SNP 0035.scaffold00136 717954 1 C T scaffold849 Both SNP 0035.scaffold00136 718049 1 T C scaffold849 ScafM INDEL 0035.scaffold00136 718169 1 T . scaffold849 ScafM SNP 0035.scaffold00136 718474 1 A G scaffold849 ScafM SNP 0035.scaffold00136 718744 1 T C scaffold849 Both SNP 0035.scaffold00136 718864 1 C T scaffold849 Both SNP 0035.scaffold00136 718885 1 C T scaffold849 ReadM SNP 0035.scaffold00136 718979 1 A G - ReadM INDEL 0035.scaffold00136 719121 3 GAC ... - Both SNP 0035.scaffold00136 719464 1 T G scaffold849 Both SNP 0035.scaffold00136 719530 1 T A scaffold849 Both SNP 0035.scaffold00136 719697 1 T A scaffold849 Both SNP 0035.scaffold00136 719750 1 T C scaffold849 Both SNP 0035.scaffold00136 720070 1 A G scaffold849 Both SNP 0035.scaffold00136 720238 1 T A scaffold849 Both SNP 0035.scaffold00136 720258 1 A T scaffold849 Both SNP 0035.scaffold00136 720333 1 C A scaffold849 Both SNP 0035.scaffold00136 720359 1 C A scaffold849 Both SNP 0035.scaffold00136 720450 1 A C scaffold849 Both SNP 0035.scaffold00136 720842 1 G C scaffold849 Both INDEL 0035.scaffold00136 720908 1 . T scaffold849 Both SNP 0035.scaffold00136 721018 1 T C scaffold849 Both SNP 0035.scaffold00136 721106 1 G C scaffold849 ScafM SNP 0035.scaffold00136 721114 2 TG CT scaffold849 Both SNP 0035.scaffold00136 721465 1 C T scaffold849 Both SNP 0035.scaffold00136 721597 1 C A scaffold849 ReadM SNP 0035.scaffold00136 722115 1 C T - ReadM INDEL 0035.scaffold00136 722222 1 . T - ReadM SNP 0035.scaffold00136 722353 1 T C - ScafM INDEL 0035.scaffold00136 722527 7 CGAACAT ....... scaffold849 ScafM INDEL 0035.scaffold00136 722608 14 TCCTATTTTCTATT .............. scaffold849 Both INDEL 0035.scaffold00136 722854 1 A . scaffold849 Both SNP 0035.scaffold00136 723659 1 C T scaffold849 ScafM SNP 0035.scaffold00136 724420 1 C T scaffold849 ReadM SNP 0035.scaffold00136 724477 1 C T - Both SNP 0035.scaffold00136 725282 1 C G scaffold32797 ScafM INDEL 0035.scaffold00136 725403 1 . T scaffold32797 ScafM INDEL 0035.scaffold00136 725472 1 . T scaffold32797 ScafM SNP 0035.scaffold00136 725474 1 T A scaffold32797 ScafM INDEL 0035.scaffold00136 725479 3 ... AAA scaffold32797 Both SNP 0035.scaffold00136 725495 1 C A scaffold32797 ReadM SNP 0035.scaffold00136 725498 1 A G - Both SNP 0035.scaffold00136 725567 1 T C scaffold32797 Both SNP 0035.scaffold00136 725781 1 A C scaffold32797 Both SNP 0035.scaffold00136 725864 1 A G scaffold32797 ScafM SNP 0035.scaffold00136 725945 2 GA AT scaffold32797 ReadM SNP 0035.scaffold00136 726072 1 A G - Both SNP 0035.scaffold00136 726878 1 T G scaffold849 Both SNP 0035.scaffold00136 727000 1 G A scaffold849 Both SNP 0035.scaffold00136 727185 1 C A scaffold849 Both INDEL 0035.scaffold00136 727265 2 .. TT scaffold849 Both SNP 0035.scaffold00136 727476 1 T G scaffold849 ScafM SNP 0035.scaffold00136 727499 1 G A scaffold849 ScafM INDEL 0035.scaffold00136 727780 2 .. TT scaffold849 Both SNP 0035.scaffold00136 727784 1 C A scaffold849 Both SNP 0035.scaffold00136 727879 1 C T scaffold849 Both SNP 0035.scaffold00136 728091 1 A T scaffold849 ReadM SNP 0035.scaffold00136 728611 1 T G - Both SNP 0035.scaffold00136 728770 1 T C scaffold849 ScafM SNP 0035.scaffold00136 729081 1 T G scaffold849 ScafM SNP 0035.scaffold00136 729104 1 A C scaffold849 ReadM SNP 0035.scaffold00136 729386 1 T C - Both SNP 0035.scaffold00136 729617 1 A C scaffold849 Both INDEL 0035.scaffold00136 729755 1 . G scaffold849 ScafM SNP 0035.scaffold00136 729808 1 G T scaffold849 ScafM INDEL 0035.scaffold00136 729890 1 C . scaffold849 Both SNP 0035.scaffold00136 729978 1 T C scaffold849 Both SNP 0035.scaffold00136 730067 1 T C scaffold849 ScafM SNP 0035.scaffold00136 730200 1 T C scaffold849 ScafM SNP 0035.scaffold00136 730361 1 C T scaffold849 Both SNP 0035.scaffold00136 730397 1 C T scaffold849 Both INDEL 0035.scaffold00136 730425 1 T . scaffold849 Both SNP 0035.scaffold00136 730442 1 T C scaffold849 ReadM SNP 0035.scaffold00136 731148 1 C T - ReadM SNP 0035.scaffold00136 731223 1 G A - ReadM SNP 0035.scaffold00136 731913 1 G T - ReadM SNP 0035.scaffold00136 731956 1 C G - ReadM SNP 0035.scaffold00136 732112 1 T G - Both SNP 0035.scaffold00136 732356 1 G A scaffold849 Both SNP 0035.scaffold00136 733145 1 T G scaffold849 ScafM SNP 0035.scaffold00136 733392 1 T C scaffold849 ReadM SNP 0035.scaffold00136 733569 1 C G - ScafM SNP 0035.scaffold00136 734584 1 T C scaffold63010 ScafM SNP 0035.scaffold00136 734601 1 T G scaffold63010 ReadM SNP 0035.scaffold00136 734691 1 G A - ScafM INDEL 0035.scaffold00136 736505 1 . A scaffold28077 ScafM SNP 0035.scaffold00136 736512 1 A G scaffold28077 ScafM SNP 0035.scaffold00136 736517 1 G T scaffold28077 ScafM SNP 0035.scaffold00136 736535 1 T C scaffold28077 ScafM SNP 0035.scaffold00136 736545 1 A G scaffold28077 ScafM INDEL 0035.scaffold00136 736584 1 A . scaffold28077 ScafM SNP 0035.scaffold00136 736590 1 G A scaffold28077 ScafM SNP 0035.scaffold00136 736612 2 TT CA scaffold28077 ScafM SNP 0035.scaffold00136 736616 1 G A scaffold28077 ScafM SNP 0035.scaffold00136 736739 1 T C scaffold28077 ScafM INDEL 0035.scaffold00136 736744 1 A . scaffold28077 ScafM SNP 0035.scaffold00136 736764 1 A G scaffold28077 ScafM INDEL 0035.scaffold00136 736820 4 AGCT .... scaffold28077 ScafM SNP 0035.scaffold00136 736893 1 T C scaffold28077 ScafM SNP 0035.scaffold00136 736910 1 T C scaffold28077 ScafM SNP 0035.scaffold00136 736914 1 A G scaffold28077 ScafM INDEL 0035.scaffold00136 736932 3 .AT TGG scaffold28077 ScafM SNP 0035.scaffold00136 736942 1 A T scaffold28077 ReadM SNP 0035.scaffold00136 737789 1 T C - ReadM SNP 0035.scaffold00136 738062 1 A G - ReadM SNP 0035.scaffold00136 738180 1 A C - ReadM SNP 0035.scaffold00136 738191 1 A G - ReadM INDEL 0035.scaffold00136 738193 1 A . - ReadM SNP 0035.scaffold00136 738327 1 A C - ReadM SNP 0035.scaffold00136 738478 1 G A - ReadM SNP 0035.scaffold00136 738483 1 C A - ReadM SNP 0035.scaffold00136 738641 1 A C - ReadM SNP 0035.scaffold00136 738968 1 A T - ReadM SNP 0035.scaffold00136 739003 1 G T - ReadM SNP 0035.scaffold00136 739120 1 G A - ReadM SNP 0035.scaffold00136 739416 1 C T - ReadM SNP 0035.scaffold00136 739570 1 T C - ReadM SNP 0035.scaffold00136 739645 1 A C - ReadM SNP 0035.scaffold00136 739763 1 T C - ReadM SNP 0035.scaffold00136 739789 1 T C - ReadM SNP 0035.scaffold00136 739888 1 A G - ReadM SNP 0035.scaffold00136 740245 1 T C - ReadM SNP 0035.scaffold00136 740621 1 C T - ReadM INDEL 0035.scaffold00136 741034 1 A . - ReadM SNP 0035.scaffold00136 741073 1 G A - ReadM SNP 0035.scaffold00136 741095 1 C T - ReadM INDEL 0035.scaffold00136 741238 1 . C - Both SNP 0035.scaffold00136 741340 1 C T scaffold235 Both SNP 0035.scaffold00136 741384 1 T C scaffold235 Both SNP 0035.scaffold00136 741503 1 G A scaffold235 Both SNP 0035.scaffold00136 741842 1 G A scaffold235 Both SNP 0035.scaffold00136 741902 1 A G scaffold235 ReadM SNP 0035.scaffold00136 742134 1 C T - Both INDEL 0035.scaffold00136 742170 1 . A scaffold235 ScafM SNP 0035.scaffold00136 742174 1 C A scaffold235 Both INDEL 0035.scaffold00136 742270 1 . A scaffold235 ReadM SNP 0035.scaffold00136 742528 1 C A - ReadM SNP 0035.scaffold00136 742653 1 T C - ReadM SNP 0035.scaffold00136 743461 1 A T - ReadM SNP 0035.scaffold00136 743567 1 C T - Both SNP 0035.scaffold00136 744032 1 G A scaffold235 Both SNP 0035.scaffold00136 744054 1 C T scaffold235 Both SNP 0035.scaffold00136 744239 1 A G scaffold235 Both SNP 0035.scaffold00136 744249 1 C A scaffold235 ReadM INDEL 0035.scaffold00136 744414 1 . A - Both SNP 0035.scaffold00136 744823 1 A G scaffold235 Both SNP 0035.scaffold00136 744843 1 G C scaffold235 Both SNP 0035.scaffold00136 744879 1 A T scaffold235 ReadM SNP 0035.scaffold00136 745332 1 T C - ReadM SNP 0035.scaffold00136 745400 1 G C - ReadM SNP 0035.scaffold00136 745528 1 T C - ReadM SNP 0035.scaffold00136 745606 1 G A - ReadM SNP 0035.scaffold00136 745636 1 G A - ReadM SNP 0035.scaffold00136 745981 1 C G - Both SNP 0035.scaffold00136 746032 1 C T scaffold235 ReadM SNP 0035.scaffold00136 746310 1 T C - ReadM SNP 0035.scaffold00136 746398 1 A G - ReadM SNP 0035.scaffold00136 746937 1 A G - ReadM SNP 0035.scaffold00136 746961 1 A G - ReadM SNP 0035.scaffold00136 747030 1 A T - ReadM SNP 0035.scaffold00136 747081 1 A G - ReadM SNP 0035.scaffold00136 747216 1 C T - ReadM SNP 0035.scaffold00136 747379 1 C T - ScafM SNP 0035.scaffold00136 747532 1 A G scaffold235 ScafM SNP 0035.scaffold00136 747554 1 A C scaffold235 ScafM SNP 0035.scaffold00136 747945 1 A C scaffold52337 ScafM SNP 0035.scaffold00136 747952 1 G A scaffold52337 ScafM SNP 0035.scaffold00136 747963 1 T G scaffold52337 ScafM INDEL 0035.scaffold00136 748004 1 T . scaffold52337 ScafM SNP 0035.scaffold00136 748030 1 T C scaffold52337 ScafM INDEL 0035.scaffold00136 748092 3 CTT ... scaffold52337 ScafM SNP 0035.scaffold00136 748159 1 T C scaffold52337 ScafM SNP 0035.scaffold00136 748178 1 C T scaffold52337 ScafM SNP 0035.scaffold00136 748219 1 T G scaffold52337 ScafM SNP 0035.scaffold00136 748358 1 G T scaffold235 ScafM SNP 0035.scaffold00136 748702 1 T G scaffold235 Both SNP 0035.scaffold00136 748704 1 G C scaffold235 ScafM SNP 0035.scaffold00136 748730 1 C T scaffold235 Both SNP 0035.scaffold00136 748834 1 C G scaffold235 ScafM SNP 0035.scaffold00136 748865 1 T G scaffold235 ScafM SNP 0035.scaffold00136 748868 1 T C scaffold235 ScafM SNP 0035.scaffold00136 748965 1 A G scaffold235 ScafM SNP 0035.scaffold00136 749044 1 A T scaffold235 ScafM SNP 0035.scaffold00136 749200 1 A G scaffold235 ScafM SNP 0035.scaffold00136 749252 1 G A scaffold235 ScafM SNP 0035.scaffold00136 749343 1 C T scaffold235 ScafM INDEL 0035.scaffold00136 749446 16 AATGGAGGATAAGATT ................ scaffold235 ScafM INDEL 0035.scaffold00136 749490 1 . T scaffold235 ScafM SNP 0035.scaffold00136 749548 1 T C scaffold235 ScafM SNP 0035.scaffold00136 749620 1 A C scaffold235 ScafM INDEL 0035.scaffold00136 749757 1 T . scaffold235 ScafM SNP 0035.scaffold00136 749764 1 G T scaffold235 ScafM SNP 0035.scaffold00136 749983 2 GC AG scaffold235 ScafM SNP 0035.scaffold00136 750032 1 T C scaffold235 ScafM SNP 0035.scaffold00136 750050 1 T C scaffold235 ReadM SNP 0035.scaffold00136 751137 1 A G - ReadM SNP 0035.scaffold00136 751422 1 A T - ReadM SNP 0035.scaffold00136 751919 1 A C - ReadM SNP 0035.scaffold00136 751954 1 T A - Both SNP 0035.scaffold00136 752170 1 A G scaffold235 Both SNP 0035.scaffold00136 752194 1 G A scaffold235 Both SNP 0035.scaffold00136 752216 1 T C scaffold235 Both SNP 0035.scaffold00136 752403 1 T G scaffold235 Both INDEL 0035.scaffold00136 752602 1 A . scaffold235 Both SNP 0035.scaffold00136 752829 1 C G scaffold235 Both SNP 0035.scaffold00136 752920 1 C T scaffold235 ScafM SNP 0035.scaffold00136 752992 2 AC GA scaffold235 Both SNP 0035.scaffold00136 753159 1 G C scaffold235 Both INDEL 0035.scaffold00136 753557 3 TTT ... scaffold235 ScafM SNP 0035.scaffold00136 753634 1 A G scaffold235 ScafM SNP 0035.scaffold00136 753643 1 T A scaffold235 Both SNP 0035.scaffold00136 753656 1 A G scaffold235 Both SNP 0035.scaffold00136 753671 1 T C scaffold235 Both SNP 0035.scaffold00136 753832 1 A C scaffold235 Both SNP 0035.scaffold00136 753950 1 G C scaffold235 ScafM INDEL 0035.scaffold00136 754204 1 . T scaffold235 ScafM SNP 0035.scaffold00136 754314 1 A G scaffold235 ScafM SNP 0035.scaffold00136 754325 2 CT TG scaffold235 ScafM INDEL 0035.scaffold00136 754400 1 . A scaffold235 ScafM SNP 0035.scaffold00136 754597 1 A C scaffold235 ScafM SNP 0035.scaffold00136 754689 1 C T scaffold235 ReadM SNP 0035.scaffold00136 755135 1 C T - ReadM SNP 0035.scaffold00136 755179 1 T G - ReadM INDEL 0035.scaffold00136 755382 1 A . - ReadM SNP 0035.scaffold00136 755439 1 G A - ReadM SNP 0035.scaffold00136 755447 1 C T - ReadM SNP 0035.scaffold00136 755561 1 C T - ReadM SNP 0035.scaffold00136 755574 1 G A - ReadM SNP 0035.scaffold00136 755600 1 G A - ReadM SNP 0035.scaffold00136 755662 1 C A - ReadM SNP 0035.scaffold00136 755738 1 G A - ReadM SNP 0035.scaffold00136 755968 1 T C - ReadM SNP 0035.scaffold00136 755974 1 T C - ReadM SNP 0035.scaffold00136 756038 1 G C - ReadM SNP 0035.scaffold00136 756177 1 A T - ReadM INDEL 0035.scaffold00136 756229 1 . A - ReadM SNP 0035.scaffold00136 756245 1 T C - ReadM SNP 0035.scaffold00136 756542 1 C G - ReadM SNP 0035.scaffold00136 756625 1 T C - ReadM SNP 0035.scaffold00136 756667 1 G A - Both SNP 0035.scaffold00136 756794 1 A C scaffold235 ReadM SNP 0035.scaffold00136 757161 1 C A - ReadM SNP 0035.scaffold00136 757167 1 C T - ReadM SNP 0035.scaffold00136 757181 1 C T - ReadM SNP 0035.scaffold00136 757291 1 A T - ReadM SNP 0035.scaffold00136 757372 1 C T - ReadM SNP 0035.scaffold00136 757471 1 A C - ReadM SNP 0035.scaffold00136 757648 1 A G - ReadM SNP 0035.scaffold00136 758010 1 G A - ReadM SNP 0035.scaffold00136 758080 1 T C - ReadM SNP 0035.scaffold00136 758087 1 G A - ReadM SNP 0035.scaffold00136 758144 1 C A - ReadM INDEL 0035.scaffold00136 758259 2 TC .. - ReadM SNP 0035.scaffold00136 758363 1 A G - ReadM SNP 0035.scaffold00136 758422 1 T A - ReadM SNP 0035.scaffold00136 758576 1 G C - ReadM SNP 0035.scaffold00136 759036 1 G A - ReadM SNP 0035.scaffold00136 759202 1 A G - ReadM SNP 0035.scaffold00136 759307 1 C T - ReadM INDEL 0035.scaffold00136 759400 1 . A - ReadM SNP 0035.scaffold00136 759458 1 T A - ReadM INDEL 0035.scaffold00136 759554 1 A . - ReadM INDEL 0035.scaffold00136 759645 1 C . - ReadM SNP 0035.scaffold00136 759859 1 T C - ReadM SNP 0035.scaffold00136 760078 1 G C - ReadM SNP 0035.scaffold00136 760153 1 T C - ReadM SNP 0035.scaffold00136 760559 1 A C - ReadM SNP 0035.scaffold00136 760721 1 G A - ReadM SNP 0035.scaffold00136 760731 1 G T - ReadM SNP 0035.scaffold00136 760806 1 A T - ReadM SNP 0035.scaffold00136 760848 1 G A - ReadM SNP 0035.scaffold00136 761196 1 C T - ReadM SNP 0035.scaffold00136 761234 1 T C - ReadM SNP 0035.scaffold00136 761288 1 G A - ReadM SNP 0035.scaffold00136 761332 1 T G - Both SNP 0035.scaffold00136 761543 1 T C scaffold235 ScafM SNP 0035.scaffold00136 761683 1 T C scaffold235 ReadM SNP 0035.scaffold00136 761774 1 A G - ReadM SNP 0035.scaffold00136 761936 1 C T - ReadM SNP 0035.scaffold00136 762341 1 T C - Both SNP 0035.scaffold00136 762364 1 C T scaffold235 Both SNP 0035.scaffold00136 762394 1 A C scaffold235 ReadM SNP 0035.scaffold00136 762469 1 A C - ScafM SNP 0035.scaffold00136 762521 1 T A scaffold235 ScafM SNP 0035.scaffold00136 762523 1 G T scaffold235 Both SNP 0035.scaffold00136 762855 1 T C scaffold235 Both SNP 0035.scaffold00136 763079 1 C T scaffold235 Both SNP 0035.scaffold00136 763081 1 A G scaffold235 Both SNP 0035.scaffold00136 763128 1 T C scaffold235 ReadM SNP 0035.scaffold00136 763330 1 C T - ReadM SNP 0035.scaffold00136 763431 1 T C - ReadM SNP 0035.scaffold00136 763496 1 A C - ReadM SNP 0035.scaffold00136 766325 1 A G - ReadM INDEL 0035.scaffold00136 766504 1 A . - Both SNP 0035.scaffold00136 766655 1 T C scaffold235 Both SNP 0035.scaffold00136 766717 1 C G scaffold235 ReadM SNP 0035.scaffold00136 766729 1 C T - ReadM SNP 0035.scaffold00136 766920 1 C T - ReadM SNP 0035.scaffold00136 766999 1 G T - ReadM INDEL 0035.scaffold00136 767037 1 G . - ReadM SNP 0035.scaffold00136 767105 1 C A - ReadM SNP 0035.scaffold00136 767187 1 A G - ReadM SNP 0035.scaffold00136 772160 1 C T - ReadM SNP 0035.scaffold00136 779410 1 A G - ReadM SNP 0035.scaffold00136 779483 1 T C - ReadM INDEL 0035.scaffold00136 779522 1 . C - ReadM SNP 0035.scaffold00136 779582 1 A G - ReadM SNP 0035.scaffold00136 779663 1 G A - ReadM SNP 0035.scaffold00136 779819 1 G A - ReadM SNP 0035.scaffold00136 779858 1 A G - ReadM SNP 0035.scaffold00136 780616 1 C T - ReadM SNP 0035.scaffold00136 780681 1 T G - ReadM INDEL 0035.scaffold00136 780782 1 . A - ReadM SNP 0035.scaffold00136 780897 1 A G - ReadM SNP 0035.scaffold00136 781312 1 A G - ReadM SNP 0035.scaffold00136 781356 1 C T - ReadM SNP 0035.scaffold00136 781384 1 T C - ReadM SNP 0035.scaffold00136 781860 1 G A - ReadM SNP 0035.scaffold00136 781875 1 G C - ReadM SNP 0035.scaffold00136 781935 1 A G - ReadM SNP 0035.scaffold00136 782284 1 T C - ReadM SNP 0035.scaffold00136 782292 1 A G - ReadM INDEL 0035.scaffold00136 782385 1 . C - ReadM SNP 0035.scaffold00136 782538 1 C T - ReadM SNP 0035.scaffold00136 782551 1 T A - ReadM SNP 0035.scaffold00136 782647 1 A G - ReadM SNP 0035.scaffold00136 782649 1 A G - ReadM SNP 0035.scaffold00136 782786 1 T C - ReadM SNP 0035.scaffold00136 782935 1 A G - Both SNP 0035.scaffold00136 783346 1 G A scaffold3593 Both SNP 0035.scaffold00136 783452 1 C T scaffold3593 Both SNP 0035.scaffold00136 783478 1 C G scaffold3593 Both SNP 0035.scaffold00136 783726 1 A T scaffold3593 Both SNP 0035.scaffold00136 783747 1 A G scaffold3593 Both SNP 0035.scaffold00136 783754 1 G A scaffold3593 Both SNP 0035.scaffold00136 783857 1 A C scaffold3593 Both SNP 0035.scaffold00136 783860 1 T A scaffold3593 Both SNP 0035.scaffold00136 783883 1 T A scaffold3593 Both SNP 0035.scaffold00136 784007 1 T A scaffold3593 Both SNP 0035.scaffold00136 784061 1 T A scaffold3593 Both SNP 0035.scaffold00136 784262 1 G A scaffold3593 Both SNP 0035.scaffold00136 784377 1 A G scaffold3593 Both INDEL 0035.scaffold00136 784654 2 .. TA scaffold3593 Both INDEL 0035.scaffold00136 784728 1 C . scaffold3593 Both SNP 0035.scaffold00136 784750 1 C G scaffold3593 Both SNP 0035.scaffold00136 784786 1 C T scaffold3593 Both SNP 0035.scaffold00136 784881 1 T C scaffold3593 Both SNP 0035.scaffold00136 784920 1 A G scaffold3593 Both INDEL 0035.scaffold00136 784966 1 . A scaffold3593 ScafM SNP 0035.scaffold00136 784968 1 T G scaffold3593 ScafM SNP 0035.scaffold00136 785210 1 A G scaffold3593 ScafM SNP 0035.scaffold00136 785683 1 T C scaffold3593 ScafM SNP 0035.scaffold00136 785723 1 G T scaffold3593 ScafM SNP 0035.scaffold00136 785829 1 T C scaffold3593 Both SNP 0035.scaffold00136 786043 1 G A scaffold3593 Both SNP 0035.scaffold00136 786516 1 G A scaffold3593 Both SNP 0035.scaffold00136 786536 1 C T scaffold3593 Both SNP 0035.scaffold00136 786580 1 G C scaffold3593 Both SNP 0035.scaffold00136 786637 1 C A scaffold3593 Both SNP 0035.scaffold00136 786675 1 T C scaffold3593 Both SNP 0035.scaffold00136 786678 1 T A scaffold3593 ReadM SNP 0035.scaffold00136 786803 1 C T - Both SNP 0035.scaffold00136 786937 1 G A scaffold3593 ScafM INDEL 0035.scaffold00136 786995 1 A . scaffold3593 ScafM SNP 0035.scaffold00136 787003 1 T C scaffold3593 ScafM INDEL 0035.scaffold00136 787007 2 AT .. scaffold3593 ScafM SNP 0035.scaffold00136 787010 2 TT CC scaffold3593 Both SNP 0035.scaffold00136 787044 1 T G scaffold3593 Both SNP 0035.scaffold00136 787146 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 787422 1 A G - ReadM SNP 0035.scaffold00136 787693 1 C T - ReadM SNP 0035.scaffold00136 788079 1 G A - ReadM SNP 0035.scaffold00136 788373 1 G A - ReadM SNP 0035.scaffold00136 791342 1 A C - ReadM SNP 0035.scaffold00136 791367 1 T C - ReadM INDEL 0035.scaffold00136 793584 1 . T - ReadM SNP 0035.scaffold00136 794017 1 A G - ReadM SNP 0035.scaffold00136 794094 1 A G - ReadM SNP 0035.scaffold00136 794147 1 T C - ReadM SNP 0035.scaffold00136 794248 1 T C - ReadM SNP 0035.scaffold00136 794314 1 G T - ReadM SNP 0035.scaffold00136 794334 1 T A - ReadM SNP 0035.scaffold00136 794342 1 T C - ReadM SNP 0035.scaffold00136 794368 1 A G - ReadM SNP 0035.scaffold00136 794500 1 T A - ReadM SNP 0035.scaffold00136 794854 1 G T - ReadM SNP 0035.scaffold00136 794912 1 G T - ReadM SNP 0035.scaffold00136 795283 1 A C - ReadM SNP 0035.scaffold00136 795301 1 T G - ReadM SNP 0035.scaffold00136 795309 1 G A - ReadM SNP 0035.scaffold00136 795352 1 T A - ReadM SNP 0035.scaffold00136 798788 1 A T - ScafM SNP 0035.scaffold00136 800597 1 A G scaffold6711 ScafM SNP 0035.scaffold00136 800649 1 A C scaffold6711 ScafM SNP 0035.scaffold00136 800660 1 A T scaffold6711 ReadM SNP 0035.scaffold00136 801607 1 T A - ScafM SNP 0035.scaffold00136 805775 1 C T scaffold3593 ScafM SNP 0035.scaffold00136 805784 1 G C scaffold3593 ScafM SNP 0035.scaffold00136 805805 1 T A scaffold3593 ScafM SNP 0035.scaffold00136 805850 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 805865 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 805981 1 A C scaffold3593 ScafM SNP 0035.scaffold00136 807793 1 T C scaffold3593 ScafM SNP 0035.scaffold00136 807869 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 810444 1 A G - Both SNP 0035.scaffold00136 810762 1 C G scaffold3593 ReadM SNP 0035.scaffold00136 810857 1 T C - ReadM SNP 0035.scaffold00136 810961 1 G A - ReadM SNP 0035.scaffold00136 811135 1 A G - ReadM SNP 0035.scaffold00136 812030 1 A T - ReadM SNP 0035.scaffold00136 812064 1 T C - ReadM INDEL 0035.scaffold00136 812584 1 . A - ReadM SNP 0035.scaffold00136 812650 1 A T - ReadM SNP 0035.scaffold00136 812715 1 A G - ReadM SNP 0035.scaffold00136 812750 1 G T - ReadM SNP 0035.scaffold00136 812838 1 A G - ReadM SNP 0035.scaffold00136 812840 1 T G - ReadM SNP 0035.scaffold00136 812916 1 A G - ReadM SNP 0035.scaffold00136 813146 1 T C - ReadM SNP 0035.scaffold00136 813280 1 C A - Both SNP 0035.scaffold00136 813324 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 813371 1 G A - ReadM SNP 0035.scaffold00136 813420 1 A C - ReadM SNP 0035.scaffold00136 813430 1 G A - Both SNP 0035.scaffold00136 813594 1 G A scaffold3593 Both SNP 0035.scaffold00136 813619 1 C A scaffold3593 Both INDEL 0035.scaffold00136 813707 1 . A scaffold3593 ReadM SNP 0035.scaffold00136 813829 1 C A - ReadM SNP 0035.scaffold00136 813974 1 C A - ReadM SNP 0035.scaffold00136 813985 1 A G - ReadM SNP 0035.scaffold00136 814104 1 A G - ReadM SNP 0035.scaffold00136 814109 1 G A - ReadM SNP 0035.scaffold00136 814267 1 A G - ReadM SNP 0035.scaffold00136 814384 1 G T - ReadM INDEL 0035.scaffold00136 814557 1 . T - Both SNP 0035.scaffold00136 814859 1 A C scaffold3593 Both SNP 0035.scaffold00136 814868 1 T C scaffold3593 Both INDEL 0035.scaffold00136 815032 1 T . scaffold3593 ScafM SNP 0035.scaffold00136 815041 2 TC AA scaffold3593 ReadM SNP 0035.scaffold00136 815223 1 G A - ReadM SNP 0035.scaffold00136 815251 1 T A - ReadM SNP 0035.scaffold00136 815377 1 C T - ReadM SNP 0035.scaffold00136 815379 1 A G - Both SNP 0035.scaffold00136 815479 1 T C scaffold3593 Both INDEL 0035.scaffold00136 815660 1 A . scaffold3593 Both SNP 0035.scaffold00136 815720 1 C G scaffold3593 Both SNP 0035.scaffold00136 815780 1 T C scaffold3593 ScafM INDEL 0035.scaffold00136 815802 10 AGTTGTTGGT .......... scaffold3593 ReadM SNP 0035.scaffold00136 815907 1 A C - ReadM SNP 0035.scaffold00136 816083 1 T G - ReadM SNP 0035.scaffold00136 816121 1 T G - Both SNP 0035.scaffold00136 816151 1 C T scaffold3593 Both SNP 0035.scaffold00136 816250 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 816727 1 T C scaffold3593 ScafM INDEL 0035.scaffold00136 818180 1 . G scaffold2865 ScafM SNP 0035.scaffold00136 818223 1 A G scaffold2865 ScafM SNP 0035.scaffold00136 818435 1 T C scaffold2865 ScafM SNP 0035.scaffold00136 818452 1 G A scaffold2865 ScafM SNP 0035.scaffold00136 818467 1 G A scaffold2865 ScafM SNP 0035.scaffold00136 818470 1 C T scaffold2865 ScafM SNP 0035.scaffold00136 818495 2 GC AT scaffold2865 ScafM SNP 0035.scaffold00136 818995 1 C A scaffold3593 ScafM SNP 0035.scaffold00136 819046 1 G A scaffold3593 Both SNP 0035.scaffold00136 819244 1 T A scaffold3593 Both SNP 0035.scaffold00136 819341 1 G A scaffold3593 Both SNP 0035.scaffold00136 819913 1 T G scaffold3593 Both SNP 0035.scaffold00136 820088 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 820375 1 G T - ReadM SNP 0035.scaffold00136 820436 1 T C - ReadM SNP 0035.scaffold00136 820447 1 G T - Both SNP 0035.scaffold00136 820918 1 G A scaffold3593 Both SNP 0035.scaffold00136 821084 1 A C scaffold3593 Both SNP 0035.scaffold00136 821135 1 A C scaffold3593 Both SNP 0035.scaffold00136 821232 1 C A scaffold3593 Both INDEL 0035.scaffold00136 821386 2 .. CT scaffold3593 Both SNP 0035.scaffold00136 821473 1 C T scaffold3593 Both SNP 0035.scaffold00136 821495 1 G T scaffold3593 Both SNP 0035.scaffold00136 821878 1 C T scaffold3593 Both SNP 0035.scaffold00136 822424 1 T G scaffold3593 ScafM SNP 0035.scaffold00136 822590 1 A C scaffold3593 ScafM SNP 0035.scaffold00136 822597 1 G T scaffold3593 ScafM SNP 0035.scaffold00136 822645 1 G C scaffold3593 ScafM SNP 0035.scaffold00136 822653 1 G C scaffold3593 ScafM SNP 0035.scaffold00136 822660 1 G T scaffold3593 ReadM SNP 0035.scaffold00136 822981 1 A G - Both INDEL 0035.scaffold00136 823194 1 . G scaffold3593 Both SNP 0035.scaffold00136 824146 1 T C scaffold3593 Both SNP 0035.scaffold00136 824246 1 G A scaffold3593 ScafM INDEL 0035.scaffold00136 824300 3 ... GGT scaffold3593 Both INDEL 0035.scaffold00136 824703 1 . T scaffold3593 ScafM SNP 0035.scaffold00136 825911 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 825950 1 A G scaffold3593 Both SNP 0035.scaffold00136 826352 1 T G scaffold3593 Both SNP 0035.scaffold00136 826403 1 A C scaffold3593 ReadM SNP 0035.scaffold00136 826494 1 G A - ReadM SNP 0035.scaffold00136 826645 1 T G - ReadM INDEL 0035.scaffold00136 826674 1 C . - Both SNP 0035.scaffold00136 826809 1 A G scaffold3593 Both SNP 0035.scaffold00136 827788 1 A G scaffold3593 Both SNP 0035.scaffold00136 827813 1 G C scaffold3593 ReadM SNP 0035.scaffold00136 828520 1 G A - ReadM SNP 0035.scaffold00136 828816 1 C T - Both SNP 0035.scaffold00136 829033 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 829161 1 C T - Both SNP 0035.scaffold00136 829286 1 A T scaffold3593 Both SNP 0035.scaffold00136 829338 1 C A scaffold3593 Both SNP 0035.scaffold00136 829348 1 T C scaffold3593 Both SNP 0035.scaffold00136 829390 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 829692 1 C T - ScafM INDEL 0035.scaffold00136 830183 44 GGGCTTCTTTCTATTCTTTCTTTATTTGGGGGTTTTGTGGGAGG ............................................ scaffold3593 ScafM SNP 0035.scaffold00136 830354 1 T C scaffold3593 Both SNP 0035.scaffold00136 830842 1 A C scaffold3593 ScafM SNP 0035.scaffold00136 831054 1 T A scaffold3593 Both INDEL 0035.scaffold00136 831090 2 .. AA scaffold3593 Both INDEL 0035.scaffold00136 831143 2 AG .. scaffold3593 Both SNP 0035.scaffold00136 831256 1 A G scaffold3593 Both SNP 0035.scaffold00136 831629 1 T C scaffold3593 Both INDEL 0035.scaffold00136 831737 2 TT .. scaffold3593 Both SNP 0035.scaffold00136 831826 1 T A scaffold3593 Both SNP 0035.scaffold00136 831857 1 A G scaffold3593 ScafM SNP 0035.scaffold00136 831897 1 T C scaffold3593 ScafM INDEL 0035.scaffold00136 831917 2 GG .. scaffold3593 ScafM SNP 0035.scaffold00136 831920 1 G C scaffold3593 Both SNP 0035.scaffold00136 832417 1 G T scaffold3593 ScafM INDEL 0035.scaffold00136 832741 1 . T scaffold3593 Both SNP 0035.scaffold00136 832846 1 G A scaffold3593 ScafM INDEL 0035.scaffold00136 834401 28 ............................ AATTTCACTTTGAATTTGTTTGTTTTGA scaffold3593 Both SNP 0035.scaffold00136 834492 1 A G scaffold3593 Both SNP 0035.scaffold00136 834573 1 G A scaffold3593 Both SNP 0035.scaffold00136 834809 1 C T scaffold3593 Both SNP 0035.scaffold00136 834838 1 T C scaffold3593 Both SNP 0035.scaffold00136 835086 1 G A scaffold3593 Both INDEL 0035.scaffold00136 835468 1 T . scaffold3593 Both SNP 0035.scaffold00136 835741 1 T C scaffold3593 Both SNP 0035.scaffold00136 835783 1 A C scaffold3593 ScafM INDEL 0035.scaffold00136 835915 50 ATATTGCCATGGTCAGTGTAGTACTTGAACATAAGTATGCCCGAAATAGA .................................................. scaffold3593 Both SNP 0035.scaffold00136 836030 1 T C scaffold3593 Both INDEL 0035.scaffold00136 836230 1 T . scaffold3593 Both SNP 0035.scaffold00136 836442 1 T G scaffold3593 Both SNP 0035.scaffold00136 837119 1 T C scaffold3593 Both SNP 0035.scaffold00136 838413 1 G C scaffold3593 Both SNP 0035.scaffold00136 838445 1 C T scaffold3593 Both SNP 0035.scaffold00136 838898 1 A G scaffold3593 Both SNP 0035.scaffold00136 839458 1 G C scaffold3593 Both SNP 0035.scaffold00136 839634 1 C T scaffold3593 Both SNP 0035.scaffold00136 840019 1 C T scaffold3593 Both INDEL 0035.scaffold00136 840206 1 A . scaffold3593 ScafM SNP 0035.scaffold00136 840235 2 TA CT scaffold3593 ReadM SNP 0035.scaffold00136 840489 1 C T - ReadM INDEL 0035.scaffold00136 840732 3 ACA ... - ScafM SNP 0035.scaffold00136 840916 1 A G scaffold3593 ScafM SNP 0035.scaffold00136 841042 1 G C scaffold3593 Both SNP 0035.scaffold00136 841062 1 C A scaffold3593 Both SNP 0035.scaffold00136 841171 1 T C scaffold3593 Both SNP 0035.scaffold00136 841229 1 G A scaffold3593 Both INDEL 0035.scaffold00136 841246 1 . G scaffold3593 ScafM INDEL 0035.scaffold00136 841329 1 . T scaffold3593 ScafM INDEL 0035.scaffold00136 841387 3 ... CAT scaffold3593 ScafM SNP 0035.scaffold00136 841533 1 G C scaffold3593 ScafM SNP 0035.scaffold00136 841544 1 G T scaffold3593 Both SNP 0035.scaffold00136 841586 1 T C scaffold3593 ReadM SNP 0035.scaffold00136 841753 1 T C - ReadM SNP 0035.scaffold00136 841780 1 A G - ReadM INDEL 0035.scaffold00136 843070 1 . T - ReadM SNP 0035.scaffold00136 843116 1 T C - ReadM SNP 0035.scaffold00136 843355 1 C A - ScafM SNP 0035.scaffold00136 844485 1 A C scaffold3593 ScafM INDEL 0035.scaffold00136 844582 1 A . scaffold3593 ScafM SNP 0035.scaffold00136 844652 1 C T scaffold3593 ScafM INDEL 0035.scaffold00136 844707 1 . A scaffold3593 ScafM SNP 0035.scaffold00136 844777 1 C T scaffold3593 ScafM INDEL 0035.scaffold00136 844852 2 TT .. scaffold3593 ReadM SNP 0035.scaffold00136 844959 1 A G - ReadM SNP 0035.scaffold00136 844970 1 A G - Both SNP 0035.scaffold00136 845108 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 845212 1 A G - ReadM SNP 0035.scaffold00136 845453 1 C G - ReadM SNP 0035.scaffold00136 845484 1 T C - ReadM SNP 0035.scaffold00136 845539 1 G C - ReadM SNP 0035.scaffold00136 845555 1 G T - ReadM SNP 0035.scaffold00136 845610 1 G A - ReadM SNP 0035.scaffold00136 845713 1 G A - ReadM SNP 0035.scaffold00136 845745 1 A C - ReadM SNP 0035.scaffold00136 845782 1 C A - ReadM SNP 0035.scaffold00136 845786 1 A T - ReadM INDEL 0035.scaffold00136 845823 1 . A - ReadM SNP 0035.scaffold00136 846360 1 C T - ReadM SNP 0035.scaffold00136 846374 1 T C - ReadM INDEL 0035.scaffold00136 846497 2 AA .. - ReadM SNP 0035.scaffold00136 846624 1 G A - Both SNP 0035.scaffold00136 846721 1 G A scaffold3593 Both SNP 0035.scaffold00136 847065 1 G A scaffold3593 Both SNP 0035.scaffold00136 847081 1 C T scaffold3593 Both SNP 0035.scaffold00136 847159 1 T C scaffold3593 Both SNP 0035.scaffold00136 847168 1 T A scaffold3593 Both SNP 0035.scaffold00136 847194 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 847365 1 G A - ReadM SNP 0035.scaffold00136 847627 1 A C - ReadM SNP 0035.scaffold00136 848352 1 G A - ReadM SNP 0035.scaffold00136 848417 1 C T - ReadM SNP 0035.scaffold00136 850738 1 T C - ReadM SNP 0035.scaffold00136 850784 1 A T - ReadM SNP 0035.scaffold00136 850886 1 C T - ReadM SNP 0035.scaffold00136 850923 1 T A - ReadM SNP 0035.scaffold00136 851037 1 C T - ReadM SNP 0035.scaffold00136 851137 1 T C - ReadM SNP 0035.scaffold00136 851421 1 T C - ReadM SNP 0035.scaffold00136 851472 1 T C - ReadM SNP 0035.scaffold00136 851522 1 A C - ReadM INDEL 0035.scaffold00136 851783 1 C . - ReadM SNP 0035.scaffold00136 851802 1 T A - ReadM SNP 0035.scaffold00136 851881 1 T C - ReadM SNP 0035.scaffold00136 852048 1 A C - ReadM SNP 0035.scaffold00136 852160 1 G A - ReadM SNP 0035.scaffold00136 852205 1 A G - ReadM INDEL 0035.scaffold00136 852431 1 A . - ReadM SNP 0035.scaffold00136 852449 1 G A - ReadM SNP 0035.scaffold00136 852463 1 G A - ReadM SNP 0035.scaffold00136 852492 1 C T - ReadM SNP 0035.scaffold00136 852851 1 T C - ReadM SNP 0035.scaffold00136 852901 1 C G - ReadM SNP 0035.scaffold00136 852921 1 A C - ReadM SNP 0035.scaffold00136 852981 1 T C - ScafM SNP 0035.scaffold00136 853247 1 A G scaffold2031 ScafM SNP 0035.scaffold00136 853264 1 T C scaffold2031 ScafM SNP 0035.scaffold00136 853300 1 T C scaffold2031 ScafM SNP 0035.scaffold00136 853354 1 G C scaffold2031 ScafM SNP 0035.scaffold00136 853356 1 G A scaffold2031 ScafM SNP 0035.scaffold00136 853390 1 G A scaffold2031 ScafM SNP 0035.scaffold00136 853404 1 G A scaffold2031 ScafM SNP 0035.scaffold00136 855177 1 G A scaffold4905 ScafM SNP 0035.scaffold00136 855187 1 A G scaffold4905 ScafM SNP 0035.scaffold00136 855193 1 A G scaffold4905 ScafM SNP 0035.scaffold00136 855257 1 A T scaffold4905 ReadM SNP 0035.scaffold00136 855614 1 T C - ReadM SNP 0035.scaffold00136 858893 1 T G - ReadM SNP 0035.scaffold00136 858954 1 T C - ReadM SNP 0035.scaffold00136 859425 1 T A - ReadM SNP 0035.scaffold00136 861387 1 C G - ReadM SNP 0035.scaffold00136 861467 1 T C - ReadM SNP 0035.scaffold00136 862362 1 T A - ReadM SNP 0035.scaffold00136 862513 1 C T - ReadM SNP 0035.scaffold00136 862551 1 C T - ReadM SNP 0035.scaffold00136 862714 1 G A - ReadM SNP 0035.scaffold00136 862999 1 A G - ReadM SNP 0035.scaffold00136 863063 1 C T - ReadM SNP 0035.scaffold00136 863068 1 G A - ReadM SNP 0035.scaffold00136 863366 1 G A - ReadM INDEL 0035.scaffold00136 863452 1 A . - ReadM INDEL 0035.scaffold00136 863539 1 T . - ReadM SNP 0035.scaffold00136 864005 1 G C - ReadM INDEL 0035.scaffold00136 864162 2 AA .. - ReadM SNP 0035.scaffold00136 864264 1 C T - ReadM SNP 0035.scaffold00136 864514 1 G A - ReadM SNP 0035.scaffold00136 864832 1 T A - ReadM SNP 0035.scaffold00136 865260 1 G A - ReadM SNP 0035.scaffold00136 865415 1 C T - ReadM SNP 0035.scaffold00136 865604 1 A G - ReadM SNP 0035.scaffold00136 865622 1 A G - ReadM SNP 0035.scaffold00136 865937 1 G T - ReadM SNP 0035.scaffold00136 866075 1 C G - ReadM SNP 0035.scaffold00136 866111 1 G C - ReadM SNP 0035.scaffold00136 866365 1 A C - ReadM SNP 0035.scaffold00136 866391 1 T A - ReadM SNP 0035.scaffold00136 866412 1 T C - ReadM SNP 0035.scaffold00136 866570 1 G A - ReadM SNP 0035.scaffold00136 866723 1 T C - ReadM SNP 0035.scaffold00136 866864 1 T G - ReadM SNP 0035.scaffold00136 866902 1 G A - ReadM SNP 0035.scaffold00136 866981 1 A G - ReadM SNP 0035.scaffold00136 866989 1 A G - ReadM SNP 0035.scaffold00136 867008 1 A T - ReadM SNP 0035.scaffold00136 867022 1 T G - ReadM SNP 0035.scaffold00136 867052 1 C T - ReadM SNP 0035.scaffold00136 867177 1 T A - ReadM SNP 0035.scaffold00136 867283 1 T G - ReadM SNP 0035.scaffold00136 867368 1 A G - ReadM SNP 0035.scaffold00136 867374 1 C T - ReadM SNP 0035.scaffold00136 867390 1 G A - ReadM SNP 0035.scaffold00136 867596 1 C T - ReadM SNP 0035.scaffold00136 867659 1 A C - ReadM SNP 0035.scaffold00136 867793 1 T C - ReadM SNP 0035.scaffold00136 867815 1 T C - ReadM SNP 0035.scaffold00136 867876 1 A G - ReadM SNP 0035.scaffold00136 867983 1 A G - ReadM SNP 0035.scaffold00136 867994 1 T G - ReadM SNP 0035.scaffold00136 868099 1 T A - ReadM SNP 0035.scaffold00136 868120 1 C G - ReadM SNP 0035.scaffold00136 868141 1 T C - ReadM SNP 0035.scaffold00136 868257 1 G A - ReadM SNP 0035.scaffold00136 868371 1 G A - ReadM SNP 0035.scaffold00136 868390 1 A G - ReadM INDEL 0035.scaffold00136 868516 2 TT .. - ReadM SNP 0035.scaffold00136 868875 1 A C - ReadM SNP 0035.scaffold00136 868929 1 A T - ReadM SNP 0035.scaffold00136 868965 1 T C - ReadM SNP 0035.scaffold00136 869011 1 G C - ReadM SNP 0035.scaffold00136 869108 1 C T - ReadM SNP 0035.scaffold00136 869310 1 C A - ReadM SNP 0035.scaffold00136 869346 1 G A - ReadM SNP 0035.scaffold00136 869357 1 T A - ReadM SNP 0035.scaffold00136 869398 1 A T - ReadM SNP 0035.scaffold00136 869412 1 A G - ReadM SNP 0035.scaffold00136 869470 1 C T - ReadM SNP 0035.scaffold00136 869587 1 G C - ReadM SNP 0035.scaffold00136 869863 1 T G - ReadM SNP 0035.scaffold00136 869935 1 G A - ReadM SNP 0035.scaffold00136 869940 1 A C - ReadM SNP 0035.scaffold00136 869976 1 T C - ReadM SNP 0035.scaffold00136 870055 1 G A - ReadM SNP 0035.scaffold00136 870060 1 A T - ScafM SNP 0035.scaffold00136 870445 1 C T scaffold3593 ScafM SNP 0035.scaffold00136 870476 1 A T scaffold3593 ScafM SNP 0035.scaffold00136 870515 1 C A scaffold3593 ScafM SNP 0035.scaffold00136 871080 1 A G scaffold3593 ReadM SNP 0035.scaffold00136 871502 1 T A - ReadM SNP 0035.scaffold00136 871821 1 C A - ReadM SNP 0035.scaffold00136 872130 1 A T - ReadM SNP 0035.scaffold00136 872241 1 A T - ReadM SNP 0035.scaffold00136 872905 1 A C - ReadM SNP 0035.scaffold00136 872953 1 A G - ReadM SNP 0035.scaffold00136 873044 1 G A - ReadM SNP 0035.scaffold00136 874077 1 T A - ReadM SNP 0035.scaffold00136 875661 1 T A - ReadM SNP 0035.scaffold00136 875688 1 G A - ReadM SNP 0035.scaffold00136 875810 1 C T - ReadM SNP 0035.scaffold00136 875814 1 G T - ReadM SNP 0035.scaffold00136 875907 1 A G - ReadM SNP 0035.scaffold00136 875995 1 T C - ReadM SNP 0035.scaffold00136 876033 1 A G - ReadM SNP 0035.scaffold00136 876077 1 A C - ReadM SNP 0035.scaffold00136 876096 1 T C - ReadM SNP 0035.scaffold00136 876151 1 C T - ReadM SNP 0035.scaffold00136 876188 1 A G - ReadM SNP 0035.scaffold00136 876253 1 G A - ReadM SNP 0035.scaffold00136 876257 1 A G - ReadM SNP 0035.scaffold00136 876395 1 T C - ReadM SNP 0035.scaffold00136 876478 1 C T - Both SNP 0035.scaffold00136 876787 1 C T scaffold3593 Both SNP 0035.scaffold00136 876795 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 876814 1 G T scaffold3593 Both SNP 0035.scaffold00136 876884 1 C T scaffold3593 Both SNP 0035.scaffold00136 876902 1 G A scaffold3593 Both SNP 0035.scaffold00136 876957 1 T A scaffold3593 ReadM SNP 0035.scaffold00136 877100 1 G A - Both SNP 0035.scaffold00136 877353 1 T C scaffold3593 Both SNP 0035.scaffold00136 877464 1 A T scaffold3593 ReadM SNP 0035.scaffold00136 877785 1 G A - ReadM SNP 0035.scaffold00136 877881 1 C A - ReadM SNP 0035.scaffold00136 878090 1 C G - ReadM SNP 0035.scaffold00136 878140 1 T C - ReadM SNP 0035.scaffold00136 878195 1 C T - ReadM SNP 0035.scaffold00136 878313 1 G T - ReadM SNP 0035.scaffold00136 878442 1 C A - ReadM SNP 0035.scaffold00136 878572 1 A C - ReadM SNP 0035.scaffold00136 878649 1 C T - ReadM SNP 0035.scaffold00136 878880 1 T C - ReadM SNP 0035.scaffold00136 879102 1 G A - Both SNP 0035.scaffold00136 879572 1 C T scaffold3593 Both SNP 0035.scaffold00136 879683 1 A G scaffold3593 Both SNP 0035.scaffold00136 879707 1 C T scaffold3593 ScafM INDEL 0035.scaffold00136 879766 17 ................. TGACAGGTTTGAATTCT scaffold3593 ReadM INDEL 0035.scaffold00136 879903 2 TT .. - Both SNP 0035.scaffold00136 880241 1 C T scaffold3593 Both SNP 0035.scaffold00136 880466 1 A T scaffold3593 ScafM SNP 0035.scaffold00136 880567 1 G T scaffold3593 ScafM SNP 0035.scaffold00136 880624 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 880669 1 T C - ReadM SNP 0035.scaffold00136 880823 1 C T - ReadM SNP 0035.scaffold00136 880961 1 C A - ReadM SNP 0035.scaffold00136 881065 1 T G - Both SNP 0035.scaffold00136 881096 1 T C scaffold3593 ScafM INDEL 0035.scaffold00136 881167 3 ... TTT scaffold3593 Both SNP 0035.scaffold00136 881181 1 A G scaffold3593 Both SNP 0035.scaffold00136 881239 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 881398 1 T C - ReadM SNP 0035.scaffold00136 881450 1 C A - ScafM SNP 0035.scaffold00136 882746 1 A G scaffold3593 Both SNP 0035.scaffold00136 884093 1 C T scaffold3593 Both SNP 0035.scaffold00136 884396 1 G C scaffold3593 Both SNP 0035.scaffold00136 884794 1 A T scaffold3593 Both SNP 0035.scaffold00136 885097 1 A G scaffold3593 Both INDEL 0035.scaffold00136 885164 1 T . scaffold3593 ScafM INDEL 0035.scaffold00136 885266 2 .. AA scaffold3593 Both SNP 0035.scaffold00136 885312 1 T C scaffold3593 ReadM INDEL 0035.scaffold00136 885364 1 T . - Both SNP 0035.scaffold00136 885464 1 C T scaffold3593 Both SNP 0035.scaffold00136 885490 1 A G scaffold3593 Both SNP 0035.scaffold00136 885504 1 T C scaffold3593 Both SNP 0035.scaffold00136 885618 1 G A scaffold3593 Both SNP 0035.scaffold00136 885707 1 G T scaffold3593 Both SNP 0035.scaffold00136 885779 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 885933 1 T A - ReadM SNP 0035.scaffold00136 885986 1 G A - ReadM SNP 0035.scaffold00136 886173 1 G A - ReadM SNP 0035.scaffold00136 886288 1 C T - ReadM SNP 0035.scaffold00136 886292 1 G A - ReadM SNP 0035.scaffold00136 886294 1 T A - Both SNP 0035.scaffold00136 886730 1 A G scaffold3593 Both SNP 0035.scaffold00136 886783 1 A G scaffold3593 Both SNP 0035.scaffold00136 886794 1 G T scaffold3593 Both SNP 0035.scaffold00136 886823 1 C T scaffold3593 ScafM INDEL 0035.scaffold00136 886856 7 GCCTTTG ....... scaffold3593 Both SNP 0035.scaffold00136 886889 1 A T scaffold3593 Both SNP 0035.scaffold00136 887229 1 T G scaffold3593 ReadM SNP 0035.scaffold00136 887334 1 T C - ReadM SNP 0035.scaffold00136 887619 1 T C - ReadM SNP 0035.scaffold00136 887736 1 A G - ReadM INDEL 0035.scaffold00136 887762 2 .. AT - ReadM SNP 0035.scaffold00136 887956 1 T C - ReadM SNP 0035.scaffold00136 888200 1 C T - ScafM SNP 0035.scaffold00136 889322 1 T C scaffold3593 ScafM SNP 0035.scaffold00136 889340 1 T A scaffold3593 ScafM SNP 0035.scaffold00136 889383 1 A C scaffold3593 ScafM SNP 0035.scaffold00136 889412 1 A G scaffold3593 ReadM SNP 0035.scaffold00136 889474 1 A T - ReadM SNP 0035.scaffold00136 889528 1 G T - ReadM SNP 0035.scaffold00136 889564 1 C T - ScafM SNP 0035.scaffold00136 891376 1 T C scaffold3593 Both SNP 0035.scaffold00136 891441 1 A G scaffold3593 ScafM INDEL 0035.scaffold00136 891575 1 . C scaffold3593 ScafM SNP 0035.scaffold00136 891601 2 TT CC scaffold3593 ScafM SNP 0035.scaffold00136 892007 1 T C scaffold3593 ScafM SNP 0035.scaffold00136 892013 1 A T scaffold3593 ScafM SNP 0035.scaffold00136 892015 1 C T scaffold3593 Both SNP 0035.scaffold00136 892133 1 T C scaffold3593 Both SNP 0035.scaffold00136 892184 1 T C scaffold3593 ReadM SNP 0035.scaffold00136 892259 1 A G - ReadM SNP 0035.scaffold00136 892300 1 C T - ScafM SNP 0035.scaffold00136 892374 1 A G scaffold3593 ReadM SNP 0035.scaffold00136 892525 1 T A - ReadM SNP 0035.scaffold00136 892815 1 A C - ReadM SNP 0035.scaffold00136 892834 1 A G - ScafM INDEL 0035.scaffold00136 893339 6 ...... AGTAGT scaffold3593 Both SNP 0035.scaffold00136 893417 1 C G scaffold3593 ScafM SNP 0035.scaffold00136 893681 1 A T scaffold3593 ScafM INDEL 0035.scaffold00136 893828 1 A . scaffold3593 ScafM INDEL 0035.scaffold00136 894328 1 . A scaffold3593 ScafM SNP 0035.scaffold00136 895655 1 C T scaffold3593 ScafM SNP 0035.scaffold00136 895885 1 A C scaffold3593 ReadM INDEL 0035.scaffold00136 896987 3 ... TCT - ReadM INDEL 0035.scaffold00136 897375 1 . T - ReadM SNP 0035.scaffold00136 897830 1 G A - ReadM SNP 0035.scaffold00136 897893 2 GG AA - ReadM SNP 0035.scaffold00136 897914 1 C T - ReadM INDEL 0035.scaffold00136 898035 1 . T - ReadM SNP 0035.scaffold00136 898080 1 C T - ReadM SNP 0035.scaffold00136 898088 1 A G - ReadM SNP 0035.scaffold00136 898149 1 C A - ReadM SNP 0035.scaffold00136 898171 1 T C - Both SNP 0035.scaffold00136 898328 1 A G scaffold3593 Both SNP 0035.scaffold00136 898410 1 T G scaffold3593 ScafM SNP 0035.scaffold00136 898518 1 A T scaffold3593 ScafM SNP 0035.scaffold00136 898581 1 A C scaffold3593 ScafM SNP 0035.scaffold00136 899234 1 A T scaffold3593 ScafM INDEL 0035.scaffold00136 899254 3 ... AAA scaffold3593 ScafM SNP 0035.scaffold00136 899263 1 G A scaffold3593 ScafM SNP 0035.scaffold00136 899429 1 A T scaffold3593 ReadM SNP 0035.scaffold00136 900053 1 G A - ReadM SNP 0035.scaffold00136 900172 1 G A - ReadM SNP 0035.scaffold00136 900180 1 T G - ReadM SNP 0035.scaffold00136 900293 1 A G - ReadM SNP 0035.scaffold00136 900732 1 C T - Both SNP 0035.scaffold00136 900769 1 T C scaffold3593 Both INDEL 0035.scaffold00136 900859 1 . A scaffold3593 Both SNP 0035.scaffold00136 901244 1 T C scaffold3593 Both SNP 0035.scaffold00136 901306 1 T A scaffold3593 Both SNP 0035.scaffold00136 901410 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 901459 1 T A - ReadM SNP 0035.scaffold00136 901473 1 C T - ReadM SNP 0035.scaffold00136 901931 1 G A - Both INDEL 0035.scaffold00136 902274 1 . T scaffold3593 Both SNP 0035.scaffold00136 902306 1 C T scaffold3593 Both SNP 0035.scaffold00136 902311 1 G A scaffold3593 Both SNP 0035.scaffold00136 902430 1 T C scaffold3593 Both INDEL 0035.scaffold00136 902569 1 . C scaffold3593 Both SNP 0035.scaffold00136 902591 1 A G scaffold3593 Both SNP 0035.scaffold00136 902649 1 G A scaffold3593 ReadM SNP 0035.scaffold00136 902733 1 G C - ReadM SNP 0035.scaffold00136 902783 1 T C - ReadM SNP 0035.scaffold00136 903053 1 C A - ReadM SNP 0035.scaffold00136 903227 1 T A - ReadM SNP 0035.scaffold00136 903274 1 C T - ReadM SNP 0035.scaffold00136 903351 1 G A - ScafM SNP 0035.scaffold00136 904470 1 T G scaffold3593 ScafM INDEL 0035.scaffold00136 904541 1 . A scaffold3593 ScafM SNP 0035.scaffold00136 904589 1 T A scaffold3593 ScafM INDEL 0035.scaffold00136 904646 4 .... AGAG scaffold3593 ScafM SNP 0035.scaffold00136 904658 1 C G scaffold3593 ScafM SNP 0035.scaffold00136 904678 1 A G scaffold3593 ReadM SNP 0035.scaffold00136 904870 1 G A - ReadM SNP 0035.scaffold00136 905346 1 A T - ReadM SNP 0035.scaffold00136 905351 1 A T - ReadM SNP 0035.scaffold00136 905817 1 G A - ReadM SNP 0035.scaffold00136 906090 1 T C - ReadM SNP 0035.scaffold00136 906391 1 C T - ReadM SNP 0035.scaffold00136 917828 1 C T - ReadM SNP 0035.scaffold00136 917903 1 C T - ReadM INDEL 0035.scaffold00136 917956 1 . T - Both SNP 0035.scaffold00136 918278 1 C A scaffold3593 ReadM SNP 0035.scaffold00136 918448 1 T C - ReadM SNP 0035.scaffold00136 918611 1 G A - ReadM SNP 0035.scaffold00136 918839 1 A G - ReadM SNP 0035.scaffold00136 918844 1 G A - ReadM SNP 0035.scaffold00136 918865 1 G T - ScafM INDEL 0035.scaffold00136 918966 25 ......................... ATGAGTATGCACACGTGATATGAGT scaffold3593 ReadM SNP 0035.scaffold00136 919331 1 T C - ReadM SNP 0035.scaffold00136 919485 1 A T - ScafM SNP 0035.scaffold00136 920536 1 C T scaffold3593 ScafM SNP 0035.scaffold00136 920602 1 T C scaffold3593 ScafM SNP 0035.scaffold00136 920742 1 T A scaffold3593 ReadM SNP 0035.scaffold00136 920915 1 A G - ReadM SNP 0035.scaffold00136 920996 1 A T - ReadM SNP 0035.scaffold00136 921266 1 A T - ReadM SNP 0035.scaffold00136 921366 1 C G - Both INDEL 0035.scaffold00136 921608 1 . T scaffold3593 Both SNP 0035.scaffold00136 921647 1 C T scaffold3593 ReadM SNP 0035.scaffold00136 921837 1 G C - ReadM SNP 0035.scaffold00136 921846 1 C T - ReadM INDEL 0035.scaffold00136 921897 1 T . - ReadM SNP 0035.scaffold00136 921951 1 G A - ScafM SNP 0035.scaffold00136 922536 1 C T scaffold36873 ScafM SNP 0035.scaffold00136 922540 1 C A scaffold36873 ScafM SNP 0035.scaffold00136 922575 1 T G scaffold36873 ScafM SNP 0035.scaffold00136 922578 1 G T scaffold36873 ScafM INDEL 0035.scaffold00136 922592 3 ... GGC scaffold36873 ScafM SNP 0035.scaffold00136 922611 1 G A scaffold36873 ScafM INDEL 0035.scaffold00136 922643 1 . A scaffold36873 ScafM SNP 0035.scaffold00136 922662 1 A C scaffold36873 ScafM SNP 0035.scaffold00136 922666 1 T C scaffold36873 ScafM SNP 0035.scaffold00136 922677 1 C A scaffold36873 ScafM SNP 0035.scaffold00136 922683 1 G A scaffold36873 ScafM SNP 0035.scaffold00136 922722 1 A G scaffold36873 ScafM SNP 0035.scaffold00136 922728 1 G A scaffold36873 ScafM SNP 0035.scaffold00136 922730 1 A T scaffold36873 ScafM INDEL 0035.scaffold00136 922733 1 T . scaffold36873 ScafM SNP 0035.scaffold00136 922761 1 C T scaffold36873 ScafM SNP 0035.scaffold00136 922809 1 A C scaffold36873 ScafM SNP 0035.scaffold00136 922855 1 A T scaffold36873 ScafM SNP 0035.scaffold00136 922869 1 C A scaffold36873 ScafM SNP 0035.scaffold00136 922883 1 C T scaffold36873 ScafM SNP 0035.scaffold00136 922887 1 T C scaffold36873 ScafM SNP 0035.scaffold00136 922894 1 C T scaffold36873 Both SNP 0035.scaffold00136 923062 1 A G scaffold36873 ScafM INDEL 0035.scaffold00136 923488 2 TA .. scaffold54129 ScafM SNP 0035.scaffold00136 923580 2 CA TT scaffold54129 ScafM SNP 0035.scaffold00136 923595 1 G C scaffold54129 ReadM SNP 0035.scaffold00136 924101 1 T A - ReadM SNP 0035.scaffold00136 924394 1 C G - ReadM SNP 0035.scaffold00136 925474 1 G A - ReadM SNP 0035.scaffold00136 925488 1 T C - ReadM SNP 0035.scaffold00136 925500 1 C G - ReadM SNP 0035.scaffold00136 925666 1 C T - ReadM SNP 0035.scaffold00136 925806 1 A G - ReadM SNP 0035.scaffold00136 925887 1 A T - ReadM SNP 0035.scaffold00136 925967 1 T C - ReadM SNP 0035.scaffold00136 926013 1 A T - ReadM SNP 0035.scaffold00136 926029 1 G A - ReadM SNP 0035.scaffold00136 926241 1 T C - Both SNP 0035.scaffold00136 926660 1 T C scaffold21 Both INDEL 0035.scaffold00136 926668 1 C . scaffold21 Both SNP 0035.scaffold00136 926749 1 G A scaffold21 ReadM SNP 0035.scaffold00136 926829 1 T C - ReadM SNP 0035.scaffold00136 926919 1 T A - ReadM SNP 0035.scaffold00136 926955 1 C G - ReadM SNP 0035.scaffold00136 927069 1 G A - Both SNP 0035.scaffold00136 927128 1 A G scaffold21 Both SNP 0035.scaffold00136 927154 1 T A scaffold21 Both SNP 0035.scaffold00136 927172 1 C T scaffold21 ScafM INDEL 0035.scaffold00136 927204 1 . A scaffold21 ScafM SNP 0035.scaffold00136 927226 1 C G scaffold21 ScafM SNP 0035.scaffold00136 927233 1 T G scaffold21 Both INDEL 0035.scaffold00136 927264 1 . A scaffold21 Both SNP 0035.scaffold00136 927387 1 C T scaffold21 Both SNP 0035.scaffold00136 927466 1 A G scaffold21 Both SNP 0035.scaffold00136 927518 1 A T scaffold21 ScafM SNP 0035.scaffold00136 927560 1 G A scaffold21 ScafM INDEL 0035.scaffold00136 927590 1 . A scaffold21 ScafM SNP 0035.scaffold00136 927592 1 T C scaffold21 ScafM SNP 0035.scaffold00136 927627 1 C G scaffold21 ScafM INDEL 0035.scaffold00136 927637 2 AA .T scaffold21 ScafM SNP 0035.scaffold00136 927690 2 CC TA scaffold21 ScafM SNP 0035.scaffold00136 927817 1 T C scaffold21 ScafM SNP 0035.scaffold00136 927826 1 G C scaffold21 ScafM SNP 0035.scaffold00136 927834 1 T C scaffold21 ScafM SNP 0035.scaffold00136 927843 1 G A scaffold21 ScafM SNP 0035.scaffold00136 927849 1 C T scaffold21 ReadM SNP 0035.scaffold00136 928427 1 C A - ReadM SNP 0035.scaffold00136 928523 1 T C - ReadM SNP 0035.scaffold00136 928542 1 G A - ReadM SNP 0035.scaffold00136 928552 1 A G - ReadM SNP 0035.scaffold00136 928923 1 G A - ReadM SNP 0035.scaffold00136 929094 1 A G - ReadM SNP 0035.scaffold00136 929119 1 A G - ReadM SNP 0035.scaffold00136 929205 1 C T - ReadM SNP 0035.scaffold00136 929351 1 G T - ReadM SNP 0035.scaffold00136 929469 1 A G - ReadM SNP 0035.scaffold00136 929513 1 G T - ReadM SNP 0035.scaffold00136 929528 1 T C - ReadM SNP 0035.scaffold00136 929593 1 C G - ReadM SNP 0035.scaffold00136 929602 1 C A - ReadM SNP 0035.scaffold00136 930034 1 C A - ReadM SNP 0035.scaffold00136 930088 1 T A - ReadM SNP 0035.scaffold00136 930172 1 A C - ReadM SNP 0035.scaffold00136 930204 1 T G - ReadM SNP 0035.scaffold00136 930214 1 A T - ReadM SNP 0035.scaffold00136 930333 1 G A - ReadM SNP 0035.scaffold00136 930380 1 C T - ReadM SNP 0035.scaffold00136 930462 1 T G - ReadM SNP 0035.scaffold00136 930593 1 G A - ReadM SNP 0035.scaffold00136 930652 1 T C - ReadM SNP 0035.scaffold00136 930682 1 G C - ReadM SNP 0035.scaffold00136 930744 1 G A - ReadM SNP 0035.scaffold00136 930766 1 G C - ReadM SNP 0035.scaffold00136 930798 1 A T - ReadM SNP 0035.scaffold00136 930866 1 G T - ReadM SNP 0035.scaffold00136 930900 1 T C - ReadM SNP 0035.scaffold00136 931014 1 T C - ReadM SNP 0035.scaffold00136 931233 1 C T - ScafM SNP 0035.scaffold00136 931456 1 G A scaffold21 Both SNP 0035.scaffold00136 931476 1 A C scaffold21 Both SNP 0035.scaffold00136 931608 1 G A scaffold21 Both SNP 0035.scaffold00136 931626 1 A G scaffold21 Both INDEL 0035.scaffold00136 931709 1 T . scaffold21 ScafM SNP 0035.scaffold00136 931752 1 G A scaffold21 ScafM SNP 0035.scaffold00136 931755 1 C T scaffold21 ScafM SNP 0035.scaffold00136 931773 1 A G scaffold21 ScafM INDEL 0035.scaffold00136 931778 16 TTTCCCTTTTCTTTTT ................ scaffold21 ScafM INDEL 0035.scaffold00136 931797 3 CCT .GG scaffold21 ScafM SNP 0035.scaffold00136 931802 1 A G scaffold21 ScafM INDEL 0035.scaffold00136 931805 2 GC .T scaffold21 ScafM INDEL 0035.scaffold00136 931809 4 GTTC ..AA scaffold21 ScafM INDEL 0035.scaffold00136 931814 1 A . scaffold21 ScafM SNP 0035.scaffold00136 931817 1 T G scaffold21 ScafM INDEL 0035.scaffold00136 931823 1 A . scaffold21 ScafM INDEL 0035.scaffold00136 931826 3 GGG ... scaffold21 ScafM SNP 0035.scaffold00136 931830 1 G A scaffold21 ScafM INDEL 0035.scaffold00136 931832 3 CTT ..A scaffold21 ScafM INDEL 0035.scaffold00136 931838 8 AGGGGGTG ........ scaffold21 ScafM INDEL 0035.scaffold00136 931847 1 A . scaffold21 ScafM SNP 0035.scaffold00136 931850 3 AAA TCG scaffold21 ScafM SNP 0035.scaffold00136 931854 2 AC CA scaffold21 ScafM SNP 0035.scaffold00136 931918 1 G A scaffold21 ScafM SNP 0035.scaffold00136 931926 1 T A scaffold21 ScafM SNP 0035.scaffold00136 931936 1 G A scaffold21 ScafM SNP 0035.scaffold00136 931939 1 A G scaffold21 Both SNP 0035.scaffold00136 931975 1 G A scaffold21 ScafM SNP 0035.scaffold00136 932097 1 G T scaffold21 ScafM SNP 0035.scaffold00136 932108 1 C A scaffold21 Both SNP 0035.scaffold00136 932134 1 G A scaffold21 Both SNP 0035.scaffold00136 932192 1 G A scaffold21 ScafM SNP 0035.scaffold00136 932253 1 T A scaffold21 ScafM SNP 0035.scaffold00136 932306 2 TA AT scaffold21 ScafM SNP 0035.scaffold00136 932321 1 A G scaffold21 ScafM INDEL 0035.scaffold00136 932326 1 . T scaffold21 ScafM SNP 0035.scaffold00136 932328 1 A T scaffold21 ScafM INDEL 0035.scaffold00136 932338 2 .. TT scaffold21 ScafM INDEL 0035.scaffold00136 932367 2 GT .A scaffold21 Both INDEL 0035.scaffold00136 932525 1 . T scaffold21 ScafM SNP 0035.scaffold00136 932549 1 T A scaffold21 Both SNP 0035.scaffold00136 932565 1 G A scaffold21 Both SNP 0035.scaffold00136 932572 1 T C scaffold21 Both SNP 0035.scaffold00136 932580 1 T C scaffold21 ScafM SNP 0035.scaffold00136 932867 1 A G scaffold21 Both SNP 0035.scaffold00136 934106 1 T C scaffold21 ScafM SNP 0035.scaffold00136 934198 1 T A scaffold21 ScafM SNP 0035.scaffold00136 934200 1 T C scaffold21 ScafM SNP 0035.scaffold00136 934224 1 T A scaffold21 ScafM SNP 0035.scaffold00136 934235 1 C T scaffold21 ScafM SNP 0035.scaffold00136 934251 1 T C scaffold21 ScafM SNP 0035.scaffold00136 934284 1 A G scaffold21 ScafM SNP 0035.scaffold00136 934288 1 T A scaffold21 ScafM SNP 0035.scaffold00136 934318 1 C T scaffold21 Both SNP 0035.scaffold00136 934348 1 C T scaffold21 Both SNP 0035.scaffold00136 934612 1 C G scaffold21 Both INDEL 0035.scaffold00136 934664 2 .. GC scaffold21 ReadM INDEL 0035.scaffold00136 934665 2 .. CA - Both SNP 0035.scaffold00136 934752 1 T G scaffold21 Both SNP 0035.scaffold00136 934836 1 T A scaffold21 Both SNP 0035.scaffold00136 934867 1 A G scaffold21 Both INDEL 0035.scaffold00136 934929 1 . C scaffold21 ScafM SNP 0035.scaffold00136 934957 1 T C scaffold21 ScafM SNP 0035.scaffold00136 934959 2 AC TA scaffold21 ScafM SNP 0035.scaffold00136 934964 1 C T scaffold21 ScafM SNP 0035.scaffold00136 934994 1 A G scaffold21 ScafM SNP 0035.scaffold00136 935015 1 G T scaffold21 ScafM SNP 0035.scaffold00136 935030 1 G A scaffold21 ScafM SNP 0035.scaffold00136 935056 1 C T scaffold21 ScafM SNP 0035.scaffold00136 935075 2 TC CT scaffold21 ScafM SNP 0035.scaffold00136 935097 1 A T scaffold21 ScafM SNP 0035.scaffold00136 935166 1 A G scaffold21 ScafM SNP 0035.scaffold00136 935168 1 A G scaffold21 ScafM SNP 0035.scaffold00136 935176 1 T A scaffold21 Both SNP 0035.scaffold00136 935182 1 A G scaffold21 Both SNP 0035.scaffold00136 935235 1 C G scaffold21 ScafM SNP 0035.scaffold00136 935328 1 C G scaffold21 ScafM INDEL 0035.scaffold00136 935331 1 . T scaffold21 ScafM SNP 0035.scaffold00136 935336 1 G A scaffold21 ScafM SNP 0035.scaffold00136 935358 1 T G scaffold21 ScafM SNP 0035.scaffold00136 935362 1 A G scaffold21 Both SNP 0035.scaffold00136 935372 1 C T scaffold21 Both SNP 0035.scaffold00136 935426 1 G C scaffold21 ScafM SNP 0035.scaffold00136 935536 1 G A scaffold21 ScafM SNP 0035.scaffold00136 935577 1 C T scaffold21 ScafM SNP 0035.scaffold00136 935583 1 A C scaffold21 ScafM SNP 0035.scaffold00136 935603 1 G T scaffold21 Both SNP 0035.scaffold00136 935613 1 G C scaffold21 Both SNP 0035.scaffold00136 935627 1 G C scaffold21 Both SNP 0035.scaffold00136 935676 1 T A scaffold21 Both SNP 0035.scaffold00136 935722 1 T C scaffold21 Both SNP 0035.scaffold00136 935754 1 A G scaffold21 ScafM SNP 0035.scaffold00136 935759 1 G A scaffold21 ScafM SNP 0035.scaffold00136 935806 1 G A scaffold21 ScafM SNP 0035.scaffold00136 935808 1 A G scaffold21 ScafM SNP 0035.scaffold00136 935831 1 G A scaffold21 Both SNP 0035.scaffold00136 935927 1 C G scaffold21 Both SNP 0035.scaffold00136 935967 1 C T scaffold21 Both SNP 0035.scaffold00136 936016 1 G C scaffold21 Both SNP 0035.scaffold00136 936018 1 G A scaffold21 Both SNP 0035.scaffold00136 936027 1 G T scaffold21 ScafM SNP 0035.scaffold00136 936136 1 C A scaffold21 ReadM SNP 0035.scaffold00136 936191 1 G A - ScafM INDEL 0035.scaffold00136 936197 2 .G AA scaffold21 ScafM SNP 0035.scaffold00136 936280 2 TA CT scaffold21 ScafM SNP 0035.scaffold00136 936313 1 C T scaffold21 ScafM SNP 0035.scaffold00136 936328 1 C T scaffold21 ScafM SNP 0035.scaffold00136 936346 1 T C scaffold21 Both SNP 0035.scaffold00136 936364 1 G T scaffold21 Both INDEL 0035.scaffold00136 936386 2 AC .. scaffold21 Both SNP 0035.scaffold00136 936468 1 C T scaffold21 Both SNP 0035.scaffold00136 936560 1 C A scaffold21 Both SNP 0035.scaffold00136 936685 1 C T scaffold21 Both SNP 0035.scaffold00136 936775 1 A G scaffold21 Both SNP 0035.scaffold00136 936817 1 A G scaffold21 Both SNP 0035.scaffold00136 936868 1 C A scaffold21 ScafM SNP 0035.scaffold00136 936917 1 C T scaffold21 ScafM SNP 0035.scaffold00136 937000 1 T A scaffold21 ScafM SNP 0035.scaffold00136 937042 1 C T scaffold21 Both SNP 0035.scaffold00136 937090 1 C A scaffold21 Both SNP 0035.scaffold00136 937176 1 C T scaffold21 Both SNP 0035.scaffold00136 937181 1 C A scaffold21 Both SNP 0035.scaffold00136 937196 1 A C scaffold21 ScafM SNP 0035.scaffold00136 937224 1 G A scaffold21 ScafM SNP 0035.scaffold00136 937245 1 C T scaffold21 ScafM SNP 0035.scaffold00136 937453 1 T A scaffold29630 Both INDEL 0035.scaffold00136 937458 1 C . scaffold29630 Both SNP 0035.scaffold00136 937521 1 T A scaffold29630 ScafM INDEL 0035.scaffold00136 937674 2 TT .. scaffold29630 Both SNP 0035.scaffold00136 937707 1 G T scaffold29630 ScafM SNP 0035.scaffold00136 937760 1 G T scaffold29630 ScafM SNP 0035.scaffold00136 937777 1 A G scaffold29630 Both SNP 0035.scaffold00136 937881 1 T C scaffold29630 Both SNP 0035.scaffold00136 937994 1 A G scaffold29630 Both SNP 0035.scaffold00136 938025 1 T A scaffold29630 Both SNP 0035.scaffold00136 938075 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 938165 1 G A scaffold29630 Both SNP 0035.scaffold00136 938208 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 938251 1 T A scaffold29630 ScafM SNP 0035.scaffold00136 938265 1 T C scaffold29630 Both SNP 0035.scaffold00136 938278 1 T G scaffold29630 Both SNP 0035.scaffold00136 938304 1 A G scaffold29630 Both SNP 0035.scaffold00136 938334 1 A T scaffold29630 Both SNP 0035.scaffold00136 938514 1 A C scaffold29630 Both SNP 0035.scaffold00136 938532 1 C T scaffold29630 ScafM INDEL 0035.scaffold00136 938570 5 ..... TACTG scaffold29630 ScafM SNP 0035.scaffold00136 938592 1 G A scaffold29630 Both INDEL 0035.scaffold00136 938644 1 . T scaffold29630 Both SNP 0035.scaffold00136 938663 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 938739 1 A G scaffold29630 Both SNP 0035.scaffold00136 938744 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 938781 1 G A scaffold29630 Both SNP 0035.scaffold00136 938784 1 T G scaffold29630 Both SNP 0035.scaffold00136 938808 1 T G scaffold29630 Both SNP 0035.scaffold00136 938917 1 G A scaffold29630 Both SNP 0035.scaffold00136 939007 1 A T scaffold29630 Both SNP 0035.scaffold00136 939108 1 G T scaffold29630 ScafM SNP 0035.scaffold00136 939153 2 AG CA scaffold29630 Both SNP 0035.scaffold00136 939205 1 G C scaffold29630 Both SNP 0035.scaffold00136 939207 1 T A scaffold29630 ScafM SNP 0035.scaffold00136 939215 1 C G scaffold29630 Both SNP 0035.scaffold00136 939290 2 AG TT scaffold29630 Both SNP 0035.scaffold00136 939368 1 T C scaffold29630 Both SNP 0035.scaffold00136 939371 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 939383 1 C A scaffold29630 Both SNP 0035.scaffold00136 939415 1 G C scaffold29630 ScafM SNP 0035.scaffold00136 939431 1 A T scaffold29630 Both SNP 0035.scaffold00136 939458 1 G A scaffold29630 Both SNP 0035.scaffold00136 939519 1 A T scaffold29630 Both SNP 0035.scaffold00136 939545 1 C T scaffold29630 Both SNP 0035.scaffold00136 939547 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 939572 1 A G scaffold29630 Both SNP 0035.scaffold00136 939600 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 939605 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 939709 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 939772 1 C A scaffold29630 Both SNP 0035.scaffold00136 939824 1 T A scaffold29630 Both SNP 0035.scaffold00136 939870 1 T G scaffold29630 Both SNP 0035.scaffold00136 939916 1 T C scaffold29630 ScafM SNP 0035.scaffold00136 939930 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 939934 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 939950 1 C G scaffold29630 ScafM SNP 0035.scaffold00136 939957 1 T G scaffold29630 Both SNP 0035.scaffold00136 939987 1 G A scaffold29630 Both SNP 0035.scaffold00136 940003 1 G A scaffold29630 Both SNP 0035.scaffold00136 940043 1 C T scaffold29630 Both SNP 0035.scaffold00136 940083 1 G A scaffold29630 Both SNP 0035.scaffold00136 940134 1 A C scaffold29630 Both SNP 0035.scaffold00136 940170 1 C T scaffold29630 Both SNP 0035.scaffold00136 940178 1 C G scaffold29630 ScafM SNP 0035.scaffold00136 940235 1 T G scaffold29630 ScafM SNP 0035.scaffold00136 940276 1 A T scaffold29630 Both SNP 0035.scaffold00136 940289 1 A T scaffold29630 ScafM SNP 0035.scaffold00136 940292 1 A T scaffold29630 ScafM INDEL 0035.scaffold00136 940440 3 ATA ... scaffold29630 Both SNP 0035.scaffold00136 940457 1 A G scaffold29630 Both SNP 0035.scaffold00136 940520 1 A T scaffold29630 ReadM SNP 0035.scaffold00136 940600 1 G C - ScafM SNP 0035.scaffold00136 940687 1 C T scaffold29630 Both SNP 0035.scaffold00136 940717 1 T C scaffold29630 Both SNP 0035.scaffold00136 940744 1 A C scaffold29630 Both SNP 0035.scaffold00136 940763 1 A G scaffold29630 Both SNP 0035.scaffold00136 940857 1 C T scaffold29630 Both SNP 0035.scaffold00136 940890 1 A G scaffold29630 Both SNP 0035.scaffold00136 940892 1 T C scaffold29630 Both SNP 0035.scaffold00136 940956 1 C T scaffold29630 Both SNP 0035.scaffold00136 940963 1 T C scaffold29630 Both SNP 0035.scaffold00136 940987 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 941051 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 941054 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 941098 1 G A scaffold29630 ScafM SNP 0035.scaffold00136 941120 1 C T scaffold29630 ReadM SNP 0035.scaffold00136 941469 1 A G - ReadM SNP 0035.scaffold00136 941473 1 T C - ScafM SNP 0035.scaffold00136 941575 1 C G scaffold29630 ScafM SNP 0035.scaffold00136 941586 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 941652 1 T C scaffold29630 Both SNP 0035.scaffold00136 941859 1 T A scaffold29630 ReadM SNP 0035.scaffold00136 942412 1 G A - ScafM SNP 0035.scaffold00136 942520 1 T G scaffold29630 ScafM SNP 0035.scaffold00136 942552 1 C A scaffold29630 ScafM SNP 0035.scaffold00136 942610 1 T C scaffold29630 ScafM SNP 0035.scaffold00136 942649 1 T C scaffold29630 ScafM SNP 0035.scaffold00136 942697 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 942731 1 T A scaffold29630 ScafM INDEL 0035.scaffold00136 942764 4 .... AGAA scaffold29630 ScafM SNP 0035.scaffold00136 942768 1 C T scaffold29630 ScafM SNP 0035.scaffold00136 942787 1 C G scaffold29630 ScafM SNP 0035.scaffold00136 942797 1 A G scaffold29630 ScafM SNP 0035.scaffold00136 951494 1 C T scaffold5397 ScafM SNP 0035.scaffold00136 951510 1 C A scaffold5397 ReadM SNP 0035.scaffold00136 952110 1 C T - ReadM SNP 0035.scaffold00136 952320 2 TA GG - ReadM SNP 0035.scaffold00136 953105 1 C T - ReadM SNP 0035.scaffold00136 953146 1 C T - ReadM SNP 0035.scaffold00136 953267 1 A G - ReadM SNP 0035.scaffold00136 953403 1 C T - ReadM SNP 0035.scaffold00136 953465 1 G A - ReadM SNP 0035.scaffold00136 953502 1 C T - ReadM SNP 0035.scaffold00136 953509 1 T C - ReadM SNP 0035.scaffold00136 953552 1 A T - ReadM SNP 0035.scaffold00136 953604 1 G C - ReadM SNP 0035.scaffold00136 953676 1 A T - ReadM SNP 0035.scaffold00136 953841 1 A G - ReadM SNP 0035.scaffold00136 953909 1 C T - ReadM SNP 0035.scaffold00136 953917 1 T C - ReadM SNP 0035.scaffold00136 953960 1 C T - ReadM SNP 0035.scaffold00136 954037 1 A G - ReadM SNP 0035.scaffold00136 954147 1 T A - ReadM SNP 0035.scaffold00136 954149 1 G A - ReadM SNP 0035.scaffold00136 954300 1 A G - ReadM SNP 0035.scaffold00136 954347 1 G T - ReadM SNP 0035.scaffold00136 954696 1 C G - ReadM SNP 0035.scaffold00136 954715 1 T C - ReadM SNP 0035.scaffold00136 954740 1 T C - ReadM SNP 0035.scaffold00136 954742 1 G C - ReadM SNP 0035.scaffold00136 954908 1 G A - ReadM SNP 0035.scaffold00136 954955 1 C T - ReadM SNP 0035.scaffold00136 955017 1 A G - ReadM SNP 0035.scaffold00136 955076 1 T A - ReadM SNP 0035.scaffold00136 955126 1 T C - ReadM SNP 0035.scaffold00136 955343 1 G C - ReadM SNP 0035.scaffold00136 955480 1 A G - ReadM SNP 0035.scaffold00136 955750 1 A G - ReadM SNP 0035.scaffold00136 955786 1 A G - ReadM SNP 0035.scaffold00136 955802 1 A C - ReadM INDEL 0035.scaffold00136 955843 1 T . - ReadM SNP 0035.scaffold00136 955969 1 G T - ReadM SNP 0035.scaffold00136 955982 1 T C - ReadM SNP 0035.scaffold00136 956006 1 T C - ReadM SNP 0035.scaffold00136 956159 1 T C - ReadM SNP 0035.scaffold00136 956206 1 A C - ReadM SNP 0035.scaffold00136 956216 1 G T - ReadM SNP 0035.scaffold00136 956286 1 T A - ReadM SNP 0035.scaffold00136 956349 1 C A - ReadM SNP 0035.scaffold00136 956374 1 A G - ReadM SNP 0035.scaffold00136 956403 1 T C - ReadM SNP 0035.scaffold00136 956413 1 C T - ReadM SNP 0035.scaffold00136 956481 1 C T - ReadM SNP 0035.scaffold00136 956489 1 A C - ReadM SNP 0035.scaffold00136 956598 1 G T - ReadM SNP 0035.scaffold00136 956639 1 A C - ReadM SNP 0035.scaffold00136 956855 1 G A - ReadM SNP 0035.scaffold00136 956989 1 A G - ReadM SNP 0035.scaffold00136 957072 1 A G - ReadM SNP 0035.scaffold00136 957094 1 A C - ReadM SNP 0035.scaffold00136 957176 1 A C - ReadM SNP 0035.scaffold00136 957393 1 T A - ReadM SNP 0035.scaffold00136 957567 1 C T - ScafM SNP 0035.scaffold00136 957662 1 C T scaffold55300 ScafM SNP 0035.scaffold00136 957708 1 C T scaffold55300 ScafM SNP 0035.scaffold00136 957723 1 G A scaffold55300 ScafM SNP 0035.scaffold00136 957730 1 A C scaffold55300 ScafM SNP 0035.scaffold00136 957802 1 A G scaffold55300 ScafM SNP 0035.scaffold00136 957850 1 G A scaffold55300 ScafM SNP 0035.scaffold00136 957853 1 A G scaffold55300 Both SNP 0035.scaffold00136 957915 1 A G scaffold55300 ScafM INDEL 0035.scaffold00136 958023 1 T . scaffold55300 ScafM SNP 0035.scaffold00136 958047 2 GT AC scaffold55300 Both SNP 0035.scaffold00136 958171 1 T C scaffold55300 Both SNP 0035.scaffold00136 958184 1 C T scaffold55300 Both SNP 0035.scaffold00136 958294 1 G A scaffold55300 Both SNP 0035.scaffold00136 958353 1 T A scaffold55300 ScafM SNP 0035.scaffold00136 958420 1 T G scaffold55300 Both SNP 0035.scaffold00136 958528 1 C G scaffold55300 ScafM SNP 0035.scaffold00136 958627 1 A T scaffold55300 ScafM SNP 0035.scaffold00136 958633 2 CT TC scaffold55300 ScafM INDEL 0035.scaffold00136 958659 1 . A scaffold55300 ScafM SNP 0035.scaffold00136 958667 1 T G scaffold55300 ScafM SNP 0035.scaffold00136 958728 1 T A scaffold55300 ScafM SNP 0035.scaffold00136 958737 1 G A scaffold55300 ScafM SNP 0035.scaffold00136 958790 1 A C scaffold55300 ScafM SNP 0035.scaffold00136 958832 1 G A scaffold55300 ScafM SNP 0035.scaffold00136 958874 1 T C scaffold55300 ReadM SNP 0035.scaffold00136 959996 1 C A - ReadM SNP 0035.scaffold00136 960631 1 C A - ReadM SNP 0035.scaffold00136 960638 1 T C - ReadM SNP 0035.scaffold00136 960844 1 C T - ScafM SNP 0035.scaffold00136 961749 1 G T C19679341 Both INDEL 0035.scaffold00136 961909 1 A . C19679341 ScafM SNP 0035.scaffold00136 961943 2 GG TA C19679341 ScafM SNP 0035.scaffold00136 962033 1 C T C19679341 ScafM SNP 0035.scaffold00136 962141 1 G A C19679341 Both SNP 0035.scaffold00136 962299 1 C G C19679341 ReadM SNP 0035.scaffold00136 963897 1 C T - ReadM SNP 0035.scaffold00136 963920 1 T A - ReadM SNP 0035.scaffold00136 964087 1 G A - Both SNP 0035.scaffold00136 964175 1 T C scaffold37762 Both SNP 0035.scaffold00136 964386 1 T C scaffold37762 Both SNP 0035.scaffold00136 964688 1 T G scaffold37762 ReadM SNP 0035.scaffold00136 964850 1 T C - ReadM SNP 0035.scaffold00136 965062 1 G A - ReadM SNP 0035.scaffold00136 966212 1 A G - ReadM SNP 0035.scaffold00136 966301 1 T C - ReadM SNP 0035.scaffold00136 967355 1 C T - ReadM SNP 0035.scaffold00136 967420 1 T C - ReadM SNP 0035.scaffold00136 967424 1 T G - ReadM SNP 0035.scaffold00136 967443 1 C T - ReadM SNP 0035.scaffold00136 967798 1 G C - ReadM SNP 0035.scaffold00136 967815 1 G A - ReadM INDEL 0035.scaffold00136 967867 1 C . - ReadM SNP 0035.scaffold00136 968077 1 T C - ReadM SNP 0035.scaffold00136 968099 1 C T - ScafM SNP 0035.scaffold00136 968488 1 C A scaffold44276 ScafM SNP 0035.scaffold00136 968495 1 T G scaffold44276 ScafM SNP 0035.scaffold00136 971694 1 C T C19660715 ScafM SNP 0035.scaffold00136 971832 1 G A C19660715 ScafM SNP 0035.scaffold00136 971839 1 G C C19660715 ScafM SNP 0035.scaffold00136 971865 1 G T C19660715 ScafM SNP 0035.scaffold00136 971898 1 A C C19660715 Both SNP 0035.scaffold00136 972306 1 C T C19660715 Both SNP 0035.scaffold00136 972351 1 T C C19660715 ReadM SNP 0035.scaffold00136 972381 1 T C - ReadM SNP 0035.scaffold00136 972444 1 A C - ReadM SNP 0035.scaffold00136 972455 1 A G - ReadM SNP 0035.scaffold00136 972473 1 C A - ReadM SNP 0035.scaffold00136 972489 1 A G - ReadM SNP 0035.scaffold00136 972583 1 T C - ReadM SNP 0035.scaffold00136 972695 1 T A - ReadM INDEL 0035.scaffold00136 972742 2 .. CT - ReadM SNP 0035.scaffold00136 972831 1 T C - ReadM SNP 0035.scaffold00136 972843 1 A G - ReadM SNP 0035.scaffold00136 972859 1 T C - ReadM INDEL 0035.scaffold00136 972974 1 . T - ReadM SNP 0035.scaffold00136 973018 1 T A - ReadM SNP 0035.scaffold00136 973211 1 G C - ReadM SNP 0035.scaffold00136 973283 1 A T - ReadM SNP 0035.scaffold00136 973421 1 A C - ReadM SNP 0035.scaffold00136 973499 1 C G - ReadM SNP 0035.scaffold00136 973563 1 T C - ReadM SNP 0035.scaffold00136 973619 1 A G - ReadM SNP 0035.scaffold00136 973653 1 C T - ReadM SNP 0035.scaffold00136 973736 1 G A - ReadM SNP 0035.scaffold00136 973757 1 T A - ReadM SNP 0035.scaffold00136 974033 1 T C - ReadM SNP 0035.scaffold00136 974226 1 G T - ReadM SNP 0035.scaffold00136 974394 1 A T - ReadM SNP 0035.scaffold00136 974788 1 G C - ReadM SNP 0035.scaffold00136 974909 1 T C - ReadM SNP 0035.scaffold00136 975105 1 C G - ReadM SNP 0035.scaffold00136 975120 1 A G - ReadM SNP 0035.scaffold00136 975215 1 A T - ReadM SNP 0035.scaffold00136 975300 1 G T - ReadM SNP 0035.scaffold00136 975388 1 T A - ReadM SNP 0035.scaffold00136 975528 1 A T - ReadM SNP 0035.scaffold00136 975740 1 G T - ReadM SNP 0035.scaffold00136 975842 1 G C - ReadM SNP 0035.scaffold00136 975849 1 T G - ReadM INDEL 0035.scaffold00136 975894 1 . A - ReadM SNP 0035.scaffold00136 975916 1 T A - ReadM SNP 0035.scaffold00136 976285 1 A G - ReadM SNP 0035.scaffold00136 976306 1 A G - ReadM SNP 0035.scaffold00136 976420 1 A G - ReadM SNP 0035.scaffold00136 976441 1 G A - ReadM SNP 0035.scaffold00136 976503 1 A T - ReadM SNP 0035.scaffold00136 976641 1 C T - ReadM INDEL 0035.scaffold00136 976761 2 TG .. - ReadM SNP 0035.scaffold00136 976825 1 G T - ReadM SNP 0035.scaffold00136 976883 1 C T - Both SNP 0035.scaffold00136 977338 1 T C scaffold33892 ReadM SNP 0035.scaffold00136 977771 1 C A - ReadM INDEL 0035.scaffold00136 978386 1 T . - ReadM SNP 0035.scaffold00136 978605 1 A G - ReadM SNP 0035.scaffold00136 978713 1 T C - ReadM SNP 0035.scaffold00136 978778 1 G T - ReadM SNP 0035.scaffold00136 979005 1 G A - ReadM SNP 0035.scaffold00136 979434 1 G A - ReadM SNP 0035.scaffold00136 979569 1 A T - ReadM SNP 0035.scaffold00136 979731 1 C A - ReadM SNP 0035.scaffold00136 979803 1 T G - ReadM SNP 0035.scaffold00136 979850 1 G A - ReadM SNP 0035.scaffold00136 979971 1 T C - ReadM SNP 0035.scaffold00136 980056 1 C T - ReadM SNP 0035.scaffold00136 980059 1 T G - Both SNP 0035.scaffold00136 980339 1 C T scaffold30745 Both SNP 0035.scaffold00136 980462 1 G T scaffold30745 Both SNP 0035.scaffold00136 980540 1 A G scaffold30745 Both SNP 0035.scaffold00136 980663 1 T A scaffold30745 ScafM INDEL 0035.scaffold00136 980852 3 TTT ... scaffold30745 ScafM INDEL 0035.scaffold00136 980871 31 ATCATGATGCTGCTATTGTTGAATTCTCCTC ............................... scaffold30745 Both SNP 0035.scaffold00136 980926 1 G A scaffold30745 Both INDEL 0035.scaffold00136 980929 1 T . scaffold30745 Both SNP 0035.scaffold00136 981393 1 T C scaffold30745 ScafM SNP 0035.scaffold00136 981520 1 C A scaffold30745 ScafM SNP 0035.scaffold00136 981544 1 C T scaffold30745 ScafM SNP 0035.scaffold00136 981586 1 G T scaffold30745 ScafM SNP 0035.scaffold00136 981590 1 A T scaffold30745 ScafM SNP 0035.scaffold00136 981592 1 C T scaffold30745 ScafM INDEL 0035.scaffold00136 981614 3 CGG ... scaffold30745 Both SNP 0035.scaffold00136 981811 1 G T scaffold30745 Both SNP 0035.scaffold00136 981830 1 A C scaffold30745 Both SNP 0035.scaffold00136 981895 1 C G scaffold30745 Both SNP 0035.scaffold00136 982101 1 G A scaffold30745 Both SNP 0035.scaffold00136 982367 1 G C scaffold30745 Both SNP 0035.scaffold00136 982604 1 T G scaffold30745 ScafM SNP 0035.scaffold00136 982841 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 982861 1 C T scaffold30745 Both SNP 0035.scaffold00136 982975 1 T A scaffold30745 Both SNP 0035.scaffold00136 983001 1 G A scaffold30745 Both SNP 0035.scaffold00136 983057 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 983098 1 C T scaffold30745 ScafM SNP 0035.scaffold00136 983195 1 T A scaffold30745 Both SNP 0035.scaffold00136 983244 1 T G scaffold30745 Both SNP 0035.scaffold00136 983350 1 G A scaffold30745 Both SNP 0035.scaffold00136 983454 1 C T scaffold30745 Both SNP 0035.scaffold00136 983495 1 C T scaffold30745 Both SNP 0035.scaffold00136 983543 1 A C scaffold30745 Both SNP 0035.scaffold00136 983633 1 G A scaffold30745 Both SNP 0035.scaffold00136 983724 1 C G scaffold30745 ScafM SNP 0035.scaffold00136 983767 1 T C scaffold30745 ScafM SNP 0035.scaffold00136 983820 1 C G scaffold30745 ScafM SNP 0035.scaffold00136 983834 1 A G scaffold30745 Both SNP 0035.scaffold00136 983933 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 983978 2 AG GC scaffold30745 Both SNP 0035.scaffold00136 984020 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 984352 1 G T scaffold30745 ScafM SNP 0035.scaffold00136 984365 1 G A scaffold30745 Both SNP 0035.scaffold00136 984380 1 T C scaffold30745 ReadM SNP 0035.scaffold00136 984385 1 G A - ScafM SNP 0035.scaffold00136 984386 1 T C scaffold30745 ReadM SNP 0035.scaffold00136 984699 1 G A - ReadM SNP 0035.scaffold00136 984814 1 C T - ReadM SNP 0035.scaffold00136 985098 1 G C - ScafM SNP 0035.scaffold00136 991245 1 G C scaffold30745 ScafM SNP 0035.scaffold00136 991329 1 C G scaffold30745 ScafM SNP 0035.scaffold00136 991372 1 C A scaffold30745 ScafM INDEL 0035.scaffold00136 991441 1 . A scaffold30745 ScafM SNP 0035.scaffold00136 991466 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 991595 1 C T scaffold30745 ScafM SNP 0035.scaffold00136 991622 1 A T scaffold30745 ScafM SNP 0035.scaffold00136 991732 1 T A scaffold30745 ScafM SNP 0035.scaffold00136 991807 1 G A scaffold30745 ScafM SNP 0035.scaffold00136 992081 1 T C scaffold30745 ScafM INDEL 0035.scaffold00136 992097 3 TAA ... scaffold30745 ScafM SNP 0035.scaffold00136 992265 1 A G scaffold30745 ScafM SNP 0035.scaffold00136 992378 1 G A scaffold30745 ReadM SNP 0035.scaffold00136 992505 1 C A - ReadM SNP 0035.scaffold00136 992541 1 A C - ReadM SNP 0035.scaffold00136 993922 1 C T - ReadM SNP 0035.scaffold00136 994194 1 G A - ReadM SNP 0035.scaffold00136 994286 1 G A - ReadM SNP 0035.scaffold00136 994340 1 A T - ReadM SNP 0035.scaffold00136 994367 1 C A - ReadM SNP 0035.scaffold00136 994410 1 G C - ReadM SNP 0035.scaffold00136 995563 1 T A - ReadM SNP 0035.scaffold00136 995734 1 C T - ReadM SNP 0035.scaffold00136 995783 1 C T - ReadM SNP 0035.scaffold00136 995991 1 A G - ReadM SNP 0035.scaffold00136 996037 1 A G - ScafM SNP 0035.scaffold00136 996211 1 C T scaffold19507 Both SNP 0035.scaffold00136 996390 1 T A scaffold19507 Both SNP 0035.scaffold00136 996491 1 T C scaffold19507 Both INDEL 0035.scaffold00136 996668 1 . T scaffold19507 ScafM SNP 0035.scaffold00136 996671 1 A T scaffold19507 ScafM SNP 0035.scaffold00136 996740 1 C G scaffold19507 ScafM SNP 0035.scaffold00136 997020 2 TG AA scaffold19507 ScafM SNP 0035.scaffold00136 997032 1 A G scaffold19507 ScafM SNP 0035.scaffold00136 997096 1 A C scaffold19507 ScafM SNP 0035.scaffold00136 997123 1 C G scaffold19507 ScafM INDEL 0035.scaffold00136 997267 44 ............................................ ATTATATATATATAATACTAGGTTTTAGGCCCGTGCATAATGCA scaffold19507 ReadM SNP 0035.scaffold00136 997961 1 A T - ReadM SNP 0035.scaffold00136 998277 1 A G - ReadM INDEL 0035.scaffold00136 998448 1 . C - ReadM INDEL 0035.scaffold00136 998610 2 GA .. - ReadM SNP 0035.scaffold00136 998638 1 C T - ReadM INDEL 0035.scaffold00136 998793 1 . G - ReadM SNP 0035.scaffold00136 999018 1 G A - ReadM SNP 0035.scaffold00136 999040 1 G C - ReadM SNP 0035.scaffold00136 999119 1 C T - ReadM SNP 0035.scaffold00136 999285 1 A G - ReadM SNP 0035.scaffold00136 999427 1 T C - ReadM SNP 0035.scaffold00136 999661 1 T G - ReadM SNP 0035.scaffold00136 1000095 1 G A - ReadM SNP 0035.scaffold00136 1000314 1 A G - ReadM SNP 0035.scaffold00136 1000523 2 TA CG - ReadM SNP 0035.scaffold00136 1000643 1 A G - ReadM SNP 0035.scaffold00136 1000675 1 T C - ReadM SNP 0035.scaffold00136 1000702 1 C A - ReadM SNP 0035.scaffold00136 1000707 1 A G - ReadM SNP 0035.scaffold00136 1000895 1 A G - ReadM SNP 0035.scaffold00136 1000922 1 T A - ReadM SNP 0035.scaffold00136 1001122 1 A G - ReadM SNP 0035.scaffold00136 1001173 1 A G - ReadM SNP 0035.scaffold00136 1001195 1 T C - ReadM SNP 0035.scaffold00136 1001250 1 G T - ReadM SNP 0035.scaffold00136 1001255 1 G A - ReadM SNP 0035.scaffold00136 1001608 1 T A - ReadM SNP 0035.scaffold00136 1001629 1 G T - ReadM SNP 0035.scaffold00136 1001723 1 G A - ReadM SNP 0035.scaffold00136 1001860 1 G A - ReadM SNP 0035.scaffold00136 1002278 1 T C - ReadM SNP 0035.scaffold00136 1002462 1 A G - ReadM SNP 0035.scaffold00136 1002527 1 T C - ReadM SNP 0035.scaffold00136 1002651 1 A C - ReadM SNP 0035.scaffold00136 1002660 1 A G - ReadM SNP 0035.scaffold00136 1002761 1 A G - ReadM SNP 0035.scaffold00136 1003260 1 G A - ReadM SNP 0035.scaffold00136 1003368 1 A G - ReadM SNP 0035.scaffold00136 1003388 1 A G - ReadM SNP 0035.scaffold00136 1003674 1 T G - ReadM SNP 0035.scaffold00136 1004192 1 T C - ReadM SNP 0035.scaffold00136 1004322 1 A G - ReadM SNP 0035.scaffold00136 1004354 1 T A - ScafM SNP 0035.scaffold00136 1006092 1 C A scaffold18062 ScafM SNP 0035.scaffold00136 1006133 1 A T scaffold18062 ScafM INDEL 0035.scaffold00136 1006155 1 G . scaffold18062 ScafM SNP 0035.scaffold00136 1006189 1 T G scaffold18062 ReadM SNP 0035.scaffold00136 1006935 1 T G - ReadM SNP 0035.scaffold00136 1007008 1 A G - ReadM SNP 0035.scaffold00136 1007012 1 A G - ReadM SNP 0035.scaffold00136 1007202 1 C G - ReadM SNP 0035.scaffold00136 1009963 1 T C - ReadM SNP 0035.scaffold00136 1009967 1 T C - Both SNP 0035.scaffold00136 1010152 1 T C scaffold18062 Both SNP 0035.scaffold00136 1010160 1 A T scaffold18062 ScafM SNP 0035.scaffold00136 1010168 1 C T scaffold18062 Both SNP 0035.scaffold00136 1010194 1 C T scaffold18062 Both SNP 0035.scaffold00136 1010318 1 T C scaffold18062 ScafM SNP 0035.scaffold00136 1010446 1 A T scaffold18062 ReadM SNP 0035.scaffold00136 1010529 1 C G - ReadM SNP 0035.scaffold00136 1010542 1 G C - ReadM SNP 0035.scaffold00136 1010565 1 T C - ReadM SNP 0035.scaffold00136 1010580 1 T C - ReadM INDEL 0035.scaffold00136 1010584 1 A . - ScafM INDEL 0035.scaffold00136 1010703 2 .G TT scaffold18062 ScafM SNP 0035.scaffold00136 1010717 1 C T scaffold18062 ScafM SNP 0035.scaffold00136 1011020 1 G T scaffold18062 ScafM SNP 0035.scaffold00136 1011084 1 T C scaffold18062 Both SNP 0035.scaffold00136 1011204 1 A G scaffold18062 Both INDEL 0035.scaffold00136 1011218 1 A . scaffold18062 ScafM SNP 0035.scaffold00136 1011265 2 AA GG scaffold18062 ScafM INDEL 0035.scaffold00136 1011540 1 . G scaffold18062 Both SNP 0035.scaffold00136 1011628 1 C A scaffold18062 Both SNP 0035.scaffold00136 1011647 1 A G scaffold18062 Both SNP 0035.scaffold00136 1011679 1 C A scaffold18062 ReadM SNP 0035.scaffold00136 1011890 1 G A - ReadM INDEL 0035.scaffold00136 1012239 1 C . - ReadM SNP 0035.scaffold00136 1012273 1 A G - ReadM SNP 0035.scaffold00136 1012332 1 C T - ReadM SNP 0035.scaffold00136 1012405 1 G A - ReadM SNP 0035.scaffold00136 1012828 1 T C - ReadM INDEL 0035.scaffold00136 1012930 1 . T - ReadM SNP 0035.scaffold00136 1013409 1 C G - ReadM SNP 0035.scaffold00136 1013508 1 G A - ReadM SNP 0035.scaffold00136 1013534 1 C T - ReadM SNP 0035.scaffold00136 1013976 1 G T - ReadM SNP 0035.scaffold00136 1014057 1 T A - ReadM SNP 0035.scaffold00136 1014184 1 A G - ReadM SNP 0035.scaffold00136 1014272 1 C T - ReadM SNP 0035.scaffold00136 1014299 1 C T - ReadM SNP 0035.scaffold00136 1014560 1 C T - ReadM SNP 0035.scaffold00136 1014582 1 A G - ReadM SNP 0035.scaffold00136 1014656 1 T C - ReadM SNP 0035.scaffold00136 1015198 1 A G - ReadM SNP 0035.scaffold00136 1015201 1 A G - ReadM SNP 0035.scaffold00136 1015279 1 A C - ReadM SNP 0035.scaffold00136 1015302 1 A G - ReadM SNP 0035.scaffold00136 1015542 1 A G - ReadM SNP 0035.scaffold00136 1015639 1 T C - ReadM SNP 0035.scaffold00136 1015859 1 T G - ReadM SNP 0035.scaffold00136 1016426 1 A G - ReadM SNP 0035.scaffold00136 1016476 1 T G - ReadM INDEL 0035.scaffold00136 1016625 1 G . - ReadM SNP 0035.scaffold00136 1016768 1 G A - ReadM SNP 0035.scaffold00136 1016897 1 C G - ReadM SNP 0035.scaffold00136 1016901 1 A G - ReadM SNP 0035.scaffold00136 1017108 1 C T - ReadM SNP 0035.scaffold00136 1017153 1 T A - ReadM SNP 0035.scaffold00136 1017550 1 T G - ReadM SNP 0035.scaffold00136 1017639 1 G T - ReadM SNP 0035.scaffold00136 1017760 1 A T - ReadM SNP 0035.scaffold00136 1017908 1 C T - ReadM SNP 0035.scaffold00136 1017969 1 A T - ReadM SNP 0035.scaffold00136 1018204 1 A G - ReadM SNP 0035.scaffold00136 1018582 1 C T - ReadM SNP 0035.scaffold00136 1018614 1 A G - ReadM SNP 0035.scaffold00136 1018631 1 T C - ReadM SNP 0035.scaffold00136 1018825 1 T C - ReadM SNP 0035.scaffold00136 1019954 1 C T - ReadM SNP 0035.scaffold00136 1020502 1 T A - ReadM SNP 0035.scaffold00136 1020702 1 C T - ReadM SNP 0035.scaffold00136 1020847 1 T C - ReadM SNP 0035.scaffold00136 1020913 1 T C - ReadM SNP 0035.scaffold00136 1020927 1 A G - ReadM SNP 0035.scaffold00136 1020990 1 A G - ReadM SNP 0035.scaffold00136 1020996 1 T C - ReadM SNP 0035.scaffold00136 1021059 1 T C - ReadM SNP 0035.scaffold00136 1021069 1 C T - ReadM SNP 0035.scaffold00136 1021101 1 A G - ReadM SNP 0035.scaffold00136 1021254 1 T C - ReadM SNP 0035.scaffold00136 1021366 1 C T - ReadM SNP 0035.scaffold00136 1021517 1 T G - ReadM SNP 0035.scaffold00136 1021903 1 C G - Both SNP 0035.scaffold00136 1022235 1 A G scaffold10339 Both SNP 0035.scaffold00136 1022328 1 A G scaffold10339 Both SNP 0035.scaffold00136 1022428 1 G A scaffold10339 ScafM SNP 0035.scaffold00136 1022481 1 C T scaffold10339 Both SNP 0035.scaffold00136 1022525 1 C T scaffold10339 ScafM SNP 0035.scaffold00136 1022574 1 C A scaffold10339 ReadM SNP 0035.scaffold00136 1022761 1 A C - ReadM SNP 0035.scaffold00136 1022902 1 T C - ReadM SNP 0035.scaffold00136 1023088 1 C T - ReadM SNP 0035.scaffold00136 1023119 1 G C - ReadM SNP 0035.scaffold00136 1023392 1 T A - ReadM SNP 0035.scaffold00136 1023403 1 A C - Both SNP 0035.scaffold00136 1023595 1 A C scaffold10339 ScafM SNP 0035.scaffold00136 1023597 1 G A scaffold10339 Both SNP 0035.scaffold00136 1023635 1 T A scaffold10339 ScafM INDEL 0035.scaffold00136 1024477 1 . A scaffold10339 ScafM SNP 0035.scaffold00136 1024493 1 A T scaffold10339 ScafM SNP 0035.scaffold00136 1024504 1 T G scaffold10339 ScafM SNP 0035.scaffold00136 1024595 1 G A scaffold10339 ReadM SNP 0035.scaffold00136 1025125 1 A G - ScafM INDEL 0035.scaffold00136 1025341 1 G . scaffold10339 ReadM INDEL 0035.scaffold00136 1025440 1 . T - ReadM SNP 0035.scaffold00136 1025647 1 A C - ReadM SNP 0035.scaffold00136 1025730 1 G T - ScafM SNP 0035.scaffold00136 1026078 1 A T scaffold10339 ScafM SNP 0035.scaffold00136 1026138 1 G A scaffold10339 ScafM SNP 0035.scaffold00136 1026272 1 G A scaffold10339 ScafM SNP 0035.scaffold00136 1026854 1 A G scaffold10339 ScafM SNP 0035.scaffold00136 1026950 1 T C scaffold10339 ScafM SNP 0035.scaffold00136 1027040 1 T C scaffold10339 ScafM SNP 0035.scaffold00136 1027050 1 A G scaffold10339 ScafM SNP 0035.scaffold00136 1027087 1 G A scaffold10339 ScafM INDEL 0035.scaffold00136 1027088 2 .. TT scaffold10339 Both INDEL 0035.scaffold00136 1027137 1 . G scaffold10339 Both SNP 0035.scaffold00136 1027186 1 G A scaffold10339 Both SNP 0035.scaffold00136 1027194 1 A G scaffold10339 Both SNP 0035.scaffold00136 1027249 1 C G scaffold10339 ScafM INDEL 0035.scaffold00136 1027461 2 .. CA scaffold41991 ScafM SNP 0035.scaffold00136 1027463 1 A T scaffold41991 ScafM SNP 0035.scaffold00136 1027495 1 G T scaffold41991 ScafM SNP 0035.scaffold00136 1027509 1 C A scaffold41991 ScafM SNP 0035.scaffold00136 1027522 1 G A scaffold41991 ScafM SNP 0035.scaffold00136 1027525 1 G T scaffold41991 ScafM SNP 0035.scaffold00136 1027529 2 GG CA scaffold41991 ScafM SNP 0035.scaffold00136 1027558 1 G T scaffold41991 ScafM SNP 0035.scaffold00136 1027565 1 G A scaffold41991 ScafM SNP 0035.scaffold00136 1027568 1 C A scaffold41991 ScafM SNP 0035.scaffold00136 1027574 1 A T scaffold41991 ScafM SNP 0035.scaffold00136 1027580 1 T C scaffold41991 ScafM SNP 0035.scaffold00136 1027583 1 A T scaffold41991 ScafM INDEL 0035.scaffold00136 1027603 1 . A scaffold41991 ScafM SNP 0035.scaffold00136 1027608 1 A C scaffold41991 ScafM SNP 0035.scaffold00136 1027621 1 A T scaffold41991 ScafM SNP 0035.scaffold00136 1027633 1 A G scaffold41991 ScafM SNP 0035.scaffold00136 1027635 1 A C scaffold41991 ScafM SNP 0035.scaffold00136 1027653 1 C A scaffold41991 ScafM SNP 0035.scaffold00136 1027655 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027657 1 A G scaffold41991 ScafM SNP 0035.scaffold00136 1027666 1 A C scaffold41991 ScafM SNP 0035.scaffold00136 1027679 2 CC TT scaffold41991 ScafM SNP 0035.scaffold00136 1027684 3 ATC GGA scaffold41991 ScafM SNP 0035.scaffold00136 1027689 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027700 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027714 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027716 1 A G scaffold41991 ScafM SNP 0035.scaffold00136 1027718 1 C A scaffold41991 ScafM SNP 0035.scaffold00136 1027727 1 G C scaffold41991 ScafM SNP 0035.scaffold00136 1027732 1 A G scaffold41991 ScafM SNP 0035.scaffold00136 1027739 1 T C scaffold41991 ScafM SNP 0035.scaffold00136 1027773 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027795 1 C A scaffold41991 ScafM SNP 0035.scaffold00136 1027806 1 A T scaffold41991 ScafM SNP 0035.scaffold00136 1027808 1 C T scaffold41991 ScafM SNP 0035.scaffold00136 1027815 1 G C scaffold41991 ScafM SNP 0035.scaffold00136 1027832 1 T C scaffold41991 ScafM SNP 0035.scaffold00136 1027865 1 A G scaffold41991 ScafM SNP 0035.scaffold00136 1027886 1 T A scaffold41991 ScafM SNP 0035.scaffold00136 1027889 1 T A scaffold41991 ReadM SNP 0035.scaffold00136 1027931 1 T A - Both SNP 0035.scaffold00136 1028586 1 G C C19710785 ScafM SNP 0035.scaffold00136 1028651 1 C T C19710785 Both SNP 0035.scaffold00136 1028801 1 A C C19710785 Both SNP 0035.scaffold00136 1028907 1 G A C19710785 Both SNP 0035.scaffold00136 1028990 1 A T C19710785 ScafM SNP 0035.scaffold00136 1029314 1 G T C19710785 ScafM SNP 0035.scaffold00136 1029316 1 T G C19710785 Both SNP 0035.scaffold00136 1029419 1 T C C19710785 Both SNP 0035.scaffold00136 1029510 1 C T C19710785 ScafM SNP 0035.scaffold00136 1029566 1 G A C19710785 Both SNP 0035.scaffold00136 1029761 1 T A C19710785 Both SNP 0035.scaffold00136 1029763 1 T C C19710785 Both SNP 0035.scaffold00136 1029770 1 G A C19710785 ReadM SNP 0035.scaffold00136 1029798 1 T C - ReadM SNP 0035.scaffold00136 1029816 1 A G - ReadM SNP 0035.scaffold00136 1029854 1 G A - ReadM SNP 0035.scaffold00136 1029904 1 C T - ReadM SNP 0035.scaffold00136 1029962 1 T C - Both SNP 0035.scaffold00136 1030071 1 A G scaffold10339 ReadM SNP 0035.scaffold00136 1030174 1 G A - ReadM INDEL 0035.scaffold00136 1030225 1 A . - ReadM SNP 0035.scaffold00136 1030295 1 T C - Both SNP 0035.scaffold00136 1030316 1 G T scaffold10339 Both SNP 0035.scaffold00136 1030366 1 A T scaffold10339 Both SNP 0035.scaffold00136 1030485 1 A G scaffold10339 Both SNP 0035.scaffold00136 1030531 1 C G scaffold10339 Both SNP 0035.scaffold00136 1030538 1 C A scaffold10339 Both SNP 0035.scaffold00136 1030588 1 G A scaffold10339 ScafM SNP 0035.scaffold00136 1030619 1 T A scaffold10339 Both SNP 0035.scaffold00136 1030726 1 C A scaffold10339 ReadM INDEL 0035.scaffold00136 1030770 1 . A - ReadM SNP 0035.scaffold00136 1030825 1 A G - ReadM SNP 0035.scaffold00136 1031063 1 G A - ScafM SNP 0035.scaffold00136 1031192 1 A C scaffold10339 ReadM SNP 0035.scaffold00136 1031235 1 A G - ReadM SNP 0035.scaffold00136 1031299 1 T G - ReadM SNP 0035.scaffold00136 1031377 1 C T - ScafM SNP 0035.scaffold00136 1031535 1 C A scaffold10339 ScafM INDEL 0035.scaffold00136 1031536 3 ... AAG scaffold10339 ScafM SNP 0035.scaffold00136 1031553 1 C T scaffold10339 ScafM SNP 0035.scaffold00136 1031579 1 T A scaffold10339 ScafM SNP 0035.scaffold00136 1031600 1 T C scaffold10339 ReadM SNP 0035.scaffold00136 1031861 1 C T - ReadM SNP 0035.scaffold00136 1031871 1 G A - ReadM SNP 0035.scaffold00136 1031932 1 C T - ReadM INDEL 0035.scaffold00136 1031941 1 . A - ReadM SNP 0035.scaffold00136 1032010 1 T C - ReadM SNP 0035.scaffold00136 1032014 1 G A - ReadM SNP 0035.scaffold00136 1032088 1 C T - ReadM SNP 0035.scaffold00136 1032283 1 T C - ReadM SNP 0035.scaffold00136 1032297 1 T C - ReadM SNP 0035.scaffold00136 1032372 1 A T - ReadM SNP 0035.scaffold00136 1032517 1 G A - ReadM INDEL 0035.scaffold00136 1032748 2 .. TG - ReadM SNP 0035.scaffold00136 1032810 1 G C - ReadM SNP 0035.scaffold00136 1032920 1 T C - ReadM SNP 0035.scaffold00136 1033059 1 T C - ReadM SNP 0035.scaffold00136 1033449 1 G A - ReadM SNP 0035.scaffold00136 1033514 1 A T - ReadM SNP 0035.scaffold00136 1033536 1 T A - ReadM SNP 0035.scaffold00136 1033920 1 C G - ReadM SNP 0035.scaffold00136 1033925 1 T C - Both SNP 0035.scaffold00136 1034039 1 T G scaffold10339 ReadM SNP 0035.scaffold00136 1034113 1 A C - ReadM SNP 0035.scaffold00136 1034119 1 C T - ReadM SNP 0035.scaffold00136 1034186 1 C T - ReadM SNP 0035.scaffold00136 1034195 1 T G - ReadM SNP 0035.scaffold00136 1034209 1 G A - ReadM SNP 0035.scaffold00136 1034282 1 G T - ReadM SNP 0035.scaffold00136 1034438 1 G C - ReadM SNP 0035.scaffold00136 1034468 1 T G - ReadM SNP 0035.scaffold00136 1034630 1 T C - ReadM SNP 0035.scaffold00136 1034684 1 A T - ReadM SNP 0035.scaffold00136 1034699 1 T C - ReadM SNP 0035.scaffold00136 1035785 1 G A - ScafM SNP 0035.scaffold00136 1036081 1 C A scaffold10339 ScafM INDEL 0035.scaffold00136 1036094 8 TCAAATAT ........ scaffold10339 Both SNP 0035.scaffold00136 1036229 1 A T scaffold10339 Both SNP 0035.scaffold00136 1036391 1 C T scaffold10339 Both INDEL 0035.scaffold00136 1036438 1 C . scaffold10339 ReadM SNP 0035.scaffold00136 1036543 1 T A - ReadM SNP 0035.scaffold00136 1036604 1 A G - ReadM SNP 0035.scaffold00136 1036666 1 C G - ReadM SNP 0035.scaffold00136 1036791 1 G C - ReadM SNP 0035.scaffold00136 1036993 1 G A - ReadM SNP 0035.scaffold00136 1037100 1 T A - ReadM SNP 0035.scaffold00136 1037289 1 G T - ReadM SNP 0035.scaffold00136 1037307 1 C A - ReadM SNP 0035.scaffold00136 1037388 1 C T - ReadM SNP 0035.scaffold00136 1037408 1 T C - ReadM SNP 0035.scaffold00136 1037449 1 A G - ReadM INDEL 0035.scaffold00136 1037479 1 . A - ReadM SNP 0035.scaffold00136 1037528 1 G A - ReadM SNP 0035.scaffold00136 1037548 1 G T - Both SNP 0035.scaffold00136 1037773 1 T G scaffold10339 ReadM SNP 0035.scaffold00136 1037896 1 C T - ReadM SNP 0035.scaffold00136 1038006 1 T C - ReadM INDEL 0035.scaffold00136 1038817 1 . A - ReadM SNP 0035.scaffold00136 1038880 1 C A - Both SNP 0035.scaffold00136 1039004 1 A C scaffold10339 Both SNP 0035.scaffold00136 1039224 1 G A scaffold10339 ScafM INDEL 0035.scaffold00136 1039277 1 . A scaffold10339 ScafM SNP 0035.scaffold00136 1039279 1 T A scaffold10339 Both INDEL 0035.scaffold00136 1039327 1 A . scaffold10339 Both SNP 0035.scaffold00136 1039579 1 G T scaffold10339 ScafM INDEL 0035.scaffold00136 1039647 2 .. AA scaffold10339 ScafM INDEL 0035.scaffold00136 1039648 5 ..... AGCGG scaffold10339 ReadM SNP 0035.scaffold00136 1039701 1 A G - ReadM SNP 0035.scaffold00136 1040026 1 T C - ReadM SNP 0035.scaffold00136 1040030 1 A G - ReadM INDEL 0035.scaffold00136 1046598 1 A . - ReadM SNP 0035.scaffold00136 1046709 1 A T - Both SNP 0035.scaffold00136 1046881 1 T A scaffold15914 ReadM SNP 0035.scaffold00136 1046941 1 T G - ReadM SNP 0035.scaffold00136 1046945 1 T C - ReadM SNP 0035.scaffold00136 1047000 1 C T - ReadM SNP 0035.scaffold00136 1047047 1 A G - ScafM INDEL 0035.scaffold00136 1047284 3 GAT ... scaffold15914 ScafM INDEL 0035.scaffold00136 1047293 7 GTTGGCC ....... scaffold15914 Both SNP 0035.scaffold00136 1047502 1 C T scaffold15914 Both SNP 0035.scaffold00136 1047714 1 G A scaffold15914 ReadM SNP 0035.scaffold00136 1056102 1 A G - ScafM INDEL 0035.scaffold00136 1057702 4 ACTA .... scaffold3821 ScafM SNP 0035.scaffold00136 1057820 1 G C scaffold3821 ScafM SNP 0035.scaffold00136 1057823 1 T C scaffold3821 ReadM SNP 0035.scaffold00136 1057967 1 G C - Both SNP 0035.scaffold00136 1058172 1 T C scaffold3821 Both INDEL 0035.scaffold00136 1058213 2 TT .. scaffold3821 Both SNP 0035.scaffold00136 1058234 1 C G scaffold3821 Both INDEL 0035.scaffold00136 1058334 1 . C scaffold3821 Both SNP 0035.scaffold00136 1058504 1 A G scaffold3821 Both SNP 0035.scaffold00136 1058752 1 C T scaffold3821 ScafM INDEL 0035.scaffold00136 1058756 2 TT .. scaffold3821 Both SNP 0035.scaffold00136 1058864 1 A G scaffold3821 Both SNP 0035.scaffold00136 1058936 1 T A scaffold3821 Both SNP 0035.scaffold00136 1058983 1 T C scaffold3821 ScafM INDEL 0035.scaffold00136 1059007 2 AA .. scaffold3821 ScafM SNP 0035.scaffold00136 1059033 1 G C scaffold3821 Both SNP 0035.scaffold00136 1059052 1 T C scaffold3821 ScafM SNP 0035.scaffold00136 1059061 1 T C scaffold3821 Both SNP 0035.scaffold00136 1059110 1 C T scaffold3821 ReadM SNP 0035.scaffold00136 1059336 1 T G - ReadM SNP 0035.scaffold00136 1059591 1 G A - Both SNP 0035.scaffold00136 1059629 1 T C scaffold3821 Both SNP 0035.scaffold00136 1059695 1 A T scaffold3821 Both SNP 0035.scaffold00136 1059751 1 A G scaffold3821 Both SNP 0035.scaffold00136 1059770 1 G A scaffold3821 ScafM SNP 0035.scaffold00136 1059826 1 A G scaffold3821 ReadM SNP 0035.scaffold00136 1060149 1 A T - ReadM SNP 0035.scaffold00136 1060181 1 G T - ReadM SNP 0035.scaffold00136 1060262 1 A G - ScafM SNP 0035.scaffold00136 1060494 1 T C scaffold3821 ReadM INDEL 0035.scaffold00136 1060586 2 .. AC - ReadM SNP 0035.scaffold00136 1060681 1 A C - ReadM SNP 0035.scaffold00136 1060707 1 T A - ReadM SNP 0035.scaffold00136 1060892 1 G T - ReadM SNP 0035.scaffold00136 1061094 1 T C - ReadM SNP 0035.scaffold00136 1061403 1 T G - ReadM SNP 0035.scaffold00136 1061466 1 C A - ReadM SNP 0035.scaffold00136 1061735 1 G A - Both SNP 0035.scaffold00136 1061836 1 G A scaffold3821 ScafM INDEL 0035.scaffold00136 1061878 1 . A scaffold3821 Both SNP 0035.scaffold00136 1061905 1 T G scaffold3821 ReadM SNP 0035.scaffold00136 1061963 1 A G - ReadM SNP 0035.scaffold00136 1061988 1 C T - ReadM SNP 0035.scaffold00136 1062867 1 A G - ReadM SNP 0035.scaffold00136 1063870 1 T G - ReadM SNP 0035.scaffold00136 1064048 1 A G - ReadM SNP 0035.scaffold00136 1064178 1 T C - ReadM SNP 0035.scaffold00136 1064738 1 A G - ReadM SNP 0035.scaffold00136 1064754 1 A G - ReadM SNP 0035.scaffold00136 1064992 1 T C - ReadM SNP 0035.scaffold00136 1065174 1 G T - ReadM SNP 0035.scaffold00136 1065193 1 A G - ReadM SNP 0035.scaffold00136 1065241 1 C T - Both SNP 0035.scaffold00136 1065877 1 C T scaffold3821 ReadM INDEL 0035.scaffold00136 1066040 1 . A - ReadM SNP 0035.scaffold00136 1066367 1 T C - ReadM SNP 0035.scaffold00136 1066416 1 T C - ReadM SNP 0035.scaffold00136 1066518 1 T C - Both SNP 0035.scaffold00136 1066752 1 G A scaffold3821 ReadM SNP 0035.scaffold00136 1067010 1 G A - ReadM SNP 0035.scaffold00136 1067062 1 T C - ReadM SNP 0035.scaffold00136 1067104 1 G A - ReadM SNP 0035.scaffold00136 1067340 1 G A - ReadM INDEL 0035.scaffold00136 1067356 1 . G - ReadM SNP 0035.scaffold00136 1067482 1 T C - ReadM SNP 0035.scaffold00136 1067579 1 G A - ReadM SNP 0035.scaffold00136 1067658 1 C T - Both SNP 0035.scaffold00136 1068133 1 T C scaffold3821 ScafM SNP 0035.scaffold00136 1068419 1 A G scaffold3821 ScafM SNP 0035.scaffold00136 1068465 1 C T scaffold3821 ScafM INDEL 0035.scaffold00136 1068488 1 . G scaffold3821 ScafM SNP 0035.scaffold00136 1068492 1 T G scaffold3821 ScafM SNP 0035.scaffold00136 1068523 1 T C scaffold3821 ScafM SNP 0035.scaffold00136 1068567 1 G A scaffold3821 ScafM SNP 0035.scaffold00136 1068594 1 G C scaffold3821 ScafM SNP 0035.scaffold00136 1068637 1 T C scaffold3821 ReadM SNP 0035.scaffold00136 1069823 1 T C - ReadM SNP 0035.scaffold00136 1069873 1 A G - ReadM SNP 0035.scaffold00136 1069883 1 G A - ReadM SNP 0035.scaffold00136 1070037 1 A C - ReadM SNP 0035.scaffold00136 1070069 1 T C - ReadM SNP 0035.scaffold00136 1070084 1 A G - ReadM SNP 0035.scaffold00136 1070426 1 A C - ReadM SNP 0035.scaffold00136 1070768 1 T C - ReadM SNP 0035.scaffold00136 1071013 1 C T - ReadM SNP 0035.scaffold00136 1071074 1 A G - ReadM SNP 0035.scaffold00136 1071117 1 A G - ReadM SNP 0035.scaffold00136 1071141 1 A G - ReadM INDEL 0035.scaffold00136 1071567 1 . T - ScafM SNP 0035.scaffold00136 1072847 1 C G scaffold3821 ScafM SNP 0035.scaffold00136 1072867 2 GC CT scaffold3821 ScafM SNP 0035.scaffold00136 1073088 1 G A scaffold3821 ReadM SNP 0035.scaffold00136 1074655 1 A G - ReadM SNP 0035.scaffold00136 1074684 1 A G - ReadM SNP 0035.scaffold00136 1074915 1 C G - ReadM SNP 0035.scaffold00136 1075301 1 A G - ReadM SNP 0035.scaffold00136 1075820 1 T G - ReadM SNP 0035.scaffold00136 1075913 1 T A - ReadM SNP 0035.scaffold00136 1076295 1 T C - ReadM SNP 0035.scaffold00136 1076785 1 A G - Both SNP 0035.scaffold00136 1077695 1 A C scaffold3821 Both SNP 0035.scaffold00136 1077720 1 A G scaffold3821 Both SNP 0035.scaffold00136 1077830 1 C T scaffold3821 ReadM SNP 0035.scaffold00136 1077846 1 G A - ReadM SNP 0035.scaffold00136 1077851 1 G A - ReadM SNP 0035.scaffold00136 1077939 1 G A - ReadM SNP 0035.scaffold00136 1079299 1 A T - ReadM SNP 0035.scaffold00136 1079493 1 C T - ReadM SNP 0035.scaffold00136 1079677 1 C T - ReadM SNP 0035.scaffold00136 1081051 1 T A - ScafM SNP 0035.scaffold00136 1081249 1 A T scaffold3821 ScafM SNP 0035.scaffold00136 1081253 1 C G scaffold3821 ScafM INDEL 0035.scaffold00136 1081277 49 ................................................. TTTATGGTCTGCAACTGCCGTCGTTCCTACTGCTACTACCCTTGTGTGC scaffold3821 ScafM INDEL 0035.scaffold00136 1081280 1 . T scaffold3821 ScafM INDEL 0035.scaffold00136 1081281 9 ......... CTGCCTTGC scaffold3821 ScafM INDEL 0035.scaffold00136 1081283 20 .................... ATATCTCTCTCATATACATC scaffold3821 ScafM INDEL 0035.scaffold00136 1081312 1 . G scaffold3821 ScafM SNP 0035.scaffold00136 1081314 1 T G scaffold3821 Both SNP 0035.scaffold00136 1081592 1 C T scaffold3821 Both SNP 0035.scaffold00136 1081668 1 G A scaffold3821 Both SNP 0035.scaffold00136 1081717 1 C T scaffold3821 ScafM INDEL 0035.scaffold00136 1081732 1 . C scaffold3821 ReadM SNP 0035.scaffold00136 1081780 1 T C - ReadM INDEL 0035.scaffold00136 1081798 1 . A - Both SNP 0035.scaffold00136 1081848 1 A G scaffold3821 Both SNP 0035.scaffold00136 1081926 1 G A scaffold3821 ScafM SNP 0035.scaffold00136 1082462 1 G A scaffold3821 ScafM INDEL 0035.scaffold00136 1082476 3 CTA ... scaffold3821 ScafM SNP 0035.scaffold00136 1082556 1 T A scaffold3821 ScafM SNP 0035.scaffold00136 1082573 1 C T scaffold3821 ScafM SNP 0035.scaffold00136 1082591 1 G C scaffold3821 ScafM SNP 0035.scaffold00136 1082606 1 G A scaffold3821 ScafM SNP 0035.scaffold00136 1082626 1 A T scaffold3821 ScafM INDEL 0035.scaffold00136 1082828 9 ......... AGTCACACT scaffold3821 ScafM INDEL 0035.scaffold00136 1082899 2 AT .. scaffold3821 ReadM INDEL 0035.scaffold00136 1083130 1 . A - ScafM SNP 0035.scaffold00136 1083366 1 A T scaffold3821 ScafM SNP 0035.scaffold00136 1083409 1 G T scaffold3821 ScafM SNP 0035.scaffold00136 1083496 1 T C scaffold3821 ScafM SNP 0035.scaffold00136 1084107 1 G A scaffold3821 ReadM SNP 0035.scaffold00136 1084321 1 T G - ReadM SNP 0035.scaffold00136 1084814 1 T C - ReadM SNP 0035.scaffold00136 1084870 1 T C - ReadM SNP 0035.scaffold00136 1084900 1 T C - ReadM SNP 0035.scaffold00136 1085000 1 A G - ReadM SNP 0035.scaffold00136 1085151 1 A C - ReadM SNP 0035.scaffold00136 1085184 1 G A - ReadM SNP 0035.scaffold00136 1085311 1 A G - ReadM SNP 0035.scaffold00136 1085314 1 A C - ReadM SNP 0035.scaffold00136 1085331 1 A G - ReadM SNP 0035.scaffold00136 1085420 1 A G - ReadM SNP 0035.scaffold00136 1085555 1 T C - ReadM SNP 0035.scaffold00136 1085712 1 A G - ReadM SNP 0035.scaffold00136 1085748 1 C T - ReadM SNP 0035.scaffold00136 1085776 1 A T - ReadM SNP 0035.scaffold00136 1085896 1 T C - ReadM SNP 0035.scaffold00136 1086158 1 T C - ReadM INDEL 0035.scaffold00136 1086246 1 T . - ReadM SNP 0035.scaffold00136 1086572 1 A C - ReadM SNP 0035.scaffold00136 1086781 1 C A - ReadM SNP 0035.scaffold00136 1086920 1 T C - ReadM SNP 0035.scaffold00136 1086936 1 A G - Both SNP 0035.scaffold00136 1087114 1 T C scaffold48775 ReadM SNP 0035.scaffold00136 1087193 1 T C - ReadM SNP 0035.scaffold00136 1087216 1 C T - ReadM SNP 0035.scaffold00136 1087276 1 A G - ReadM SNP 0035.scaffold00136 1087369 1 C T - ReadM SNP 0035.scaffold00136 1087489 1 A T - ReadM SNP 0035.scaffold00136 1087653 1 A G - ReadM SNP 0035.scaffold00136 1087812 1 A T - ReadM SNP 0035.scaffold00136 1087833 1 G A - ReadM SNP 0035.scaffold00136 1092149 1 C T - ReadM INDEL 0035.scaffold00136 1092166 1 . A - ReadM SNP 0035.scaffold00136 1092209 1 T G - ReadM SNP 0035.scaffold00136 1092368 1 T C - ReadM SNP 0035.scaffold00136 1092426 1 T A - ReadM SNP 0035.scaffold00136 1092621 1 G A - ReadM SNP 0035.scaffold00136 1092635 1 C T - ReadM SNP 0035.scaffold00136 1092727 1 C G - ReadM SNP 0035.scaffold00136 1092731 1 A G - ReadM SNP 0035.scaffold00136 1092743 1 C T - ReadM SNP 0035.scaffold00136 1092800 1 G A - ReadM SNP 0035.scaffold00136 1092867 1 A G - ReadM SNP 0035.scaffold00136 1092934 1 T C - ReadM SNP 0035.scaffold00136 1093018 1 C T - ReadM SNP 0035.scaffold00136 1093146 1 T C - ReadM SNP 0035.scaffold00136 1093235 1 T C - ReadM INDEL 0035.scaffold00136 1093331 1 . T - ReadM SNP 0035.scaffold00136 1093415 1 A C - ReadM SNP 0035.scaffold00136 1093587 1 T C - ReadM SNP 0035.scaffold00136 1093695 1 T C - ReadM SNP 0035.scaffold00136 1093790 1 C T - ReadM SNP 0035.scaffold00136 1093846 1 T C - ReadM SNP 0035.scaffold00136 1093896 2 TT AG - ReadM SNP 0035.scaffold00136 1094016 1 A G - ReadM SNP 0035.scaffold00136 1094031 1 G T - ReadM SNP 0035.scaffold00136 1094062 1 A G - ReadM SNP 0035.scaffold00136 1094146 1 A G - ReadM SNP 0035.scaffold00136 1094349 1 A G - ScafM SNP 0035.scaffold00136 1094389 1 A C scaffold15300 Both SNP 0035.scaffold00136 1094438 2 AA GT scaffold15300 Both SNP 0035.scaffold00136 1094594 1 A G scaffold15300 ScafM SNP 0035.scaffold00136 1094663 1 A G scaffold15300 ReadM SNP 0035.scaffold00136 1097729 1 G A - ReadM SNP 0035.scaffold00136 1097759 1 T C - ReadM SNP 0035.scaffold00136 1098297 1 C T - ScafM INDEL 0036.scaffold00137 14409 1 G . scaffold3456 ScafM INDEL 0036.scaffold00137 25778 2 .. AA scaffold3456 ScafM INDEL 0036.scaffold00137 25784 1 . A scaffold3456 ReadM SNP 0036.scaffold00137 59122 1 A G - ReadM SNP 0036.scaffold00137 59138 1 G A - ReadM SNP 0036.scaffold00137 59218 1 A C - ReadM INDEL 0036.scaffold00137 59227 1 . T - ScafM SNP 0036.scaffold00137 64139 1 A G scaffold1609 ScafM SNP 0036.scaffold00137 69987 1 T G scaffold3456 ScafM INDEL 0036.scaffold00137 88508 1 . T scaffold3456 ScafM INDEL 0036.scaffold00137 114704 1 T . scaffold9540 ScafM INDEL 0036.scaffold00137 115071 2 .. AA scaffold9540 ScafM SNP 0036.scaffold00137 132785 1 T G scaffold9540 ScafM SNP 0036.scaffold00137 133155 1 C A scaffold9540 ScafM INDEL 0036.scaffold00137 133361 2 AG .T scaffold9540 ScafM INDEL 0036.scaffold00137 138309 1 . G scaffold3771 ScafM SNP 0036.scaffold00137 138317 1 A G scaffold3771 ScafM SNP 0036.scaffold00137 138385 1 G A scaffold3771 ScafM INDEL 0036.scaffold00137 138387 1 . G scaffold3771 ScafM INDEL 0036.scaffold00137 150661 4 ATGT .... scaffold10725 ScafM SNP 0036.scaffold00137 150682 1 C A scaffold10725 ScafM SNP 0036.scaffold00137 150946 2 AA TT scaffold10725 ScafM INDEL 0036.scaffold00137 150951 2 AA .. scaffold10725 ScafM SNP 0036.scaffold00137 150961 1 C G scaffold10725 ScafM INDEL 0036.scaffold00137 150970 2 AA .. scaffold10725 ScafM SNP 0036.scaffold00137 150975 1 A T scaffold10725 ScafM INDEL 0036.scaffold00137 150994 1 A . scaffold10725 ScafM SNP 0036.scaffold00137 151003 1 T C scaffold10725 ScafM INDEL 0036.scaffold00137 151107 1 G . scaffold10725 ScafM SNP 0036.scaffold00137 151110 1 T A scaffold10725 ScafM SNP 0036.scaffold00137 151112 1 A C scaffold10725 ScafM INDEL 0036.scaffold00137 151114 3 ... TTT scaffold10725 ScafM SNP 0036.scaffold00137 151127 1 A T scaffold10725 ScafM INDEL 0036.scaffold00137 151183 1 . C scaffold10725 ScafM SNP 0036.scaffold00137 151282 1 G T scaffold10725 ScafM SNP 0036.scaffold00137 151490 1 T A scaffold10725 ScafM SNP 0036.scaffold00137 151493 1 A T scaffold10725 ScafM SNP 0036.scaffold00137 151511 1 A T scaffold10725 ScafM SNP 0036.scaffold00137 151524 1 G C scaffold10725 ScafM INDEL 0036.scaffold00137 151557 1 A . scaffold10725 ScafM SNP 0036.scaffold00137 151599 1 A G scaffold10725 ScafM SNP 0036.scaffold00137 151635 1 C T scaffold10725 ScafM SNP 0036.scaffold00137 151647 1 G T scaffold10725 ScafM SNP 0036.scaffold00137 151704 1 A C scaffold10725 ScafM SNP 0036.scaffold00137 151731 1 C T scaffold10725 ScafM SNP 0036.scaffold00137 151821 1 A C scaffold10725 ScafM SNP 0036.scaffold00137 189024 1 C A scaffold2122 ScafM INDEL 0036.scaffold00137 189040 1 C . scaffold2122 ScafM INDEL 0036.scaffold00137 213902 1 A . scaffold2122 Both SNP 0036.scaffold00137 213965 1 G A scaffold2122 ScafM SNP 0036.scaffold00137 213996 1 C T scaffold2122 ScafM SNP 0036.scaffold00137 220350 1 G T scaffold2122 ScafM INDEL 0036.scaffold00137 244844 1 . T scaffold2122 ScafM SNP 0036.scaffold00137 251018 1 T G scaffold2122 ScafM INDEL 0036.scaffold00137 263742 69 TCAATGGATGATGTGGAGATTTGCAGTGTGGTGTTAGGCGAGAGAATTATGGAGTGAGGCGTATGATGA ..................................................................... scaffold2122 ScafM SNP 0036.scaffold00137 278256 1 T C scaffold17141 ScafM INDEL 0036.scaffold00137 288934 1 . A scaffold17141 ScafM INDEL 0036.scaffold00137 299474 9 ......... TTTTTTTTT scaffold17141 ScafM SNP 0036.scaffold00137 301143 1 G T scaffold17141 ScafM SNP 0036.scaffold00137 301145 1 C T scaffold17141 ScafM SNP 0036.scaffold00137 301159 1 T C scaffold17141 ScafM INDEL 0036.scaffold00137 301176 1 A . scaffold17141 ScafM SNP 0036.scaffold00137 301178 1 C A scaffold17141 ScafM SNP 0036.scaffold00137 301184 1 T C scaffold17141 ScafM SNP 0036.scaffold00137 301193 1 A T scaffold17141 ScafM SNP 0036.scaffold00137 301197 1 T A scaffold17141 ScafM SNP 0036.scaffold00137 301206 1 A C scaffold17141 ScafM SNP 0036.scaffold00137 301216 2 AG GT scaffold17141 ScafM SNP 0036.scaffold00137 301219 1 C G scaffold17141 ScafM SNP 0036.scaffold00137 301231 1 A C scaffold17141 ScafM SNP 0036.scaffold00137 301233 3 TTC CAA scaffold17141 ScafM SNP 0036.scaffold00137 301238 2 CT TC scaffold17141 ScafM SNP 0036.scaffold00137 301242 1 C G scaffold17141 ScafM SNP 0036.scaffold00137 301252 1 T A scaffold17141 ScafM SNP 0036.scaffold00137 301255 2 TG CT scaffold17141 ScafM INDEL 0036.scaffold00137 301261 2 GC .T scaffold17141 ScafM SNP 0036.scaffold00137 301264 1 A G scaffold17141 ScafM SNP 0036.scaffold00137 301267 2 TT GC scaffold17141 ScafM SNP 0036.scaffold00137 301277 2 AG GA scaffold17141 ScafM SNP 0036.scaffold00137 301321 1 C G scaffold17141 ScafM SNP 0036.scaffold00137 301338 1 A C scaffold17141 ScafM SNP 0036.scaffold00137 301351 1 C A scaffold17141 ScafM SNP 0036.scaffold00137 301355 2 AA CT scaffold17141 ScafM SNP 0036.scaffold00137 301363 1 A C scaffold17141 ScafM SNP 0036.scaffold00137 301373 1 G A scaffold17141 ScafM SNP 0036.scaffold00137 301384 1 T C scaffold17141 ScafM SNP 0036.scaffold00137 301404 1 C A scaffold17141 ScafM SNP 0036.scaffold00137 301415 1 C T scaffold17141 ScafM SNP 0036.scaffold00137 301420 1 A T scaffold17141 ScafM SNP 0036.scaffold00137 301425 1 G A scaffold17141 ScafM SNP 0036.scaffold00137 301438 1 T C scaffold17141 ScafM SNP 0036.scaffold00137 301441 1 C G scaffold17141 ScafM INDEL 0036.scaffold00137 301445 2 .A GG scaffold17141 ScafM INDEL 0036.scaffold00137 301494 2 .. GC scaffold17141 ScafM INDEL 0036.scaffold00137 301507 1 T . scaffold17141 ScafM SNP 0036.scaffold00137 301510 2 CC AA scaffold17141 ScafM INDEL 0036.scaffold00137 301514 1 . T scaffold17141 ScafM SNP 0036.scaffold00137 309338 1 A T scaffold15347 ScafM SNP 0036.scaffold00137 309340 1 T A scaffold15347 Both SNP 0036.scaffold00137 323355 1 G T scaffold5885 ScafM SNP 0036.scaffold00137 356266 1 G A scaffold2245 ScafM SNP 0036.scaffold00137 356269 1 T C scaffold2245 ScafM INDEL 0036.scaffold00137 356358 1 T . scaffold2245 ScafM SNP 0036.scaffold00137 356366 1 A C scaffold2245 ScafM SNP 0036.scaffold00137 356381 1 T C scaffold2245 ScafM SNP 0036.scaffold00137 356414 1 A T scaffold2245 ScafM SNP 0036.scaffold00137 356425 1 A T scaffold2245 ScafM INDEL 0036.scaffold00137 356429 1 . T scaffold2245 ScafM SNP 0036.scaffold00137 356515 1 A G scaffold2245 ScafM SNP 0036.scaffold00137 356536 1 T C scaffold2245 ScafM SNP 0036.scaffold00137 366343 1 T C scaffold300 ScafM INDEL 0036.scaffold00137 388273 4 TTGA .... scaffold300 ScafM INDEL 0036.scaffold00137 388282 5 GAATG ..... scaffold300 ScafM SNP 0036.scaffold00137 388291 1 C T scaffold300 ScafM INDEL 0036.scaffold00137 388293 2 AA .. scaffold300 ReadM INDEL 0036.scaffold00137 388299 1 . T - ScafM SNP 0036.scaffold00137 388299 1 C T scaffold300 ScafM SNP 0036.scaffold00137 388303 1 C T scaffold300 ScafM SNP 0036.scaffold00137 388309 1 C T scaffold300 ReadM INDEL 0036.scaffold00137 399614 1 . C - ScafM SNP 0036.scaffold00137 402202 1 C T scaffold300 ScafM SNP 0036.scaffold00137 402262 1 T A scaffold300 ScafM INDEL 0036.scaffold00137 418283 6 ATGGAG ...... scaffold300 ScafM INDEL 0036.scaffold00137 418292 7 CAGGAAG ....... scaffold300 ScafM INDEL 0036.scaffold00137 418304 2 GT .C scaffold300 ScafM SNP 0036.scaffold00137 418307 2 AT CC scaffold300 ScafM INDEL 0036.scaffold00137 424346 3 ... AAA scaffold300 ScafM INDEL 0036.scaffold00137 438910 1 T . scaffold300 ReadM INDEL 0036.scaffold00137 457843 2 AA .. - ScafM INDEL 0036.scaffold00137 461773 2 .. TT scaffold300 ScafM SNP 0036.scaffold00137 463468 1 C T scaffold2301 ScafM INDEL 0036.scaffold00137 463474 8 TTGTGGTT .......A scaffold2301 ScafM SNP 0036.scaffold00137 463483 1 A T scaffold2301 ScafM SNP 0036.scaffold00137 463491 1 C T scaffold2301 ScafM SNP 0036.scaffold00137 463532 1 G A scaffold2301 ScafM SNP 0036.scaffold00137 463535 1 C T scaffold2301 ScafM SNP 0036.scaffold00137 463550 1 C T scaffold2301 ScafM SNP 0036.scaffold00137 463603 1 A T scaffold2301 ScafM SNP 0036.scaffold00137 463640 1 T G scaffold2301 ScafM SNP 0036.scaffold00137 463674 1 G A scaffold2301 ScafM SNP 0036.scaffold00137 463683 1 C T scaffold2301 ScafM SNP 0036.scaffold00137 463693 1 C T scaffold2301 ScafM INDEL 0036.scaffold00137 463715 10 .......... TAGTCCTTAT scaffold2301 ScafM INDEL 0036.scaffold00137 463801 2 .. AA scaffold2301 ScafM INDEL 0036.scaffold00137 463802 1 . G scaffold2301 ScafM SNP 0036.scaffold00137 463879 1 G A scaffold2301 ScafM SNP 0036.scaffold00137 464649 1 C G scaffold300 ScafM INDEL 0036.scaffold00137 466086 1 . T scaffold300 ScafM SNP 0036.scaffold00137 487079 1 T C scaffold4786 ScafM SNP 0036.scaffold00137 487137 1 T C scaffold4786 ScafM INDEL 0036.scaffold00137 487142 4 .... ACAT scaffold4786 ScafM SNP 0036.scaffold00137 487207 1 T C scaffold4786 ScafM SNP 0036.scaffold00137 487266 1 G C scaffold4786 ScafM SNP 0036.scaffold00137 487377 1 A G scaffold4786 ReadM SNP 0036.scaffold00137 488447 1 T G - ScafM SNP 0036.scaffold00137 489068 1 T C scaffold300 ScafM SNP 0036.scaffold00137 489352 1 C A scaffold300 ScafM INDEL 0036.scaffold00137 489425 1 A . scaffold300 ScafM SNP 0036.scaffold00137 489429 1 A T scaffold300 ScafM SNP 0036.scaffold00137 489432 1 A C scaffold300 ScafM SNP 0036.scaffold00137 489465 2 AA TT scaffold300 ScafM SNP 0036.scaffold00137 489472 1 A C scaffold300 ScafM INDEL 0036.scaffold00137 489519 1 . G scaffold300 ScafM SNP 0036.scaffold00137 489534 1 G C scaffold300 ScafM SNP 0036.scaffold00137 489560 1 C T scaffold300 ScafM INDEL 0036.scaffold00137 489561 4 .... AAAA scaffold300 ScafM SNP 0036.scaffold00137 515953 1 C T scaffold2855 ScafM INDEL 0036.scaffold00137 525910 26 .......................... GCCCGTGGACGTAGCCAAATTGGTGA scaffold27627 ScafM INDEL 0036.scaffold00137 525932 7 ....... TTTATTG scaffold27627 ScafM INDEL 0036.scaffold00137 539899 8 AATGTGTG ........ scaffold27627 ScafM SNP 0036.scaffold00137 567007 1 G A scaffold4710 ScafM INDEL 0036.scaffold00137 567074 1 . T scaffold4710 ScafM SNP 0036.scaffold00137 567109 1 C A scaffold4710 ScafM SNP 0036.scaffold00137 567132 1 C T scaffold4710 ScafM SNP 0036.scaffold00137 568653 1 A G scaffold9967 ScafM SNP 0036.scaffold00137 585480 1 C T scaffold9967 ScafM SNP 0036.scaffold00137 585563 1 G A scaffold9967 ScafM SNP 0036.scaffold00137 585577 1 T C scaffold9967 ScafM SNP 0036.scaffold00137 585818 1 G A scaffold9967 ScafM INDEL 0036.scaffold00137 612708 1 . A scaffold9967 ScafM INDEL 0036.scaffold00137 622584 3 ... AAA scaffold9967 ReadM SNP 0036.scaffold00137 631294 1 T C - ScafM SNP 0036.scaffold00137 658770 5 TTTGT AAAAA scaffold551 ScafM INDEL 0036.scaffold00137 667685 8 GGCTTGGT ........ scaffold551 ScafM INDEL 0036.scaffold00137 671627 1 A . scaffold551 ScafM INDEL 0036.scaffold00137 672043 1 . T scaffold551 ScafM SNP 0036.scaffold00137 677717 2 AT TA scaffold551 ScafM SNP 0036.scaffold00137 678910 1 C A scaffold551 ScafM INDEL 0036.scaffold00137 678985 1 T . scaffold551 ScafM SNP 0036.scaffold00137 678991 1 G A scaffold551 ScafM INDEL 0036.scaffold00137 679006 1 . A scaffold551 Both INDEL 0036.scaffold00137 742248 1 . T scaffold20506 ScafM INDEL 0036.scaffold00137 742347 1 . A scaffold20506 ScafM INDEL 0036.scaffold00137 743967 16 ................ AGAGATGTTTTAATTA scaffold20506 ScafM SNP 0036.scaffold00137 744887 1 G A scaffold20506 ScafM SNP 0036.scaffold00137 745080 1 T C scaffold20506 ScafM INDEL 0036.scaffold00137 754448 2 .. AA scaffold2779 ScafM INDEL 0036.scaffold00137 760931 2 .. CC scaffold2779 ReadM SNP 0037.scaffold00140 10990 1 C G - ScafM SNP 0037.scaffold00140 12638 1 A T scaffold44395 ScafM SNP 0037.scaffold00140 12689 1 G A scaffold44395 ScafM SNP 0037.scaffold00140 12781 1 A G scaffold44395 ScafM INDEL 0037.scaffold00140 13055 1 . G scaffold44395 ScafM SNP 0037.scaffold00140 13058 1 A G scaffold44395 ScafM SNP 0037.scaffold00140 13085 1 T C scaffold44395 ScafM SNP 0037.scaffold00140 13098 1 T C scaffold44395 ScafM INDEL 0037.scaffold00140 13281 4 TAGG .... scaffold44395 ScafM SNP 0037.scaffold00140 13327 1 A G scaffold44395 ScafM INDEL 0037.scaffold00140 13340 1 T . scaffold44395 ScafM SNP 0037.scaffold00140 13471 1 C T scaffold44395 ScafM SNP 0037.scaffold00140 13502 1 C T scaffold44395 ScafM SNP 0037.scaffold00140 13506 1 G A scaffold44395 ScafM SNP 0037.scaffold00140 13829 1 C T scaffold52098 ScafM SNP 0037.scaffold00140 13880 1 C T scaffold52098 ScafM SNP 0037.scaffold00140 13890 1 C T scaffold52098 ScafM INDEL 0037.scaffold00140 13940 1 . C scaffold52098 ScafM SNP 0037.scaffold00140 14248 1 C A scaffold52098 ScafM SNP 0037.scaffold00140 14252 1 G T scaffold52098 ScafM INDEL 0037.scaffold00140 14267 1 . T scaffold52098 ScafM INDEL 0037.scaffold00140 14278 1 G . scaffold52098 ScafM SNP 0037.scaffold00140 14320 1 T G scaffold52098 ScafM INDEL 0037.scaffold00140 14330 8 .......A TTTGTTGG scaffold52098 ScafM SNP 0037.scaffold00140 15595 1 A G C19733620 ScafM SNP 0037.scaffold00140 15686 1 T C C19733620 ScafM SNP 0037.scaffold00140 16073 1 C A C19733620 ScafM SNP 0037.scaffold00140 16135 1 A G C19733620 ScafM SNP 0037.scaffold00140 16313 1 T G C19733620 ScafM SNP 0037.scaffold00140 16316 2 GG AT C19733620 ScafM SNP 0037.scaffold00140 16578 1 G A C19733620 ScafM SNP 0037.scaffold00140 16915 1 C T C19733620 ScafM SNP 0037.scaffold00140 17040 1 A G C19733620 ScafM SNP 0037.scaffold00140 17304 1 A G C19733620 ScafM SNP 0037.scaffold00140 38266 1 C G scaffold27359 ScafM INDEL 0037.scaffold00140 38330 8 ........ GTCTAGAG scaffold27359 ScafM SNP 0037.scaffold00140 71010 1 G A scaffold43423 ScafM SNP 0037.scaffold00140 71014 1 A T scaffold43423 ScafM SNP 0037.scaffold00140 71036 1 A G scaffold43423 ScafM SNP 0037.scaffold00140 75313 1 G A scaffold30109 ScafM SNP 0037.scaffold00140 76273 1 A G scaffold30109 ScafM SNP 0037.scaffold00140 76282 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 76444 1 G A scaffold30109 ScafM INDEL 0037.scaffold00140 76509 1 . A scaffold30109 ScafM SNP 0037.scaffold00140 76534 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 76619 1 C T scaffold30109 ScafM SNP 0037.scaffold00140 76941 1 C T scaffold30109 ScafM SNP 0037.scaffold00140 77026 1 A T scaffold30109 ScafM SNP 0037.scaffold00140 77166 1 C T scaffold30109 ScafM SNP 0037.scaffold00140 78127 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 78296 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 78695 1 A G scaffold30109 ScafM SNP 0037.scaffold00140 78790 1 G T scaffold30109 ScafM SNP 0037.scaffold00140 79305 1 A T scaffold30109 ScafM SNP 0037.scaffold00140 79806 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 79852 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 80197 1 C T scaffold30109 ScafM SNP 0037.scaffold00140 80746 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 81189 1 T C scaffold30109 ScafM SNP 0037.scaffold00140 81397 1 T A scaffold30109 ScafM SNP 0037.scaffold00140 81558 1 C T scaffold30109 ScafM INDEL 0037.scaffold00140 81652 26 .......................... TAGGCCATGGAACTCTAGGACGTTGC scaffold30109 ScafM SNP 0037.scaffold00140 82547 1 G T scaffold30109 ScafM SNP 0037.scaffold00140 82838 1 A G scaffold30109 ScafM SNP 0037.scaffold00140 83051 1 C A scaffold30109 ScafM SNP 0037.scaffold00140 83145 1 C T scaffold30109 ScafM SNP 0037.scaffold00140 83329 1 C G scaffold30109 ScafM SNP 0037.scaffold00140 83376 1 G T scaffold30109 ScafM SNP 0037.scaffold00140 83528 1 C A scaffold30109 ReadM SNP 0037.scaffold00140 83731 1 T C - ScafM SNP 0037.scaffold00140 85172 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 85178 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 85195 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 85197 1 G A scaffold18780 ScafM INDEL 0037.scaffold00140 85204 2 .. AC scaffold18780 ScafM SNP 0037.scaffold00140 85207 1 A C scaffold18780 ScafM INDEL 0037.scaffold00140 85208 4 .... TTTA scaffold18780 ScafM SNP 0037.scaffold00140 85218 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 85236 1 G C scaffold18780 ScafM INDEL 0037.scaffold00140 85240 1 G . scaffold18780 ScafM SNP 0037.scaffold00140 85254 1 G C scaffold18780 ScafM INDEL 0037.scaffold00140 85300 1 C . scaffold18780 ScafM INDEL 0037.scaffold00140 85338 5 AATGA ..... scaffold18780 ScafM SNP 0037.scaffold00140 85365 1 G C scaffold18780 ScafM SNP 0037.scaffold00140 85375 1 C A scaffold18780 ScafM SNP 0037.scaffold00140 85388 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 85400 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 85403 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 85420 1 A T scaffold18780 ScafM INDEL 0037.scaffold00140 85445 7 ATTTTGC ....... scaffold18780 ScafM INDEL 0037.scaffold00140 85474 3 CAG ... scaffold18780 ScafM INDEL 0037.scaffold00140 85533 8 TTCAATTT ........ scaffold18780 ScafM SNP 0037.scaffold00140 85603 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 85701 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 85738 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 85869 1 T A scaffold18780 ScafM INDEL 0037.scaffold00140 85960 1 T . scaffold18780 ScafM INDEL 0037.scaffold00140 85986 2 CG .A scaffold18780 ScafM SNP 0037.scaffold00140 85990 1 G A scaffold18780 ScafM INDEL 0037.scaffold00140 85994 2 .A TT scaffold18780 ScafM SNP 0037.scaffold00140 86007 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 86017 3 TGG AAA scaffold18780 ScafM SNP 0037.scaffold00140 86021 2 GT TG scaffold18780 ScafM INDEL 0037.scaffold00140 86028 1 . A scaffold18780 ScafM SNP 0037.scaffold00140 86067 1 T C scaffold18780 ScafM INDEL 0037.scaffold00140 86309 4 .... AAAG scaffold18780 ScafM SNP 0037.scaffold00140 86334 1 C G scaffold18780 ScafM INDEL 0037.scaffold00140 86364 4 TAGA .... scaffold18780 ScafM SNP 0037.scaffold00140 86543 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 86548 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 86651 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 86697 1 C G scaffold18780 ScafM SNP 0037.scaffold00140 86707 1 A T scaffold18780 ScafM INDEL 0037.scaffold00140 86726 1 . T scaffold18780 ScafM SNP 0037.scaffold00140 86924 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 88187 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 88409 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 88784 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 89444 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 90017 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 90246 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 90338 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 90659 1 C A scaffold18780 ScafM SNP 0037.scaffold00140 91032 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 91428 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 91508 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 91576 1 C G scaffold18780 ScafM SNP 0037.scaffold00140 91870 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 92067 1 G C scaffold18780 ScafM SNP 0037.scaffold00140 92084 1 T A scaffold18780 ScafM SNP 0037.scaffold00140 92363 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 92672 1 C T scaffold18780 ScafM INDEL 0037.scaffold00140 92841 1 C . scaffold18780 ScafM SNP 0037.scaffold00140 93833 1 G A scaffold45563 ScafM SNP 0037.scaffold00140 93923 1 C T scaffold45563 ScafM SNP 0037.scaffold00140 93938 1 G A scaffold45563 ScafM SNP 0037.scaffold00140 93950 1 T A scaffold45563 ScafM SNP 0037.scaffold00140 93996 1 C T scaffold45563 ScafM SNP 0037.scaffold00140 94392 1 A G scaffold45563 ScafM SNP 0037.scaffold00140 94396 1 T C scaffold45563 ScafM SNP 0037.scaffold00140 94401 1 T C scaffold45563 ScafM SNP 0037.scaffold00140 94425 2 TT GC scaffold45563 ScafM SNP 0037.scaffold00140 94457 2 TA AG scaffold45563 ScafM SNP 0037.scaffold00140 94482 1 A C scaffold45563 ScafM INDEL 0037.scaffold00140 94483 6 ...... GTCGTT scaffold45563 ScafM SNP 0037.scaffold00140 94505 1 G A scaffold45563 ScafM SNP 0037.scaffold00140 94510 1 A G scaffold45563 ScafM SNP 0037.scaffold00140 94967 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95010 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95145 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 95168 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95176 1 G T scaffold18780 ScafM SNP 0037.scaffold00140 95824 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95846 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95869 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 95897 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 95914 1 T C scaffold18780 ScafM INDEL 0037.scaffold00140 95936 2 TT .. scaffold18780 ScafM INDEL 0037.scaffold00140 95942 10 TGGGGGGGGG .......... scaffold18780 ScafM INDEL 0037.scaffold00140 95956 1 T . scaffold18780 ScafM SNP 0037.scaffold00140 96007 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 96050 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 101436 1 C T scaffold18780 ScafM INDEL 0037.scaffold00140 101438 4 .... AAAC scaffold18780 ScafM SNP 0037.scaffold00140 101484 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 101526 1 G C scaffold18780 ScafM SNP 0037.scaffold00140 101575 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 101581 1 G C scaffold18780 ScafM SNP 0037.scaffold00140 101644 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 101671 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 102623 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 102637 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 102653 1 T G scaffold18780 ScafM SNP 0037.scaffold00140 102658 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 102699 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 102735 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 102879 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 102892 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 102899 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 102953 1 C G scaffold18780 ScafM SNP 0037.scaffold00140 102964 1 G A scaffold18780 ScafM INDEL 0037.scaffold00140 102975 16 ................ CTCTTTCTCTCGTGCA scaffold18780 ScafM SNP 0037.scaffold00140 103011 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 103076 1 T C scaffold18780 ScafM INDEL 0037.scaffold00140 103082 1 . A scaffold18780 ScafM SNP 0037.scaffold00140 103207 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 103214 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 103223 1 C A scaffold18780 ScafM SNP 0037.scaffold00140 103247 1 A T scaffold18780 ScafM SNP 0037.scaffold00140 103282 1 C A scaffold18780 ScafM SNP 0037.scaffold00140 103300 1 T G scaffold18780 ScafM SNP 0037.scaffold00140 103314 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 103316 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 103325 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 103398 1 T C scaffold18780 ScafM SNP 0037.scaffold00140 103405 1 A G scaffold18780 ScafM SNP 0037.scaffold00140 103422 1 G T scaffold18780 ScafM SNP 0037.scaffold00140 103432 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 103439 1 C T scaffold18780 ScafM SNP 0037.scaffold00140 103494 1 G A scaffold18780 ScafM SNP 0037.scaffold00140 103508 1 A C scaffold18780 ScafM SNP 0037.scaffold00140 106031 1 T C scaffold5544 ScafM SNP 0037.scaffold00140 106106 1 T G scaffold5544 ScafM SNP 0037.scaffold00140 115281 2 AT GC scaffold5544 ScafM SNP 0037.scaffold00140 115303 1 T C scaffold5544 ScafM SNP 0037.scaffold00140 115333 1 G A scaffold5544 ScafM SNP 0037.scaffold00140 115377 1 A G scaffold5544 ScafM SNP 0037.scaffold00140 115381 1 G A scaffold5544 ScafM SNP 0037.scaffold00140 115389 1 T C scaffold5544 ScafM SNP 0037.scaffold00140 115399 1 C T scaffold5544 ScafM SNP 0037.scaffold00140 115988 1 G A scaffold8341 ScafM SNP 0037.scaffold00140 126675 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 126681 1 C G scaffold8462 ScafM SNP 0037.scaffold00140 127080 1 G T scaffold8341 ScafM INDEL 0037.scaffold00140 129780 1 . G scaffold8462 ScafM SNP 0037.scaffold00140 129797 1 C G scaffold8462 ScafM SNP 0037.scaffold00140 129882 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 129885 1 G A scaffold8462 ScafM SNP 0037.scaffold00140 129914 1 A G scaffold8462 ScafM SNP 0037.scaffold00140 129919 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 129996 1 C T scaffold8462 ScafM INDEL 0037.scaffold00140 130011 1 C . scaffold8462 ScafM SNP 0037.scaffold00140 130896 1 T A scaffold8462 ScafM SNP 0037.scaffold00140 131039 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 131054 1 G A scaffold8462 ScafM SNP 0037.scaffold00140 131161 1 T C scaffold8462 ScafM SNP 0037.scaffold00140 131194 1 C G scaffold8462 ScafM SNP 0037.scaffold00140 131225 1 A T scaffold8462 ScafM SNP 0037.scaffold00140 131294 1 G T scaffold8462 ScafM SNP 0037.scaffold00140 131340 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 131353 1 T G scaffold8462 ScafM SNP 0037.scaffold00140 131375 1 C T scaffold8462 ScafM SNP 0037.scaffold00140 131382 1 G T scaffold8462 ScafM SNP 0037.scaffold00140 131425 1 T G scaffold8462 ScafM INDEL 0037.scaffold00140 131453 2 TA .. scaffold8462 ScafM INDEL 0037.scaffold00140 131463 1 . A scaffold8462 ScafM INDEL 0037.scaffold00140 131485 4 TACA .... scaffold8462 ScafM SNP 0037.scaffold00140 131866 1 C T scaffold41832 ScafM SNP 0037.scaffold00140 131934 1 C A scaffold41832 Both SNP 0037.scaffold00140 131988 1 G T scaffold41832 ScafM SNP 0037.scaffold00140 132024 1 T G scaffold41832 ScafM SNP 0037.scaffold00140 132055 1 C T scaffold41832 ScafM INDEL 0037.scaffold00140 132392 2 TG .. scaffold41832 ScafM SNP 0037.scaffold00140 132403 2 AC GG scaffold41832 ScafM SNP 0037.scaffold00140 132945 1 G A scaffold41832 ScafM SNP 0037.scaffold00140 132993 1 A C scaffold41832 ScafM SNP 0037.scaffold00140 133007 1 C T scaffold41832 ScafM SNP 0037.scaffold00140 133326 1 G T scaffold41832 ScafM SNP 0037.scaffold00140 133330 1 G A scaffold41832 ScafM SNP 0037.scaffold00140 133415 1 C A scaffold41832 ScafM SNP 0037.scaffold00140 133452 1 A C scaffold41832 ScafM SNP 0037.scaffold00140 133482 1 A G scaffold41832 ScafM SNP 0037.scaffold00140 133860 1 G A scaffold41832 ScafM SNP 0037.scaffold00140 133943 1 A G scaffold41832 ScafM SNP 0037.scaffold00140 134122 1 G A scaffold41832 ScafM SNP 0037.scaffold00140 134168 1 A C scaffold41832 ScafM SNP 0037.scaffold00140 134224 1 C T scaffold41832 ScafM SNP 0037.scaffold00140 134244 1 C A scaffold41832 ScafM INDEL 0037.scaffold00140 134272 1 . G scaffold41832 ScafM SNP 0037.scaffold00140 135271 1 G A C19681643 ScafM INDEL 0037.scaffold00140 135283 1 A . C19681643 ScafM SNP 0037.scaffold00140 135343 1 G A C19681643 ScafM SNP 0037.scaffold00140 135365 1 C A C19681643 ScafM SNP 0037.scaffold00140 135720 1 A G C19681643 ScafM SNP 0037.scaffold00140 135821 1 G A C19681643 ScafM SNP 0037.scaffold00140 135898 1 G A C19681643 ScafM SNP 0037.scaffold00140 136707 1 A T scaffold11702 ScafM SNP 0037.scaffold00140 137482 1 G A scaffold69959 ScafM SNP 0037.scaffold00140 137495 1 T A scaffold69959 ScafM SNP 0037.scaffold00140 137528 1 A G scaffold69959 ScafM SNP 0037.scaffold00140 137546 1 G A scaffold69959 ScafM SNP 0037.scaffold00140 137603 1 G C scaffold69959 ScafM SNP 0037.scaffold00140 138016 1 A G scaffold69959 ScafM SNP 0037.scaffold00140 138022 1 C A scaffold69959 ScafM INDEL 0037.scaffold00140 138050 9 ......... AACCTTAAG scaffold69959 ScafM SNP 0037.scaffold00140 138057 1 A G scaffold69959 ScafM INDEL 0037.scaffold00140 138092 3 AGA ... scaffold69959 ScafM SNP 0037.scaffold00140 138105 1 A G scaffold69959 ScafM SNP 0037.scaffold00140 138177 1 G C scaffold69959 ScafM INDEL 0037.scaffold00140 138263 29 ............................. GACGAAACAAAAAGCCTAGCTTAAAAAAA scaffold69959 ScafM SNP 0037.scaffold00140 138541 1 C T scaffold69959 ScafM SNP 0037.scaffold00140 138583 1 C A scaffold69959 ScafM SNP 0037.scaffold00140 138602 1 T C scaffold69959 ScafM SNP 0037.scaffold00140 138714 1 C A scaffold69959 ScafM SNP 0037.scaffold00140 138796 1 T C scaffold69959 ScafM INDEL 0037.scaffold00140 138855 28 ............................ ATCTATATTTTTTGTTAAGGCATGACAA scaffold69959 ScafM SNP 0037.scaffold00140 138869 1 A C scaffold69959 ScafM SNP 0037.scaffold00140 138954 1 C T scaffold69959 ScafM SNP 0037.scaffold00140 139028 1 C T scaffold69959 ScafM INDEL 0037.scaffold00140 141136 9 TGTTTCGAG ......... scaffold29200 ScafM SNP 0037.scaffold00140 142393 1 A T scaffold29200 ScafM SNP 0037.scaffold00140 142498 1 T A scaffold29200 ScafM SNP 0037.scaffold00140 142507 1 C T scaffold29200 ScafM INDEL 0037.scaffold00140 142548 1 A . scaffold29200 ScafM INDEL 0037.scaffold00140 142562 1 . T scaffold29200 ScafM SNP 0037.scaffold00140 145649 1 C A C19645483 ScafM SNP 0037.scaffold00140 145741 1 A C C19645483 ScafM SNP 0037.scaffold00140 145772 1 C A C19645483 ScafM SNP 0037.scaffold00140 146010 1 T A C19645483 ScafM SNP 0037.scaffold00140 146074 1 T C C19645483 ScafM SNP 0037.scaffold00140 146219 1 T A C19645483 ScafM SNP 0037.scaffold00140 146391 1 T A C19645483 ScafM SNP 0037.scaffold00140 159136 1 A C scaffold16972 ScafM SNP 0037.scaffold00140 159158 1 T G scaffold16972 ScafM SNP 0037.scaffold00140 160907 1 A G scaffold16972 ScafM SNP 0037.scaffold00140 161778 1 C T scaffold16972 ScafM SNP 0037.scaffold00140 161893 1 G T scaffold16972 ScafM INDEL 0037.scaffold00140 162449 1 . T scaffold16972 ScafM SNP 0037.scaffold00140 162549 1 A G scaffold16972 ScafM SNP 0037.scaffold00140 162582 1 T A scaffold16972 ScafM SNP 0037.scaffold00140 162605 1 G T scaffold16972 ScafM INDEL 0037.scaffold00140 167437 1 . T scaffold5675 ScafM INDEL 0037.scaffold00140 167445 1 A . scaffold5675 ScafM SNP 0037.scaffold00140 167448 1 A C scaffold5675 ScafM SNP 0037.scaffold00140 167451 1 T C scaffold5675 ScafM SNP 0037.scaffold00140 167557 1 T C scaffold5675 ScafM SNP 0037.scaffold00140 167604 1 G T scaffold5675 ScafM SNP 0037.scaffold00140 167610 1 C T scaffold5675 ScafM INDEL 0037.scaffold00140 167623 1 . T scaffold5675 ScafM SNP 0037.scaffold00140 167673 1 C G scaffold5675 ScafM SNP 0037.scaffold00140 167697 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 167703 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 167772 1 C G scaffold5675 ScafM SNP 0037.scaffold00140 167806 2 AC GT scaffold5675 ScafM SNP 0037.scaffold00140 167858 1 C A scaffold5675 ScafM SNP 0037.scaffold00140 167875 1 C A scaffold5675 ScafM SNP 0037.scaffold00140 167899 1 T C scaffold5675 ScafM SNP 0037.scaffold00140 167914 1 C A scaffold5675 ScafM INDEL 0037.scaffold00140 167921 1 . A scaffold5675 ScafM SNP 0037.scaffold00140 167937 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 167950 1 A T scaffold5675 ScafM SNP 0037.scaffold00140 167961 2 TT CG scaffold5675 ScafM SNP 0037.scaffold00140 168034 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 168093 1 G A scaffold5675 ScafM INDEL 0037.scaffold00140 168119 1 . A scaffold5675 ScafM SNP 0037.scaffold00140 168122 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 168135 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 168183 1 T G scaffold5675 ScafM SNP 0037.scaffold00140 168189 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 168197 1 T A scaffold5675 ScafM INDEL 0037.scaffold00140 168225 1 A . scaffold5675 ScafM SNP 0037.scaffold00140 168232 1 T C scaffold5675 ScafM INDEL 0037.scaffold00140 168368 1 A . scaffold5675 ScafM SNP 0037.scaffold00140 168418 1 A G scaffold5675 ScafM INDEL 0037.scaffold00140 168464 3 GAA .TC scaffold5675 ScafM INDEL 0037.scaffold00140 168469 1 . A scaffold5675 ScafM SNP 0037.scaffold00140 168478 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 168528 1 C G scaffold5675 ScafM SNP 0037.scaffold00140 168541 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 168577 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 168641 1 T G scaffold5675 ScafM SNP 0037.scaffold00140 168644 1 C G scaffold5675 ScafM SNP 0037.scaffold00140 168665 1 T A scaffold5675 ScafM INDEL 0037.scaffold00140 168675 2 .. AA scaffold5675 ScafM SNP 0037.scaffold00140 168753 1 T C scaffold5675 ScafM SNP 0037.scaffold00140 168757 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 168818 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 168824 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 168964 1 C T scaffold5675 ScafM SNP 0037.scaffold00140 169034 2 AG CA scaffold5675 ScafM SNP 0037.scaffold00140 169064 1 T C scaffold5675 ScafM SNP 0037.scaffold00140 169074 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 169111 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 169113 1 G C scaffold5675 ScafM SNP 0037.scaffold00140 169175 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 169211 1 G A scaffold5675 ScafM SNP 0037.scaffold00140 169222 2 CA TG scaffold5675 ScafM SNP 0037.scaffold00140 169227 1 C G scaffold5675 ScafM SNP 0037.scaffold00140 169252 1 A G scaffold5675 ScafM SNP 0037.scaffold00140 169346 1 A T scaffold5675 ScafM SNP 0037.scaffold00140 169566 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 169625 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 169861 1 A C scaffold20765 ScafM SNP 0037.scaffold00140 169871 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 169921 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 170078 1 A G scaffold20765 ScafM SNP 0037.scaffold00140 170120 1 T C scaffold20765 ScafM SNP 0037.scaffold00140 170147 1 T G scaffold20765 ScafM INDEL 0037.scaffold00140 170182 1 C . scaffold20765 ScafM SNP 0037.scaffold00140 170190 1 T C scaffold20765 ScafM INDEL 0037.scaffold00140 170217 1 T . scaffold20765 ScafM INDEL 0037.scaffold00140 170220 1 C . scaffold20765 ScafM INDEL 0037.scaffold00140 170223 3 ATT ... scaffold20765 ScafM INDEL 0037.scaffold00140 170227 1 T . scaffold20765 ScafM SNP 0037.scaffold00140 170231 1 T G scaffold20765 ScafM SNP 0037.scaffold00140 170240 1 T C scaffold20765 ScafM INDEL 0037.scaffold00140 170274 1 . C scaffold20765 ScafM SNP 0037.scaffold00140 170279 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 170308 1 G A scaffold20765 ScafM SNP 0037.scaffold00140 170396 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 170400 1 G A scaffold20765 ScafM SNP 0037.scaffold00140 170565 1 G A scaffold20765 ScafM INDEL 0037.scaffold00140 170779 24 ........................ GTTTTCTATAATAATAATATAGAC scaffold20765 ScafM SNP 0037.scaffold00140 170785 1 C A scaffold20765 ScafM INDEL 0037.scaffold00140 170787 4 .... AATT scaffold20765 ScafM INDEL 0037.scaffold00140 170790 2 .. GT scaffold20765 ScafM INDEL 0037.scaffold00140 170791 1 . A scaffold20765 ScafM INDEL 0037.scaffold00140 170793 11 ........... AATATTTCATT scaffold20765 ScafM INDEL 0037.scaffold00140 170850 1 A . scaffold20765 ScafM SNP 0037.scaffold00140 170889 1 C A scaffold20765 ScafM SNP 0037.scaffold00140 170922 1 G A scaffold20765 ScafM SNP 0037.scaffold00140 171040 1 G A scaffold20765 ScafM SNP 0037.scaffold00140 171042 1 C G scaffold20765 ScafM INDEL 0037.scaffold00140 171115 9 ......... TTGCCGGCA scaffold20765 ScafM SNP 0037.scaffold00140 171161 1 C T scaffold20765 ScafM SNP 0037.scaffold00140 171356 1 T C scaffold20765 ScafM SNP 0037.scaffold00140 173358 1 T C scaffold41525 ScafM SNP 0037.scaffold00140 173382 1 C T scaffold41525 ScafM SNP 0037.scaffold00140 173390 1 T C scaffold41525 ScafM SNP 0037.scaffold00140 173399 1 T C scaffold41525 ScafM SNP 0037.scaffold00140 173487 1 C T scaffold41525 ScafM SNP 0037.scaffold00140 194243 1 A C scaffold9106 ScafM SNP 0037.scaffold00140 194266 1 C G scaffold9106 ScafM SNP 0037.scaffold00140 194301 1 A C scaffold9106 ScafM SNP 0037.scaffold00140 194388 1 G C scaffold9106 ScafM SNP 0037.scaffold00140 194398 1 G A scaffold9106 ScafM SNP 0037.scaffold00140 194859 1 C T scaffold56826 ScafM SNP 0037.scaffold00140 194935 1 A G scaffold56826 ScafM SNP 0037.scaffold00140 195820 1 A G scaffold37364 ScafM INDEL 0037.scaffold00140 211595 1 . G scaffold24050 ScafM SNP 0037.scaffold00140 212066 1 G A scaffold24050 ScafM SNP 0037.scaffold00140 212346 1 A C scaffold24050 ScafM SNP 0037.scaffold00140 212374 1 A G scaffold24050 ScafM SNP 0037.scaffold00140 212454 1 C G scaffold24050 ScafM SNP 0037.scaffold00140 212519 1 G T scaffold24050 ScafM SNP 0037.scaffold00140 215091 1 G A scaffold52626 ScafM SNP 0037.scaffold00140 216046 1 A G scaffold52626 ScafM INDEL 0037.scaffold00140 218905 3 CTT ... scaffold31153 ScafM SNP 0037.scaffold00140 218948 1 G A scaffold31153 ScafM SNP 0037.scaffold00140 218976 1 A G scaffold31153 ScafM SNP 0037.scaffold00140 219316 1 C A scaffold31153 ScafM SNP 0037.scaffold00140 219435 1 A G scaffold31153 ScafM SNP 0037.scaffold00140 219614 1 G A scaffold31153 ScafM SNP 0037.scaffold00140 219644 1 A G scaffold31153 ScafM SNP 0037.scaffold00140 219812 1 T A scaffold31153 ScafM SNP 0037.scaffold00140 219831 1 C A scaffold31153 ScafM SNP 0037.scaffold00140 219837 1 A C scaffold31153 ScafM SNP 0037.scaffold00140 220013 1 C A scaffold31153 ScafM SNP 0037.scaffold00140 220681 1 A T scaffold31153 ScafM SNP 0037.scaffold00140 220727 1 A C scaffold31153 ScafM SNP 0037.scaffold00140 220763 1 A G scaffold31153 ScafM SNP 0037.scaffold00140 221848 1 A G scaffold2915 ScafM SNP 0037.scaffold00140 222023 1 T A scaffold2915 ScafM SNP 0037.scaffold00140 222311 1 G A scaffold2915 ScafM SNP 0037.scaffold00140 222842 1 A T scaffold2915 ScafM SNP 0037.scaffold00140 223379 1 C A scaffold2915 ReadM SNP 0037.scaffold00140 223694 1 C T - ScafM INDEL 0037.scaffold00140 224424 36 .................................... TTGGAATAGAATTCATGTTTGATAGAAATATTAGAT scaffold2915 ScafM INDEL 0037.scaffold00140 224519 40 TCTATAGTATTCTTACCCTGGTGGATCTCTCTATCATTTC ........................................ scaffold2915 ScafM SNP 0037.scaffold00140 224567 1 C A scaffold2915 ScafM SNP 0037.scaffold00140 226161 1 G A scaffold2915 ScafM SNP 0037.scaffold00140 226248 1 C T scaffold2915 ScafM SNP 0037.scaffold00140 226280 1 C T scaffold2915 ScafM SNP 0037.scaffold00140 226613 1 G A scaffold2915 ScafM SNP 0037.scaffold00140 247673 1 T G scaffold55537 ScafM SNP 0037.scaffold00140 249052 1 G A scaffold50845 ScafM SNP 0037.scaffold00140 249938 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 250011 1 C T scaffold8434 ScafM INDEL 0037.scaffold00140 250064 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 250125 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 250136 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 250158 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 250209 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 250219 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 250313 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 250329 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 250334 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 250341 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 250362 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 250376 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 250382 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 250415 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 250420 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 250491 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 250591 1 A G scaffold8434 ScafM INDEL 0037.scaffold00140 250637 2 .. TC scaffold8434 ScafM SNP 0037.scaffold00140 250659 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 250667 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 250689 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 250707 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 250972 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 250977 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 251072 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 251078 1 . C scaffold8434 ScafM SNP 0037.scaffold00140 251111 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 251170 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 251250 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 251269 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 251297 10 AGCTCATGTG .......... scaffold8434 ScafM INDEL 0037.scaffold00140 251308 7 ATCCCTA ....... scaffold8434 ScafM INDEL 0037.scaffold00140 251317 4 TTTG .... scaffold8434 ScafM INDEL 0037.scaffold00140 251322 2 CG .. scaffold8434 ScafM SNP 0037.scaffold00140 251442 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 251453 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 251465 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 251469 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 251498 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 251503 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 251544 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 251556 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 251571 3 ATT ... scaffold8434 ScafM INDEL 0037.scaffold00140 251576 1 G . scaffold8434 ScafM INDEL 0037.scaffold00140 251580 4 ACAG .... scaffold8434 ScafM INDEL 0037.scaffold00140 251651 1 G . scaffold8434 ScafM SNP 0037.scaffold00140 251659 1 A C scaffold8434 ScafM SNP 0037.scaffold00140 251740 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 251827 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 251840 1 G A scaffold8434 ScafM INDEL 0037.scaffold00140 251876 1 . T scaffold8434 ScafM INDEL 0037.scaffold00140 251886 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 251917 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 251920 1 . T scaffold8434 ScafM SNP 0037.scaffold00140 251930 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 251948 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 252015 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 252026 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252049 1 G A scaffold8434 ScafM INDEL 0037.scaffold00140 252171 1 A . scaffold8434 ScafM SNP 0037.scaffold00140 252194 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 252204 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252218 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 252240 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 252264 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 252266 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 252336 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 252344 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 252348 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 252361 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 252398 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 252428 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252443 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 252450 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 252462 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252469 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 252503 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 252715 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 252739 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252755 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 252868 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 252902 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 252948 1 A C scaffold8434 ScafM SNP 0037.scaffold00140 252967 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 252988 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 253172 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 253296 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 253312 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 253378 2 TC AT scaffold8434 ScafM SNP 0037.scaffold00140 253424 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 253437 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 253530 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 253546 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 253552 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 253619 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 253653 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 253672 1 C A scaffold8434 ScafM INDEL 0037.scaffold00140 253696 1 . A scaffold8434 ScafM SNP 0037.scaffold00140 253698 1 C A scaffold8434 ScafM INDEL 0037.scaffold00140 253699 3 ... GAG scaffold8434 ScafM SNP 0037.scaffold00140 253700 3 CCC GGT scaffold8434 ScafM INDEL 0037.scaffold00140 253704 1 . T scaffold8434 ScafM SNP 0037.scaffold00140 253706 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 253707 6 ...... CTCCCC scaffold8434 ScafM SNP 0037.scaffold00140 253708 1 A T scaffold8434 ScafM INDEL 0037.scaffold00140 253710 1 . A scaffold8434 ScafM SNP 0037.scaffold00140 253735 1 T G scaffold8434 ScafM INDEL 0037.scaffold00140 253824 1 . T scaffold8434 ScafM SNP 0037.scaffold00140 253938 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254055 2 TC AT scaffold8434 ScafM SNP 0037.scaffold00140 254068 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254079 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 254114 1 G A scaffold8434 ScafM INDEL 0037.scaffold00140 254179 2 GT .A scaffold8434 ScafM SNP 0037.scaffold00140 254185 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254197 1 G T scaffold8434 ScafM INDEL 0037.scaffold00140 254198 1 . T scaffold8434 ScafM SNP 0037.scaffold00140 254221 1 C G scaffold8434 ScafM INDEL 0037.scaffold00140 254222 2 .. TT scaffold8434 ScafM SNP 0037.scaffold00140 254263 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 254266 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 254272 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 254332 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 254361 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 254407 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 254445 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 254454 1 A C scaffold8434 ScafM SNP 0037.scaffold00140 254540 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 254552 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 254573 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 254595 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 254642 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 254680 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254684 2 AC GT scaffold8434 ScafM SNP 0037.scaffold00140 254756 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 254783 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 254849 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 254852 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 254881 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254900 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 254935 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 254969 1 G . scaffold8434 ScafM SNP 0037.scaffold00140 254985 1 A C scaffold8434 ScafM SNP 0037.scaffold00140 255024 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 255029 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 255063 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 255069 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 255102 2 TT AA scaffold8434 ScafM INDEL 0037.scaffold00140 255111 2 .. TT scaffold8434 ScafM SNP 0037.scaffold00140 255125 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 255156 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 255175 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 255202 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 255253 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 255328 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 255359 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 255394 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 255406 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 255421 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 255442 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 255546 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 255560 1 C T scaffold8434 ScafM INDEL 0037.scaffold00140 255597 2 .. GT scaffold8434 ScafM INDEL 0037.scaffold00140 255603 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 255605 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 255650 2 CG TT scaffold8434 ScafM SNP 0037.scaffold00140 255658 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 255746 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 255764 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 255791 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 255820 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 255851 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 255877 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 255901 1 T C scaffold8434 ScafM INDEL 0037.scaffold00140 256042 1 A . scaffold8434 ScafM INDEL 0037.scaffold00140 256059 3 GAA ... scaffold8434 ScafM INDEL 0037.scaffold00140 256063 3 GCT ... scaffold8434 ScafM SNP 0037.scaffold00140 256074 1 G C scaffold8434 ScafM INDEL 0037.scaffold00140 256148 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 256316 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 256368 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 256380 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 256446 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 256575 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 256601 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 256613 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 256618 1 T G scaffold8434 ScafM SNP 0037.scaffold00140 256622 1 G A scaffold8434 ScafM INDEL 0037.scaffold00140 256674 7 AGTTTGA ....... scaffold8434 ScafM SNP 0037.scaffold00140 256724 1 G T scaffold8434 ScafM INDEL 0037.scaffold00140 256729 14 AAAGGATCCCATAG .............. scaffold8434 ScafM INDEL 0037.scaffold00140 256744 1 C . scaffold8434 ScafM INDEL 0037.scaffold00140 256746 4 CATA .... scaffold8434 ScafM INDEL 0037.scaffold00140 256754 1 G . scaffold8434 ScafM SNP 0037.scaffold00140 256776 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 256815 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 256838 1 T A scaffold8434 ScafM INDEL 0037.scaffold00140 256841 2 .. AC scaffold8434 ScafM SNP 0037.scaffold00140 256880 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 256937 1 T A scaffold8434 ScafM SNP 0037.scaffold00140 256972 1 G C scaffold8434 ScafM INDEL 0037.scaffold00140 257005 1 T . scaffold8434 ScafM SNP 0037.scaffold00140 257019 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 257073 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 257106 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 257133 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 257176 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 257188 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 257197 1 A G scaffold8434 ScafM INDEL 0037.scaffold00140 257270 1 G . scaffold8434 ScafM SNP 0037.scaffold00140 257296 1 G C scaffold8434 ScafM SNP 0037.scaffold00140 257299 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 257304 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 257348 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 257350 1 C T scaffold8434 ScafM INDEL 0037.scaffold00140 257352 1 . G scaffold8434 ScafM INDEL 0037.scaffold00140 257357 4 AAGC .TTT scaffold8434 ScafM SNP 0037.scaffold00140 257364 1 C G scaffold8434 ScafM SNP 0037.scaffold00140 257369 2 CT AA scaffold8434 ScafM SNP 0037.scaffold00140 257398 1 G T scaffold8434 ScafM SNP 0037.scaffold00140 257431 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 257459 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 257474 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 257515 1 A T scaffold8434 ScafM SNP 0037.scaffold00140 257567 1 A G scaffold8434 ScafM SNP 0037.scaffold00140 257589 1 T C scaffold8434 ScafM SNP 0037.scaffold00140 257591 1 C T scaffold8434 ScafM SNP 0037.scaffold00140 257600 1 C A scaffold8434 ScafM SNP 0037.scaffold00140 257730 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 257733 1 G A scaffold8434 ScafM SNP 0037.scaffold00140 266232 1 A T scaffold7016 ScafM SNP 0037.scaffold00140 266945 1 T A scaffold7016 ScafM SNP 0037.scaffold00140 266987 1 G T scaffold7016 ScafM SNP 0037.scaffold00140 267502 1 A G scaffold7016 ScafM INDEL 0037.scaffold00140 267505 4 CTTA .... scaffold7016 ScafM INDEL 0037.scaffold00140 267927 2 AG .. scaffold7016 ScafM INDEL 0037.scaffold00140 267932 7 CTCCGGA ....... scaffold7016 ScafM INDEL 0037.scaffold00140 267940 1 C . scaffold7016 ScafM SNP 0037.scaffold00140 267942 1 C T scaffold7016 ScafM INDEL 0037.scaffold00140 267947 2 AC .. scaffold7016 ScafM INDEL 0037.scaffold00140 267951 2 GC .. scaffold7016 ScafM INDEL 0037.scaffold00140 267954 1 A . scaffold7016 ScafM INDEL 0037.scaffold00140 267957 3 GAA ..T scaffold7016 ScafM SNP 0037.scaffold00140 267964 1 A G scaffold7016 ScafM SNP 0037.scaffold00140 267967 1 C A scaffold7016 ScafM SNP 0037.scaffold00140 267975 3 CAA AGC scaffold7016 ScafM SNP 0037.scaffold00140 267981 3 AAT TCC scaffold7016 ScafM SNP 0037.scaffold00140 267985 1 A G scaffold7016 ScafM INDEL 0037.scaffold00140 267991 1 G . scaffold7016 ScafM SNP 0037.scaffold00140 267993 1 A C scaffold7016 ScafM INDEL 0037.scaffold00140 268097 19 ................... GCCCACCTTTTCTGGGCCC scaffold7016 ScafM SNP 0037.scaffold00140 270352 1 A T scaffold7016 ScafM SNP 0037.scaffold00140 270389 1 T C scaffold7016 ScafM SNP 0037.scaffold00140 275529 1 T C scaffold7016 ScafM SNP 0037.scaffold00140 275607 1 C G scaffold7016 ScafM SNP 0037.scaffold00140 282729 1 C T scaffold7016 ScafM SNP 0037.scaffold00140 311523 1 G A scaffold35244 ScafM SNP 0037.scaffold00140 341073 1 T G scaffold6749 ScafM SNP 0037.scaffold00140 346133 1 C T scaffold21494 ScafM INDEL 0037.scaffold00140 346208 1 T . scaffold21494 ScafM SNP 0037.scaffold00140 346210 1 T G scaffold21494 ScafM SNP 0037.scaffold00140 346221 1 T G scaffold21494 ScafM SNP 0037.scaffold00140 346240 1 G A scaffold21494 ScafM SNP 0037.scaffold00140 346250 1 G T scaffold21494 ScafM SNP 0037.scaffold00140 346258 1 T C scaffold21494 ScafM INDEL 0037.scaffold00140 346274 1 T . scaffold21494 ScafM SNP 0037.scaffold00140 346280 1 T C scaffold21494 ScafM INDEL 0037.scaffold00140 346285 1 C . scaffold21494 ScafM SNP 0037.scaffold00140 346294 1 T A scaffold21494 ScafM SNP 0037.scaffold00140 346298 1 G T scaffold21494 ScafM SNP 0037.scaffold00140 346301 1 A T scaffold21494 ScafM INDEL 0037.scaffold00140 346317 1 . T scaffold21494 ScafM SNP 0037.scaffold00140 348062 1 T A scaffold16559 ScafM SNP 0037.scaffold00140 348103 1 G A scaffold16559 ScafM INDEL 0037.scaffold00140 348164 9 CGGTGCTTG ......... scaffold16559 ScafM INDEL 0037.scaffold00140 348174 1 G . scaffold16559 ScafM INDEL 0037.scaffold00140 348178 1 G . scaffold16559 ScafM INDEL 0037.scaffold00140 348181 10 TTTTGGTGGT .........C scaffold16559 ScafM SNP 0037.scaffold00140 348194 1 G A scaffold16559 ScafM SNP 0037.scaffold00140 348219 1 T C scaffold16559 ScafM SNP 0037.scaffold00140 348223 1 A G scaffold16559 ScafM SNP 0037.scaffold00140 348311 1 G C scaffold16559 ScafM SNP 0037.scaffold00140 348319 1 T A scaffold16559 ScafM SNP 0037.scaffold00140 348349 1 T C scaffold16559 ScafM INDEL 0037.scaffold00140 348364 1 C . scaffold16559 ScafM SNP 0037.scaffold00140 348480 1 C T scaffold16559 ScafM INDEL 0037.scaffold00140 348502 1 A . scaffold16559 ScafM SNP 0037.scaffold00140 348524 1 C G scaffold16559 ScafM INDEL 0037.scaffold00140 348566 2 GG .A scaffold16559 ScafM SNP 0037.scaffold00140 348637 1 A C scaffold16559 ScafM SNP 0037.scaffold00140 349339 1 A G scaffold16559 ScafM SNP 0037.scaffold00140 349407 1 C G scaffold16559 ReadM SNP 0037.scaffold00140 349676 1 G A - ScafM INDEL 0037.scaffold00140 353678 2 TG .. scaffold8862 ScafM INDEL 0037.scaffold00140 353766 31 GAGGGTTTCATATACTCTAAGCTTTAGTTTC ............................... scaffold8862 ScafM INDEL 0037.scaffold00140 353986 2 .. AC scaffold8862 ScafM SNP 0037.scaffold00140 354049 2 GT AC scaffold8862 ScafM INDEL 0037.scaffold00140 354143 6 AAAAAA .....T scaffold8862 ScafM SNP 0037.scaffold00140 354228 1 C A scaffold8862 ScafM SNP 0037.scaffold00140 354617 1 T C scaffold8862 ScafM SNP 0037.scaffold00140 354698 1 T C scaffold8862 ScafM SNP 0037.scaffold00140 357075 1 T C scaffold19815 ScafM SNP 0037.scaffold00140 357209 1 G A scaffold19815 ScafM SNP 0037.scaffold00140 357221 1 C T scaffold19815 ScafM SNP 0037.scaffold00140 357281 1 A C scaffold19815 ScafM INDEL 0037.scaffold00140 357372 1 . T scaffold19815 ScafM SNP 0037.scaffold00140 360375 1 C T C19692005 ScafM SNP 0037.scaffold00140 360541 1 T A C19692005 ScafM INDEL 0037.scaffold00140 360557 1 T . C19692005 ScafM SNP 0037.scaffold00140 360615 1 A T C19692005 ScafM SNP 0037.scaffold00140 360669 1 A C C19692005 ScafM SNP 0037.scaffold00140 360682 1 C A C19692005 ScafM SNP 0037.scaffold00140 360954 1 T G C19692005 ScafM SNP 0037.scaffold00140 361112 1 A C C19692005 ScafM SNP 0037.scaffold00140 364613 1 T C scaffold18394 ScafM SNP 0037.scaffold00140 364933 1 A C scaffold18394 ScafM INDEL 0037.scaffold00140 365107 14 .............. GAGACGTGCACTAG scaffold18394 ScafM INDEL 0037.scaffold00140 365109 5 ..... GCACG scaffold18394 ScafM INDEL 0037.scaffold00140 365110 1 . G scaffold18394 ScafM SNP 0037.scaffold00140 365163 1 C A scaffold18394 ScafM SNP 0037.scaffold00140 365197 1 C A scaffold18394 ScafM SNP 0037.scaffold00140 370162 1 C T scaffold18394 ScafM SNP 0037.scaffold00140 370207 1 T A scaffold18394 ScafM SNP 0037.scaffold00140 372624 1 C T scaffold18394 ScafM SNP 0037.scaffold00140 373601 1 G C scaffold18394 ScafM SNP 0037.scaffold00140 373671 1 T C scaffold18394 ScafM SNP 0037.scaffold00140 373776 1 T C scaffold18394 ScafM SNP 0037.scaffold00140 373791 1 A G scaffold18394 ScafM INDEL 0037.scaffold00140 373833 1 T . scaffold18394 ScafM SNP 0037.scaffold00140 374235 1 C T scaffold18394 ScafM SNP 0037.scaffold00140 374254 1 G A scaffold18394 ScafM SNP 0037.scaffold00140 374305 1 A T scaffold18394 ScafM SNP 0037.scaffold00140 374383 1 T C scaffold18394 ScafM SNP 0037.scaffold00140 374661 1 T A scaffold18394 ScafM INDEL 0037.scaffold00140 374665 2 TT .. scaffold18394 ScafM SNP 0037.scaffold00140 380937 1 A G scaffold35865 ScafM SNP 0037.scaffold00140 380942 1 T G scaffold35865 ScafM SNP 0037.scaffold00140 380944 1 T C scaffold35865 ScafM INDEL 0037.scaffold00140 380959 1 . T scaffold35865 ScafM SNP 0037.scaffold00140 381017 1 T C scaffold35865 ScafM INDEL 0037.scaffold00140 381037 9 ......... CTTCTACAT scaffold35865 ScafM SNP 0037.scaffold00140 381049 1 G A scaffold35865 ScafM SNP 0037.scaffold00140 381081 1 T C scaffold35865 ScafM SNP 0037.scaffold00140 381089 1 T C scaffold35865 ScafM SNP 0037.scaffold00140 381097 1 T C scaffold35865 ScafM SNP 0037.scaffold00140 381129 1 C T scaffold35865 ScafM SNP 0037.scaffold00140 381198 1 A G scaffold35865 ScafM SNP 0037.scaffold00140 381314 5 TTTTT AAAAA scaffold35865 ScafM SNP 0037.scaffold00140 381353 1 T C scaffold35865 ScafM SNP 0037.scaffold00140 381362 1 A G scaffold35865 ScafM INDEL 0037.scaffold00140 385634 23 ....................... GTGTTGGGACGAATCAAGAGGAA scaffold3588 ScafM SNP 0037.scaffold00140 385678 1 A G scaffold3588 ScafM SNP 0037.scaffold00140 385752 1 T C scaffold3588 ScafM SNP 0037.scaffold00140 385768 1 C A scaffold3588 ScafM SNP 0037.scaffold00140 385775 1 C A scaffold3588 ScafM SNP 0037.scaffold00140 385808 1 A C scaffold3588 ScafM SNP 0037.scaffold00140 385814 1 G C scaffold3588 ScafM SNP 0037.scaffold00140 385851 1 G A scaffold3588 ScafM SNP 0037.scaffold00140 385893 1 C G scaffold3588 ScafM SNP 0037.scaffold00140 385896 1 C T scaffold3588 ScafM SNP 0037.scaffold00140 385937 1 G A scaffold3588 ScafM SNP 0037.scaffold00140 385942 1 A T scaffold3588 ScafM SNP 0037.scaffold00140 385945 1 C A scaffold3588 ScafM SNP 0037.scaffold00140 385950 1 T C scaffold3588 ScafM SNP 0037.scaffold00140 385953 1 C T scaffold3588 ScafM SNP 0037.scaffold00140 385956 1 G A scaffold3588 ScafM SNP 0037.scaffold00140 386218 1 A G scaffold26611 ScafM SNP 0037.scaffold00140 401202 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 401272 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 401295 1 G A scaffold9630 ScafM INDEL 0037.scaffold00140 401742 1 A . scaffold9630 ScafM SNP 0037.scaffold00140 405116 1 T G scaffold22805 ScafM SNP 0037.scaffold00140 405187 1 T C scaffold22805 ScafM SNP 0037.scaffold00140 405230 1 A T scaffold22805 ScafM SNP 0037.scaffold00140 405242 1 T C scaffold22805 ScafM SNP 0037.scaffold00140 405796 1 G C scaffold9630 ScafM SNP 0037.scaffold00140 405809 1 G C scaffold9630 ScafM SNP 0037.scaffold00140 406109 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 406135 1 G C scaffold9630 ScafM SNP 0037.scaffold00140 406228 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 406231 2 GG CA scaffold9630 ScafM INDEL 0037.scaffold00140 406304 10 .......... TGTGGGACCC scaffold9630 ScafM SNP 0037.scaffold00140 406390 1 C G scaffold9630 ScafM SNP 0037.scaffold00140 406436 1 G C scaffold9630 ScafM SNP 0037.scaffold00140 406454 1 G A scaffold9630 ScafM INDEL 0037.scaffold00140 406463 1 G . scaffold9630 ScafM SNP 0037.scaffold00140 406468 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 406511 1 C A scaffold9630 ScafM SNP 0037.scaffold00140 406522 1 T G scaffold9630 ScafM INDEL 0037.scaffold00140 406596 7 ....... ACTCATG scaffold9630 ScafM SNP 0037.scaffold00140 406613 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 406619 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 406622 1 C A scaffold9630 ScafM SNP 0037.scaffold00140 406655 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 406712 1 T G scaffold9630 ScafM INDEL 0037.scaffold00140 406714 2 .. GT scaffold9630 ScafM INDEL 0037.scaffold00140 406797 1 . T scaffold9630 ScafM SNP 0037.scaffold00140 406940 1 A T scaffold9630 ScafM SNP 0037.scaffold00140 406966 1 G T scaffold9630 ScafM SNP 0037.scaffold00140 407012 1 G T scaffold9630 ScafM SNP 0037.scaffold00140 407090 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 407106 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 407150 1 T G scaffold9630 ScafM INDEL 0037.scaffold00140 407160 1 . T scaffold9630 ScafM SNP 0037.scaffold00140 407215 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 407244 1 A T scaffold9630 ScafM SNP 0037.scaffold00140 407306 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 407360 1 A T scaffold9630 ScafM SNP 0037.scaffold00140 407369 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 407443 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 407470 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 407580 1 G A scaffold9630 ScafM INDEL 0037.scaffold00140 407641 1 . T scaffold9630 ScafM SNP 0037.scaffold00140 407643 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 407696 1 A T scaffold9630 ScafM INDEL 0037.scaffold00140 407777 2 .. GA scaffold9630 ScafM SNP 0037.scaffold00140 407867 1 C T scaffold9630 ScafM INDEL 0037.scaffold00140 407899 1 T . scaffold9630 ScafM SNP 0037.scaffold00140 407977 1 C G scaffold9630 ScafM SNP 0037.scaffold00140 408014 1 G T scaffold9630 ScafM INDEL 0037.scaffold00140 408028 2 TT .. scaffold9630 ScafM SNP 0037.scaffold00140 408033 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408038 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408089 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 408123 1 G T scaffold9630 ScafM SNP 0037.scaffold00140 408190 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408196 1 T A scaffold9630 ScafM SNP 0037.scaffold00140 408198 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 408240 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408290 1 G T scaffold9630 ScafM SNP 0037.scaffold00140 408292 1 A T scaffold9630 ScafM SNP 0037.scaffold00140 408298 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 408323 1 A C scaffold9630 ScafM INDEL 0037.scaffold00140 408376 2 TG .. scaffold9630 ScafM SNP 0037.scaffold00140 408379 1 T A scaffold9630 ScafM SNP 0037.scaffold00140 408409 1 T G scaffold9630 ScafM SNP 0037.scaffold00140 408434 1 A C scaffold9630 ScafM SNP 0037.scaffold00140 408455 1 C G scaffold9630 ScafM SNP 0037.scaffold00140 408468 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408521 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 408572 1 C G scaffold9630 ScafM SNP 0037.scaffold00140 408604 1 T A scaffold9630 ScafM SNP 0037.scaffold00140 408625 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 408667 1 A G scaffold9630 ScafM INDEL 0037.scaffold00140 408675 6 ...... CGGACC scaffold9630 ScafM INDEL 0037.scaffold00140 408676 4 .... CAAA scaffold9630 ScafM INDEL 0037.scaffold00140 408677 2 .. GA scaffold9630 ScafM SNP 0037.scaffold00140 408678 1 T G scaffold9630 ScafM SNP 0037.scaffold00140 408680 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408703 1 T G scaffold9630 ScafM SNP 0037.scaffold00140 408708 1 G T scaffold9630 ScafM SNP 0037.scaffold00140 408732 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408740 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 408764 1 G C scaffold9630 ScafM SNP 0037.scaffold00140 408779 1 G A scaffold9630 ScafM SNP 0037.scaffold00140 408814 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 408831 1 T C scaffold9630 ScafM SNP 0037.scaffold00140 408853 1 G T scaffold9630 ScafM INDEL 0037.scaffold00140 408919 3 ... TTC scaffold9630 ScafM SNP 0037.scaffold00140 408922 1 C T scaffold9630 ScafM SNP 0037.scaffold00140 408964 1 A G scaffold9630 ScafM SNP 0037.scaffold00140 408995 2 CA AT scaffold9630 ScafM INDEL 0037.scaffold00140 410438 22 ...................... GAATGAAGCAAACCTCTTTAAT scaffold68983 ScafM SNP 0037.scaffold00140 410520 1 G A scaffold68983 ScafM SNP 0037.scaffold00140 410538 1 G A scaffold68983 ScafM SNP 0037.scaffold00140 411241 1 T C scaffold68983 ScafM SNP 0037.scaffold00140 412512 1 G T scaffold29772 ScafM INDEL 0037.scaffold00140 412545 4 TTTT .... scaffold29772 ScafM SNP 0037.scaffold00140 412571 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 412588 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 412661 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 412720 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 412751 1 T G scaffold29772 ScafM INDEL 0037.scaffold00140 412785 1 . T scaffold29772 ScafM SNP 0037.scaffold00140 412813 1 C A scaffold29772 ScafM SNP 0037.scaffold00140 412819 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 412880 1 G T scaffold29772 ScafM SNP 0037.scaffold00140 413007 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 413019 1 A C scaffold29772 ScafM SNP 0037.scaffold00140 413048 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 413182 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 413299 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 413312 1 G T scaffold29772 ScafM INDEL 0037.scaffold00140 413314 3 CCA ... scaffold29772 ScafM SNP 0037.scaffold00140 413318 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 413321 2 TT AC scaffold29772 ScafM SNP 0037.scaffold00140 413349 1 G A scaffold29772 ScafM INDEL 0037.scaffold00140 413359 1 A . scaffold29772 ScafM SNP 0037.scaffold00140 413386 1 G T scaffold29772 ScafM SNP 0037.scaffold00140 413425 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 413504 2 TT GC scaffold29772 ScafM SNP 0037.scaffold00140 413591 1 T A scaffold29772 ScafM INDEL 0037.scaffold00140 413593 8 ........ CGCAAAGG scaffold29772 ScafM SNP 0037.scaffold00140 413613 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 413627 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 413635 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 413648 1 T G scaffold29772 ScafM SNP 0037.scaffold00140 413661 1 G C scaffold29772 ScafM SNP 0037.scaffold00140 413671 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 413732 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 413772 1 A G scaffold29772 ScafM SNP 0037.scaffold00140 413797 2 TT AA scaffold29772 ScafM SNP 0037.scaffold00140 413860 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 413995 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 414056 1 C G scaffold29772 ScafM SNP 0037.scaffold00140 414077 1 T A scaffold29772 ScafM INDEL 0037.scaffold00140 414120 1 . A scaffold29772 ScafM SNP 0037.scaffold00140 414129 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 414207 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 417607 1 C A scaffold48183 ScafM INDEL 0037.scaffold00140 419157 7 ....... ATTTACT scaffold29772 ScafM SNP 0037.scaffold00140 419204 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 419244 1 C T scaffold29772 ScafM INDEL 0037.scaffold00140 419247 1 . T scaffold29772 ScafM SNP 0037.scaffold00140 419250 1 C T scaffold29772 ScafM INDEL 0037.scaffold00140 419260 2 CA .. scaffold29772 ScafM INDEL 0037.scaffold00140 419286 1 . G scaffold29772 ScafM SNP 0037.scaffold00140 419304 1 T C scaffold29772 ScafM INDEL 0037.scaffold00140 419313 1 . T scaffold29772 ScafM SNP 0037.scaffold00140 419470 1 G T scaffold29772 ScafM SNP 0037.scaffold00140 419525 2 AA GT scaffold29772 ScafM SNP 0037.scaffold00140 419546 2 GG TA scaffold29772 ScafM SNP 0037.scaffold00140 419567 1 A G scaffold29772 ScafM SNP 0037.scaffold00140 419580 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 419582 1 A C scaffold29772 ScafM SNP 0037.scaffold00140 419611 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 419614 1 T G scaffold29772 ScafM SNP 0037.scaffold00140 419618 1 C A scaffold29772 ScafM SNP 0037.scaffold00140 420426 1 C A scaffold48183 ScafM SNP 0037.scaffold00140 421010 2 GT AC scaffold48183 ScafM SNP 0037.scaffold00140 421624 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 421668 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 421706 1 G T scaffold29772 ScafM SNP 0037.scaffold00140 421744 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 421785 1 G C scaffold29772 ScafM SNP 0037.scaffold00140 421795 1 G T scaffold29772 ScafM SNP 0037.scaffold00140 421829 1 G A scaffold29772 ScafM INDEL 0037.scaffold00140 421868 1 T . scaffold29772 ScafM INDEL 0037.scaffold00140 421880 1 G . scaffold29772 ScafM SNP 0037.scaffold00140 421943 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 421955 1 C A scaffold29772 ScafM SNP 0037.scaffold00140 422027 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 422039 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 422090 1 G A scaffold29772 ScafM INDEL 0037.scaffold00140 422124 1 . A scaffold29772 ScafM SNP 0037.scaffold00140 422136 1 C A scaffold29772 ScafM INDEL 0037.scaffold00140 422182 36 .................................... CATTCCTAGCACACCAAACATGGTACACAACAGCAG scaffold29772 ScafM SNP 0037.scaffold00140 422263 1 A T scaffold29772 ScafM SNP 0037.scaffold00140 422305 1 C A scaffold29772 ScafM SNP 0037.scaffold00140 424492 1 A G scaffold29772 ScafM SNP 0037.scaffold00140 424496 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 425845 1 T C scaffold48183 ScafM SNP 0037.scaffold00140 426547 1 A C scaffold48183 ScafM SNP 0037.scaffold00140 426596 1 T G scaffold48183 ScafM SNP 0037.scaffold00140 426663 1 A G scaffold48183 ScafM SNP 0037.scaffold00140 426670 1 T A scaffold48183 ScafM SNP 0037.scaffold00140 426672 1 A C scaffold48183 ScafM SNP 0037.scaffold00140 426696 1 G A scaffold48183 ScafM SNP 0037.scaffold00140 426701 1 C T scaffold48183 ScafM SNP 0037.scaffold00140 427073 1 G T scaffold48183 ScafM SNP 0037.scaffold00140 427112 1 G C scaffold48183 ScafM SNP 0037.scaffold00140 427139 1 G C scaffold48183 ScafM INDEL 0037.scaffold00140 427162 3 GAC ... scaffold48183 ScafM SNP 0037.scaffold00140 427184 1 C T scaffold48183 ScafM SNP 0037.scaffold00140 427226 1 G A scaffold48183 ScafM SNP 0037.scaffold00140 427551 1 T C scaffold48183 ScafM SNP 0037.scaffold00140 427680 1 G A scaffold48183 ScafM SNP 0037.scaffold00140 427714 1 T C scaffold48183 ScafM SNP 0037.scaffold00140 427787 1 A T scaffold48183 ScafM SNP 0037.scaffold00140 427816 1 G T scaffold48183 ScafM INDEL 0037.scaffold00140 427832 1 T . scaffold48183 ScafM SNP 0037.scaffold00140 427835 1 T G scaffold48183 ScafM SNP 0037.scaffold00140 428194 1 T C scaffold48183 ScafM SNP 0037.scaffold00140 428201 1 T G scaffold48183 ScafM SNP 0037.scaffold00140 428223 1 A G scaffold48183 ScafM SNP 0037.scaffold00140 428231 1 C T scaffold48183 ScafM SNP 0037.scaffold00140 428285 1 T G scaffold48183 ScafM SNP 0037.scaffold00140 428292 1 A G scaffold48183 ScafM SNP 0037.scaffold00140 428347 1 G A scaffold48183 ScafM SNP 0037.scaffold00140 428354 1 T C scaffold48183 ScafM SNP 0037.scaffold00140 429787 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 430049 1 A C scaffold29772 ScafM INDEL 0037.scaffold00140 430087 2 AA .. scaffold29772 ScafM SNP 0037.scaffold00140 430097 1 A C scaffold29772 ScafM SNP 0037.scaffold00140 430114 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 430148 1 G A scaffold29772 ScafM INDEL 0037.scaffold00140 430149 2 .T AC scaffold29772 ScafM SNP 0037.scaffold00140 430171 1 T G scaffold29772 ScafM SNP 0037.scaffold00140 430173 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 430218 1 G T scaffold29772 ScafM INDEL 0037.scaffold00140 430254 1 A . scaffold29772 ScafM SNP 0037.scaffold00140 430259 1 A T scaffold29772 ScafM SNP 0037.scaffold00140 430276 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 430285 2 CA TG scaffold29772 ScafM SNP 0037.scaffold00140 430327 1 G C scaffold29772 ScafM SNP 0037.scaffold00140 430329 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 430375 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 430384 1 C A scaffold29772 ScafM INDEL 0037.scaffold00140 430427 8 ........ CTCACCCA scaffold29772 ScafM SNP 0037.scaffold00140 430475 1 T G scaffold29772 ScafM SNP 0037.scaffold00140 430478 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 430491 1 T C scaffold29772 ScafM INDEL 0037.scaffold00140 430681 1 . C scaffold29772 ScafM SNP 0037.scaffold00140 430741 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 430774 1 T A scaffold29772 ScafM SNP 0037.scaffold00140 430782 1 T C scaffold29772 ScafM SNP 0037.scaffold00140 430811 1 G A scaffold29772 ScafM SNP 0037.scaffold00140 431004 1 G C scaffold29772 ScafM SNP 0037.scaffold00140 431025 1 C T scaffold29772 ScafM SNP 0037.scaffold00140 431036 1 T A scaffold29772 ScafM INDEL 0037.scaffold00140 431046 1 . T scaffold29772 ScafM SNP 0037.scaffold00140 431363 1 T A scaffold43293 ScafM INDEL 0037.scaffold00140 431369 1 . T scaffold43293 ScafM INDEL 0037.scaffold00140 431378 1 . A scaffold43293 ScafM SNP 0037.scaffold00140 431384 1 A C scaffold43293 ScafM INDEL 0037.scaffold00140 431429 3 ... GAG scaffold43293 ScafM INDEL 0037.scaffold00140 431430 1 . G scaffold43293 ScafM SNP 0037.scaffold00140 431482 1 G A scaffold43293 ScafM SNP 0037.scaffold00140 431484 1 C A scaffold43293 ScafM SNP 0037.scaffold00140 431944 1 A T scaffold43293 ScafM SNP 0037.scaffold00140 432261 1 C T scaffold43293 ScafM SNP 0037.scaffold00140 432276 1 A C scaffold43293 ScafM SNP 0037.scaffold00140 432330 1 C A scaffold43293 ScafM SNP 0037.scaffold00140 432345 2 TT AC scaffold43293 ScafM SNP 0037.scaffold00140 432413 1 C T scaffold43293 ScafM INDEL 0037.scaffold00140 432871 6 ...... TGTTTT scaffold43293 ScafM SNP 0037.scaffold00140 432903 1 C A scaffold43293 ScafM SNP 0037.scaffold00140 434547 1 C T scaffold43293 ScafM SNP 0037.scaffold00140 437198 1 C A scaffold43293 ScafM SNP 0037.scaffold00140 437231 1 G T scaffold43293 ScafM SNP 0037.scaffold00140 437573 1 C T scaffold43293 ScafM SNP 0037.scaffold00140 437582 1 C G scaffold43293 ScafM SNP 0037.scaffold00140 437639 1 T A scaffold43293 ScafM SNP 0037.scaffold00140 437749 1 C T scaffold43293 ScafM SNP 0037.scaffold00140 438083 1 C T scaffold43293 ScafM INDEL 0037.scaffold00140 438268 16 ................ TAGAGTTATGAACGAC scaffold43293 ScafM SNP 0037.scaffold00140 438758 1 A C scaffold43293 ScafM SNP 0037.scaffold00140 438823 1 T C scaffold43293 ScafM SNP 0037.scaffold00140 438834 1 G C scaffold43293 ScafM SNP 0037.scaffold00140 438899 1 C G scaffold43293 ScafM SNP 0037.scaffold00140 438933 1 C A scaffold43293 ScafM SNP 0037.scaffold00140 439473 1 T C scaffold43293 ScafM SNP 0037.scaffold00140 439476 1 T A scaffold43293 ScafM SNP 0037.scaffold00140 439711 1 T G scaffold43293 ScafM SNP 0037.scaffold00140 440552 1 G T scaffold43293 ScafM INDEL 0037.scaffold00140 440599 1 A . scaffold43293 ScafM SNP 0037.scaffold00140 440634 1 C G scaffold43293 ScafM SNP 0037.scaffold00140 441046 1 C G scaffold52757 ScafM INDEL 0037.scaffold00140 441125 1 G . scaffold52757 ScafM INDEL 0037.scaffold00140 445157 2 AA .. scaffold27222 ScafM SNP 0037.scaffold00140 445176 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 445185 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 445221 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 445239 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 445245 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 445295 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 445310 1 T C scaffold27222 ScafM INDEL 0037.scaffold00140 445331 1 . T scaffold27222 ScafM SNP 0037.scaffold00140 445480 1 C A scaffold27222 ScafM INDEL 0037.scaffold00140 445482 2 .. AT scaffold27222 ScafM SNP 0037.scaffold00140 445500 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 445526 1 G C scaffold27222 ScafM INDEL 0037.scaffold00140 445532 8 CTCAAATC ........ scaffold27222 ScafM SNP 0037.scaffold00140 445545 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 445589 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 445663 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 445692 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 445708 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 445713 1 A T scaffold27222 ScafM INDEL 0037.scaffold00140 445719 2 .. TT scaffold27222 ScafM SNP 0037.scaffold00140 445774 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 445793 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 445813 1 C G scaffold27222 ScafM INDEL 0037.scaffold00140 445867 1 A . scaffold27222 ScafM SNP 0037.scaffold00140 445869 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 445908 1 A G scaffold27222 ScafM INDEL 0037.scaffold00140 445922 1 T . scaffold27222 ScafM SNP 0037.scaffold00140 445934 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 445958 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 445978 1 C T scaffold27222 ScafM INDEL 0037.scaffold00140 446092 10 GTCTAGGTGT .......... scaffold27222 ScafM SNP 0037.scaffold00140 446104 1 G A scaffold27222 ScafM INDEL 0037.scaffold00140 446114 1 T . scaffold27222 ScafM SNP 0037.scaffold00140 446123 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 446172 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 446174 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 446262 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 446264 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 446323 1 T G scaffold27222 ScafM INDEL 0037.scaffold00140 446374 7 ATTATTA ....... scaffold27222 ScafM SNP 0037.scaffold00140 446395 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 446413 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 446519 1 G C scaffold27222 ScafM INDEL 0037.scaffold00140 446524 1 . A scaffold27222 ScafM SNP 0037.scaffold00140 446568 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 446579 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 446621 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 446650 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 446655 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 446683 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 446708 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 446733 1 T G scaffold27222 ScafM INDEL 0037.scaffold00140 446752 8 ........ GTTAATCA scaffold27222 ScafM SNP 0037.scaffold00140 446765 1 G C scaffold27222 ScafM INDEL 0037.scaffold00140 446768 1 C . scaffold27222 ScafM SNP 0037.scaffold00140 446809 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 446861 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 446876 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 446917 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 447348 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 447357 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 447368 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 447444 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 447493 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 447519 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 447657 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 447683 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 447709 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 447733 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 447744 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 447750 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 447758 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 447788 1 A T scaffold27222 ScafM INDEL 0037.scaffold00140 447792 2 .T GG scaffold27222 ScafM INDEL 0037.scaffold00140 447798 17 ................. TAGATAATTATAATCTA scaffold27222 ScafM SNP 0037.scaffold00140 447805 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 447813 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 447885 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 447928 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 447949 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 447953 1 C T scaffold27222 ScafM INDEL 0037.scaffold00140 448004 7 GTATGAG ....... scaffold27222 ScafM SNP 0037.scaffold00140 448099 2 AT CC scaffold27222 ScafM INDEL 0037.scaffold00140 448116 11 ........... TCTTTTGGTAT scaffold27222 ScafM SNP 0037.scaffold00140 448193 1 C T scaffold27222 ScafM INDEL 0037.scaffold00140 448229 1 A . scaffold27222 ScafM SNP 0037.scaffold00140 448237 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 448255 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 448260 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 448294 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 448441 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 448488 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 448599 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 448656 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 448677 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 448707 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 448806 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 448819 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 448835 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 449092 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 449129 1 G A scaffold27222 ScafM INDEL 0037.scaffold00140 449406 1 C . scaffold27222 ScafM SNP 0037.scaffold00140 449412 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 449515 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 449551 1 A G scaffold27222 ScafM INDEL 0037.scaffold00140 449641 35 TGAACTCAATAAAACTTTTTCACATTCCAGGTAGT ................................... scaffold27222 ScafM SNP 0037.scaffold00140 449688 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 449724 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 449735 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 449749 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 449832 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 449964 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 449966 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 450030 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 450111 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 450135 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 450160 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 450168 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 450174 3 AAG CTC scaffold27222 ScafM SNP 0037.scaffold00140 450180 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 450241 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 450246 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 450324 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 450391 1 T A scaffold27222 ScafM INDEL 0037.scaffold00140 450398 1 . C scaffold27222 ScafM INDEL 0037.scaffold00140 450409 3 ... ACT scaffold27222 ScafM SNP 0037.scaffold00140 450457 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 450501 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 450526 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 450583 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 450686 1 G C scaffold27222 ScafM INDEL 0037.scaffold00140 450832 1 T . scaffold27222 ScafM SNP 0037.scaffold00140 450861 1 A G scaffold27222 ScafM INDEL 0037.scaffold00140 450868 4 GTTT .... scaffold27222 ScafM SNP 0037.scaffold00140 450951 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 450957 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 450997 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 451001 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 451006 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 451037 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 451056 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 451072 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 451096 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 451106 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 451129 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 451131 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 451139 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 451179 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 451191 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 451197 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 451227 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 451315 1 T A scaffold27222 ScafM INDEL 0037.scaffold00140 451328 1 . A scaffold27222 ScafM SNP 0037.scaffold00140 451379 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 451394 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 451417 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 451486 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 451515 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 451557 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 451573 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 451601 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 451604 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 451621 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 451637 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 451639 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 451655 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 451800 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 451811 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 451937 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 451949 1 C G scaffold27222 ScafM INDEL 0037.scaffold00140 451991 1 A . scaffold27222 ScafM SNP 0037.scaffold00140 451999 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 452014 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 452149 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 452179 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 452200 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 452298 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 452302 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 452306 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 452318 1 C G scaffold27222 ScafM INDEL 0037.scaffold00140 452348 3 CCA ... scaffold27222 ScafM SNP 0037.scaffold00140 452358 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 452374 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 452430 1 T C scaffold27222 ScafM INDEL 0037.scaffold00140 452454 1 C . scaffold27222 ScafM SNP 0037.scaffold00140 452457 1 C A scaffold27222 ScafM SNP 0037.scaffold00140 452471 2 CG TA scaffold27222 ScafM SNP 0037.scaffold00140 452501 2 TT CC scaffold27222 ScafM SNP 0037.scaffold00140 452581 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 452593 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 452602 1 G T scaffold27222 ScafM SNP 0037.scaffold00140 452663 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 452784 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 452869 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 452951 1 T G scaffold27222 ScafM SNP 0037.scaffold00140 453215 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 453249 1 G C scaffold27222 ScafM SNP 0037.scaffold00140 453266 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 453272 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 453276 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 454670 1 C T scaffold21806 ScafM SNP 0037.scaffold00140 455624 1 A T scaffold21806 ScafM SNP 0037.scaffold00140 455676 1 T C scaffold21806 ScafM SNP 0037.scaffold00140 455678 1 G C scaffold21806 ScafM SNP 0037.scaffold00140 455692 1 T A scaffold21806 ScafM SNP 0037.scaffold00140 455699 1 C A scaffold21806 ScafM SNP 0037.scaffold00140 455738 1 C G scaffold21806 ScafM INDEL 0037.scaffold00140 455801 8 ........ CAATGGAA scaffold21806 ScafM SNP 0037.scaffold00140 456782 1 G A scaffold21806 ScafM SNP 0037.scaffold00140 457062 1 T C scaffold21806 ScafM SNP 0037.scaffold00140 457180 1 A G scaffold21806 ScafM INDEL 0037.scaffold00140 458674 1 . G scaffold21806 ScafM SNP 0037.scaffold00140 458696 1 C A scaffold21806 ScafM SNP 0037.scaffold00140 458810 1 A G scaffold21806 ScafM SNP 0037.scaffold00140 462506 1 T A scaffold27222 ScafM SNP 0037.scaffold00140 462514 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 462534 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 462539 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 462623 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 462640 1 A G scaffold27222 ScafM INDEL 0037.scaffold00140 462651 8 AGAGTATT ........ scaffold27222 ScafM SNP 0037.scaffold00140 462672 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 462681 1 A G scaffold27222 ScafM SNP 0037.scaffold00140 462754 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 462789 1 C T scaffold27222 ScafM SNP 0037.scaffold00140 462798 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 462807 1 T C scaffold27222 ScafM SNP 0037.scaffold00140 462831 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 462841 1 A C scaffold27222 ScafM SNP 0037.scaffold00140 462849 1 A T scaffold27222 ScafM SNP 0037.scaffold00140 462863 1 C G scaffold27222 ScafM SNP 0037.scaffold00140 462891 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 462896 1 G A scaffold27222 ScafM SNP 0037.scaffold00140 463514 1 T A scaffold57506 ScafM INDEL 0037.scaffold00140 463564 3 ... TAG scaffold57506 ScafM SNP 0037.scaffold00140 463574 1 C G scaffold57506 ScafM SNP 0037.scaffold00140 463605 1 G A scaffold57506 ScafM SNP 0037.scaffold00140 463611 1 A T scaffold57506 ScafM SNP 0037.scaffold00140 463643 1 C T scaffold57506 ScafM SNP 0037.scaffold00140 463690 1 A C scaffold57506 ScafM SNP 0037.scaffold00140 504550 1 G C scaffold70655 ScafM SNP 0037.scaffold00140 504560 1 T C scaffold70655 ScafM SNP 0037.scaffold00140 504586 1 A G scaffold70655 ScafM SNP 0037.scaffold00140 504596 1 T C scaffold70655 ScafM INDEL 0037.scaffold00140 504604 7 TTTTTTT ....AAC scaffold70655 ScafM SNP 0037.scaffold00140 504613 2 TT GC scaffold70655 ScafM SNP 0037.scaffold00140 504667 1 G T scaffold70655 ScafM INDEL 0037.scaffold00140 504669 1 T . scaffold70655 ScafM SNP 0037.scaffold00140 504679 1 A G scaffold70655 ScafM SNP 0037.scaffold00140 504740 1 T A scaffold70655 ScafM SNP 0037.scaffold00140 505559 1 A C scaffold2707 ScafM SNP 0037.scaffold00140 505570 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 505573 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 505618 1 G A scaffold2707 ScafM SNP 0037.scaffold00140 505660 1 T A scaffold2707 ScafM SNP 0037.scaffold00140 505670 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 505680 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 505730 1 C A scaffold2707 ScafM SNP 0037.scaffold00140 505755 1 G A scaffold2707 ScafM SNP 0037.scaffold00140 505758 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 505772 1 A G scaffold2707 ScafM INDEL 0037.scaffold00140 505802 3 AAT ... scaffold2707 ScafM SNP 0037.scaffold00140 505843 1 G A scaffold2707 ScafM SNP 0037.scaffold00140 505848 1 G A scaffold2707 ScafM SNP 0037.scaffold00140 505866 1 C T scaffold2707 ScafM INDEL 0037.scaffold00140 509758 1 . A scaffold51593 ScafM SNP 0037.scaffold00140 509838 1 T C scaffold51593 ScafM SNP 0037.scaffold00140 509872 1 C A scaffold51593 ScafM SNP 0037.scaffold00140 509932 1 T C scaffold51593 ScafM INDEL 0037.scaffold00140 510158 1 T . scaffold2707 ScafM SNP 0037.scaffold00140 510190 1 T C scaffold2707 ScafM SNP 0037.scaffold00140 510288 1 G A scaffold2707 ScafM SNP 0037.scaffold00140 510316 1 A G scaffold2707 ScafM SNP 0037.scaffold00140 510466 1 A C scaffold2707 ScafM INDEL 0037.scaffold00140 510543 4 TAAT .... scaffold2707 ScafM SNP 0037.scaffold00140 510952 1 G A scaffold46466 Both INDEL 0037.scaffold00140 511185 2 TT .. scaffold46466 ScafM INDEL 0037.scaffold00140 511562 30 .............................. TAGGGGCGGATCCAGCGTGGGTTCAGTGGG scaffold46466 ScafM SNP 0037.scaffold00140 517729 1 C T scaffold18894 ScafM SNP 0037.scaffold00140 517731 1 A G scaffold18894 ScafM SNP 0037.scaffold00140 525786 1 A G scaffold18894 ScafM SNP 0037.scaffold00140 536389 1 C G scaffold23241 ScafM SNP 0037.scaffold00140 536394 1 G A scaffold23241 ScafM SNP 0037.scaffold00140 536416 1 G A scaffold23241 ScafM SNP 0037.scaffold00140 536446 1 G A scaffold23241 ScafM INDEL 0037.scaffold00140 536509 1 C . scaffold23241 ScafM SNP 0037.scaffold00140 536554 1 A G scaffold23241 ScafM SNP 0037.scaffold00140 536570 1 A G scaffold23241 ScafM SNP 0037.scaffold00140 547550 1 T C scaffold10718 ScafM SNP 0037.scaffold00140 547578 1 G A scaffold10718 ScafM SNP 0037.scaffold00140 547584 1 G T scaffold10718 ScafM SNP 0037.scaffold00140 547624 2 AA GT scaffold10718 ScafM SNP 0037.scaffold00140 547634 1 G T scaffold10718 ScafM SNP 0037.scaffold00140 547639 1 A G scaffold10718 ScafM SNP 0037.scaffold00140 547641 1 T G scaffold10718 ScafM SNP 0037.scaffold00140 547644 1 T G scaffold10718 ScafM SNP 0037.scaffold00140 547647 1 T C scaffold10718 ScafM INDEL 0037.scaffold00140 549067 3 ... TTT scaffold20083 ScafM INDEL 0037.scaffold00140 549868 9 CCTCGCTTT ......... scaffold20083 ScafM INDEL 0037.scaffold00140 552556 1 T . scaffold20083 ScafM SNP 0037.scaffold00140 565168 1 T A scaffold47928 ScafM SNP 0037.scaffold00140 565243 1 C T scaffold47928 ScafM SNP 0037.scaffold00140 565254 1 G A scaffold47928 ScafM SNP 0037.scaffold00140 565264 1 C T scaffold47928 ReadM SNP 0037.scaffold00140 566508 1 A G - ScafM SNP 0037.scaffold00140 566642 1 G A scaffold6244 ScafM SNP 0037.scaffold00140 566645 1 A C scaffold6244 ScafM SNP 0037.scaffold00140 566652 1 C T scaffold6244 ScafM SNP 0037.scaffold00140 566677 2 AT GG scaffold6244 ScafM SNP 0037.scaffold00140 566691 1 T A scaffold6244 ScafM SNP 0037.scaffold00140 566735 1 C A scaffold6244 ScafM SNP 0037.scaffold00140 566757 1 A G scaffold6244 ScafM SNP 0037.scaffold00140 566773 2 TA AC scaffold6244 ScafM SNP 0037.scaffold00140 568396 1 A G scaffold5311 ScafM SNP 0037.scaffold00140 568504 1 G A scaffold5311 ScafM SNP 0037.scaffold00140 568706 1 C A scaffold5311 ScafM SNP 0037.scaffold00140 572231 1 G A scaffold5673 ScafM SNP 0037.scaffold00140 572352 2 CG TA scaffold8831 ScafM SNP 0037.scaffold00140 572361 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 572437 1 G T scaffold8831 ScafM INDEL 0037.scaffold00140 572473 1 . A scaffold8831 ScafM SNP 0037.scaffold00140 572509 1 C G scaffold8831 ScafM SNP 0037.scaffold00140 572542 1 G C scaffold8831 ScafM SNP 0037.scaffold00140 572547 1 T A scaffold8831 ScafM SNP 0037.scaffold00140 572553 1 A G scaffold8831 ScafM SNP 0037.scaffold00140 572563 1 A C scaffold8831 ScafM SNP 0037.scaffold00140 572586 1 G A scaffold8831 ScafM SNP 0037.scaffold00140 572603 1 T G scaffold8831 ScafM SNP 0037.scaffold00140 572610 1 G C scaffold8831 ScafM SNP 0037.scaffold00140 572623 1 A G scaffold8831 ScafM SNP 0037.scaffold00140 572650 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 572659 1 C G scaffold8831 ScafM SNP 0037.scaffold00140 572675 1 A T scaffold8831 ScafM SNP 0037.scaffold00140 572707 1 G C scaffold8831 ScafM INDEL 0037.scaffold00140 572713 1 . A scaffold8831 ScafM SNP 0037.scaffold00140 572717 2 GT AA scaffold8831 ScafM SNP 0037.scaffold00140 572721 1 C A scaffold8831 ScafM SNP 0037.scaffold00140 572783 2 AG GA scaffold8831 ScafM SNP 0037.scaffold00140 572919 1 G T scaffold8831 ScafM SNP 0037.scaffold00140 572945 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 572953 1 A T scaffold8831 ScafM SNP 0037.scaffold00140 572956 1 G A scaffold8831 ScafM SNP 0037.scaffold00140 572975 1 C A scaffold8831 ScafM SNP 0037.scaffold00140 572981 1 T A scaffold8831 ScafM SNP 0037.scaffold00140 572985 1 G A scaffold8831 ScafM SNP 0037.scaffold00140 572988 1 A G scaffold8831 ScafM SNP 0037.scaffold00140 573013 1 G A scaffold8831 ScafM SNP 0037.scaffold00140 573028 1 A G scaffold8831 ScafM INDEL 0037.scaffold00140 573052 6 CCCCCC ...... scaffold8831 ScafM SNP 0037.scaffold00140 573078 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 573100 1 T A scaffold8831 ScafM SNP 0037.scaffold00140 573136 1 A G scaffold8831 ScafM SNP 0037.scaffold00140 573232 1 G A scaffold8831 ScafM SNP 0037.scaffold00140 573234 1 C A scaffold8831 ScafM SNP 0037.scaffold00140 573238 1 G T scaffold8831 ScafM INDEL 0037.scaffold00140 573259 4 ..GG AATT scaffold8831 ScafM SNP 0037.scaffold00140 573271 1 T A scaffold8831 ScafM INDEL 0037.scaffold00140 573295 1 T . scaffold8831 ScafM INDEL 0037.scaffold00140 573299 1 A . scaffold8831 ScafM SNP 0037.scaffold00140 573321 1 G T scaffold8831 ScafM INDEL 0037.scaffold00140 573334 9 TGTTATTGT ......... scaffold8831 ScafM SNP 0037.scaffold00140 573365 1 G C scaffold8831 ScafM SNP 0037.scaffold00140 573419 1 C A scaffold8831 ScafM SNP 0037.scaffold00140 573456 2 AA TT scaffold8831 ScafM SNP 0037.scaffold00140 573496 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 573512 1 C T scaffold8831 ScafM SNP 0037.scaffold00140 578692 1 A C scaffold5311 ReadM SNP 0037.scaffold00140 587243 1 T G - ScafM SNP 0037.scaffold00140 594792 1 A T scaffold4094 ScafM SNP 0037.scaffold00140 594807 1 T A scaffold4094 ScafM SNP 0037.scaffold00140 594834 1 T C scaffold4094 ScafM SNP 0037.scaffold00140 594854 1 T G scaffold4094 ScafM SNP 0037.scaffold00140 594857 1 A G scaffold4094 ScafM SNP 0037.scaffold00140 594877 1 G A scaffold4094 ScafM INDEL 0037.scaffold00140 594894 55 ....................................................... AATACCTCTGTAGTAATCAAATGCATAGCTGACTTTGCAGCATCTATAAGTTGAG scaffold4094 ScafM INDEL 0037.scaffold00140 594896 4 .... GAAG scaffold4094 ScafM INDEL 0037.scaffold00140 594900 9 ......... TCCATCACG scaffold4094 ScafM INDEL 0037.scaffold00140 595323 63 ............................................................... AGTTGGGTCTTGGGGATACAAAGAGCTTAGCAAGAGAGACAAATTCCTTATGACATATTGCAC scaffold4094 ScafM SNP 0037.scaffold00140 596175 1 G C scaffold4094 ScafM SNP 0037.scaffold00140 596267 1 C T scaffold4094 ScafM INDEL 0037.scaffold00140 596296 3 ... CAA scaffold4094 ScafM INDEL 0037.scaffold00140 596366 1 . A scaffold4094 ScafM SNP 0037.scaffold00140 596471 1 T C scaffold4094 ScafM INDEL 0037.scaffold00140 596839 17 ................. TAATTCAAATCAAGTAG scaffold4094 ScafM SNP 0037.scaffold00140 599258 1 G T scaffold4094 ScafM INDEL 0037.scaffold00140 599326 8 ........ AACTCCCA scaffold4094 ScafM SNP 0037.scaffold00140 599574 1 T C scaffold4094 ScafM INDEL 0037.scaffold00140 599806 2 AT .. scaffold4094 ScafM SNP 0037.scaffold00140 599864 1 A G scaffold4094 ScafM SNP 0037.scaffold00140 599925 1 G T scaffold4094 ScafM SNP 0037.scaffold00140 599972 1 T C scaffold4094 ScafM SNP 0037.scaffold00140 600139 1 A T scaffold4094 ScafM SNP 0037.scaffold00140 600373 1 C T scaffold4094 ScafM SNP 0037.scaffold00140 600375 1 C A scaffold4094 ScafM INDEL 0037.scaffold00140 612014 7 ....... TTTAAAA scaffold15475 ScafM SNP 0037.scaffold00140 616109 1 C G scaffold26273 ScafM SNP 0037.scaffold00140 616118 2 CA TT scaffold26273 ReadM SNP 0037.scaffold00140 621785 1 T C - ScafM SNP 0037.scaffold00140 625587 1 C A scaffold15475 ScafM SNP 0037.scaffold00140 625650 1 G C scaffold15475 ScafM SNP 0037.scaffold00140 626081 1 C T scaffold15475 ScafM SNP 0037.scaffold00140 628260 1 G A scaffold15475 ScafM INDEL 0037.scaffold00140 628289 1 . T scaffold15475 ScafM SNP 0037.scaffold00140 628692 1 G C scaffold15475 ScafM SNP 0037.scaffold00140 628749 1 G T scaffold15475 ScafM SNP 0037.scaffold00140 628759 1 T C scaffold15475 ScafM SNP 0037.scaffold00140 628769 1 C A scaffold15475 ScafM INDEL 0037.scaffold00140 628792 2 AA .. scaffold15475 ScafM SNP 0037.scaffold00140 628854 1 A G scaffold15475 ScafM SNP 0037.scaffold00140 628879 1 G T scaffold15475 ScafM INDEL 0037.scaffold00140 628887 1 T . scaffold15475 ScafM SNP 0037.scaffold00140 628889 1 T C scaffold15475 ScafM SNP 0037.scaffold00140 628892 1 G A scaffold15475 ScafM INDEL 0037.scaffold00140 628897 1 . T scaffold15475 ScafM SNP 0037.scaffold00140 629204 1 A G scaffold26273 ScafM SNP 0037.scaffold00140 629254 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 629308 1 A G scaffold26273 ScafM INDEL 0037.scaffold00140 629321 1 . G scaffold26273 ScafM SNP 0037.scaffold00140 629325 1 G T scaffold26273 ScafM SNP 0037.scaffold00140 629339 1 C T scaffold26273 ScafM SNP 0037.scaffold00140 629719 1 T G scaffold26273 ScafM SNP 0037.scaffold00140 629750 1 A G scaffold26273 ScafM INDEL 0037.scaffold00140 629754 4 .... TCCA scaffold26273 ScafM SNP 0037.scaffold00140 629852 1 T A scaffold26273 ScafM SNP 0037.scaffold00140 630452 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 630541 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 630618 1 T C scaffold26273 ScafM SNP 0037.scaffold00140 630627 1 A C scaffold26273 ScafM SNP 0037.scaffold00140 630669 1 G C scaffold26273 ScafM SNP 0037.scaffold00140 630709 1 C T scaffold26273 ScafM SNP 0037.scaffold00140 630726 1 T C scaffold26273 ScafM SNP 0037.scaffold00140 630735 1 T C scaffold26273 ScafM INDEL 0037.scaffold00140 631210 2 .. TA scaffold26273 ScafM SNP 0037.scaffold00140 631438 1 G T scaffold26273 ScafM SNP 0037.scaffold00140 631478 1 G T scaffold26273 ScafM SNP 0037.scaffold00140 631642 1 C A scaffold26273 ScafM SNP 0037.scaffold00140 631689 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 631812 1 G T scaffold26273 ScafM SNP 0037.scaffold00140 631832 1 C A scaffold26273 ScafM INDEL 0037.scaffold00140 632124 4 ACCA .... scaffold26273 ScafM SNP 0037.scaffold00140 632189 1 T A scaffold26273 ScafM SNP 0037.scaffold00140 632306 1 T G scaffold26273 ScafM INDEL 0037.scaffold00140 632421 1 T . scaffold26273 ScafM SNP 0037.scaffold00140 632709 1 A T scaffold26273 ScafM SNP 0037.scaffold00140 632736 4 TTTT GGGG scaffold26273 ScafM SNP 0037.scaffold00140 632767 2 TA GG scaffold26273 ScafM INDEL 0037.scaffold00140 632771 1 G . scaffold26273 ScafM INDEL 0037.scaffold00140 632775 1 G . scaffold26273 ScafM SNP 0037.scaffold00140 632787 1 T C scaffold26273 ScafM INDEL 0037.scaffold00140 632811 2 .. AA scaffold26273 ScafM SNP 0037.scaffold00140 632818 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 632862 1 T C scaffold26273 ScafM SNP 0037.scaffold00140 632919 1 T C scaffold26273 ScafM SNP 0037.scaffold00140 632964 1 A G scaffold26273 ScafM INDEL 0037.scaffold00140 633195 2 .. TT scaffold26273 ScafM SNP 0037.scaffold00140 633234 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 633250 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 633267 1 C T scaffold26273 ScafM INDEL 0037.scaffold00140 633450 39 ....................................... TTACCTTAAGATTTAATGATTCATCATTAACGGTGCTCT scaffold26273 ScafM INDEL 0037.scaffold00140 634161 1 . A scaffold26273 ScafM SNP 0037.scaffold00140 634210 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 634256 1 A G scaffold26273 ScafM SNP 0037.scaffold00140 634269 1 A G scaffold26273 ScafM SNP 0037.scaffold00140 634346 1 C T scaffold26273 ScafM SNP 0037.scaffold00140 634363 1 C G scaffold26273 ScafM SNP 0037.scaffold00140 634771 1 G C scaffold26273 ScafM SNP 0037.scaffold00140 634797 1 T C scaffold26273 ScafM SNP 0037.scaffold00140 634917 1 G A scaffold26273 ScafM SNP 0037.scaffold00140 635312 1 C T scaffold26273 ScafM SNP 0037.scaffold00140 638014 1 T G scaffold33851 ScafM SNP 0037.scaffold00140 641314 1 T C scaffold6149 ScafM SNP 0037.scaffold00140 641528 1 T C scaffold6149 ScafM SNP 0037.scaffold00140 641576 1 T A scaffold6149 ScafM SNP 0037.scaffold00140 642154 1 T A scaffold6149 ScafM SNP 0037.scaffold00140 642236 1 A G scaffold6149 ScafM SNP 0037.scaffold00140 642267 1 T C scaffold6149 ScafM SNP 0037.scaffold00140 642319 1 G A scaffold6149 ScafM SNP 0037.scaffold00140 642384 1 G C scaffold6149 ScafM SNP 0037.scaffold00140 642402 1 A G scaffold6149 ScafM SNP 0037.scaffold00140 642431 1 A G scaffold6149 ScafM SNP 0037.scaffold00140 642509 1 G A scaffold6149 ScafM SNP 0037.scaffold00140 642523 1 C T scaffold6149 ScafM SNP 0037.scaffold00140 642678 1 C T scaffold6149 ScafM SNP 0037.scaffold00140 642907 1 A T scaffold6149 ScafM SNP 0037.scaffold00140 642918 1 G T scaffold6149 ScafM SNP 0037.scaffold00140 642938 1 C A scaffold6149 ScafM INDEL 0037.scaffold00140 644816 1 T . scaffold6888 ScafM SNP 0037.scaffold00140 644818 1 C A scaffold6888 ScafM SNP 0037.scaffold00140 644861 1 A C scaffold6888 ScafM SNP 0037.scaffold00140 648902 1 T C C19704521 ScafM SNP 0037.scaffold00140 649620 1 A C scaffold22335 ScafM SNP 0037.scaffold00140 649635 3 ATA GAC scaffold22335 ScafM SNP 0037.scaffold00140 649642 1 T A scaffold22335 ScafM SNP 0037.scaffold00140 649645 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649647 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649651 1 G C scaffold22335 ScafM SNP 0037.scaffold00140 649661 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649668 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649676 1 A C scaffold22335 ScafM SNP 0037.scaffold00140 649680 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649707 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649738 2 CG TA scaffold22335 ScafM SNP 0037.scaffold00140 649742 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649752 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649764 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649767 1 A C scaffold22335 ScafM SNP 0037.scaffold00140 649774 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649778 1 C A scaffold22335 ScafM SNP 0037.scaffold00140 649785 1 A C scaffold22335 ScafM INDEL 0037.scaffold00140 649786 1 . T scaffold22335 ScafM SNP 0037.scaffold00140 649788 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649800 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649811 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649837 1 C A scaffold22335 ScafM SNP 0037.scaffold00140 649840 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649844 1 G A scaffold22335 ScafM SNP 0037.scaffold00140 649862 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649867 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649876 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649883 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649885 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649889 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649903 1 G A scaffold22335 ScafM SNP 0037.scaffold00140 649907 1 C T scaffold22335 ScafM SNP 0037.scaffold00140 649911 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649913 2 AG GT scaffold22335 ScafM SNP 0037.scaffold00140 649919 1 C A scaffold22335 ScafM SNP 0037.scaffold00140 649924 1 G A scaffold22335 ScafM SNP 0037.scaffold00140 649926 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649933 2 AT CC scaffold22335 ScafM SNP 0037.scaffold00140 649943 1 A G scaffold22335 ScafM SNP 0037.scaffold00140 649946 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 649957 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649959 2 TG CA scaffold22335 ScafM INDEL 0037.scaffold00140 649967 1 A . scaffold22335 ScafM INDEL 0037.scaffold00140 649969 1 . C scaffold22335 ScafM SNP 0037.scaffold00140 649976 2 TT AG scaffold22335 ScafM SNP 0037.scaffold00140 649980 1 G A scaffold22335 ScafM SNP 0037.scaffold00140 649992 1 A C scaffold22335 ScafM SNP 0037.scaffold00140 649994 1 T C scaffold22335 ScafM SNP 0037.scaffold00140 649996 1 T G scaffold22335 ScafM SNP 0037.scaffold00140 657592 1 T C scaffold27205 ScafM INDEL 0037.scaffold00140 657830 1 . A scaffold27205 ScafM SNP 0037.scaffold00140 658081 1 A G scaffold27205 ScafM SNP 0037.scaffold00140 658161 1 A G scaffold27205 ScafM SNP 0037.scaffold00140 658406 1 C A scaffold27205 ScafM INDEL 0037.scaffold00140 658468 2 GG .. scaffold27205 ScafM SNP 0037.scaffold00140 658480 2 AA GT scaffold27205 ScafM SNP 0037.scaffold00140 658540 1 A G scaffold27205 ScafM SNP 0037.scaffold00140 658706 1 C T scaffold27205 ScafM INDEL 0037.scaffold00140 659019 64 ................................................................ AGTGCTCGTGCTCGTTTTCGTGTTAGTGTAAATTCATCGATTCTAATAATAGGACCCACAGGTT scaffold27205 ScafM SNP 0037.scaffold00140 659033 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 659063 1 C A scaffold27205 ScafM SNP 0037.scaffold00140 659089 1 A C scaffold27205 ScafM SNP 0037.scaffold00140 659296 1 A C scaffold27205 ScafM SNP 0037.scaffold00140 659373 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 659414 1 A G scaffold27205 ScafM SNP 0037.scaffold00140 659462 1 A T scaffold27205 ScafM SNP 0037.scaffold00140 659505 1 A G scaffold27205 ScafM SNP 0037.scaffold00140 659535 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 659838 1 T C scaffold27205 ScafM SNP 0037.scaffold00140 659873 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 659930 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 660044 1 G A scaffold27205 ScafM SNP 0037.scaffold00140 660074 1 T G scaffold27205 ScafM SNP 0037.scaffold00140 660099 1 C G scaffold27205 ScafM INDEL 0037.scaffold00140 663543 1 T . scaffold41994 ScafM SNP 0037.scaffold00140 663571 1 G C scaffold41994 ScafM SNP 0037.scaffold00140 663578 1 T C scaffold41994 ScafM SNP 0037.scaffold00140 663614 1 T C scaffold41994 ScafM SNP 0037.scaffold00140 663666 1 A T scaffold41994 ScafM SNP 0037.scaffold00140 663689 1 T C scaffold41994 ScafM SNP 0037.scaffold00140 663700 1 T C scaffold41994 ScafM INDEL 0037.scaffold00140 663701 1 . A scaffold41994 ScafM SNP 0037.scaffold00140 663736 1 A C scaffold41994 ScafM SNP 0037.scaffold00140 663958 1 A T scaffold41994 ScafM SNP 0037.scaffold00140 664108 1 G A scaffold41994 ScafM SNP 0037.scaffold00140 664149 1 T G scaffold41994 ScafM SNP 0037.scaffold00140 667373 1 A C scaffold9206 ScafM SNP 0037.scaffold00140 667423 1 G C scaffold9206 ScafM SNP 0037.scaffold00140 668723 1 T A scaffold21484 ScafM SNP 0037.scaffold00140 669979 1 C A scaffold21484 ScafM SNP 0037.scaffold00140 670163 1 G C scaffold21484 ScafM SNP 0037.scaffold00140 684967 1 A T C19689407 ScafM SNP 0037.scaffold00140 684995 1 A G C19689407 ScafM INDEL 0037.scaffold00140 685023 6 TTTTTT ...... C19689407 ScafM SNP 0037.scaffold00140 686881 1 G C scaffold62908 ScafM SNP 0037.scaffold00140 688629 1 T A scaffold62908 ReadM SNP 0037.scaffold00140 689356 1 T C - ScafM SNP 0037.scaffold00140 694140 1 C A scaffold14862 ScafM SNP 0037.scaffold00140 694264 1 C A scaffold14862 ScafM SNP 0037.scaffold00140 698863 1 A G scaffold3843 ScafM SNP 0037.scaffold00140 698869 1 T C scaffold3843 ScafM SNP 0037.scaffold00140 709081 1 C T scaffold25992 ScafM SNP 0037.scaffold00140 709104 1 G C scaffold25992 ScafM SNP 0037.scaffold00140 709113 1 A G scaffold25992 ScafM SNP 0037.scaffold00140 709143 1 G T scaffold25992 ScafM SNP 0037.scaffold00140 709146 1 A T scaffold25992 ScafM SNP 0037.scaffold00140 709159 1 G C scaffold25992 ScafM SNP 0037.scaffold00140 709186 1 T A scaffold25992 ScafM SNP 0037.scaffold00140 709196 1 T C scaffold25992 ScafM SNP 0037.scaffold00140 709242 1 G A scaffold25992 ScafM SNP 0037.scaffold00140 709269 1 T C scaffold25992 ScafM INDEL 0037.scaffold00140 709296 2 .. TT scaffold25992 ScafM SNP 0037.scaffold00140 709321 1 C T scaffold25992 ScafM SNP 0037.scaffold00140 709356 1 A G scaffold25992 ScafM INDEL 0037.scaffold00140 709374 1 . C scaffold25992 ScafM SNP 0037.scaffold00140 709453 1 T C scaffold25992 ScafM INDEL 0037.scaffold00140 709473 1 . A scaffold25992 ScafM SNP 0037.scaffold00140 710551 1 T A scaffold66905 ScafM SNP 0037.scaffold00140 711453 1 A T scaffold66905 ScafM SNP 0037.scaffold00140 711636 1 C T scaffold66905 ScafM SNP 0037.scaffold00140 715699 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 715733 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 715753 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 716901 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 717577 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 717716 1 A G scaffold22062 ScafM INDEL 0037.scaffold00140 717759 3 ... ACC scaffold22062 ScafM SNP 0037.scaffold00140 717765 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 717986 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 718046 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 718139 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 718337 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 718403 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 718447 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 718530 1 C T scaffold22062 ScafM INDEL 0037.scaffold00140 718550 13 ............. AAAACAATTTTAC scaffold22062 ScafM INDEL 0037.scaffold00140 718570 7 TGTTGTT ..AAACA scaffold22062 ScafM INDEL 0037.scaffold00140 718615 1 T . scaffold22062 ScafM SNP 0037.scaffold00140 718694 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 718698 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 718853 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 718898 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 719003 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 719123 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 719143 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 719157 1 C T scaffold22062 ScafM INDEL 0037.scaffold00140 719198 1 . A scaffold22062 ScafM SNP 0037.scaffold00140 719327 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 719372 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 719438 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 719481 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 719484 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 719514 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 719565 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 719675 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 719708 2 AA .. scaffold22062 ScafM SNP 0037.scaffold00140 719713 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 719717 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 719736 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 719741 1 G A scaffold22062 ScafM INDEL 0037.scaffold00140 719748 1 . C scaffold22062 ScafM SNP 0037.scaffold00140 719770 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 722374 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 722408 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 722495 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 722655 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 722740 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 722786 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 722789 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 722900 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 722949 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 723173 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 723186 1 . G scaffold22062 ScafM SNP 0037.scaffold00140 723226 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 723398 1 G C scaffold22062 ScafM INDEL 0037.scaffold00140 723425 8 ........ GCCGGGTT scaffold22062 ScafM SNP 0037.scaffold00140 723611 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 723646 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 723731 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 723740 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 723787 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 723831 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 723836 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 724286 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 724660 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 724678 4 GTAG .... scaffold22062 ScafM SNP 0037.scaffold00140 724738 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 724849 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 724899 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 724913 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 725053 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 725075 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 725108 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 725111 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 725133 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 725299 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 725319 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 725460 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 725463 2 TA CT scaffold22062 ScafM SNP 0037.scaffold00140 725478 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 725611 1 G T scaffold22062 ScafM INDEL 0037.scaffold00140 725890 1 C . scaffold22062 ScafM SNP 0037.scaffold00140 725892 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 725923 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 725971 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 725988 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 726003 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 726044 1 T . scaffold22062 ScafM INDEL 0037.scaffold00140 726117 1 . T scaffold22062 ScafM INDEL 0037.scaffold00140 726129 3 ... AAA scaffold22062 ScafM SNP 0037.scaffold00140 726131 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 726138 2 TT CC scaffold22062 ScafM SNP 0037.scaffold00140 726145 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 726203 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 726213 1 G T scaffold22062 ScafM INDEL 0037.scaffold00140 726311 2 TT .. scaffold22062 ScafM SNP 0037.scaffold00140 726325 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 726345 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 726454 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 726465 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 726638 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 726661 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 726665 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 726693 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 726842 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 726916 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 727149 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 727158 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 727195 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 727275 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 727303 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 727465 2 AG TT scaffold22062 ScafM SNP 0037.scaffold00140 727490 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 727563 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 727569 2 GT AC scaffold22062 ScafM SNP 0037.scaffold00140 727624 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 727641 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 727796 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 727801 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 727812 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 727835 1 G A scaffold22062 ScafM INDEL 0037.scaffold00140 727840 1 . A scaffold22062 ScafM SNP 0037.scaffold00140 727857 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 727862 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 727888 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 727896 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 727917 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 727943 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 727963 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 728076 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 728139 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 728201 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 728323 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 728469 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 728553 1 C A scaffold22062 ScafM SNP 0037.scaffold00140 728603 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 728616 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 728620 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 728750 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 728783 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 728806 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 728832 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 728876 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 728941 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 728972 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 729018 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 729029 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 729038 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 729056 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 729114 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 729164 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 729199 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 732362 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 732379 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 732470 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 732474 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 732547 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 732556 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 732655 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 732755 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 732806 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 732823 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 732826 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 732828 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 732894 1 T A scaffold22062 ScafM INDEL 0037.scaffold00140 732906 4 CAAG .... scaffold22062 ScafM SNP 0037.scaffold00140 732949 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 732962 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 733171 2 AA TC scaffold22062 ScafM SNP 0037.scaffold00140 733218 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 733274 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 733320 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 733445 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 733463 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 733507 1 A . scaffold22062 ScafM SNP 0037.scaffold00140 733528 1 C T scaffold22062 ScafM INDEL 0037.scaffold00140 733531 1 . A scaffold22062 ScafM SNP 0037.scaffold00140 733547 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 733549 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 733594 2 GA CC scaffold22062 ScafM SNP 0037.scaffold00140 733605 2 TT CA scaffold22062 ScafM INDEL 0037.scaffold00140 733722 3 ATC ... scaffold22062 ScafM SNP 0037.scaffold00140 733742 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 733749 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 733767 1 A . scaffold22062 ScafM SNP 0037.scaffold00140 733786 1 A C scaffold22062 ScafM INDEL 0037.scaffold00140 733805 1 G . scaffold22062 ScafM INDEL 0037.scaffold00140 733827 3 ... AAA scaffold22062 ScafM SNP 0037.scaffold00140 733829 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 733859 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 733933 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 733938 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 733941 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 733962 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 734009 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 734045 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 734230 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 734347 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 734392 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 734429 2 CA TT scaffold22062 ScafM INDEL 0037.scaffold00140 734492 4 .... GGGG scaffold22062 ScafM SNP 0037.scaffold00140 734511 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 734513 1 A G scaffold22062 ScafM INDEL 0037.scaffold00140 734515 1 . T scaffold22062 ScafM INDEL 0037.scaffold00140 734799 1 A . scaffold22062 ScafM SNP 0037.scaffold00140 734853 2 AG TA scaffold22062 ScafM SNP 0037.scaffold00140 734861 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 734866 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 734953 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 734960 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 734972 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 734975 1 C T scaffold22062 ScafM INDEL 0037.scaffold00140 735396 7 TTCAGAT ....... scaffold22062 ScafM INDEL 0037.scaffold00140 735405 1 A . scaffold22062 ScafM INDEL 0037.scaffold00140 735408 15 GATTGTTATTAACTT ............... scaffold22062 ScafM SNP 0037.scaffold00140 735450 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 735520 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 735562 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 735638 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 735835 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 735863 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 735902 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 735935 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 735943 1 A C scaffold22062 ScafM INDEL 0037.scaffold00140 735981 9 TTTTTTGGG ......... scaffold22062 ScafM INDEL 0037.scaffold00140 735999 3 CAT ... scaffold22062 ScafM INDEL 0037.scaffold00140 736113 5 ..... ATTAA scaffold22062 ScafM SNP 0037.scaffold00140 736115 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 736180 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 736189 1 C A scaffold22062 ScafM INDEL 0037.scaffold00140 736191 6 ...... GGCGGT scaffold22062 ScafM SNP 0037.scaffold00140 736232 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 736234 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 736303 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 736313 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 736369 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 736575 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 736631 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 736924 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 736961 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 737010 1 C T scaffold22062 ScafM INDEL 0037.scaffold00140 737074 1 . A scaffold22062 ScafM SNP 0037.scaffold00140 738803 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 738852 1 G A scaffold22062 ScafM INDEL 0037.scaffold00140 738905 18 ATTTATAAGAAAACTTTA .................. scaffold22062 ScafM SNP 0037.scaffold00140 738969 1 A T scaffold22062 ScafM SNP 0037.scaffold00140 739008 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 739079 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 739310 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 739346 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 739356 1 T A scaffold22062 ScafM SNP 0037.scaffold00140 739384 1 T C scaffold22062 ScafM SNP 0037.scaffold00140 739397 1 A C scaffold22062 ScafM SNP 0037.scaffold00140 739442 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 739476 1 T G scaffold22062 ScafM SNP 0037.scaffold00140 739525 1 G A scaffold22062 ScafM INDEL 0037.scaffold00140 739558 2 TT .. scaffold22062 ScafM SNP 0037.scaffold00140 739611 1 C T scaffold22062 ScafM SNP 0037.scaffold00140 739620 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 739929 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 739968 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 740011 1 C G scaffold22062 ScafM SNP 0037.scaffold00140 740031 1 G A scaffold22062 ScafM INDEL 0037.scaffold00140 740051 6 ...... CAGGAA scaffold22062 ScafM SNP 0037.scaffold00140 740053 1 T C scaffold22062 ScafM INDEL 0037.scaffold00140 740078 2 GT .C scaffold22062 ScafM SNP 0037.scaffold00140 740090 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 740101 1 G T scaffold22062 ScafM SNP 0037.scaffold00140 740148 1 G C scaffold22062 ScafM SNP 0037.scaffold00140 740228 1 G A scaffold22062 ScafM SNP 0037.scaffold00140 740272 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 740309 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 740320 1 A G scaffold22062 ScafM SNP 0037.scaffold00140 740901 1 G T scaffold34877 ScafM INDEL 0037.scaffold00140 740910 1 . T scaffold34877 ScafM SNP 0037.scaffold00140 741606 1 T G scaffold34877 ScafM SNP 0037.scaffold00140 741628 2 AA TT scaffold34877 ScafM SNP 0037.scaffold00140 742444 1 G T scaffold22062 ScafM INDEL 0037.scaffold00140 744065 23 ....................... AAAAAAACACAAGATAGAGTTGT scaffold47531 ScafM SNP 0037.scaffold00140 744140 1 C A scaffold47531 ScafM INDEL 0037.scaffold00140 744824 1 T . scaffold47531 ScafM SNP 0037.scaffold00140 745189 1 A G scaffold47531 ScafM SNP 0037.scaffold00140 745200 1 A C scaffold47531 ScafM SNP 0037.scaffold00140 745223 1 A T scaffold47531 ScafM SNP 0037.scaffold00140 745278 1 G A scaffold47531 ScafM SNP 0037.scaffold00140 745512 1 G A scaffold2536 ScafM SNP 0037.scaffold00140 745681 1 A T scaffold2536 ScafM SNP 0037.scaffold00140 745716 1 C T scaffold2536 ScafM SNP 0037.scaffold00140 745758 1 C T scaffold2536 ScafM SNP 0037.scaffold00140 745918 1 G A scaffold2536 ScafM SNP 0037.scaffold00140 748814 1 T A scaffold11821 ScafM SNP 0037.scaffold00140 748820 1 G C scaffold11821 ScafM SNP 0037.scaffold00140 748862 1 A C scaffold11821 ScafM SNP 0037.scaffold00140 749794 1 T C scaffold11821 ScafM SNP 0037.scaffold00140 749861 1 C G scaffold11821 ScafM SNP 0037.scaffold00140 749954 1 G T scaffold11821 ScafM SNP 0037.scaffold00140 750784 1 C T scaffold11821 ScafM INDEL 0037.scaffold00140 772140 1 . T scaffold14009 ScafM SNP 0037.scaffold00140 772213 1 G A scaffold14009 ScafM SNP 0037.scaffold00140 775264 1 C T scaffold14009 ScafM INDEL 0037.scaffold00140 776303 2 AA .. scaffold14009 ScafM SNP 0037.scaffold00140 776315 1 A G scaffold14009 ScafM INDEL 0037.scaffold00140 778731 7 TTATATG ....... scaffold14009 ScafM SNP 0037.scaffold00140 778784 1 A G scaffold14009 ScafM SNP 0037.scaffold00140 778866 1 T C scaffold14009 ScafM SNP 0037.scaffold00140 778991 1 G T scaffold14009 ScafM SNP 0037.scaffold00140 780097 1 C A scaffold14009 ReadM INDEL 0037.scaffold00140 780313 1 . T - ScafM INDEL 0037.scaffold00140 780573 14 .............. CATTTAACCCTTCC scaffold14009 ScafM SNP 0037.scaffold00140 780590 1 C A scaffold14009 ScafM SNP 0037.scaffold00140 780597 1 G A scaffold14009 ScafM INDEL 0037.scaffold00140 780667 3 ... AAC scaffold14009 ScafM SNP 0037.scaffold00140 780730 1 T G scaffold14009 ScafM SNP 0037.scaffold00140 780789 1 A C scaffold14009 ScafM SNP 0037.scaffold00140 780791 1 C A scaffold14009 ScafM SNP 0037.scaffold00140 781048 1 T A scaffold14009 ScafM SNP 0037.scaffold00140 781099 1 C T scaffold14009 ScafM SNP 0037.scaffold00140 781124 1 T C scaffold14009 ScafM SNP 0037.scaffold00140 781171 1 A G scaffold14009 ScafM SNP 0037.scaffold00140 781181 1 T C scaffold14009 ScafM SNP 0037.scaffold00140 785033 1 A G scaffold53535 ScafM SNP 0037.scaffold00140 785092 1 T C scaffold53535 ScafM SNP 0037.scaffold00140 785872 1 G A scaffold36132 ScafM INDEL 0037.scaffold00140 785889 5 TTTAA ..... scaffold36132 ScafM SNP 0037.scaffold00140 786009 1 A G scaffold36132 ScafM SNP 0037.scaffold00140 786043 1 G A scaffold36132 ScafM SNP 0037.scaffold00140 786108 1 T A scaffold36132 ScafM SNP 0037.scaffold00140 786148 1 C A scaffold36132 ScafM INDEL 0037.scaffold00140 786151 1 . T scaffold36132 ScafM SNP 0037.scaffold00140 786162 1 A C scaffold36132 ScafM INDEL 0037.scaffold00140 786277 1 T . scaffold36132 ScafM SNP 0037.scaffold00140 786334 1 T C scaffold36132 ScafM SNP 0037.scaffold00140 786387 1 A T scaffold36132 ScafM SNP 0037.scaffold00140 786410 1 G A scaffold36132 ScafM INDEL 0037.scaffold00140 786466 1 . A scaffold36132 ScafM SNP 0037.scaffold00140 786468 1 T A scaffold36132 ScafM SNP 0037.scaffold00140 786495 1 A C scaffold36132 ScafM SNP 0037.scaffold00140 794218 1 G A scaffold64616 ScafM SNP 0037.scaffold00140 794297 1 A G scaffold64616 ScafM SNP 0037.scaffold00140 794394 1 A G scaffold64616 ScafM SNP 0037.scaffold00140 797336 1 G T scaffold58431 ScafM SNP 0037.scaffold00140 797451 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 797468 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 797472 1 T G scaffold58431 ScafM SNP 0037.scaffold00140 797479 1 A C scaffold58431 ScafM SNP 0037.scaffold00140 797510 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 797587 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 797589 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 797657 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 797744 1 T C scaffold58431 ScafM INDEL 0037.scaffold00140 797757 1 C . scaffold58431 ScafM INDEL 0037.scaffold00140 797796 36 .................................... AATGTTAACCCTTTTAGTATCAATTAAACACTTGAA scaffold58431 ScafM INDEL 0037.scaffold00140 797797 10 .......... TACCAATTTA scaffold58431 ScafM SNP 0037.scaffold00140 797859 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 797926 1 G A scaffold58431 ScafM INDEL 0037.scaffold00140 797956 1 G . scaffold58431 ScafM SNP 0037.scaffold00140 798061 1 T A scaffold58431 ScafM SNP 0037.scaffold00140 798115 3 AAC GCA scaffold58431 ScafM SNP 0037.scaffold00140 798206 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 798233 1 G A scaffold58431 ScafM INDEL 0037.scaffold00140 798288 12 ............ ACTTACAAAAGA scaffold58431 ScafM SNP 0037.scaffold00140 798295 1 G C scaffold58431 ScafM SNP 0037.scaffold00140 798357 1 T G scaffold58431 ScafM SNP 0037.scaffold00140 798372 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 798376 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 798582 1 T G scaffold58431 ScafM SNP 0037.scaffold00140 798658 1 T A scaffold58431 ScafM SNP 0037.scaffold00140 798677 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 798738 1 T G scaffold58431 ScafM SNP 0037.scaffold00140 798756 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 798823 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 798976 1 T G scaffold58431 ScafM SNP 0037.scaffold00140 799000 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 799012 1 C T scaffold58431 ScafM INDEL 0037.scaffold00140 799023 1 T . scaffold58431 ScafM SNP 0037.scaffold00140 799059 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 799167 1 G T scaffold58431 ScafM SNP 0037.scaffold00140 799255 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 799843 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 799896 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 799907 1 T A scaffold58431 ScafM SNP 0037.scaffold00140 799956 1 G T scaffold58431 ScafM SNP 0037.scaffold00140 799964 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 800025 2 TT AA scaffold58431 ScafM SNP 0037.scaffold00140 800081 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 800705 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 800722 1 G C scaffold58431 ScafM SNP 0037.scaffold00140 800769 1 G C scaffold58431 ScafM SNP 0037.scaffold00140 800792 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 800860 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 800864 1 G A scaffold58431 ScafM INDEL 0037.scaffold00140 801161 1 T . scaffold58431 ScafM SNP 0037.scaffold00140 801163 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 801212 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 801385 1 A T scaffold58431 ScafM SNP 0037.scaffold00140 801412 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 801433 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 801449 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 801461 1 C G scaffold58431 ScafM SNP 0037.scaffold00140 816739 1 C T scaffold58431 ScafM INDEL 0037.scaffold00140 816891 1 . G scaffold58431 ScafM SNP 0037.scaffold00140 816964 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 816983 1 A C scaffold58431 ScafM SNP 0037.scaffold00140 817014 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 817040 1 C T scaffold58431 ScafM SNP 0037.scaffold00140 817096 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 817123 1 T C scaffold58431 ScafM SNP 0037.scaffold00140 817194 1 C A scaffold58431 ScafM INDEL 0037.scaffold00140 817309 5 AAGAG ..... scaffold58431 ScafM INDEL 0037.scaffold00140 817317 17 TTGTACCCAGGGTAGGC ................. scaffold58431 ScafM INDEL 0037.scaffold00140 817336 3 GAG ... scaffold58431 ScafM SNP 0037.scaffold00140 817344 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 817353 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 817357 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 817426 1 G T scaffold58431 ScafM SNP 0037.scaffold00140 817462 1 A G scaffold58431 ScafM INDEL 0037.scaffold00140 817480 5 TCACC ..... scaffold58431 ScafM SNP 0037.scaffold00140 817518 1 C G scaffold58431 ScafM SNP 0037.scaffold00140 817526 1 A G scaffold58431 ScafM SNP 0037.scaffold00140 817533 1 T C scaffold58431 ScafM INDEL 0037.scaffold00140 817546 1 . T scaffold58431 ScafM SNP 0037.scaffold00140 817561 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 817572 1 G A scaffold58431 ScafM SNP 0037.scaffold00140 819326 1 A G scaffold57261 ScafM SNP 0037.scaffold00140 819399 1 T G scaffold57261 ScafM SNP 0037.scaffold00140 819452 1 A G scaffold57261 ScafM SNP 0037.scaffold00140 819607 1 A T scaffold57261 ScafM SNP 0037.scaffold00140 820682 1 G A scaffold25354 ScafM SNP 0037.scaffold00140 820848 1 C A scaffold25354 ScafM SNP 0037.scaffold00140 820974 1 A G scaffold25354 ScafM SNP 0037.scaffold00140 821120 1 T A scaffold25354 ScafM SNP 0037.scaffold00140 821142 1 A T scaffold25354 ScafM SNP 0037.scaffold00140 821208 1 C G scaffold25354 ScafM SNP 0037.scaffold00140 821314 1 G A scaffold25354 ScafM SNP 0037.scaffold00140 821443 1 A T scaffold25354 ScafM SNP 0037.scaffold00140 821545 1 A G scaffold25354 ScafM SNP 0037.scaffold00140 821959 1 C T scaffold25354 ScafM SNP 0037.scaffold00140 822030 1 T G scaffold25354 ScafM SNP 0037.scaffold00140 822507 1 C T scaffold25354 ScafM SNP 0037.scaffold00140 822720 1 C A scaffold25354 ScafM SNP 0037.scaffold00140 822836 1 A G scaffold25354 ScafM SNP 0037.scaffold00140 822861 1 G A scaffold25354 ScafM SNP 0037.scaffold00140 822926 1 T A scaffold25354 ScafM SNP 0037.scaffold00140 822929 1 A T scaffold25354 ScafM SNP 0037.scaffold00140 823067 1 C T scaffold25354 ScafM SNP 0037.scaffold00140 823473 1 A G scaffold25354 ScafM INDEL 0037.scaffold00140 823587 1 . T scaffold25354 ScafM SNP 0037.scaffold00140 823679 1 A G scaffold25354 ScafM SNP 0037.scaffold00140 823730 1 G A scaffold25354 ScafM INDEL 0037.scaffold00140 824437 8 ATTGTAGA ........ scaffold11267 ScafM INDEL 0037.scaffold00140 824485 2 .. TG scaffold11267 ScafM SNP 0037.scaffold00140 824528 1 C G scaffold11267 ScafM SNP 0037.scaffold00140 824590 1 A G scaffold11267 ScafM SNP 0037.scaffold00140 824683 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825036 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825093 1 C G scaffold11267 ScafM SNP 0037.scaffold00140 825132 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825165 1 G A scaffold11267 ScafM SNP 0037.scaffold00140 825177 1 T G scaffold11267 ScafM SNP 0037.scaffold00140 825243 1 A C scaffold11267 ScafM SNP 0037.scaffold00140 825254 1 A G scaffold11267 ScafM SNP 0037.scaffold00140 825543 1 A G scaffold11267 ScafM SNP 0037.scaffold00140 825844 1 C G scaffold11267 ScafM SNP 0037.scaffold00140 825858 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825864 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825892 1 G C scaffold11267 ScafM INDEL 0037.scaffold00140 825902 49 ................................................. AACATGCTGGCACAAGCTCCTCAAACTATAACATAATTAGATTACAGAG scaffold11267 ScafM INDEL 0037.scaffold00140 825903 4 .... AAAA scaffold11267 ScafM SNP 0037.scaffold00140 825932 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 825978 1 T G scaffold11267 ScafM SNP 0037.scaffold00140 826026 1 A C scaffold11267 ScafM SNP 0037.scaffold00140 826034 1 C A scaffold11267 ScafM SNP 0037.scaffold00140 826041 1 G C scaffold11267 ScafM SNP 0037.scaffold00140 826143 1 T A scaffold11267 ScafM SNP 0037.scaffold00140 826145 1 T A scaffold11267 ScafM SNP 0037.scaffold00140 826151 1 A T scaffold11267 ScafM SNP 0037.scaffold00140 826153 3 AAT GGC scaffold11267 ScafM SNP 0037.scaffold00140 826159 1 A T scaffold11267 ScafM INDEL 0037.scaffold00140 826161 3 CAT .TG scaffold11267 ScafM SNP 0037.scaffold00140 826165 1 T A scaffold11267 ScafM INDEL 0037.scaffold00140 826170 2 AG .. scaffold11267 ScafM SNP 0037.scaffold00140 826173 1 A T scaffold11267 ScafM SNP 0037.scaffold00140 826205 1 C A scaffold11267 ScafM SNP 0037.scaffold00140 826207 1 C T scaffold11267 ScafM SNP 0037.scaffold00140 826209 1 C T scaffold11267 ScafM INDEL 0037.scaffold00140 826211 3 ... AGA scaffold11267 ScafM SNP 0037.scaffold00140 826212 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 826215 1 T G scaffold11267 ScafM SNP 0037.scaffold00140 826217 2 TC AA scaffold11267 ScafM SNP 0037.scaffold00140 826220 3 TTT ACC scaffold11267 ScafM INDEL 0037.scaffold00140 826226 1 G . scaffold11267 ScafM INDEL 0037.scaffold00140 826229 3 AAA ... scaffold11267 ScafM SNP 0037.scaffold00140 826234 1 G T scaffold11267 ScafM SNP 0037.scaffold00140 826237 3 AGA TTC scaffold11267 ScafM SNP 0037.scaffold00140 826242 1 G T scaffold11267 ScafM INDEL 0037.scaffold00140 826243 2 .. TC scaffold11267 ScafM INDEL 0037.scaffold00140 826244 2 .. CC scaffold11267 ScafM SNP 0037.scaffold00140 826246 1 C T scaffold11267 ScafM SNP 0037.scaffold00140 826248 4 GCAA CTTG scaffold11267 ScafM INDEL 0037.scaffold00140 826256 1 C . scaffold11267 ScafM SNP 0037.scaffold00140 826288 1 C T scaffold11267 ScafM INDEL 0037.scaffold00140 826297 3 ... AAG scaffold11267 ScafM SNP 0037.scaffold00140 826339 1 G C scaffold11267 ScafM SNP 0037.scaffold00140 826443 1 A T scaffold11267 ScafM SNP 0037.scaffold00140 826448 1 G A scaffold11267 ScafM SNP 0037.scaffold00140 826496 1 C A scaffold11267 ScafM SNP 0037.scaffold00140 826515 1 G A scaffold11267 ScafM INDEL 0037.scaffold00140 826516 1 . A scaffold11267 ScafM SNP 0037.scaffold00140 826560 1 C T scaffold11267 ScafM SNP 0037.scaffold00140 826562 1 A T scaffold11267 Both SNP 0037.scaffold00140 826626 1 T C scaffold11267 ScafM SNP 0037.scaffold00140 826686 1 A G scaffold11267 Both SNP 0037.scaffold00140 826733 1 A G scaffold11267 ReadM SNP 0037.scaffold00140 826754 1 T C - ScafM SNP 0037.scaffold00140 826960 1 G T scaffold11267 Both SNP 0037.scaffold00140 826970 1 C T scaffold11267 ScafM SNP 0037.scaffold00140 827036 1 G A scaffold11267 ScafM SNP 0037.scaffold00140 827051 1 T C scaffold11267 Both SNP 0037.scaffold00140 827087 1 T G scaffold11267 ScafM INDEL 0037.scaffold00140 827187 1 T . scaffold11267 ScafM SNP 0037.scaffold00140 827210 1 G A scaffold11267 ScafM SNP 0037.scaffold00140 827258 1 G A scaffold11267 ScafM SNP 0037.scaffold00140 827264 1 T A scaffold11267 ScafM SNP 0037.scaffold00140 827300 1 G T scaffold11267 ScafM SNP 0037.scaffold00140 827350 1 C T scaffold11267 ScafM INDEL 0037.scaffold00140 827370 7 ....... ACTCATG scaffold11267 ScafM INDEL 0037.scaffold00140 827403 30 .............................. CTATCATGAGAGTGAGAGGGAAGACTGGGG scaffold11267 ScafM INDEL 0037.scaffold00140 827431 1 T . scaffold11267 ScafM SNP 0037.scaffold00140 827475 1 G C scaffold11267 ScafM SNP 0037.scaffold00140 827501 1 C G scaffold11267 ScafM SNP 0037.scaffold00140 827511 1 C G scaffold11267 ScafM SNP 0037.scaffold00140 828071 1 T A scaffold350 ScafM SNP 0037.scaffold00140 828073 1 C A scaffold350 ScafM SNP 0037.scaffold00140 828294 1 C G scaffold350 ScafM SNP 0037.scaffold00140 828296 1 G A scaffold350 ScafM SNP 0037.scaffold00140 828304 1 T C scaffold350 ScafM SNP 0037.scaffold00140 828374 1 A T scaffold350 ScafM SNP 0037.scaffold00140 828390 1 C T scaffold350 ScafM SNP 0037.scaffold00140 828484 1 G T scaffold350 ScafM SNP 0037.scaffold00140 828492 1 T G scaffold350 ScafM SNP 0037.scaffold00140 839808 1 C T scaffold350 ScafM SNP 0037.scaffold00140 839877 1 T G scaffold350 ScafM SNP 0037.scaffold00140 839885 1 C T scaffold350 ScafM INDEL 0037.scaffold00140 839897 2 AA .. scaffold350 ScafM INDEL 0037.scaffold00140 839906 1 A . scaffold350 ScafM SNP 0037.scaffold00140 839919 1 G T scaffold350 ScafM SNP 0037.scaffold00140 839931 1 T A scaffold350 ScafM SNP 0037.scaffold00140 840036 1 C T scaffold350 ScafM SNP 0037.scaffold00140 840043 1 A T scaffold350 ScafM SNP 0037.scaffold00140 840047 1 A G scaffold350 ScafM SNP 0037.scaffold00140 840145 1 G A scaffold350 ScafM SNP 0037.scaffold00140 840167 1 C T scaffold350 ScafM SNP 0037.scaffold00140 840211 1 A C scaffold350 ScafM SNP 0037.scaffold00140 840227 1 C G scaffold350 ScafM SNP 0037.scaffold00140 841702 1 C A scaffold4078 ScafM INDEL 0037.scaffold00140 841714 1 G . scaffold4078 ScafM SNP 0037.scaffold00140 841750 1 C T scaffold4078 ScafM SNP 0037.scaffold00140 841775 2 TT GA scaffold4078 ScafM INDEL 0037.scaffold00140 841777 1 . T scaffold4078 ScafM INDEL 0037.scaffold00140 841780 1 G . scaffold4078 ScafM SNP 0037.scaffold00140 841783 1 A G scaffold4078 ScafM SNP 0037.scaffold00140 841827 1 C G scaffold4078 ScafM SNP 0037.scaffold00140 841860 1 T C scaffold4078 ScafM SNP 0037.scaffold00140 841872 1 T G scaffold4078 ScafM INDEL 0037.scaffold00140 841879 1 A . scaffold4078 ScafM SNP 0037.scaffold00140 841890 1 G T scaffold4078 ScafM SNP 0037.scaffold00140 841906 1 T C scaffold4078 ScafM SNP 0037.scaffold00140 841916 1 A T scaffold4078 ScafM SNP 0037.scaffold00140 841923 1 T A scaffold4078 ScafM SNP 0037.scaffold00140 841927 1 G A scaffold4078 ScafM SNP 0037.scaffold00140 841944 1 A T scaffold4078 ScafM SNP 0037.scaffold00140 841969 1 G A scaffold4078 ScafM SNP 0037.scaffold00140 841986 1 A C scaffold4078 ScafM SNP 0037.scaffold00140 848460 1 C T scaffold7458 ScafM SNP 0037.scaffold00140 848479 1 T G scaffold7458 ScafM SNP 0037.scaffold00140 848518 1 A G scaffold7458 ScafM INDEL 0037.scaffold00140 848544 2 .. AT scaffold7458 ScafM SNP 0037.scaffold00140 856623 1 C T scaffold10892 ScafM SNP 0037.scaffold00140 856626 1 T G scaffold10892 ScafM SNP 0037.scaffold00140 856645 1 A C scaffold10892 ScafM SNP 0037.scaffold00140 856648 1 A G scaffold10892 ScafM SNP 0037.scaffold00140 856673 1 C T scaffold10892 ScafM SNP 0037.scaffold00140 856677 1 A G scaffold10892 ScafM SNP 0037.scaffold00140 856684 1 G A scaffold10892 ScafM SNP 0037.scaffold00140 856760 1 C T scaffold10892 ScafM SNP 0037.scaffold00140 856779 2 CG TA scaffold10892 ScafM INDEL 0037.scaffold00140 856787 1 . T scaffold10892 ScafM SNP 0037.scaffold00140 856792 1 C A scaffold10892 ScafM SNP 0037.scaffold00140 856794 1 A C scaffold10892 ScafM SNP 0037.scaffold00140 856831 1 A T scaffold10892 ScafM SNP 0037.scaffold00140 856834 1 A G scaffold10892 ScafM SNP 0037.scaffold00140 856837 1 T G scaffold10892 ScafM SNP 0037.scaffold00140 856843 1 C T scaffold10892 ScafM SNP 0037.scaffold00140 856866 1 C T scaffold10892 ScafM SNP 0037.scaffold00140 856886 1 A G scaffold10892 ScafM SNP 0037.scaffold00140 856902 1 A C scaffold10892 ScafM SNP 0037.scaffold00140 856907 1 A C scaffold10892 ScafM SNP 0037.scaffold00140 856917 1 G A scaffold10892 ScafM SNP 0037.scaffold00140 856949 1 A C scaffold10892 ScafM INDEL 0037.scaffold00140 856954 1 G . scaffold10892 ScafM SNP 0037.scaffold00140 856968 1 A C scaffold10892 ScafM SNP 0037.scaffold00140 857018 1 T C scaffold10892 ScafM SNP 0037.scaffold00140 857056 1 A G scaffold10892 ScafM INDEL 0037.scaffold00140 857063 1 . G scaffold10892 ScafM SNP 0037.scaffold00140 857072 1 A C scaffold10892 ScafM INDEL 0037.scaffold00140 857077 1 . T scaffold10892 ScafM SNP 0037.scaffold00140 857100 1 A G scaffold10892 ScafM SNP 0037.scaffold00140 857110 2 AC CT scaffold10892 ScafM SNP 0037.scaffold00140 857117 1 T G scaffold10892 ScafM SNP 0037.scaffold00140 857131 1 C A scaffold10892 ScafM SNP 0037.scaffold00140 857246 1 C G scaffold4973 ScafM SNP 0037.scaffold00140 857262 1 T C scaffold4973 ScafM SNP 0037.scaffold00140 857663 1 T A scaffold4973 ScafM SNP 0037.scaffold00140 857718 1 G A scaffold4973 ScafM SNP 0037.scaffold00140 857769 1 A T scaffold4973 ScafM SNP 0037.scaffold00140 857784 1 T A scaffold4973 ScafM INDEL 0037.scaffold00140 857845 7 CAGAAAA ....... scaffold4973 ScafM SNP 0037.scaffold00140 857853 1 C T scaffold4973 ScafM INDEL 0037.scaffold00140 857855 2 CT .. scaffold4973 ReadM SNP 0037.scaffold00140 857991 1 T C - ReadM SNP 0037.scaffold00140 858092 1 G A - ReadM SNP 0037.scaffold00140 858866 1 A C - ReadM SNP 0037.scaffold00140 858885 1 C T - ReadM SNP 0037.scaffold00140 859325 1 T C - ReadM SNP 0037.scaffold00140 859630 1 T C - ReadM SNP 0037.scaffold00140 859668 1 C T - ReadM SNP 0037.scaffold00140 859906 1 G A - ReadM SNP 0037.scaffold00140 860180 1 T G - ReadM SNP 0037.scaffold00140 860252 1 T C - ReadM SNP 0037.scaffold00140 860435 1 C G - ReadM SNP 0037.scaffold00140 860494 1 G T - ScafM SNP 0037.scaffold00140 860833 1 C G scaffold4973 ScafM SNP 0037.scaffold00140 860852 1 T G scaffold4973 ScafM SNP 0037.scaffold00140 860860 1 A G scaffold4973 ScafM SNP 0037.scaffold00140 860943 1 C T scaffold4973 ScafM SNP 0037.scaffold00140 863660 1 T C scaffold4973 ScafM SNP 0037.scaffold00140 863666 1 C T scaffold4973 ScafM SNP 0037.scaffold00140 863679 1 G A scaffold4973 ScafM SNP 0037.scaffold00140 863681 1 T A scaffold4973 ScafM INDEL 0037.scaffold00140 863725 1 T . scaffold4973 ScafM SNP 0037.scaffold00140 863991 1 A T scaffold4973 ScafM SNP 0037.scaffold00140 864338 1 A T scaffold4973 ScafM SNP 0037.scaffold00140 864372 1 T A scaffold4973 ScafM SNP 0037.scaffold00140 864381 1 G A scaffold4973 ScafM INDEL 0037.scaffold00140 865290 1 A . scaffold4973 ScafM SNP 0037.scaffold00140 865340 1 G A scaffold4973 ScafM SNP 0037.scaffold00140 865375 1 T G scaffold4973 ScafM INDEL 0037.scaffold00140 865396 11 ........... AATAGGCGATA scaffold4973 ScafM SNP 0037.scaffold00140 865450 1 G A scaffold4973 ScafM SNP 0037.scaffold00140 865490 1 C G scaffold4973 ScafM SNP 0037.scaffold00140 865521 1 G A scaffold4973 Both SNP 0037.scaffold00140 865747 1 T C scaffold4973 ScafM SNP 0037.scaffold00140 865815 2 GT TA scaffold4973 Both SNP 0037.scaffold00140 865840 1 A C scaffold4973 Both SNP 0037.scaffold00140 865852 1 C T scaffold4973 Both SNP 0037.scaffold00140 865869 1 G C scaffold4973 ScafM SNP 0037.scaffold00140 865945 1 A T scaffold4973 Both SNP 0037.scaffold00140 865965 1 C G scaffold4973 ScafM SNP 0037.scaffold00140 866013 1 T A scaffold4973 Both SNP 0037.scaffold00140 866022 1 C T scaffold4973 ScafM SNP 0037.scaffold00140 866071 1 T C scaffold4973 ReadM SNP 0037.scaffold00140 872941 1 G T - ReadM SNP 0037.scaffold00140 872958 1 C T - ScafM SNP 0037.scaffold00140 874389 1 G T scaffold8491 ScafM SNP 0037.scaffold00140 874403 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 874431 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 874464 1 T A scaffold8491 ScafM SNP 0037.scaffold00140 874466 1 A G scaffold8491 ScafM INDEL 0037.scaffold00140 874469 1 A . scaffold8491 ScafM INDEL 0037.scaffold00140 874478 3 ... AAG scaffold8491 ScafM INDEL 0037.scaffold00140 874479 1 . A scaffold8491 ScafM INDEL 0037.scaffold00140 874481 1 . A scaffold8491 ScafM SNP 0037.scaffold00140 874491 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 874544 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 874547 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 874566 1 G A scaffold8491 ScafM INDEL 0037.scaffold00140 874630 3 ... TAT scaffold8491 ScafM SNP 0037.scaffold00140 874668 1 A T scaffold8491 Both INDEL 0037.scaffold00140 874674 1 T . scaffold8491 Both SNP 0037.scaffold00140 874709 1 G T scaffold8491 ScafM SNP 0037.scaffold00140 874781 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 874784 1 G C scaffold8491 ScafM INDEL 0037.scaffold00140 874803 1 . A scaffold8491 ScafM SNP 0037.scaffold00140 874818 1 T A scaffold8491 ScafM INDEL 0037.scaffold00140 874840 4 ATTA ...G scaffold8491 ScafM SNP 0037.scaffold00140 874845 1 G T scaffold8491 ScafM SNP 0037.scaffold00140 874897 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 874906 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 874936 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 874938 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 874952 1 G T scaffold8491 ScafM INDEL 0037.scaffold00140 874957 6 ...... TCTTTA scaffold8491 ScafM SNP 0037.scaffold00140 874960 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 874970 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 874981 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 875000 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 875033 1 A T scaffold8491 ScafM INDEL 0037.scaffold00140 875056 1 T . scaffold8491 ScafM SNP 0037.scaffold00140 875078 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 875102 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 875109 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 875118 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 875129 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 875132 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 875153 1 T A scaffold8491 ScafM INDEL 0037.scaffold00140 875181 4 TTTT ...G scaffold8491 ScafM SNP 0037.scaffold00140 875191 1 T G scaffold8491 ScafM INDEL 0037.scaffold00140 875198 1 A . scaffold8491 ScafM SNP 0037.scaffold00140 875230 1 T G scaffold8491 ScafM SNP 0037.scaffold00140 875232 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 875254 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 875304 1 C T scaffold8491 ScafM INDEL 0037.scaffold00140 875311 2 TT .. scaffold8491 ScafM SNP 0037.scaffold00140 875315 1 T A scaffold8491 ScafM INDEL 0037.scaffold00140 875356 1 . T scaffold8491 ScafM SNP 0037.scaffold00140 875361 2 GC AG scaffold8491 ScafM SNP 0037.scaffold00140 876564 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 876580 1 C A scaffold8491 ScafM SNP 0037.scaffold00140 876619 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 877030 1 G C scaffold8491 ScafM SNP 0037.scaffold00140 877092 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 877094 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 877107 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 877125 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 877137 1 C A scaffold8491 ScafM SNP 0037.scaffold00140 877139 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 877147 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 877166 1 A T scaffold8491 ScafM SNP 0037.scaffold00140 877182 2 CA TG scaffold8491 ScafM SNP 0037.scaffold00140 877199 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 877219 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 877229 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 877240 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 877248 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 877259 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 877264 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 878982 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 878985 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 878989 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 878991 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 878995 1 C A scaffold8491 ScafM SNP 0037.scaffold00140 879025 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 879031 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 879081 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 879110 1 G C scaffold8491 ScafM SNP 0037.scaffold00140 879117 1 C A scaffold8491 ScafM SNP 0037.scaffold00140 879130 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 879149 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 879167 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 879208 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 879218 2 TT CG scaffold8491 ScafM SNP 0037.scaffold00140 879233 1 T A scaffold8491 ScafM SNP 0037.scaffold00140 879239 1 A T scaffold8491 ScafM SNP 0037.scaffold00140 879243 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 879247 2 CG TA scaffold8491 ScafM SNP 0037.scaffold00140 879261 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 879305 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 879309 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 880991 1 A T scaffold8491 ScafM SNP 0037.scaffold00140 880995 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 881028 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 881030 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 881069 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 881090 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 881106 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 881113 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 881137 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 881331 2 AG GA scaffold8491 ScafM SNP 0037.scaffold00140 881347 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 881387 1 A G scaffold8491 ScafM INDEL 0037.scaffold00140 881396 5 ..... AAGCT scaffold8491 ScafM INDEL 0037.scaffold00140 881432 4 .... AAAA scaffold8491 Both INDEL 0037.scaffold00140 881515 1 A . scaffold8491 Both SNP 0037.scaffold00140 881530 1 A C scaffold8491 Both SNP 0037.scaffold00140 881606 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 881660 1 G T scaffold8491 ScafM SNP 0037.scaffold00140 881679 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 881681 1 T G scaffold8491 ScafM SNP 0037.scaffold00140 881702 1 T C scaffold8491 Both SNP 0037.scaffold00140 881973 1 G C scaffold8491 Both SNP 0037.scaffold00140 881980 1 T G scaffold8491 Both SNP 0037.scaffold00140 882174 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 882219 1 G A scaffold8491 ScafM INDEL 0037.scaffold00140 882224 20 CAGAGAAGACATTTGTTAGA .................... scaffold8491 ScafM SNP 0037.scaffold00140 882278 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 882301 1 A T scaffold8491 ScafM SNP 0037.scaffold00140 882436 1 T C scaffold8491 ReadM SNP 0037.scaffold00140 882624 1 C T - ScafM SNP 0037.scaffold00140 882794 1 T A scaffold8491 ScafM SNP 0037.scaffold00140 882805 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 882938 1 C G scaffold8491 ScafM SNP 0037.scaffold00140 882980 1 T C scaffold8491 ScafM INDEL 0037.scaffold00140 883009 3 ... AAA scaffold8491 ScafM SNP 0037.scaffold00140 883061 1 T C scaffold8491 ScafM SNP 0037.scaffold00140 883073 1 C T scaffold8491 ScafM INDEL 0037.scaffold00140 883091 1 A . scaffold8491 ScafM SNP 0037.scaffold00140 883094 1 C G scaffold8491 ScafM SNP 0037.scaffold00140 883127 1 C A scaffold8491 ScafM SNP 0037.scaffold00140 883149 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 883161 1 C T scaffold8491 ReadM SNP 0037.scaffold00140 883979 1 G C - ReadM SNP 0037.scaffold00140 884014 1 A G - ReadM SNP 0037.scaffold00140 884144 1 T C - ReadM SNP 0037.scaffold00140 884202 1 T A - ReadM SNP 0037.scaffold00140 884259 1 C A - ReadM SNP 0037.scaffold00140 884281 1 A T - ReadM SNP 0037.scaffold00140 884324 1 T G - ReadM SNP 0037.scaffold00140 884326 1 A G - ReadM SNP 0037.scaffold00140 884797 1 C G - ReadM SNP 0037.scaffold00140 884822 1 C T - ReadM SNP 0037.scaffold00140 884915 1 C T - ReadM SNP 0037.scaffold00140 885014 1 G T - ReadM SNP 0037.scaffold00140 885058 1 C T - ReadM SNP 0037.scaffold00140 885133 1 C T - ReadM SNP 0037.scaffold00140 885192 1 G C - ReadM SNP 0037.scaffold00140 885197 1 T C - ReadM INDEL 0037.scaffold00140 885376 1 G . - ReadM SNP 0037.scaffold00140 885467 1 A G - ReadM SNP 0037.scaffold00140 885555 1 A G - ReadM SNP 0037.scaffold00140 885617 1 C T - ReadM SNP 0037.scaffold00140 885859 1 G A - ReadM SNP 0037.scaffold00140 886074 1 T G - ReadM SNP 0037.scaffold00140 886094 1 G A - ReadM SNP 0037.scaffold00140 886107 1 G A - ReadM SNP 0037.scaffold00140 886206 1 A C - ReadM SNP 0037.scaffold00140 886243 1 A T - ReadM SNP 0037.scaffold00140 886348 1 A G - Both SNP 0037.scaffold00140 886719 1 A G scaffold8491 ReadM SNP 0037.scaffold00140 886823 1 T G - ReadM SNP 0037.scaffold00140 887021 1 G A - ReadM SNP 0037.scaffold00140 887024 1 C A - Both SNP 0037.scaffold00140 887046 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 887088 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 887110 1 T G scaffold8491 ScafM SNP 0037.scaffold00140 887112 1 G T scaffold8491 ScafM INDEL 0037.scaffold00140 887117 1 . T scaffold8491 Both INDEL 0037.scaffold00140 887141 1 T . scaffold8491 Both SNP 0037.scaffold00140 887325 1 A T scaffold8491 Both SNP 0037.scaffold00140 887374 1 G A scaffold8491 Both SNP 0037.scaffold00140 887513 1 C A scaffold8491 Both SNP 0037.scaffold00140 887618 1 C T scaffold8491 Both SNP 0037.scaffold00140 887678 1 A C scaffold8491 Both SNP 0037.scaffold00140 887799 1 G A scaffold8491 Both SNP 0037.scaffold00140 887806 1 C T scaffold8491 Both SNP 0037.scaffold00140 887834 1 G C scaffold8491 Both SNP 0037.scaffold00140 887890 1 T C scaffold8491 Both SNP 0037.scaffold00140 887895 1 G T scaffold8491 Both SNP 0037.scaffold00140 888062 1 T G scaffold8491 Both SNP 0037.scaffold00140 888096 1 G A scaffold8491 Both SNP 0037.scaffold00140 888126 1 T A scaffold8491 Both SNP 0037.scaffold00140 888154 1 G A scaffold8491 ReadM SNP 0037.scaffold00140 888563 1 G A - ReadM SNP 0037.scaffold00140 888568 1 G C - ReadM SNP 0037.scaffold00140 888625 1 C T - ReadM SNP 0037.scaffold00140 888635 1 C A - Both SNP 0037.scaffold00140 888713 1 A G scaffold8491 Both SNP 0037.scaffold00140 888932 1 A C scaffold8491 Both SNP 0037.scaffold00140 889007 1 G T scaffold8491 Both SNP 0037.scaffold00140 889028 1 C G scaffold8491 Both SNP 0037.scaffold00140 889041 1 T G scaffold8491 Both SNP 0037.scaffold00140 889064 1 T C scaffold8491 Both SNP 0037.scaffold00140 889163 1 G A scaffold8491 Both SNP 0037.scaffold00140 889170 1 C G scaffold8491 Both SNP 0037.scaffold00140 889191 1 C T scaffold8491 Both SNP 0037.scaffold00140 889221 1 C T scaffold8491 Both INDEL 0037.scaffold00140 889258 1 . A scaffold8491 Both SNP 0037.scaffold00140 889300 1 T G scaffold8491 ReadM SNP 0037.scaffold00140 889361 1 A G - ReadM SNP 0037.scaffold00140 889397 1 T A - ReadM SNP 0037.scaffold00140 889417 1 G T - ReadM SNP 0037.scaffold00140 889517 1 A T - ReadM SNP 0037.scaffold00140 889522 1 G C - ScafM SNP 0037.scaffold00140 889941 1 A G scaffold8491 ReadM INDEL 0037.scaffold00140 889990 2 GG .. - ReadM SNP 0037.scaffold00140 890052 1 G T - ReadM SNP 0037.scaffold00140 890131 1 A T - ReadM SNP 0037.scaffold00140 890168 1 T C - ReadM SNP 0037.scaffold00140 890251 1 C T - ReadM SNP 0037.scaffold00140 890483 1 A C - ReadM SNP 0037.scaffold00140 890551 1 T C - ReadM SNP 0037.scaffold00140 890581 1 T C - Both SNP 0037.scaffold00140 890716 1 T G scaffold8491 Both SNP 0037.scaffold00140 890738 1 C A scaffold8491 Both SNP 0037.scaffold00140 890774 1 G A scaffold8491 Both SNP 0037.scaffold00140 890847 1 G A scaffold8491 Both SNP 0037.scaffold00140 890942 1 A T scaffold8491 Both SNP 0037.scaffold00140 890973 1 T C scaffold8491 Both SNP 0037.scaffold00140 890991 1 G A scaffold8491 ScafM SNP 0037.scaffold00140 891060 2 CT TC scaffold8491 ReadM SNP 0037.scaffold00140 891169 1 G A - ReadM SNP 0037.scaffold00140 891192 1 C T - ReadM SNP 0037.scaffold00140 891209 1 G T - ReadM SNP 0037.scaffold00140 891253 1 T C - ReadM SNP 0037.scaffold00140 891268 1 T C - Both SNP 0037.scaffold00140 891302 1 A C scaffold8491 Both SNP 0037.scaffold00140 891329 1 T G scaffold8491 Both SNP 0037.scaffold00140 891394 1 C A scaffold8491 ReadM SNP 0037.scaffold00140 891540 1 T C - ReadM SNP 0037.scaffold00140 891542 1 A G - ReadM SNP 0037.scaffold00140 891562 1 C T - ReadM SNP 0037.scaffold00140 891615 1 T C - ReadM SNP 0037.scaffold00140 891683 1 A G - ReadM SNP 0037.scaffold00140 891699 1 G C - Both SNP 0037.scaffold00140 891723 1 G T scaffold8491 Both SNP 0037.scaffold00140 891863 1 C T scaffold8491 Both SNP 0037.scaffold00140 891932 1 T A scaffold8491 ScafM INDEL 0037.scaffold00140 891952 3 ATC ... scaffold8491 ScafM SNP 0037.scaffold00140 891971 2 TA GG scaffold8491 Both SNP 0037.scaffold00140 892056 1 T G scaffold8491 Both SNP 0037.scaffold00140 892069 1 C T scaffold8491 Both SNP 0037.scaffold00140 892130 1 A G scaffold8491 ScafM SNP 0037.scaffold00140 892159 1 G C scaffold8491 ScafM SNP 0037.scaffold00140 892210 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 893051 1 T C scaffold8491 ScafM INDEL 0037.scaffold00140 893065 1 T . scaffold8491 ScafM SNP 0037.scaffold00140 893212 1 T C scaffold8491 ScafM INDEL 0037.scaffold00140 893245 2 .. TT scaffold8491 ScafM INDEL 0037.scaffold00140 893251 4 .... GTTG scaffold8491 ScafM SNP 0037.scaffold00140 893340 1 A C scaffold8491 ScafM SNP 0037.scaffold00140 893519 1 G A scaffold8491 Both SNP 0037.scaffold00140 893527 1 G C scaffold8491 Both SNP 0037.scaffold00140 893530 1 A C scaffold8491 Both SNP 0037.scaffold00140 893954 1 T G scaffold8491 ReadM SNP 0037.scaffold00140 893992 1 G A - ReadM SNP 0037.scaffold00140 894004 1 A T - ReadM SNP 0037.scaffold00140 894171 1 A G - ReadM SNP 0037.scaffold00140 894297 1 G A - ReadM SNP 0037.scaffold00140 894330 1 A C - ReadM SNP 0037.scaffold00140 894337 1 T C - ReadM SNP 0037.scaffold00140 894345 1 G A - ScafM INDEL 0037.scaffold00140 894447 10 GAGGGGGGGG .......... scaffold8491 Both SNP 0037.scaffold00140 894512 1 G C scaffold8491 Both SNP 0037.scaffold00140 894528 1 C T scaffold8491 Both SNP 0037.scaffold00140 894598 1 C T scaffold8491 Both SNP 0037.scaffold00140 894796 1 T C scaffold8491 Both INDEL 0037.scaffold00140 894801 1 T . scaffold8491 ScafM SNP 0037.scaffold00140 894844 1 C G scaffold8491 Both SNP 0037.scaffold00140 894946 1 A C scaffold8491 Both SNP 0037.scaffold00140 895001 1 G T scaffold8491 Both SNP 0037.scaffold00140 895009 1 C T scaffold8491 ScafM INDEL 0037.scaffold00140 895061 13 ............. AGAGAATTCAAAC scaffold8491 ScafM INDEL 0037.scaffold00140 895064 4 .... CATA scaffold8491 ScafM INDEL 0037.scaffold00140 895067 6 ...... TTCTCA scaffold8491 ScafM INDEL 0037.scaffold00140 895068 2 .. TC scaffold8491 ScafM SNP 0037.scaffold00140 895083 1 C A scaffold8491 ScafM INDEL 0037.scaffold00140 895090 2 .. CA scaffold8491 ScafM SNP 0037.scaffold00140 895093 1 T A scaffold8491 ScafM SNP 0037.scaffold00140 895108 1 T C scaffold8491 Both SNP 0037.scaffold00140 895176 1 T A scaffold8491 Both SNP 0037.scaffold00140 895178 1 C G scaffold8491 Both SNP 0037.scaffold00140 895249 1 T C scaffold8491 Both INDEL 0037.scaffold00140 895253 2 .. CT scaffold8491 ScafM INDEL 0037.scaffold00140 895341 3 TGT ... scaffold8491 ScafM SNP 0037.scaffold00140 895346 1 A T scaffold8491 ScafM SNP 0037.scaffold00140 895405 1 C T scaffold8491 ScafM SNP 0037.scaffold00140 895440 1 A G scaffold8491 ScafM INDEL 0037.scaffold00140 895448 1 A . scaffold8491 ScafM INDEL 0037.scaffold00140 895471 1 C . scaffold8491 ReadM SNP 0037.scaffold00140 895607 1 C T - ReadM SNP 0037.scaffold00140 895654 1 G A - ReadM SNP 0037.scaffold00140 895850 1 G A - ReadM SNP 0037.scaffold00140 895886 1 T C - ReadM SNP 0037.scaffold00140 895947 1 C T - ReadM SNP 0037.scaffold00140 895982 1 T C - ReadM SNP 0037.scaffold00140 896061 1 G A - ReadM SNP 0037.scaffold00140 896074 1 C A - ReadM SNP 0037.scaffold00140 896108 1 A G - ReadM SNP 0037.scaffold00140 896475 1 T C - ReadM SNP 0037.scaffold00140 896488 1 C T - ReadM SNP 0037.scaffold00140 896668 1 T G - ReadM SNP 0037.scaffold00140 896713 1 C T - ReadM SNP 0037.scaffold00140 896912 1 T C - ReadM SNP 0037.scaffold00140 896936 1 G C - ReadM SNP 0037.scaffold00140 896968 1 G A - ReadM SNP 0037.scaffold00140 897076 1 C A - ReadM SNP 0037.scaffold00140 897150 1 A G - ReadM SNP 0037.scaffold00140 897169 1 T C - ReadM INDEL 0037.scaffold00140 897193 1 A . - ReadM INDEL 0037.scaffold00140 897410 1 T . - ReadM SNP 0037.scaffold00140 897496 1 T G - ReadM SNP 0037.scaffold00140 897561 1 A G - ReadM SNP 0037.scaffold00140 897637 1 C A - ReadM SNP 0037.scaffold00140 897713 1 C T - ReadM SNP 0037.scaffold00140 897734 1 G A - ReadM SNP 0037.scaffold00140 897760 1 C G - ReadM SNP 0037.scaffold00140 897804 1 T C - ReadM SNP 0037.scaffold00140 897918 1 G A - ReadM SNP 0037.scaffold00140 898115 1 A G - ReadM SNP 0037.scaffold00140 898147 1 A C - ReadM SNP 0037.scaffold00140 898213 1 A T - ReadM SNP 0037.scaffold00140 898222 1 T C - ReadM INDEL 0037.scaffold00140 898314 1 . T - ReadM SNP 0037.scaffold00140 898354 1 G A - ReadM SNP 0037.scaffold00140 899359 1 T G - ReadM SNP 0037.scaffold00140 899384 1 T C - ReadM SNP 0037.scaffold00140 899428 1 C A - ReadM SNP 0037.scaffold00140 899473 1 C A - ReadM SNP 0037.scaffold00140 899475 1 G A - ReadM SNP 0037.scaffold00140 899524 1 C G - ReadM SNP 0037.scaffold00140 899543 1 C T - ReadM SNP 0037.scaffold00140 899565 1 A G - ReadM SNP 0037.scaffold00140 899618 1 A G - ReadM SNP 0037.scaffold00140 899776 1 A G - ReadM INDEL 0037.scaffold00140 899863 1 . C - ReadM SNP 0037.scaffold00140 899946 1 A C - ReadM SNP 0037.scaffold00140 899953 1 T C - ReadM SNP 0037.scaffold00140 899966 1 G A - ReadM SNP 0037.scaffold00140 900040 1 A T - ReadM SNP 0037.scaffold00140 900053 1 T C - ReadM SNP 0037.scaffold00140 900149 1 G A - ReadM SNP 0037.scaffold00140 900160 1 A G - ReadM SNP 0037.scaffold00140 900245 1 T C - ReadM SNP 0037.scaffold00140 900424 1 T G - ReadM SNP 0037.scaffold00140 900479 1 C A - ReadM SNP 0037.scaffold00140 900487 1 A G - ReadM SNP 0037.scaffold00140 900622 1 T C - ReadM SNP 0037.scaffold00140 900625 1 A G - ReadM SNP 0037.scaffold00140 900654 1 A G - ReadM SNP 0037.scaffold00140 900952 1 A G - ReadM SNP 0037.scaffold00140 901049 1 T C - ReadM SNP 0037.scaffold00140 901058 1 T C - ReadM SNP 0037.scaffold00140 901247 1 T G - ReadM SNP 0037.scaffold00140 901250 1 T C - ReadM SNP 0037.scaffold00140 901256 1 A T - ReadM SNP 0037.scaffold00140 901356 1 T C - ReadM SNP 0037.scaffold00140 901374 1 G A - ReadM SNP 0037.scaffold00140 901430 1 G A - ReadM SNP 0037.scaffold00140 901451 1 C T - ReadM SNP 0037.scaffold00140 901524 1 G T - ReadM SNP 0037.scaffold00140 901690 1 C T - ReadM SNP 0037.scaffold00140 901814 1 A G - ReadM SNP 0037.scaffold00140 901843 1 C G - ReadM SNP 0037.scaffold00140 901850 1 T A - ReadM SNP 0037.scaffold00140 901908 1 T C - ReadM SNP 0037.scaffold00140 901931 1 G A - ReadM SNP 0037.scaffold00140 901938 1 G C - ReadM SNP 0037.scaffold00140 902071 1 C T - ReadM SNP 0037.scaffold00140 902093 1 C A - ReadM SNP 0037.scaffold00140 902105 1 G A - ReadM SNP 0037.scaffold00140 902116 1 A C - ReadM SNP 0037.scaffold00140 902186 1 C T - ReadM SNP 0037.scaffold00140 902204 1 C T - ReadM SNP 0037.scaffold00140 902245 1 A C - ReadM SNP 0037.scaffold00140 902286 1 A T - ReadM SNP 0037.scaffold00140 902313 1 G A - ReadM SNP 0037.scaffold00140 902332 1 A T - ReadM SNP 0037.scaffold00140 902418 1 G A - ReadM SNP 0037.scaffold00140 902459 1 T A - ReadM SNP 0037.scaffold00140 902515 1 T C - ReadM SNP 0037.scaffold00140 902556 1 A G - ReadM SNP 0037.scaffold00140 902562 1 T A - ReadM SNP 0037.scaffold00140 902589 1 C T - ReadM SNP 0037.scaffold00140 902723 1 G A - ReadM SNP 0037.scaffold00140 902761 1 T A - ReadM SNP 0037.scaffold00140 903044 1 T C - ReadM SNP 0037.scaffold00140 903080 1 T C - ScafM SNP 0037.scaffold00140 903172 1 T A scaffold28926 ScafM SNP 0037.scaffold00140 903175 1 A G scaffold28926 ScafM SNP 0037.scaffold00140 903180 1 T C scaffold28926 ScafM SNP 0037.scaffold00140 903195 1 A C scaffold28926 ScafM SNP 0037.scaffold00140 903200 1 T A scaffold28926 ScafM SNP 0037.scaffold00140 903204 1 T C scaffold28926 Both SNP 0037.scaffold00140 903258 1 A G scaffold28926 ScafM SNP 0037.scaffold00140 903317 1 T C scaffold28926 ReadM SNP 0037.scaffold00140 903366 1 G T - ReadM SNP 0037.scaffold00140 903437 1 A G - ReadM SNP 0037.scaffold00140 903522 1 A G - ReadM SNP 0037.scaffold00140 903586 1 C T - ReadM SNP 0037.scaffold00140 903620 1 C G - ReadM SNP 0037.scaffold00140 903627 1 G A - ReadM SNP 0037.scaffold00140 903904 1 C T - ReadM SNP 0037.scaffold00140 904020 1 A G - ReadM SNP 0037.scaffold00140 904068 1 A G - ReadM SNP 0037.scaffold00140 904151 1 A G - ReadM SNP 0037.scaffold00140 904515 1 C T - ReadM SNP 0037.scaffold00140 904562 1 C T - ReadM SNP 0037.scaffold00140 904647 1 G A - ReadM SNP 0037.scaffold00140 904708 1 C T - ReadM SNP 0037.scaffold00140 904790 1 T C - ScafM SNP 0037.scaffold00140 915127 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 915257 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 915368 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 915377 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 915421 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 915423 1 C T scaffold1408 Both SNP 0037.scaffold00140 915447 1 C T scaffold1408 Both SNP 0037.scaffold00140 915527 1 T C scaffold1408 Both SNP 0037.scaffold00140 915534 1 T C scaffold1408 Both SNP 0037.scaffold00140 915575 1 C A scaffold1408 Both SNP 0037.scaffold00140 915579 1 G C scaffold1408 Both SNP 0037.scaffold00140 915713 1 A G scaffold1408 Both SNP 0037.scaffold00140 915855 1 G A scaffold1408 Both SNP 0037.scaffold00140 915889 1 G A scaffold1408 Both SNP 0037.scaffold00140 915911 1 G A scaffold1408 Both SNP 0037.scaffold00140 916012 1 C T scaffold1408 Both SNP 0037.scaffold00140 916044 1 A G scaffold1408 Both SNP 0037.scaffold00140 916050 1 T G scaffold1408 Both SNP 0037.scaffold00140 916157 1 A C scaffold1408 Both SNP 0037.scaffold00140 916159 1 G A scaffold1408 Both SNP 0037.scaffold00140 916194 1 C T scaffold1408 Both SNP 0037.scaffold00140 916335 1 T A scaffold1408 Both SNP 0037.scaffold00140 916352 1 T C scaffold1408 ReadM SNP 0037.scaffold00140 916389 1 G T - Both SNP 0037.scaffold00140 916489 1 G A scaffold1408 Both SNP 0037.scaffold00140 916503 1 C A scaffold1408 ReadM SNP 0037.scaffold00140 916587 1 T G - ReadM SNP 0037.scaffold00140 916712 1 G A - ReadM SNP 0037.scaffold00140 916772 1 T C - ReadM SNP 0037.scaffold00140 916823 1 A T - ReadM SNP 0037.scaffold00140 916887 1 A T - ReadM SNP 0037.scaffold00140 916952 1 T A - ReadM SNP 0037.scaffold00140 916969 1 T G - ReadM SNP 0037.scaffold00140 917021 1 C T - ReadM SNP 0037.scaffold00140 917052 1 C T - ReadM SNP 0037.scaffold00140 917160 1 A T - ReadM SNP 0037.scaffold00140 917163 1 C T - ReadM SNP 0037.scaffold00140 917221 1 C T - ReadM SNP 0037.scaffold00140 917271 1 G A - ReadM SNP 0037.scaffold00140 917476 1 C T - ReadM SNP 0037.scaffold00140 917689 1 A T - ReadM SNP 0037.scaffold00140 917744 1 T G - ReadM SNP 0037.scaffold00140 917862 1 A C - ReadM SNP 0037.scaffold00140 917946 1 G C - ReadM INDEL 0037.scaffold00140 918016 1 . G - ReadM SNP 0037.scaffold00140 918075 1 G A - ReadM SNP 0037.scaffold00140 918211 1 C T - ReadM SNP 0037.scaffold00140 918310 1 G A - ReadM SNP 0037.scaffold00140 918315 1 A G - ReadM SNP 0037.scaffold00140 918357 1 C T - ReadM SNP 0037.scaffold00140 918384 1 A G - ReadM SNP 0037.scaffold00140 918437 1 A G - Both SNP 0037.scaffold00140 918473 1 G T scaffold1408 Both SNP 0037.scaffold00140 918508 1 G C scaffold1408 Both SNP 0037.scaffold00140 918540 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 918565 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 918580 1 G A scaffold1408 ReadM SNP 0037.scaffold00140 918688 1 C T - ReadM SNP 0037.scaffold00140 918719 1 A C - ReadM SNP 0037.scaffold00140 918788 1 T G - ReadM SNP 0037.scaffold00140 918841 1 A G - ReadM SNP 0037.scaffold00140 918865 1 G A - ReadM SNP 0037.scaffold00140 918989 1 G C - ReadM SNP 0037.scaffold00140 919054 1 A G - ReadM SNP 0037.scaffold00140 919190 1 T C - ReadM SNP 0037.scaffold00140 919343 1 G C - Both SNP 0037.scaffold00140 919474 1 C A scaffold1408 Both SNP 0037.scaffold00140 919576 1 G C scaffold1408 Both SNP 0037.scaffold00140 919596 1 A G scaffold1408 Both SNP 0037.scaffold00140 919615 1 G T scaffold1408 Both SNP 0037.scaffold00140 919630 1 C T scaffold1408 Both SNP 0037.scaffold00140 919665 1 T C scaffold1408 Both SNP 0037.scaffold00140 919813 1 C T scaffold1408 Both SNP 0037.scaffold00140 919819 1 A T scaffold1408 Both SNP 0037.scaffold00140 919825 1 A C scaffold1408 Both SNP 0037.scaffold00140 919889 1 A G scaffold1408 Both SNP 0037.scaffold00140 919913 1 C T scaffold1408 Both SNP 0037.scaffold00140 919981 1 A G scaffold1408 Both SNP 0037.scaffold00140 920021 1 A C scaffold1408 Both SNP 0037.scaffold00140 920082 1 G A scaffold1408 ReadM SNP 0037.scaffold00140 920216 1 T C - ReadM INDEL 0037.scaffold00140 920325 1 . T - ReadM SNP 0037.scaffold00140 920352 1 G T - ReadM SNP 0037.scaffold00140 920428 1 T C - Both SNP 0037.scaffold00140 920649 1 T G scaffold1408 ReadM SNP 0037.scaffold00140 920739 1 A G - ReadM SNP 0037.scaffold00140 920774 1 A C - ReadM SNP 0037.scaffold00140 920820 1 A G - Both SNP 0037.scaffold00140 920948 1 T A scaffold1408 Both SNP 0037.scaffold00140 920974 1 C T scaffold1408 ScafM INDEL 0037.scaffold00140 921149 2 .. AA scaffold1408 Both SNP 0037.scaffold00140 921194 1 G A scaffold1408 Both SNP 0037.scaffold00140 921237 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 921285 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 921342 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 921364 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 921370 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 921394 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 921397 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 921402 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 921433 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 921436 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 921449 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 922620 1 G A scaffold1408 ScafM INDEL 0037.scaffold00140 922694 2 .. AA scaffold1408 ScafM SNP 0037.scaffold00140 922698 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 922742 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 922751 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 922754 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 922777 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 922808 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 922820 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 922826 1 A G scaffold1408 Both SNP 0037.scaffold00140 923092 1 A G scaffold1408 Both SNP 0037.scaffold00140 923097 1 A C scaffold1408 Both SNP 0037.scaffold00140 923174 1 A T scaffold1408 Both SNP 0037.scaffold00140 923211 1 G A scaffold1408 Both SNP 0037.scaffold00140 923215 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 923238 1 A G scaffold1408 ReadM SNP 0037.scaffold00140 923295 1 G T - ReadM SNP 0037.scaffold00140 923332 1 C T - ReadM SNP 0037.scaffold00140 923423 1 G C - ReadM SNP 0037.scaffold00140 923552 1 C T - ReadM SNP 0037.scaffold00140 923574 1 C T - ReadM SNP 0037.scaffold00140 923582 1 A G - ReadM SNP 0037.scaffold00140 923660 1 G A - ReadM INDEL 0037.scaffold00140 923669 1 A . - ScafM SNP 0037.scaffold00140 925656 1 C T scaffold1408 Both SNP 0037.scaffold00140 925771 1 A C scaffold1408 ReadM SNP 0037.scaffold00140 925819 1 C G - ReadM SNP 0037.scaffold00140 926178 1 T C - ReadM SNP 0037.scaffold00140 926336 1 C G - ReadM SNP 0037.scaffold00140 926371 1 T C - ReadM SNP 0037.scaffold00140 926433 1 C T - ReadM SNP 0037.scaffold00140 926620 1 C T - ReadM SNP 0037.scaffold00140 926632 1 G T - ReadM SNP 0037.scaffold00140 926689 1 T C - ReadM SNP 0037.scaffold00140 926710 1 G A - ReadM SNP 0037.scaffold00140 926860 1 G T - ReadM SNP 0037.scaffold00140 926887 1 G A - ReadM SNP 0037.scaffold00140 926903 1 A C - ReadM SNP 0037.scaffold00140 926953 1 T G - ReadM SNP 0037.scaffold00140 927010 1 C A - ReadM SNP 0037.scaffold00140 927020 1 T A - ReadM SNP 0037.scaffold00140 927110 2 GT CC - ReadM SNP 0037.scaffold00140 927116 1 T G - ReadM SNP 0037.scaffold00140 927187 1 T C - ReadM SNP 0037.scaffold00140 927190 1 T G - ReadM SNP 0037.scaffold00140 927295 1 C G - ReadM SNP 0037.scaffold00140 927349 1 A G - ReadM SNP 0037.scaffold00140 927351 1 C A - ReadM SNP 0037.scaffold00140 927411 1 T C - ReadM SNP 0037.scaffold00140 927440 1 G A - ReadM SNP 0037.scaffold00140 927541 1 G A - ReadM SNP 0037.scaffold00140 927596 1 C T - ReadM SNP 0037.scaffold00140 927697 1 C T - ReadM SNP 0037.scaffold00140 927706 1 A T - ReadM SNP 0037.scaffold00140 927773 1 G C - ReadM SNP 0037.scaffold00140 927821 1 T C - ReadM SNP 0037.scaffold00140 927825 1 T C - ReadM SNP 0037.scaffold00140 927835 1 C T - ReadM SNP 0037.scaffold00140 927899 1 C G - Both SNP 0037.scaffold00140 927940 1 T C scaffold1408 Both SNP 0037.scaffold00140 928032 1 A G scaffold1408 Both SNP 0037.scaffold00140 928041 1 T A scaffold1408 Both SNP 0037.scaffold00140 928046 1 G A scaffold1408 Both SNP 0037.scaffold00140 928086 1 T C scaffold1408 Both SNP 0037.scaffold00140 928088 1 T A scaffold1408 Both SNP 0037.scaffold00140 928105 1 G T scaffold1408 Both SNP 0037.scaffold00140 928168 1 C G scaffold1408 Both SNP 0037.scaffold00140 928188 1 T G scaffold1408 Both SNP 0037.scaffold00140 928225 1 T G scaffold1408 ScafM SNP 0037.scaffold00140 928241 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 928276 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 928282 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 928303 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 928305 1 A C scaffold1408 ScafM INDEL 0037.scaffold00140 928332 30 .............................. CCTTCGAGTACGCTATGTCATGCCTCGGGT scaffold1408 Both SNP 0037.scaffold00140 928386 1 T C scaffold1408 Both SNP 0037.scaffold00140 928390 1 C T scaffold1408 Both SNP 0037.scaffold00140 928440 1 G C scaffold1408 Both SNP 0037.scaffold00140 928475 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 928492 1 C G scaffold1408 ScafM SNP 0037.scaffold00140 928496 1 G A scaffold1408 Both SNP 0037.scaffold00140 928526 1 G A scaffold1408 Both SNP 0037.scaffold00140 928531 1 T C scaffold1408 Both SNP 0037.scaffold00140 928676 1 G A scaffold1408 Both SNP 0037.scaffold00140 928692 2 GG AT scaffold1408 Both SNP 0037.scaffold00140 928737 1 T C scaffold1408 Both SNP 0037.scaffold00140 928842 1 T A scaffold1408 Both SNP 0037.scaffold00140 928953 1 A G scaffold1408 Both SNP 0037.scaffold00140 929013 1 C T scaffold1408 Both SNP 0037.scaffold00140 929071 1 T C scaffold1408 Both SNP 0037.scaffold00140 929080 1 G A scaffold1408 Both SNP 0037.scaffold00140 929182 1 A G scaffold1408 Both SNP 0037.scaffold00140 929250 1 C T scaffold1408 Both SNP 0037.scaffold00140 929364 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 929383 1 C G scaffold1408 ScafM INDEL 0037.scaffold00140 929385 2 GA .C scaffold1408 ScafM INDEL 0037.scaffold00140 929392 1 T . scaffold1408 Both SNP 0037.scaffold00140 929404 1 G A scaffold1408 Both SNP 0037.scaffold00140 929464 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 929499 1 C G scaffold1408 ScafM SNP 0037.scaffold00140 929501 2 CG AT scaffold1408 Both SNP 0037.scaffold00140 929528 1 A C scaffold1408 Both SNP 0037.scaffold00140 929631 1 T G scaffold1408 Both SNP 0037.scaffold00140 929705 1 T A scaffold1408 Both SNP 0037.scaffold00140 929723 1 A C scaffold1408 Both SNP 0037.scaffold00140 929802 1 C T scaffold1408 Both SNP 0037.scaffold00140 929810 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 929995 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 930022 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 931336 1 C G scaffold1408 ScafM SNP 0037.scaffold00140 931353 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 931366 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 931405 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 931424 1 T G scaffold1408 Both SNP 0037.scaffold00140 931447 1 T C scaffold1408 Both SNP 0037.scaffold00140 931470 1 T C scaffold1408 Both SNP 0037.scaffold00140 931497 1 T C scaffold1408 Both SNP 0037.scaffold00140 931539 1 C T scaffold1408 Both SNP 0037.scaffold00140 931606 1 A G scaffold1408 Both SNP 0037.scaffold00140 931639 1 G T scaffold1408 ReadM SNP 0037.scaffold00140 931689 1 A T - ReadM SNP 0037.scaffold00140 931756 1 C T - Both SNP 0037.scaffold00140 931795 1 A T scaffold1408 Both SNP 0037.scaffold00140 931892 1 C T scaffold1408 Both SNP 0037.scaffold00140 931950 1 T C scaffold1408 Both SNP 0037.scaffold00140 931998 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 932177 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 932179 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 932189 1 A T scaffold1408 Both SNP 0037.scaffold00140 932207 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 932362 1 A T scaffold1408 Both SNP 0037.scaffold00140 932419 1 A C scaffold1408 Both SNP 0037.scaffold00140 932437 1 C T scaffold1408 Both SNP 0037.scaffold00140 932483 2 TA CG scaffold1408 Both SNP 0037.scaffold00140 932668 1 C T scaffold1408 Both SNP 0037.scaffold00140 932838 1 G A scaffold1408 Both SNP 0037.scaffold00140 932854 1 A G scaffold1408 Both SNP 0037.scaffold00140 932952 1 A T scaffold1408 Both SNP 0037.scaffold00140 932980 1 T C scaffold1408 Both SNP 0037.scaffold00140 932984 1 G A scaffold1408 Both SNP 0037.scaffold00140 932989 1 A C scaffold1408 Both SNP 0037.scaffold00140 933083 1 C T scaffold1408 Both INDEL 0037.scaffold00140 933098 1 . A scaffold1408 ScafM SNP 0037.scaffold00140 933142 1 A G scaffold1408 Both SNP 0037.scaffold00140 933155 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 933180 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 933182 1 C G scaffold1408 Both SNP 0037.scaffold00140 933391 1 A T scaffold1408 Both SNP 0037.scaffold00140 933517 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 933701 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 933715 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 933749 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 933812 1 G C scaffold1408 ScafM SNP 0037.scaffold00140 933918 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 933994 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 934018 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 934296 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 934540 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 934548 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 934569 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 934576 1 A G scaffold1408 Both SNP 0037.scaffold00140 934606 1 G A scaffold1408 Both SNP 0037.scaffold00140 934651 1 A T scaffold1408 ReadM SNP 0037.scaffold00140 934686 1 G A - ReadM SNP 0037.scaffold00140 934868 1 C T - ReadM SNP 0037.scaffold00140 934914 1 A G - ReadM SNP 0037.scaffold00140 934967 1 T G - ReadM SNP 0037.scaffold00140 935152 1 T G - ReadM SNP 0037.scaffold00140 935288 1 A G - ReadM SNP 0037.scaffold00140 935399 1 A G - ReadM SNP 0037.scaffold00140 935469 1 G C - ReadM SNP 0037.scaffold00140 935521 1 T C - ReadM SNP 0037.scaffold00140 935529 1 C G - ReadM SNP 0037.scaffold00140 935589 1 C G - ReadM INDEL 0037.scaffold00140 935776 1 . A - ReadM SNP 0037.scaffold00140 935828 1 A G - ReadM SNP 0037.scaffold00140 935926 1 T C - ReadM SNP 0037.scaffold00140 936038 1 C T - Both SNP 0037.scaffold00140 936110 1 G T scaffold1408 Both SNP 0037.scaffold00140 936169 1 A G scaffold1408 ScafM INDEL 0037.scaffold00140 936216 1 . A scaffold1408 Both INDEL 0037.scaffold00140 936250 1 T . scaffold1408 Both SNP 0037.scaffold00140 936302 1 T C scaffold1408 Both SNP 0037.scaffold00140 936323 1 T C scaffold1408 Both SNP 0037.scaffold00140 936360 1 C T scaffold1408 ScafM INDEL 0037.scaffold00140 936413 6 ...... AAAAAC scaffold1408 Both SNP 0037.scaffold00140 936429 1 C A scaffold1408 Both SNP 0037.scaffold00140 936607 1 A G scaffold1408 Both SNP 0037.scaffold00140 936631 1 G A scaffold1408 Both SNP 0037.scaffold00140 936813 1 G T scaffold1408 Both SNP 0037.scaffold00140 936846 1 A G scaffold1408 Both SNP 0037.scaffold00140 936896 1 G T scaffold1408 Both SNP 0037.scaffold00140 936909 1 C A scaffold1408 Both SNP 0037.scaffold00140 936959 1 A G scaffold1408 ScafM INDEL 0037.scaffold00140 937025 2 CA .. scaffold1408 ScafM SNP 0037.scaffold00140 937031 1 C T scaffold1408 Both SNP 0037.scaffold00140 937048 1 G C scaffold1408 Both SNP 0037.scaffold00140 937124 1 C A scaffold1408 Both SNP 0037.scaffold00140 937146 1 A T scaffold1408 Both SNP 0037.scaffold00140 937177 1 T C scaffold1408 Both SNP 0037.scaffold00140 937187 1 G A scaffold1408 Both SNP 0037.scaffold00140 937222 1 G A scaffold1408 Both SNP 0037.scaffold00140 937340 1 A C scaffold1408 Both SNP 0037.scaffold00140 937405 1 G A scaffold1408 Both SNP 0037.scaffold00140 937495 1 T G scaffold1408 Both SNP 0037.scaffold00140 937559 1 G A scaffold1408 Both SNP 0037.scaffold00140 937601 1 G A scaffold1408 Both SNP 0037.scaffold00140 937688 1 A T scaffold1408 Both SNP 0037.scaffold00140 937712 1 G C scaffold1408 Both INDEL 0037.scaffold00140 937721 1 C . scaffold1408 Both SNP 0037.scaffold00140 937916 1 C G scaffold1408 Both SNP 0037.scaffold00140 937941 1 C T scaffold1408 Both SNP 0037.scaffold00140 938005 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 938064 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 938097 1 A G scaffold1408 ReadM SNP 0037.scaffold00140 938844 1 C A - ReadM SNP 0037.scaffold00140 938897 1 T C - ReadM SNP 0037.scaffold00140 939237 1 A G - ReadM SNP 0037.scaffold00140 939269 1 G C - ScafM SNP 0037.scaffold00140 939306 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 939311 2 TT AC scaffold1408 ScafM SNP 0037.scaffold00140 939335 1 G A scaffold1408 Both SNP 0037.scaffold00140 939524 1 C G scaffold1408 Both SNP 0037.scaffold00140 939568 1 C T scaffold1408 Both SNP 0037.scaffold00140 939571 1 A T scaffold1408 Both SNP 0037.scaffold00140 939610 1 G A scaffold1408 Both SNP 0037.scaffold00140 939612 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 939714 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 939726 2 AT GA scaffold1408 ScafM SNP 0037.scaffold00140 939731 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 939735 1 A C scaffold1408 Both SNP 0037.scaffold00140 939818 1 G T scaffold1408 Both SNP 0037.scaffold00140 939892 1 C T scaffold1408 Both SNP 0037.scaffold00140 939931 1 G A scaffold1408 Both SNP 0037.scaffold00140 939944 1 T C scaffold1408 Both SNP 0037.scaffold00140 940040 1 T C scaffold1408 Both SNP 0037.scaffold00140 940061 1 C T scaffold1408 Both SNP 0037.scaffold00140 940069 1 T G scaffold1408 Both SNP 0037.scaffold00140 940128 1 T A scaffold1408 ReadM SNP 0037.scaffold00140 940650 1 A G - ReadM SNP 0037.scaffold00140 940684 1 A T - ScafM SNP 0037.scaffold00140 940750 1 T C scaffold1408 ScafM INDEL 0037.scaffold00140 940825 1 T . scaffold1408 ScafM SNP 0037.scaffold00140 940829 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 940845 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 940862 1 C T scaffold1408 Both SNP 0037.scaffold00140 940937 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 941033 1 G A scaffold1408 ReadM SNP 0037.scaffold00140 941140 1 T C - ReadM SNP 0037.scaffold00140 941158 1 A C - ReadM SNP 0037.scaffold00140 941634 1 T G - ReadM SNP 0037.scaffold00140 941748 1 G A - ReadM SNP 0037.scaffold00140 941783 1 T C - ReadM SNP 0037.scaffold00140 941804 1 A G - ReadM SNP 0037.scaffold00140 941838 1 A G - ReadM SNP 0037.scaffold00140 941951 1 C T - ReadM SNP 0037.scaffold00140 941965 1 A C - ReadM SNP 0037.scaffold00140 942053 1 T C - ReadM SNP 0037.scaffold00140 942502 1 G A - ReadM SNP 0037.scaffold00140 942540 1 G A - ReadM SNP 0037.scaffold00140 942561 1 T C - ReadM SNP 0037.scaffold00140 942661 1 C G - ReadM SNP 0037.scaffold00140 942861 1 G A - ReadM SNP 0037.scaffold00140 942932 1 A G - ReadM SNP 0037.scaffold00140 943027 1 G C - ScafM SNP 0037.scaffold00140 953940 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 953950 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 953967 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 953981 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 954094 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 954177 2 CT AG scaffold1408 ScafM SNP 0037.scaffold00140 954186 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 954433 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 954443 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 954446 1 C G scaffold21835 ScafM SNP 0037.scaffold00140 954452 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 954465 1 T A scaffold21835 ScafM SNP 0037.scaffold00140 954469 1 G C scaffold21835 ScafM SNP 0037.scaffold00140 954474 1 A T scaffold21835 ScafM SNP 0037.scaffold00140 954479 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 954503 1 A T scaffold21835 ScafM SNP 0037.scaffold00140 954572 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 954589 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 954605 1 G T scaffold21835 ScafM SNP 0037.scaffold00140 954626 1 G C scaffold21835 ScafM SNP 0037.scaffold00140 954639 1 A T scaffold21835 ScafM SNP 0037.scaffold00140 954661 2 TA GG scaffold21835 ScafM SNP 0037.scaffold00140 954702 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 954704 1 A T scaffold21835 ScafM SNP 0037.scaffold00140 954723 1 C G scaffold21835 ScafM SNP 0037.scaffold00140 954768 1 C A scaffold21835 ScafM SNP 0037.scaffold00140 954810 1 T A scaffold21835 ScafM SNP 0037.scaffold00140 954841 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 954865 1 A C scaffold21835 ScafM SNP 0037.scaffold00140 954904 1 C G scaffold21835 ScafM SNP 0037.scaffold00140 954938 1 T G scaffold21835 ScafM SNP 0037.scaffold00140 954966 1 T C scaffold21835 ScafM INDEL 0037.scaffold00140 955006 1 A . scaffold21835 ScafM SNP 0037.scaffold00140 955044 1 T C scaffold21835 ScafM INDEL 0037.scaffold00140 955118 3 GGC ... scaffold21835 ScafM INDEL 0037.scaffold00140 955124 5 GGCAC ..... scaffold21835 ScafM SNP 0037.scaffold00140 955146 1 C A scaffold21835 ScafM SNP 0037.scaffold00140 955150 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 955950 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 955962 1 G C scaffold21835 ScafM SNP 0037.scaffold00140 955977 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 955995 1 T C scaffold21835 ScafM INDEL 0037.scaffold00140 956024 4 TTTA .... scaffold21835 ScafM SNP 0037.scaffold00140 956052 1 C A scaffold21835 ScafM SNP 0037.scaffold00140 956058 1 C T scaffold21835 ScafM SNP 0037.scaffold00140 956068 1 A T scaffold21835 ScafM SNP 0037.scaffold00140 956081 1 A G scaffold21835 ScafM SNP 0037.scaffold00140 956086 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 956092 1 A G scaffold21835 ScafM SNP 0037.scaffold00140 956113 1 A G scaffold21835 ScafM SNP 0037.scaffold00140 956122 1 C T scaffold21835 ScafM SNP 0037.scaffold00140 956125 1 T A scaffold21835 ScafM SNP 0037.scaffold00140 956129 1 G T scaffold21835 ScafM SNP 0037.scaffold00140 956135 1 T C scaffold21835 ScafM INDEL 0037.scaffold00140 956147 1 . T scaffold21835 ScafM SNP 0037.scaffold00140 956165 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 956178 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 956180 1 G A scaffold21835 ScafM SNP 0037.scaffold00140 956474 1 C G scaffold8280 ScafM SNP 0037.scaffold00140 956495 1 G A scaffold8280 ScafM SNP 0037.scaffold00140 956552 1 C T scaffold8280 ScafM INDEL 0037.scaffold00140 956555 1 A . scaffold8280 ScafM SNP 0037.scaffold00140 956557 1 A C scaffold8280 ScafM SNP 0037.scaffold00140 956926 1 T C scaffold8280 ScafM SNP 0037.scaffold00140 956930 1 T C scaffold8280 ScafM SNP 0037.scaffold00140 956952 1 A C scaffold8280 ScafM SNP 0037.scaffold00140 956975 1 T C scaffold8280 ScafM SNP 0037.scaffold00140 957012 1 A G scaffold8280 ScafM SNP 0037.scaffold00140 957029 1 A G scaffold8280 ScafM SNP 0037.scaffold00140 957069 1 G T scaffold8280 ScafM SNP 0037.scaffold00140 957076 1 T C scaffold8280 ScafM SNP 0037.scaffold00140 957089 1 C T scaffold8280 ScafM SNP 0037.scaffold00140 957361 1 A G scaffold1698 ReadM SNP 0037.scaffold00140 959099 1 T A - ReadM SNP 0037.scaffold00140 959113 1 T G - ScafM SNP 0037.scaffold00140 962316 1 C T scaffold21835 ScafM SNP 0037.scaffold00140 962319 1 C A scaffold21835 ScafM SNP 0037.scaffold00140 962329 1 T C scaffold21835 ScafM INDEL 0037.scaffold00140 962340 3 AAG ... scaffold21835 ScafM SNP 0037.scaffold00140 962346 1 G C scaffold21835 ScafM SNP 0037.scaffold00140 962350 1 A C scaffold21835 ScafM SNP 0037.scaffold00140 962416 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 962419 1 A G scaffold21835 ScafM SNP 0037.scaffold00140 962422 2 TG CT scaffold21835 ScafM SNP 0037.scaffold00140 962450 2 TT CA scaffold21835 ScafM SNP 0037.scaffold00140 962487 1 A C scaffold21835 ScafM SNP 0037.scaffold00140 962500 1 A G scaffold21835 ScafM SNP 0037.scaffold00140 962504 1 T C scaffold21835 ScafM SNP 0037.scaffold00140 964663 1 G C scaffold2593 ScafM SNP 0037.scaffold00140 964680 1 G A scaffold2593 ScafM SNP 0037.scaffold00140 964714 1 A G scaffold2593 ScafM SNP 0037.scaffold00140 964726 1 T G scaffold2593 ScafM SNP 0037.scaffold00140 964728 1 T A scaffold2593 ScafM SNP 0037.scaffold00140 964736 1 A G scaffold2593 ScafM INDEL 0037.scaffold00140 964744 3 AAA ... scaffold2593 ScafM SNP 0037.scaffold00140 964769 1 G T scaffold2593 ScafM SNP 0037.scaffold00140 964775 1 C A scaffold2593 ScafM INDEL 0037.scaffold00140 964787 1 A . scaffold2593 ScafM SNP 0037.scaffold00140 964795 2 AA GG scaffold2593 ScafM SNP 0037.scaffold00140 964807 1 G C scaffold2593 ScafM SNP 0037.scaffold00140 964817 1 C G scaffold2593 ScafM SNP 0037.scaffold00140 964822 1 G A scaffold2593 ScafM SNP 0037.scaffold00140 964828 1 C G scaffold2593 ScafM SNP 0037.scaffold00140 964838 1 G C scaffold2593 ScafM SNP 0037.scaffold00140 964857 1 T C scaffold2593 ScafM SNP 0037.scaffold00140 964870 1 T C scaffold2593 ScafM SNP 0037.scaffold00140 964877 1 C T scaffold2593 ScafM SNP 0037.scaffold00140 964884 1 G A scaffold2593 ScafM SNP 0037.scaffold00140 964901 1 G A scaffold2593 ScafM INDEL 0037.scaffold00140 968156 1 . C scaffold14874 ScafM SNP 0037.scaffold00140 968158 1 A C scaffold14874 ScafM SNP 0037.scaffold00140 968163 1 A G scaffold14874 ScafM SNP 0037.scaffold00140 968165 2 AA TG scaffold14874 ScafM SNP 0037.scaffold00140 968182 1 T G scaffold14874 ScafM SNP 0037.scaffold00140 968192 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 968199 1 A G scaffold14874 ScafM INDEL 0037.scaffold00140 968207 1 . C scaffold14874 ScafM SNP 0037.scaffold00140 968246 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 968251 1 G A scaffold14874 ScafM INDEL 0037.scaffold00140 968258 1 . T scaffold14874 ScafM SNP 0037.scaffold00140 968332 1 G T scaffold14874 ReadM SNP 0037.scaffold00140 968728 1 T C - ReadM SNP 0037.scaffold00140 968753 1 G A - ReadM SNP 0037.scaffold00140 968813 1 T C - ScafM SNP 0037.scaffold00140 969044 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 969062 1 T C scaffold14874 ScafM SNP 0037.scaffold00140 969078 1 G A scaffold14874 ScafM INDEL 0037.scaffold00140 969091 1 A . scaffold14874 ScafM SNP 0037.scaffold00140 969133 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 969160 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 969165 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 969201 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 969207 1 T C scaffold14874 ScafM SNP 0037.scaffold00140 969223 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 969228 1 A G scaffold14874 ScafM INDEL 0037.scaffold00140 969234 3 AAT ... scaffold14874 ScafM SNP 0037.scaffold00140 970184 1 G A scaffold1408 Both SNP 0037.scaffold00140 970413 1 C T scaffold1408 Both SNP 0037.scaffold00140 970433 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 970466 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 970468 1 T A scaffold1408 Both SNP 0037.scaffold00140 970689 1 G A scaffold1408 Both INDEL 0037.scaffold00140 970705 1 C . scaffold1408 ScafM SNP 0037.scaffold00140 970780 1 T C scaffold1408 Both SNP 0037.scaffold00140 970909 1 A G scaffold1408 Both SNP 0037.scaffold00140 971018 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 971331 1 A G scaffold1408 ScafM INDEL 0037.scaffold00140 971469 1 . A scaffold1408 Both SNP 0037.scaffold00140 971484 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 971490 1 G T scaffold1408 Both SNP 0037.scaffold00140 971548 1 A T scaffold1408 Both SNP 0037.scaffold00140 971622 1 A G scaffold1408 ScafM INDEL 0037.scaffold00140 971692 3 ..A TTT scaffold1408 Both SNP 0037.scaffold00140 971756 1 T C scaffold1408 Both SNP 0037.scaffold00140 971828 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 971858 1 A G scaffold1408 Both SNP 0037.scaffold00140 971984 1 T G scaffold1408 Both SNP 0037.scaffold00140 972004 1 A T scaffold1408 Both SNP 0037.scaffold00140 972049 1 C T scaffold1408 Both SNP 0037.scaffold00140 972065 1 A T scaffold1408 Both SNP 0037.scaffold00140 972114 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 972397 1 A T scaffold1408 Both SNP 0037.scaffold00140 972795 1 T C scaffold1408 Both INDEL 0037.scaffold00140 972816 1 . T scaffold1408 Both SNP 0037.scaffold00140 972840 1 G C scaffold1408 ScafM SNP 0037.scaffold00140 972979 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 973076 2 CC GT scaffold1408 ScafM INDEL 0037.scaffold00140 973152 8 CAGAAATC ........ scaffold1408 ScafM INDEL 0037.scaffold00140 973203 3 GAG ... scaffold1408 ScafM SNP 0037.scaffold00140 973719 1 T G scaffold1408 ScafM SNP 0037.scaffold00140 973758 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 973917 1 A G scaffold1408 Both SNP 0037.scaffold00140 974128 1 A T scaffold1408 Both SNP 0037.scaffold00140 974136 1 C A scaffold1408 Both SNP 0037.scaffold00140 974192 1 A C scaffold1408 Both SNP 0037.scaffold00140 974231 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 974741 1 G T scaffold1408 Both SNP 0037.scaffold00140 974997 1 T C scaffold1408 Both SNP 0037.scaffold00140 975005 1 T C scaffold1408 Both SNP 0037.scaffold00140 975008 1 T C scaffold1408 ReadM SNP 0037.scaffold00140 975278 1 T A - ReadM SNP 0037.scaffold00140 975366 1 A T - ReadM INDEL 0037.scaffold00140 975763 1 . T - ReadM SNP 0037.scaffold00140 976216 1 A G - ReadM INDEL 0037.scaffold00140 976229 1 . A - Both SNP 0037.scaffold00140 976405 1 T C scaffold1408 ReadM SNP 0037.scaffold00140 976533 1 C T - ReadM SNP 0037.scaffold00140 976564 1 C T - ReadM SNP 0037.scaffold00140 976671 1 T C - ReadM SNP 0037.scaffold00140 976704 1 T G - ReadM SNP 0037.scaffold00140 976834 1 C T - ReadM SNP 0037.scaffold00140 976859 1 G A - ReadM SNP 0037.scaffold00140 976974 1 G A - ReadM SNP 0037.scaffold00140 976982 1 A G - ReadM SNP 0037.scaffold00140 977213 1 A G - ReadM SNP 0037.scaffold00140 977216 1 C T - ReadM SNP 0037.scaffold00140 977471 1 G C - Both SNP 0037.scaffold00140 977520 1 G A scaffold1408 ReadM SNP 0037.scaffold00140 977737 1 G A - ReadM SNP 0037.scaffold00140 977827 1 G C - ReadM SNP 0037.scaffold00140 977918 1 G C - ReadM SNP 0037.scaffold00140 978060 2 GG AA - ReadM SNP 0037.scaffold00140 978071 1 G A - Both SNP 0037.scaffold00140 978172 1 T C scaffold1408 Both SNP 0037.scaffold00140 978199 1 A G scaffold1408 Both SNP 0037.scaffold00140 978246 1 T G scaffold1408 Both SNP 0037.scaffold00140 978284 1 A G scaffold1408 Both SNP 0037.scaffold00140 978337 1 C T scaffold1408 ReadM SNP 0037.scaffold00140 978595 1 C A - ReadM SNP 0037.scaffold00140 978695 1 G A - ReadM SNP 0037.scaffold00140 978710 1 A G - ReadM SNP 0037.scaffold00140 978714 1 G A - ReadM SNP 0037.scaffold00140 978788 1 G T - ReadM SNP 0037.scaffold00140 978948 1 C T - ReadM SNP 0037.scaffold00140 979061 1 A G - ReadM SNP 0037.scaffold00140 979129 1 T C - ReadM SNP 0037.scaffold00140 979155 1 T C - ReadM SNP 0037.scaffold00140 979212 1 C T - ReadM SNP 0037.scaffold00140 979252 1 T C - ReadM SNP 0037.scaffold00140 979340 1 C T - ReadM SNP 0037.scaffold00140 979398 1 G C - ReadM SNP 0037.scaffold00140 979456 1 G A - ReadM SNP 0037.scaffold00140 979513 1 G A - ReadM SNP 0037.scaffold00140 979526 1 A G - ReadM SNP 0037.scaffold00140 979565 1 T A - ReadM SNP 0037.scaffold00140 979633 1 T C - Both SNP 0037.scaffold00140 979747 1 A G scaffold1408 Both SNP 0037.scaffold00140 979879 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 979931 1 T G scaffold1408 ScafM INDEL 0037.scaffold00140 979939 2 GA .T scaffold1408 ScafM SNP 0037.scaffold00140 979948 1 G T scaffold1408 ScafM SNP 0037.scaffold00140 980071 1 G C scaffold1408 ScafM SNP 0037.scaffold00140 980090 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 980093 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 980095 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 980147 2 CC TT scaffold1408 Both SNP 0037.scaffold00140 980188 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 980273 1 A C scaffold1408 ScafM SNP 0037.scaffold00140 980287 1 T A scaffold1408 ScafM INDEL 0037.scaffold00140 980297 3 CAC ... scaffold1408 ScafM INDEL 0037.scaffold00140 980336 1 A . scaffold1408 ScafM SNP 0037.scaffold00140 980363 1 T A scaffold1408 ScafM INDEL 0037.scaffold00140 980365 1 . A scaffold1408 ReadM SNP 0037.scaffold00140 980507 1 G T - ReadM SNP 0037.scaffold00140 980526 1 G C - ReadM SNP 0037.scaffold00140 980566 1 T C - ReadM SNP 0037.scaffold00140 980716 1 T C - ReadM SNP 0037.scaffold00140 980729 1 C T - ReadM SNP 0037.scaffold00140 980861 1 G A - ReadM SNP 0037.scaffold00140 980977 1 C A - ReadM SNP 0037.scaffold00140 981058 1 G T - ReadM SNP 0037.scaffold00140 981207 1 A G - ReadM INDEL 0037.scaffold00140 981304 1 . A - ReadM SNP 0037.scaffold00140 981316 1 T G - ReadM SNP 0037.scaffold00140 981451 1 A G - ReadM INDEL 0037.scaffold00140 981506 2 AA .. - Both INDEL 0037.scaffold00140 981547 1 . A scaffold1408 Both SNP 0037.scaffold00140 981616 1 T C scaffold1408 ReadM SNP 0037.scaffold00140 981694 1 G A - ReadM SNP 0037.scaffold00140 981744 1 T G - ReadM SNP 0037.scaffold00140 981870 1 A G - ReadM SNP 0037.scaffold00140 982056 1 T C - ReadM SNP 0037.scaffold00140 982177 1 G C - ReadM SNP 0037.scaffold00140 982467 1 A G - ReadM SNP 0037.scaffold00140 982513 1 A G - ReadM SNP 0037.scaffold00140 982603 1 A G - ReadM SNP 0037.scaffold00140 982611 1 G T - ReadM SNP 0037.scaffold00140 982631 1 C A - Both SNP 0037.scaffold00140 983024 1 T C scaffold1408 Both SNP 0037.scaffold00140 983106 1 C A scaffold1408 ScafM INDEL 0037.scaffold00140 983195 4 .... ATTC scaffold1408 ScafM SNP 0037.scaffold00140 983201 1 T C scaffold1408 Both SNP 0037.scaffold00140 983296 1 C T scaffold1408 Both SNP 0037.scaffold00140 983377 1 G C scaffold1408 Both SNP 0037.scaffold00140 983455 1 G T scaffold1408 Both SNP 0037.scaffold00140 983563 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 983722 2 CT TG scaffold1408 Both SNP 0037.scaffold00140 983734 1 G T scaffold1408 Both SNP 0037.scaffold00140 983796 1 G A scaffold1408 Both SNP 0037.scaffold00140 983799 1 T C scaffold1408 ReadM SNP 0037.scaffold00140 983887 1 C T - ReadM SNP 0037.scaffold00140 984108 1 T A - ReadM SNP 0037.scaffold00140 984181 1 T A - ReadM SNP 0037.scaffold00140 984268 1 C T - ReadM SNP 0037.scaffold00140 984658 1 T C - ScafM SNP 0037.scaffold00140 985247 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 985262 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 985314 1 A G scaffold1408 ReadM SNP 0037.scaffold00140 985952 1 T G - Both SNP 0037.scaffold00140 986126 1 C A scaffold1408 Both SNP 0037.scaffold00140 986144 1 C A scaffold1408 Both SNP 0037.scaffold00140 986339 1 A T scaffold1408 Both SNP 0037.scaffold00140 986445 1 T A scaffold1408 Both SNP 0037.scaffold00140 986449 1 G C scaffold1408 Both SNP 0037.scaffold00140 986468 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 986505 1 A T scaffold1408 Both SNP 0037.scaffold00140 986519 1 G A scaffold1408 Both SNP 0037.scaffold00140 986554 1 T C scaffold1408 Both SNP 0037.scaffold00140 986595 1 A G scaffold1408 Both INDEL 0037.scaffold00140 986604 1 A . scaffold1408 Both SNP 0037.scaffold00140 986653 1 C T scaffold1408 Both SNP 0037.scaffold00140 986673 1 T A scaffold1408 Both SNP 0037.scaffold00140 986771 1 A T scaffold1408 Both SNP 0037.scaffold00140 986912 1 T C scaffold1408 ScafM INDEL 0037.scaffold00140 986937 1 . A scaffold1408 ScafM SNP 0037.scaffold00140 986945 1 G A scaffold1408 ScafM INDEL 0037.scaffold00140 986954 3 AAA ... scaffold1408 Both SNP 0037.scaffold00140 987013 1 A G scaffold1408 Both SNP 0037.scaffold00140 987056 1 C T scaffold1408 Both SNP 0037.scaffold00140 987091 1 A G scaffold1408 Both SNP 0037.scaffold00140 987425 1 G T scaffold1408 Both SNP 0037.scaffold00140 987481 1 T C scaffold1408 Both SNP 0037.scaffold00140 987540 1 G A scaffold1408 Both SNP 0037.scaffold00140 987622 1 G A scaffold1408 Both SNP 0037.scaffold00140 987712 1 T A scaffold1408 Both SNP 0037.scaffold00140 987764 1 A G scaffold1408 Both INDEL 0037.scaffold00140 987945 1 . T scaffold1408 ScafM SNP 0037.scaffold00140 987955 1 G T scaffold1408 Both SNP 0037.scaffold00140 987975 1 T G scaffold1408 Both SNP 0037.scaffold00140 988044 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 988080 2 TA AC scaffold1408 ScafM INDEL 0037.scaffold00140 988091 1 . C scaffold1408 ScafM INDEL 0037.scaffold00140 988308 1 A . scaffold1408 ScafM SNP 0037.scaffold00140 988338 1 T A scaffold1408 ScafM SNP 0037.scaffold00140 988348 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 988359 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 988439 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 988475 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 988773 1 G A scaffold1408 ScafM INDEL 0037.scaffold00140 988781 2 TT .. scaffold1408 ScafM SNP 0037.scaffold00140 988945 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 989005 1 T C scaffold1408 ScafM INDEL 0037.scaffold00140 989057 1 . G scaffold1408 ScafM SNP 0037.scaffold00140 989102 1 C A scaffold1408 ScafM SNP 0037.scaffold00140 989141 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 989210 1 A T scaffold1408 Both INDEL 0037.scaffold00140 989295 1 . T scaffold1408 Both SNP 0037.scaffold00140 989322 1 G A scaffold1408 Both SNP 0037.scaffold00140 989362 1 T C scaffold1408 Both SNP 0037.scaffold00140 989384 1 C G scaffold1408 ScafM SNP 0037.scaffold00140 989410 1 C G scaffold1408 ScafM SNP 0037.scaffold00140 989413 1 A G scaffold1408 ScafM SNP 0037.scaffold00140 989442 1 A C scaffold1408 ScafM INDEL 0037.scaffold00140 989480 3 .TT ACA scaffold1408 ScafM SNP 0037.scaffold00140 989490 1 C T scaffold1408 ScafM SNP 0037.scaffold00140 989506 1 G A scaffold1408 ScafM SNP 0037.scaffold00140 989544 1 T C scaffold1408 ScafM SNP 0037.scaffold00140 989546 2 TG CA scaffold1408 ScafM SNP 0037.scaffold00140 989555 1 A T scaffold1408 Both SNP 0037.scaffold00140 989568 1 T C scaffold1408 Both SNP 0037.scaffold00140 989640 1 A G scaffold1408 Both SNP 0037.scaffold00140 989642 1 A T scaffold1408 ScafM SNP 0037.scaffold00140 989981 1 T C scaffold14874 ScafM SNP 0037.scaffold00140 990005 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 990012 1 T A scaffold14874 ScafM SNP 0037.scaffold00140 990018 1 T C scaffold14874 ScafM SNP 0037.scaffold00140 990094 1 A C scaffold14874 ScafM SNP 0037.scaffold00140 990113 1 A C scaffold14874 ScafM SNP 0037.scaffold00140 990122 1 T C scaffold14874 ScafM SNP 0037.scaffold00140 990128 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 990171 2 CA GC scaffold14874 ScafM SNP 0037.scaffold00140 990190 1 G T scaffold14874 ScafM SNP 0037.scaffold00140 990194 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 990209 1 A G scaffold14874 ScafM SNP 0037.scaffold00140 990228 2 CA TG scaffold14874 ScafM INDEL 0037.scaffold00140 990233 1 . A scaffold14874 ScafM INDEL 0037.scaffold00140 990258 7 ....... GAATATT scaffold14874 ScafM INDEL 0037.scaffold00140 990259 2 .. GG scaffold14874 ScafM SNP 0037.scaffold00140 990303 1 A T scaffold14874 ScafM SNP 0037.scaffold00140 990315 1 C T scaffold14874 ScafM INDEL 0037.scaffold00140 990321 9 ......... GGAGAGGGG scaffold14874 ScafM SNP 0037.scaffold00140 990328 2 AA GG scaffold14874 ScafM SNP 0037.scaffold00140 990331 1 A C scaffold14874 ScafM INDEL 0037.scaffold00140 990335 1 . T scaffold14874 ScafM SNP 0037.scaffold00140 990343 1 C A scaffold14874 ScafM SNP 0037.scaffold00140 990348 2 AA GC scaffold14874 ScafM INDEL 0037.scaffold00140 990353 1 . T scaffold14874 ScafM SNP 0037.scaffold00140 990357 1 C T scaffold14874 ScafM SNP 0037.scaffold00140 990387 1 G A scaffold14874 ScafM SNP 0037.scaffold00140 990399 1 A T scaffold14874 ScafM SNP 0037.scaffold00140 990419 1 C A scaffold14874 ScafM SNP 0037.scaffold00140 990889 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 990917 1 A T scaffold70524 ScafM SNP 0037.scaffold00140 990963 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 990985 1 A C scaffold70524 ScafM INDEL 0037.scaffold00140 991029 3 TAC ... scaffold70524 Both SNP 0037.scaffold00140 991037 1 A C scaffold70524 ScafM SNP 0037.scaffold00140 991110 1 A C scaffold70524 Both SNP 0037.scaffold00140 991136 1 C T scaffold70524 ScafM INDEL 0037.scaffold00140 991197 3 AAC ... scaffold70524 ScafM SNP 0037.scaffold00140 991211 1 C G scaffold70524 ScafM INDEL 0037.scaffold00140 991242 1 . T scaffold70524 ScafM INDEL 0037.scaffold00140 991279 1 . C scaffold70524 ScafM INDEL 0037.scaffold00140 991283 4 .... AATA scaffold70524 ScafM SNP 0037.scaffold00140 991327 1 C A scaffold70524 ScafM SNP 0037.scaffold00140 991333 1 T C scaffold70524 ScafM INDEL 0037.scaffold00140 991335 1 T . scaffold70524 ScafM SNP 0037.scaffold00140 991396 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 991401 2 CT TG scaffold70524 ScafM INDEL 0037.scaffold00140 991403 1 . G scaffold70524 ScafM SNP 0037.scaffold00140 991478 1 G A scaffold70524 ScafM INDEL 0037.scaffold00140 991480 2 .. AT scaffold70524 ScafM SNP 0037.scaffold00140 991486 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 991506 1 A T scaffold70524 ScafM SNP 0037.scaffold00140 991509 1 A C scaffold70524 ScafM SNP 0037.scaffold00140 991512 1 T A scaffold70524 ScafM INDEL 0037.scaffold00140 991533 34 TGAATAACCAGCAAATTGATACAAATAAAAGTAA .................................. scaffold70524 ScafM INDEL 0037.scaffold00140 991569 1 T . scaffold70524 Both SNP 0037.scaffold00140 991653 1 A C scaffold70524 ScafM SNP 0037.scaffold00140 991661 1 T A scaffold70524 ScafM SNP 0037.scaffold00140 991695 1 C A scaffold70524 ScafM SNP 0037.scaffold00140 991697 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 991707 1 G T scaffold70524 ScafM SNP 0037.scaffold00140 991718 1 C A scaffold70524 ScafM SNP 0037.scaffold00140 991730 1 A T scaffold70524 Both SNP 0037.scaffold00140 991763 1 T G scaffold70524 Both SNP 0037.scaffold00140 991786 1 T C scaffold70524 ScafM SNP 0037.scaffold00140 991834 1 C G scaffold70524 ScafM SNP 0037.scaffold00140 991843 1 C T scaffold70524 ScafM INDEL 0037.scaffold00140 991851 3 .AA TCT scaffold70524 ScafM SNP 0037.scaffold00140 991873 1 C G scaffold70524 ScafM SNP 0037.scaffold00140 991902 1 T C scaffold70524 Both SNP 0037.scaffold00140 991926 1 A T scaffold70524 Both SNP 0037.scaffold00140 991982 1 A C scaffold70524 Both SNP 0037.scaffold00140 991984 1 G T scaffold70524 ScafM SNP 0037.scaffold00140 992313 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 992327 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 992335 1 A G scaffold70524 ScafM SNP 0037.scaffold00140 992382 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 992395 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 992407 1 C G scaffold70524 ScafM SNP 0037.scaffold00140 992446 1 C T scaffold70524 Both SNP 0037.scaffold00140 992458 1 T C scaffold70524 Both SNP 0037.scaffold00140 992470 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 992566 1 C A scaffold70524 Both SNP 0037.scaffold00140 992584 1 G A scaffold70524 ScafM INDEL 0037.scaffold00140 992649 1 . A scaffold70524 Both SNP 0037.scaffold00140 992686 1 A C scaffold70524 Both SNP 0037.scaffold00140 992717 1 A G scaffold70524 ScafM SNP 0037.scaffold00140 992872 1 A C scaffold70524 ScafM INDEL 0037.scaffold00140 992884 2 .. GG scaffold70524 ScafM SNP 0037.scaffold00140 992889 1 A C scaffold70524 ScafM SNP 0037.scaffold00140 992917 1 A C scaffold70524 ScafM SNP 0037.scaffold00140 992923 1 A T scaffold70524 ScafM SNP 0037.scaffold00140 992933 2 CG TA scaffold70524 ScafM SNP 0037.scaffold00140 992961 1 G A scaffold70524 ScafM SNP 0037.scaffold00140 992968 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 992997 1 T G scaffold70524 Both SNP 0037.scaffold00140 993021 1 C T scaffold70524 ScafM SNP 0037.scaffold00140 993057 2 CA TG scaffold70524 ReadM SNP 0037.scaffold00140 993229 1 A G - ReadM SNP 0037.scaffold00140 993277 1 C A - ScafM SNP 0037.scaffold00140 993602 1 A G scaffold26868 ScafM SNP 0037.scaffold00140 993650 1 G A scaffold26868 ScafM INDEL 0037.scaffold00140 993720 1 . C scaffold26868 ScafM SNP 0037.scaffold00140 994022 1 G A scaffold26868 Both SNP 0037.scaffold00140 994028 1 G A scaffold26868 ScafM SNP 0037.scaffold00140 994082 1 A G scaffold26868 Both SNP 0037.scaffold00140 994144 1 G A scaffold26868 ScafM SNP 0037.scaffold00140 994220 1 A G scaffold26868 Both SNP 0037.scaffold00140 994312 1 C T scaffold26868 Both SNP 0037.scaffold00140 994886 1 A T scaffold26868 Both SNP 0037.scaffold00140 994913 1 A G scaffold26868 Both SNP 0037.scaffold00140 994925 1 T C scaffold26868 Both SNP 0037.scaffold00140 995297 1 G A scaffold26868 Both INDEL 0037.scaffold00140 995536 2 TT .. scaffold26868 ScafM SNP 0037.scaffold00140 995666 1 C A scaffold26868 Both INDEL 0037.scaffold00140 995874 2 .. GG scaffold26868 ScafM INDEL 0037.scaffold00140 995904 12 ATTGGAGAGAGA ............ scaffold26868 Both SNP 0037.scaffold00140 995947 1 T G scaffold26868 ScafM INDEL 0037.scaffold00140 996072 1 A . scaffold26868 ScafM INDEL 0037.scaffold00140 996108 1 . T scaffold26868 ReadM SNP 0037.scaffold00140 996792 1 C A - ReadM SNP 0037.scaffold00140 997101 1 C A - ReadM SNP 0037.scaffold00140 997526 1 T C - ReadM INDEL 0037.scaffold00140 997599 1 . T - ReadM INDEL 0037.scaffold00140 997681 1 T . - ReadM SNP 0037.scaffold00140 997915 1 T C - ReadM SNP 0037.scaffold00140 998132 1 T C - ReadM SNP 0037.scaffold00140 998230 1 G A - ScafM SNP 0037.scaffold00140 998538 1 T G scaffold44218 ScafM SNP 0037.scaffold00140 998688 1 A T scaffold44218 ScafM SNP 0037.scaffold00140 998690 1 G A scaffold44218 ScafM SNP 0037.scaffold00140 999024 1 C T scaffold44218 ScafM SNP 0037.scaffold00140 999127 1 C A scaffold44218 ScafM SNP 0037.scaffold00140 999132 1 G T scaffold44218 ScafM SNP 0037.scaffold00140 999276 1 G A scaffold44218 Both SNP 0037.scaffold00140 999355 1 C A scaffold44218 ScafM SNP 0037.scaffold00140 999403 1 T A scaffold44218 ScafM SNP 0037.scaffold00140 999419 1 C T scaffold44218 Both SNP 0037.scaffold00140 999457 1 A G scaffold44218 Both SNP 0037.scaffold00140 999530 1 A G scaffold44218 Both SNP 0037.scaffold00140 999533 1 A G scaffold44218 ScafM SNP 0037.scaffold00140 999583 1 G T scaffold44218 Both SNP 0037.scaffold00140 999632 1 A G scaffold44218 Both SNP 0037.scaffold00140 999713 1 T C scaffold44218 ScafM SNP 0037.scaffold00140 999776 1 C A scaffold44218 ScafM SNP 0037.scaffold00140 999826 1 G A scaffold44218 ScafM SNP 0037.scaffold00140 999841 1 G A scaffold44218 ScafM SNP 0037.scaffold00140 999860 1 G A scaffold44218 ReadM SNP 0037.scaffold00140 1001063 1 C T - ReadM SNP 0037.scaffold00140 1001068 1 A G - ReadM SNP 0037.scaffold00140 1001234 1 C T - ReadM SNP 0037.scaffold00140 1001288 1 C T - ReadM SNP 0037.scaffold00140 1001557 1 C G - ReadM SNP 0037.scaffold00140 1001648 1 C T - ReadM SNP 0037.scaffold00140 1001656 1 A G - ReadM SNP 0037.scaffold00140 1001666 1 A T - ReadM SNP 0037.scaffold00140 1001741 1 A G - ReadM SNP 0037.scaffold00140 1001771 1 T C - ReadM SNP 0037.scaffold00140 1001981 1 A G - ReadM SNP 0037.scaffold00140 1002065 1 C A - ScafM SNP 0037.scaffold00140 1002798 1 G A scaffold37435 ReadM SNP 0037.scaffold00140 1004459 1 A C - ReadM SNP 0037.scaffold00140 1004575 1 T A - ReadM SNP 0037.scaffold00140 1004607 1 G C - ReadM SNP 0037.scaffold00140 1004652 1 C T - ReadM SNP 0037.scaffold00140 1004700 1 C G - ReadM SNP 0037.scaffold00140 1004705 1 T C - ReadM SNP 0037.scaffold00140 1004939 1 C G - ReadM SNP 0037.scaffold00140 1004950 1 A C - ReadM INDEL 0037.scaffold00140 1005003 1 . C - ReadM SNP 0037.scaffold00140 1005054 1 G A - ReadM SNP 0037.scaffold00140 1005094 1 T G - ReadM SNP 0037.scaffold00140 1005335 1 T A - ReadM SNP 0037.scaffold00140 1005477 1 G A - ReadM SNP 0037.scaffold00140 1005547 1 T C - ReadM SNP 0037.scaffold00140 1005617 1 T A - ReadM SNP 0037.scaffold00140 1005730 1 C T - ReadM SNP 0037.scaffold00140 1005752 1 A C - ReadM SNP 0037.scaffold00140 1005764 1 T C - ReadM SNP 0037.scaffold00140 1005858 1 T C - ReadM SNP 0037.scaffold00140 1005883 1 T C - ReadM SNP 0037.scaffold00140 1005956 1 A G - ReadM SNP 0037.scaffold00140 1005960 1 T C - ReadM SNP 0037.scaffold00140 1006056 1 C A - ReadM SNP 0037.scaffold00140 1006060 1 T C - ReadM SNP 0037.scaffold00140 1006135 1 T G - ReadM SNP 0037.scaffold00140 1006156 1 C T - ReadM SNP 0037.scaffold00140 1006179 1 T A - ReadM SNP 0037.scaffold00140 1006343 1 G T - ReadM SNP 0037.scaffold00140 1006433 1 G T - ReadM SNP 0037.scaffold00140 1006470 1 C T - ReadM SNP 0037.scaffold00140 1006491 1 C T - ReadM SNP 0037.scaffold00140 1006611 1 T C - ReadM SNP 0037.scaffold00140 1006698 1 T C - ReadM SNP 0037.scaffold00140 1006791 1 A T - ReadM SNP 0037.scaffold00140 1006810 1 T A - ReadM SNP 0037.scaffold00140 1006902 1 T C - ReadM SNP 0037.scaffold00140 1006937 1 A T - ReadM SNP 0037.scaffold00140 1006991 1 C T - ReadM SNP 0037.scaffold00140 1007106 1 A G - ReadM SNP 0037.scaffold00140 1007125 1 C T - ReadM SNP 0037.scaffold00140 1007143 1 T C - ReadM SNP 0037.scaffold00140 1007234 1 G A - ReadM SNP 0037.scaffold00140 1007298 1 G A - ReadM SNP 0037.scaffold00140 1007315 1 C A - ScafM SNP 0037.scaffold00140 1007879 1 G T scaffold41811 ScafM SNP 0037.scaffold00140 1007893 1 C T scaffold41811 ScafM SNP 0037.scaffold00140 1007908 1 G A scaffold41811 ScafM SNP 0037.scaffold00140 1007938 1 A T scaffold41811 ScafM SNP 0037.scaffold00140 1007953 1 T C scaffold41811 ScafM SNP 0037.scaffold00140 1007959 1 T A scaffold41811 ScafM SNP 0037.scaffold00140 1008000 1 A G scaffold41811 ScafM SNP 0037.scaffold00140 1008004 1 T C scaffold41811 ScafM SNP 0037.scaffold00140 1008024 1 T A scaffold41811 ScafM SNP 0037.scaffold00140 1008055 1 A G scaffold41811 ScafM SNP 0037.scaffold00140 1008084 1 G A scaffold41811 ScafM SNP 0037.scaffold00140 1008107 1 T C scaffold41811 ScafM SNP 0037.scaffold00140 1008119 1 G A scaffold41811 ScafM SNP 0037.scaffold00140 1008142 1 T G scaffold41811 ScafM SNP 0037.scaffold00140 1008154 1 T A scaffold41811 ScafM SNP 0037.scaffold00140 1008204 1 T C scaffold41811 ScafM SNP 0037.scaffold00140 1008221 1 C T scaffold41811 ScafM SNP 0037.scaffold00140 1008270 1 G A scaffold41811 ScafM SNP 0037.scaffold00140 1008293 1 T C scaffold41811 ScafM SNP 0037.scaffold00140 1008325 1 A C scaffold41811 ScafM SNP 0037.scaffold00140 1008330 1 T A scaffold41811 ScafM SNP 0037.scaffold00140 1010552 1 C T scaffold32395 ScafM SNP 0037.scaffold00140 1010559 1 T A scaffold32395 ScafM SNP 0037.scaffold00140 1010599 1 G C scaffold32395 ScafM INDEL 0037.scaffold00140 1010620 7 AACACTG ....... scaffold32395 ScafM SNP 0037.scaffold00140 1013687 1 T G scaffold32395 ScafM SNP 0037.scaffold00140 1013695 1 T A scaffold32395 ScafM SNP 0037.scaffold00140 1013701 1 G A scaffold32395 ScafM SNP 0037.scaffold00140 1013736 1 G A scaffold32395 ScafM SNP 0037.scaffold00140 1013749 1 G T scaffold32395 ScafM SNP 0037.scaffold00140 1013756 1 A C scaffold32395 ScafM SNP 0037.scaffold00140 1013760 1 T C scaffold32395 ReadM SNP 0037.scaffold00140 1016154 1 G C - ReadM SNP 0037.scaffold00140 1016524 1 A T - ReadM SNP 0037.scaffold00140 1016635 1 T C - ReadM SNP 0037.scaffold00140 1016668 1 T C - ReadM SNP 0037.scaffold00140 1017155 1 A G - ReadM SNP 0037.scaffold00140 1017372 1 C T - ReadM SNP 0037.scaffold00140 1017525 1 T C - ReadM SNP 0037.scaffold00140 1017760 1 G C - ReadM SNP 0037.scaffold00140 1017841 1 A G - ScafM SNP 0037.scaffold00140 1018231 1 C T scaffold1492 ScafM SNP 0037.scaffold00140 1018237 1 G T scaffold1492 ScafM SNP 0037.scaffold00140 1018248 1 C T scaffold1492 ScafM SNP 0037.scaffold00140 1018254 1 G A scaffold1492 ScafM SNP 0037.scaffold00140 1018275 1 T C scaffold1492 ScafM INDEL 0037.scaffold00140 1018276 1 . T scaffold1492 ScafM SNP 0037.scaffold00140 1018278 1 A G scaffold1492 ScafM INDEL 0037.scaffold00140 1018300 4 AAAT .... scaffold1492 ScafM SNP 0037.scaffold00140 1018340 1 A G scaffold1492 ScafM SNP 0037.scaffold00140 1018343 1 G T scaffold1492 ScafM INDEL 0037.scaffold00140 1018347 4 .... AAAT scaffold1492 ScafM SNP 0037.scaffold00140 1018349 2 GG TA scaffold1492 ScafM SNP 0037.scaffold00140 1018359 1 G T scaffold1492 ScafM INDEL 0037.scaffold00140 1018361 1 . T scaffold1492 ScafM SNP 0037.scaffold00140 1018364 1 T G scaffold1492 ScafM SNP 0037.scaffold00140 1018371 1 C T scaffold1492 ScafM SNP 0037.scaffold00140 1018377 1 T A scaffold1492 ScafM SNP 0037.scaffold00140 1018386 1 T A scaffold1492 ScafM SNP 0037.scaffold00140 1018400 1 G A scaffold1492 ScafM SNP 0037.scaffold00140 1018414 1 T G scaffold1492 ScafM SNP 0037.scaffold00140 1018443 1 G A scaffold1492 ReadM SNP 0037.scaffold00140 1019767 1 A T - ReadM SNP 0037.scaffold00140 1019784 1 C T - ReadM SNP 0037.scaffold00140 1019891 1 A G - ReadM SNP 0037.scaffold00140 1020037 1 G A - ReadM SNP 0037.scaffold00140 1020083 1 A G - ReadM SNP 0037.scaffold00140 1020104 1 C T - ReadM SNP 0037.scaffold00140 1020226 1 C A - ReadM SNP 0037.scaffold00140 1020258 1 A C - ReadM SNP 0037.scaffold00140 1020290 1 T C - ReadM SNP 0037.scaffold00140 1020300 1 C A - ReadM SNP 0037.scaffold00140 1020321 1 A G - ReadM SNP 0037.scaffold00140 1020446 1 C T - ReadM SNP 0037.scaffold00140 1020556 1 G A - ReadM SNP 0037.scaffold00140 1020603 1 A G - ReadM SNP 0037.scaffold00140 1020607 1 A G - ReadM SNP 0037.scaffold00140 1020883 1 T C - ReadM SNP 0037.scaffold00140 1020974 1 T A - ReadM SNP 0037.scaffold00140 1021024 1 A G - ReadM SNP 0037.scaffold00140 1021106 1 G C - ReadM SNP 0037.scaffold00140 1021114 1 T C - ReadM SNP 0037.scaffold00140 1021205 1 A G - ReadM SNP 0037.scaffold00140 1021323 1 A T - ReadM SNP 0037.scaffold00140 1021523 1 G A - ReadM SNP 0037.scaffold00140 1021620 1 A G - ReadM SNP 0037.scaffold00140 1021669 1 T G - ReadM SNP 0037.scaffold00140 1021674 1 T C - ReadM SNP 0037.scaffold00140 1021892 1 T C - ReadM SNP 0037.scaffold00140 1022859 1 T A - ReadM INDEL 0037.scaffold00140 1023029 1 . G - ReadM SNP 0037.scaffold00140 1023038 1 A T - ReadM SNP 0037.scaffold00140 1023058 1 A G - ReadM SNP 0037.scaffold00140 1023110 1 T C - ReadM SNP 0037.scaffold00140 1023239 1 C A - ReadM SNP 0037.scaffold00140 1023376 1 T C - ReadM SNP 0037.scaffold00140 1023683 1 G A - ReadM SNP 0037.scaffold00140 1023724 1 G T - ReadM SNP 0037.scaffold00140 1023729 1 A G - ReadM SNP 0037.scaffold00140 1023762 1 T G - ReadM SNP 0037.scaffold00140 1023798 1 T C - ReadM SNP 0037.scaffold00140 1023870 1 G C - ReadM SNP 0037.scaffold00140 1023976 1 A G - ReadM SNP 0037.scaffold00140 1024011 1 T G - ReadM SNP 0037.scaffold00140 1024094 1 A G - ReadM SNP 0037.scaffold00140 1024116 1 A C - ReadM SNP 0037.scaffold00140 1024128 1 A C - ReadM SNP 0037.scaffold00140 1024193 1 A C - ReadM SNP 0037.scaffold00140 1024294 1 T C - ReadM SNP 0037.scaffold00140 1024323 1 G T - ReadM SNP 0037.scaffold00140 1024331 1 G A - ReadM SNP 0037.scaffold00140 1024406 1 T C - ReadM SNP 0037.scaffold00140 1024591 1 A G - ReadM SNP 0037.scaffold00140 1024783 1 T G - ReadM SNP 0037.scaffold00140 1024859 1 T G - ScafM INDEL 0037.scaffold00140 1024948 4 .... AGTC scaffold7091 Both SNP 0037.scaffold00140 1024969 1 C T scaffold7091 ScafM SNP 0037.scaffold00140 1024977 1 A G scaffold7091 ScafM SNP 0037.scaffold00140 1025037 1 T A scaffold7091 Both SNP 0037.scaffold00140 1025060 1 A G scaffold7091 ScafM INDEL 0037.scaffold00140 1025127 12 ACTTAAGCTCCT ............ scaffold7091 Both SNP 0037.scaffold00140 1025185 1 T A scaffold7091 Both SNP 0037.scaffold00140 1025198 1 T C scaffold7091 ReadM INDEL 0037.scaffold00140 1025255 1 . C - ReadM SNP 0037.scaffold00140 1025334 1 A T - ReadM INDEL 0037.scaffold00140 1025427 1 . G - ReadM SNP 0037.scaffold00140 1025533 1 T C - ReadM INDEL 0037.scaffold00140 1026751 1 A . - ReadM SNP 0037.scaffold00140 1026801 1 A C - ReadM SNP 0037.scaffold00140 1026818 1 A G - ReadM SNP 0037.scaffold00140 1026929 1 C G - ReadM INDEL 0037.scaffold00140 1026961 1 . T - ReadM SNP 0037.scaffold00140 1027277 1 T C - ReadM SNP 0037.scaffold00140 1027369 1 T C - ReadM INDEL 0037.scaffold00140 1027470 1 . T - ReadM SNP 0037.scaffold00140 1027548 1 C T - ReadM SNP 0037.scaffold00140 1027561 1 T C - ScafM SNP 0037.scaffold00140 1027901 1 T G scaffold52773 ScafM SNP 0037.scaffold00140 1027914 1 A G scaffold52773 ScafM SNP 0037.scaffold00140 1027923 1 G A scaffold52773 ScafM INDEL 0037.scaffold00140 1027964 7 AAAAAAA ......T scaffold52773 ReadM SNP 0037.scaffold00140 1028090 1 C G - ReadM SNP 0037.scaffold00140 1028191 1 A T - Both SNP 0037.scaffold00140 1028213 1 C T scaffold52773 ScafM SNP 0037.scaffold00140 1028255 1 G T scaffold52773 ScafM SNP 0037.scaffold00140 1028267 1 T G scaffold52773 ScafM SNP 0037.scaffold00140 1028293 1 T G scaffold52773 ScafM SNP 0037.scaffold00140 1028298 1 T A scaffold52773 ScafM INDEL 0037.scaffold00140 1028323 4 CACA ...T scaffold52773 ReadM SNP 0037.scaffold00140 1030971 1 T A - ReadM SNP 0037.scaffold00140 1031044 1 T C - ReadM SNP 0037.scaffold00140 1031049 1 A G - ReadM SNP 0037.scaffold00140 1031177 1 T C - ReadM SNP 0037.scaffold00140 1031233 1 G A - ReadM SNP 0037.scaffold00140 1031487 1 T G - ReadM SNP 0037.scaffold00140 1031611 1 C T - ReadM SNP 0037.scaffold00140 1031629 1 G A - ReadM SNP 0037.scaffold00140 1031634 1 G T - ReadM SNP 0037.scaffold00140 1031683 1 A T - ReadM SNP 0037.scaffold00140 1031915 1 A C - ReadM SNP 0037.scaffold00140 1032015 1 T C - ReadM SNP 0037.scaffold00140 1032104 1 A G - ReadM SNP 0037.scaffold00140 1032362 1 C A - ScafM SNP 0037.scaffold00140 1032424 1 A G scaffold11767 ScafM SNP 0037.scaffold00140 1032427 1 A T scaffold11767 ScafM SNP 0037.scaffold00140 1032432 1 A G scaffold11767 ScafM SNP 0037.scaffold00140 1032437 1 C G scaffold11767 ScafM SNP 0037.scaffold00140 1032443 1 A T scaffold11767 ScafM SNP 0037.scaffold00140 1032518 1 C A scaffold11767 ScafM SNP 0037.scaffold00140 1032529 1 T A scaffold11767 ScafM SNP 0037.scaffold00140 1032532 1 C T scaffold11767 ScafM SNP 0037.scaffold00140 1032534 1 A G scaffold11767 ScafM SNP 0037.scaffold00140 1032539 1 T C scaffold11767 ScafM INDEL 0037.scaffold00140 1032540 5 ..... CGAAT scaffold11767 ScafM SNP 0037.scaffold00140 1032543 1 C T scaffold11767 ScafM INDEL 0037.scaffold00140 1032547 2 .. TT scaffold11767 ScafM INDEL 0037.scaffold00140 1032548 1 . T scaffold11767 ScafM SNP 0037.scaffold00140 1032563 1 C A scaffold11767 ScafM SNP 0037.scaffold00140 1032577 1 A G scaffold11767 ScafM SNP 0037.scaffold00140 1032583 1 C T scaffold11767 ReadM SNP 0037.scaffold00140 1032621 1 A T - ReadM SNP 0037.scaffold00140 1033253 1 C T - ReadM SNP 0037.scaffold00140 1033294 1 C T - ReadM SNP 0037.scaffold00140 1033331 1 C T - ReadM SNP 0037.scaffold00140 1033549 1 C T - ReadM SNP 0037.scaffold00140 1035363 1 A G - ReadM SNP 0037.scaffold00140 1035584 1 A G - ReadM SNP 0037.scaffold00140 1035593 1 G A - ReadM SNP 0037.scaffold00140 1035650 1 A T - Both SNP 0037.scaffold00140 1035848 1 A C scaffold10269 ReadM SNP 0037.scaffold00140 1036237 1 T C - ReadM SNP 0037.scaffold00140 1036302 1 G T - ReadM INDEL 0037.scaffold00140 1037781 2 TA .. - ReadM SNP 0037.scaffold00140 1038115 1 T G - ReadM SNP 0037.scaffold00140 1038164 1 G T - ReadM SNP 0037.scaffold00140 1038166 1 G C - ReadM SNP 0037.scaffold00140 1038207 1 C T - ReadM SNP 0037.scaffold00140 1038574 1 G C - ReadM SNP 0037.scaffold00140 1038628 1 T C - ReadM SNP 0037.scaffold00140 1038732 1 C T - ReadM SNP 0037.scaffold00140 1039082 1 T G - ReadM SNP 0037.scaffold00140 1039111 1 C A - ReadM SNP 0037.scaffold00140 1039250 1 C A - ReadM SNP 0037.scaffold00140 1039301 1 G A - ReadM SNP 0037.scaffold00140 1039444 1 C T - ReadM SNP 0037.scaffold00140 1039461 1 C A - ReadM SNP 0037.scaffold00140 1039610 1 A G - ReadM SNP 0037.scaffold00140 1039691 1 A C - ReadM SNP 0037.scaffold00140 1040970 1 A C - ReadM SNP 0037.scaffold00140 1041015 1 G A - ReadM SNP 0037.scaffold00140 1041070 1 C T - ScafM SNP 0037.scaffold00140 1046251 1 C T scaffold11309 ScafM SNP 0037.scaffold00140 1046264 1 T C scaffold11309 ScafM SNP 0037.scaffold00140 1046295 1 C G scaffold11309 ScafM SNP 0037.scaffold00140 1046298 1 T C scaffold11309 ScafM SNP 0037.scaffold00140 1046361 1 T A scaffold11309 ScafM SNP 0037.scaffold00140 1046417 1 T G scaffold11309 ScafM SNP 0037.scaffold00140 1046446 1 A T scaffold11309 ScafM SNP 0037.scaffold00140 1046448 1 G A scaffold11309 ScafM SNP 0037.scaffold00140 1046629 1 G A scaffold11309 ScafM SNP 0037.scaffold00140 1046641 2 AC TT scaffold11309 ScafM SNP 0037.scaffold00140 1046645 1 T C scaffold11309 ScafM SNP 0037.scaffold00140 1046671 1 A G scaffold11309 ScafM SNP 0037.scaffold00140 1046713 1 G A scaffold11309 ScafM SNP 0037.scaffold00140 1046718 1 T C scaffold11309 ScafM SNP 0037.scaffold00140 1046816 1 G T scaffold11309 ScafM SNP 0037.scaffold00140 1046942 1 T A scaffold11309 ScafM SNP 0037.scaffold00140 1046960 1 A G scaffold11309 ScafM SNP 0037.scaffold00140 1047036 1 T A scaffold11309 ScafM SNP 0037.scaffold00140 1047045 1 A C scaffold11309 ScafM SNP 0037.scaffold00140 1047054 1 C T scaffold11309 ScafM INDEL 0037.scaffold00140 1047058 1 . C scaffold11309 ScafM SNP 0037.scaffold00140 1047061 1 A C scaffold11309 ScafM SNP 0037.scaffold00140 1047073 2 AG GA scaffold11309 ScafM SNP 0037.scaffold00140 1047083 1 A G scaffold11309 ScafM SNP 0037.scaffold00140 1047090 1 G A scaffold11309 ScafM SNP 0037.scaffold00140 1047099 1 A C scaffold11309 ScafM SNP 0037.scaffold00140 1047111 1 G A scaffold11309 ScafM SNP 0037.scaffold00140 1047260 1 G T scaffold14399 ScafM INDEL 0037.scaffold00140 1047278 6 ...... GTATTT scaffold14399 ScafM SNP 0037.scaffold00140 1047394 1 A C scaffold14399 ScafM SNP 0037.scaffold00140 1047396 1 G C scaffold14399 ScafM INDEL 0037.scaffold00140 1047398 1 T . scaffold14399 ScafM SNP 0037.scaffold00140 1047421 1 T G scaffold14399 ScafM INDEL 0037.scaffold00140 1047471 1 A . scaffold14399 ReadM SNP 0037.scaffold00140 1052444 1 G A - ReadM SNP 0037.scaffold00140 1052618 1 T C - ReadM SNP 0037.scaffold00140 1052788 1 G T - ReadM SNP 0037.scaffold00140 1052808 1 G T - ReadM SNP 0037.scaffold00140 1052833 1 G A - ReadM SNP 0037.scaffold00140 1054663 1 T G - ReadM SNP 0037.scaffold00140 1054729 1 T C - ReadM SNP 0037.scaffold00140 1054765 1 A G - ReadM INDEL 0037.scaffold00140 1054803 1 G . - ReadM SNP 0037.scaffold00140 1054915 1 C T - ReadM SNP 0037.scaffold00140 1054986 1 A G - ReadM SNP 0037.scaffold00140 1055033 1 C T - ScafM SNP 0037.scaffold00140 1055418 1 C T scaffold57001 Both SNP 0037.scaffold00140 1055480 1 C T scaffold57001 Both SNP 0037.scaffold00140 1055489 1 G A scaffold57001 ScafM SNP 0037.scaffold00140 1056013 1 T A scaffold57001 ScafM SNP 0037.scaffold00140 1056459 1 T C scaffold3197 ScafM SNP 0037.scaffold00140 1056464 1 G A scaffold3197 ReadM SNP 0037.scaffold00140 1057522 1 C T - ReadM SNP 0037.scaffold00140 1058099 1 T C - Both SNP 0037.scaffold00140 1058212 1 C T scaffold40414 ReadM SNP 0037.scaffold00140 1058229 1 T A - ReadM SNP 0037.scaffold00140 1058311 1 G T - ReadM SNP 0037.scaffold00140 1058346 1 T C - Both SNP 0037.scaffold00140 1058476 1 A G scaffold40414 Both SNP 0037.scaffold00140 1058478 1 C A scaffold40414 Both SNP 0037.scaffold00140 1058588 1 A G scaffold40414 Both SNP 0037.scaffold00140 1058604 1 G T scaffold40414 ScafM SNP 0037.scaffold00140 1058636 1 G T scaffold40414 ScafM SNP 0037.scaffold00140 1058655 1 C G scaffold40414 ScafM SNP 0037.scaffold00140 1058664 1 G A scaffold40414 Both SNP 0037.scaffold00140 1058685 1 T C scaffold40414 Both INDEL 0037.scaffold00140 1058699 1 T . scaffold40414 Both SNP 0037.scaffold00140 1058802 1 T C scaffold40414 Both SNP 0037.scaffold00140 1058818 1 T C scaffold40414 Both SNP 0037.scaffold00140 1058856 1 A G scaffold40414 ReadM SNP 0037.scaffold00140 1058933 1 C A - ReadM SNP 0037.scaffold00140 1058935 1 T G - ScafM SNP 0037.scaffold00140 1059149 1 A C scaffold40414 Both SNP 0037.scaffold00140 1059179 1 G T scaffold40414 Both SNP 0037.scaffold00140 1059263 1 A C scaffold40414 Both SNP 0037.scaffold00140 1059290 1 T G scaffold40414 Both SNP 0037.scaffold00140 1059352 1 A G scaffold40414 Both SNP 0037.scaffold00140 1059383 1 G A scaffold40414 ScafM SNP 0037.scaffold00140 1059392 2 TC CT scaffold40414 Both SNP 0037.scaffold00140 1059505 1 A G scaffold40414 Both SNP 0037.scaffold00140 1059582 1 A G scaffold40414 ScafM SNP 0037.scaffold00140 1059597 2 AT GC scaffold40414 ScafM SNP 0037.scaffold00140 1061787 1 G A scaffold1543 ScafM SNP 0037.scaffold00140 1061831 1 C T scaffold1543 ScafM SNP 0037.scaffold00140 1061838 1 A G scaffold1543 ReadM SNP 0037.scaffold00140 1062580 1 A T - ReadM SNP 0037.scaffold00140 1062585 1 C A - ReadM SNP 0037.scaffold00140 1062629 1 G T - ReadM SNP 0037.scaffold00140 1062675 1 A T - ReadM SNP 0037.scaffold00140 1062837 1 T C - ReadM INDEL 0037.scaffold00140 1062996 1 . G - ReadM INDEL 0037.scaffold00140 1064349 3 TGT ... - ReadM SNP 0037.scaffold00140 1064435 1 G A - ReadM SNP 0037.scaffold00140 1064441 1 A G - ReadM SNP 0037.scaffold00140 1064455 1 G A - ReadM SNP 0037.scaffold00140 1064494 1 T C - ReadM SNP 0037.scaffold00140 1064631 1 A G - ReadM SNP 0037.scaffold00140 1064677 1 G A - ReadM SNP 0037.scaffold00140 1064681 1 A T - ReadM SNP 0037.scaffold00140 1064748 1 T A - ReadM SNP 0037.scaffold00140 1064796 1 G A - ReadM SNP 0037.scaffold00140 1064836 1 A G - ReadM SNP 0037.scaffold00140 1064884 1 A G - ReadM SNP 0037.scaffold00140 1065024 1 A G - ReadM SNP 0037.scaffold00140 1065064 1 G T - ReadM SNP 0037.scaffold00140 1065124 1 G A - ReadM SNP 0037.scaffold00140 1065273 1 T A - ReadM SNP 0037.scaffold00140 1065308 1 A G - ReadM SNP 0037.scaffold00140 1065384 1 G A - ReadM SNP 0037.scaffold00140 1065422 1 T C - ScafM SNP 0038.scaffold00149 40270 1 T C scaffold17097 ScafM SNP 0038.scaffold00149 106251 2 GG TT scaffold4388 ScafM INDEL 0038.scaffold00149 106265 5 TTAGT ..... scaffold4388 ScafM INDEL 0038.scaffold00149 106272 5 TTTTT ..... scaffold4388 ScafM INDEL 0038.scaffold00149 106279 4 ATGT .... scaffold4388 ScafM INDEL 0038.scaffold00149 106284 5 ATTCC ..... scaffold4388 ScafM INDEL 0038.scaffold00149 114163 1 . G scaffold4388 ScafM INDEL 0038.scaffold00149 114172 1 . T scaffold4388 Both INDEL 0038.scaffold00149 132109 2 AG .. scaffold4388 ScafM SNP 0038.scaffold00149 144048 1 C T scaffold4651 ScafM SNP 0038.scaffold00149 144054 1 G A scaffold4651 ScafM INDEL 0038.scaffold00149 144062 1 . A scaffold4651 ScafM SNP 0038.scaffold00149 144136 1 C T scaffold4651 ScafM INDEL 0038.scaffold00149 144144 1 T . scaffold4651 ScafM INDEL 0038.scaffold00149 144229 6 ...... ACTAGT scaffold4651 ScafM SNP 0038.scaffold00149 144288 1 A T scaffold4651 ScafM SNP 0038.scaffold00149 144454 1 T A scaffold4651 Both SNP 0038.scaffold00149 144708 1 A T scaffold4651 Both SNP 0038.scaffold00149 144765 1 G A scaffold4651 ReadM SNP 0038.scaffold00149 144827 1 T C - ReadM SNP 0038.scaffold00149 144847 1 G A - ReadM SNP 0038.scaffold00149 144859 1 C T - Both SNP 0038.scaffold00149 144948 1 A G scaffold4651 Both SNP 0038.scaffold00149 145219 1 A G scaffold4651 ReadM SNP 0038.scaffold00149 145477 1 C T - ReadM SNP 0038.scaffold00149 145495 1 G A - Both SNP 0038.scaffold00149 145531 1 G T scaffold4651 ScafM INDEL 0038.scaffold00149 145678 4 CGAT .... scaffold4651 ScafM SNP 0038.scaffold00149 145735 2 TC AT scaffold4651 Both SNP 0038.scaffold00149 145753 1 C A scaffold4651 Both SNP 0038.scaffold00149 145785 1 C T scaffold4651 Both SNP 0038.scaffold00149 145811 1 T C scaffold4651 Both SNP 0038.scaffold00149 145872 1 C T scaffold4651 ScafM INDEL 0038.scaffold00149 145971 1 . T scaffold4651 ScafM INDEL 0038.scaffold00149 146030 2 AG .. scaffold4651 ScafM SNP 0038.scaffold00149 146051 1 C T scaffold4651 ScafM SNP 0038.scaffold00149 146065 1 A G scaffold4651 ScafM SNP 0038.scaffold00149 146068 1 G A scaffold4651 ScafM SNP 0038.scaffold00149 146074 1 T C scaffold4651 Both INDEL 0038.scaffold00149 146115 1 . T scaffold4651 Both SNP 0038.scaffold00149 146198 1 A C scaffold4651 ReadM SNP 0038.scaffold00149 146386 1 A G - ReadM SNP 0038.scaffold00149 146474 1 A T - ReadM SNP 0038.scaffold00149 146583 1 G A - Both SNP 0038.scaffold00149 146615 1 C T scaffold4651 Both SNP 0038.scaffold00149 146666 1 T A scaffold4651 ReadM SNP 0038.scaffold00149 146991 1 C T - ReadM SNP 0038.scaffold00149 147038 1 T A - ReadM SNP 0038.scaffold00149 147319 1 C A - ReadM INDEL 0038.scaffold00149 147335 1 T . - ScafM SNP 0038.scaffold00149 147335 1 T A scaffold4651 ScafM SNP 0038.scaffold00149 147339 1 G A scaffold4651 ReadM SNP 0038.scaffold00149 147451 1 C T - ReadM SNP 0038.scaffold00149 147528 1 G A - ReadM SNP 0038.scaffold00149 147538 1 G A - Both SNP 0038.scaffold00149 147782 1 T A scaffold4651 ReadM SNP 0038.scaffold00149 148428 1 T G - ReadM SNP 0038.scaffold00149 148508 1 C G - ReadM SNP 0038.scaffold00149 148513 1 G T - ReadM SNP 0038.scaffold00149 148690 1 G A - ReadM SNP 0038.scaffold00149 148783 1 T A - ReadM SNP 0038.scaffold00149 148843 1 C T - ReadM SNP 0038.scaffold00149 148868 1 A G - ReadM SNP 0038.scaffold00149 148945 1 T A - ReadM SNP 0038.scaffold00149 149354 1 T C - ReadM SNP 0038.scaffold00149 149374 1 C T - ReadM SNP 0038.scaffold00149 149417 1 G A - ReadM SNP 0038.scaffold00149 149454 1 G A - ReadM SNP 0038.scaffold00149 149497 1 C T - ReadM SNP 0038.scaffold00149 149564 1 T C - ReadM INDEL 0038.scaffold00149 149618 1 . A - ReadM SNP 0038.scaffold00149 149744 1 G A - ReadM SNP 0038.scaffold00149 149940 1 A G - ReadM SNP 0038.scaffold00149 150093 1 G A - ScafM SNP 0038.scaffold00149 151011 1 T G scaffold4651 ScafM SNP 0038.scaffold00149 151054 1 T C scaffold4651 ScafM SNP 0038.scaffold00149 151137 1 A G scaffold4651 ScafM SNP 0038.scaffold00149 151198 1 C T scaffold4651 ScafM SNP 0038.scaffold00149 151356 1 A T scaffold4651 ScafM SNP 0038.scaffold00149 151393 1 C T scaffold4651 ScafM SNP 0038.scaffold00149 151598 1 G A scaffold4651 ScafM INDEL 0038.scaffold00149 151665 1 . A scaffold4651 ScafM INDEL 0038.scaffold00149 151694 1 T . scaffold4651 ScafM SNP 0038.scaffold00149 151696 1 T A scaffold4651 ScafM INDEL 0038.scaffold00149 151723 2 TT .. scaffold4651 ReadM INDEL 0038.scaffold00149 192827 1 . G - ScafM SNP 0038.scaffold00149 195427 1 C A scaffold6541 ScafM SNP 0038.scaffold00149 211489 1 A G scaffold31886 ScafM INDEL 0038.scaffold00149 245531 8 AGTTCGCA ........ scaffold2561 ScafM INDEL 0038.scaffold00149 262424 5 TGCCT ..... scaffold17508 ScafM SNP 0038.scaffold00149 262432 1 G A scaffold17508 ScafM SNP 0038.scaffold00149 262434 1 T A scaffold17508 ScafM INDEL 0038.scaffold00149 262436 1 A . scaffold17508 ScafM SNP 0038.scaffold00149 262438 1 A T scaffold17508 ScafM SNP 0038.scaffold00149 262440 1 A T scaffold17508 ScafM SNP 0038.scaffold00149 262442 1 C T scaffold17508 ScafM SNP 0038.scaffold00149 262444 1 A T scaffold17508 ScafM SNP 0038.scaffold00149 262446 1 A T scaffold17508 ScafM SNP 0038.scaffold00149 262448 1 G T scaffold17508 ScafM SNP 0038.scaffold00149 267496 1 G A scaffold13735 ScafM INDEL 0038.scaffold00149 267503 1 . C scaffold13735 ScafM SNP 0038.scaffold00149 267522 1 A C scaffold13735 ScafM SNP 0038.scaffold00149 267865 1 T G scaffold13735 ReadM SNP 0038.scaffold00149 309585 1 G A - ScafM INDEL 0038.scaffold00149 314125 1 . C scaffold1144 ScafM SNP 0038.scaffold00149 337392 1 C A scaffold1144 ScafM SNP 0038.scaffold00149 337558 1 C T scaffold1144 ScafM SNP 0038.scaffold00149 350071 2 TA AT scaffold1515 ScafM INDEL 0038.scaffold00149 361534 57 ......................................................... TCATGCCGACGGAGTCCGATTGCCTATTGTGATACCTTTTCGAAAGCGGAAAGTAAA scaffold1515 ScafM SNP 0038.scaffold00149 365222 1 A T scaffold1515 ScafM SNP 0038.scaffold00149 372747 1 A T scaffold6982 ScafM SNP 0038.scaffold00149 372755 1 A G scaffold6982 ScafM INDEL 0038.scaffold00149 372772 19 ATGGATTACATACATCCTC ................... scaffold6982 ScafM INDEL 0038.scaffold00149 372793 7 CCATTTC ....... scaffold6982 ScafM INDEL 0038.scaffold00149 372801 1 G . scaffold6982 ScafM SNP 0038.scaffold00149 372918 2 GC TG scaffold6982 ScafM SNP 0038.scaffold00149 372924 1 T G scaffold6982 Both INDEL 0038.scaffold00149 423126 1 . T scaffold1515 Both INDEL 0038.scaffold00149 444304 1 T . scaffold1515 ScafM SNP 0038.scaffold00149 445477 1 G A scaffold3082 ScafM SNP 0038.scaffold00149 445479 2 AG CC scaffold3082 ScafM SNP 0038.scaffold00149 445549 1 C A scaffold3082 ScafM SNP 0038.scaffold00149 445554 1 C T scaffold3082 ScafM SNP 0038.scaffold00149 461048 1 T G scaffold5576 ScafM INDEL 0038.scaffold00149 470655 37 ATGTGAATGTCTCCTTTGGTGTTAAGAATATTTTTTA ..................................... scaffold5576 ScafM SNP 0038.scaffold00149 477854 1 T C scaffold5576 ScafM SNP 0038.scaffold00149 478095 1 A G scaffold5576 ScafM SNP 0038.scaffold00149 478683 1 C T scaffold5576 ScafM SNP 0038.scaffold00149 478685 1 T C scaffold5576 ScafM SNP 0038.scaffold00149 478688 1 T C scaffold5576 ScafM SNP 0038.scaffold00149 478693 1 C T scaffold5576 ScafM SNP 0038.scaffold00149 478715 1 C T scaffold5576 ScafM SNP 0038.scaffold00149 478733 1 T G scaffold5576 ScafM SNP 0038.scaffold00149 478739 1 G A scaffold5576 ScafM SNP 0038.scaffold00149 478812 1 A G scaffold5576 ScafM SNP 0038.scaffold00149 478918 1 T C scaffold5576 ScafM INDEL 0038.scaffold00149 478996 2 .. AA scaffold5576 ScafM INDEL 0038.scaffold00149 478997 1 . A scaffold5576 ScafM SNP 0038.scaffold00149 479004 1 C A scaffold5576 ScafM SNP 0038.scaffold00149 484925 1 C T scaffold4196 ScafM SNP 0038.scaffold00149 484930 1 C T scaffold4196 ReadM SNP 0038.scaffold00149 535375 1 C T - ReadM SNP 0038.scaffold00149 550247 1 C T - ScafM SNP 0038.scaffold00149 561260 1 A C scaffold10799 ScafM SNP 0038.scaffold00149 561294 1 A G scaffold10799 ScafM SNP 0038.scaffold00149 561296 1 A G scaffold10799 ScafM SNP 0038.scaffold00149 561321 1 T C scaffold10799 ScafM SNP 0038.scaffold00149 561326 1 G A scaffold10799 ScafM SNP 0038.scaffold00149 583173 1 A G scaffold3486 Both SNP 0038.scaffold00149 595817 1 A G scaffold3486 ScafM SNP 0038.scaffold00149 602901 1 A G scaffold75253 ReadM INDEL 0038.scaffold00149 603104 1 . A - ScafM INDEL 0038.scaffold00149 622760 2 .. TT scaffold7594 ReadM SNP 0038.scaffold00149 632491 1 A G - ReadM SNP 0038.scaffold00149 632504 1 G A - ScafM SNP 0038.scaffold00149 641679 1 C T scaffold7594 ScafM SNP 0038.scaffold00149 668464 1 G T scaffold1443 ScafM SNP 0038.scaffold00149 678147 1 A T scaffold10151 ScafM INDEL 0038.scaffold00149 678156 1 C . scaffold10151 ScafM SNP 0038.scaffold00149 678249 1 A G scaffold21334 ScafM SNP 0038.scaffold00149 678455 1 A C scaffold21334 ScafM SNP 0038.scaffold00149 678500 1 T C scaffold21334 ScafM SNP 0038.scaffold00149 678509 2 CA TG scaffold21334 ReadM INDEL 0038.scaffold00149 692594 1 . G - ReadM SNP 0038.scaffold00149 698346 1 G A - ScafM INDEL 0038.scaffold00149 722679 2 .. AA scaffold40667 ScafM SNP 0038.scaffold00149 722680 1 C A scaffold40667 ScafM SNP 0038.scaffold00149 752591 1 T C scaffold19534 ScafM SNP 0038.scaffold00149 752611 1 T C scaffold19534 ScafM SNP 0038.scaffold00149 752645 1 T G scaffold19534 ScafM SNP 0038.scaffold00149 752692 1 A G scaffold19534 ScafM SNP 0038.scaffold00149 752704 1 T G scaffold19534 ScafM SNP 0038.scaffold00149 752757 1 G A scaffold19534 ScafM SNP 0038.scaffold00149 753134 1 A G scaffold19534 ScafM SNP 0038.scaffold00149 753137 1 T C scaffold19534 ScafM INDEL 0038.scaffold00149 753191 1 . T scaffold19534 ScafM SNP 0038.scaffold00149 753219 1 G A scaffold19534 ScafM SNP 0038.scaffold00149 753245 1 C T scaffold19534 ScafM SNP 0038.scaffold00149 753257 1 G C scaffold19534 ScafM SNP 0038.scaffold00149 753266 1 A T scaffold19534 ScafM SNP 0038.scaffold00149 753761 1 G T scaffold19534 ScafM SNP 0038.scaffold00149 776259 1 C A scaffold6209 ScafM SNP 0038.scaffold00149 776283 1 G A scaffold6209 ScafM SNP 0038.scaffold00149 776297 2 AT TC scaffold6209 ScafM SNP 0038.scaffold00149 776301 1 T C scaffold6209 ScafM SNP 0038.scaffold00149 776303 1 T A scaffold6209 ScafM INDEL 0038.scaffold00149 776317 14 AAATTCTAGATCTG .............. scaffold6209 ScafM SNP 0038.scaffold00149 776343 1 A G scaffold6209 ScafM SNP 0038.scaffold00149 776360 1 G A scaffold6209 ScafM SNP 0038.scaffold00149 776412 1 A G scaffold6209 ScafM SNP 0038.scaffold00149 776437 1 C T scaffold6209 ScafM SNP 0038.scaffold00149 776482 1 G A scaffold6209 ScafM SNP 0038.scaffold00149 776521 1 G T scaffold6209 ScafM SNP 0038.scaffold00149 776534 1 T C scaffold6209 ScafM SNP 0038.scaffold00149 776546 1 A T scaffold6209 ScafM SNP 0038.scaffold00149 776559 1 A C scaffold6209 ScafM SNP 0038.scaffold00149 776564 2 GC AT scaffold6209 ScafM SNP 0038.scaffold00149 776601 1 G A scaffold6209 ScafM SNP 0038.scaffold00149 776630 1 T C scaffold6209 ScafM SNP 0038.scaffold00149 776702 1 T G scaffold6209 ScafM SNP 0038.scaffold00149 776709 1 C T scaffold6209 ScafM SNP 0038.scaffold00149 776711 1 A G scaffold6209 ScafM SNP 0038.scaffold00149 776730 1 C T scaffold6209 ScafM SNP 0038.scaffold00149 779583 1 C A scaffold1426 ScafM SNP 0038.scaffold00149 842395 1 T C scaffold6160 ScafM INDEL 0038.scaffold00149 850167 1 . T scaffold6115 ReadM SNP 0038.scaffold00149 858141 1 C A - ScafM INDEL 0038.scaffold00149 859420 1 . G scaffold6115 ReadM INDEL 0038.scaffold00149 895764 3 GTT ... - ScafM SNP 0038.scaffold00149 951073 1 A G scaffold686 ScafM SNP 0038.scaffold00149 951077 1 C A scaffold686 ScafM SNP 0038.scaffold00149 951168 1 A G scaffold686 ScafM SNP 0038.scaffold00149 954905 1 A G scaffold686 ScafM SNP 0038.scaffold00149 956589 1 A T scaffold686 Both SNP 0038.scaffold00149 959070 1 C T scaffold686 ScafM SNP 0038.scaffold00149 1003971 2 TA AT scaffold5833 ScafM INDEL 0038.scaffold00149 1014619 12 ............ TTTTTTTTTTAA scaffold5833 ScafM INDEL 0038.scaffold00149 1017756 1 A . scaffold5833 ScafM INDEL 0038.scaffold00149 1032265 1 . A scaffold5833 ScafM INDEL 0038.scaffold00149 1045486 3 ... TTT scaffold6391 ScafM INDEL 0038.scaffold00149 1045488 1 . T scaffold6391 ScafM SNP 0038.scaffold00149 1056879 1 G A scaffold15524 ScafM SNP 0038.scaffold00149 1057097 1 C T scaffold15524 ScafM SNP 0038.scaffold00149 1057108 1 C T scaffold15524 ScafM SNP 0038.scaffold00149 1057480 1 T C scaffold6391 ScafM SNP 0038.scaffold00149 1057584 1 A C scaffold6391 ScafM SNP 0038.scaffold00149 1058042 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1058070 1 C A scaffold6391 ScafM SNP 0038.scaffold00149 1058087 1 G A scaffold6391 ScafM SNP 0038.scaffold00149 1058281 1 A T scaffold6391 ScafM SNP 0038.scaffold00149 1058351 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1058595 1 T A scaffold6391 ScafM INDEL 0038.scaffold00149 1058607 1 A . scaffold6391 ScafM INDEL 0038.scaffold00149 1058691 1 A . scaffold6391 ScafM SNP 0038.scaffold00149 1058711 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1058717 1 T C scaffold6391 ScafM SNP 0038.scaffold00149 1058725 1 G A scaffold6391 ScafM SNP 0038.scaffold00149 1058739 1 G A scaffold6391 ScafM SNP 0038.scaffold00149 1058795 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1058831 1 C A scaffold6391 ScafM SNP 0038.scaffold00149 1058833 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1058984 1 G A scaffold6391 ScafM INDEL 0038.scaffold00149 1058993 1 . C scaffold6391 ScafM SNP 0038.scaffold00149 1059020 1 A G scaffold6391 ScafM SNP 0038.scaffold00149 1059125 1 T C scaffold6391 ScafM SNP 0038.scaffold00149 1059141 1 C T scaffold6391 ScafM INDEL 0038.scaffold00149 1059366 1 A . scaffold6391 ScafM SNP 0038.scaffold00149 1059402 1 C T scaffold6391 ScafM SNP 0038.scaffold00149 1059417 1 A G scaffold6391 ScafM INDEL 0038.scaffold00149 1059622 1 C . scaffold6391 ScafM SNP 0038.scaffold00149 1060049 1 A G scaffold6391 ScafM SNP 0038.scaffold00149 1061050 1 G A scaffold6391 ScafM SNP 0039.scaffold00152 5790 1 T A scaffold50412 ScafM SNP 0039.scaffold00152 6285 1 G A scaffold50412 ScafM SNP 0039.scaffold00152 6309 1 A C scaffold50412 ScafM SNP 0039.scaffold00152 6345 1 C A scaffold50412 ScafM SNP 0039.scaffold00152 6357 1 A G scaffold50412 ScafM INDEL 0039.scaffold00152 6387 2 AA .. scaffold50412 ScafM SNP 0039.scaffold00152 6823 1 T C scaffold50412 ScafM INDEL 0039.scaffold00152 6835 5 AGGTC ..... scaffold50412 ScafM SNP 0039.scaffold00152 6842 1 T G scaffold50412 ScafM SNP 0039.scaffold00152 6880 1 G A scaffold50412 ScafM SNP 0039.scaffold00152 6925 1 A G scaffold50412 ScafM INDEL 0039.scaffold00152 6950 1 . C scaffold50412 ScafM INDEL 0039.scaffold00152 6952 2 .. TT scaffold50412 ScafM SNP 0039.scaffold00152 6957 1 A T scaffold50412 ScafM SNP 0039.scaffold00152 6965 1 G A scaffold50412 ScafM INDEL 0039.scaffold00152 6982 36 .................................... GTAGGTAAATTACCTACCGATCTCTAAAAACAGTAG scaffold50412 ScafM INDEL 0039.scaffold00152 9007 4 .... CGAT scaffold51310 ScafM INDEL 0039.scaffold00152 9029 29 TCCTTCCCCCAAAGGAGACCTCCTCTTCT ............................. scaffold51310 ScafM SNP 0039.scaffold00152 9163 2 GT CG scaffold51310 ScafM SNP 0039.scaffold00152 9237 1 A G scaffold51310 ScafM SNP 0039.scaffold00152 9268 1 A G scaffold51310 ScafM INDEL 0039.scaffold00152 9275 1 C . scaffold51310 ScafM SNP 0039.scaffold00152 9669 1 A G scaffold51310 ScafM SNP 0039.scaffold00152 9690 1 C T scaffold51310 ScafM SNP 0039.scaffold00152 9831 1 C T scaffold51310 ScafM SNP 0039.scaffold00152 9905 1 T C scaffold51310 ScafM INDEL 0039.scaffold00152 13771 2 AA .. scaffold60318 ScafM SNP 0039.scaffold00152 13820 1 C T scaffold60318 ScafM INDEL 0039.scaffold00152 13918 1 . T scaffold60318 ScafM SNP 0039.scaffold00152 14012 1 G A scaffold60318 ScafM SNP 0039.scaffold00152 14103 1 C T scaffold60318 ScafM SNP 0039.scaffold00152 14164 1 C A scaffold60318 ScafM SNP 0039.scaffold00152 14222 1 C A scaffold60318 ScafM SNP 0039.scaffold00152 14235 2 CT AA scaffold60318 ScafM SNP 0039.scaffold00152 14244 1 C T scaffold60318 ScafM SNP 0039.scaffold00152 14292 1 G A scaffold60318 ScafM SNP 0039.scaffold00152 14339 1 T A scaffold60318 ScafM SNP 0039.scaffold00152 14424 1 A G scaffold60318 ScafM SNP 0039.scaffold00152 14440 1 A G scaffold60318 ScafM SNP 0039.scaffold00152 14451 1 T A scaffold60318 ScafM SNP 0039.scaffold00152 14514 1 A G scaffold60318 ReadM SNP 0039.scaffold00152 15571 1 C T - ScafM INDEL 0039.scaffold00152 16013 1 T . C19664719 ScafM SNP 0039.scaffold00152 16026 1 G A C19664719 ScafM SNP 0039.scaffold00152 16184 1 G A C19664719 ScafM SNP 0039.scaffold00152 16188 1 G A C19664719 ScafM SNP 0039.scaffold00152 16254 1 G A C19664719 ScafM SNP 0039.scaffold00152 16322 1 A G C19664719 ScafM SNP 0039.scaffold00152 16330 1 C T C19664719 ScafM SNP 0039.scaffold00152 16910 1 G C C19664719 ScafM SNP 0039.scaffold00152 16982 1 C T C19664719 ScafM SNP 0039.scaffold00152 21318 1 T C C19686897 ScafM SNP 0039.scaffold00152 21752 1 C A C19686897 ScafM SNP 0039.scaffold00152 21830 1 A G C19686897 ScafM INDEL 0039.scaffold00152 21854 3 AAA ... C19686897 ScafM SNP 0039.scaffold00152 21953 1 T C C19686897 ScafM SNP 0039.scaffold00152 25722 1 G A scaffold32352 ScafM SNP 0039.scaffold00152 25754 1 G A scaffold32352 ScafM SNP 0039.scaffold00152 26599 1 C T scaffold32352 ScafM SNP 0039.scaffold00152 26609 1 C G scaffold32352 ScafM INDEL 0039.scaffold00152 26781 9 ......... TAATCATAT scaffold32352 ScafM SNP 0039.scaffold00152 26994 1 A G scaffold32352 ScafM SNP 0039.scaffold00152 27209 1 G A scaffold32352 ScafM INDEL 0039.scaffold00152 27258 1 . T scaffold32352 ScafM INDEL 0039.scaffold00152 27309 3 ATA ... scaffold32352 ScafM SNP 0039.scaffold00152 27320 1 A G scaffold32352 ScafM SNP 0039.scaffold00152 27327 1 T C scaffold32352 ScafM SNP 0039.scaffold00152 27374 1 A T scaffold32352 ScafM SNP 0039.scaffold00152 27384 1 T A scaffold32352 ScafM SNP 0039.scaffold00152 27466 1 G A scaffold32352 ScafM SNP 0039.scaffold00152 28035 1 G C scaffold24349 ScafM SNP 0039.scaffold00152 30009 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 30014 1 T C scaffold24349 ScafM INDEL 0039.scaffold00152 30023 53 AGTATTAAATTTTATTTTTTTTGGGTAAGTAAGTAAGATTTTATAGCTCAAAA ..................................................... scaffold24349 ScafM SNP 0039.scaffold00152 30108 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 30115 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 30126 1 A T scaffold24349 ScafM SNP 0039.scaffold00152 30171 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 30233 1 C A scaffold24349 ScafM SNP 0039.scaffold00152 30256 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 30272 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 30289 1 A T scaffold24349 ScafM INDEL 0039.scaffold00152 30325 4 .... TTAA scaffold24349 ScafM SNP 0039.scaffold00152 30331 1 A G scaffold24349 ScafM SNP 0039.scaffold00152 30334 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 30339 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 30381 1 C G scaffold24349 ScafM SNP 0039.scaffold00152 30392 1 T G scaffold24349 ScafM INDEL 0039.scaffold00152 30398 9 TTTTCTAAA ......... scaffold24349 ScafM SNP 0039.scaffold00152 30464 1 A G scaffold24349 ScafM INDEL 0039.scaffold00152 30472 6 TTGTAA ...... scaffold24349 ScafM SNP 0039.scaffold00152 30522 1 T G scaffold24349 ScafM SNP 0039.scaffold00152 30532 1 G T scaffold24349 ScafM SNP 0039.scaffold00152 30547 2 AG TT scaffold24349 ScafM SNP 0039.scaffold00152 30559 1 G C scaffold24349 ScafM SNP 0039.scaffold00152 30891 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 31281 1 A G scaffold70440 ScafM SNP 0039.scaffold00152 31866 1 C T scaffold70440 ScafM SNP 0039.scaffold00152 31900 1 G T scaffold70440 ScafM SNP 0039.scaffold00152 31902 1 T C scaffold70440 ScafM SNP 0039.scaffold00152 31965 1 C T scaffold70440 ScafM SNP 0039.scaffold00152 34313 1 A T scaffold24349 ScafM SNP 0039.scaffold00152 34318 1 T A scaffold24349 ScafM INDEL 0039.scaffold00152 34340 1 T . scaffold24349 ScafM SNP 0039.scaffold00152 34349 1 A T scaffold24349 ScafM SNP 0039.scaffold00152 34366 1 G C scaffold24349 ScafM SNP 0039.scaffold00152 34384 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 34413 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 34465 1 A T scaffold24349 ScafM SNP 0039.scaffold00152 34469 1 G T scaffold24349 ScafM SNP 0039.scaffold00152 34492 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 34521 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 34524 1 T G scaffold24349 ScafM SNP 0039.scaffold00152 34541 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 34557 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 34597 1 C G scaffold24349 ScafM SNP 0039.scaffold00152 34618 1 G T scaffold24349 ScafM INDEL 0039.scaffold00152 34635 1 A . scaffold24349 ScafM SNP 0039.scaffold00152 34697 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 34735 1 A G scaffold24349 ScafM SNP 0039.scaffold00152 34738 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 34827 1 C A scaffold24349 ScafM INDEL 0039.scaffold00152 34879 1 T . scaffold24349 ScafM INDEL 0039.scaffold00152 34888 4 CACG .... scaffold24349 ScafM SNP 0039.scaffold00152 34896 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 34901 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 34916 1 C T scaffold24349 ScafM SNP 0039.scaffold00152 34920 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 34953 1 G A scaffold24349 ScafM INDEL 0039.scaffold00152 35006 1 T . scaffold24349 ScafM SNP 0039.scaffold00152 35188 1 G T scaffold24349 ScafM SNP 0039.scaffold00152 35201 1 T C scaffold24349 ScafM INDEL 0039.scaffold00152 35302 8 CATCAAGA ........ scaffold24349 ScafM SNP 0039.scaffold00152 35329 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 35338 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 35370 1 C G scaffold24349 ScafM SNP 0039.scaffold00152 35376 1 C G scaffold24349 ScafM SNP 0039.scaffold00152 35421 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 35447 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 35500 1 G T scaffold24349 ScafM SNP 0039.scaffold00152 35529 1 T G scaffold24349 ScafM SNP 0039.scaffold00152 35538 2 CA TC scaffold24349 ScafM SNP 0039.scaffold00152 35553 1 G T scaffold24349 ScafM SNP 0039.scaffold00152 35579 1 G A scaffold24349 ScafM INDEL 0039.scaffold00152 35590 2 CC .G scaffold24349 ScafM SNP 0039.scaffold00152 35603 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 35643 1 G C scaffold24349 ScafM SNP 0039.scaffold00152 35684 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 35739 1 G C scaffold24349 ScafM INDEL 0039.scaffold00152 35740 2 .. TC scaffold24349 ScafM SNP 0039.scaffold00152 35741 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 35744 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 36859 1 G A scaffold24349 ScafM SNP 0039.scaffold00152 36881 1 T C scaffold24349 ScafM SNP 0039.scaffold00152 36899 1 C A scaffold24349 ScafM SNP 0039.scaffold00152 36902 1 T A scaffold24349 ScafM SNP 0039.scaffold00152 36957 1 C G scaffold24349 ScafM INDEL 0039.scaffold00152 37021 1 . C scaffold24349 ScafM SNP 0039.scaffold00152 37035 1 C A scaffold24349 ScafM SNP 0039.scaffold00152 37067 1 C G scaffold8688 ScafM SNP 0039.scaffold00152 37091 1 T C scaffold8688 ScafM SNP 0039.scaffold00152 37124 1 G A scaffold8688 ScafM SNP 0039.scaffold00152 37235 1 A C scaffold8688 ScafM INDEL 0039.scaffold00152 37240 1 . A scaffold8688 ScafM SNP 0039.scaffold00152 37249 1 T A scaffold8688 ScafM SNP 0039.scaffold00152 37358 1 T A scaffold8688 ScafM INDEL 0039.scaffold00152 37509 21 CTCCAGCTTCACTTCTCTTAT ..................... scaffold8688 ScafM SNP 0039.scaffold00152 37566 1 T C scaffold8688 ScafM INDEL 0039.scaffold00152 37706 1 . T scaffold8688 ScafM SNP 0039.scaffold00152 37713 1 C T scaffold8688 ScafM INDEL 0039.scaffold00152 37718 2 TT .. scaffold8688 ScafM SNP 0039.scaffold00152 40636 1 T C scaffold64737 ScafM INDEL 0039.scaffold00152 40644 1 . T scaffold64737 ScafM SNP 0039.scaffold00152 40661 1 G T scaffold64737 ScafM SNP 0039.scaffold00152 40843 1 A G scaffold64737 ScafM INDEL 0039.scaffold00152 41745 13 ............. TAGTTTTTTTTTT scaffold51492 ScafM SNP 0039.scaffold00152 41780 1 G T scaffold51492 ScafM SNP 0039.scaffold00152 41816 1 A T scaffold51492 ScafM SNP 0039.scaffold00152 41864 1 G T scaffold51492 ScafM INDEL 0039.scaffold00152 41926 4 ACTT .... scaffold51492 ScafM INDEL 0039.scaffold00152 41958 1 . T scaffold51492 ReadM SNP 0039.scaffold00152 43124 1 G A - ScafM SNP 0039.scaffold00152 45524 1 A G scaffold33554 ScafM SNP 0039.scaffold00152 45542 1 A G scaffold33554 ScafM SNP 0039.scaffold00152 45555 2 CG AA scaffold33554 ScafM INDEL 0039.scaffold00152 45568 4 TTTT .... scaffold33554 ScafM SNP 0039.scaffold00152 51001 2 GT AA scaffold33554 ScafM SNP 0039.scaffold00152 51022 1 A G scaffold33554 ScafM SNP 0039.scaffold00152 51028 1 A C scaffold33554 ScafM SNP 0039.scaffold00152 53689 1 T A scaffold12152 ScafM SNP 0039.scaffold00152 53697 1 T C scaffold12152 ScafM SNP 0039.scaffold00152 53746 2 CA AG scaffold12152 ScafM SNP 0039.scaffold00152 53755 1 C T scaffold12152 ScafM INDEL 0039.scaffold00152 53769 1 T . scaffold12152 ScafM SNP 0039.scaffold00152 53777 1 T A scaffold12152 ScafM SNP 0039.scaffold00152 53783 1 G A scaffold12152 ScafM SNP 0039.scaffold00152 53800 1 G A scaffold12152 ScafM INDEL 0039.scaffold00152 55631 68 .................................................................... TCTACAAGCCCATCACTCGAGGTCTCCAGGCTATCCTTAAAATGTCTTTTTTAAGTGTATATTTTGGT scaffold48216 ScafM SNP 0039.scaffold00152 55688 1 T C scaffold48216 ScafM SNP 0039.scaffold00152 55886 1 T A scaffold48216 ScafM SNP 0039.scaffold00152 55888 1 A C scaffold48216 ScafM SNP 0039.scaffold00152 55903 1 A T scaffold48216 ScafM SNP 0039.scaffold00152 56216 1 T A scaffold48216 ScafM SNP 0039.scaffold00152 56235 1 T C scaffold48216 ScafM SNP 0039.scaffold00152 56322 1 A G scaffold48216 ScafM SNP 0039.scaffold00152 56325 1 A T scaffold48216 ScafM SNP 0039.scaffold00152 56406 1 C T scaffold48216 ScafM INDEL 0039.scaffold00152 56665 12 ............ ATGTGTGATATA scaffold48216 ScafM SNP 0039.scaffold00152 56876 1 G A scaffold48216 ScafM SNP 0039.scaffold00152 56926 1 A C scaffold48216 ScafM SNP 0039.scaffold00152 56950 1 C T scaffold48216 ScafM INDEL 0039.scaffold00152 58493 4 .... TCAA scaffold17957 ScafM SNP 0039.scaffold00152 58545 1 T A scaffold17957 ScafM SNP 0039.scaffold00152 58633 1 C T scaffold17957 ScafM SNP 0039.scaffold00152 58690 1 A G scaffold17957 ScafM SNP 0039.scaffold00152 58709 1 G A scaffold17957 ScafM SNP 0039.scaffold00152 58731 1 A C scaffold17957 ScafM INDEL 0039.scaffold00152 59239 1 A . scaffold17957 ScafM SNP 0039.scaffold00152 59241 1 A T scaffold17957 ScafM SNP 0039.scaffold00152 59246 1 T C scaffold17957 ScafM SNP 0039.scaffold00152 59599 1 G A scaffold17957 ReadM SNP 0039.scaffold00152 60424 1 T G - ScafM SNP 0039.scaffold00152 61436 1 T G scaffold59668 ScafM SNP 0039.scaffold00152 61444 1 A T scaffold59668 ScafM SNP 0039.scaffold00152 61467 1 A G scaffold59668 ScafM SNP 0039.scaffold00152 62269 1 C A scaffold59668 ScafM SNP 0039.scaffold00152 63518 1 A T scaffold34450 ScafM INDEL 0039.scaffold00152 63593 1 . T scaffold34450 ScafM SNP 0039.scaffold00152 67942 1 T C scaffold67674 ScafM SNP 0039.scaffold00152 68534 1 G T scaffold34450 ScafM SNP 0039.scaffold00152 68597 1 T C scaffold34450 ScafM SNP 0039.scaffold00152 71859 1 A T scaffold35840 ScafM SNP 0039.scaffold00152 72074 1 G A scaffold35840 ScafM INDEL 0039.scaffold00152 72082 2 .. TG scaffold35840 ScafM SNP 0039.scaffold00152 72424 1 C T scaffold34450 ScafM SNP 0039.scaffold00152 72431 1 A G scaffold34450 ScafM SNP 0039.scaffold00152 72445 1 C A scaffold34450 ScafM SNP 0039.scaffold00152 72530 1 G A scaffold34450 ScafM SNP 0039.scaffold00152 72542 1 T C scaffold34450 ScafM SNP 0039.scaffold00152 72544 1 T A scaffold34450 ScafM SNP 0039.scaffold00152 72652 1 C T scaffold34450 ScafM INDEL 0039.scaffold00152 72950 1 . G scaffold35840 ScafM SNP 0039.scaffold00152 72997 1 G A scaffold35840 ScafM SNP 0039.scaffold00152 73002 1 A G scaffold35840 ScafM SNP 0039.scaffold00152 73022 1 A T scaffold35840 ScafM SNP 0039.scaffold00152 73038 1 C T scaffold35840 ScafM SNP 0039.scaffold00152 73964 2 AA TT scaffold35840 ScafM SNP 0039.scaffold00152 73972 1 A C scaffold35840 ScafM INDEL 0039.scaffold00152 73984 2 .G AC scaffold35840 ScafM SNP 0039.scaffold00152 73988 2 GA AG scaffold35840 ScafM SNP 0039.scaffold00152 74181 1 A G scaffold15369 ScafM SNP 0039.scaffold00152 74196 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 74198 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 74221 1 A T scaffold15369 ScafM SNP 0039.scaffold00152 74226 1 T C scaffold15369 ScafM SNP 0039.scaffold00152 74256 1 A C scaffold15369 ScafM SNP 0039.scaffold00152 74267 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 74270 1 T C scaffold15369 ScafM INDEL 0039.scaffold00152 74305 2 TT .. scaffold15369 ScafM SNP 0039.scaffold00152 74545 1 T C scaffold31277 ScafM SNP 0039.scaffold00152 74582 1 G T scaffold31277 ScafM SNP 0039.scaffold00152 74640 1 G A scaffold31277 ScafM SNP 0039.scaffold00152 74683 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 74904 1 A C scaffold31277 ScafM SNP 0039.scaffold00152 74919 1 G A scaffold31277 ScafM SNP 0039.scaffold00152 74931 1 C A scaffold31277 ScafM INDEL 0039.scaffold00152 75974 10 .......... AAAAAACTAA scaffold31277 ScafM INDEL 0039.scaffold00152 75997 1 A . scaffold31277 ScafM SNP 0039.scaffold00152 75999 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 76186 1 G A scaffold31277 ScafM INDEL 0039.scaffold00152 76611 1 A . scaffold2869 ScafM INDEL 0039.scaffold00152 76627 7 TATCTAG ....... scaffold2869 ScafM INDEL 0039.scaffold00152 76635 3 TTA ... scaffold2869 ScafM INDEL 0039.scaffold00152 76643 3 CCG ..T scaffold2869 ScafM INDEL 0039.scaffold00152 76650 2 CT .. scaffold2869 ScafM SNP 0039.scaffold00152 76653 1 C T scaffold2869 ScafM SNP 0039.scaffold00152 76656 1 A T scaffold2869 ScafM SNP 0039.scaffold00152 76722 1 C T scaffold2869 ScafM INDEL 0039.scaffold00152 76732 3 AGT ... scaffold2869 ScafM SNP 0039.scaffold00152 76736 1 A C scaffold2869 ScafM INDEL 0039.scaffold00152 76754 1 . A scaffold2869 ScafM SNP 0039.scaffold00152 76771 1 C T scaffold2869 ScafM SNP 0039.scaffold00152 76804 1 A T scaffold2869 ScafM INDEL 0039.scaffold00152 76854 3 AGA ... scaffold2869 ScafM SNP 0039.scaffold00152 76864 1 G C scaffold2869 ScafM SNP 0039.scaffold00152 76948 1 G A scaffold2869 ScafM SNP 0039.scaffold00152 76985 1 G C scaffold2869 ScafM SNP 0039.scaffold00152 77102 1 A G scaffold2869 ScafM SNP 0039.scaffold00152 77141 1 C T scaffold2869 ScafM INDEL 0039.scaffold00152 77194 3 ... CTA scaffold2869 ScafM SNP 0039.scaffold00152 77209 1 G T scaffold2869 ScafM SNP 0039.scaffold00152 77217 1 T G scaffold2869 ScafM SNP 0039.scaffold00152 77260 1 C T scaffold2869 ScafM SNP 0039.scaffold00152 77399 1 C G scaffold2869 ScafM SNP 0039.scaffold00152 77405 1 C A scaffold2869 ScafM INDEL 0039.scaffold00152 77426 3 ... GGA scaffold2869 ScafM SNP 0039.scaffold00152 77431 1 G C scaffold2869 ScafM SNP 0039.scaffold00152 77434 2 GA CT scaffold2869 ScafM SNP 0039.scaffold00152 77437 1 A T scaffold2869 ScafM SNP 0039.scaffold00152 77439 1 A C scaffold2869 ScafM INDEL 0039.scaffold00152 77441 2 TT .. scaffold2869 ScafM SNP 0039.scaffold00152 77445 1 T G scaffold2869 ScafM INDEL 0039.scaffold00152 77452 4 .... GAGC scaffold2869 ScafM SNP 0039.scaffold00152 77455 1 T G scaffold2869 ScafM SNP 0039.scaffold00152 77570 1 G C scaffold2869 ScafM SNP 0039.scaffold00152 77582 1 A G scaffold2869 ScafM INDEL 0039.scaffold00152 77584 4 .... TACA scaffold2869 ScafM INDEL 0039.scaffold00152 77605 4 .... TGTA scaffold2869 ScafM INDEL 0039.scaffold00152 77627 1 G . scaffold2869 ScafM SNP 0039.scaffold00152 77629 2 AG CC scaffold2869 ScafM SNP 0039.scaffold00152 77632 1 T A scaffold2869 ScafM SNP 0039.scaffold00152 77639 1 T C scaffold2869 ScafM SNP 0039.scaffold00152 78279 1 T C scaffold31277 ScafM INDEL 0039.scaffold00152 78329 3 AGT ... scaffold31277 ScafM SNP 0039.scaffold00152 78412 1 A G scaffold31277 ScafM INDEL 0039.scaffold00152 78464 13 TCATATTAATTCT ............. scaffold31277 ScafM SNP 0039.scaffold00152 78511 1 C G scaffold31277 ScafM SNP 0039.scaffold00152 78520 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 78533 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 78538 1 A T scaffold31277 ScafM SNP 0039.scaffold00152 78545 1 C T scaffold31277 ScafM SNP 0039.scaffold00152 78564 1 C T scaffold31277 ScafM SNP 0039.scaffold00152 78578 1 G A scaffold31277 ScafM SNP 0039.scaffold00152 78675 1 T C scaffold31277 ScafM SNP 0039.scaffold00152 78705 1 G T scaffold31277 ScafM SNP 0039.scaffold00152 78720 1 T C scaffold31277 ScafM SNP 0039.scaffold00152 78729 1 C T scaffold31277 ScafM SNP 0039.scaffold00152 78740 1 T C scaffold31277 ScafM SNP 0039.scaffold00152 78755 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 78871 1 T G scaffold31277 ScafM SNP 0039.scaffold00152 78892 1 A C scaffold31277 ScafM INDEL 0039.scaffold00152 78897 2 CG .. scaffold31277 ScafM SNP 0039.scaffold00152 78901 1 C A scaffold31277 ScafM SNP 0039.scaffold00152 79145 1 T C scaffold29216 ScafM SNP 0039.scaffold00152 79158 1 C T scaffold29216 ScafM SNP 0039.scaffold00152 79858 1 C A scaffold102 ScafM INDEL 0039.scaffold00152 79884 1 . C scaffold102 ScafM SNP 0039.scaffold00152 79899 1 C T scaffold102 ScafM SNP 0039.scaffold00152 79943 1 T G scaffold102 ScafM SNP 0039.scaffold00152 79946 1 C T scaffold102 ScafM SNP 0039.scaffold00152 79966 1 C G scaffold102 ScafM SNP 0039.scaffold00152 79989 1 A G scaffold102 ScafM SNP 0039.scaffold00152 80031 1 G C scaffold102 ScafM SNP 0039.scaffold00152 80091 1 T A scaffold102 ScafM SNP 0039.scaffold00152 80108 1 C T scaffold102 ScafM SNP 0039.scaffold00152 80115 1 C A scaffold102 ScafM SNP 0039.scaffold00152 80123 1 T G scaffold102 ScafM SNP 0039.scaffold00152 80152 1 A G scaffold102 ScafM SNP 0039.scaffold00152 80165 1 A G scaffold102 ScafM SNP 0039.scaffold00152 80176 1 T G scaffold102 ScafM SNP 0039.scaffold00152 80195 1 G A scaffold102 ScafM SNP 0039.scaffold00152 80216 1 A G scaffold102 ScafM SNP 0039.scaffold00152 80290 1 A G scaffold102 ScafM SNP 0039.scaffold00152 80293 1 T A scaffold102 ScafM SNP 0039.scaffold00152 80320 1 C G scaffold102 ScafM INDEL 0039.scaffold00152 80330 1 T . scaffold102 ScafM SNP 0039.scaffold00152 80340 1 T A scaffold102 ScafM SNP 0039.scaffold00152 80351 1 C A scaffold102 ScafM SNP 0039.scaffold00152 80377 1 T G scaffold102 ScafM SNP 0039.scaffold00152 80388 1 C T scaffold102 ReadM SNP 0039.scaffold00152 80543 1 A T - ScafM SNP 0039.scaffold00152 82151 1 G A scaffold3601 ScafM SNP 0039.scaffold00152 82195 1 T C scaffold3601 ScafM SNP 0039.scaffold00152 82219 1 C T scaffold3601 ScafM SNP 0039.scaffold00152 82236 1 C A scaffold3601 ScafM SNP 0039.scaffold00152 82245 1 C T scaffold3601 ScafM SNP 0039.scaffold00152 82265 1 C T scaffold3601 ScafM SNP 0039.scaffold00152 82291 1 C T scaffold3601 ScafM SNP 0039.scaffold00152 82320 1 T C scaffold3601 ScafM SNP 0039.scaffold00152 82346 1 A C scaffold3601 ScafM INDEL 0039.scaffold00152 82353 3 ... TAC scaffold3601 ScafM SNP 0039.scaffold00152 82422 2 CT TC scaffold3601 ScafM INDEL 0039.scaffold00152 82427 4 .... AACT scaffold3601 ScafM SNP 0039.scaffold00152 82437 1 T A scaffold3601 ScafM SNP 0039.scaffold00152 82471 1 T A scaffold3601 ScafM INDEL 0039.scaffold00152 82483 4 .... ATTC scaffold3601 ScafM SNP 0039.scaffold00152 84604 1 A G scaffold31277 ScafM SNP 0039.scaffold00152 94763 1 T C scaffold31277 ScafM SNP 0039.scaffold00152 96356 1 T C scaffold24005 ScafM SNP 0039.scaffold00152 96396 1 C T scaffold24005 ScafM SNP 0039.scaffold00152 96402 1 A T scaffold24005 ScafM SNP 0039.scaffold00152 96405 1 G T scaffold24005 ScafM SNP 0039.scaffold00152 96421 1 T A scaffold24005 ScafM SNP 0039.scaffold00152 96426 1 A C scaffold24005 ScafM SNP 0039.scaffold00152 96443 1 A G scaffold24005 ScafM SNP 0039.scaffold00152 96447 1 T A scaffold24005 Both SNP 0039.scaffold00152 96465 1 A C scaffold24005 Both SNP 0039.scaffold00152 96585 1 A C scaffold24005 ScafM SNP 0039.scaffold00152 96654 1 G A scaffold24005 ScafM INDEL 0039.scaffold00152 96679 7 AGACAAG ....... scaffold24005 ScafM INDEL 0039.scaffold00152 97247 3 AAT ... scaffold24005 ScafM SNP 0039.scaffold00152 98036 1 T G scaffold30834 ScafM SNP 0039.scaffold00152 98038 1 C A scaffold30834 ScafM SNP 0039.scaffold00152 98069 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 98077 1 T A scaffold30834 Both SNP 0039.scaffold00152 98102 1 G T scaffold30834 Both INDEL 0039.scaffold00152 98174 2 GG .. scaffold30834 Both SNP 0039.scaffold00152 98243 1 G A scaffold30834 Both SNP 0039.scaffold00152 98249 1 T C scaffold30834 Both SNP 0039.scaffold00152 98468 1 C A scaffold30834 Both SNP 0039.scaffold00152 98483 1 C T scaffold30834 Both SNP 0039.scaffold00152 98605 1 A G scaffold30834 Both SNP 0039.scaffold00152 98718 1 A T scaffold30834 ScafM SNP 0039.scaffold00152 98722 1 G A scaffold30834 Both SNP 0039.scaffold00152 98782 1 T G scaffold30834 Both SNP 0039.scaffold00152 98824 1 A G scaffold30834 Both INDEL 0039.scaffold00152 98827 1 A . scaffold30834 Both SNP 0039.scaffold00152 98952 1 T C scaffold30834 Both SNP 0039.scaffold00152 98957 1 C A scaffold30834 Both SNP 0039.scaffold00152 99118 1 A G scaffold30834 Both SNP 0039.scaffold00152 99185 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 99695 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 99817 1 A T scaffold30834 ScafM SNP 0039.scaffold00152 100031 1 T G scaffold30834 ScafM SNP 0039.scaffold00152 100190 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 100710 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 100841 1 A T scaffold30834 ScafM INDEL 0039.scaffold00152 101493 7 ....... ACTTGCA scaffold30834 ScafM SNP 0039.scaffold00152 101576 1 C T scaffold30834 ScafM SNP 0039.scaffold00152 101765 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 101843 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 102750 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 102925 1 C T scaffold30834 ScafM SNP 0039.scaffold00152 103551 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 103845 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 105268 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 105425 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 105518 1 T G scaffold30834 ScafM SNP 0039.scaffold00152 105526 2 CA AG scaffold30834 ScafM SNP 0039.scaffold00152 105532 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 105539 1 A T scaffold30834 ScafM INDEL 0039.scaffold00152 105663 2 TT .A scaffold30834 ScafM SNP 0039.scaffold00152 105672 1 G A scaffold30834 ScafM INDEL 0039.scaffold00152 105678 1 . T scaffold30834 ScafM SNP 0039.scaffold00152 105682 1 G T scaffold30834 ScafM SNP 0039.scaffold00152 105688 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 105691 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 105694 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 105698 1 T G scaffold30834 ScafM SNP 0039.scaffold00152 105715 1 C A scaffold30834 ScafM SNP 0039.scaffold00152 105836 1 G A scaffold30834 ScafM SNP 0039.scaffold00152 105926 1 C G scaffold30834 ScafM SNP 0039.scaffold00152 106040 1 A T scaffold30834 ScafM SNP 0039.scaffold00152 106066 1 C T scaffold30834 ScafM SNP 0039.scaffold00152 111294 1 A T scaffold30834 ScafM SNP 0039.scaffold00152 111360 1 T C scaffold30834 ScafM SNP 0039.scaffold00152 111370 1 T A scaffold30834 ScafM SNP 0039.scaffold00152 111435 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 111453 1 A G scaffold30834 ScafM SNP 0039.scaffold00152 111505 1 T C scaffold30834 ScafM INDEL 0039.scaffold00152 111549 7 ACTTATA ....... scaffold30834 ScafM SNP 0039.scaffold00152 111563 1 G C scaffold30834 ScafM SNP 0039.scaffold00152 111600 1 C A scaffold30834 ScafM SNP 0039.scaffold00152 111743 1 T C scaffold30834 ScafM INDEL 0039.scaffold00152 111749 1 C . scaffold30834 ScafM SNP 0039.scaffold00152 111788 1 A C scaffold30834 ScafM SNP 0039.scaffold00152 111939 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 111948 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 112747 1 G T scaffold985 ScafM SNP 0039.scaffold00152 112758 1 G A scaffold985 ScafM INDEL 0039.scaffold00152 112871 2 TA .. scaffold985 ScafM SNP 0039.scaffold00152 114133 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 114188 2 AT CA scaffold7076 ScafM SNP 0039.scaffold00152 114208 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 114300 1 C G scaffold7076 ScafM SNP 0039.scaffold00152 114336 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 114406 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 114433 1 T C scaffold7076 ScafM INDEL 0039.scaffold00152 114762 2 TT .. scaffold7076 ScafM SNP 0039.scaffold00152 114799 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 115008 1 T C scaffold7076 ScafM INDEL 0039.scaffold00152 115104 2 .. TT scaffold7076 ScafM SNP 0039.scaffold00152 115182 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 115326 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 115359 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 115372 1 G T scaffold7076 ScafM SNP 0039.scaffold00152 115480 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 115527 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 115584 2 TG GA scaffold7076 ScafM SNP 0039.scaffold00152 117334 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 117348 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 117385 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 117388 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 117521 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 117623 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 117743 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 118510 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 118516 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 118664 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 118679 1 A T scaffold7076 ScafM INDEL 0039.scaffold00152 118716 1 . T scaffold7076 ScafM SNP 0039.scaffold00152 118746 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 118760 1 C A scaffold7076 ScafM SNP 0039.scaffold00152 118793 1 G C scaffold7076 ScafM SNP 0039.scaffold00152 118844 1 T C scaffold7076 ScafM INDEL 0039.scaffold00152 118943 1 A . scaffold7076 ScafM SNP 0039.scaffold00152 119751 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 120052 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 120093 2 AA CT scaffold7076 ScafM INDEL 0039.scaffold00152 120322 1 . A scaffold7076 ScafM INDEL 0039.scaffold00152 120345 2 .. AA scaffold7076 ScafM SNP 0039.scaffold00152 120347 1 C G scaffold7076 ScafM SNP 0039.scaffold00152 120367 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 120393 1 T G scaffold7076 ScafM INDEL 0039.scaffold00152 120416 7 ACAAGGC ....... scaffold7076 ScafM INDEL 0039.scaffold00152 120424 1 A . scaffold7076 ScafM INDEL 0039.scaffold00152 120558 1 T . scaffold7076 ScafM INDEL 0039.scaffold00152 120753 1 . T scaffold7076 ScafM SNP 0039.scaffold00152 122184 1 C T scaffold21406 ScafM SNP 0039.scaffold00152 122201 1 G T scaffold21406 ScafM INDEL 0039.scaffold00152 122363 47 ............................................... AGCAAAGCCTTTTGGCTGGTACCTCATCTTCATATACTCTCTTGCTA scaffold7076 ScafM SNP 0039.scaffold00152 124239 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 124690 1 T A scaffold7076 ScafM INDEL 0039.scaffold00152 127066 53 ..................................................... TTTCTCTTGGGATCTTGGATTTGCATGCAAATGATGGTTAGTGACCTGTAATG scaffold7076 ScafM INDEL 0039.scaffold00152 127071 4 .... TTTC scaffold7076 ScafM SNP 0039.scaffold00152 128201 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 128838 1 G T scaffold7076 ScafM INDEL 0039.scaffold00152 129149 1 . T scaffold7076 ScafM SNP 0039.scaffold00152 129682 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 129872 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 130165 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 132000 1 A T scaffold7076 ScafM SNP 0039.scaffold00152 132574 1 G A scaffold7076 ScafM INDEL 0039.scaffold00152 134087 31 AACAGCCTTTATCAGTTTGTACCCTCCCCCC ............................... scaffold7076 ScafM SNP 0039.scaffold00152 135241 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 135978 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 136002 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 136519 1 T A scaffold7076 ScafM INDEL 0039.scaffold00152 136708 59 ........................................................... CTTTATTGTCTGTTTCAAGTTTCTCTCTCTTTAATTGGCGTCATTAGAAGGGTGGACGG scaffold7076 ScafM SNP 0039.scaffold00152 136718 1 T C scaffold7076 ScafM INDEL 0039.scaffold00152 138570 1 . G scaffold7076 ScafM SNP 0039.scaffold00152 138902 1 G C scaffold7076 ScafM INDEL 0039.scaffold00152 139403 1 T . scaffold7076 ScafM SNP 0039.scaffold00152 139554 1 T G scaffold7076 ScafM SNP 0039.scaffold00152 139627 1 T A scaffold7076 ScafM SNP 0039.scaffold00152 141066 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 141140 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 141142 1 T A scaffold7076 ScafM SNP 0039.scaffold00152 141783 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 141875 1 A T scaffold7076 ScafM SNP 0039.scaffold00152 142530 1 G A scaffold7076 ScafM SNP 0039.scaffold00152 142857 1 T C scaffold7076 ScafM SNP 0039.scaffold00152 143435 1 C T scaffold7076 ScafM SNP 0039.scaffold00152 143588 1 A G scaffold7076 ScafM SNP 0039.scaffold00152 143979 1 C T scaffold7076 ReadM SNP 0039.scaffold00152 144283 1 C T - ScafM SNP 0039.scaffold00152 154267 1 G A scaffold2752 ReadM SNP 0039.scaffold00152 157232 1 T C - ScafM INDEL 0039.scaffold00152 157361 1 . T scaffold2752 ScafM INDEL 0039.scaffold00152 161710 1 C . scaffold2752 ScafM INDEL 0039.scaffold00152 182611 4 ATTG .... scaffold2752 ScafM INDEL 0039.scaffold00152 182632 1 . G scaffold2752 ScafM SNP 0039.scaffold00152 182634 1 A C scaffold2752 ScafM SNP 0039.scaffold00152 193161 1 T A scaffold2752 ScafM SNP 0039.scaffold00152 193163 1 A C scaffold2752 ScafM SNP 0039.scaffold00152 196114 1 C A scaffold2752 ScafM INDEL 0039.scaffold00152 196116 1 A . scaffold2752 ScafM INDEL 0039.scaffold00152 196508 1 . G scaffold2752 ScafM INDEL 0039.scaffold00152 216349 1 . A scaffold2752 ScafM SNP 0039.scaffold00152 221046 1 C A scaffold2752 ScafM SNP 0039.scaffold00152 240529 1 C T scaffold2752 ReadM SNP 0039.scaffold00152 242488 1 T C - ReadM INDEL 0039.scaffold00152 242814 1 . A - ScafM SNP 0039.scaffold00152 262436 1 T C scaffold30171 ScafM SNP 0039.scaffold00152 262439 1 A C scaffold30171 ScafM SNP 0039.scaffold00152 262825 1 C A scaffold30171 ScafM INDEL 0039.scaffold00152 262826 1 . A scaffold30171 ScafM INDEL 0039.scaffold00152 262834 1 A . scaffold30171 ScafM SNP 0039.scaffold00152 262837 1 A T scaffold30171 ScafM INDEL 0039.scaffold00152 262841 1 T . scaffold30171 ScafM INDEL 0039.scaffold00152 276331 1 . T scaffold30171 ScafM SNP 0039.scaffold00152 286717 1 A C scaffold18143 ScafM SNP 0039.scaffold00152 286724 1 A G scaffold18143 ScafM SNP 0039.scaffold00152 286778 1 A G scaffold18143 ScafM INDEL 0039.scaffold00152 286787 1 . A scaffold18143 ScafM SNP 0039.scaffold00152 293958 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 304765 7 GACGAGG TTTTTTT scaffold10169 ScafM SNP 0039.scaffold00152 304773 1 C T scaffold10169 ScafM SNP 0039.scaffold00152 304775 3 AGA TTT scaffold10169 ScafM SNP 0039.scaffold00152 304779 4 GAAG TTTT scaffold10169 ScafM SNP 0039.scaffold00152 304785 1 G T scaffold10169 ScafM SNP 0039.scaffold00152 304788 1 A T scaffold10169 Both SNP 0039.scaffold00152 314328 1 C A scaffold10169 Both SNP 0039.scaffold00152 314337 1 A G scaffold10169 Both SNP 0039.scaffold00152 314461 1 T C scaffold10169 Both SNP 0039.scaffold00152 314572 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 314611 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 314638 1 G A scaffold10169 Both SNP 0039.scaffold00152 314971 1 C T scaffold10169 ScafM INDEL 0039.scaffold00152 315512 2 .. TA scaffold10169 ScafM INDEL 0039.scaffold00152 315535 3 TCG ... scaffold10169 ScafM SNP 0039.scaffold00152 318565 1 T G scaffold30113 ScafM SNP 0039.scaffold00152 319069 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 319161 1 C G scaffold10169 ScafM SNP 0039.scaffold00152 319192 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 319200 1 G A scaffold10169 ScafM INDEL 0039.scaffold00152 319210 1 . A scaffold10169 ScafM SNP 0039.scaffold00152 319229 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 319245 1 G C scaffold10169 ScafM SNP 0039.scaffold00152 319252 1 C T scaffold10169 ScafM INDEL 0039.scaffold00152 319302 1 A . scaffold10169 ScafM SNP 0039.scaffold00152 319327 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 319368 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 319371 3 ... CAT scaffold10169 ScafM SNP 0039.scaffold00152 319373 1 A T scaffold10169 ScafM INDEL 0039.scaffold00152 320273 1 . A scaffold10169 ScafM SNP 0039.scaffold00152 320314 2 TG CA scaffold10169 ScafM INDEL 0039.scaffold00152 320415 2 .. AT scaffold10169 ScafM SNP 0039.scaffold00152 320434 1 G A scaffold10169 ScafM INDEL 0039.scaffold00152 320436 2 TT .. scaffold10169 ScafM SNP 0039.scaffold00152 320448 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 320461 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 323107 1 . T scaffold34737 ScafM SNP 0039.scaffold00152 323109 2 GG TA scaffold34737 ScafM SNP 0039.scaffold00152 323200 1 G A scaffold34737 ScafM SNP 0039.scaffold00152 323222 1 G T scaffold34737 ScafM SNP 0039.scaffold00152 323291 1 C A scaffold34737 ScafM SNP 0039.scaffold00152 323328 1 G A scaffold34737 ScafM SNP 0039.scaffold00152 323402 1 A C scaffold34737 ScafM INDEL 0039.scaffold00152 323425 1 A . scaffold34737 ScafM SNP 0039.scaffold00152 323474 1 C T scaffold34737 ScafM SNP 0039.scaffold00152 323479 1 G A scaffold34737 ScafM SNP 0039.scaffold00152 323488 1 A G scaffold34737 ScafM SNP 0039.scaffold00152 323520 1 T C scaffold34737 ScafM SNP 0039.scaffold00152 325199 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 325237 1 C T scaffold10169 ScafM INDEL 0039.scaffold00152 325242 1 . T scaffold10169 ScafM SNP 0039.scaffold00152 325295 1 C A scaffold10169 ScafM SNP 0039.scaffold00152 325410 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 325422 5 ..... TTTAA scaffold10169 ScafM INDEL 0039.scaffold00152 325480 1 . A scaffold10169 ScafM SNP 0039.scaffold00152 325488 1 C G scaffold10169 ScafM SNP 0039.scaffold00152 325500 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 325526 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 325535 1 C T scaffold10169 ScafM SNP 0039.scaffold00152 325544 1 C A scaffold10169 ScafM SNP 0039.scaffold00152 325557 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 325570 1 T . scaffold10169 ScafM SNP 0039.scaffold00152 325599 2 TT AG scaffold10169 ScafM INDEL 0039.scaffold00152 325601 1 . A scaffold10169 ScafM INDEL 0039.scaffold00152 325603 3 ... CAA scaffold10169 ScafM INDEL 0039.scaffold00152 325607 11 ........... GAATGTACAAA scaffold10169 ScafM INDEL 0039.scaffold00152 325608 1 . A scaffold10169 ScafM INDEL 0039.scaffold00152 325609 4 .... GAAA scaffold10169 ScafM INDEL 0039.scaffold00152 325611 2 .. CT scaffold10169 ScafM INDEL 0039.scaffold00152 325613 5 ..... TTGAT scaffold10169 ScafM INDEL 0039.scaffold00152 325615 1 . A scaffold10169 ScafM SNP 0039.scaffold00152 325617 1 C T scaffold10169 ScafM INDEL 0039.scaffold00152 325685 1 . T scaffold10169 ScafM SNP 0039.scaffold00152 325691 1 C A scaffold10169 ScafM INDEL 0039.scaffold00152 325701 2 TG .. scaffold10169 ScafM INDEL 0039.scaffold00152 325704 2 CA .. scaffold10169 ScafM INDEL 0039.scaffold00152 325707 4 TTGG .... scaffold10169 ScafM SNP 0039.scaffold00152 325783 1 A C scaffold10169 ScafM SNP 0039.scaffold00152 325785 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 325820 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 325824 1 C G scaffold10169 ScafM SNP 0039.scaffold00152 325924 1 T A scaffold10169 ScafM SNP 0039.scaffold00152 325932 2 TC AA scaffold10169 Both SNP 0039.scaffold00152 325985 1 G A scaffold10169 Both SNP 0039.scaffold00152 326007 1 A T scaffold10169 ReadM SNP 0039.scaffold00152 326236 1 A G - ReadM SNP 0039.scaffold00152 326325 1 G A - ReadM SNP 0039.scaffold00152 326547 1 C T - ReadM INDEL 0039.scaffold00152 326600 1 . T - ReadM SNP 0039.scaffold00152 326823 1 C A - ReadM SNP 0039.scaffold00152 326860 1 T C - ReadM SNP 0039.scaffold00152 326863 1 G A - ReadM INDEL 0039.scaffold00152 326947 3 ... TAA - ReadM SNP 0039.scaffold00152 326979 1 T C - ReadM SNP 0039.scaffold00152 327052 1 A T - ReadM SNP 0039.scaffold00152 327082 1 G A - Both SNP 0039.scaffold00152 327554 1 A T scaffold10169 Both SNP 0039.scaffold00152 327574 1 C A scaffold10169 Both SNP 0039.scaffold00152 327585 1 G A scaffold10169 ScafM INDEL 0039.scaffold00152 327631 9 ......... GAAAATAAT scaffold10169 ScafM SNP 0039.scaffold00152 327646 1 C T scaffold10169 ScafM SNP 0039.scaffold00152 327655 1 C T scaffold10169 ScafM SNP 0039.scaffold00152 327857 1 T A scaffold10169 Both SNP 0039.scaffold00152 327965 1 T C scaffold10169 Both SNP 0039.scaffold00152 327984 1 G C scaffold10169 Both SNP 0039.scaffold00152 328020 1 C G scaffold10169 Both SNP 0039.scaffold00152 328179 1 C G scaffold10169 ScafM INDEL 0039.scaffold00152 328250 53 GCTCCAATAAGTTAATACATAACATGACAATGTATATTCTCTTAAAATGCAGT ..................................................... scaffold10169 ScafM INDEL 0039.scaffold00152 328461 30 TATATGTTATTGGTAAAGGAACTAGAGATA .............................. scaffold10169 ScafM SNP 0039.scaffold00152 328501 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 328503 1 C A scaffold10169 Both SNP 0039.scaffold00152 328639 1 T C scaffold10169 Both SNP 0039.scaffold00152 328801 1 G A scaffold10169 Both SNP 0039.scaffold00152 328853 1 T C scaffold10169 Both SNP 0039.scaffold00152 328882 1 C T scaffold10169 ReadM SNP 0039.scaffold00152 328908 1 T A - ReadM SNP 0039.scaffold00152 328925 1 C G - ReadM SNP 0039.scaffold00152 329000 1 T C - ReadM SNP 0039.scaffold00152 329010 1 A G - ReadM SNP 0039.scaffold00152 329102 1 A G - ReadM SNP 0039.scaffold00152 329108 1 A G - ReadM SNP 0039.scaffold00152 329167 1 G A - ReadM SNP 0039.scaffold00152 330217 1 G A - ReadM SNP 0039.scaffold00152 330285 1 G A - ReadM SNP 0039.scaffold00152 330309 1 G A - ReadM SNP 0039.scaffold00152 330352 1 A T - ReadM SNP 0039.scaffold00152 330377 1 G A - ReadM SNP 0039.scaffold00152 330431 1 A G - ReadM SNP 0039.scaffold00152 330440 1 A G - ReadM SNP 0039.scaffold00152 330566 1 C T - ReadM SNP 0039.scaffold00152 330585 1 G A - ReadM INDEL 0039.scaffold00152 330657 1 A . - ScafM INDEL 0039.scaffold00152 330729 3 CGT ... scaffold10169 ScafM SNP 0039.scaffold00152 330733 1 C G scaffold10169 ScafM INDEL 0039.scaffold00152 330754 1 A . scaffold10169 Both INDEL 0039.scaffold00152 330877 1 A . scaffold10169 ScafM SNP 0039.scaffold00152 330882 1 A T scaffold10169 Both SNP 0039.scaffold00152 330898 1 A C scaffold10169 ScafM INDEL 0039.scaffold00152 330939 3 AAA ... scaffold10169 Both SNP 0039.scaffold00152 331183 1 G T scaffold10169 Both INDEL 0039.scaffold00152 331186 1 . A scaffold10169 ScafM INDEL 0039.scaffold00152 331217 1 . A scaffold10169 ScafM SNP 0039.scaffold00152 331219 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 331221 1 T G scaffold10169 ScafM SNP 0039.scaffold00152 331223 2 GT AG scaffold10169 ScafM SNP 0039.scaffold00152 331226 1 A T scaffold10169 Both INDEL 0039.scaffold00152 331301 1 . G scaffold10169 Both SNP 0039.scaffold00152 331314 1 A T scaffold10169 Both SNP 0039.scaffold00152 331375 1 G A scaffold10169 Both SNP 0039.scaffold00152 331397 1 C T scaffold10169 ScafM INDEL 0039.scaffold00152 331539 4 AGTA .... scaffold10169 Both SNP 0039.scaffold00152 331662 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 331700 6 ATTAAC ...... scaffold10169 ScafM SNP 0039.scaffold00152 331743 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 331799 3 AAC ... scaffold10169 ScafM SNP 0039.scaffold00152 331844 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 331872 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 331885 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 331893 2 TT GA scaffold10169 Both INDEL 0039.scaffold00152 331908 1 . A scaffold10169 Both SNP 0039.scaffold00152 331957 1 T C scaffold10169 Both SNP 0039.scaffold00152 331991 1 T C scaffold10169 Both SNP 0039.scaffold00152 332048 1 T A scaffold10169 ScafM INDEL 0039.scaffold00152 332055 4 AGAG .... scaffold10169 ReadM SNP 0039.scaffold00152 332635 1 G T - ReadM SNP 0039.scaffold00152 332712 1 T C - ReadM SNP 0039.scaffold00152 332737 1 G A - ScafM INDEL 0039.scaffold00152 332911 1 G . scaffold10169 ScafM SNP 0039.scaffold00152 332914 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 332917 1 C A scaffold10169 ScafM SNP 0039.scaffold00152 333083 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 333102 1 C T scaffold10169 ScafM SNP 0039.scaffold00152 333210 2 CA TG scaffold10169 ScafM SNP 0039.scaffold00152 333248 1 G C scaffold10169 ReadM SNP 0039.scaffold00152 333561 1 C T - ReadM SNP 0039.scaffold00152 333563 1 G T - Both SNP 0039.scaffold00152 334187 1 T G scaffold10169 Both SNP 0039.scaffold00152 334223 1 C T scaffold10169 Both SNP 0039.scaffold00152 334248 1 C G scaffold10169 Both SNP 0039.scaffold00152 334428 1 T A scaffold10169 Both SNP 0039.scaffold00152 334430 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 334469 1 A G scaffold10169 Both SNP 0039.scaffold00152 334489 1 A G scaffold10169 Both SNP 0039.scaffold00152 334512 1 G A scaffold10169 Both SNP 0039.scaffold00152 334526 1 G T scaffold10169 Both SNP 0039.scaffold00152 334609 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 334645 8 ........ TATTTGCA scaffold10169 Both SNP 0039.scaffold00152 334811 1 A G scaffold10169 Both SNP 0039.scaffold00152 334882 1 T G scaffold10169 Both SNP 0039.scaffold00152 334924 1 G T scaffold10169 Both SNP 0039.scaffold00152 335035 1 T C scaffold10169 Both INDEL 0039.scaffold00152 335042 1 T . scaffold10169 Both SNP 0039.scaffold00152 335240 1 T A scaffold10169 ScafM INDEL 0039.scaffold00152 335353 1 A . scaffold10169 ScafM INDEL 0039.scaffold00152 335398 13 TATGCGTGAGGAT ............. scaffold10169 ScafM SNP 0039.scaffold00152 335698 2 GG TA scaffold10169 ScafM SNP 0039.scaffold00152 335716 2 TC CT scaffold10169 ScafM SNP 0039.scaffold00152 335722 1 C T scaffold10169 ReadM SNP 0039.scaffold00152 335749 1 A G - ReadM SNP 0039.scaffold00152 335770 1 T C - ReadM SNP 0039.scaffold00152 335822 1 T C - ReadM SNP 0039.scaffold00152 336067 1 A C - Both SNP 0039.scaffold00152 336110 1 C T scaffold10169 Both INDEL 0039.scaffold00152 336175 1 C . scaffold10169 Both SNP 0039.scaffold00152 336185 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 336213 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 336232 1 T . scaffold10169 ScafM INDEL 0039.scaffold00152 336256 11 ........... TAGCATTTATG scaffold10169 ScafM SNP 0039.scaffold00152 336263 1 G A scaffold10169 Both SNP 0039.scaffold00152 336368 1 T A scaffold10169 ReadM SNP 0039.scaffold00152 336437 1 C A - ReadM SNP 0039.scaffold00152 336533 1 G A - ReadM SNP 0039.scaffold00152 336710 1 A G - ReadM SNP 0039.scaffold00152 336729 1 C T - ReadM INDEL 0039.scaffold00152 336803 1 G . - ReadM SNP 0039.scaffold00152 336885 1 T C - ScafM SNP 0039.scaffold00152 337011 1 T A scaffold10169 ScafM SNP 0039.scaffold00152 337105 1 T C scaffold10169 ReadM SNP 0039.scaffold00152 337818 1 G T - ReadM SNP 0039.scaffold00152 337827 1 C G - ReadM INDEL 0039.scaffold00152 337948 1 C . - ReadM SNP 0039.scaffold00152 338010 1 G T - ReadM SNP 0039.scaffold00152 338029 1 A T - ReadM INDEL 0039.scaffold00152 338044 1 . C - ReadM SNP 0039.scaffold00152 338268 1 C G - ReadM SNP 0039.scaffold00152 338396 1 G T - ReadM SNP 0039.scaffold00152 338522 1 A G - ReadM SNP 0039.scaffold00152 338734 1 A G - ReadM SNP 0039.scaffold00152 338738 1 A C - ReadM SNP 0039.scaffold00152 338766 1 T A - ReadM SNP 0039.scaffold00152 338827 1 G A - ReadM SNP 0039.scaffold00152 338949 1 T G - ReadM SNP 0039.scaffold00152 339043 1 A G - ReadM SNP 0039.scaffold00152 339054 1 C T - ReadM SNP 0039.scaffold00152 339061 1 T C - ReadM INDEL 0039.scaffold00152 339276 1 . A - ReadM SNP 0039.scaffold00152 339375 1 C T - ReadM SNP 0039.scaffold00152 339404 1 C T - Both INDEL 0039.scaffold00152 339420 1 A . scaffold10169 Both SNP 0039.scaffold00152 339458 1 T C scaffold10169 Both SNP 0039.scaffold00152 339504 1 G A scaffold10169 Both SNP 0039.scaffold00152 339521 1 T G scaffold10169 Both SNP 0039.scaffold00152 339686 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 339744 4 TACA .... scaffold10169 Both SNP 0039.scaffold00152 339823 1 T C scaffold10169 Both SNP 0039.scaffold00152 339859 1 T C scaffold10169 Both SNP 0039.scaffold00152 339882 1 C T scaffold10169 Both SNP 0039.scaffold00152 340163 1 G T scaffold10169 Both SNP 0039.scaffold00152 340186 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 340431 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 340433 7 ATCCATA ....... scaffold10169 ScafM SNP 0039.scaffold00152 340494 1 A G scaffold10169 ScafM INDEL 0039.scaffold00152 340789 1 A . scaffold10169 ScafM SNP 0039.scaffold00152 341161 1 C A scaffold10169 ReadM SNP 0039.scaffold00152 341353 1 T C - ReadM INDEL 0039.scaffold00152 341374 1 T . - ReadM SNP 0039.scaffold00152 341417 1 C T - ReadM SNP 0039.scaffold00152 341444 1 A T - ReadM INDEL 0039.scaffold00152 341505 1 . T - ScafM SNP 0039.scaffold00152 341730 1 C G scaffold10169 ScafM SNP 0039.scaffold00152 341751 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 343414 1 A T scaffold19096 ReadM INDEL 0039.scaffold00152 343500 2 .. TC - Both SNP 0039.scaffold00152 343625 1 A C scaffold10169 Both SNP 0039.scaffold00152 343635 1 A G scaffold10169 Both SNP 0039.scaffold00152 343697 1 C T scaffold10169 Both SNP 0039.scaffold00152 343761 1 A G scaffold10169 Both SNP 0039.scaffold00152 343803 1 T A scaffold10169 Both SNP 0039.scaffold00152 343873 1 T C scaffold10169 Both SNP 0039.scaffold00152 343938 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 344102 3 ... TTT scaffold10169 Both SNP 0039.scaffold00152 344195 1 G A scaffold10169 Both INDEL 0039.scaffold00152 344227 1 C . scaffold10169 ScafM SNP 0039.scaffold00152 344302 1 C G scaffold10169 ReadM SNP 0039.scaffold00152 344433 1 T C - ReadM SNP 0039.scaffold00152 344491 1 G T - ReadM SNP 0039.scaffold00152 344613 1 C T - ReadM SNP 0039.scaffold00152 344650 1 G A - ReadM SNP 0039.scaffold00152 344664 1 T C - ReadM SNP 0039.scaffold00152 344997 1 G A - ReadM SNP 0039.scaffold00152 345055 1 T G - ReadM SNP 0039.scaffold00152 345096 1 G A - ReadM SNP 0039.scaffold00152 345962 1 T A - ReadM SNP 0039.scaffold00152 346038 1 A G - ScafM INDEL 0039.scaffold00152 352980 32 ................................ AAAAAGCTTAAACAGATAGTTTTTTTTTGAAG scaffold10169 ScafM SNP 0039.scaffold00152 353044 1 G A scaffold10169 ScafM SNP 0039.scaffold00152 353108 1 T C scaffold10169 ScafM SNP 0039.scaffold00152 353468 1 T C scaffold10169 ScafM INDEL 0039.scaffold00152 353477 1 . C scaffold10169 ScafM SNP 0039.scaffold00152 353480 1 A G scaffold10169 ScafM SNP 0039.scaffold00152 353486 1 T G scaffold10169 ScafM SNP 0039.scaffold00152 355054 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 355062 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 355074 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355083 1 A C scaffold21594 ScafM SNP 0039.scaffold00152 355095 1 A T scaffold21594 ScafM SNP 0039.scaffold00152 355107 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355134 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 355141 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355172 1 G A scaffold21594 ScafM INDEL 0039.scaffold00152 355191 1 G . scaffold21594 ScafM SNP 0039.scaffold00152 355199 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 355256 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355262 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355281 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 355285 1 A G scaffold21594 ScafM INDEL 0039.scaffold00152 355301 2 .C GA scaffold21594 ScafM SNP 0039.scaffold00152 355316 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355393 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355417 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355422 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355424 2 GA AC scaffold21594 ScafM SNP 0039.scaffold00152 355434 1 C G scaffold21594 ScafM SNP 0039.scaffold00152 355441 2 GT AG scaffold21594 ScafM SNP 0039.scaffold00152 355444 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355457 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 355461 1 T A scaffold21594 ScafM SNP 0039.scaffold00152 355491 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355498 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355507 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355514 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 355519 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 355534 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355555 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355558 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 355560 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 355574 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 355578 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 355611 1 A C scaffold21594 ScafM SNP 0039.scaffold00152 355656 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 355669 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 355673 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 355676 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 355692 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 355709 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 355718 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355721 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 355724 1 T C scaffold21594 ScafM INDEL 0039.scaffold00152 355734 1 . A scaffold21594 ScafM INDEL 0039.scaffold00152 355746 3 ... TAA scaffold21594 ScafM INDEL 0039.scaffold00152 355749 1 . C scaffold21594 ScafM SNP 0039.scaffold00152 355766 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355775 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 355777 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 355800 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355829 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 355834 1 C T scaffold21594 ScafM INDEL 0039.scaffold00152 355853 1 . A scaffold21594 ScafM SNP 0039.scaffold00152 355869 1 C G scaffold21594 ScafM SNP 0039.scaffold00152 355898 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 355903 1 C T scaffold21594 ScafM INDEL 0039.scaffold00152 355904 1 . T scaffold21594 ScafM INDEL 0039.scaffold00152 355905 4 .... TTGG scaffold21594 ScafM SNP 0039.scaffold00152 355927 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 355996 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 356015 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 356020 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 356050 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 356095 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 356103 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 356118 1 C G scaffold21594 ScafM SNP 0039.scaffold00152 356121 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 356130 2 CA TG scaffold21594 ScafM SNP 0039.scaffold00152 356135 1 A T scaffold21594 ScafM SNP 0039.scaffold00152 356141 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 356158 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 356181 1 A C scaffold21594 ScafM SNP 0039.scaffold00152 356208 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 356217 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 356237 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 356261 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 356266 1 C A scaffold21594 ScafM SNP 0039.scaffold00152 356286 1 T A scaffold21594 ScafM SNP 0039.scaffold00152 356292 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 356294 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 360484 1 A C scaffold57748 ScafM SNP 0039.scaffold00152 360486 1 C A scaffold57748 ScafM SNP 0039.scaffold00152 360506 1 A G scaffold57748 ScafM SNP 0039.scaffold00152 360512 1 T C scaffold57748 ScafM SNP 0039.scaffold00152 360547 1 T C scaffold57748 ScafM INDEL 0039.scaffold00152 360554 1 . A scaffold57748 ScafM SNP 0039.scaffold00152 360596 1 A T scaffold57748 ScafM SNP 0039.scaffold00152 363031 1 G T scaffold21594 ScafM SNP 0039.scaffold00152 363037 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 363041 1 A C scaffold21594 ScafM INDEL 0039.scaffold00152 363075 3 ... GCA scaffold21594 ScafM INDEL 0039.scaffold00152 363076 2 .. GC scaffold21594 ScafM INDEL 0039.scaffold00152 363078 7 ....... GCAATAC scaffold21594 ScafM INDEL 0039.scaffold00152 363080 1 . G scaffold21594 ScafM SNP 0039.scaffold00152 363139 1 C T scaffold21594 ScafM INDEL 0039.scaffold00152 363169 8 CATTCACC ........ scaffold21594 ScafM SNP 0039.scaffold00152 363250 1 G C scaffold21594 ScafM SNP 0039.scaffold00152 363252 1 C T scaffold21594 ScafM SNP 0039.scaffold00152 363282 1 G A scaffold21594 ScafM SNP 0039.scaffold00152 363284 2 AA TC scaffold21594 ScafM SNP 0039.scaffold00152 363310 1 A G scaffold21594 ScafM SNP 0039.scaffold00152 363324 1 C T scaffold21594 ScafM INDEL 0039.scaffold00152 363328 5 ..... TCCAA scaffold21594 ScafM SNP 0039.scaffold00152 363354 1 A T scaffold21594 ScafM SNP 0039.scaffold00152 363389 1 T C scaffold21594 ScafM SNP 0039.scaffold00152 363397 1 T G scaffold21594 ScafM SNP 0039.scaffold00152 363404 2 GT TC scaffold21594 ScafM INDEL 0039.scaffold00152 363408 1 . T scaffold21594 Both SNP 0039.scaffold00152 363485 1 T C scaffold21594 Both SNP 0039.scaffold00152 363501 1 G C scaffold21594 Both SNP 0039.scaffold00152 363508 1 A T scaffold21594 Both SNP 0039.scaffold00152 363538 1 T C scaffold21594 Both SNP 0039.scaffold00152 363638 1 T C scaffold21594 Both SNP 0039.scaffold00152 363673 1 A T scaffold21594 ScafM SNP 0039.scaffold00152 363803 1 A T scaffold21594 ScafM SNP 0039.scaffold00152 364126 1 C T scaffold21594 ScafM INDEL 0039.scaffold00152 364187 3 TAC ... scaffold21594 Both SNP 0039.scaffold00152 364660 1 T C scaffold34315 Both SNP 0039.scaffold00152 364678 1 T C scaffold34315 ScafM INDEL 0039.scaffold00152 364755 20 .................... GTCGTTCTTCTCCTCCGTCG scaffold34315 ScafM SNP 0039.scaffold00152 364775 2 AT GG scaffold34315 ScafM SNP 0039.scaffold00152 364802 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 364804 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 364829 1 A G scaffold34315 ScafM SNP 0039.scaffold00152 364853 1 G A scaffold34315 ScafM INDEL 0039.scaffold00152 364883 8 ........ TTTATTTT scaffold34315 ReadM SNP 0039.scaffold00152 365032 1 A C - ScafM SNP 0039.scaffold00152 366078 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 366394 1 C T scaffold34315 ReadM SNP 0039.scaffold00152 366763 1 A C - ReadM SNP 0039.scaffold00152 366782 1 A G - ScafM SNP 0039.scaffold00152 366865 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 366899 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 366919 1 A C scaffold34315 ScafM SNP 0039.scaffold00152 367045 1 T C scaffold34315 ScafM SNP 0039.scaffold00152 368265 1 A G scaffold34315 ScafM SNP 0039.scaffold00152 368442 1 A G scaffold34315 ScafM SNP 0039.scaffold00152 368486 1 T C scaffold34315 ScafM SNP 0039.scaffold00152 368513 1 A G scaffold34315 ScafM SNP 0039.scaffold00152 368521 1 G A scaffold34315 ScafM SNP 0039.scaffold00152 368529 1 C T scaffold34315 ScafM SNP 0039.scaffold00152 368545 1 A T scaffold34315 ScafM SNP 0039.scaffold00152 368554 1 A C scaffold34315 ScafM SNP 0039.scaffold00152 368564 1 T C scaffold34315 ScafM SNP 0039.scaffold00152 368818 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 368877 2 GG .. scaffold8785 ScafM SNP 0039.scaffold00152 368881 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 368922 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 368964 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 369007 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 369023 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 369025 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 369064 2 CA TG scaffold8785 ScafM SNP 0039.scaffold00152 369085 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 369106 1 T C scaffold8785 ReadM SNP 0039.scaffold00152 369212 1 C T - ReadM SNP 0039.scaffold00152 369350 1 G A - ReadM SNP 0039.scaffold00152 369450 1 A G - ReadM SNP 0039.scaffold00152 369460 1 A G - ReadM SNP 0039.scaffold00152 369543 1 C A - Both SNP 0039.scaffold00152 369662 1 G T scaffold8785 Both SNP 0039.scaffold00152 369685 1 A C scaffold8785 Both SNP 0039.scaffold00152 369786 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 369902 2 GG AA scaffold8785 Both SNP 0039.scaffold00152 369933 1 C T scaffold8785 Both SNP 0039.scaffold00152 370000 1 A G scaffold8785 Both SNP 0039.scaffold00152 370021 1 A G scaffold8785 Both SNP 0039.scaffold00152 370158 1 A G scaffold8785 Both SNP 0039.scaffold00152 370163 1 T C scaffold8785 Both SNP 0039.scaffold00152 370166 1 G A scaffold8785 Both SNP 0039.scaffold00152 370208 1 C T scaffold8785 Both SNP 0039.scaffold00152 370226 1 A C scaffold8785 Both SNP 0039.scaffold00152 370271 1 C T scaffold8785 Both SNP 0039.scaffold00152 370679 1 C T scaffold8785 Both SNP 0039.scaffold00152 370696 1 G T scaffold8785 Both SNP 0039.scaffold00152 370726 1 G A scaffold8785 ReadM SNP 0039.scaffold00152 370790 1 T G - Both SNP 0039.scaffold00152 370859 1 A T scaffold8785 Both SNP 0039.scaffold00152 370988 1 C T scaffold8785 Both INDEL 0039.scaffold00152 370999 1 A . scaffold8785 Both SNP 0039.scaffold00152 371026 1 G A scaffold8785 Both SNP 0039.scaffold00152 371146 1 C T scaffold8785 Both SNP 0039.scaffold00152 371187 1 G A scaffold8785 Both SNP 0039.scaffold00152 371191 1 C T scaffold8785 Both SNP 0039.scaffold00152 371211 1 A C scaffold8785 Both SNP 0039.scaffold00152 371241 1 T A scaffold8785 Both SNP 0039.scaffold00152 371246 1 G A scaffold8785 Both SNP 0039.scaffold00152 371327 1 C G scaffold8785 Both SNP 0039.scaffold00152 371359 1 A G scaffold8785 Both SNP 0039.scaffold00152 371403 1 G A scaffold8785 Both SNP 0039.scaffold00152 371444 1 A G scaffold8785 ReadM SNP 0039.scaffold00152 371553 1 A T - ReadM SNP 0039.scaffold00152 371557 1 T C - ReadM SNP 0039.scaffold00152 371593 1 A T - ReadM SNP 0039.scaffold00152 371602 1 G A - ReadM SNP 0039.scaffold00152 371622 1 G A - ReadM SNP 0039.scaffold00152 371674 1 T A - ReadM SNP 0039.scaffold00152 371807 1 G T - ReadM SNP 0039.scaffold00152 371810 1 G A - Both SNP 0039.scaffold00152 371855 1 A G scaffold8785 ReadM SNP 0039.scaffold00152 371878 1 C A - ReadM SNP 0039.scaffold00152 372031 1 T C - Both SNP 0039.scaffold00152 372074 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 372139 1 G T scaffold8785 Both SNP 0039.scaffold00152 372289 1 G A scaffold8785 Both SNP 0039.scaffold00152 372385 1 G C scaffold8785 Both SNP 0039.scaffold00152 372440 1 T G scaffold8785 ScafM INDEL 0039.scaffold00152 372730 6 GTTCAA ...... scaffold8785 ScafM INDEL 0039.scaffold00152 372740 15 CATATTCTACCTGTC ............... scaffold8785 ScafM INDEL 0039.scaffold00152 372767 2 GT .. scaffold8785 ScafM SNP 0039.scaffold00152 372875 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 373515 1 G T scaffold8785 ScafM SNP 0039.scaffold00152 373526 1 A T scaffold8785 ScafM SNP 0039.scaffold00152 373612 1 G C scaffold8785 ScafM INDEL 0039.scaffold00152 373631 13 ............. AGAAAAAATAAAG scaffold8785 ScafM SNP 0039.scaffold00152 373643 1 T A scaffold8785 ScafM SNP 0039.scaffold00152 373943 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 373953 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 373991 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 374006 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 374054 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 374073 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 374112 1 T C scaffold8785 ReadM SNP 0039.scaffold00152 374223 1 T C - ReadM SNP 0039.scaffold00152 374270 1 C T - ReadM SNP 0039.scaffold00152 374281 1 A T - ReadM SNP 0039.scaffold00152 374309 1 G A - ReadM SNP 0039.scaffold00152 374344 1 A C - ScafM SNP 0039.scaffold00152 374455 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 374460 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 374482 20 TATGGGGCGGGACGGGCGGA .................... scaffold8785 ScafM SNP 0039.scaffold00152 374561 1 T C scaffold8785 ScafM INDEL 0039.scaffold00152 374576 16 CACCCACTACCCACCA ................ scaffold8785 Both SNP 0039.scaffold00152 374666 1 A C scaffold8785 ReadM SNP 0039.scaffold00152 374712 1 A G - ReadM SNP 0039.scaffold00152 374736 1 C A - ReadM SNP 0039.scaffold00152 374752 1 G A - ReadM SNP 0039.scaffold00152 374875 1 T A - ReadM SNP 0039.scaffold00152 374893 1 C T - ScafM SNP 0039.scaffold00152 375283 1 G T scaffold8785 ScafM SNP 0039.scaffold00152 375510 1 T A scaffold8785 ScafM SNP 0039.scaffold00152 375620 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 378464 1 A C scaffold8785 ScafM SNP 0039.scaffold00152 378753 1 A T scaffold8785 ScafM SNP 0039.scaffold00152 378757 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 378806 1 A . scaffold8785 ScafM SNP 0039.scaffold00152 378888 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 378923 1 A . scaffold8785 ScafM SNP 0039.scaffold00152 378926 1 T C scaffold8785 Both SNP 0039.scaffold00152 379077 1 C A scaffold8785 Both SNP 0039.scaffold00152 379144 1 T C scaffold8785 Both SNP 0039.scaffold00152 379194 1 T G scaffold8785 Both SNP 0039.scaffold00152 379528 1 G A scaffold8785 Both SNP 0039.scaffold00152 379531 1 C T scaffold8785 Both SNP 0039.scaffold00152 379582 1 G A scaffold8785 Both SNP 0039.scaffold00152 379660 1 A T scaffold8785 Both SNP 0039.scaffold00152 379704 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 379844 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 379864 1 . T scaffold8785 ScafM INDEL 0039.scaffold00152 380133 1 A . scaffold8785 ScafM INDEL 0039.scaffold00152 380153 1 . C scaffold8785 ScafM INDEL 0039.scaffold00152 380155 2 .C AT scaffold8785 ScafM INDEL 0039.scaffold00152 380162 3 ... TTT scaffold8785 ScafM SNP 0039.scaffold00152 380163 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 380174 1 C T scaffold8785 ScafM INDEL 0039.scaffold00152 380187 1 C . scaffold8785 ScafM SNP 0039.scaffold00152 380195 1 C A scaffold8785 ReadM SNP 0039.scaffold00152 380292 1 T C - ScafM INDEL 0039.scaffold00152 382760 5 ..... TAGAT scaffold8785 ScafM SNP 0039.scaffold00152 382812 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 382815 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 382839 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 382875 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 382913 3 ... AAT scaffold8785 ScafM INDEL 0039.scaffold00152 382917 1 . T scaffold8785 ScafM INDEL 0039.scaffold00152 382918 3 ... TCC scaffold8785 ScafM SNP 0039.scaffold00152 382922 1 G T scaffold8785 ScafM INDEL 0039.scaffold00152 382923 2 .. CT scaffold8785 ScafM INDEL 0039.scaffold00152 382926 3 ... CTC scaffold8785 ScafM SNP 0039.scaffold00152 382999 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 383140 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 383184 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 383207 1 G T scaffold8785 ScafM SNP 0039.scaffold00152 383228 1 A T scaffold8785 ScafM SNP 0039.scaffold00152 383231 1 A T scaffold8785 ScafM INDEL 0039.scaffold00152 383235 5 ..... TTCAA scaffold8785 ScafM SNP 0039.scaffold00152 383258 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 383269 1 T G scaffold8785 ScafM SNP 0039.scaffold00152 383286 1 T G scaffold8785 ScafM SNP 0039.scaffold00152 383335 1 T C scaffold8785 ScafM INDEL 0039.scaffold00152 383351 9 AAAAAAAAG ......... scaffold8785 ScafM SNP 0039.scaffold00152 383379 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 383381 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 383387 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 383397 1 A C scaffold8785 ScafM SNP 0039.scaffold00152 383417 1 A C scaffold8785 ScafM SNP 0039.scaffold00152 383445 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 383457 1 G T scaffold8785 ScafM SNP 0039.scaffold00152 383483 1 G A scaffold8785 Both SNP 0039.scaffold00152 383548 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 383969 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 384012 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 384020 2 AA GG scaffold8785 ScafM SNP 0039.scaffold00152 384040 1 A T scaffold8785 ScafM SNP 0039.scaffold00152 384059 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 384061 1 A C scaffold8785 ScafM SNP 0039.scaffold00152 384073 1 A T scaffold8785 ScafM SNP 0039.scaffold00152 384079 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 386199 1 T A scaffold8785 ScafM SNP 0039.scaffold00152 386234 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 386240 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 386247 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 386260 1 . T scaffold8785 ScafM SNP 0039.scaffold00152 386262 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 386287 4 AAAA ...C scaffold8785 ScafM SNP 0039.scaffold00152 386346 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 386351 1 G T scaffold8785 ScafM SNP 0039.scaffold00152 386556 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 386558 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 386577 1 . T scaffold8785 ScafM INDEL 0039.scaffold00152 386668 1 T . scaffold8785 ScafM SNP 0039.scaffold00152 386988 1 A T scaffold8785 ScafM INDEL 0039.scaffold00152 387003 1 A . scaffold8785 ScafM INDEL 0039.scaffold00152 387007 1 G . scaffold8785 ScafM SNP 0039.scaffold00152 387018 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 387043 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 387075 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 387080 4 .... CCGG scaffold8785 ScafM SNP 0039.scaffold00152 387087 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 387154 1 G A scaffold8785 ScafM INDEL 0039.scaffold00152 387162 5 TGTAC ..... scaffold8785 ScafM SNP 0039.scaffold00152 387199 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 387227 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 387242 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 387303 4 ACAC .... scaffold8785 ScafM INDEL 0039.scaffold00152 387316 1 T . scaffold8785 ScafM SNP 0039.scaffold00152 391336 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 391340 1 . A scaffold8785 ScafM SNP 0039.scaffold00152 391360 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 391385 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 391398 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 391473 1 C T scaffold8785 ScafM SNP 0039.scaffold00152 391480 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 391500 1 A G scaffold8785 ScafM SNP 0039.scaffold00152 391550 1 G A scaffold8785 ScafM SNP 0039.scaffold00152 392334 1 C A scaffold8785 ScafM SNP 0039.scaffold00152 392531 1 A C scaffold8785 Both SNP 0039.scaffold00152 392819 1 G T scaffold8785 Both SNP 0039.scaffold00152 392832 1 C T scaffold8785 Both SNP 0039.scaffold00152 392948 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 392963 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 392980 1 G A scaffold8785 Both SNP 0039.scaffold00152 392998 1 G C scaffold8785 Both SNP 0039.scaffold00152 393019 1 C T scaffold8785 Both SNP 0039.scaffold00152 393038 1 A G scaffold8785 ScafM INDEL 0039.scaffold00152 393115 3 ... TTT scaffold8785 ScafM SNP 0039.scaffold00152 393140 2 CA AG scaffold8785 Both SNP 0039.scaffold00152 393186 1 C T scaffold8785 ScafM INDEL 0039.scaffold00152 393278 6 ACTTTT ...... scaffold8785 ScafM SNP 0039.scaffold00152 393315 1 C A scaffold8785 ScafM INDEL 0039.scaffold00152 393359 1 . C scaffold8785 ReadM SNP 0039.scaffold00152 394186 1 A T - ReadM SNP 0039.scaffold00152 394334 1 A T - ReadM SNP 0039.scaffold00152 394360 1 T C - ReadM SNP 0039.scaffold00152 394446 1 C A - ReadM SNP 0039.scaffold00152 394495 1 T C - ReadM SNP 0039.scaffold00152 394547 1 T C - ReadM SNP 0039.scaffold00152 394628 1 A G - Both SNP 0039.scaffold00152 394727 1 A T scaffold8785 ScafM INDEL 0039.scaffold00152 394781 9 ......... CCCCATTAT scaffold8785 ScafM SNP 0039.scaffold00152 394822 1 C G scaffold8785 ScafM INDEL 0039.scaffold00152 394834 3 ... ATT scaffold8785 ScafM INDEL 0039.scaffold00152 394836 1 . C scaffold8785 ScafM SNP 0039.scaffold00152 394845 1 T C scaffold8785 ScafM SNP 0039.scaffold00152 394935 1 C G scaffold8785 ScafM SNP 0039.scaffold00152 395057 1 G C scaffold8785 ScafM SNP 0039.scaffold00152 395120 1 A G scaffold8785 ReadM SNP 0039.scaffold00152 397345 1 T C - ReadM SNP 0039.scaffold00152 397773 1 G A - ScafM SNP 0039.scaffold00152 398406 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 398449 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 398456 1 G C scaffold9754 ScafM SNP 0039.scaffold00152 398474 1 C A scaffold9754 ScafM SNP 0039.scaffold00152 398510 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 398522 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 398559 1 G A scaffold9754 ScafM SNP 0039.scaffold00152 398917 1 G C scaffold9754 ScafM SNP 0039.scaffold00152 407208 1 T G scaffold9754 ScafM SNP 0039.scaffold00152 407310 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 407314 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 407347 1 G A scaffold9754 ScafM SNP 0039.scaffold00152 407371 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 407383 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 407401 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 407506 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 407557 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 407576 2 AG CA scaffold9754 ScafM INDEL 0039.scaffold00152 407598 8 ........ TTTTTTTT scaffold9754 ScafM SNP 0039.scaffold00152 407600 1 G T scaffold9754 ScafM SNP 0039.scaffold00152 407624 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 407636 1 T C scaffold9754 ReadM SNP 0039.scaffold00152 407926 1 T G - ReadM SNP 0039.scaffold00152 407945 1 G C - ReadM SNP 0039.scaffold00152 407983 1 T A - ReadM SNP 0039.scaffold00152 408072 1 T G - ReadM SNP 0039.scaffold00152 408105 1 G A - Both SNP 0039.scaffold00152 408129 1 G T scaffold9754 ScafM INDEL 0039.scaffold00152 408176 1 . G scaffold9754 ReadM SNP 0039.scaffold00152 408333 1 G A - ReadM SNP 0039.scaffold00152 408340 1 A T - ReadM SNP 0039.scaffold00152 408400 1 C T - ReadM SNP 0039.scaffold00152 408498 1 C A - ReadM SNP 0039.scaffold00152 408509 1 T C - ReadM SNP 0039.scaffold00152 408540 1 G A - ReadM SNP 0039.scaffold00152 408560 1 T G - ReadM SNP 0039.scaffold00152 408641 1 A T - ReadM SNP 0039.scaffold00152 408662 1 A C - ReadM SNP 0039.scaffold00152 408826 1 A C - ReadM SNP 0039.scaffold00152 408918 1 C T - ReadM SNP 0039.scaffold00152 408976 1 C T - ReadM SNP 0039.scaffold00152 408986 1 T C - ScafM SNP 0039.scaffold00152 409153 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 409179 2 AT TC scaffold9754 ScafM SNP 0039.scaffold00152 409249 1 A T scaffold9754 ScafM SNP 0039.scaffold00152 409251 2 AC GT scaffold9754 ScafM SNP 0039.scaffold00152 409326 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 409343 1 T G scaffold9754 ScafM INDEL 0039.scaffold00152 409348 2 .. AA scaffold9754 ScafM INDEL 0039.scaffold00152 409361 3 AAT ... scaffold9754 ScafM SNP 0039.scaffold00152 409378 1 A C scaffold9754 ScafM SNP 0039.scaffold00152 409393 1 A T scaffold9754 ScafM SNP 0039.scaffold00152 409414 1 T A scaffold9754 ScafM INDEL 0039.scaffold00152 409467 2 TT .. scaffold9754 ScafM INDEL 0039.scaffold00152 409514 1 T . scaffold9754 ScafM SNP 0039.scaffold00152 409537 1 A G scaffold9754 ScafM INDEL 0039.scaffold00152 409562 11 ........... TAGTAATTTTA scaffold9754 ScafM SNP 0039.scaffold00152 409588 1 G T scaffold9754 ScafM SNP 0039.scaffold00152 409611 1 A G scaffold9754 Both SNP 0039.scaffold00152 409658 1 G C scaffold9754 Both SNP 0039.scaffold00152 409672 1 G A scaffold9754 Both SNP 0039.scaffold00152 409694 1 C T scaffold9754 Both SNP 0039.scaffold00152 409729 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 409801 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 409823 2 CT AC scaffold9754 ScafM SNP 0039.scaffold00152 409828 1 T C scaffold9754 ScafM SNP 0039.scaffold00152 409872 1 G A scaffold9754 ScafM INDEL 0039.scaffold00152 409887 3 ... AGC scaffold9754 Both SNP 0039.scaffold00152 409909 1 G T scaffold9754 Both SNP 0039.scaffold00152 409957 1 G T scaffold9754 Both SNP 0039.scaffold00152 410041 1 T A scaffold9754 ScafM SNP 0039.scaffold00152 410056 2 CC AG scaffold9754 Both SNP 0039.scaffold00152 410134 1 C A scaffold9754 Both SNP 0039.scaffold00152 410188 1 G A scaffold9754 Both SNP 0039.scaffold00152 410197 1 A C scaffold9754 Both SNP 0039.scaffold00152 410273 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 410353 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 410377 1 G T scaffold9754 Both SNP 0039.scaffold00152 410384 1 T A scaffold9754 Both SNP 0039.scaffold00152 410437 1 A G scaffold9754 Both SNP 0039.scaffold00152 410502 1 G A scaffold9754 ReadM SNP 0039.scaffold00152 410574 1 G A - ReadM SNP 0039.scaffold00152 410609 1 G T - ReadM SNP 0039.scaffold00152 410690 1 A T - ReadM SNP 0039.scaffold00152 410699 1 C T - ReadM SNP 0039.scaffold00152 410733 1 T G - Both SNP 0039.scaffold00152 410776 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 410788 1 A G scaffold9754 ScafM SNP 0039.scaffold00152 410822 1 T G scaffold9754 Both SNP 0039.scaffold00152 410851 1 A C scaffold9754 Both SNP 0039.scaffold00152 410950 1 C A scaffold9754 Both INDEL 0039.scaffold00152 411026 1 . T scaffold9754 Both SNP 0039.scaffold00152 411070 1 T C scaffold9754 Both SNP 0039.scaffold00152 411104 1 C A scaffold9754 Both SNP 0039.scaffold00152 411147 1 A G scaffold9754 Both INDEL 0039.scaffold00152 411155 1 A . scaffold9754 Both SNP 0039.scaffold00152 411188 1 G C scaffold9754 Both SNP 0039.scaffold00152 411259 1 A G scaffold9754 Both SNP 0039.scaffold00152 411333 1 G A scaffold9754 Both SNP 0039.scaffold00152 411340 1 T G scaffold9754 Both SNP 0039.scaffold00152 411440 1 G T scaffold9754 ScafM INDEL 0039.scaffold00152 411504 2 TT .. scaffold9754 ScafM SNP 0039.scaffold00152 411521 1 A C scaffold9754 ScafM INDEL 0039.scaffold00152 411526 4 .... TTAA scaffold9754 ScafM SNP 0039.scaffold00152 411670 1 T A scaffold9754 ScafM SNP 0039.scaffold00152 411690 1 G A scaffold9754 ScafM SNP 0039.scaffold00152 411724 1 T G scaffold9754 ScafM SNP 0039.scaffold00152 411849 1 G C scaffold9754 ScafM INDEL 0039.scaffold00152 411941 1 T . scaffold9754 ScafM SNP 0039.scaffold00152 411974 1 C T scaffold9754 ScafM SNP 0039.scaffold00152 412046 2 AT TC scaffold9754 ScafM SNP 0039.scaffold00152 412074 1 T A scaffold9754 ScafM SNP 0039.scaffold00152 413068 1 T A scaffold31880 ScafM SNP 0039.scaffold00152 413120 1 T A scaffold31880 ScafM SNP 0039.scaffold00152 413148 1 A G scaffold31880 ScafM SNP 0039.scaffold00152 413164 1 T A scaffold31880 ScafM SNP 0039.scaffold00152 413179 1 G T scaffold31880 ScafM SNP 0039.scaffold00152 413199 1 C A scaffold31880 ScafM INDEL 0039.scaffold00152 413212 8 ........ CCGAGAAA scaffold31880 ScafM INDEL 0039.scaffold00152 413215 7 ....... CCAGCGA scaffold31880 Both SNP 0039.scaffold00152 414125 1 T C scaffold9754 ReadM SNP 0039.scaffold00152 414146 1 T A - ReadM SNP 0039.scaffold00152 414156 1 A G - ReadM SNP 0039.scaffold00152 414229 1 C T - ReadM SNP 0039.scaffold00152 414253 1 G T - ReadM SNP 0039.scaffold00152 414266 1 A G - ReadM SNP 0039.scaffold00152 414297 1 G A - Both SNP 0039.scaffold00152 414302 1 A T scaffold9754 ReadM SNP 0039.scaffold00152 414668 1 A G - Both INDEL 0039.scaffold00152 414912 1 . T scaffold9754 ScafM SNP 0039.scaffold00152 419178 1 A G scaffold12329 ScafM SNP 0039.scaffold00152 419260 1 C T scaffold12329 ScafM INDEL 0039.scaffold00152 419283 9 ......... CAATCGAGT scaffold12329 ScafM SNP 0039.scaffold00152 419295 1 A G scaffold12329 ReadM SNP 0039.scaffold00152 421193 1 G A - ReadM SNP 0039.scaffold00152 421342 1 T C - ReadM SNP 0039.scaffold00152 421366 1 G C - ReadM SNP 0039.scaffold00152 421578 1 T C - ReadM SNP 0039.scaffold00152 421706 1 G T - ReadM SNP 0039.scaffold00152 421731 1 A C - ReadM SNP 0039.scaffold00152 421858 1 T C - ReadM SNP 0039.scaffold00152 421993 1 C T - ReadM SNP 0039.scaffold00152 422000 1 T A - ReadM SNP 0039.scaffold00152 422123 1 T C - ReadM INDEL 0039.scaffold00152 422607 1 G . - ReadM SNP 0039.scaffold00152 422804 1 A T - ReadM SNP 0039.scaffold00152 422810 1 T C - ReadM SNP 0039.scaffold00152 423117 1 T C - ReadM SNP 0039.scaffold00152 423132 1 C T - ReadM SNP 0039.scaffold00152 423168 1 G C - ReadM INDEL 0039.scaffold00152 423172 1 . A - ReadM SNP 0039.scaffold00152 423341 1 A C - ReadM INDEL 0039.scaffold00152 423425 1 . T - ReadM SNP 0039.scaffold00152 423457 1 A C - ReadM SNP 0039.scaffold00152 423489 1 G A - ReadM SNP 0039.scaffold00152 423599 1 C T - ReadM SNP 0039.scaffold00152 423637 1 C T - ReadM SNP 0039.scaffold00152 423725 1 C T - ReadM SNP 0039.scaffold00152 423823 1 C T - ReadM SNP 0039.scaffold00152 423862 1 A G - ReadM SNP 0039.scaffold00152 423901 1 A G - ReadM SNP 0039.scaffold00152 424056 1 T G - ReadM SNP 0039.scaffold00152 424457 1 G C - ReadM SNP 0039.scaffold00152 424520 1 A T - ReadM SNP 0039.scaffold00152 425055 1 G A - ReadM SNP 0039.scaffold00152 425061 1 A G - ReadM SNP 0039.scaffold00152 429531 1 A G - ReadM SNP 0039.scaffold00152 435358 1 T C - ScafM SNP 0039.scaffold00152 435431 1 C G scaffold9754 ScafM SNP 0039.scaffold00152 435678 1 A T scaffold21993 Both SNP 0039.scaffold00152 435684 1 A G scaffold21993 ReadM SNP 0039.scaffold00152 436313 1 T C - ScafM SNP 0039.scaffold00152 436324 1 T C scaffold21993 ScafM SNP 0039.scaffold00152 436459 1 A G scaffold21993 ScafM SNP 0039.scaffold00152 436463 1 A G scaffold21993 ScafM SNP 0039.scaffold00152 436550 1 T G scaffold21993 ScafM SNP 0039.scaffold00152 436608 1 A T scaffold21993 ScafM INDEL 0039.scaffold00152 436612 4 .... ATTA scaffold21993 ScafM SNP 0039.scaffold00152 436649 1 A T scaffold21993 ScafM SNP 0039.scaffold00152 436680 1 T A scaffold21993 ScafM SNP 0039.scaffold00152 436712 1 G A scaffold21993 ScafM SNP 0039.scaffold00152 436717 1 T C scaffold21993 ScafM SNP 0039.scaffold00152 436736 1 C A scaffold21993 Both SNP 0039.scaffold00152 436741 1 T A scaffold21993 ScafM SNP 0039.scaffold00152 436773 1 A G scaffold21993 ScafM SNP 0039.scaffold00152 436827 1 G T scaffold21993 Both SNP 0039.scaffold00152 436833 1 G T scaffold21993 ScafM SNP 0039.scaffold00152 436861 1 T C scaffold21993 ScafM SNP 0039.scaffold00152 436863 1 G A scaffold21993 ScafM SNP 0039.scaffold00152 436882 1 G A scaffold21993 ScafM SNP 0039.scaffold00152 436919 1 C T scaffold21993 ScafM SNP 0039.scaffold00152 436933 1 T G scaffold21993 ScafM SNP 0039.scaffold00152 436974 1 C G scaffold21993 ScafM INDEL 0039.scaffold00152 436978 1 A . scaffold21993 ScafM SNP 0039.scaffold00152 437016 1 C T scaffold21993 ScafM SNP 0039.scaffold00152 437023 1 T G scaffold21993 Both SNP 0039.scaffold00152 437085 1 A G scaffold21993 ScafM SNP 0039.scaffold00152 437329 1 G A scaffold21993 ScafM SNP 0039.scaffold00152 437396 1 C T scaffold21993 ScafM INDEL 0039.scaffold00152 437540 7 ....... GGTCTAT scaffold21993 ScafM SNP 0039.scaffold00152 437753 1 A C scaffold21993 ScafM SNP 0039.scaffold00152 437771 1 G T scaffold21993 ReadM SNP 0039.scaffold00152 440242 1 T G - Both SNP 0039.scaffold00152 440398 1 C T scaffold12260 Both SNP 0039.scaffold00152 440503 1 T C scaffold12260 Both SNP 0039.scaffold00152 440515 1 G T scaffold12260 Both SNP 0039.scaffold00152 440605 1 C G scaffold12260 Both SNP 0039.scaffold00152 440664 1 C T scaffold12260 Both SNP 0039.scaffold00152 440692 1 G A scaffold12260 Both SNP 0039.scaffold00152 440800 1 C A scaffold12260 ScafM INDEL 0039.scaffold00152 440807 5 AAAAA ..... scaffold12260 ScafM SNP 0039.scaffold00152 440816 2 AA GT scaffold12260 Both SNP 0039.scaffold00152 440869 1 A G scaffold12260 Both SNP 0039.scaffold00152 440997 1 A T scaffold12260 ReadM SNP 0039.scaffold00152 441229 1 A G - ScafM INDEL 0039.scaffold00152 441405 1 C . scaffold3836 ScafM SNP 0039.scaffold00152 441420 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 441441 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 441466 2 AA GG scaffold3836 ScafM SNP 0039.scaffold00152 441498 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 441538 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 441586 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 441593 3 AAG ... scaffold3836 ScafM SNP 0039.scaffold00152 441663 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 441706 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 441757 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 441771 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 441773 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 441783 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 441806 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 441811 1 C A scaffold3836 ScafM INDEL 0039.scaffold00152 441832 2 AA .. scaffold3836 ScafM SNP 0039.scaffold00152 441841 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 441882 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 441892 1 C T scaffold3836 ScafM INDEL 0039.scaffold00152 441897 3 ... AGT scaffold3836 ScafM SNP 0039.scaffold00152 441914 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 441921 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 441938 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 441952 1 . C scaffold3836 ScafM SNP 0039.scaffold00152 441960 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 441964 2 TA AT scaffold3836 ScafM SNP 0039.scaffold00152 441992 1 A G scaffold3836 Both SNP 0039.scaffold00152 442026 1 A T scaffold3836 Both INDEL 0039.scaffold00152 442061 1 T . scaffold3836 ScafM SNP 0039.scaffold00152 442069 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 442127 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 442169 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 442195 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 442200 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 442232 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 442236 3 ... ACT scaffold3836 ScafM SNP 0039.scaffold00152 442242 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 442244 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 442254 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 442271 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 442273 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 442299 2 AT GC scaffold3836 ScafM SNP 0039.scaffold00152 442312 2 AA TT scaffold3836 ScafM SNP 0039.scaffold00152 442354 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 442356 1 . A scaffold3836 ScafM SNP 0039.scaffold00152 442373 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 442432 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 442437 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 442457 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 442472 1 G T scaffold3836 ScafM INDEL 0039.scaffold00152 442482 1 . A scaffold3836 ScafM SNP 0039.scaffold00152 442763 1 A G scaffold12009 ScafM SNP 0039.scaffold00152 442773 1 T C scaffold12009 ScafM SNP 0039.scaffold00152 442861 1 G A scaffold12009 ScafM SNP 0039.scaffold00152 442868 1 T C scaffold12009 ScafM SNP 0039.scaffold00152 442870 1 C T scaffold12009 ScafM SNP 0039.scaffold00152 442879 1 C A scaffold12009 ScafM INDEL 0039.scaffold00152 442902 3 TCC ... scaffold12009 ScafM SNP 0039.scaffold00152 442910 1 T C scaffold12009 ScafM SNP 0039.scaffold00152 442920 1 C T scaffold12009 ScafM INDEL 0039.scaffold00152 442942 1 . A scaffold12009 ScafM SNP 0039.scaffold00152 442984 1 A T scaffold12009 ScafM SNP 0039.scaffold00152 442990 1 T G scaffold12009 ScafM SNP 0039.scaffold00152 442996 1 A T scaffold12009 ScafM INDEL 0039.scaffold00152 443053 1 A . scaffold12009 ScafM SNP 0039.scaffold00152 443107 1 G A scaffold12009 ScafM SNP 0039.scaffold00152 443137 1 C T scaffold12009 ScafM SNP 0039.scaffold00152 443145 1 C T scaffold12009 ScafM SNP 0039.scaffold00152 443155 1 A G scaffold12009 ScafM SNP 0039.scaffold00152 443262 1 A G scaffold12009 ScafM SNP 0039.scaffold00152 443298 1 C G scaffold12009 ScafM SNP 0039.scaffold00152 443306 1 G C scaffold12009 ScafM INDEL 0039.scaffold00152 443325 3 ... TAT scaffold12009 ScafM SNP 0039.scaffold00152 443347 1 C T scaffold12009 ScafM SNP 0039.scaffold00152 443370 1 G A scaffold12009 ScafM INDEL 0039.scaffold00152 443381 1 A . scaffold12009 ScafM SNP 0039.scaffold00152 443386 1 C T scaffold12009 ScafM SNP 0039.scaffold00152 443528 1 C A scaffold12009 ScafM SNP 0039.scaffold00152 443531 1 C A scaffold12009 ScafM SNP 0039.scaffold00152 443557 1 G C scaffold12009 ScafM SNP 0039.scaffold00152 443564 1 A G scaffold12009 ScafM SNP 0039.scaffold00152 443658 1 C G scaffold12009 ScafM SNP 0039.scaffold00152 443839 1 A T scaffold12009 ScafM SNP 0039.scaffold00152 443879 1 G T scaffold12009 ScafM INDEL 0039.scaffold00152 445985 3 ATT ... scaffold3836 ScafM SNP 0039.scaffold00152 445996 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 446006 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 446015 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 449651 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 449653 1 C A scaffold15369 ScafM SNP 0039.scaffold00152 451395 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451420 1 C G scaffold15369 ScafM SNP 0039.scaffold00152 451432 2 GC AT scaffold15369 ScafM SNP 0039.scaffold00152 451439 2 GT TG scaffold15369 ScafM INDEL 0039.scaffold00152 451473 3 ... TGT scaffold15369 ScafM SNP 0039.scaffold00152 451488 1 T C scaffold15369 ScafM SNP 0039.scaffold00152 451500 1 T G scaffold15369 ScafM INDEL 0039.scaffold00152 451504 5 CTTTT ..... scaffold15369 ScafM SNP 0039.scaffold00152 451517 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451535 1 A T scaffold15369 ScafM SNP 0039.scaffold00152 451544 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 451550 1 T C scaffold15369 ScafM SNP 0039.scaffold00152 451557 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451576 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451581 1 G A scaffold15369 ScafM INDEL 0039.scaffold00152 451589 1 . T scaffold15369 ScafM SNP 0039.scaffold00152 451605 2 GC TG scaffold15369 ScafM SNP 0039.scaffold00152 451608 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451633 1 G A scaffold15369 ScafM SNP 0039.scaffold00152 451646 1 C T scaffold15369 ScafM SNP 0039.scaffold00152 451648 1 A T scaffold15369 ScafM SNP 0039.scaffold00152 453088 1 T G scaffold3836 ScafM INDEL 0039.scaffold00152 453130 4 .... CGTA scaffold3836 ScafM SNP 0039.scaffold00152 453169 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 453186 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 453226 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 453233 1 G C scaffold3836 ScafM INDEL 0039.scaffold00152 453240 9 TTGTTATCT ......... scaffold3836 ScafM INDEL 0039.scaffold00152 453250 2 TG .. scaffold3836 ScafM INDEL 0039.scaffold00152 453254 3 TCG ... scaffold3836 ScafM SNP 0039.scaffold00152 453291 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 453305 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 453326 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 453357 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 453361 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 453389 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 453391 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 453397 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 453423 1 T G scaffold3836 ScafM INDEL 0039.scaffold00152 453443 8 ........ GACTCTAT scaffold3836 ScafM SNP 0039.scaffold00152 453489 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 453565 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 453588 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 453595 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 453597 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 453604 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 454144 1 T A scaffold3669 ScafM SNP 0039.scaffold00152 454174 2 TC CT scaffold3669 ScafM SNP 0039.scaffold00152 454191 1 C T scaffold3669 ScafM SNP 0039.scaffold00152 454312 1 A T scaffold4432 ScafM SNP 0039.scaffold00152 454323 2 GC TT scaffold4432 ScafM SNP 0039.scaffold00152 454337 1 A C scaffold4432 ScafM SNP 0039.scaffold00152 454346 1 G A scaffold4432 ScafM SNP 0039.scaffold00152 454375 1 A G scaffold4432 ScafM SNP 0039.scaffold00152 454380 1 T C scaffold4432 ScafM SNP 0039.scaffold00152 454389 1 T A scaffold4432 ScafM SNP 0039.scaffold00152 454438 1 C T scaffold4432 ScafM SNP 0039.scaffold00152 454451 1 G T scaffold4432 ScafM SNP 0039.scaffold00152 454457 1 C T scaffold4432 ScafM SNP 0039.scaffold00152 454460 1 C G scaffold4432 ScafM INDEL 0039.scaffold00152 454561 4 .... TTTT scaffold4432 ScafM SNP 0039.scaffold00152 454567 1 T A scaffold4432 ScafM SNP 0039.scaffold00152 454598 2 AG TA scaffold4432 ScafM SNP 0039.scaffold00152 454637 1 G A scaffold4432 ScafM SNP 0039.scaffold00152 454675 1 T A scaffold4432 ScafM INDEL 0039.scaffold00152 454681 4 ATCG .... scaffold4432 ScafM SNP 0039.scaffold00152 454687 1 G C scaffold4432 ScafM SNP 0039.scaffold00152 454701 1 T A scaffold4432 ScafM SNP 0039.scaffold00152 454706 1 T C scaffold4432 ScafM SNP 0039.scaffold00152 454716 1 A C scaffold4432 ScafM SNP 0039.scaffold00152 455711 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 455717 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 455766 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 455770 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 455820 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 455829 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 455833 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 455850 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 455861 1 A T scaffold3836 ScafM INDEL 0039.scaffold00152 455871 1 . T scaffold3836 ScafM SNP 0039.scaffold00152 455891 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 455899 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 455913 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 455916 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 455957 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 455993 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 456007 1 T G scaffold3836 ScafM INDEL 0039.scaffold00152 456030 12 ............ TCTACAATTAAG scaffold3836 ScafM SNP 0039.scaffold00152 456104 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 456118 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 456134 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 456140 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 456205 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 456220 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 456258 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 456268 1 C T scaffold3836 ScafM INDEL 0039.scaffold00152 456293 1 . T scaffold3836 ScafM SNP 0039.scaffold00152 456313 1 A T scaffold3836 ScafM INDEL 0039.scaffold00152 456354 2 AT .. scaffold3836 ScafM SNP 0039.scaffold00152 456417 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 456444 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 456463 1 C A scaffold3836 ScafM INDEL 0039.scaffold00152 456482 3 ... TTT scaffold3836 ScafM SNP 0039.scaffold00152 456513 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469124 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 469138 1 T A scaffold3836 ScafM INDEL 0039.scaffold00152 469143 2 TT .. scaffold3836 ScafM SNP 0039.scaffold00152 469285 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469292 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 469297 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469342 1 G C scaffold3836 ScafM INDEL 0039.scaffold00152 469359 4 AATT .... scaffold3836 ScafM SNP 0039.scaffold00152 469376 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 469381 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469383 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469401 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 469405 2 GT AG scaffold3836 ScafM SNP 0039.scaffold00152 469419 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 469425 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469427 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 469429 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469436 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 469521 1 C . scaffold3836 ScafM SNP 0039.scaffold00152 469526 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 469528 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 469536 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469540 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469542 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 469547 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 469550 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 469554 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 469558 4 GGCC TCTT scaffold3836 ScafM SNP 0039.scaffold00152 469580 2 AG CA scaffold3836 ScafM SNP 0039.scaffold00152 469595 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469662 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469690 1 G A scaffold3836 ScafM INDEL 0039.scaffold00152 469803 3 ... CAG scaffold3836 ScafM INDEL 0039.scaffold00152 469853 1 T . scaffold3836 ScafM SNP 0039.scaffold00152 469859 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 469903 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 469908 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 469915 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 469922 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469936 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 469941 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 469943 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 470017 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 470026 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 470078 1 T G scaffold3836 Both SNP 0039.scaffold00152 470143 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 470200 1 A C scaffold3836 Both SNP 0039.scaffold00152 470263 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 470329 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 470332 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 470335 1 G A scaffold3836 Both SNP 0039.scaffold00152 470359 1 A T scaffold3836 Both SNP 0039.scaffold00152 470439 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 470459 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 470524 1 C T scaffold3836 ScafM INDEL 0039.scaffold00152 470531 4 .... GATC scaffold3836 ScafM SNP 0039.scaffold00152 470544 1 T C scaffold3836 ScafM INDEL 0039.scaffold00152 470564 2 .. TA scaffold3836 ScafM SNP 0039.scaffold00152 470587 2 CT TA scaffold3836 ScafM INDEL 0039.scaffold00152 470688 8 ........ TAATCATG scaffold3836 ScafM SNP 0039.scaffold00152 470737 2 GT AC scaffold3836 ScafM SNP 0039.scaffold00152 470755 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 471331 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 471384 1 G T scaffold3836 Both INDEL 0039.scaffold00152 471743 2 GA .. scaffold3836 Both SNP 0039.scaffold00152 471808 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 471840 1 C A scaffold3836 ScafM INDEL 0039.scaffold00152 471849 1 . T scaffold3836 ScafM SNP 0039.scaffold00152 471856 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 471879 4 AAAA .... scaffold3836 ScafM SNP 0039.scaffold00152 471884 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 471911 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 471918 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 471947 1 C A scaffold3836 ScafM INDEL 0039.scaffold00152 471974 2 AT .. scaffold3836 ScafM SNP 0039.scaffold00152 472006 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 472016 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 472062 1 G A scaffold3836 ScafM INDEL 0039.scaffold00152 472067 5 AAAAA ..... scaffold3836 ScafM SNP 0039.scaffold00152 472114 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 472170 1 G A scaffold3836 Both SNP 0039.scaffold00152 472194 1 C A scaffold3836 ReadM SNP 0039.scaffold00152 472261 1 C T - ReadM INDEL 0039.scaffold00152 472289 2 TT .. - ReadM SNP 0039.scaffold00152 472326 1 A G - ReadM INDEL 0039.scaffold00152 473049 1 . T - ScafM SNP 0039.scaffold00152 473565 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 473573 2 GA TT scaffold3836 ScafM INDEL 0039.scaffold00152 473579 1 . T scaffold3836 ScafM SNP 0039.scaffold00152 473633 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 473656 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 473675 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 473677 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 473724 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 473733 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 474143 1 G A scaffold3836 ScafM INDEL 0039.scaffold00152 474212 1 . G scaffold3836 ScafM INDEL 0039.scaffold00152 474216 1 A . scaffold3836 ScafM SNP 0039.scaffold00152 474234 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 474256 1 T A scaffold3836 ScafM INDEL 0039.scaffold00152 474270 1 T . scaffold3836 ScafM SNP 0039.scaffold00152 474275 1 G C scaffold3836 ReadM SNP 0039.scaffold00152 474499 1 T C - ReadM SNP 0039.scaffold00152 474533 1 T C - ReadM INDEL 0039.scaffold00152 474537 1 . A - ReadM SNP 0039.scaffold00152 474584 1 T C - ReadM SNP 0039.scaffold00152 474613 1 T A - ReadM SNP 0039.scaffold00152 474618 1 G C - Both SNP 0039.scaffold00152 474733 1 A T scaffold3836 Both SNP 0039.scaffold00152 474757 1 C G scaffold3836 ScafM INDEL 0039.scaffold00152 474936 4 TGGT .... scaffold3836 Both SNP 0039.scaffold00152 475005 1 G A scaffold3836 Both SNP 0039.scaffold00152 475012 1 G A scaffold3836 Both SNP 0039.scaffold00152 475022 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 475058 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 475062 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 475073 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 475109 1 . T scaffold3836 ScafM INDEL 0039.scaffold00152 475636 3 TAT ... scaffold3836 ScafM SNP 0039.scaffold00152 475653 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 475667 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 475996 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 476006 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 476048 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 476082 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 476107 1 G A scaffold3836 ScafM INDEL 0039.scaffold00152 476123 3 ... TTA scaffold3836 ScafM SNP 0039.scaffold00152 476128 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 476178 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 476184 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 476378 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 476399 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 476412 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 476426 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 476444 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 476482 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 476514 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 476532 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 476545 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 476547 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 476551 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 476659 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 476676 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 476705 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 476710 1 A G scaffold3836 ReadM SNP 0039.scaffold00152 477444 1 C T - ReadM SNP 0039.scaffold00152 477463 1 A C - ReadM SNP 0039.scaffold00152 477779 1 A T - ScafM SNP 0039.scaffold00152 478762 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 478771 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 478858 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 478896 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 478923 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 478969 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 478972 1 G C scaffold3836 ScafM SNP 0039.scaffold00152 478977 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 480105 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 480130 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 480314 1 G T scaffold17918 ScafM SNP 0039.scaffold00152 480334 1 C T scaffold17918 ReadM SNP 0039.scaffold00152 480705 1 T G - ReadM SNP 0039.scaffold00152 480722 1 G A - ReadM SNP 0039.scaffold00152 480753 1 G A - ReadM SNP 0039.scaffold00152 480861 1 C T - ReadM SNP 0039.scaffold00152 480877 1 T C - ReadM SNP 0039.scaffold00152 481483 1 A G - ReadM SNP 0039.scaffold00152 481495 1 T A - ReadM SNP 0039.scaffold00152 481591 1 A G - ReadM SNP 0039.scaffold00152 481825 1 C T - ReadM SNP 0039.scaffold00152 481828 1 G A - ScafM SNP 0039.scaffold00152 483826 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 483848 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 483852 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 483906 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 483919 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 483933 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 483943 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 484032 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 484045 1 T C scaffold3836 ScafM INDEL 0039.scaffold00152 484050 2 .. TA scaffold3836 ScafM SNP 0039.scaffold00152 484060 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 484072 1 A T scaffold3836 Both SNP 0039.scaffold00152 484144 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 484191 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 484207 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 484219 2 CG TA scaffold3836 Both SNP 0039.scaffold00152 484290 1 C T scaffold3836 Both SNP 0039.scaffold00152 484702 1 C G scaffold3836 Both SNP 0039.scaffold00152 484804 1 G T scaffold3836 Both SNP 0039.scaffold00152 484860 1 A G scaffold3836 Both SNP 0039.scaffold00152 484879 1 C T scaffold3836 Both SNP 0039.scaffold00152 484896 1 T C scaffold3836 Both SNP 0039.scaffold00152 484910 1 T A scaffold3836 Both SNP 0039.scaffold00152 484995 1 A T scaffold3836 Both SNP 0039.scaffold00152 485017 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 485088 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 485090 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 485146 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 485152 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 485175 1 C G scaffold3836 ScafM INDEL 0039.scaffold00152 485181 3 ... GTT scaffold3836 ScafM SNP 0039.scaffold00152 485187 1 T G scaffold3836 ScafM SNP 0039.scaffold00152 485198 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 485217 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 485219 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 485245 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 485264 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 485349 1 C A scaffold3836 ScafM SNP 0039.scaffold00152 485363 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 485431 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 485449 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 485469 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 485494 1 A T scaffold3836 ScafM SNP 0039.scaffold00152 485505 1 T G scaffold3836 ScafM INDEL 0039.scaffold00152 485510 1 C . scaffold3836 ReadM SNP 0039.scaffold00152 485602 1 C T - ReadM SNP 0039.scaffold00152 485613 1 G A - ReadM INDEL 0039.scaffold00152 486131 1 . T - ReadM SNP 0039.scaffold00152 486141 1 C T - ReadM SNP 0039.scaffold00152 486185 1 G A - ReadM INDEL 0039.scaffold00152 486189 1 . A - ReadM SNP 0039.scaffold00152 486231 1 T C - ReadM SNP 0039.scaffold00152 486272 1 G A - ReadM SNP 0039.scaffold00152 486290 1 T A - ReadM SNP 0039.scaffold00152 486354 1 G A - ReadM SNP 0039.scaffold00152 487056 1 T A - ScafM INDEL 0039.scaffold00152 487224 1 G . scaffold3836 ScafM SNP 0039.scaffold00152 487249 1 T C scaffold3836 ScafM SNP 0039.scaffold00152 487285 1 C T scaffold3836 Both SNP 0039.scaffold00152 487333 1 G A scaffold3836 ReadM SNP 0039.scaffold00152 487408 1 A G - ScafM SNP 0039.scaffold00152 487674 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 487716 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 487722 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 487748 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 487758 1 C T scaffold3836 ScafM SNP 0039.scaffold00152 487766 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 487814 1 A G scaffold3836 ScafM SNP 0039.scaffold00152 487820 1 A C scaffold3836 ScafM SNP 0039.scaffold00152 487861 1 G A scaffold3836 ScafM SNP 0039.scaffold00152 487875 1 C T scaffold3836 ScafM INDEL 0039.scaffold00152 487881 1 T . scaffold3836 ScafM SNP 0039.scaffold00152 487883 1 T A scaffold3836 ScafM SNP 0039.scaffold00152 487927 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 487941 1 A . scaffold3836 ScafM SNP 0039.scaffold00152 487946 1 C G scaffold3836 ScafM SNP 0039.scaffold00152 487973 1 A G scaffold3836 Both SNP 0039.scaffold00152 487997 1 A C scaffold3836 Both SNP 0039.scaffold00152 488423 1 T C scaffold3836 Both SNP 0039.scaffold00152 488469 1 G A scaffold3836 Both SNP 0039.scaffold00152 488530 1 A G scaffold3836 ScafM INDEL 0039.scaffold00152 488543 3 ... TAC scaffold3836 ScafM SNP 0039.scaffold00152 488589 2 AA GG scaffold3836 Both SNP 0039.scaffold00152 488625 1 T G scaffold3836 Both SNP 0039.scaffold00152 488647 2 CA GG scaffold3836 ScafM SNP 0039.scaffold00152 488698 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 488705 1 G T scaffold3836 ScafM SNP 0039.scaffold00152 488712 1 G C scaffold3836 ScafM INDEL 0039.scaffold00152 488718 5 AAAAA ..... scaffold3836 ScafM SNP 0039.scaffold00152 488724 1 T A scaffold3836 ReadM SNP 0039.scaffold00152 490056 1 A G - ScafM SNP 0039.scaffold00152 496415 1 G T scaffold4941 ScafM SNP 0039.scaffold00152 496426 1 T A scaffold4941 ScafM SNP 0039.scaffold00152 496450 2 TG CA scaffold4941 ScafM SNP 0039.scaffold00152 496480 1 A T scaffold4941 ScafM INDEL 0039.scaffold00152 496532 4 TATA .... scaffold4941 ScafM SNP 0039.scaffold00152 496559 1 A T scaffold4941 ScafM SNP 0039.scaffold00152 496588 1 C T scaffold4941 ScafM SNP 0039.scaffold00152 496606 1 A T scaffold4941 ScafM INDEL 0039.scaffold00152 496629 1 A . scaffold4941 ScafM SNP 0039.scaffold00152 496631 1 A T scaffold4941 ScafM SNP 0039.scaffold00152 496650 1 G A scaffold4941 ScafM SNP 0039.scaffold00152 496652 1 G A scaffold4941 ScafM SNP 0039.scaffold00152 496662 1 C T scaffold4941 ScafM SNP 0039.scaffold00152 496706 1 G A scaffold4941 ScafM SNP 0039.scaffold00152 496723 1 G A scaffold4941 ScafM SNP 0039.scaffold00152 496729 1 G T scaffold4941 ScafM INDEL 0039.scaffold00152 496735 2 CA .G scaffold4941 ScafM SNP 0039.scaffold00152 496763 1 A T scaffold4941 ScafM SNP 0039.scaffold00152 496781 1 T G scaffold4941 ScafM INDEL 0039.scaffold00152 496810 1 . T scaffold4941 ScafM SNP 0039.scaffold00152 496838 1 T C scaffold4941 ScafM SNP 0039.scaffold00152 496840 1 G A scaffold4941 ScafM SNP 0039.scaffold00152 496846 2 TC CT scaffold4941 ScafM SNP 0039.scaffold00152 496881 2 CG TT scaffold4941 ScafM SNP 0039.scaffold00152 496939 1 C A scaffold4941 ReadM SNP 0039.scaffold00152 497612 1 A T - ReadM SNP 0039.scaffold00152 499069 1 A C - ReadM SNP 0039.scaffold00152 499140 1 G A - ReadM SNP 0039.scaffold00152 499172 1 C T - ReadM SNP 0039.scaffold00152 500081 1 G A - ReadM SNP 0039.scaffold00152 500280 1 A G - ReadM SNP 0039.scaffold00152 500629 1 C T - ReadM SNP 0039.scaffold00152 500685 1 C A - ScafM INDEL 0039.scaffold00152 504679 1 . C scaffold3836 ReadM SNP 0039.scaffold00152 511124 1 A G - ReadM SNP 0039.scaffold00152 511145 1 T G - Both SNP 0039.scaffold00152 511312 1 C A scaffold3836 Both SNP 0039.scaffold00152 511526 1 G A scaffold3836 Both SNP 0039.scaffold00152 511575 1 G A scaffold3836 ReadM SNP 0039.scaffold00152 512240 1 A G - ReadM SNP 0039.scaffold00152 516420 1 T A - ScafM SNP 0039.scaffold00152 518998 1 A T scaffold75751 ReadM INDEL 0039.scaffold00152 519884 1 . T - ReadM INDEL 0039.scaffold00152 521481 1 G . - ReadM SNP 0039.scaffold00152 522316 1 A G - ReadM SNP 0039.scaffold00152 522336 1 G A - ReadM SNP 0039.scaffold00152 522348 1 G A - Both SNP 0039.scaffold00152 522558 1 A C scaffold6999 Both SNP 0039.scaffold00152 522776 1 G A scaffold6999 ReadM SNP 0039.scaffold00152 525279 1 A C - ReadM SNP 0039.scaffold00152 530670 1 A G - Both SNP 0039.scaffold00152 531224 1 C T scaffold6999 ReadM SNP 0039.scaffold00152 532212 1 G A - ReadM SNP 0039.scaffold00152 534415 1 G T - ReadM SNP 0039.scaffold00152 535228 1 C T - ReadM SNP 0039.scaffold00152 535748 1 G C - ReadM SNP 0039.scaffold00152 536105 1 A T - ReadM SNP 0039.scaffold00152 536200 1 G A - ReadM SNP 0039.scaffold00152 536747 1 C T - ReadM SNP 0039.scaffold00152 536829 1 T A - ScafM INDEL 0039.scaffold00152 536991 14 GGGGGGGGGACGGC .............. scaffold6999 Both SNP 0039.scaffold00152 537630 1 A T scaffold6999 ReadM SNP 0039.scaffold00152 538246 1 C T - ReadM SNP 0039.scaffold00152 538295 1 C G - ReadM SNP 0039.scaffold00152 538382 1 G C - ReadM SNP 0039.scaffold00152 538389 1 A C - ReadM SNP 0039.scaffold00152 538499 1 G A - ReadM SNP 0039.scaffold00152 539628 1 C T - ReadM SNP 0039.scaffold00152 539839 1 G A - ReadM SNP 0039.scaffold00152 539846 1 T C - ReadM SNP 0039.scaffold00152 540283 1 G T - ReadM SNP 0039.scaffold00152 540494 1 T A - Both SNP 0039.scaffold00152 541211 1 G A scaffold6999 Both SNP 0039.scaffold00152 541667 1 G A scaffold6999 ScafM SNP 0039.scaffold00152 560418 1 A G scaffold12344 ScafM INDEL 0039.scaffold00152 560575 1 . T scaffold12344 ReadM SNP 0039.scaffold00152 563352 1 A G - ReadM SNP 0039.scaffold00152 564595 1 A C - ReadM SNP 0039.scaffold00152 564700 1 G C - Both SNP 0039.scaffold00152 568005 1 A T scaffold12344 Both INDEL 0039.scaffold00152 568274 1 A . scaffold12344 ReadM SNP 0039.scaffold00152 568953 1 C T - Both SNP 0039.scaffold00152 569821 1 G A scaffold12344 Both SNP 0039.scaffold00152 570395 1 T A scaffold12344 ReadM INDEL 0039.scaffold00152 570752 1 A . - ReadM SNP 0039.scaffold00152 571043 1 T A - ReadM SNP 0039.scaffold00152 571057 1 A C - ReadM SNP 0039.scaffold00152 571406 1 C G - ReadM SNP 0039.scaffold00152 571539 1 T C - ReadM SNP 0039.scaffold00152 571719 1 T C - ReadM SNP 0039.scaffold00152 571770 1 G T - ReadM SNP 0039.scaffold00152 571797 1 T C - ReadM SNP 0039.scaffold00152 572039 1 C T - ReadM SNP 0039.scaffold00152 572102 1 A G - ReadM SNP 0039.scaffold00152 572304 1 G A - ReadM INDEL 0039.scaffold00152 572322 1 A . - ReadM SNP 0039.scaffold00152 572412 1 A T - ReadM SNP 0039.scaffold00152 572447 1 A C - ReadM SNP 0039.scaffold00152 572493 1 T G - ReadM SNP 0039.scaffold00152 572802 1 T G - ReadM SNP 0039.scaffold00152 572824 1 T A - ReadM SNP 0039.scaffold00152 572907 1 G A - ReadM SNP 0039.scaffold00152 573030 1 A T - ReadM SNP 0039.scaffold00152 573181 1 A G - ReadM SNP 0039.scaffold00152 573601 1 T A - ReadM SNP 0039.scaffold00152 573606 1 G T - ReadM SNP 0039.scaffold00152 573686 1 G A - ReadM SNP 0039.scaffold00152 573694 1 C T - ReadM INDEL 0039.scaffold00152 573929 1 A . - ReadM SNP 0039.scaffold00152 574114 1 A G - ReadM SNP 0039.scaffold00152 574306 1 T G - ReadM SNP 0039.scaffold00152 574327 1 T C - ReadM SNP 0039.scaffold00152 576809 1 C A - ReadM SNP 0039.scaffold00152 576950 1 T A - ReadM SNP 0039.scaffold00152 577033 1 A G - ReadM SNP 0039.scaffold00152 577039 1 T C - ReadM SNP 0039.scaffold00152 577161 1 G A - ReadM SNP 0039.scaffold00152 577235 1 G A - ReadM SNP 0039.scaffold00152 577307 1 A G - ReadM SNP 0039.scaffold00152 577314 1 C T - ReadM SNP 0039.scaffold00152 577337 1 A T - ReadM SNP 0039.scaffold00152 577566 1 A G - ReadM SNP 0039.scaffold00152 577609 1 T A - ReadM SNP 0039.scaffold00152 577676 1 G A - ScafM SNP 0039.scaffold00152 578537 1 C A scaffold3353 ScafM SNP 0039.scaffold00152 578544 1 A T scaffold3353 ReadM SNP 0039.scaffold00152 579366 1 A G - ReadM SNP 0039.scaffold00152 579472 1 G A - Both SNP 0039.scaffold00152 579610 1 G A scaffold23451 Both SNP 0039.scaffold00152 579622 1 A T scaffold23451 Both SNP 0039.scaffold00152 579651 1 G A scaffold23451 Both SNP 0039.scaffold00152 579994 1 T A scaffold23451 Both INDEL 0039.scaffold00152 580021 1 . C scaffold23451 ReadM SNP 0039.scaffold00152 580123 1 T C - ReadM SNP 0039.scaffold00152 580159 1 G A - ReadM SNP 0039.scaffold00152 580210 1 G T - ReadM SNP 0039.scaffold00152 580234 1 C T - Both SNP 0039.scaffold00152 580531 1 T C scaffold23451 ScafM INDEL 0039.scaffold00152 580809 12 ATCTCTATGGGA ............ scaffold23451 Both SNP 0039.scaffold00152 580973 1 A C scaffold23451 ScafM SNP 0039.scaffold00152 581113 1 A G scaffold23451 ScafM INDEL 0039.scaffold00152 581180 5 ..... TATCA scaffold23451 ScafM SNP 0039.scaffold00152 581224 1 C T scaffold23451 ScafM SNP 0039.scaffold00152 581250 1 T C scaffold23451 ScafM SNP 0039.scaffold00152 581863 1 T A scaffold23451 ReadM SNP 0039.scaffold00152 582098 1 A C - ReadM SNP 0039.scaffold00152 582158 1 C T - ReadM SNP 0039.scaffold00152 582305 1 T A - ReadM SNP 0039.scaffold00152 582340 1 G A - ReadM INDEL 0039.scaffold00152 582403 2 TT .. - ReadM SNP 0039.scaffold00152 582435 1 A G - ReadM SNP 0039.scaffold00152 582626 1 G A - ReadM SNP 0039.scaffold00152 582823 1 T C - ReadM SNP 0039.scaffold00152 582898 1 T G - ScafM INDEL 0039.scaffold00152 583034 8 ........ GAATCCCA scaffold23451 Both SNP 0039.scaffold00152 583062 1 C G scaffold23451 Both SNP 0039.scaffold00152 583259 1 G C scaffold23451 Both SNP 0039.scaffold00152 583414 1 A G scaffold23451 Both INDEL 0039.scaffold00152 583422 1 . C scaffold23451 Both SNP 0039.scaffold00152 583535 1 C T scaffold23451 Both INDEL 0039.scaffold00152 583588 1 A . scaffold23451 ScafM SNP 0039.scaffold00152 583725 1 G T scaffold23451 ScafM INDEL 0039.scaffold00152 583737 1 . T scaffold23451 ScafM SNP 0039.scaffold00152 583770 1 C T scaffold23451 ScafM SNP 0039.scaffold00152 583830 1 A G scaffold23451 ScafM SNP 0039.scaffold00152 583903 1 G A scaffold23451 ReadM SNP 0039.scaffold00152 584498 1 A C - ReadM SNP 0039.scaffold00152 584560 1 C T - ReadM SNP 0039.scaffold00152 584709 1 T G - ReadM SNP 0039.scaffold00152 584777 1 C G - ReadM SNP 0039.scaffold00152 584930 1 T G - ReadM SNP 0039.scaffold00152 584965 1 A C - Both SNP 0039.scaffold00152 585259 1 A G scaffold23451 ReadM INDEL 0039.scaffold00152 585899 2 .. TA - ReadM SNP 0039.scaffold00152 585903 1 A G - Both INDEL 0039.scaffold00152 586292 2 .. AA scaffold33306 ReadM INDEL 0039.scaffold00152 586294 2 .. AG - Both SNP 0039.scaffold00152 586299 1 A G scaffold33306 Both SNP 0039.scaffold00152 587586 1 G A scaffold33306 ScafM SNP 0039.scaffold00152 588085 1 C A scaffold33306 ReadM SNP 0039.scaffold00152 588845 1 T C - ReadM SNP 0039.scaffold00152 588860 1 C T - ReadM SNP 0039.scaffold00152 589003 1 C T - ReadM SNP 0039.scaffold00152 589196 1 G T - ReadM SNP 0039.scaffold00152 589282 1 C T - ReadM SNP 0039.scaffold00152 589412 1 C A - ReadM SNP 0039.scaffold00152 589418 1 A T - ReadM SNP 0039.scaffold00152 589460 1 T C - ReadM SNP 0039.scaffold00152 589559 1 C A - ReadM SNP 0039.scaffold00152 589593 1 T C - ReadM SNP 0039.scaffold00152 589729 1 A T - ReadM SNP 0039.scaffold00152 589745 1 G C - ReadM SNP 0039.scaffold00152 589799 1 G T - ReadM SNP 0039.scaffold00152 589835 1 A T - ReadM SNP 0039.scaffold00152 590202 1 C T - ReadM SNP 0039.scaffold00152 590495 1 A G - ReadM SNP 0039.scaffold00152 590515 1 T G - ScafM SNP 0039.scaffold00152 590792 1 T G scaffold33306 ReadM SNP 0039.scaffold00152 590928 1 T A - ScafM INDEL 0039.scaffold00152 591908 1 . T scaffold10124 ScafM SNP 0039.scaffold00152 591937 1 A G scaffold10124 ScafM INDEL 0039.scaffold00152 591970 1 . A scaffold10124 ScafM INDEL 0039.scaffold00152 592146 12 ............ CAAAGCCAAATT scaffold10124 ScafM INDEL 0039.scaffold00152 592149 2 .. AA scaffold10124 ScafM INDEL 0039.scaffold00152 592159 1 . A scaffold10124 ScafM SNP 0039.scaffold00152 592167 1 A C scaffold10124 ScafM SNP 0039.scaffold00152 592988 1 T A scaffold10312 ScafM SNP 0039.scaffold00152 592996 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 593052 1 T C scaffold10312 ReadM SNP 0039.scaffold00152 593401 1 G T - ReadM SNP 0039.scaffold00152 593702 1 G A - ScafM INDEL 0039.scaffold00152 593895 2 .. TT scaffold10312 Both SNP 0039.scaffold00152 593916 1 T C scaffold10312 Both SNP 0039.scaffold00152 593945 1 G T scaffold10312 ReadM SNP 0039.scaffold00152 594257 1 G A - ReadM SNP 0039.scaffold00152 594373 1 G C - ReadM SNP 0039.scaffold00152 594807 1 T G - ReadM SNP 0039.scaffold00152 594862 1 T C - ScafM SNP 0039.scaffold00152 595337 1 A G scaffold5903 ScafM SNP 0039.scaffold00152 595342 1 G A scaffold5903 ScafM INDEL 0039.scaffold00152 595350 1 G . scaffold5903 ScafM INDEL 0039.scaffold00152 595357 1 T . scaffold5903 ScafM SNP 0039.scaffold00152 595448 1 T G scaffold5903 ScafM SNP 0039.scaffold00152 595452 1 A G scaffold5903 ScafM SNP 0039.scaffold00152 595469 1 G A scaffold5903 ScafM SNP 0039.scaffold00152 595666 1 T A scaffold11860 ScafM SNP 0039.scaffold00152 595734 1 T C scaffold11860 ScafM INDEL 0039.scaffold00152 595743 2 .A CT scaffold11860 ScafM SNP 0039.scaffold00152 595776 1 C T scaffold11860 ScafM INDEL 0039.scaffold00152 595778 1 . G scaffold11860 ScafM SNP 0039.scaffold00152 595807 1 C G scaffold11860 ScafM SNP 0039.scaffold00152 595816 1 G C scaffold11860 ScafM SNP 0039.scaffold00152 595820 1 A C scaffold11860 ScafM SNP 0039.scaffold00152 595862 1 A G scaffold11860 ScafM SNP 0039.scaffold00152 595873 1 T G scaffold11860 ScafM SNP 0039.scaffold00152 595893 1 G T scaffold11860 ScafM SNP 0039.scaffold00152 595902 1 G A scaffold11860 ScafM SNP 0039.scaffold00152 595905 1 A T scaffold11860 ScafM SNP 0039.scaffold00152 595930 2 TA CG scaffold11860 ScafM SNP 0039.scaffold00152 595942 1 T G scaffold11860 ScafM SNP 0039.scaffold00152 595950 1 T A scaffold11860 ScafM SNP 0039.scaffold00152 595971 1 G T scaffold11860 ScafM SNP 0039.scaffold00152 596920 1 C A scaffold3495 ScafM SNP 0039.scaffold00152 596923 1 C T scaffold3495 ScafM SNP 0039.scaffold00152 596951 1 A G scaffold3495 ScafM INDEL 0039.scaffold00152 596958 3 ATT ... scaffold3495 ScafM SNP 0039.scaffold00152 597023 1 A G scaffold3495 ScafM SNP 0039.scaffold00152 597026 1 T C scaffold3495 ScafM SNP 0039.scaffold00152 597029 1 G T scaffold3495 ScafM INDEL 0039.scaffold00152 597059 2 .. AT scaffold3495 ScafM SNP 0039.scaffold00152 597061 1 A T scaffold3495 ScafM INDEL 0039.scaffold00152 597067 2 .. CC scaffold3495 ScafM SNP 0039.scaffold00152 597086 1 G C scaffold3495 ScafM INDEL 0039.scaffold00152 597090 1 . T scaffold3495 ScafM INDEL 0039.scaffold00152 597101 1 . A scaffold3495 ScafM SNP 0039.scaffold00152 597107 1 G A scaffold3495 ScafM SNP 0039.scaffold00152 597144 1 T C scaffold3495 ScafM SNP 0039.scaffold00152 597159 1 A T scaffold3495 ScafM SNP 0039.scaffold00152 597180 1 T C scaffold3495 ScafM SNP 0039.scaffold00152 597189 1 A G scaffold3495 ScafM SNP 0039.scaffold00152 597206 1 G T scaffold3495 ScafM SNP 0039.scaffold00152 597213 1 T C scaffold3495 ReadM SNP 0039.scaffold00152 601802 1 C T - ReadM INDEL 0039.scaffold00152 601874 2 .. TA - ScafM INDEL 0039.scaffold00152 602243 2 .. AA scaffold10312 ScafM SNP 0039.scaffold00152 602469 1 A G scaffold10312 ReadM SNP 0039.scaffold00152 602483 1 T G - ReadM SNP 0039.scaffold00152 602586 1 C T - ReadM SNP 0039.scaffold00152 602636 1 T C - ReadM SNP 0039.scaffold00152 602781 1 A G - ReadM SNP 0039.scaffold00152 602821 1 T G - ReadM SNP 0039.scaffold00152 603031 1 A G - ReadM SNP 0039.scaffold00152 603093 1 A G - ReadM SNP 0039.scaffold00152 603515 1 G A - ScafM SNP 0039.scaffold00152 603678 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 603696 1 C T scaffold10312 ScafM SNP 0039.scaffold00152 603700 1 C T scaffold10312 ScafM SNP 0039.scaffold00152 603702 1 C G scaffold10312 ScafM SNP 0039.scaffold00152 603711 1 G A scaffold10312 ScafM INDEL 0039.scaffold00152 603864 1 T . scaffold10312 ScafM SNP 0039.scaffold00152 603945 2 GA TT scaffold10312 ScafM INDEL 0039.scaffold00152 604096 2 .. AA scaffold10312 ReadM INDEL 0039.scaffold00152 604496 1 T . - ReadM SNP 0039.scaffold00152 604562 1 T C - ReadM SNP 0039.scaffold00152 604585 1 G T - ReadM SNP 0039.scaffold00152 604613 1 G A - ReadM SNP 0039.scaffold00152 605036 1 A G - ReadM SNP 0039.scaffold00152 605195 1 T A - ReadM INDEL 0039.scaffold00152 605215 1 . C - Both SNP 0039.scaffold00152 605449 1 G A scaffold10312 Both SNP 0039.scaffold00152 605549 1 G A scaffold10312 ReadM SNP 0039.scaffold00152 605680 1 A G - ReadM SNP 0039.scaffold00152 605771 1 A G - ReadM SNP 0039.scaffold00152 605907 1 G A - ReadM INDEL 0039.scaffold00152 607518 1 . T - Both SNP 0039.scaffold00152 607652 1 T G scaffold10312 Both SNP 0039.scaffold00152 607692 1 G A scaffold10312 Both SNP 0039.scaffold00152 607710 1 A G scaffold10312 Both SNP 0039.scaffold00152 607866 1 A G scaffold10312 Both SNP 0039.scaffold00152 607888 1 A G scaffold10312 Both SNP 0039.scaffold00152 608005 1 A G scaffold10312 ScafM SNP 0039.scaffold00152 608957 1 T A scaffold10312 ScafM SNP 0039.scaffold00152 609073 1 A T scaffold10312 Both SNP 0039.scaffold00152 609156 1 C A scaffold10312 Both SNP 0039.scaffold00152 609263 1 A G scaffold10312 Both SNP 0039.scaffold00152 609394 1 T C scaffold10312 ReadM SNP 0039.scaffold00152 609941 1 G A - ReadM SNP 0039.scaffold00152 610033 1 A G - ReadM INDEL 0039.scaffold00152 610038 1 . G - ReadM SNP 0039.scaffold00152 610171 1 C T - ReadM SNP 0039.scaffold00152 610241 1 G A - ReadM SNP 0039.scaffold00152 610671 1 T C - ReadM SNP 0039.scaffold00152 610740 1 T C - ReadM SNP 0039.scaffold00152 610773 1 G A - ReadM SNP 0039.scaffold00152 610795 1 C A - ReadM SNP 0039.scaffold00152 611123 1 C T - ReadM SNP 0039.scaffold00152 611257 1 G C - ReadM SNP 0039.scaffold00152 611559 1 T C - ReadM SNP 0039.scaffold00152 611617 1 T C - ScafM SNP 0039.scaffold00152 612013 1 G T scaffold10312 Both SNP 0039.scaffold00152 612045 1 C T scaffold10312 Both SNP 0039.scaffold00152 612165 1 A G scaffold10312 Both SNP 0039.scaffold00152 612392 1 G A scaffold10312 Both SNP 0039.scaffold00152 612654 1 T G scaffold10312 Both SNP 0039.scaffold00152 612689 1 A G scaffold10312 Both SNP 0039.scaffold00152 612715 1 C T scaffold10312 Both INDEL 0039.scaffold00152 612727 1 . A scaffold10312 Both SNP 0039.scaffold00152 612750 1 C T scaffold10312 Both SNP 0039.scaffold00152 612905 1 T G scaffold10312 Both SNP 0039.scaffold00152 612992 1 A G scaffold10312 ScafM SNP 0039.scaffold00152 613122 1 A G scaffold10312 ScafM INDEL 0039.scaffold00152 613177 1 . A scaffold10312 ScafM SNP 0039.scaffold00152 613244 1 G A scaffold10312 ScafM SNP 0039.scaffold00152 613300 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 613319 1 C T scaffold10312 ReadM SNP 0039.scaffold00152 613466 1 T C - ScafM SNP 0039.scaffold00152 613649 1 A T scaffold10312 ScafM SNP 0039.scaffold00152 613695 1 C A scaffold10312 ScafM SNP 0039.scaffold00152 613751 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 613840 1 T G scaffold10312 ScafM INDEL 0039.scaffold00152 613845 1 T . scaffold10312 ScafM SNP 0039.scaffold00152 613853 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 613910 1 A G scaffold10312 Both SNP 0039.scaffold00152 613975 1 T G scaffold10312 Both SNP 0039.scaffold00152 614003 1 C G scaffold10312 Both SNP 0039.scaffold00152 614006 1 A G scaffold10312 Both SNP 0039.scaffold00152 614063 1 A G scaffold10312 ReadM SNP 0039.scaffold00152 614188 1 G A - Both SNP 0039.scaffold00152 614460 1 G A scaffold10312 ReadM SNP 0039.scaffold00152 614531 1 T G - ReadM SNP 0039.scaffold00152 615671 1 T A - ReadM SNP 0039.scaffold00152 615727 1 T C - ReadM SNP 0039.scaffold00152 615818 1 A G - ReadM SNP 0039.scaffold00152 616172 1 C T - ReadM SNP 0039.scaffold00152 616248 1 G C - ReadM SNP 0039.scaffold00152 616277 1 A T - ReadM SNP 0039.scaffold00152 616600 1 T A - ReadM SNP 0039.scaffold00152 616660 1 C G - ReadM SNP 0039.scaffold00152 616770 1 G A - ScafM SNP 0039.scaffold00152 616909 1 A G scaffold10312 ScafM SNP 0039.scaffold00152 616920 1 T C scaffold10312 ScafM SNP 0039.scaffold00152 617070 1 A G scaffold10312 ReadM SNP 0039.scaffold00152 617643 1 T G - ScafM SNP 0039.scaffold00152 619933 1 T C scaffold8461 ScafM SNP 0039.scaffold00152 620055 1 G C scaffold8461 Both INDEL 0039.scaffold00152 620287 1 T . scaffold8461 Both SNP 0039.scaffold00152 620307 1 G C scaffold8461 Both SNP 0039.scaffold00152 620395 1 T C scaffold8461 Both SNP 0039.scaffold00152 620420 1 G T scaffold8461 Both SNP 0039.scaffold00152 620458 1 A T scaffold8461 Both SNP 0039.scaffold00152 620506 1 T G scaffold8461 ReadM SNP 0039.scaffold00152 620601 1 G C - ReadM SNP 0039.scaffold00152 621016 1 T G - ScafM SNP 0039.scaffold00152 622044 1 T G scaffold8461 ScafM INDEL 0039.scaffold00152 622124 1 . A scaffold8461 ScafM INDEL 0039.scaffold00152 622178 1 . A scaffold8461 ScafM INDEL 0039.scaffold00152 622303 46 .............................................. TTTTTTTTTTTTTTTTTTTTTTTGAGGGGAAAGTGATTGATTTTCT scaffold8461 ScafM SNP 0039.scaffold00152 622313 1 A G scaffold8461 ScafM INDEL 0039.scaffold00152 622370 1 T . scaffold8461 ScafM SNP 0039.scaffold00152 622412 1 C T scaffold8461 Both SNP 0039.scaffold00152 622540 1 T C scaffold8461 ScafM SNP 0039.scaffold00152 622661 1 A G scaffold8461 Both SNP 0039.scaffold00152 622798 1 A G scaffold8461 ScafM SNP 0039.scaffold00152 622815 1 T G scaffold8461 ScafM SNP 0039.scaffold00152 622817 1 G A scaffold8461 Both SNP 0039.scaffold00152 622901 1 C T scaffold8461 Both SNP 0039.scaffold00152 623057 1 T A scaffold8461 Both SNP 0039.scaffold00152 623132 1 C A scaffold8461 Both SNP 0039.scaffold00152 623481 1 G A scaffold8461 Both SNP 0039.scaffold00152 623659 1 G A scaffold8461 Both SNP 0039.scaffold00152 623773 1 T C scaffold8461 Both SNP 0039.scaffold00152 623795 1 G C scaffold8461 ReadM SNP 0039.scaffold00152 624220 1 G A - ReadM INDEL 0039.scaffold00152 624388 1 . G - ReadM SNP 0039.scaffold00152 624472 1 A G - ScafM INDEL 0039.scaffold00152 624529 7 ....... TATGACA scaffold8461 Both SNP 0039.scaffold00152 624549 1 G T scaffold8461 ReadM SNP 0039.scaffold00152 624640 1 G A - ReadM SNP 0039.scaffold00152 624649 1 C A - ScafM SNP 0039.scaffold00152 624742 1 A T scaffold8461 Both SNP 0039.scaffold00152 624781 1 A G scaffold8461 Both SNP 0039.scaffold00152 624798 1 T C scaffold8461 ScafM SNP 0039.scaffold00152 624849 2 AC CA scaffold8461 Both SNP 0039.scaffold00152 624882 1 C T scaffold8461 Both INDEL 0039.scaffold00152 625120 1 . T scaffold8461 Both SNP 0039.scaffold00152 625144 1 T C scaffold8461 Both SNP 0039.scaffold00152 625154 1 C A scaffold8461 Both SNP 0039.scaffold00152 625224 1 A T scaffold8461 Both SNP 0039.scaffold00152 625276 1 C G scaffold8461 ScafM SNP 0039.scaffold00152 625381 1 T C scaffold8461 ScafM INDEL 0039.scaffold00152 625453 4 TGAG .... scaffold8461 ScafM SNP 0039.scaffold00152 625477 1 A T scaffold8461 ScafM SNP 0039.scaffold00152 631653 1 G A scaffold17451 ReadM INDEL 0039.scaffold00152 632166 1 . C - ReadM SNP 0039.scaffold00152 635369 1 C T - ReadM INDEL 0039.scaffold00152 635840 1 C . - ReadM SNP 0039.scaffold00152 635912 1 A T - ReadM SNP 0039.scaffold00152 635971 1 G A - ReadM SNP 0039.scaffold00152 635994 1 T C - ReadM SNP 0039.scaffold00152 636038 1 G C - ReadM SNP 0039.scaffold00152 636107 1 C A - ReadM SNP 0039.scaffold00152 636114 1 A T - ReadM SNP 0039.scaffold00152 636272 1 G A - ReadM INDEL 0039.scaffold00152 636356 1 T . - ReadM SNP 0039.scaffold00152 636437 1 C T - ScafM SNP 0039.scaffold00152 636480 1 T C scaffold17451 Both SNP 0039.scaffold00152 637143 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 637593 2 TT CC scaffold17451 Both SNP 0039.scaffold00152 637719 1 T G scaffold17451 Both SNP 0039.scaffold00152 637741 1 C T scaffold17451 Both SNP 0039.scaffold00152 637778 1 A G scaffold17451 Both SNP 0039.scaffold00152 637874 1 T C scaffold17451 Both SNP 0039.scaffold00152 637881 1 C T scaffold17451 Both SNP 0039.scaffold00152 637928 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 637959 1 A G scaffold17451 ScafM SNP 0039.scaffold00152 637991 1 C T scaffold17451 ScafM SNP 0039.scaffold00152 638024 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 638072 1 G A scaffold17451 Both SNP 0039.scaffold00152 638168 1 T C scaffold17451 Both SNP 0039.scaffold00152 638267 1 C A scaffold17451 Both SNP 0039.scaffold00152 638312 1 C T scaffold17451 ReadM SNP 0039.scaffold00152 638430 1 G C - Both INDEL 0039.scaffold00152 639027 2 GG .. scaffold17451 Both SNP 0039.scaffold00152 639146 1 G T scaffold17451 ScafM INDEL 0039.scaffold00152 639327 1 . T scaffold17451 Both SNP 0039.scaffold00152 639557 1 C T scaffold17451 Both SNP 0039.scaffold00152 639738 1 C T scaffold17451 ScafM INDEL 0039.scaffold00152 639977 5 TAATT ..... scaffold17451 Both SNP 0039.scaffold00152 640003 1 A G scaffold17451 Both SNP 0039.scaffold00152 640179 1 T C scaffold17451 Both SNP 0039.scaffold00152 640204 1 G T scaffold17451 ReadM SNP 0039.scaffold00152 640254 1 A G - ReadM SNP 0039.scaffold00152 640292 1 A G - ReadM INDEL 0039.scaffold00152 640311 1 . T - ReadM SNP 0039.scaffold00152 640455 1 C T - ScafM SNP 0039.scaffold00152 640695 1 T G scaffold17451 ScafM SNP 0039.scaffold00152 640707 1 G A scaffold17451 ScafM SNP 0039.scaffold00152 641316 1 T G scaffold17451 ScafM INDEL 0039.scaffold00152 641461 1 . A scaffold17451 Both SNP 0039.scaffold00152 641585 1 G A scaffold17451 Both SNP 0039.scaffold00152 641704 1 A T scaffold17451 ScafM SNP 0039.scaffold00152 641843 1 T C scaffold17451 Both SNP 0039.scaffold00152 642647 1 G A scaffold17451 Both SNP 0039.scaffold00152 642943 1 T C scaffold17451 Both SNP 0039.scaffold00152 643001 1 A T scaffold17451 ReadM SNP 0039.scaffold00152 643086 1 C T - ReadM SNP 0039.scaffold00152 643099 1 C T - Both SNP 0039.scaffold00152 643118 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 643144 1 T G scaffold17451 ScafM SNP 0039.scaffold00152 643173 1 C T scaffold17451 ScafM SNP 0039.scaffold00152 643323 1 C T scaffold17451 ScafM SNP 0039.scaffold00152 643328 1 A C scaffold17451 Both INDEL 0039.scaffold00152 644122 1 . G scaffold17451 ScafM INDEL 0039.scaffold00152 644355 1 T . scaffold17451 ScafM INDEL 0039.scaffold00152 644416 2 TA .. scaffold17451 ScafM SNP 0039.scaffold00152 644447 1 C T scaffold17451 ReadM SNP 0039.scaffold00152 644562 1 G A - Both SNP 0039.scaffold00152 644708 1 C T scaffold17451 ScafM SNP 0039.scaffold00152 644920 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 645206 1 G A scaffold17451 Both SNP 0039.scaffold00152 645343 1 G T scaffold17451 Both SNP 0039.scaffold00152 645413 1 A G scaffold17451 Both SNP 0039.scaffold00152 645434 1 T C scaffold17451 ReadM SNP 0039.scaffold00152 645491 1 G A - ReadM SNP 0039.scaffold00152 645577 1 G A - ReadM SNP 0039.scaffold00152 645804 1 G T - ReadM SNP 0039.scaffold00152 645919 1 A G - ReadM SNP 0039.scaffold00152 645960 1 A G - ReadM INDEL 0039.scaffold00152 645967 1 A . - ReadM INDEL 0039.scaffold00152 645993 1 T . - ReadM SNP 0039.scaffold00152 646142 1 C T - ReadM SNP 0039.scaffold00152 646144 1 G T - ReadM SNP 0039.scaffold00152 646156 1 T C - ReadM SNP 0039.scaffold00152 646401 1 A G - ReadM INDEL 0039.scaffold00152 646437 1 . A - ReadM SNP 0039.scaffold00152 646466 1 A G - ReadM INDEL 0039.scaffold00152 646494 2 .. TT - ReadM SNP 0039.scaffold00152 646574 1 C T - ReadM SNP 0039.scaffold00152 646840 1 C A - Both SNP 0039.scaffold00152 647005 1 C T scaffold17451 Both SNP 0039.scaffold00152 647053 1 G T scaffold17451 ScafM SNP 0039.scaffold00152 647064 1 C A scaffold17451 ScafM SNP 0039.scaffold00152 647066 1 T C scaffold17451 ScafM SNP 0039.scaffold00152 647102 1 T C scaffold17451 ScafM INDEL 0039.scaffold00152 647138 3 TAT ... scaffold17451 ScafM SNP 0039.scaffold00152 647168 1 A G scaffold17451 ScafM SNP 0039.scaffold00152 647171 2 GA TG scaffold17451 ScafM INDEL 0039.scaffold00152 647217 22 AGCGAAAATTTGAGCTTCATGA ...................... scaffold17451 Both SNP 0039.scaffold00152 647249 1 A T scaffold17451 ScafM INDEL 0039.scaffold00152 648677 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648686 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648692 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648708 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648710 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648736 1 T . scaffold1207 ScafM INDEL 0039.scaffold00152 648859 2 .. TT scaffold1207 ScafM SNP 0039.scaffold00152 648870 1 G T scaffold1207 ScafM SNP 0039.scaffold00152 648934 1 T C scaffold1207 ScafM SNP 0039.scaffold00152 650698 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 650791 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 651091 1 A G - ReadM SNP 0039.scaffold00152 651186 1 G A - ReadM SNP 0039.scaffold00152 651201 1 T C - ReadM SNP 0039.scaffold00152 651451 1 T C - ReadM SNP 0039.scaffold00152 651589 1 T C - ReadM SNP 0039.scaffold00152 651623 1 G T - Both INDEL 0039.scaffold00152 651688 1 T . scaffold6087 Both SNP 0039.scaffold00152 651732 1 G T scaffold6087 ReadM SNP 0039.scaffold00152 651802 1 T C - ReadM SNP 0039.scaffold00152 652099 1 A C - Both INDEL 0039.scaffold00152 652208 1 A . scaffold6087 Both SNP 0039.scaffold00152 652327 1 A G scaffold6087 Both INDEL 0039.scaffold00152 652374 1 . A scaffold6087 Both SNP 0039.scaffold00152 652494 1 T C scaffold6087 Both SNP 0039.scaffold00152 652537 1 C A scaffold6087 Both SNP 0039.scaffold00152 652612 1 C T scaffold6087 Both SNP 0039.scaffold00152 652650 1 A G scaffold6087 ScafM INDEL 0039.scaffold00152 652681 11 TACTCCGATCC ........... scaffold6087 Both SNP 0039.scaffold00152 652766 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 652872 1 G T - Both SNP 0039.scaffold00152 652912 1 T C scaffold6087 Both SNP 0039.scaffold00152 652923 1 A C scaffold6087 Both INDEL 0039.scaffold00152 652945 1 G . scaffold6087 ScafM INDEL 0039.scaffold00152 653022 6 ...... CGCTGC scaffold6087 ScafM SNP 0039.scaffold00152 653042 1 T C scaffold6087 Both SNP 0039.scaffold00152 653062 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 653083 2 AG GA scaffold6087 Both SNP 0039.scaffold00152 653233 1 C T scaffold6087 Both SNP 0039.scaffold00152 653327 1 T C scaffold6087 Both SNP 0039.scaffold00152 653372 1 A G scaffold6087 Both SNP 0039.scaffold00152 653698 1 A G scaffold6087 ReadM SNP 0039.scaffold00152 653780 1 T A - Both INDEL 0039.scaffold00152 653815 1 A . scaffold6087 Both SNP 0039.scaffold00152 653837 1 A T scaffold6087 ScafM INDEL 0039.scaffold00152 653903 2 TT .. scaffold6087 ScafM SNP 0039.scaffold00152 653961 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 653965 1 T A scaffold6087 Both SNP 0039.scaffold00152 654015 1 C G scaffold6087 Both SNP 0039.scaffold00152 654130 1 A G scaffold6087 Both SNP 0039.scaffold00152 654272 1 C A scaffold6087 Both SNP 0039.scaffold00152 654311 1 T C scaffold6087 Both SNP 0039.scaffold00152 655448 1 T A scaffold6087 Both SNP 0039.scaffold00152 655586 1 T C scaffold6087 Both SNP 0039.scaffold00152 655901 1 G T scaffold6087 Both SNP 0039.scaffold00152 656081 1 A G scaffold6087 ReadM SNP 0039.scaffold00152 656230 1 C T - ScafM INDEL 0039.scaffold00152 656477 15 AACTGTTGTAATGCT ............... scaffold6087 Both SNP 0039.scaffold00152 656505 1 A G scaffold6087 Both SNP 0039.scaffold00152 656761 1 C G scaffold6087 Both SNP 0039.scaffold00152 656880 1 G A scaffold6087 Both SNP 0039.scaffold00152 656908 1 A T scaffold6087 Both SNP 0039.scaffold00152 656950 1 G A scaffold6087 Both INDEL 0039.scaffold00152 657090 3 ... AAG scaffold6087 ReadM INDEL 0039.scaffold00152 657092 3 ... GAC - Both SNP 0039.scaffold00152 657168 1 A T scaffold6087 Both SNP 0039.scaffold00152 657331 1 T C scaffold6087 Both SNP 0039.scaffold00152 657540 1 A G scaffold6087 Both SNP 0039.scaffold00152 657555 1 G C scaffold6087 Both SNP 0039.scaffold00152 657573 1 A G scaffold6087 Both INDEL 0039.scaffold00152 657604 1 . T scaffold6087 Both SNP 0039.scaffold00152 657638 1 A G scaffold6087 Both SNP 0039.scaffold00152 657684 1 A T scaffold6087 ScafM SNP 0039.scaffold00152 657702 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 657706 1 C T scaffold6087 Both SNP 0039.scaffold00152 657729 1 C T scaffold6087 Both SNP 0039.scaffold00152 657794 1 T C scaffold6087 Both SNP 0039.scaffold00152 657871 1 A G scaffold6087 Both SNP 0039.scaffold00152 657934 2 TC GA scaffold6087 Both INDEL 0039.scaffold00152 658128 2 AA .. scaffold6087 Both INDEL 0039.scaffold00152 658239 1 A . scaffold6087 Both SNP 0039.scaffold00152 658261 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 658314 3 ... ACG scaffold6087 ScafM SNP 0039.scaffold00152 658316 1 T G scaffold6087 Both SNP 0039.scaffold00152 658331 1 C T scaffold6087 Both SNP 0039.scaffold00152 658349 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 658474 1 T C - ReadM SNP 0039.scaffold00152 658549 1 A G - ReadM SNP 0039.scaffold00152 658588 1 G C - ReadM SNP 0039.scaffold00152 658665 1 A C - ReadM SNP 0039.scaffold00152 658713 1 A C - ReadM SNP 0039.scaffold00152 658874 1 C T - ReadM SNP 0039.scaffold00152 658888 1 C A - ReadM SNP 0039.scaffold00152 658892 1 C T - ReadM SNP 0039.scaffold00152 659003 1 T G - ReadM SNP 0039.scaffold00152 659100 1 C T - ReadM SNP 0039.scaffold00152 659149 1 C G - ReadM SNP 0039.scaffold00152 659155 1 G A - ReadM SNP 0039.scaffold00152 659231 1 G A - ReadM SNP 0039.scaffold00152 659287 1 C A - ReadM SNP 0039.scaffold00152 659530 1 C A - ReadM INDEL 0039.scaffold00152 659586 1 T . - ReadM SNP 0039.scaffold00152 659695 1 A G - ReadM SNP 0039.scaffold00152 659792 1 A G - Both SNP 0039.scaffold00152 659856 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 659918 1 T C - ReadM SNP 0039.scaffold00152 659920 1 G A - ReadM INDEL 0039.scaffold00152 659961 3 TTA ... - ReadM SNP 0039.scaffold00152 660104 1 G T - ReadM SNP 0039.scaffold00152 660217 1 G A - ReadM SNP 0039.scaffold00152 660248 1 T C - ReadM SNP 0039.scaffold00152 660310 1 C T - ReadM SNP 0039.scaffold00152 660329 1 G A - ReadM INDEL 0039.scaffold00152 660353 1 A . - Both SNP 0039.scaffold00152 660465 1 G A scaffold6087 Both SNP 0039.scaffold00152 660476 1 G A scaffold6087 Both SNP 0039.scaffold00152 660501 1 C T scaffold6087 Both SNP 0039.scaffold00152 660596 1 C T scaffold6087 Both SNP 0039.scaffold00152 660642 1 G C scaffold6087 Both SNP 0039.scaffold00152 660658 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 660715 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 660729 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 660769 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 660803 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 660861 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 660963 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 661049 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 661104 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 662229 1 . T scaffold11456 ScafM INDEL 0039.scaffold00152 662240 1 T . scaffold11456 ScafM SNP 0039.scaffold00152 662243 1 T A scaffold11456 ScafM SNP 0039.scaffold00152 662283 1 G T scaffold11456 ScafM SNP 0039.scaffold00152 662296 1 T C scaffold11456 ScafM SNP 0039.scaffold00152 662324 1 A G scaffold11456 ScafM SNP 0039.scaffold00152 662750 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 662769 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 662788 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 662874 1 G C scaffold6087 ScafM SNP 0039.scaffold00152 662995 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 663000 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 663025 2 TT CC scaffold6087 ScafM INDEL 0039.scaffold00152 663034 3 GGC ... scaffold6087 ScafM SNP 0039.scaffold00152 663079 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 663085 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 663147 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 663181 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 663232 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 663237 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 663256 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 663318 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 663431 1 A G scaffold6087 ReadM SNP 0039.scaffold00152 664431 1 T C - ScafM SNP 0039.scaffold00152 664952 1 G T scaffold6087 ReadM SNP 0039.scaffold00152 665123 1 A G - ReadM SNP 0039.scaffold00152 665904 1 A G - ReadM SNP 0039.scaffold00152 665909 1 A C - ReadM SNP 0039.scaffold00152 665915 1 T C - ScafM SNP 0039.scaffold00152 668413 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 668832 1 G T scaffold6087 ScafM INDEL 0039.scaffold00152 668882 1 . G scaffold6087 ScafM INDEL 0039.scaffold00152 668957 2 .. TT scaffold6087 ScafM INDEL 0039.scaffold00152 669108 2 AT .. scaffold6087 ScafM SNP 0039.scaffold00152 669249 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 669437 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 669612 4 .... GTTA scaffold6087 Both SNP 0039.scaffold00152 669789 1 C T scaffold6087 Both SNP 0039.scaffold00152 669839 1 C T scaffold6087 Both SNP 0039.scaffold00152 669898 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 670088 10 AAGTTGATTT .......... scaffold6087 Both SNP 0039.scaffold00152 670258 1 C G scaffold6087 Both SNP 0039.scaffold00152 670267 1 A C scaffold6087 Both SNP 0039.scaffold00152 670363 1 G C scaffold6087 Both SNP 0039.scaffold00152 670591 1 T C scaffold6087 Both SNP 0039.scaffold00152 670641 1 G T scaffold6087 Both SNP 0039.scaffold00152 670672 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 670898 1 G T - ReadM SNP 0039.scaffold00152 671025 1 T C - Both SNP 0039.scaffold00152 671211 1 T C scaffold6087 Both SNP 0039.scaffold00152 671225 1 A G scaffold6087 Both SNP 0039.scaffold00152 671269 1 T A scaffold6087 Both SNP 0039.scaffold00152 671419 1 A G scaffold6087 Both SNP 0039.scaffold00152 671515 1 G C scaffold6087 Both SNP 0039.scaffold00152 671549 1 T A scaffold6087 Both SNP 0039.scaffold00152 671585 1 G T scaffold6087 Both SNP 0039.scaffold00152 671617 1 T C scaffold6087 Both SNP 0039.scaffold00152 671620 1 C T scaffold6087 Both SNP 0039.scaffold00152 671801 1 C T scaffold6087 Both SNP 0039.scaffold00152 671973 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 672061 2 GT TA scaffold6087 Both SNP 0039.scaffold00152 672144 1 G A scaffold6087 Both SNP 0039.scaffold00152 672241 1 C A scaffold6087 Both SNP 0039.scaffold00152 672671 1 G T scaffold6087 Both SNP 0039.scaffold00152 672751 1 C A scaffold6087 Both SNP 0039.scaffold00152 672797 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 672938 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 672951 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673004 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673009 1 A T scaffold6087 ScafM SNP 0039.scaffold00152 673017 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 673023 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673052 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 673088 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 673091 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673105 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 673125 1 A T scaffold6087 ScafM SNP 0039.scaffold00152 673129 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 673143 1 G C scaffold6087 ScafM INDEL 0039.scaffold00152 673144 1 . G scaffold6087 ScafM SNP 0039.scaffold00152 673150 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 673167 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 673178 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 673186 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 673193 1 T C scaffold6087 Both SNP 0039.scaffold00152 673205 1 G T scaffold6087 Both SNP 0039.scaffold00152 673352 1 T C scaffold6087 Both SNP 0039.scaffold00152 673409 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 673426 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673443 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 673455 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 673493 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673550 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673579 1 C T scaffold6087 ScafM INDEL 0039.scaffold00152 673595 3 AAG ... scaffold6087 ScafM INDEL 0039.scaffold00152 673606 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 673612 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 673621 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673718 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 673746 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 673749 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 673755 2 .. AT scaffold6087 ScafM INDEL 0039.scaffold00152 673759 1 . G scaffold6087 ScafM SNP 0039.scaffold00152 673767 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 673774 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673802 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 673804 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 673811 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 673813 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 673821 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673848 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 673899 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673914 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 673928 1 G T scaffold6087 ScafM INDEL 0039.scaffold00152 673948 3 CCC ... scaffold6087 ScafM SNP 0039.scaffold00152 673952 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 673956 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 673974 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 674269 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 674273 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 674275 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 674280 1 . T scaffold6087 ScafM SNP 0039.scaffold00152 674299 1 T A scaffold6087 ScafM INDEL 0039.scaffold00152 674306 2 AT .. scaffold6087 ScafM SNP 0039.scaffold00152 674313 2 TA CT scaffold6087 ScafM SNP 0039.scaffold00152 674337 1 G C scaffold6087 ScafM SNP 0039.scaffold00152 674346 1 A T scaffold6087 ScafM SNP 0039.scaffold00152 680166 2 CC TG scaffold17769 ScafM SNP 0039.scaffold00152 680191 1 T A scaffold17769 ScafM INDEL 0039.scaffold00152 680221 13 GCTAATTAAGTTT ............. scaffold17769 ScafM SNP 0039.scaffold00152 680256 1 G A scaffold17769 ScafM SNP 0039.scaffold00152 680283 1 G A scaffold17769 ScafM SNP 0039.scaffold00152 680333 1 T C scaffold17769 ScafM SNP 0039.scaffold00152 680374 1 C A scaffold17769 ScafM SNP 0039.scaffold00152 680378 1 C T scaffold17769 ReadM SNP 0039.scaffold00152 700051 2 TT GC - ReadM INDEL 0039.scaffold00152 700521 1 . A - ReadM SNP 0039.scaffold00152 700576 1 T C - ScafM SNP 0039.scaffold00152 701539 1 T G scaffold17331 ScafM SNP 0039.scaffold00152 701578 1 A C scaffold17331 ScafM SNP 0039.scaffold00152 701638 1 A G scaffold17331 ScafM INDEL 0039.scaffold00152 701666 1 T . scaffold17331 ScafM INDEL 0039.scaffold00152 701677 4 .... GAAT scaffold17331 ScafM SNP 0039.scaffold00152 707535 1 T C scaffold8100 ScafM SNP 0039.scaffold00152 707546 2 AA CT scaffold8100 ScafM SNP 0039.scaffold00152 707553 1 G T scaffold8100 ScafM SNP 0039.scaffold00152 707579 1 T G scaffold8100 ScafM SNP 0039.scaffold00152 707595 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707601 2 CA TG scaffold8100 ScafM SNP 0039.scaffold00152 707607 1 A C scaffold8100 ScafM SNP 0039.scaffold00152 707614 1 G A scaffold8100 ScafM INDEL 0039.scaffold00152 707663 3 ... AAT scaffold8100 ScafM SNP 0039.scaffold00152 707668 1 C A scaffold8100 ScafM SNP 0039.scaffold00152 707687 1 G A scaffold8100 ScafM SNP 0039.scaffold00152 707690 1 T G scaffold8100 ScafM SNP 0039.scaffold00152 707702 1 A G scaffold8100 ScafM SNP 0039.scaffold00152 707734 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707750 1 T C scaffold8100 ScafM INDEL 0039.scaffold00152 707767 1 . G scaffold8100 ScafM SNP 0039.scaffold00152 707774 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707788 1 C A scaffold8100 ScafM SNP 0039.scaffold00152 707790 1 T C scaffold8100 ScafM SNP 0039.scaffold00152 707847 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707864 1 G A scaffold8100 ScafM SNP 0039.scaffold00152 707887 1 T C scaffold8100 ScafM SNP 0039.scaffold00152 707898 1 T C scaffold8100 ScafM SNP 0039.scaffold00152 707913 1 A G scaffold8100 ScafM SNP 0039.scaffold00152 707936 1 G T scaffold8100 ScafM SNP 0039.scaffold00152 707954 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707968 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 707984 1 A C scaffold8100 ScafM SNP 0039.scaffold00152 707998 1 G T scaffold8100 ScafM SNP 0039.scaffold00152 708003 1 G A scaffold8100 ScafM SNP 0039.scaffold00152 708023 1 A G scaffold8100 ScafM SNP 0039.scaffold00152 708028 1 A T scaffold8100 ScafM SNP 0039.scaffold00152 708041 1 C G scaffold8100 ScafM SNP 0039.scaffold00152 708043 1 G A scaffold8100 ScafM SNP 0039.scaffold00152 708053 2 TT CC scaffold8100 ScafM INDEL 0039.scaffold00152 708066 1 . C scaffold8100 ScafM SNP 0039.scaffold00152 708076 1 A T scaffold8100 ScafM SNP 0039.scaffold00152 708108 1 C T scaffold8100 ScafM SNP 0039.scaffold00152 708121 1 A G scaffold8100 ScafM SNP 0039.scaffold00152 708135 2 TG CA scaffold8100 ScafM SNP 0039.scaffold00152 712868 1 A T scaffold27704 ScafM SNP 0039.scaffold00152 712875 2 CT TC scaffold27704 ScafM SNP 0039.scaffold00152 712891 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 712893 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 712916 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 712924 1 C T scaffold27704 ScafM INDEL 0039.scaffold00152 712928 2 .. CT scaffold27704 ScafM SNP 0039.scaffold00152 712932 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 712934 1 C G scaffold27704 ScafM SNP 0039.scaffold00152 712936 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 712939 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 712944 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 712953 1 C A scaffold27704 ScafM SNP 0039.scaffold00152 712982 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 712985 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 712987 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 712998 1 T G scaffold27704 ScafM SNP 0039.scaffold00152 713018 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713025 2 TA CG scaffold27704 ScafM SNP 0039.scaffold00152 713028 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713037 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713053 2 CT TC scaffold27704 ScafM SNP 0039.scaffold00152 713063 1 C A scaffold27704 ScafM SNP 0039.scaffold00152 713068 2 CG TA scaffold27704 ScafM SNP 0039.scaffold00152 713071 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713080 1 G A scaffold27704 ScafM INDEL 0039.scaffold00152 713092 1 . A scaffold27704 ScafM SNP 0039.scaffold00152 713099 2 TG AC scaffold27704 ScafM SNP 0039.scaffold00152 713102 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713109 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713112 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713142 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713144 2 CA TG scaffold27704 ScafM SNP 0039.scaffold00152 713158 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713193 1 T A scaffold27704 ScafM SNP 0039.scaffold00152 713196 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713205 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713207 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713216 1 G C scaffold27704 ScafM SNP 0039.scaffold00152 713238 1 T A scaffold27704 ScafM SNP 0039.scaffold00152 713252 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713280 1 G T scaffold27704 ScafM SNP 0039.scaffold00152 713289 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713292 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713294 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713321 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713328 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713336 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713339 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713366 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713380 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713388 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713394 1 T G scaffold27704 ScafM SNP 0039.scaffold00152 713422 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713424 1 G A scaffold27704 ScafM INDEL 0039.scaffold00152 713429 5 ACGCT ..... scaffold27704 ScafM SNP 0039.scaffold00152 713447 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713453 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713463 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713465 1 C A scaffold27704 ScafM SNP 0039.scaffold00152 713476 2 CG TA scaffold27704 ScafM SNP 0039.scaffold00152 713479 1 G A scaffold27704 ScafM INDEL 0039.scaffold00152 713483 1 G . scaffold27704 ScafM SNP 0039.scaffold00152 713502 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713505 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713522 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713535 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713542 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713553 1 C A scaffold27704 ScafM SNP 0039.scaffold00152 713559 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713561 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713578 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713588 1 C T scaffold27704 ScafM INDEL 0039.scaffold00152 713611 3 CAA ... scaffold27704 ScafM INDEL 0039.scaffold00152 713615 1 G . scaffold27704 ScafM INDEL 0039.scaffold00152 713617 1 T . scaffold27704 ScafM INDEL 0039.scaffold00152 713619 3 TTT ... scaffold27704 ScafM INDEL 0039.scaffold00152 713623 1 T . scaffold27704 ScafM SNP 0039.scaffold00152 713636 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713642 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713654 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713656 1 C G scaffold27704 ScafM SNP 0039.scaffold00152 713682 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713686 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713691 1 T G scaffold27704 ScafM SNP 0039.scaffold00152 713696 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713701 1 G C scaffold27704 ScafM SNP 0039.scaffold00152 713705 1 C T scaffold27704 ScafM SNP 0039.scaffold00152 713723 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713731 1 T G scaffold27704 ScafM SNP 0039.scaffold00152 713736 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713760 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713785 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713814 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 713838 1 G A scaffold27704 ScafM SNP 0039.scaffold00152 713856 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713882 1 T C scaffold27704 ScafM SNP 0039.scaffold00152 713897 1 A C scaffold27704 ScafM SNP 0039.scaffold00152 713917 1 A G scaffold27704 ScafM SNP 0039.scaffold00152 717130 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 717157 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 717163 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 717170 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717178 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717181 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 717183 2 AT GA scaffold3549 ScafM SNP 0039.scaffold00152 717188 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717208 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717211 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 717214 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717235 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 717244 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 717247 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717249 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717254 2 GG AT scaffold3549 ScafM SNP 0039.scaffold00152 717258 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717260 1 G T scaffold3549 ScafM SNP 0039.scaffold00152 717268 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 717271 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 717280 1 A T scaffold3549 ScafM SNP 0039.scaffold00152 717301 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 717303 2 CA GG scaffold3549 ScafM SNP 0039.scaffold00152 717315 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717323 1 G A scaffold3549 ScafM INDEL 0039.scaffold00152 717328 1 A . scaffold3549 ScafM SNP 0039.scaffold00152 717330 1 A T scaffold3549 ScafM INDEL 0039.scaffold00152 717334 1 T . scaffold3549 ScafM SNP 0039.scaffold00152 717339 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 717343 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 717348 1 A T scaffold3549 ScafM SNP 0039.scaffold00152 717354 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 717357 1 C A scaffold3549 ScafM SNP 0039.scaffold00152 717363 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 717366 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717369 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 717386 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717389 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 717392 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 717403 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 717980 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 717985 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 717988 2 CA GC scaffold3549 ScafM SNP 0039.scaffold00152 718005 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 718014 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718024 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718030 1 C A scaffold3549 ScafM SNP 0039.scaffold00152 718032 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 718034 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718040 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 718064 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718072 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 718084 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 718091 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 718093 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718103 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718105 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 718109 1 A T scaffold3549 ScafM SNP 0039.scaffold00152 718115 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718119 1 G T scaffold3549 ScafM SNP 0039.scaffold00152 718123 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 718135 2 AT TC scaffold3549 ScafM SNP 0039.scaffold00152 718154 2 TT AA scaffold3549 ScafM SNP 0039.scaffold00152 718160 1 G C scaffold3549 ScafM SNP 0039.scaffold00152 718164 1 C A scaffold3549 ScafM SNP 0039.scaffold00152 718183 2 AT CA scaffold3549 ScafM SNP 0039.scaffold00152 718186 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 718194 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 718196 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718211 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718214 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 718763 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 718771 1 C T scaffold3549 ScafM INDEL 0039.scaffold00152 718772 3 ... TGT scaffold3549 ScafM INDEL 0039.scaffold00152 718773 1 . G scaffold3549 ScafM SNP 0039.scaffold00152 718781 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718783 1 C T scaffold3549 ScafM INDEL 0039.scaffold00152 718785 2 .. CA scaffold3549 ScafM INDEL 0039.scaffold00152 718788 2 .A GG scaffold3549 ScafM SNP 0039.scaffold00152 718800 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 718816 2 AG GA scaffold3549 ScafM SNP 0039.scaffold00152 718821 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718834 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 718856 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 718869 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718878 2 AC GT scaffold3549 ScafM SNP 0039.scaffold00152 718882 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 718884 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 719045 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 719066 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 719073 1 T C scaffold3549 ScafM INDEL 0039.scaffold00152 719074 2 .. CT scaffold3549 ScafM SNP 0039.scaffold00152 719091 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 719105 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 719112 1 A T scaffold3549 ScafM SNP 0039.scaffold00152 719114 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 719140 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 719143 2 AC GA scaffold3549 ScafM SNP 0039.scaffold00152 719148 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719151 1 C A scaffold3549 ScafM INDEL 0039.scaffold00152 719152 1 . G scaffold3549 ScafM SNP 0039.scaffold00152 719159 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 719165 1 T A scaffold3549 ScafM SNP 0039.scaffold00152 719176 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 719180 1 G T scaffold3549 ScafM SNP 0039.scaffold00152 719185 2 TG CT scaffold3549 ScafM SNP 0039.scaffold00152 719189 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719213 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 719225 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719229 1 G C scaffold3549 ScafM SNP 0039.scaffold00152 719254 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 719256 1 A T scaffold3549 ScafM SNP 0039.scaffold00152 719264 1 A G scaffold3549 ScafM INDEL 0039.scaffold00152 719274 10 .......... CCCCTGTGAT scaffold3549 ScafM SNP 0039.scaffold00152 719278 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 719285 1 A C scaffold3549 ScafM INDEL 0039.scaffold00152 719294 1 C . scaffold3549 ScafM SNP 0039.scaffold00152 719303 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 719315 1 A C scaffold3549 ScafM SNP 0039.scaffold00152 719328 1 T C scaffold3549 ScafM SNP 0039.scaffold00152 719337 2 TC AT scaffold3549 ScafM SNP 0039.scaffold00152 719345 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719350 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 719353 1 C A scaffold3549 ScafM SNP 0039.scaffold00152 719359 1 T G scaffold3549 ScafM SNP 0039.scaffold00152 719365 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 719371 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719382 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719395 1 G A scaffold3549 ScafM SNP 0039.scaffold00152 719408 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 719418 1 C T scaffold3549 ScafM SNP 0039.scaffold00152 719420 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 719428 4 GTTT AAAC scaffold3549 ScafM SNP 0039.scaffold00152 719435 1 A G scaffold3549 ScafM SNP 0039.scaffold00152 720750 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 720771 1 G T scaffold6087 ScafM INDEL 0039.scaffold00152 720773 1 T . scaffold6087 ScafM SNP 0039.scaffold00152 720815 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 720836 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 720884 3 TTT ... scaffold6087 ScafM SNP 0039.scaffold00152 720894 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 720914 1 T . scaffold6087 ScafM SNP 0039.scaffold00152 720934 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 720967 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 720972 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 720980 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 721000 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 721025 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 721099 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 721116 1 C T scaffold6087 ScafM INDEL 0039.scaffold00152 721126 5 CAAGT ..... scaffold6087 ScafM SNP 0039.scaffold00152 721134 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 721161 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 721340 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 721345 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 721360 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 721397 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 721431 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 721438 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 721452 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 721471 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 721545 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 721553 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 721558 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 727785 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 729652 1 G C scaffold6087 ScafM SNP 0039.scaffold00152 729872 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 730617 3 ACT ... scaffold6087 ScafM SNP 0039.scaffold00152 730649 1 A T scaffold6087 ScafM SNP 0039.scaffold00152 730653 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 734372 1 C T scaffold6087 ScafM INDEL 0039.scaffold00152 734480 1 G . scaffold6087 ScafM SNP 0039.scaffold00152 734535 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 734545 1 G A scaffold6087 ReadM SNP 0039.scaffold00152 735012 1 A G - Both SNP 0039.scaffold00152 735163 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 735349 1 T C - ReadM SNP 0039.scaffold00152 735367 1 T A - Both SNP 0039.scaffold00152 735617 1 T G scaffold6087 Both SNP 0039.scaffold00152 735762 1 A C scaffold6087 Both SNP 0039.scaffold00152 735866 1 G A scaffold6087 Both INDEL 0039.scaffold00152 736142 1 . C scaffold6087 ScafM SNP 0039.scaffold00152 736190 2 AT TA scaffold6087 Both SNP 0039.scaffold00152 736242 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 736330 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 736391 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 736418 1 T A scaffold6087 ScafM INDEL 0039.scaffold00152 736419 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 736421 2 CT AA scaffold6087 ScafM INDEL 0039.scaffold00152 736423 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 736428 5 AAAGA CTCAT scaffold6087 ScafM SNP 0039.scaffold00152 736438 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 736468 1 A T scaffold6087 Both INDEL 0039.scaffold00152 736470 1 T . scaffold6087 Both SNP 0039.scaffold00152 736625 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 736817 1 A G scaffold6087 Both SNP 0039.scaffold00152 736919 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 737158 1 . A scaffold6087 Both SNP 0039.scaffold00152 737476 1 A G scaffold6087 ScafM INDEL 0039.scaffold00152 737700 9 AAGAAGGTT ......... scaffold6087 ScafM SNP 0039.scaffold00152 737844 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 737859 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 737870 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 737889 1 C G scaffold6087 ScafM SNP 0039.scaffold00152 737922 1 G T scaffold6087 ScafM INDEL 0039.scaffold00152 737927 1 . G scaffold6087 ScafM INDEL 0039.scaffold00152 737930 1 . T scaffold6087 ScafM SNP 0039.scaffold00152 737939 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 738284 2 TT CG scaffold6087 Both SNP 0039.scaffold00152 738398 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 738479 1 C T - ReadM SNP 0039.scaffold00152 738550 1 T C - ScafM SNP 0039.scaffold00152 738767 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 738770 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 738792 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 738836 1 A C scaffold6087 ScafM INDEL 0039.scaffold00152 738843 1 . T scaffold6087 ScafM SNP 0039.scaffold00152 738866 1 C T scaffold6087 ScafM INDEL 0039.scaffold00152 738885 2 .. TC scaffold6087 ScafM SNP 0039.scaffold00152 738924 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 738959 27 ........................... CTTCTCAGTTCGCCTCTCTCTCTCTCT scaffold6087 Both SNP 0039.scaffold00152 738996 1 T C scaffold6087 Both SNP 0039.scaffold00152 739090 1 G A scaffold6087 Both SNP 0039.scaffold00152 739102 1 T A scaffold6087 Both SNP 0039.scaffold00152 739169 1 T G scaffold6087 Both SNP 0039.scaffold00152 739188 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 739287 1 C T - ReadM SNP 0039.scaffold00152 739324 1 C T - ReadM SNP 0039.scaffold00152 739362 1 G A - ReadM SNP 0039.scaffold00152 739525 1 T C - ReadM SNP 0039.scaffold00152 739583 1 C T - ReadM SNP 0039.scaffold00152 739606 1 C T - ScafM SNP 0039.scaffold00152 739671 1 T C scaffold6087 Both SNP 0039.scaffold00152 739705 1 A G scaffold6087 Both SNP 0039.scaffold00152 739737 1 T C scaffold6087 Both SNP 0039.scaffold00152 739742 1 C T scaffold6087 Both SNP 0039.scaffold00152 739843 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 739932 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 739948 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 739986 1 G A - ReadM SNP 0039.scaffold00152 740051 1 G A - ReadM SNP 0039.scaffold00152 740068 1 A T - ReadM INDEL 0039.scaffold00152 740169 2 .. TA - ReadM SNP 0039.scaffold00152 740316 1 G A - ReadM SNP 0039.scaffold00152 740521 1 A T - ReadM SNP 0039.scaffold00152 740539 1 C T - ScafM SNP 0039.scaffold00152 740594 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 740605 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 740612 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 741595 1 A G scaffold6087 ReadM SNP 0039.scaffold00152 742076 1 A G - ReadM SNP 0039.scaffold00152 742234 1 C T - ReadM SNP 0039.scaffold00152 742245 1 C T - ScafM SNP 0039.scaffold00152 742811 1 G C scaffold5566 ScafM SNP 0039.scaffold00152 742864 1 A T scaffold5566 ScafM SNP 0039.scaffold00152 742892 1 C G scaffold5566 ScafM SNP 0039.scaffold00152 743270 1 A G scaffold2527 ScafM SNP 0039.scaffold00152 743291 1 A G scaffold2527 ScafM INDEL 0039.scaffold00152 743292 1 . A scaffold2527 ScafM SNP 0039.scaffold00152 743304 1 C A scaffold2527 ScafM SNP 0039.scaffold00152 743314 1 C T scaffold2527 ScafM INDEL 0039.scaffold00152 743331 1 A . scaffold2527 ScafM SNP 0039.scaffold00152 743354 1 G A scaffold2527 ScafM SNP 0039.scaffold00152 743360 1 T A scaffold2527 ReadM SNP 0039.scaffold00152 744401 1 A G - ReadM SNP 0039.scaffold00152 744526 1 T A - ReadM SNP 0039.scaffold00152 744605 1 T C - ReadM SNP 0039.scaffold00152 744850 1 C T - ReadM SNP 0039.scaffold00152 744976 1 C A - ReadM SNP 0039.scaffold00152 744981 1 A G - Both SNP 0039.scaffold00152 745030 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 745072 1 A G - ReadM SNP 0039.scaffold00152 745141 1 A C - ReadM SNP 0039.scaffold00152 745242 1 G T - ReadM SNP 0039.scaffold00152 745338 1 C T - ReadM INDEL 0039.scaffold00152 745444 1 C . - ReadM INDEL 0039.scaffold00152 745532 1 T . - ReadM SNP 0039.scaffold00152 745624 1 G A - Both SNP 0039.scaffold00152 745726 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 745846 1 C A - ReadM SNP 0039.scaffold00152 745915 1 A C - ReadM SNP 0039.scaffold00152 746062 1 A T - ReadM SNP 0039.scaffold00152 746105 1 G A - ReadM SNP 0039.scaffold00152 746183 2 GG TC - ReadM SNP 0039.scaffold00152 746206 1 A T - ReadM SNP 0039.scaffold00152 746251 1 A G - ReadM INDEL 0039.scaffold00152 746426 1 . A - ReadM SNP 0039.scaffold00152 746668 1 G T - ReadM SNP 0039.scaffold00152 746774 1 G A - ReadM SNP 0039.scaffold00152 746794 1 T C - ReadM SNP 0039.scaffold00152 746865 1 T C - ReadM INDEL 0039.scaffold00152 746896 1 . A - ReadM SNP 0039.scaffold00152 746983 1 C T - ReadM SNP 0039.scaffold00152 747153 1 G A - ReadM SNP 0039.scaffold00152 747374 1 A C - ReadM SNP 0039.scaffold00152 747537 1 T A - ReadM SNP 0039.scaffold00152 747555 1 A G - ReadM SNP 0039.scaffold00152 747660 1 A T - ReadM SNP 0039.scaffold00152 747686 1 T C - ReadM SNP 0039.scaffold00152 747805 1 T A - ReadM SNP 0039.scaffold00152 748138 1 C T - ReadM SNP 0039.scaffold00152 748143 1 C T - ReadM SNP 0039.scaffold00152 748203 1 A C - ReadM SNP 0039.scaffold00152 748250 1 A T - ReadM INDEL 0039.scaffold00152 748342 3 GAA ... - ReadM SNP 0039.scaffold00152 748399 1 T A - ReadM SNP 0039.scaffold00152 748434 1 T C - ReadM SNP 0039.scaffold00152 748553 1 T A - ReadM SNP 0039.scaffold00152 748624 1 G C - ReadM SNP 0039.scaffold00152 748633 1 T C - ReadM SNP 0039.scaffold00152 748733 2 TT CC - Both SNP 0039.scaffold00152 748798 1 G A scaffold6087 Both SNP 0039.scaffold00152 748825 1 C T scaffold6087 Both SNP 0039.scaffold00152 748855 1 T C scaffold6087 Both SNP 0039.scaffold00152 748928 1 G T scaffold6087 Both SNP 0039.scaffold00152 748986 1 G A scaffold6087 Both SNP 0039.scaffold00152 749190 1 G A scaffold6087 ReadM SNP 0039.scaffold00152 749240 1 C G - ReadM SNP 0039.scaffold00152 749302 1 G T - ReadM SNP 0039.scaffold00152 749327 1 A C - ReadM SNP 0039.scaffold00152 749378 1 C T - ReadM SNP 0039.scaffold00152 749413 1 C A - ReadM SNP 0039.scaffold00152 749547 1 A G - ReadM SNP 0039.scaffold00152 749619 1 G C - ReadM SNP 0039.scaffold00152 749720 1 C A - ReadM SNP 0039.scaffold00152 749733 1 T G - ReadM SNP 0039.scaffold00152 749752 1 G T - Both SNP 0039.scaffold00152 749899 1 T G scaffold6087 Both SNP 0039.scaffold00152 749983 1 A G scaffold6087 Both SNP 0039.scaffold00152 749987 1 T C scaffold6087 Both SNP 0039.scaffold00152 750020 1 A G scaffold6087 Both INDEL 0039.scaffold00152 750061 1 T . scaffold6087 Both SNP 0039.scaffold00152 750084 1 G T scaffold6087 ReadM SNP 0039.scaffold00152 750186 1 G A - ReadM SNP 0039.scaffold00152 750294 1 A G - ReadM SNP 0039.scaffold00152 750312 1 C A - Both SNP 0039.scaffold00152 750337 1 C T scaffold6087 Both SNP 0039.scaffold00152 750363 1 G A scaffold6087 Both SNP 0039.scaffold00152 750696 1 A G scaffold6087 Both SNP 0039.scaffold00152 750735 1 G A scaffold6087 Both INDEL 0039.scaffold00152 750752 1 T . scaffold6087 Both SNP 0039.scaffold00152 750772 1 C A scaffold6087 Both SNP 0039.scaffold00152 750941 1 C T scaffold6087 Both SNP 0039.scaffold00152 750958 1 T A scaffold6087 Both SNP 0039.scaffold00152 750966 1 A G scaffold6087 Both SNP 0039.scaffold00152 751040 1 G A scaffold6087 Both SNP 0039.scaffold00152 751132 1 C G scaffold6087 Both SNP 0039.scaffold00152 751201 1 T C scaffold6087 Both SNP 0039.scaffold00152 751226 1 A G scaffold6087 Both SNP 0039.scaffold00152 751305 1 C A scaffold6087 Both SNP 0039.scaffold00152 751442 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 751545 1 T A scaffold6087 ScafM INDEL 0039.scaffold00152 751546 5 ..... TTTAA scaffold6087 Both SNP 0039.scaffold00152 751646 1 A G scaffold6087 Both SNP 0039.scaffold00152 751721 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 751889 1 T C - ReadM SNP 0039.scaffold00152 752104 1 C T - ReadM SNP 0039.scaffold00152 752107 1 T G - ReadM INDEL 0039.scaffold00152 752186 1 . C - ReadM SNP 0039.scaffold00152 752216 1 G A - ReadM SNP 0039.scaffold00152 752365 1 A G - ReadM SNP 0039.scaffold00152 752459 1 A C - Both SNP 0039.scaffold00152 752567 1 G A scaffold6087 Both SNP 0039.scaffold00152 752593 1 G A scaffold6087 Both SNP 0039.scaffold00152 752759 1 A G scaffold6087 Both SNP 0039.scaffold00152 752808 1 G A scaffold6087 Both SNP 0039.scaffold00152 752876 1 T C scaffold6087 Both SNP 0039.scaffold00152 752900 1 G A scaffold6087 Both INDEL 0039.scaffold00152 752955 1 C . scaffold6087 Both SNP 0039.scaffold00152 752965 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 753055 1 C T - ReadM SNP 0039.scaffold00152 753105 1 C T - ReadM SNP 0039.scaffold00152 753182 1 T C - ReadM SNP 0039.scaffold00152 753203 1 G A - ReadM SNP 0039.scaffold00152 753321 1 C T - ReadM INDEL 0039.scaffold00152 753665 2 CA .. - ReadM SNP 0039.scaffold00152 753688 1 G C - Both SNP 0039.scaffold00152 753880 1 C G scaffold6087 Both SNP 0039.scaffold00152 753938 2 AA GG scaffold6087 ScafM SNP 0039.scaffold00152 754512 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 754605 18 TAGCAAAGTGGCATGTTT .................. scaffold6087 ScafM INDEL 0039.scaffold00152 754689 1 . T scaffold6087 ScafM SNP 0039.scaffold00152 755425 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 755440 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 755670 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 755701 1 C A scaffold6087 ScafM INDEL 0039.scaffold00152 756024 1 T . scaffold6087 ScafM INDEL 0039.scaffold00152 756221 2 AT .. scaffold6087 ScafM SNP 0039.scaffold00152 756701 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 756816 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 756819 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 756830 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 757121 1 T A - ReadM SNP 0039.scaffold00152 757125 1 G A - ReadM INDEL 0039.scaffold00152 757210 1 . A - ReadM SNP 0039.scaffold00152 757226 1 C T - ReadM SNP 0039.scaffold00152 757293 1 A T - Both INDEL 0039.scaffold00152 757395 1 . C scaffold6087 ReadM SNP 0039.scaffold00152 757511 1 G T - ReadM INDEL 0039.scaffold00152 757535 1 A . - ReadM SNP 0039.scaffold00152 757671 1 C T - ReadM INDEL 0039.scaffold00152 757730 1 . T - ReadM SNP 0039.scaffold00152 757770 1 A G - ReadM SNP 0039.scaffold00152 757828 1 G A - ReadM SNP 0039.scaffold00152 757833 1 T C - ReadM SNP 0039.scaffold00152 757841 1 A G - ReadM SNP 0039.scaffold00152 757908 1 T C - Both SNP 0039.scaffold00152 758045 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 758149 2 TC CA scaffold6087 ScafM INDEL 0039.scaffold00152 758376 1 . A scaffold6087 Both SNP 0039.scaffold00152 758448 1 T C scaffold6087 ReadM SNP 0039.scaffold00152 758525 1 C G - ReadM SNP 0039.scaffold00152 758588 1 T C - ScafM SNP 0039.scaffold00152 758777 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 758916 2 TC GT scaffold6087 Both SNP 0039.scaffold00152 758948 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 758953 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 758957 1 A C scaffold6087 Both SNP 0039.scaffold00152 759046 1 T C scaffold6087 Both SNP 0039.scaffold00152 759071 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 759119 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 759247 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 759363 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 759444 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 759500 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 759539 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 759961 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 759967 1 T A scaffold6087 ScafM INDEL 0039.scaffold00152 760025 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 760156 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 760174 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 760202 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 760214 1 T A scaffold6087 ScafM SNP 0039.scaffold00152 760489 2 TA CT scaffold6087 ReadM SNP 0039.scaffold00152 760730 1 A G - ReadM SNP 0039.scaffold00152 760824 1 A T - ReadM SNP 0039.scaffold00152 760931 1 T A - ReadM SNP 0039.scaffold00152 760991 1 A G - ReadM SNP 0039.scaffold00152 761242 1 T G - ReadM INDEL 0039.scaffold00152 761254 1 . A - ReadM SNP 0039.scaffold00152 761367 1 C T - ReadM INDEL 0039.scaffold00152 761382 1 . T - Both SNP 0039.scaffold00152 761560 1 A G scaffold6087 Both SNP 0039.scaffold00152 761599 1 C T scaffold6087 Both SNP 0039.scaffold00152 761739 1 G A scaffold6087 Both SNP 0039.scaffold00152 761830 1 C T scaffold6087 Both SNP 0039.scaffold00152 761894 1 T C scaffold6087 Both SNP 0039.scaffold00152 762014 1 T A scaffold6087 Both SNP 0039.scaffold00152 762047 1 G A scaffold6087 Both SNP 0039.scaffold00152 762265 1 A G scaffold6087 Both SNP 0039.scaffold00152 762279 1 C T scaffold6087 Both SNP 0039.scaffold00152 762287 1 T C scaffold6087 Both SNP 0039.scaffold00152 762371 1 T A scaffold6087 Both SNP 0039.scaffold00152 762431 1 A C scaffold6087 Both SNP 0039.scaffold00152 762474 1 T A scaffold6087 Both SNP 0039.scaffold00152 762486 1 G A scaffold6087 Both SNP 0039.scaffold00152 762600 1 G A scaffold6087 Both SNP 0039.scaffold00152 762703 1 C T scaffold6087 ReadM SNP 0039.scaffold00152 762808 1 C T - ScafM SNP 0039.scaffold00152 763469 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 763474 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 763482 2 .. CT scaffold6087 ScafM SNP 0039.scaffold00152 763485 1 A C scaffold6087 ScafM SNP 0039.scaffold00152 763511 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 763573 2 TT CC scaffold6087 ScafM SNP 0039.scaffold00152 763589 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 763674 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 763748 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 763760 1 C A scaffold6087 ScafM SNP 0039.scaffold00152 763805 1 G T scaffold6087 ScafM INDEL 0039.scaffold00152 763811 1 . T scaffold6087 ScafM SNP 0039.scaffold00152 763818 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 763837 1 G C scaffold6087 ScafM SNP 0039.scaffold00152 763839 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 763849 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 764231 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 764252 1 A G scaffold6087 ScafM INDEL 0039.scaffold00152 764301 2 AA .. scaffold6087 Both SNP 0039.scaffold00152 764499 1 G A scaffold6087 Both SNP 0039.scaffold00152 764510 1 T C scaffold6087 Both SNP 0039.scaffold00152 764579 1 A G scaffold6087 Both SNP 0039.scaffold00152 764654 1 C G scaffold6087 Both SNP 0039.scaffold00152 764708 1 G A scaffold6087 Both SNP 0039.scaffold00152 764755 1 G A scaffold6087 ReadM SNP 0039.scaffold00152 764952 1 T C - ReadM SNP 0039.scaffold00152 765138 1 T A - Both SNP 0039.scaffold00152 765192 1 G T scaffold6087 Both SNP 0039.scaffold00152 765200 1 C T scaffold6087 Both SNP 0039.scaffold00152 765209 1 T C scaffold6087 Both SNP 0039.scaffold00152 765411 1 C T scaffold6087 Both SNP 0039.scaffold00152 765446 1 T C scaffold6087 Both SNP 0039.scaffold00152 765567 1 T C scaffold6087 Both SNP 0039.scaffold00152 765578 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 766513 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 766573 1 G C scaffold6087 ScafM SNP 0039.scaffold00152 766584 1 C T scaffold6087 ScafM INDEL 0039.scaffold00152 766596 7 ATCCTTT ....... scaffold6087 Both INDEL 0039.scaffold00152 766706 1 . A scaffold6087 ScafM INDEL 0039.scaffold00152 766838 23 ....................... TGTTAGATTTAGTTCGTTACTTT scaffold6087 Both INDEL 0039.scaffold00152 766893 1 . T scaffold6087 ReadM INDEL 0039.scaffold00152 767236 2 TA .. - ReadM SNP 0039.scaffold00152 767340 1 G T - ReadM SNP 0039.scaffold00152 767382 1 A G - Both SNP 0039.scaffold00152 767527 1 T A scaffold6087 Both SNP 0039.scaffold00152 767530 1 A G scaffold6087 Both SNP 0039.scaffold00152 767622 1 T C scaffold6087 Both SNP 0039.scaffold00152 767747 1 C G scaffold6087 ReadM SNP 0039.scaffold00152 767773 1 A G - ReadM SNP 0039.scaffold00152 767838 1 G T - ReadM SNP 0039.scaffold00152 767900 1 G A - ReadM SNP 0039.scaffold00152 767932 1 A G - ReadM SNP 0039.scaffold00152 768084 1 T A - ReadM SNP 0039.scaffold00152 768146 1 T G - ReadM SNP 0039.scaffold00152 768220 1 A T - ReadM SNP 0039.scaffold00152 768394 1 G A - ReadM SNP 0039.scaffold00152 768665 1 T A - ReadM SNP 0039.scaffold00152 768698 1 G A - ScafM SNP 0039.scaffold00152 769603 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 769624 1 T C scaffold6087 ScafM SNP 0039.scaffold00152 769629 1 G T scaffold6087 ScafM SNP 0039.scaffold00152 769653 1 T A scaffold6087 ScafM INDEL 0039.scaffold00152 769685 2 AG .. scaffold6087 ScafM INDEL 0039.scaffold00152 769854 2 .. AA scaffold6087 ScafM INDEL 0039.scaffold00152 769965 15 ............... AGTCCAAATGGCTGG scaffold6087 Both INDEL 0039.scaffold00152 770059 1 A . scaffold6087 Both SNP 0039.scaffold00152 770070 1 T A scaffold6087 Both SNP 0039.scaffold00152 770107 1 G A scaffold6087 Both SNP 0039.scaffold00152 770491 1 T G scaffold6087 Both SNP 0039.scaffold00152 770611 1 A G scaffold6087 Both SNP 0039.scaffold00152 770638 1 A G scaffold6087 Both SNP 0039.scaffold00152 771011 1 A G scaffold6087 Both SNP 0039.scaffold00152 771648 1 A G scaffold6087 Both INDEL 0039.scaffold00152 772242 2 AA .. scaffold6087 Both SNP 0039.scaffold00152 772337 1 G A scaffold6087 Both SNP 0039.scaffold00152 772600 1 A G scaffold6087 Both SNP 0039.scaffold00152 772613 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 772747 1 G A scaffold6087 ScafM SNP 0039.scaffold00152 772964 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 772966 1 A C scaffold6087 ScafM INDEL 0039.scaffold00152 773027 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 773577 1 A G scaffold6087 ScafM SNP 0039.scaffold00152 773719 1 A G scaffold6087 Both SNP 0039.scaffold00152 773842 1 A G scaffold6087 Both SNP 0039.scaffold00152 774043 1 T C scaffold6087 ScafM INDEL 0039.scaffold00152 774097 16 ................ TCAACTAAAAATTAGA scaffold6087 ScafM SNP 0039.scaffold00152 774130 1 C T scaffold6087 ScafM SNP 0039.scaffold00152 774135 1 T C scaffold6087 Both SNP 0039.scaffold00152 774155 1 T C scaffold6087 Both SNP 0039.scaffold00152 774360 1 C T scaffold6087 Both SNP 0039.scaffold00152 774685 1 G A scaffold6087 ScafM INDEL 0039.scaffold00152 774831 1 . A scaffold6087 ScafM SNP 0039.scaffold00152 775444 1 C T scaffold6087 Both SNP 0039.scaffold00152 775459 1 A G scaffold6087 Both SNP 0039.scaffold00152 775507 1 A G scaffold6087 Both SNP 0039.scaffold00152 775559 1 A C scaffold6087 Both INDEL 0039.scaffold00152 775579 1 . A scaffold6087 ScafM INDEL 0039.scaffold00152 775602 1 . C scaffold6087 ScafM SNP 0039.scaffold00152 775610 1 T G scaffold6087 ScafM SNP 0039.scaffold00152 775617 2 GG AA scaffold6087 Both INDEL 0039.scaffold00152 775773 1 T . scaffold6087 ReadM SNP 0039.scaffold00152 775950 1 T G - ReadM SNP 0039.scaffold00152 775970 1 A G - ReadM SNP 0039.scaffold00152 776316 1 A G - ReadM SNP 0039.scaffold00152 776378 1 C A - ReadM SNP 0039.scaffold00152 776396 1 G A - ReadM SNP 0039.scaffold00152 776536 1 C T - ReadM SNP 0039.scaffold00152 776999 1 A G - ReadM INDEL 0039.scaffold00152 777093 1 A . - Both SNP 0039.scaffold00152 777311 1 A T scaffold6087 Both INDEL 0039.scaffold00152 777426 1 T . scaffold6087 ScafM SNP 0039.scaffold00152 791747 1 G A scaffold15940 Both SNP 0039.scaffold00152 792916 1 T C scaffold15940 ReadM INDEL 0039.scaffold00152 793050 1 . A - ReadM SNP 0039.scaffold00152 793402 1 A G - Both SNP 0039.scaffold00152 793660 1 G T scaffold15940 ReadM SNP 0039.scaffold00152 794023 1 T C - ScafM SNP 0039.scaffold00152 794845 1 C T scaffold15940 ScafM INDEL 0039.scaffold00152 794873 2 TG .. scaffold15940 ScafM INDEL 0039.scaffold00152 794878 3 TTG ... scaffold15940 ScafM SNP 0039.scaffold00152 794884 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 794890 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 795290 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 795298 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 795436 1 G A scaffold15940 ReadM SNP 0039.scaffold00152 797479 1 A G - ReadM SNP 0039.scaffold00152 797562 1 A G - ReadM SNP 0039.scaffold00152 797693 1 G C - ReadM SNP 0039.scaffold00152 797983 1 C T - ReadM SNP 0039.scaffold00152 798181 1 T C - ScafM SNP 0039.scaffold00152 798478 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 798714 1 C T scaffold15940 ReadM SNP 0039.scaffold00152 800584 1 A G - ReadM SNP 0039.scaffold00152 800642 1 G T - ReadM INDEL 0039.scaffold00152 800701 1 . C - ScafM SNP 0039.scaffold00152 800824 1 T A scaffold15940 Both SNP 0039.scaffold00152 801080 1 C T scaffold15940 Both SNP 0039.scaffold00152 801110 1 A G scaffold15940 Both SNP 0039.scaffold00152 801125 1 T C scaffold15940 Both SNP 0039.scaffold00152 801257 1 C T scaffold15940 Both SNP 0039.scaffold00152 801297 1 T C scaffold15940 Both SNP 0039.scaffold00152 801307 1 A T scaffold15940 Both SNP 0039.scaffold00152 801347 1 A T scaffold15940 ScafM SNP 0039.scaffold00152 801403 2 GG AA scaffold15940 ScafM SNP 0039.scaffold00152 801410 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 801421 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 801423 1 G C scaffold15940 ScafM SNP 0039.scaffold00152 801430 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 801439 1 C T scaffold15940 ScafM INDEL 0039.scaffold00152 801446 1 . C scaffold15940 ScafM INDEL 0039.scaffold00152 801449 1 A . scaffold15940 ScafM SNP 0039.scaffold00152 801476 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 801487 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 801495 1 G C scaffold15940 ScafM SNP 0039.scaffold00152 801529 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 801531 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 801533 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 801546 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 801571 2 AA GG scaffold15940 Both SNP 0039.scaffold00152 801606 1 G C scaffold15940 Both SNP 0039.scaffold00152 801705 1 G A scaffold15940 Both SNP 0039.scaffold00152 801783 1 A T scaffold15940 Both SNP 0039.scaffold00152 801857 1 G C scaffold15940 Both SNP 0039.scaffold00152 801867 1 G A scaffold15940 Both SNP 0039.scaffold00152 801976 1 T G scaffold15940 Both SNP 0039.scaffold00152 802021 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 802064 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 802067 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 802071 1 C T scaffold15940 Both SNP 0039.scaffold00152 802193 1 C G scaffold15940 Both SNP 0039.scaffold00152 802225 1 A G scaffold15940 Both SNP 0039.scaffold00152 802270 1 C T scaffold15940 Both SNP 0039.scaffold00152 802350 1 T C scaffold15940 Both SNP 0039.scaffold00152 802371 1 G A scaffold15940 Both SNP 0039.scaffold00152 802535 1 C T scaffold15940 Both SNP 0039.scaffold00152 802646 1 G T scaffold15940 Both SNP 0039.scaffold00152 802650 1 A C scaffold15940 ScafM INDEL 0039.scaffold00152 802659 7 ....... AAAAAAG scaffold15940 Both SNP 0039.scaffold00152 802715 1 G A scaffold15940 Both SNP 0039.scaffold00152 802732 1 G A scaffold15940 Both SNP 0039.scaffold00152 802775 1 T C scaffold15940 Both SNP 0039.scaffold00152 802796 1 T A scaffold15940 Both SNP 0039.scaffold00152 802802 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 802870 1 G A scaffold15940 ScafM INDEL 0039.scaffold00152 802882 5 TTTCA ....G scaffold15940 Both SNP 0039.scaffold00152 802986 1 A C scaffold15940 Both SNP 0039.scaffold00152 803003 1 T C scaffold15940 Both SNP 0039.scaffold00152 803104 1 A T scaffold15940 Both SNP 0039.scaffold00152 803114 1 A T scaffold15940 ScafM INDEL 0039.scaffold00152 803141 1 A . scaffold15940 ScafM SNP 0039.scaffold00152 803143 2 AT GC scaffold15940 Both SNP 0039.scaffold00152 803163 1 C A scaffold15940 Both SNP 0039.scaffold00152 803220 1 A G scaffold15940 Both SNP 0039.scaffold00152 803443 1 G A scaffold15940 Both SNP 0039.scaffold00152 803531 1 C T scaffold15940 Both INDEL 0039.scaffold00152 803683 2 TT .. scaffold15940 Both SNP 0039.scaffold00152 803703 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 803733 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 803749 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 803776 1 T C scaffold15940 ScafM INDEL 0039.scaffold00152 803789 2 .. AA scaffold15940 ScafM INDEL 0039.scaffold00152 803792 3 ... TCT scaffold15940 ScafM SNP 0039.scaffold00152 803812 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 803825 2 GA TT scaffold15940 Both SNP 0039.scaffold00152 804042 1 A T scaffold15940 Both SNP 0039.scaffold00152 804060 1 T G scaffold15940 Both SNP 0039.scaffold00152 804079 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 804121 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 804128 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804171 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 804181 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804187 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 804201 1 T G scaffold15940 ScafM SNP 0039.scaffold00152 804206 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 804208 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 804210 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 804227 1 T C scaffold15940 ScafM INDEL 0039.scaffold00152 804236 7 ....... TAGCTAT scaffold15940 ScafM INDEL 0039.scaffold00152 804248 1 G . scaffold15940 ScafM SNP 0039.scaffold00152 804255 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 804263 1 C T scaffold15940 ScafM INDEL 0039.scaffold00152 804284 1 T . scaffold15940 ScafM SNP 0039.scaffold00152 804286 2 TT CC scaffold15940 ScafM SNP 0039.scaffold00152 804295 1 T G scaffold15940 ScafM SNP 0039.scaffold00152 804320 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 804376 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804386 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804390 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 804392 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804415 2 GA AG scaffold15940 ScafM SNP 0039.scaffold00152 804431 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804447 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804453 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804478 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804496 2 GA AC scaffold15940 ScafM SNP 0039.scaffold00152 804514 2 AC TT scaffold15940 ScafM SNP 0039.scaffold00152 804529 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 804533 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 804536 1 C A scaffold15940 ScafM SNP 0039.scaffold00152 804540 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 804562 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 804571 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 804590 1 A G scaffold15940 ScafM INDEL 0039.scaffold00152 804616 1 . T scaffold15940 ScafM SNP 0039.scaffold00152 804618 1 A T scaffold15940 ScafM SNP 0039.scaffold00152 804634 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804645 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 804686 1 A C scaffold15940 ScafM INDEL 0039.scaffold00152 804710 1 . T scaffold15940 ScafM SNP 0039.scaffold00152 804761 1 G C scaffold15940 ScafM SNP 0039.scaffold00152 804765 1 A G scaffold15940 ScafM INDEL 0039.scaffold00152 804809 1 . T scaffold15940 ScafM SNP 0039.scaffold00152 804869 1 A G scaffold15940 Both SNP 0039.scaffold00152 804911 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 804999 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805009 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805021 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805102 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 805117 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805143 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805177 1 A T scaffold15940 ScafM SNP 0039.scaffold00152 805197 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805212 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805214 1 A T scaffold15940 ScafM SNP 0039.scaffold00152 805251 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805254 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805258 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 805260 1 T G scaffold15940 ScafM SNP 0039.scaffold00152 805281 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805289 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805313 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 805331 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805351 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805357 1 G C scaffold15940 ScafM SNP 0039.scaffold00152 805371 1 G A scaffold15940 ScafM INDEL 0039.scaffold00152 805374 1 T . scaffold15940 ScafM SNP 0039.scaffold00152 805383 1 C T scaffold15940 ScafM INDEL 0039.scaffold00152 805391 3 GAC ..T scaffold15940 ScafM SNP 0039.scaffold00152 805434 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 805436 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 805443 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805482 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 805505 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 805517 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 805550 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 805561 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805574 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805592 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805623 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 805634 2 CG TA scaffold15940 ScafM INDEL 0039.scaffold00152 805655 1 . A scaffold15940 ScafM SNP 0039.scaffold00152 805658 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805675 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 805698 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805704 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 805707 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 805741 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 805760 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 805763 1 G A scaffold15940 ScafM INDEL 0039.scaffold00152 805767 2 .T GA scaffold15940 ScafM SNP 0039.scaffold00152 805809 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 805843 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 805893 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 805909 1 T C scaffold15940 ScafM INDEL 0039.scaffold00152 805919 20 TTGACAACAAATTAGTATTA .................... scaffold15940 ScafM INDEL 0039.scaffold00152 805941 1 T . scaffold15940 ScafM SNP 0039.scaffold00152 805962 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 805974 1 G T scaffold15940 ScafM SNP 0039.scaffold00152 805985 1 G A scaffold15940 ScafM INDEL 0039.scaffold00152 805987 1 . T scaffold15940 ScafM SNP 0039.scaffold00152 806000 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 806058 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 806074 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 806105 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 806112 1 A G scaffold15940 ScafM SNP 0039.scaffold00152 806158 1 A T scaffold15940 Both SNP 0039.scaffold00152 806236 1 C T scaffold15940 Both SNP 0039.scaffold00152 806279 1 A G scaffold15940 Both SNP 0039.scaffold00152 806344 1 A T scaffold15940 Both SNP 0039.scaffold00152 806354 1 T C scaffold15940 ReadM INDEL 0039.scaffold00152 806496 1 A . - Both INDEL 0039.scaffold00152 806497 1 T . scaffold15940 Both SNP 0039.scaffold00152 806521 1 T C scaffold15940 ScafM SNP 0039.scaffold00152 806617 2 AA GG scaffold15940 Both SNP 0039.scaffold00152 806622 1 T G scaffold15940 ScafM SNP 0039.scaffold00152 806781 2 TC GT scaffold15940 Both SNP 0039.scaffold00152 806897 1 A G scaffold15940 Both SNP 0039.scaffold00152 806946 1 A T scaffold15940 Both INDEL 0039.scaffold00152 807009 1 T . scaffold15940 ScafM SNP 0039.scaffold00152 807016 1 G A scaffold15940 Both SNP 0039.scaffold00152 807027 1 G T scaffold15940 Both SNP 0039.scaffold00152 807066 1 T C scaffold15940 Both SNP 0039.scaffold00152 807146 1 C T scaffold15940 Both SNP 0039.scaffold00152 807172 1 T A scaffold15940 ScafM INDEL 0039.scaffold00152 807209 5 ..... ATATT scaffold15940 Both SNP 0039.scaffold00152 807418 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 807786 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 807905 1 C G scaffold15940 ScafM SNP 0039.scaffold00152 808041 1 T A scaffold15940 ScafM SNP 0039.scaffold00152 808052 1 A C scaffold15940 ScafM SNP 0039.scaffold00152 808099 1 G A scaffold15940 ScafM SNP 0039.scaffold00152 808102 1 C T scaffold15940 ScafM SNP 0039.scaffold00152 808112 1 A T scaffold15940 ScafM SNP 0039.scaffold00152 808117 2 TT AA scaffold15940 ScafM SNP 0039.scaffold00152 808127 1 A T scaffold15940 ScafM INDEL 0039.scaffold00152 808497 1 T . scaffold12663 ScafM INDEL 0039.scaffold00152 808506 1 A . scaffold12663 ScafM SNP 0039.scaffold00152 808512 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 808519 2 CG TA scaffold12663 ScafM SNP 0039.scaffold00152 808662 1 A C scaffold12663 ScafM INDEL 0039.scaffold00152 808666 1 C . scaffold12663 ScafM INDEL 0039.scaffold00152 808669 2 .. CG scaffold12663 ScafM SNP 0039.scaffold00152 808670 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 808673 1 G T scaffold12663 ScafM INDEL 0039.scaffold00152 808692 1 . T scaffold12663 ScafM SNP 0039.scaffold00152 808694 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 808709 1 A C scaffold12663 ScafM SNP 0039.scaffold00152 808723 1 A C scaffold12663 ScafM SNP 0039.scaffold00152 808759 1 A G scaffold12663 ScafM INDEL 0039.scaffold00152 808783 4 TTAT .... scaffold12663 ScafM INDEL 0039.scaffold00152 808794 3 ATA ... scaffold12663 ScafM INDEL 0039.scaffold00152 808798 6 TATTTA ...... scaffold12663 ScafM SNP 0039.scaffold00152 808810 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 808824 1 G T scaffold12663 ScafM INDEL 0039.scaffold00152 808842 1 . G scaffold12663 ScafM SNP 0039.scaffold00152 808855 2 AG GC scaffold12663 ScafM INDEL 0039.scaffold00152 808878 8 ........ AATTTTAA scaffold12663 ScafM SNP 0039.scaffold00152 808879 1 G T scaffold12663 ScafM SNP 0039.scaffold00152 808902 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 808941 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 808972 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 809001 1 G C scaffold12663 ScafM SNP 0039.scaffold00152 809120 1 G T scaffold12663 ScafM SNP 0039.scaffold00152 809138 2 AA GG scaffold12663 ScafM SNP 0039.scaffold00152 809142 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 809145 2 GC TT scaffold12663 ScafM SNP 0039.scaffold00152 809159 2 GA AG scaffold12663 ScafM SNP 0039.scaffold00152 809167 1 G T scaffold12663 ScafM INDEL 0039.scaffold00152 809174 1 T . scaffold12663 ScafM SNP 0039.scaffold00152 809177 2 AA TG scaffold12663 ScafM SNP 0039.scaffold00152 809182 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 809187 2 GT AC scaffold12663 ScafM SNP 0039.scaffold00152 809193 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 809196 2 TC CT scaffold12663 ScafM SNP 0039.scaffold00152 809200 2 CT TC scaffold12663 ScafM SNP 0039.scaffold00152 809203 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 809210 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 809217 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 809219 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 809221 2 GC AA scaffold12663 ScafM INDEL 0039.scaffold00152 809225 1 . A scaffold12663 ScafM SNP 0039.scaffold00152 809234 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 809236 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 809239 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 809249 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 809254 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 809264 2 CT TC scaffold12663 ScafM SNP 0039.scaffold00152 809270 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 809283 1 A T scaffold12663 ScafM INDEL 0039.scaffold00152 809291 1 T . scaffold12663 ScafM SNP 0039.scaffold00152 809295 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 810285 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 810321 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 810327 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 810339 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 810347 1 . T scaffold12663 ScafM SNP 0039.scaffold00152 810379 2 TG CA scaffold12663 ScafM INDEL 0039.scaffold00152 810400 1 . T scaffold12663 ScafM INDEL 0039.scaffold00152 810402 2 .. TT scaffold12663 ScafM SNP 0039.scaffold00152 810408 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 810411 2 CA TG scaffold12663 ScafM INDEL 0039.scaffold00152 810443 1 T . scaffold12663 ScafM SNP 0039.scaffold00152 811687 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 811695 2 CA TG scaffold12663 ScafM SNP 0039.scaffold00152 811699 1 C A scaffold12663 ScafM SNP 0039.scaffold00152 811708 1 G C scaffold12663 ScafM SNP 0039.scaffold00152 811714 1 C T scaffold12663 ScafM INDEL 0039.scaffold00152 811720 2 .A GG scaffold12663 ScafM SNP 0039.scaffold00152 811725 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 811731 1 C A scaffold12663 ScafM SNP 0039.scaffold00152 811762 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 811766 1 A C scaffold12663 Both SNP 0039.scaffold00152 811791 1 C A scaffold12663 Both SNP 0039.scaffold00152 811851 1 G A scaffold12663 Both SNP 0039.scaffold00152 811875 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 811984 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 811992 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 812076 1 G C scaffold12663 Both SNP 0039.scaffold00152 812122 1 T C scaffold12663 Both SNP 0039.scaffold00152 812145 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 812306 1 A G scaffold12663 ScafM INDEL 0039.scaffold00152 812312 3 TTA ... scaffold12663 ScafM SNP 0039.scaffold00152 812319 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 812325 1 T C scaffold12663 Both SNP 0039.scaffold00152 812339 1 G A scaffold12663 Both SNP 0039.scaffold00152 812361 1 G A scaffold12663 Both SNP 0039.scaffold00152 812410 1 T A scaffold12663 Both INDEL 0039.scaffold00152 812466 2 GG .. scaffold12663 Both SNP 0039.scaffold00152 812502 1 C T scaffold12663 Both SNP 0039.scaffold00152 812533 1 T A scaffold12663 Both SNP 0039.scaffold00152 812612 1 G A scaffold12663 Both SNP 0039.scaffold00152 812644 1 A T scaffold12663 Both SNP 0039.scaffold00152 812711 1 A G scaffold12663 ScafM INDEL 0039.scaffold00152 812742 14 AACTATTTACTATT .............. scaffold12663 ScafM SNP 0039.scaffold00152 812775 1 A T scaffold12663 Both INDEL 0039.scaffold00152 812848 1 A . scaffold12663 ScafM SNP 0039.scaffold00152 812853 1 A G scaffold12663 Both SNP 0039.scaffold00152 812861 1 C T scaffold12663 Both SNP 0039.scaffold00152 812937 1 A G scaffold12663 Both SNP 0039.scaffold00152 812968 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 813009 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 813012 7 ....... GGATTCA scaffold12663 Both SNP 0039.scaffold00152 813047 1 T G scaffold12663 Both SNP 0039.scaffold00152 813053 1 A T scaffold12663 Both SNP 0039.scaffold00152 813059 1 C G scaffold12663 Both SNP 0039.scaffold00152 813167 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 813266 1 T C scaffold12663 Both SNP 0039.scaffold00152 813320 1 T C scaffold12663 Both SNP 0039.scaffold00152 813361 1 G A scaffold12663 ReadM SNP 0039.scaffold00152 813492 1 C T - ReadM SNP 0039.scaffold00152 813565 1 C T - ScafM SNP 0039.scaffold00152 813604 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 813625 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 813813 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 813850 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 813880 1 C A scaffold12663 ScafM SNP 0039.scaffold00152 813944 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 813986 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 814025 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 814032 4 TTTT AAAA scaffold12663 ScafM SNP 0039.scaffold00152 814079 1 G T scaffold12663 ScafM INDEL 0039.scaffold00152 814139 3 ... AAT scaffold12663 ScafM SNP 0039.scaffold00152 814222 2 TC AT scaffold16205 ScafM SNP 0039.scaffold00152 814229 2 TC CT scaffold16205 ScafM SNP 0039.scaffold00152 814261 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814277 1 G T scaffold16205 ScafM SNP 0039.scaffold00152 814289 2 GT AC scaffold16205 ScafM SNP 0039.scaffold00152 814294 1 A T scaffold16205 ScafM SNP 0039.scaffold00152 814311 2 GG AA scaffold16205 ScafM SNP 0039.scaffold00152 814340 1 T A scaffold16205 ScafM SNP 0039.scaffold00152 814342 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814348 1 T C scaffold16205 ScafM SNP 0039.scaffold00152 814351 1 A T scaffold16205 ScafM SNP 0039.scaffold00152 814354 1 T C scaffold16205 ScafM SNP 0039.scaffold00152 814365 1 T C scaffold16205 ScafM SNP 0039.scaffold00152 814382 1 C T scaffold16205 ScafM SNP 0039.scaffold00152 814413 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814429 1 T G scaffold16205 ScafM SNP 0039.scaffold00152 814436 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814441 1 C T scaffold16205 ScafM SNP 0039.scaffold00152 814492 1 G T scaffold16205 ScafM SNP 0039.scaffold00152 814494 1 G T scaffold16205 ScafM SNP 0039.scaffold00152 814500 2 AC GT scaffold16205 ScafM SNP 0039.scaffold00152 814508 1 T C scaffold16205 ScafM SNP 0039.scaffold00152 814526 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814538 1 G T scaffold16205 ScafM SNP 0039.scaffold00152 814543 1 A C scaffold16205 ScafM SNP 0039.scaffold00152 814564 1 G C scaffold16205 ScafM SNP 0039.scaffold00152 814572 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814578 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814592 1 T G scaffold16205 ScafM SNP 0039.scaffold00152 814594 1 G C scaffold16205 ScafM SNP 0039.scaffold00152 814607 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814609 1 G A scaffold16205 ScafM INDEL 0039.scaffold00152 814611 3 ... ATC scaffold16205 ScafM SNP 0039.scaffold00152 814624 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814626 1 A C scaffold16205 ScafM SNP 0039.scaffold00152 814634 1 T A scaffold16205 ScafM SNP 0039.scaffold00152 814649 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814651 1 G T scaffold16205 ScafM SNP 0039.scaffold00152 814676 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814685 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814687 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814710 3 GAG ACA scaffold16205 ScafM SNP 0039.scaffold00152 814732 1 C G scaffold16205 ScafM SNP 0039.scaffold00152 814749 1 G C scaffold16205 ScafM SNP 0039.scaffold00152 814751 1 A T scaffold16205 ScafM SNP 0039.scaffold00152 814760 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814765 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814805 1 T A scaffold16205 ScafM SNP 0039.scaffold00152 814817 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814819 1 T A scaffold16205 ScafM SNP 0039.scaffold00152 814827 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814846 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814850 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814860 1 G A scaffold16205 ScafM SNP 0039.scaffold00152 814872 1 C T scaffold16205 ScafM SNP 0039.scaffold00152 814888 1 T C scaffold16205 ScafM SNP 0039.scaffold00152 814893 1 A G scaffold16205 ScafM SNP 0039.scaffold00152 814913 1 T A scaffold16205 ScafM SNP 0039.scaffold00152 814933 2 GT AC scaffold16205 ScafM SNP 0039.scaffold00152 814952 1 G C C19673995 ScafM SNP 0039.scaffold00152 814998 2 CA TG C19673995 ScafM SNP 0039.scaffold00152 815045 1 G A C19673995 ScafM SNP 0039.scaffold00152 815060 3 CTG TCA C19673995 ScafM SNP 0039.scaffold00152 815075 1 A G C19673995 ScafM INDEL 0039.scaffold00152 815096 2 TG .. C19673995 ScafM SNP 0039.scaffold00152 815101 1 G A C19673995 ScafM SNP 0039.scaffold00152 815105 1 T C C19673995 ScafM SNP 0039.scaffold00152 815112 1 A C C19673995 ScafM SNP 0039.scaffold00152 815114 1 C T C19673995 ScafM SNP 0039.scaffold00152 815123 1 C G C19673995 ScafM SNP 0039.scaffold00152 815126 1 G T C19673995 ScafM SNP 0039.scaffold00152 815128 1 G C C19673995 ScafM SNP 0039.scaffold00152 815130 1 T G C19673995 ScafM INDEL 0039.scaffold00152 815175 1 . G C19673995 ScafM SNP 0039.scaffold00152 815185 1 G A C19673995 ScafM INDEL 0039.scaffold00152 815188 1 T . C19673995 ScafM SNP 0039.scaffold00152 815240 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815287 1 T A scaffold13008 ScafM SNP 0039.scaffold00152 815291 1 G A scaffold13008 ScafM SNP 0039.scaffold00152 815317 1 T G scaffold13008 ScafM SNP 0039.scaffold00152 815343 1 T G scaffold13008 ScafM INDEL 0039.scaffold00152 815352 2 .T CA scaffold13008 ScafM SNP 0039.scaffold00152 815363 1 A T scaffold13008 ScafM SNP 0039.scaffold00152 815394 1 A T scaffold13008 ScafM SNP 0039.scaffold00152 815404 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815411 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815413 1 G T scaffold13008 ScafM SNP 0039.scaffold00152 815423 1 C T scaffold13008 ScafM SNP 0039.scaffold00152 815486 1 T C scaffold13008 ScafM INDEL 0039.scaffold00152 815488 1 G . scaffold13008 ScafM SNP 0039.scaffold00152 815490 2 CT AG scaffold13008 ScafM INDEL 0039.scaffold00152 815498 2 TA .. scaffold13008 ScafM SNP 0039.scaffold00152 815502 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815517 1 A G scaffold13008 ScafM SNP 0039.scaffold00152 815537 1 G A scaffold13008 ScafM SNP 0039.scaffold00152 815562 1 G C scaffold13008 ScafM SNP 0039.scaffold00152 815584 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815634 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815654 1 T C scaffold13008 ScafM SNP 0039.scaffold00152 815658 1 C T scaffold13008 ScafM SNP 0039.scaffold00152 815663 1 G A scaffold13008 ScafM SNP 0039.scaffold00152 815678 1 C T scaffold13008 ScafM SNP 0039.scaffold00152 815680 1 T C scaffold13008 ScafM INDEL 0039.scaffold00152 815687 3 AGG ... scaffold13008 ScafM INDEL 0039.scaffold00152 815693 2 TT .. scaffold13008 ScafM INDEL 0039.scaffold00152 815696 1 T . scaffold13008 ScafM INDEL 0039.scaffold00152 815700 16 GGTTCCATTACCTTAG ................ scaffold13008 ScafM INDEL 0039.scaffold00152 815718 2 AT .. scaffold13008 ScafM INDEL 0039.scaffold00152 815722 1 G . scaffold13008 ScafM INDEL 0039.scaffold00152 815726 10 TTTAAGAGAC .......... scaffold13008 ScafM INDEL 0039.scaffold00152 815738 3 GAA ... scaffold13008 ScafM INDEL 0039.scaffold00152 815742 3 CCA ... scaffold13008 ScafM SNP 0039.scaffold00152 815780 1 A C scaffold13008 ScafM INDEL 0039.scaffold00152 815795 1 C . scaffold13008 ScafM SNP 0039.scaffold00152 815799 1 A G scaffold13008 ScafM SNP 0039.scaffold00152 815837 1 T A scaffold13008 ScafM INDEL 0039.scaffold00152 815840 1 . T scaffold13008 ScafM SNP 0039.scaffold00152 815857 1 T A scaffold13008 ScafM SNP 0039.scaffold00152 815891 1 A G scaffold13008 ScafM SNP 0039.scaffold00152 815910 1 C T scaffold13008 ScafM INDEL 0039.scaffold00152 817818 1 . T scaffold12663 ScafM SNP 0039.scaffold00152 817821 1 A C scaffold12663 ScafM SNP 0039.scaffold00152 817834 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 817844 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 817850 1 C A scaffold12663 ScafM SNP 0039.scaffold00152 817853 2 TC CT scaffold12663 ScafM SNP 0039.scaffold00152 817860 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 817869 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 817888 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 817896 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 817898 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 817902 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 817906 1 C T scaffold12663 ScafM INDEL 0039.scaffold00152 817937 3 CCA ... scaffold12663 ScafM SNP 0039.scaffold00152 817949 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 817993 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 818580 1 G C scaffold12663 ScafM INDEL 0039.scaffold00152 818602 1 . T scaffold12663 ScafM SNP 0039.scaffold00152 818643 1 C G scaffold12663 ScafM SNP 0039.scaffold00152 818670 1 T C scaffold12663 ScafM INDEL 0039.scaffold00152 818671 1 . C scaffold12663 ScafM SNP 0039.scaffold00152 818675 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 818806 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 818816 6 TCAGGC ...... scaffold12663 ScafM SNP 0039.scaffold00152 818836 2 CT GG scaffold12663 ScafM INDEL 0039.scaffold00152 818842 3 CTT ... scaffold12663 ScafM SNP 0039.scaffold00152 818871 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 818876 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 818917 1 A C scaffold12663 ScafM INDEL 0039.scaffold00152 818936 13 CCCTGATTCGGGC ............. scaffold12663 ScafM INDEL 0039.scaffold00152 818999 7 ACTCCAA ....... scaffold12663 ScafM SNP 0039.scaffold00152 819037 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 819039 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 819045 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 819058 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 819103 1 G . scaffold12663 ScafM INDEL 0039.scaffold00152 819105 2 TC .. scaffold12663 ScafM INDEL 0039.scaffold00152 819108 2 GG .. scaffold12663 ScafM INDEL 0039.scaffold00152 819113 3 AAT ... scaffold12663 ScafM SNP 0039.scaffold00152 819139 1 A G scaffold12663 ScafM INDEL 0039.scaffold00152 819147 1 A . scaffold12663 ScafM SNP 0039.scaffold00152 819607 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819623 1 T G scaffold12663 ScafM SNP 0039.scaffold00152 819645 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819662 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 819667 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 819676 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 819693 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 819712 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 819718 1 T G scaffold12663 ScafM SNP 0039.scaffold00152 819756 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819844 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819864 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819872 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 819875 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 819888 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819893 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 819909 1 C . scaffold12663 ScafM SNP 0039.scaffold00152 819931 1 A T scaffold12663 ScafM INDEL 0039.scaffold00152 819960 1 C . scaffold12663 ScafM SNP 0039.scaffold00152 819980 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 819982 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 819985 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 819988 1 A G scaffold12663 ScafM SNP 0039.scaffold00152 819996 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 820022 1 T G scaffold12663 ScafM SNP 0039.scaffold00152 820033 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 820053 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 820072 1 C T scaffold12663 ScafM INDEL 0039.scaffold00152 820143 1 A . scaffold12663 ScafM SNP 0039.scaffold00152 820154 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 820156 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 820187 1 . T scaffold12663 ScafM SNP 0039.scaffold00152 820189 1 A G scaffold12663 ScafM INDEL 0039.scaffold00152 820190 5 ..... GCCGG scaffold12663 ScafM SNP 0039.scaffold00152 820218 1 T C scaffold12663 ScafM SNP 0039.scaffold00152 820230 1 C T scaffold12663 Both SNP 0039.scaffold00152 820314 1 T A scaffold12663 Both SNP 0039.scaffold00152 820395 1 C T scaffold12663 Both SNP 0039.scaffold00152 820398 1 G A scaffold12663 ScafM INDEL 0039.scaffold00152 820417 4 TAAA .... scaffold12663 Both SNP 0039.scaffold00152 820434 1 C T scaffold12663 ScafM SNP 0039.scaffold00152 820549 1 G A scaffold12663 Both SNP 0039.scaffold00152 820620 1 A G scaffold12663 Both SNP 0039.scaffold00152 820752 1 G T scaffold12663 Both SNP 0039.scaffold00152 820755 1 G C scaffold12663 Both SNP 0039.scaffold00152 820872 1 G A scaffold12663 Both SNP 0039.scaffold00152 820891 1 G A scaffold12663 Both SNP 0039.scaffold00152 820968 1 C T scaffold12663 Both SNP 0039.scaffold00152 821026 1 T C scaffold12663 Both SNP 0039.scaffold00152 821034 1 A T scaffold12663 ScafM INDEL 0039.scaffold00152 821080 1 . G scaffold12663 Both SNP 0039.scaffold00152 821087 1 G A scaffold12663 Both INDEL 0039.scaffold00152 821185 1 C . scaffold12663 ScafM INDEL 0039.scaffold00152 821207 7 ....... TAAACGA scaffold12663 Both SNP 0039.scaffold00152 821298 1 T C scaffold12663 ReadM SNP 0039.scaffold00152 821340 1 T G - ReadM SNP 0039.scaffold00152 821383 1 T A - ReadM SNP 0039.scaffold00152 821408 1 G A - ScafM INDEL 0039.scaffold00152 821470 4 .... ATAA scaffold12663 ScafM SNP 0039.scaffold00152 821638 1 G A scaffold12663 ScafM SNP 0039.scaffold00152 821671 1 G C scaffold12663 ScafM SNP 0039.scaffold00152 821680 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 821745 1 A T scaffold12663 ScafM SNP 0039.scaffold00152 821920 1 T A scaffold12663 ScafM SNP 0039.scaffold00152 821987 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 822005 1 T A scaffold16831 ScafM INDEL 0039.scaffold00152 822008 1 A . scaffold16831 ScafM SNP 0039.scaffold00152 822129 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 822161 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 822214 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 822289 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 822639 21 ..................... AGCATCTCAAACTCGCACAAG scaffold16831 ScafM INDEL 0039.scaffold00152 822796 3 CTT .AA scaffold16831 ScafM SNP 0039.scaffold00152 822800 1 T A scaffold16831 Both SNP 0039.scaffold00152 822912 1 T G scaffold16831 Both SNP 0039.scaffold00152 822936 1 T C scaffold16831 Both SNP 0039.scaffold00152 823037 1 A G scaffold16831 Both SNP 0039.scaffold00152 823103 1 C T scaffold16831 Both SNP 0039.scaffold00152 823150 1 T A scaffold16831 Both INDEL 0039.scaffold00152 823163 2 CA .. scaffold16831 Both SNP 0039.scaffold00152 823212 1 T C scaffold16831 Both SNP 0039.scaffold00152 823267 1 A C scaffold16831 Both SNP 0039.scaffold00152 823274 1 T G scaffold16831 Both INDEL 0039.scaffold00152 823290 1 A . scaffold16831 Both SNP 0039.scaffold00152 823303 1 G C scaffold16831 Both SNP 0039.scaffold00152 823392 1 T A scaffold16831 Both SNP 0039.scaffold00152 823398 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 823469 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 823534 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823543 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 823545 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823558 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 823576 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823580 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823589 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823597 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 823622 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 823626 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823630 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 823636 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823652 1 G T scaffold16831 ScafM INDEL 0039.scaffold00152 823674 7 GTCAACG ....... scaffold16831 ScafM SNP 0039.scaffold00152 823703 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 823769 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 823778 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 823820 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 823829 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 823927 1 T G scaffold16831 ScafM INDEL 0039.scaffold00152 823948 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 823968 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 823971 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 823997 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 824007 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 824036 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 824046 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 824074 6 ...... CTGGAG scaffold16831 ScafM SNP 0039.scaffold00152 824078 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 824105 12 ............ ATGATTCATCAG scaffold16831 ScafM SNP 0039.scaffold00152 824115 1 A C scaffold16831 ScafM INDEL 0039.scaffold00152 824152 2 .. AG scaffold16831 ScafM SNP 0039.scaffold00152 824177 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 824199 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 824212 1 C . scaffold16831 ScafM SNP 0039.scaffold00152 824220 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 824238 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824300 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 824395 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 824448 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 824459 2 CA TC scaffold16831 ScafM INDEL 0039.scaffold00152 824471 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 824479 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824507 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 824558 1 C G scaffold16831 ScafM INDEL 0039.scaffold00152 824561 1 . C scaffold16831 ScafM SNP 0039.scaffold00152 824569 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 824584 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 824601 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 824603 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 824625 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 824627 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 824666 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824677 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824703 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 824735 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 824741 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824784 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 824786 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 824834 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 824843 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 824853 7 ....... ATAAATC scaffold16831 ScafM SNP 0039.scaffold00152 824903 1 C A scaffold16831 ScafM INDEL 0039.scaffold00152 824914 6 ...... TTTTTA scaffold16831 ScafM INDEL 0039.scaffold00152 824956 7 AGTTTCA ....... scaffold16831 Both SNP 0039.scaffold00152 824983 1 A G scaffold16831 Both SNP 0039.scaffold00152 825018 1 A C scaffold16831 Both SNP 0039.scaffold00152 825028 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 825247 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 825255 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 825275 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 825304 2 GA TC scaffold16831 ScafM SNP 0039.scaffold00152 825333 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 825349 1 A G scaffold16831 ScafM INDEL 0039.scaffold00152 825456 15 ............... AATGAGAATGAAGTC scaffold16831 Both SNP 0039.scaffold00152 825606 1 G C scaffold16831 Both SNP 0039.scaffold00152 825613 1 C T scaffold16831 ReadM SNP 0039.scaffold00152 825623 1 A G - ReadM SNP 0039.scaffold00152 825924 1 C T - ReadM SNP 0039.scaffold00152 826080 1 C T - ReadM SNP 0039.scaffold00152 826242 1 C T - ReadM SNP 0039.scaffold00152 826377 1 G A - ScafM INDEL 0039.scaffold00152 826422 2 .. TA scaffold16831 ScafM INDEL 0039.scaffold00152 826430 1 . G scaffold16831 Both SNP 0039.scaffold00152 826536 1 C T scaffold16831 Both INDEL 0039.scaffold00152 826555 2 AA .. scaffold16831 ScafM INDEL 0039.scaffold00152 826620 11 ATGGCCACTTA ........... scaffold16831 ScafM INDEL 0039.scaffold00152 826700 2 GC .. scaffold16831 ScafM INDEL 0039.scaffold00152 826703 1 A . scaffold16831 ScafM INDEL 0039.scaffold00152 826706 1 A . scaffold16831 ScafM SNP 0039.scaffold00152 826721 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 826834 8 ........ AGCCTACA scaffold16831 ScafM SNP 0039.scaffold00152 827233 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 827244 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 827250 1 G A scaffold16831 Both SNP 0039.scaffold00152 827255 1 C G scaffold16831 Both SNP 0039.scaffold00152 827422 1 A G scaffold16831 ScafM INDEL 0039.scaffold00152 827468 8 TTTTCGAT ........ scaffold16831 ScafM INDEL 0039.scaffold00152 827477 6 GGTTGA ...... scaffold16831 ScafM INDEL 0039.scaffold00152 827485 10 ATTCGGAGTT .......... scaffold16831 ScafM INDEL 0039.scaffold00152 827497 3 GCA ... scaffold16831 ScafM SNP 0039.scaffold00152 827539 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 827541 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 827548 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 827550 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 827565 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 827583 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 827585 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 827603 2 TC CT scaffold16831 ScafM SNP 0039.scaffold00152 827610 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 827623 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 827627 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 827632 1 T C scaffold16831 ReadM SNP 0039.scaffold00152 829402 1 T C - ReadM SNP 0039.scaffold00152 829430 1 C G - ReadM SNP 0039.scaffold00152 829456 1 T G - ReadM SNP 0039.scaffold00152 829783 1 G A - ReadM SNP 0039.scaffold00152 829841 1 A G - ReadM SNP 0039.scaffold00152 829857 1 A G - ReadM SNP 0039.scaffold00152 829865 1 A G - ReadM SNP 0039.scaffold00152 829941 1 A G - ReadM SNP 0039.scaffold00152 830093 1 C T - ReadM SNP 0039.scaffold00152 830116 1 G C - ReadM SNP 0039.scaffold00152 830141 1 A C - ReadM SNP 0039.scaffold00152 830268 1 A G - ReadM SNP 0039.scaffold00152 830305 1 A G - ReadM SNP 0039.scaffold00152 830331 1 T C - ReadM SNP 0039.scaffold00152 830376 1 G A - ReadM SNP 0039.scaffold00152 830657 1 C T - ReadM SNP 0039.scaffold00152 830670 1 A C - ReadM SNP 0039.scaffold00152 830675 1 C A - ReadM SNP 0039.scaffold00152 830727 1 T A - ReadM SNP 0039.scaffold00152 830760 1 T C - ReadM INDEL 0039.scaffold00152 830806 1 . A - ReadM SNP 0039.scaffold00152 830887 1 G C - ReadM SNP 0039.scaffold00152 831116 1 G T - ReadM SNP 0039.scaffold00152 831292 1 C T - ReadM SNP 0039.scaffold00152 831298 1 A T - ReadM SNP 0039.scaffold00152 831400 1 G A - ReadM SNP 0039.scaffold00152 831425 1 T A - ReadM INDEL 0039.scaffold00152 831448 1 C . - ReadM SNP 0039.scaffold00152 831482 1 G T - ReadM SNP 0039.scaffold00152 831545 1 C T - ReadM SNP 0039.scaffold00152 831558 1 T A - ReadM SNP 0039.scaffold00152 831580 1 T C - ReadM SNP 0039.scaffold00152 831786 1 C G - ReadM SNP 0039.scaffold00152 831810 1 C T - ReadM SNP 0039.scaffold00152 832168 1 C T - ReadM SNP 0039.scaffold00152 832183 1 G T - ReadM SNP 0039.scaffold00152 832228 1 G A - ReadM SNP 0039.scaffold00152 832298 1 A G - ReadM SNP 0039.scaffold00152 832349 1 G A - ReadM SNP 0039.scaffold00152 832406 1 C G - ReadM SNP 0039.scaffold00152 832472 1 C T - ReadM SNP 0039.scaffold00152 832592 1 A G - ReadM SNP 0039.scaffold00152 832663 1 C T - ReadM SNP 0039.scaffold00152 832734 1 T G - ReadM SNP 0039.scaffold00152 832760 1 T A - ReadM SNP 0039.scaffold00152 832785 1 A G - ReadM SNP 0039.scaffold00152 832997 1 A G - ReadM SNP 0039.scaffold00152 833039 1 G C - ReadM SNP 0039.scaffold00152 833062 1 C A - ReadM SNP 0039.scaffold00152 833171 1 C T - ReadM SNP 0039.scaffold00152 833174 1 G C - ReadM SNP 0039.scaffold00152 833219 1 C T - ReadM SNP 0039.scaffold00152 833282 1 T C - ReadM SNP 0039.scaffold00152 833284 1 G A - ReadM SNP 0039.scaffold00152 833292 1 T C - ReadM SNP 0039.scaffold00152 833447 1 G A - ReadM SNP 0039.scaffold00152 833506 1 G A - ReadM SNP 0039.scaffold00152 833599 1 A G - ReadM SNP 0039.scaffold00152 833785 1 T C - ReadM SNP 0039.scaffold00152 833839 1 T C - ReadM SNP 0039.scaffold00152 833965 1 T C - ReadM SNP 0039.scaffold00152 834003 1 C G - ReadM SNP 0039.scaffold00152 834278 1 A T - ReadM SNP 0039.scaffold00152 834289 1 G A - ReadM SNP 0039.scaffold00152 834417 1 C G - ReadM SNP 0039.scaffold00152 834461 1 C T - ReadM SNP 0039.scaffold00152 834651 1 A T - ReadM SNP 0039.scaffold00152 834754 1 G A - ReadM SNP 0039.scaffold00152 834906 2 TA CG - ReadM SNP 0039.scaffold00152 834955 1 A G - ReadM SNP 0039.scaffold00152 834986 1 T C - ReadM SNP 0039.scaffold00152 835028 1 G T - ReadM SNP 0039.scaffold00152 835058 1 C T - ReadM SNP 0039.scaffold00152 835097 1 T C - ReadM SNP 0039.scaffold00152 835136 1 C T - ScafM INDEL 0039.scaffold00152 836868 1 G . scaffold16831 ScafM SNP 0039.scaffold00152 836902 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 837783 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 837788 5 ....G TCAAA scaffold16831 ScafM INDEL 0039.scaffold00152 837791 3 ... GTT scaffold16831 ScafM INDEL 0039.scaffold00152 837793 1 . C scaffold16831 ScafM SNP 0039.scaffold00152 837796 1 C A scaffold16831 ScafM INDEL 0039.scaffold00152 837797 1 . T scaffold16831 ScafM INDEL 0039.scaffold00152 837798 1 . T scaffold16831 ScafM SNP 0039.scaffold00152 837800 1 G T scaffold16831 ScafM INDEL 0039.scaffold00152 837804 2 .. TC scaffold16831 ScafM INDEL 0039.scaffold00152 837806 1 . T scaffold16831 ScafM INDEL 0039.scaffold00152 837817 2 AA .. scaffold16831 ScafM INDEL 0039.scaffold00152 837939 1 G . scaffold16831 ScafM SNP 0039.scaffold00152 837979 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 837982 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 838000 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 838015 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 838022 1 C T scaffold16831 ReadM SNP 0039.scaffold00152 838255 1 C T - ReadM SNP 0039.scaffold00152 838277 1 T C - ReadM SNP 0039.scaffold00152 838291 1 A C - ReadM SNP 0039.scaffold00152 838358 1 G A - ReadM SNP 0039.scaffold00152 838377 1 T C - ReadM SNP 0039.scaffold00152 838406 1 C T - ReadM SNP 0039.scaffold00152 838421 1 C A - ReadM SNP 0039.scaffold00152 838468 1 G T - ScafM SNP 0039.scaffold00152 838586 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 838605 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 838629 2 CA TG scaffold16831 ScafM SNP 0039.scaffold00152 838664 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 838677 2 TG CA scaffold16831 ScafM SNP 0039.scaffold00152 838683 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 838692 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 838700 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 838712 1 C A scaffold16831 ScafM INDEL 0039.scaffold00152 838713 1 . G scaffold16831 ScafM SNP 0039.scaffold00152 838724 2 AG TT scaffold16831 Both SNP 0039.scaffold00152 838823 1 G A scaffold16831 ReadM SNP 0039.scaffold00152 838829 1 C T - ReadM SNP 0039.scaffold00152 839001 1 A C - ReadM SNP 0039.scaffold00152 839051 1 T C - ReadM SNP 0039.scaffold00152 839065 1 A T - ScafM SNP 0039.scaffold00152 839343 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 839357 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 839373 1 A G scaffold16831 Both SNP 0039.scaffold00152 839517 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 839602 4 .... GCTA scaffold16831 ScafM INDEL 0039.scaffold00152 839644 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 839674 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 839691 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 839706 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 839730 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 839739 1 . T scaffold16831 ReadM SNP 0039.scaffold00152 840073 1 C T - ReadM SNP 0039.scaffold00152 840128 1 G C - Both SNP 0039.scaffold00152 840372 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 840396 2 TT GA scaffold16831 Both SNP 0039.scaffold00152 840480 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 840552 1 A G scaffold16831 ScafM INDEL 0039.scaffold00152 840556 3 TAA ... scaffold16831 Both SNP 0039.scaffold00152 840575 1 T C scaffold16831 Both SNP 0039.scaffold00152 840593 1 A G scaffold16831 Both SNP 0039.scaffold00152 840928 1 T G scaffold16831 ScafM INDEL 0039.scaffold00152 841265 5 ATTTT ..... scaffold16831 ScafM SNP 0039.scaffold00152 841273 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 841290 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 841361 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 841486 1 T A scaffold16831 ScafM INDEL 0039.scaffold00152 841491 3 ... TTA scaffold16831 ScafM SNP 0039.scaffold00152 841502 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 841541 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 841546 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 841619 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 841652 2 AG CA scaffold16831 ScafM SNP 0039.scaffold00152 841670 1 C G scaffold16831 ScafM INDEL 0039.scaffold00152 841675 1 A . scaffold16831 ScafM SNP 0039.scaffold00152 841682 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 841694 1 C A scaffold16831 ScafM INDEL 0039.scaffold00152 841769 4 .... TGTT scaffold16831 ScafM INDEL 0039.scaffold00152 841850 1 . T scaffold16831 ScafM INDEL 0039.scaffold00152 842122 2 .. TA scaffold16831 ScafM SNP 0039.scaffold00152 842147 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 842152 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 842185 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 842199 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 842233 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 842251 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 842256 4 .... ACCG scaffold16831 ScafM INDEL 0039.scaffold00152 842327 4 TCCT .... scaffold16831 ScafM SNP 0039.scaffold00152 842343 2 AA TT scaffold16831 ScafM SNP 0039.scaffold00152 842355 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 842359 1 A G scaffold16831 ScafM INDEL 0039.scaffold00152 842367 3 GAT ... scaffold16831 Both SNP 0039.scaffold00152 842414 1 C T scaffold16831 Both SNP 0039.scaffold00152 842472 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 842582 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 842588 1 G C scaffold16831 ScafM SNP 0039.scaffold00152 842594 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 842603 7 GAATACT ....... scaffold16831 ScafM SNP 0039.scaffold00152 842612 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 842617 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 842642 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 842753 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 842756 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 842777 1 T C scaffold16831 Both SNP 0039.scaffold00152 842900 1 T A scaffold16831 Both SNP 0039.scaffold00152 842954 1 T C scaffold16831 Both SNP 0039.scaffold00152 842987 1 C T scaffold16831 Both SNP 0039.scaffold00152 843092 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 843139 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 843144 1 G C scaffold16831 ScafM SNP 0039.scaffold00152 843188 1 G C scaffold16831 ScafM SNP 0039.scaffold00152 843220 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 843228 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 843236 3 AAC ... scaffold16831 ScafM INDEL 0039.scaffold00152 843271 5 GCCTG ..... scaffold16831 ScafM SNP 0039.scaffold00152 843306 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 843323 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 843355 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 843383 1 T G scaffold16831 ScafM INDEL 0039.scaffold00152 843392 8 ATGCAACT ........ scaffold16831 Both INDEL 0039.scaffold00152 843519 1 A . scaffold16831 Both SNP 0039.scaffold00152 843548 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 843579 1 G T scaffold16831 ScafM INDEL 0039.scaffold00152 843584 5 ..... AGATT scaffold16831 ScafM INDEL 0039.scaffold00152 843586 16 ................ TTAGACTAGTCCTACA scaffold16831 ScafM SNP 0039.scaffold00152 843610 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 843628 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 843631 1 T C scaffold16831 ReadM SNP 0039.scaffold00152 843674 1 T C - ReadM SNP 0039.scaffold00152 843753 1 T C - ReadM SNP 0039.scaffold00152 843774 1 G A - ScafM SNP 0039.scaffold00152 843800 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 843808 1 . A scaffold16831 ScafM SNP 0039.scaffold00152 843862 1 T G scaffold16831 ScafM SNP 0039.scaffold00152 843864 1 G C scaffold16831 Both SNP 0039.scaffold00152 843890 1 C A scaffold16831 Both SNP 0039.scaffold00152 843923 1 T G scaffold16831 Both SNP 0039.scaffold00152 843981 1 A G scaffold16831 Both SNP 0039.scaffold00152 844005 1 G A scaffold16831 Both SNP 0039.scaffold00152 844161 1 A G scaffold16831 ReadM SNP 0039.scaffold00152 844345 1 C T - ReadM SNP 0039.scaffold00152 844372 1 A G - ReadM SNP 0039.scaffold00152 844420 1 C A - ReadM SNP 0039.scaffold00152 844454 1 G T - ReadM SNP 0039.scaffold00152 844458 1 T A - Both INDEL 0039.scaffold00152 844514 2 .. AT scaffold16831 ScafM SNP 0039.scaffold00152 844866 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 844886 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 844910 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 844913 1 G T scaffold16831 Both SNP 0039.scaffold00152 846115 1 G A scaffold16831 ReadM SNP 0039.scaffold00152 846154 1 T C - ReadM SNP 0039.scaffold00152 846473 1 A C - ReadM SNP 0039.scaffold00152 846513 1 T C - ReadM SNP 0039.scaffold00152 846525 1 A T - ReadM SNP 0039.scaffold00152 846573 1 C A - ReadM SNP 0039.scaffold00152 846608 1 T G - ReadM INDEL 0039.scaffold00152 846663 2 .. AT - ScafM SNP 0039.scaffold00152 846827 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 846845 1 T A scaffold16831 ScafM SNP 0039.scaffold00152 846859 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 846863 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 846881 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 846886 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 846919 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 846943 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 846992 3 ... TCA scaffold16831 Both INDEL 0039.scaffold00152 847045 1 G . scaffold16831 Both SNP 0039.scaffold00152 847048 1 C G scaffold16831 Both SNP 0039.scaffold00152 847225 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 847335 1 A G scaffold16831 Both SNP 0039.scaffold00152 847396 1 A C scaffold16831 Both SNP 0039.scaffold00152 847405 1 A G scaffold16831 Both SNP 0039.scaffold00152 847424 1 C A scaffold16831 Both SNP 0039.scaffold00152 847475 1 A G scaffold16831 Both SNP 0039.scaffold00152 847478 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 847774 1 A G scaffold16831 ScafM INDEL 0039.scaffold00152 847835 2 TC .. scaffold16831 ScafM SNP 0039.scaffold00152 847869 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 848048 2 .. TT scaffold16831 ScafM INDEL 0039.scaffold00152 848117 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 848369 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 848394 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 848416 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 848560 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 848573 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 848585 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 848662 1 G T scaffold16831 ScafM SNP 0039.scaffold00152 848817 1 A T scaffold16831 Both SNP 0039.scaffold00152 848897 1 C G scaffold16831 Both SNP 0039.scaffold00152 848995 1 G A scaffold16831 Both SNP 0039.scaffold00152 849309 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 849424 1 G A scaffold16831 ScafM SNP 0039.scaffold00152 849512 1 G A scaffold16831 Both SNP 0039.scaffold00152 849517 1 T C scaffold16831 Both INDEL 0039.scaffold00152 849729 1 . T scaffold16831 ScafM INDEL 0039.scaffold00152 849832 9 GATAAGAAA ......... scaffold16831 Both SNP 0039.scaffold00152 849886 1 A G scaffold16831 Both SNP 0039.scaffold00152 849902 1 G A scaffold16831 Both SNP 0039.scaffold00152 849908 1 C T scaffold16831 Both SNP 0039.scaffold00152 850141 1 T C scaffold16831 Both SNP 0039.scaffold00152 850157 1 T A scaffold16831 Both SNP 0039.scaffold00152 850209 1 A G scaffold16831 Both SNP 0039.scaffold00152 850226 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850264 1 G A scaffold16831 ScafM INDEL 0039.scaffold00152 850275 1 T . scaffold16831 ScafM SNP 0039.scaffold00152 850285 1 C A scaffold16831 ScafM SNP 0039.scaffold00152 850287 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 850291 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 850296 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850304 1 A T scaffold16831 ScafM SNP 0039.scaffold00152 850306 1 A C scaffold16831 ScafM SNP 0039.scaffold00152 850311 1 T C scaffold16831 ScafM INDEL 0039.scaffold00152 850345 2 .. GA scaffold16831 ScafM INDEL 0039.scaffold00152 850348 2 .. CC scaffold16831 ScafM SNP 0039.scaffold00152 850360 1 T C scaffold16831 ScafM SNP 0039.scaffold00152 850394 1 C T scaffold16831 ScafM SNP 0039.scaffold00152 850403 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850409 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850411 1 C G scaffold16831 ScafM SNP 0039.scaffold00152 850413 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850433 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850631 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850716 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850773 1 A G scaffold16831 ScafM SNP 0039.scaffold00152 850795 1 C T scaffold16831 ScafM INDEL 0039.scaffold00152 855098 2 AA .. scaffold12954 ScafM SNP 0039.scaffold00152 855117 1 C G scaffold12954 ScafM INDEL 0039.scaffold00152 855136 1 . A scaffold12954 ScafM SNP 0039.scaffold00152 855150 1 G A scaffold12954 ScafM SNP 0039.scaffold00152 855163 1 T C scaffold12954 ScafM SNP 0039.scaffold00152 855185 1 C T scaffold12954 ScafM INDEL 0039.scaffold00152 855191 1 . A scaffold12954 ScafM INDEL 0039.scaffold00152 855193 2 .. AG scaffold12954 ScafM INDEL 0039.scaffold00152 855195 7 ....... ATAAGGT scaffold12954 ScafM INDEL 0039.scaffold00152 855198 3 ... AAG scaffold12954 ScafM INDEL 0039.scaffold00152 855214 2 GC .. scaffold12954 ScafM INDEL 0039.scaffold00152 855464 15 ............... TTGGAGATAAGTTAA scaffold12954 ScafM INDEL 0039.scaffold00152 855465 5 ..... CTTTG scaffold12954 ScafM SNP 0039.scaffold00152 855482 1 T A scaffold12954 ScafM SNP 0039.scaffold00152 855496 1 A G scaffold12954 ScafM SNP 0039.scaffold00152 855505 1 T A scaffold12954 ScafM SNP 0039.scaffold00152 855524 1 A C scaffold12954 ScafM SNP 0039.scaffold00152 855529 1 G T scaffold12954 ScafM SNP 0039.scaffold00152 855547 1 T C scaffold12954 ScafM SNP 0039.scaffold00152 855559 1 T C scaffold12954 Both SNP 0039.scaffold00152 855604 1 T C scaffold12954 Both SNP 0039.scaffold00152 855641 1 C T scaffold12954 Both SNP 0039.scaffold00152 855661 1 A C scaffold12954 Both SNP 0039.scaffold00152 855720 1 C T scaffold12954 Both SNP 0039.scaffold00152 855739 1 A G scaffold12954 Both SNP 0039.scaffold00152 855845 1 C A scaffold12954 Both SNP 0039.scaffold00152 855856 1 G A scaffold12954 ScafM INDEL 0039.scaffold00152 855867 1 C . scaffold12954 ScafM INDEL 0039.scaffold00152 855869 2 TG .. scaffold12954 ScafM SNP 0039.scaffold00152 855905 1 A G scaffold12954 ScafM SNP 0039.scaffold00152 855910 1 T A scaffold12954 Both SNP 0039.scaffold00152 855920 1 C T scaffold12954 Both SNP 0039.scaffold00152 855957 1 T C scaffold12954 Both SNP 0039.scaffold00152 855979 1 C T scaffold12954 Both SNP 0039.scaffold00152 856020 1 A G scaffold12954 ScafM SNP 0039.scaffold00152 856157 1 C T scaffold12954 ScafM SNP 0039.scaffold00152 856335 1 A T scaffold12954 ScafM SNP 0039.scaffold00152 856359 1 A T scaffold12954 ScafM INDEL 0039.scaffold00152 856564 4 .... TACG scaffold12954 ScafM SNP 0039.scaffold00152 856578 2 AG TA scaffold12954 ScafM SNP 0039.scaffold00152 856581 1 G A scaffold12954 ScafM SNP 0039.scaffold00152 856600 1 G A scaffold12954 ScafM SNP 0039.scaffold00152 856606 1 A T scaffold12954 ScafM SNP 0039.scaffold00152 856615 1 T A scaffold12954 ScafM SNP 0039.scaffold00152 856624 1 A C scaffold12954 ScafM SNP 0039.scaffold00152 856675 1 A T scaffold12954 ReadM INDEL 0039.scaffold00152 856689 1 . G - ScafM SNP 0039.scaffold00152 856698 1 G A scaffold12954 Both SNP 0039.scaffold00152 856735 1 T G scaffold12954 ScafM INDEL 0039.scaffold00152 856740 1 T . scaffold12954 ScafM SNP 0039.scaffold00152 856747 1 A C scaffold12954 ScafM SNP 0039.scaffold00152 856751 1 C G scaffold12954 ScafM SNP 0039.scaffold00152 856761 1 C T scaffold12954 ScafM SNP 0039.scaffold00152 856777 1 C G scaffold12954 ScafM SNP 0039.scaffold00152 856793 1 G A scaffold12954 ScafM SNP 0039.scaffold00152 856853 4 CGAG TTCA scaffold12954 ScafM SNP 0039.scaffold00152 856862 1 T C scaffold12954 ScafM SNP 0039.scaffold00152 856871 1 C T scaffold12954 ReadM INDEL 0039.scaffold00152 856895 1 . C - ScafM INDEL 0039.scaffold00152 856895 2 TC .. scaffold12954 Both SNP 0039.scaffold00152 856903 1 T A scaffold12954 ScafM SNP 0039.scaffold00152 856918 1 A T scaffold12954 ScafM SNP 0039.scaffold00152 856925 1 G T scaffold12954 Both SNP 0039.scaffold00152 856935 1 C T scaffold12954 ScafM SNP 0039.scaffold00152 856938 1 T A scaffold12954 ScafM SNP 0039.scaffold00152 856946 1 T G scaffold12954 ScafM INDEL 0039.scaffold00152 856961 1 . T scaffold12954 ScafM INDEL 0039.scaffold00152 856964 2 .. AT scaffold12954 ScafM SNP 0039.scaffold00152 856977 1 G C scaffold12954 ScafM SNP 0039.scaffold00152 856993 1 T A scaffold12954 Both SNP 0039.scaffold00152 856995 1 C T scaffold12954 ScafM INDEL 0039.scaffold00152 856999 5 ..... GTTCA scaffold12954 ScafM INDEL 0039.scaffold00152 857000 1 . A scaffold12954 ScafM INDEL 0039.scaffold00152 857002 2 .. AT scaffold12954 ScafM INDEL 0039.scaffold00152 857007 3 ... CTA scaffold12954 ScafM INDEL 0039.scaffold00152 857010 2 .. CT scaffold12954 ReadM SNP 0039.scaffold00152 857014 1 T C - ScafM SNP 0039.scaffold00152 857017 1 G A scaffold12954 ReadM SNP 0039.scaffold00152 857039 1 C T - ScafM INDEL 0039.scaffold00152 857039 2 .. AT scaffold12954 ScafM INDEL 0039.scaffold00152 857040 1 . C scaffold12954 ScafM INDEL 0039.scaffold00152 857043 1 . G scaffold12954 ScafM SNP 0039.scaffold00152 857049 1 G A scaffold12954 ScafM SNP 0039.scaffold00152 857058 1 C G scaffold12954 ScafM SNP 0039.scaffold00152 857125 1 C A scaffold12954 ScafM SNP 0039.scaffold00152 857398 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 857465 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 857470 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 857485 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 857758 1 T A scaffold1026 ScafM INDEL 0039.scaffold00152 857765 3 ... AGT scaffold1026 ScafM INDEL 0039.scaffold00152 857776 1 A . scaffold1026 ScafM INDEL 0039.scaffold00152 857784 5 GAAAC ..... scaffold1026 ScafM SNP 0039.scaffold00152 857854 1 A T scaffold1026 ScafM INDEL 0039.scaffold00152 857861 42 GTCTAAATGAAAGAAAGTTAGGTCTAAATGAAAGAAACTTAG .......................................... scaffold1026 ScafM SNP 0039.scaffold00152 857930 1 A C scaffold1026 ScafM SNP 0039.scaffold00152 857937 1 A T scaffold1026 ScafM SNP 0039.scaffold00152 857961 1 G C scaffold1026 ScafM SNP 0039.scaffold00152 858042 1 C T scaffold1026 ScafM SNP 0039.scaffold00152 858066 1 A G scaffold1026 ScafM SNP 0039.scaffold00152 858092 1 T C scaffold1026 ScafM SNP 0039.scaffold00152 858119 1 T G scaffold1026 ScafM SNP 0039.scaffold00152 858169 1 C T scaffold1026 ScafM INDEL 0039.scaffold00152 858191 2 TT .. scaffold1026 ScafM SNP 0039.scaffold00152 858237 1 C T scaffold1026 ScafM INDEL 0039.scaffold00152 858247 1 . A scaffold1026 ScafM SNP 0039.scaffold00152 858257 1 T C scaffold1026 ScafM SNP 0039.scaffold00152 858274 2 TT CG scaffold1026 ScafM SNP 0039.scaffold00152 858317 1 G A scaffold1026 ScafM INDEL 0039.scaffold00152 858390 2 .. TA scaffold1026 ScafM SNP 0039.scaffold00152 858445 1 G T scaffold1026 ScafM SNP 0039.scaffold00152 858454 1 T C scaffold1026 ScafM SNP 0039.scaffold00152 858477 1 C A scaffold1026 ScafM SNP 0039.scaffold00152 858657 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 858669 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 858680 2 TC CA scaffold9962 ScafM SNP 0039.scaffold00152 858713 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 858744 2 .. TG scaffold9962 ScafM INDEL 0039.scaffold00152 858747 1 . G scaffold9962 ScafM INDEL 0039.scaffold00152 858748 1 . A scaffold9962 ScafM INDEL 0039.scaffold00152 858749 5 ..... TAATC scaffold9962 ScafM SNP 0039.scaffold00152 858780 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 858809 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 859124 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 859351 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 859353 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 859776 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 860101 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 860105 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 860114 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 860119 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 860159 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 860176 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 860192 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 860194 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 860244 1 G T scaffold9962 ReadM SNP 0039.scaffold00152 860539 1 G A - ReadM SNP 0039.scaffold00152 860569 1 A T - ReadM SNP 0039.scaffold00152 860608 1 G A - Both SNP 0039.scaffold00152 860802 1 C A scaffold9962 Both SNP 0039.scaffold00152 860840 1 G A scaffold9962 Both SNP 0039.scaffold00152 860895 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 860938 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 860976 7 ACTGAAC ....... scaffold9962 ScafM INDEL 0039.scaffold00152 860984 1 G . scaffold9962 ScafM INDEL 0039.scaffold00152 860987 1 A . scaffold9962 Both SNP 0039.scaffold00152 861132 1 G A scaffold9962 Both SNP 0039.scaffold00152 861157 1 C T scaffold9962 Both SNP 0039.scaffold00152 861367 1 G T scaffold9962 Both INDEL 0039.scaffold00152 861389 1 T . scaffold9962 Both SNP 0039.scaffold00152 861434 1 A G scaffold9962 Both SNP 0039.scaffold00152 861437 1 A C scaffold9962 Both SNP 0039.scaffold00152 861513 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 861693 1 T C - ReadM SNP 0039.scaffold00152 861765 1 C A - ReadM SNP 0039.scaffold00152 861768 1 C T - ReadM SNP 0039.scaffold00152 861911 1 G A - Both SNP 0039.scaffold00152 862067 1 C T scaffold9962 Both SNP 0039.scaffold00152 862109 1 C G scaffold9962 Both INDEL 0039.scaffold00152 862157 1 . G scaffold9962 Both INDEL 0039.scaffold00152 862220 1 C . scaffold9962 Both SNP 0039.scaffold00152 862246 1 T C scaffold9962 Both SNP 0039.scaffold00152 862274 1 T C scaffold9962 Both SNP 0039.scaffold00152 862373 1 G C scaffold9962 Both SNP 0039.scaffold00152 862443 1 T A scaffold9962 Both SNP 0039.scaffold00152 862473 1 A G scaffold9962 Both SNP 0039.scaffold00152 862501 1 A T scaffold9962 Both SNP 0039.scaffold00152 862802 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 862864 2 GA AC scaffold9962 Both SNP 0039.scaffold00152 863000 1 A C scaffold9962 ReadM SNP 0039.scaffold00152 863038 1 T A - ReadM SNP 0039.scaffold00152 863047 1 T G - ReadM SNP 0039.scaffold00152 863105 1 G A - Both SNP 0039.scaffold00152 863187 1 C T scaffold9962 Both SNP 0039.scaffold00152 863265 1 C T scaffold9962 Both SNP 0039.scaffold00152 863274 1 A G scaffold9962 Both SNP 0039.scaffold00152 863323 1 A G scaffold9962 Both SNP 0039.scaffold00152 863368 1 T G scaffold9962 Both SNP 0039.scaffold00152 863445 1 T G scaffold9962 Both INDEL 0039.scaffold00152 863562 1 . T scaffold9962 ScafM SNP 0039.scaffold00152 863564 1 A T scaffold9962 Both SNP 0039.scaffold00152 863802 1 G T scaffold9962 Both SNP 0039.scaffold00152 863856 1 A G scaffold9962 Both SNP 0039.scaffold00152 863884 1 G T scaffold9962 Both SNP 0039.scaffold00152 863970 1 T C scaffold9962 Both SNP 0039.scaffold00152 864067 1 G A scaffold9962 Both SNP 0039.scaffold00152 864124 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 864134 1 T A scaffold9962 Both INDEL 0039.scaffold00152 864158 2 TG .. scaffold9962 Both SNP 0039.scaffold00152 864177 1 G C scaffold9962 Both SNP 0039.scaffold00152 864286 1 A G scaffold9962 Both SNP 0039.scaffold00152 864298 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 864369 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 864374 7 TCCCTAG ....... scaffold9962 ScafM SNP 0039.scaffold00152 864400 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 864415 3 TTG ... scaffold9962 ScafM SNP 0039.scaffold00152 864442 1 C T scaffold9962 Both SNP 0039.scaffold00152 864508 1 G C scaffold9962 Both INDEL 0039.scaffold00152 864667 1 T . scaffold9962 Both INDEL 0039.scaffold00152 864749 1 C . scaffold9962 Both SNP 0039.scaffold00152 864789 1 C A scaffold9962 Both SNP 0039.scaffold00152 865002 1 C T scaffold9962 Both SNP 0039.scaffold00152 865365 1 A C scaffold9962 Both SNP 0039.scaffold00152 865496 1 G A scaffold9962 Both SNP 0039.scaffold00152 865560 1 A T scaffold9962 Both SNP 0039.scaffold00152 865613 1 A G scaffold9962 Both SNP 0039.scaffold00152 865671 1 G A scaffold9962 Both INDEL 0039.scaffold00152 865682 1 . A scaffold9962 ScafM SNP 0039.scaffold00152 865687 1 C G scaffold9962 Both SNP 0039.scaffold00152 865831 1 T G scaffold9962 Both SNP 0039.scaffold00152 866078 1 C A scaffold9962 Both SNP 0039.scaffold00152 866224 1 G A scaffold9962 Both SNP 0039.scaffold00152 866360 1 T G scaffold9962 Both SNP 0039.scaffold00152 866444 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 866534 7 ....... TCTGGAG scaffold9962 Both SNP 0039.scaffold00152 866625 1 G A scaffold9962 Both SNP 0039.scaffold00152 866842 1 T A scaffold9962 Both SNP 0039.scaffold00152 867027 1 C T scaffold9962 ReadM SNP 0039.scaffold00152 867625 2 TA CC - Both SNP 0039.scaffold00152 867707 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 867843 1 . G scaffold9962 ScafM INDEL 0039.scaffold00152 867862 9 ......... CGGCTCTGG scaffold9962 Both SNP 0039.scaffold00152 867920 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 868243 1 A T - ReadM SNP 0039.scaffold00152 868277 1 T A - Both SNP 0039.scaffold00152 868415 1 A T scaffold9962 Both SNP 0039.scaffold00152 868421 1 G A scaffold9962 Both SNP 0039.scaffold00152 868499 1 T A scaffold9962 Both SNP 0039.scaffold00152 868548 1 A G scaffold9962 Both SNP 0039.scaffold00152 868630 1 A G scaffold9962 Both SNP 0039.scaffold00152 868657 1 T C scaffold9962 Both INDEL 0039.scaffold00152 868738 2 AA .. scaffold9962 ScafM SNP 0039.scaffold00152 868766 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 868833 3 TTT ... scaffold9962 Both SNP 0039.scaffold00152 868868 1 A T scaffold9962 Both SNP 0039.scaffold00152 869012 1 C G scaffold9962 ScafM INDEL 0039.scaffold00152 869270 2 .. AA scaffold9962 Both SNP 0039.scaffold00152 869426 1 C T scaffold9962 Both SNP 0039.scaffold00152 869629 1 G A scaffold9962 Both SNP 0039.scaffold00152 869679 1 C A scaffold9962 Both SNP 0039.scaffold00152 869723 1 T A scaffold9962 Both SNP 0039.scaffold00152 869737 1 A T scaffold9962 Both INDEL 0039.scaffold00152 870177 1 T . scaffold9962 Both SNP 0039.scaffold00152 870314 2 GG AA scaffold9962 Both SNP 0039.scaffold00152 870460 1 A G scaffold9962 Both SNP 0039.scaffold00152 870488 1 T A scaffold9962 Both SNP 0039.scaffold00152 870681 1 C T scaffold9962 Both SNP 0039.scaffold00152 870833 1 A G scaffold9962 Both SNP 0039.scaffold00152 871142 1 C T scaffold9962 Both SNP 0039.scaffold00152 871146 1 G A scaffold9962 Both SNP 0039.scaffold00152 871377 1 T C scaffold9962 Both SNP 0039.scaffold00152 871436 1 A T scaffold9962 Both SNP 0039.scaffold00152 871570 1 T A scaffold9962 Both SNP 0039.scaffold00152 871687 1 T G scaffold9962 Both SNP 0039.scaffold00152 871716 1 A C scaffold9962 Both SNP 0039.scaffold00152 871722 1 T G scaffold9962 Both SNP 0039.scaffold00152 871766 1 T G scaffold9962 Both SNP 0039.scaffold00152 871791 1 G A scaffold9962 Both SNP 0039.scaffold00152 872033 1 A G scaffold9962 Both SNP 0039.scaffold00152 872079 1 C G scaffold9962 Both SNP 0039.scaffold00152 872132 1 C G scaffold9962 ReadM INDEL 0039.scaffold00152 872241 1 A . - ReadM SNP 0039.scaffold00152 872258 1 A G - ReadM SNP 0039.scaffold00152 872295 1 G A - ReadM SNP 0039.scaffold00152 872481 1 A G - ScafM SNP 0039.scaffold00152 872612 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 872622 3 CCT ... scaffold9962 Both SNP 0039.scaffold00152 872840 1 G A scaffold9962 Both SNP 0039.scaffold00152 873010 1 A C scaffold9962 Both SNP 0039.scaffold00152 873303 1 T C scaffold9962 Both SNP 0039.scaffold00152 873388 1 C T scaffold9962 Both SNP 0039.scaffold00152 873498 1 A G scaffold9962 Both INDEL 0039.scaffold00152 873554 2 AA .. scaffold9962 ReadM SNP 0039.scaffold00152 873741 1 G T - Both SNP 0039.scaffold00152 873858 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 873988 1 . C scaffold9962 ScafM SNP 0039.scaffold00152 873990 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 873996 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 874099 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 874116 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 874128 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 874153 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 874158 1 A G scaffold9962 Both SNP 0039.scaffold00152 874163 1 T C scaffold9962 Both SNP 0039.scaffold00152 874276 1 G C scaffold9962 Both SNP 0039.scaffold00152 874300 1 C A scaffold9962 Both SNP 0039.scaffold00152 874322 1 C T scaffold9962 Both INDEL 0039.scaffold00152 874450 1 A . scaffold9962 Both SNP 0039.scaffold00152 874536 1 G T scaffold9962 Both SNP 0039.scaffold00152 874549 1 C A scaffold9962 Both SNP 0039.scaffold00152 874647 1 A T scaffold9962 Both SNP 0039.scaffold00152 874668 1 G C scaffold9962 Both INDEL 0039.scaffold00152 874678 1 . A scaffold9962 Both SNP 0039.scaffold00152 874698 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 874890 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 874908 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 874913 7 TTCATCA ....... scaffold9962 Both SNP 0039.scaffold00152 874973 1 A T scaffold9962 Both SNP 0039.scaffold00152 874987 1 T C scaffold9962 Both SNP 0039.scaffold00152 875001 1 G A scaffold9962 ReadM SNP 0039.scaffold00152 875072 1 T C - ReadM SNP 0039.scaffold00152 875136 1 G A - ScafM INDEL 0039.scaffold00152 875650 7 ACTTAGG ....... scaffold9962 ScafM SNP 0039.scaffold00152 875812 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 875832 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 875931 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 875954 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 876014 1 T G scaffold9962 Both SNP 0039.scaffold00152 876050 1 C G scaffold9962 Both SNP 0039.scaffold00152 876099 1 G A scaffold9962 Both SNP 0039.scaffold00152 876197 1 A G scaffold9962 Both SNP 0039.scaffold00152 876529 1 T A scaffold9962 Both INDEL 0039.scaffold00152 876775 1 G . scaffold9962 Both SNP 0039.scaffold00152 876964 1 A C scaffold9962 Both SNP 0039.scaffold00152 877004 1 G C scaffold9962 Both SNP 0039.scaffold00152 877039 1 T C scaffold9962 Both INDEL 0039.scaffold00152 877152 1 . C scaffold9962 Both SNP 0039.scaffold00152 877158 1 T C scaffold9962 Both SNP 0039.scaffold00152 877314 1 T C scaffold9962 Both SNP 0039.scaffold00152 877435 1 A G scaffold9962 Both SNP 0039.scaffold00152 877564 1 T A scaffold9962 Both SNP 0039.scaffold00152 877624 1 G T scaffold9962 Both SNP 0039.scaffold00152 877703 1 C A scaffold9962 Both SNP 0039.scaffold00152 877943 1 A T scaffold9962 Both SNP 0039.scaffold00152 877995 1 T C scaffold9962 Both SNP 0039.scaffold00152 878024 1 C A scaffold9962 Both SNP 0039.scaffold00152 878090 1 G A scaffold9962 Both SNP 0039.scaffold00152 878118 1 T C scaffold9962 Both SNP 0039.scaffold00152 878197 1 A T scaffold9962 Both SNP 0039.scaffold00152 878207 1 C T scaffold9962 Both INDEL 0039.scaffold00152 878237 1 . T scaffold9962 Both SNP 0039.scaffold00152 878289 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 878301 2 GT AC scaffold9962 ScafM SNP 0039.scaffold00152 878354 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 878373 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 878380 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 878382 1 G C scaffold9962 ScafM INDEL 0039.scaffold00152 878391 1 . T scaffold9962 ScafM SNP 0039.scaffold00152 878398 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 878406 1 A C scaffold9962 Both SNP 0039.scaffold00152 878465 1 T G scaffold9962 Both SNP 0039.scaffold00152 878549 1 G A scaffold9962 Both SNP 0039.scaffold00152 878567 1 A G scaffold9962 Both SNP 0039.scaffold00152 878616 1 A T scaffold9962 Both SNP 0039.scaffold00152 878624 1 G A scaffold9962 Both SNP 0039.scaffold00152 878632 1 G A scaffold9962 Both SNP 0039.scaffold00152 878714 1 G T scaffold9962 Both INDEL 0039.scaffold00152 878745 1 A . scaffold9962 Both SNP 0039.scaffold00152 878804 1 A G scaffold9962 Both SNP 0039.scaffold00152 878806 1 A G scaffold9962 Both SNP 0039.scaffold00152 878925 1 A G scaffold9962 Both SNP 0039.scaffold00152 879016 1 G A scaffold9962 Both SNP 0039.scaffold00152 879055 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 879058 1 . A scaffold9962 ScafM SNP 0039.scaffold00152 879071 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 879075 1 C G scaffold9962 ReadM INDEL 0039.scaffold00152 881344 1 . C - ReadM SNP 0039.scaffold00152 881395 1 C T - ReadM SNP 0039.scaffold00152 881534 1 T C - ReadM SNP 0039.scaffold00152 881616 1 C G - ReadM SNP 0039.scaffold00152 881619 1 C A - ReadM SNP 0039.scaffold00152 881861 1 G A - ReadM SNP 0039.scaffold00152 881870 1 C T - ReadM SNP 0039.scaffold00152 881923 1 T C - ReadM SNP 0039.scaffold00152 882032 1 A C - Both SNP 0039.scaffold00152 882125 2 AA GT scaffold9962 ScafM SNP 0039.scaffold00152 882223 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 882261 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 882281 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 882283 1 G C scaffold9962 ScafM INDEL 0039.scaffold00152 882340 1 T . scaffold9962 ScafM INDEL 0039.scaffold00152 882350 1 . G scaffold9962 ScafM SNP 0039.scaffold00152 882353 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 885774 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 885800 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 885807 1 T A scaffold1786 ScafM SNP 0039.scaffold00152 885833 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 885842 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 885852 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 885864 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 885879 2 AA TT scaffold1786 ScafM SNP 0039.scaffold00152 885903 1 T C scaffold1786 ScafM INDEL 0039.scaffold00152 885914 3 ... GAA scaffold1786 ScafM SNP 0039.scaffold00152 885918 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 885921 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 885927 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 885972 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 885984 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 886026 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886080 1 C A scaffold1786 ScafM INDEL 0039.scaffold00152 886084 7 GCCGTTT ....... scaffold1786 ScafM SNP 0039.scaffold00152 886116 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886125 1 T A scaffold1786 ScafM SNP 0039.scaffold00152 886133 1 C G scaffold1786 ScafM SNP 0039.scaffold00152 886138 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 886140 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886149 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886163 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 886188 1 C G scaffold1786 ScafM SNP 0039.scaffold00152 886235 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 886258 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 886260 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886266 2 GT AG scaffold1786 ScafM SNP 0039.scaffold00152 886310 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 886320 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886339 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 886341 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886374 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 886398 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 886410 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886416 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886422 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886469 1 T A scaffold1786 ScafM INDEL 0039.scaffold00152 886505 1 . T scaffold1786 ScafM SNP 0039.scaffold00152 886521 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 886527 2 GT TG scaffold1786 ScafM SNP 0039.scaffold00152 886588 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886596 2 TT AA scaffold1786 ScafM SNP 0039.scaffold00152 886613 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 886622 1 A C scaffold1786 ScafM SNP 0039.scaffold00152 886640 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 886831 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 886840 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 886857 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 886861 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 886874 2 GC AT scaffold1786 ScafM SNP 0039.scaffold00152 887083 1 T C scaffold1786 ScafM INDEL 0039.scaffold00152 887100 1 G . scaffold1786 ScafM INDEL 0039.scaffold00152 887104 1 . A scaffold1786 ScafM SNP 0039.scaffold00152 887125 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 887134 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 887145 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887152 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887171 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887202 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 887300 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 887312 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 887323 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887335 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 887374 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887387 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887424 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 887431 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 887435 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 887459 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 887463 2 AG GA scaffold1786 ScafM SNP 0039.scaffold00152 887471 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 887485 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 887490 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 887508 1 T A scaffold1786 ScafM SNP 0039.scaffold00152 887513 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 887516 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 887529 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 887534 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 887542 1 G A scaffold1786 ReadM SNP 0039.scaffold00152 888125 1 T C - ReadM SNP 0039.scaffold00152 888160 1 G A - ScafM SNP 0039.scaffold00152 888495 2 AA GG scaffold1786 ScafM SNP 0039.scaffold00152 888515 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 888523 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 888528 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 888537 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 888550 1 A C scaffold1786 ScafM SNP 0039.scaffold00152 888556 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 888566 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 888584 2 GT TC scaffold1786 ScafM SNP 0039.scaffold00152 888614 1 G C scaffold1786 ScafM SNP 0039.scaffold00152 888617 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 888674 1 G C scaffold1786 ScafM SNP 0039.scaffold00152 888689 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 888691 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 888710 1 A C scaffold1786 ScafM SNP 0039.scaffold00152 888729 1 C T scaffold1786 ScafM SNP 0039.scaffold00152 888744 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 898588 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 898590 1 G T scaffold1786 ScafM INDEL 0039.scaffold00152 898595 2 AA .G scaffold1786 ScafM SNP 0039.scaffold00152 898599 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 898617 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 898648 1 A T scaffold1786 ScafM SNP 0039.scaffold00152 898652 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 898711 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 898716 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 898720 1 T G scaffold1786 ScafM SNP 0039.scaffold00152 898738 1 G C scaffold1786 ScafM SNP 0039.scaffold00152 898787 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 898819 1 G T scaffold1786 ScafM SNP 0039.scaffold00152 898832 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 898900 1 C G scaffold1786 ScafM SNP 0039.scaffold00152 898918 1 T A scaffold1786 ScafM SNP 0039.scaffold00152 898955 1 C A scaffold1786 ScafM SNP 0039.scaffold00152 898962 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 898965 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 899011 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 899013 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 899017 1 G A scaffold1786 ScafM SNP 0039.scaffold00152 899070 1 A G scaffold1786 ScafM SNP 0039.scaffold00152 899084 1 A G scaffold1786 ScafM INDEL 0039.scaffold00152 899113 1 A . scaffold1786 ScafM SNP 0039.scaffold00152 899120 1 T A scaffold1786 ScafM SNP 0039.scaffold00152 899133 1 T C scaffold1786 ScafM SNP 0039.scaffold00152 899435 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 899567 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 899573 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 899575 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 899592 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 899639 3 ATT ... scaffold9962 ScafM SNP 0039.scaffold00152 899662 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 899708 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 900011 7 AGTCTCA ....... scaffold9962 ScafM INDEL 0039.scaffold00152 900027 2 AA .. scaffold9962 ScafM INDEL 0039.scaffold00152 900033 1 G . scaffold9962 ScafM INDEL 0039.scaffold00152 900035 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 900041 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 900053 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 900721 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 900750 1 . T scaffold9962 ScafM INDEL 0039.scaffold00152 900893 4 AAAT .... scaffold9962 ScafM SNP 0039.scaffold00152 900906 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 900915 1 G C scaffold9962 Both INDEL 0039.scaffold00152 900938 1 . C scaffold9962 Both SNP 0039.scaffold00152 900977 1 C T scaffold9962 Both SNP 0039.scaffold00152 901054 1 T C scaffold9962 Both SNP 0039.scaffold00152 901077 1 A G scaffold9962 Both SNP 0039.scaffold00152 901085 1 G A scaffold9962 Both INDEL 0039.scaffold00152 901108 1 C . scaffold9962 Both SNP 0039.scaffold00152 901149 1 A T scaffold9962 Both SNP 0039.scaffold00152 901197 1 G A scaffold9962 Both SNP 0039.scaffold00152 901217 1 A G scaffold9962 Both SNP 0039.scaffold00152 901222 1 C T scaffold9962 Both SNP 0039.scaffold00152 901342 1 A G scaffold9962 Both SNP 0039.scaffold00152 901387 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 901418 1 G C scaffold9962 ScafM INDEL 0039.scaffold00152 901436 5 ..... TATGA scaffold9962 Both SNP 0039.scaffold00152 901528 1 G A scaffold9962 Both SNP 0039.scaffold00152 901554 1 A C scaffold9962 Both INDEL 0039.scaffold00152 901567 1 . T scaffold9962 ScafM INDEL 0039.scaffold00152 901588 7 ....... AATTAGG scaffold9962 ScafM SNP 0039.scaffold00152 901607 2 TT AC scaffold9962 ScafM INDEL 0039.scaffold00152 901635 9 ......... AAAGCTTTC scaffold9962 ScafM INDEL 0039.scaffold00152 901659 3 ... GTT scaffold9962 ScafM INDEL 0039.scaffold00152 901660 1 . C scaffold9962 Both SNP 0039.scaffold00152 901710 1 G A scaffold9962 Both INDEL 0039.scaffold00152 901739 1 . A scaffold9962 Both SNP 0039.scaffold00152 901755 1 G A scaffold9962 Both SNP 0039.scaffold00152 901848 1 T C scaffold9962 Both SNP 0039.scaffold00152 901979 1 A G scaffold9962 Both SNP 0039.scaffold00152 902033 1 A G scaffold9962 Both SNP 0039.scaffold00152 902182 1 C G scaffold9962 Both SNP 0039.scaffold00152 902200 1 G A scaffold9962 Both SNP 0039.scaffold00152 902208 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 902232 2 .. AA scaffold9962 Both SNP 0039.scaffold00152 902266 1 T A scaffold9962 Both SNP 0039.scaffold00152 902294 1 C T scaffold9962 Both SNP 0039.scaffold00152 902385 1 A G scaffold9962 Both SNP 0039.scaffold00152 902398 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 902483 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 902485 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 902495 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 902513 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 902558 1 . A scaffold9962 ScafM SNP 0039.scaffold00152 902585 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 902593 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 902611 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 902615 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 902626 1 A C scaffold9962 Both SNP 0039.scaffold00152 902641 1 A C scaffold9962 Both SNP 0039.scaffold00152 902675 1 A G scaffold9962 Both SNP 0039.scaffold00152 902715 1 G A scaffold9962 Both SNP 0039.scaffold00152 903145 1 T C scaffold9962 Both SNP 0039.scaffold00152 903166 1 A G scaffold9962 Both SNP 0039.scaffold00152 903209 1 G A scaffold9962 Both SNP 0039.scaffold00152 903234 1 A G scaffold9962 Both INDEL 0039.scaffold00152 903246 1 T . scaffold9962 ScafM INDEL 0039.scaffold00152 903318 1 A . scaffold9962 ScafM INDEL 0039.scaffold00152 903345 1 G . scaffold9962 ScafM SNP 0039.scaffold00152 903354 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 903366 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 903390 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 903394 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 903396 2 AA GC scaffold9962 ScafM SNP 0039.scaffold00152 903435 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 903449 2 .. GA scaffold9962 Both SNP 0039.scaffold00152 903495 1 C T scaffold9962 Both INDEL 0039.scaffold00152 903518 1 . A scaffold9962 Both SNP 0039.scaffold00152 903652 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 903856 8 AGTTCTAT ........ scaffold9962 ReadM SNP 0039.scaffold00152 904154 1 T C - Both INDEL 0039.scaffold00152 904672 1 T . scaffold9962 Both SNP 0039.scaffold00152 904684 1 T G scaffold9962 Both SNP 0039.scaffold00152 904731 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 904760 31 ............................... GAAGCTAAACTTAAGAATAAAAAATATATTA scaffold9962 ScafM SNP 0039.scaffold00152 904785 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 904791 2 TT .. scaffold9962 ScafM SNP 0039.scaffold00152 904839 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 904866 8 AGAATCAA ........ scaffold9962 Both SNP 0039.scaffold00152 904965 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 905018 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 905032 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 905036 6 ATCAAT ...... scaffold9962 Both SNP 0039.scaffold00152 905079 1 T A scaffold9962 Both SNP 0039.scaffold00152 905085 1 C T scaffold9962 Both SNP 0039.scaffold00152 905256 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 905302 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 905363 4 .... GGAT scaffold9962 ScafM SNP 0039.scaffold00152 905366 2 AA TG scaffold9962 Both SNP 0039.scaffold00152 905478 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 905508 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 905516 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 905529 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 905532 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 905547 4 .... GAAA scaffold9962 ScafM INDEL 0039.scaffold00152 905548 3 ... TTG scaffold9962 ScafM SNP 0039.scaffold00152 905560 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 905642 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 906168 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 906216 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 906252 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 906259 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 906276 2 .. TG scaffold9962 ScafM SNP 0039.scaffold00152 906335 1 G A scaffold9962 Both SNP 0039.scaffold00152 906360 1 T C scaffold9962 Both SNP 0039.scaffold00152 906364 1 G C scaffold9962 Both SNP 0039.scaffold00152 906413 1 T A scaffold9962 Both SNP 0039.scaffold00152 906470 1 T C scaffold9962 Both SNP 0039.scaffold00152 906518 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 906543 1 A G - ReadM SNP 0039.scaffold00152 906589 1 G C - ReadM SNP 0039.scaffold00152 906646 1 A G - ReadM SNP 0039.scaffold00152 906683 1 A G - ReadM SNP 0039.scaffold00152 906750 1 C G - ReadM SNP 0039.scaffold00152 906757 1 C T - ReadM SNP 0039.scaffold00152 906808 1 G A - ReadM SNP 0039.scaffold00152 906894 1 A G - ReadM SNP 0039.scaffold00152 906900 1 C T - ReadM SNP 0039.scaffold00152 906969 1 A T - ReadM SNP 0039.scaffold00152 907020 1 C T - ReadM SNP 0039.scaffold00152 907037 1 C T - ReadM SNP 0039.scaffold00152 907079 1 A G - ReadM SNP 0039.scaffold00152 907116 1 C T - ReadM SNP 0039.scaffold00152 907224 1 A C - ReadM SNP 0039.scaffold00152 907508 1 A G - ReadM SNP 0039.scaffold00152 907534 1 C T - ReadM SNP 0039.scaffold00152 907668 1 G A - ReadM SNP 0039.scaffold00152 907674 1 T C - ReadM SNP 0039.scaffold00152 907731 1 T C - ReadM SNP 0039.scaffold00152 907837 1 A G - ReadM SNP 0039.scaffold00152 907849 1 C T - Both SNP 0039.scaffold00152 907940 1 T C scaffold9962 Both SNP 0039.scaffold00152 907945 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 907957 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 908049 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 908062 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 908082 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 908106 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 908117 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 908175 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 908179 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 908193 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 908535 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 908592 1 A C scaffold9962 ReadM SNP 0039.scaffold00152 908828 1 C T - ReadM SNP 0039.scaffold00152 908964 1 G A - ReadM SNP 0039.scaffold00152 909016 1 T C - ReadM SNP 0039.scaffold00152 909284 1 C T - ReadM SNP 0039.scaffold00152 909312 1 C T - ReadM INDEL 0039.scaffold00152 909406 1 T . - ReadM SNP 0039.scaffold00152 909500 1 T A - ReadM SNP 0039.scaffold00152 909517 1 A G - ReadM SNP 0039.scaffold00152 909592 1 C G - ScafM INDEL 0039.scaffold00152 909718 2 AA .. scaffold9962 Both SNP 0039.scaffold00152 909743 1 T C scaffold9962 Both SNP 0039.scaffold00152 909782 1 A G scaffold9962 Both SNP 0039.scaffold00152 909865 1 A G scaffold9962 Both SNP 0039.scaffold00152 909897 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 909941 3 ... TCG scaffold9962 ScafM SNP 0039.scaffold00152 909972 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 909979 3 ... TCA scaffold9962 ScafM SNP 0039.scaffold00152 909987 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 910003 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 910008 1 G A scaffold9962 Both SNP 0039.scaffold00152 910032 1 T C scaffold9962 Both SNP 0039.scaffold00152 910154 1 T A scaffold9962 Both SNP 0039.scaffold00152 910219 1 A C scaffold9962 Both SNP 0039.scaffold00152 910263 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 910287 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 910305 1 A G scaffold9962 ReadM SNP 0039.scaffold00152 910502 1 A G - Both SNP 0039.scaffold00152 910814 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 911167 2 .. TT scaffold9962 ScafM SNP 0039.scaffold00152 911308 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 911547 1 . T scaffold9962 ScafM SNP 0039.scaffold00152 911602 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 911852 1 G T - ScafM SNP 0039.scaffold00152 913632 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 913640 1 G C scaffold9962 Both INDEL 0039.scaffold00152 914075 3 ... ATG scaffold9962 Both SNP 0039.scaffold00152 914186 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 914292 1 . A scaffold9962 ScafM SNP 0039.scaffold00152 914364 2 TC CT scaffold9962 Both SNP 0039.scaffold00152 914408 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 914511 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 914539 5 TAATT ..... scaffold9962 ScafM SNP 0039.scaffold00152 914558 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 914561 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 914574 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 914576 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 914586 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 914814 1 G A scaffold9962 Both SNP 0039.scaffold00152 914847 1 G A scaffold9962 Both SNP 0039.scaffold00152 914870 1 A G scaffold9962 Both SNP 0039.scaffold00152 914877 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 915038 5 ....G CTATA scaffold9962 ScafM SNP 0039.scaffold00152 915091 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 915112 7 AATAGGT ....... scaffold9962 ScafM SNP 0039.scaffold00152 915180 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 915263 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 915284 1 C G scaffold9962 ScafM INDEL 0039.scaffold00152 915299 6 ...... GAAACA scaffold9962 ScafM INDEL 0039.scaffold00152 915300 1 . C scaffold9962 ScafM INDEL 0039.scaffold00152 915308 2 TT .. scaffold9962 ScafM SNP 0039.scaffold00152 915329 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 915378 9 TTTGGTTTG ......... scaffold9962 ReadM SNP 0039.scaffold00152 915546 1 A G - ReadM SNP 0039.scaffold00152 915631 1 C T - ReadM SNP 0039.scaffold00152 915683 1 C T - ReadM SNP 0039.scaffold00152 915936 1 C T - ReadM SNP 0039.scaffold00152 915978 1 T C - Both SNP 0039.scaffold00152 916060 1 T C scaffold9962 Both SNP 0039.scaffold00152 916066 1 A T scaffold9962 Both SNP 0039.scaffold00152 916077 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 916138 1 C T scaffold9962 Both SNP 0039.scaffold00152 916159 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 916192 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 916204 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 916235 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 916243 1 A C scaffold9962 Both SNP 0039.scaffold00152 916257 1 T C scaffold9962 Both SNP 0039.scaffold00152 916327 1 A T scaffold9962 Both SNP 0039.scaffold00152 916433 1 T C scaffold9962 Both SNP 0039.scaffold00152 916461 1 G A scaffold9962 Both SNP 0039.scaffold00152 916468 1 A G scaffold9962 Both SNP 0039.scaffold00152 916514 1 G A scaffold9962 Both SNP 0039.scaffold00152 916592 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 916674 1 C G scaffold9962 ScafM INDEL 0039.scaffold00152 916695 3 ... ATT scaffold9962 ScafM SNP 0039.scaffold00152 916706 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 916711 7 ....... TCATAAT scaffold9962 ScafM SNP 0039.scaffold00152 916723 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 916731 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 916733 1 C T scaffold9962 Both SNP 0039.scaffold00152 916906 1 C T scaffold9962 Both SNP 0039.scaffold00152 916931 1 T A scaffold9962 Both SNP 0039.scaffold00152 917034 1 G A scaffold9962 Both SNP 0039.scaffold00152 917044 1 G A scaffold9962 Both SNP 0039.scaffold00152 917056 1 G A scaffold9962 Both SNP 0039.scaffold00152 917111 1 A T scaffold9962 Both INDEL 0039.scaffold00152 917182 3 ... TTG scaffold9962 ScafM SNP 0039.scaffold00152 917237 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 917264 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 917267 1 C T scaffold9962 Both SNP 0039.scaffold00152 917280 1 T G scaffold9962 Both SNP 0039.scaffold00152 917362 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 917376 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 917385 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 917393 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 917395 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 917425 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 917435 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 917437 1 C A scaffold9962 ScafM INDEL 0039.scaffold00152 917442 2 TT .A scaffold9962 ScafM SNP 0039.scaffold00152 917465 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 917470 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 917476 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 917479 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 917482 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 917513 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 917515 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 917544 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 917563 32 ATCCAGGCTTGAAAATGGACTAACTTTTATTG ................................ scaffold9962 ScafM INDEL 0039.scaffold00152 917597 5 AAGGA ..... scaffold9962 ScafM SNP 0039.scaffold00152 917609 1 G A scaffold9962 Both SNP 0039.scaffold00152 917624 1 A T scaffold9962 Both SNP 0039.scaffold00152 917645 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 917663 1 C T scaffold9962 Both SNP 0039.scaffold00152 917737 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 917764 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 917766 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 917785 3 ... AAT scaffold9962 ScafM INDEL 0039.scaffold00152 917930 3 ... TAG scaffold9962 ScafM SNP 0039.scaffold00152 917949 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 917953 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 918024 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 918026 4 .... AGTA scaffold9962 ScafM INDEL 0039.scaffold00152 918030 10 .......... CAATTTTTTC scaffold9962 ScafM SNP 0039.scaffold00152 918037 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 918071 1 G . scaffold9962 Both SNP 0039.scaffold00152 918105 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 918189 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 918196 8 TCATAGAG ........ scaffold9962 ScafM SNP 0039.scaffold00152 918215 1 A C scaffold9962 Both INDEL 0039.scaffold00152 918237 1 . A scaffold9962 Both SNP 0039.scaffold00152 918320 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 918393 1 A G scaffold9962 ReadM SNP 0039.scaffold00152 918810 1 C A - ScafM SNP 0039.scaffold00152 919394 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 919481 1 A G - ReadM SNP 0039.scaffold00152 919688 1 G A - ReadM SNP 0039.scaffold00152 919776 1 G C - ReadM SNP 0039.scaffold00152 919783 1 A G - ScafM SNP 0039.scaffold00152 919922 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 919931 3 ATC ..G scaffold9962 ScafM SNP 0039.scaffold00152 919966 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 919998 3 ... ATA scaffold9962 ScafM SNP 0039.scaffold00152 920065 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 920083 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 920086 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 920099 2 AA .. scaffold9962 ScafM SNP 0039.scaffold00152 920115 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 920123 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 920137 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 920146 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 920313 41 TATATATAAACAAAAAAAATTGGATGAATGTTATACGTAAT ......................................... scaffold9962 ScafM SNP 0039.scaffold00152 920386 2 TG CA scaffold9962 ScafM SNP 0039.scaffold00152 920441 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 920466 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 920480 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 920492 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 920506 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 920511 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 920514 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 920521 1 A C scaffold9962 ScafM INDEL 0039.scaffold00152 920723 3 ... ATG scaffold9962 Both SNP 0039.scaffold00152 920860 1 C A scaffold9962 Both SNP 0039.scaffold00152 920876 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 920909 4 CATA .... scaffold9962 ScafM INDEL 0039.scaffold00152 921036 6 TTCCTA ...... scaffold9962 Both SNP 0039.scaffold00152 921096 1 A G scaffold9962 Both SNP 0039.scaffold00152 921137 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 921182 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 921193 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 921207 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 921218 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 921223 2 AC TT scaffold9962 Both SNP 0039.scaffold00152 921293 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 921311 1 A G - ReadM SNP 0039.scaffold00152 921459 1 G A - ReadM SNP 0039.scaffold00152 921509 1 A G - ReadM SNP 0039.scaffold00152 921528 1 C T - ReadM SNP 0039.scaffold00152 921618 1 T C - ReadM SNP 0039.scaffold00152 921627 1 T C - ReadM SNP 0039.scaffold00152 921650 1 G A - ReadM SNP 0039.scaffold00152 921749 1 G T - ScafM SNP 0039.scaffold00152 922229 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 922361 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 922367 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 922370 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 922396 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 922502 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 922514 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 922520 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 922537 1 G A scaffold9962 Both SNP 0039.scaffold00152 922956 1 T C scaffold9962 Both SNP 0039.scaffold00152 922997 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 923024 1 A G scaffold9962 Both SNP 0039.scaffold00152 923038 1 C T scaffold9962 ReadM INDEL 0039.scaffold00152 923088 1 A . - Both SNP 0039.scaffold00152 923143 1 C T scaffold9962 Both INDEL 0039.scaffold00152 923213 1 . A scaffold9962 Both SNP 0039.scaffold00152 923241 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 923293 2 AG GC scaffold9962 Both SNP 0039.scaffold00152 923361 1 A G scaffold9962 Both SNP 0039.scaffold00152 923403 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 923479 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 923484 3 ATA ... scaffold9962 ScafM SNP 0039.scaffold00152 923517 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 923521 1 A C scaffold9962 ScafM INDEL 0039.scaffold00152 923605 5 AGTAC ..... scaffold9962 ScafM SNP 0039.scaffold00152 923771 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 923797 2 AT .. scaffold9962 ScafM INDEL 0039.scaffold00152 923810 2 TA .. scaffold9962 Both SNP 0039.scaffold00152 924544 1 A G scaffold9962 Both SNP 0039.scaffold00152 924612 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 924735 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 931980 2 AA GG scaffold9962 ScafM SNP 0039.scaffold00152 932010 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 932098 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 932235 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 932267 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 932271 1 C G scaffold9962 Both SNP 0039.scaffold00152 932354 1 A G scaffold9962 Both INDEL 0039.scaffold00152 932407 1 . A scaffold9962 Both SNP 0039.scaffold00152 932442 1 T G scaffold9962 Both SNP 0039.scaffold00152 932452 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 932530 8 AGTATATA ........ scaffold9962 ScafM INDEL 0039.scaffold00152 932611 4 CAAA .... scaffold9962 ScafM INDEL 0039.scaffold00152 932616 3 TTC ... scaffold9962 ScafM SNP 0039.scaffold00152 932634 1 C G scaffold9962 ScafM INDEL 0039.scaffold00152 932643 7 ....... GTTACCC scaffold9962 ScafM SNP 0039.scaffold00152 932660 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 932684 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 932748 12 ............ TTATCTGTTTTT scaffold9962 Both SNP 0039.scaffold00152 932800 1 G A scaffold9962 Both SNP 0039.scaffold00152 932817 1 T G scaffold9962 Both SNP 0039.scaffold00152 932938 1 T G scaffold9962 Both SNP 0039.scaffold00152 932950 1 G A scaffold9962 Both SNP 0039.scaffold00152 933064 1 C A scaffold9962 Both SNP 0039.scaffold00152 933140 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 933164 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 933177 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 933183 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 933193 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 933200 1 G A scaffold9962 ReadM SNP 0039.scaffold00152 933307 1 A G - ReadM SNP 0039.scaffold00152 933323 1 C T - ReadM SNP 0039.scaffold00152 933329 1 G A - ReadM SNP 0039.scaffold00152 933406 1 A T - ReadM SNP 0039.scaffold00152 933423 1 C T - ReadM SNP 0039.scaffold00152 933465 1 C A - ReadM SNP 0039.scaffold00152 933505 1 T C - ReadM SNP 0039.scaffold00152 933533 1 G A - ReadM SNP 0039.scaffold00152 933608 1 G C - Both SNP 0039.scaffold00152 933693 1 T C scaffold9962 ReadM SNP 0039.scaffold00152 933735 1 A G - ScafM INDEL 0039.scaffold00152 934731 1 . G scaffold9962 ScafM SNP 0039.scaffold00152 934758 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 934781 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 934797 1 C T scaffold9962 Both INDEL 0039.scaffold00152 934833 1 A . scaffold9962 ScafM SNP 0039.scaffold00152 934855 1 A T scaffold9962 Both SNP 0039.scaffold00152 934980 1 C T scaffold9962 Both SNP 0039.scaffold00152 934998 1 A G scaffold9962 Both INDEL 0039.scaffold00152 935086 1 A . scaffold9962 ReadM SNP 0039.scaffold00152 935352 1 T C - ScafM INDEL 0039.scaffold00152 935455 14 ATTATAAATAAATC .............. scaffold9962 Both SNP 0039.scaffold00152 935546 1 C G scaffold9962 Both SNP 0039.scaffold00152 935730 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 935884 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 935990 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 936027 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 936039 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 936491 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 936543 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 936551 2 TG CA scaffold9962 ScafM SNP 0039.scaffold00152 936558 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 936560 2 TC AT scaffold9962 ScafM INDEL 0039.scaffold00152 936566 2 CT .A scaffold9962 ScafM SNP 0039.scaffold00152 936578 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 936580 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 936604 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 936628 2 TA AT scaffold9962 ScafM SNP 0039.scaffold00152 936765 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 936768 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 936775 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 936847 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 936879 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 937244 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 937246 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 937248 2 CC .. scaffold9962 ScafM SNP 0039.scaffold00152 937252 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 937256 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 937263 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 937267 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 937279 2 CG TA scaffold9962 ScafM SNP 0039.scaffold00152 937287 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 937305 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 937307 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 937309 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 937320 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 937397 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 938111 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 938127 4 CCCG .... scaffold9962 ScafM SNP 0039.scaffold00152 938134 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 938170 3 AAA ... scaffold9962 ScafM SNP 0039.scaffold00152 938174 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 938353 4 .... TCTA scaffold9962 ScafM INDEL 0039.scaffold00152 938358 2 .. CG scaffold9962 ScafM SNP 0039.scaffold00152 938398 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 938416 1 C G scaffold9962 ScafM INDEL 0039.scaffold00152 938430 2 .. TA scaffold9962 ScafM SNP 0039.scaffold00152 938436 4 CAGA TTAC scaffold9962 ScafM SNP 0039.scaffold00152 938441 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 938443 1 A . scaffold9962 ScafM INDEL 0039.scaffold00152 938464 12 TTTTTTTTTTGA ............ scaffold9962 ScafM INDEL 0039.scaffold00152 938478 1 A . scaffold9962 ScafM INDEL 0039.scaffold00152 938480 9 AAACCAAGA ......... scaffold9962 ScafM SNP 0039.scaffold00152 938503 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 938513 1 G A scaffold9962 Both SNP 0039.scaffold00152 938648 1 A G scaffold9962 Both SNP 0039.scaffold00152 938687 1 T C scaffold9962 Both SNP 0039.scaffold00152 938744 1 C G scaffold9962 Both SNP 0039.scaffold00152 938756 1 A G scaffold9962 Both SNP 0039.scaffold00152 938759 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 938927 7 ....... AATATGA scaffold9962 ScafM INDEL 0039.scaffold00152 938962 45 GTTCAAGATTAGTACATTAATTTTTATTTAAGAGAAAAACTTTTA ............................................. scaffold9962 ScafM INDEL 0039.scaffold00152 939010 9 TTAGGTTTG ......... scaffold9962 ScafM SNP 0039.scaffold00152 939041 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 939050 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 939719 1 T C scaffold9962 Both SNP 0039.scaffold00152 939804 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 939820 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 939941 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 939991 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 939998 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 939999 3 ... GGT scaffold9962 ScafM SNP 0039.scaffold00152 940003 3 GTT ACA scaffold9962 ScafM SNP 0039.scaffold00152 940007 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 940008 4 .... CCAT scaffold9962 ScafM SNP 0039.scaffold00152 940056 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 940065 2 CA TC scaffold9962 ScafM SNP 0039.scaffold00152 940096 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 940122 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 940128 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 940143 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 940148 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 940158 1 T . scaffold9962 ScafM INDEL 0039.scaffold00152 940186 1 . C scaffold9962 ScafM SNP 0039.scaffold00152 940194 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 940207 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 940216 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 940221 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 940239 5 TTTTG ..... scaffold9962 ScafM SNP 0039.scaffold00152 940267 1 C A scaffold9962 ScafM INDEL 0039.scaffold00152 940273 8 ........ AACATTTT scaffold9962 ScafM SNP 0039.scaffold00152 940286 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 940291 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 940294 3 GCT AAA scaffold9962 ScafM SNP 0039.scaffold00152 940299 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 940317 5 TCCTT ..... scaffold9962 ScafM INDEL 0039.scaffold00152 940386 2 TG .. scaffold9962 ScafM SNP 0039.scaffold00152 940583 1 A T scaffold9962 Both SNP 0039.scaffold00152 940625 1 A T scaffold9962 Both SNP 0039.scaffold00152 940728 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 940774 1 . T scaffold9962 ReadM SNP 0039.scaffold00152 940775 1 C T - ReadM SNP 0039.scaffold00152 940802 1 G A - ReadM INDEL 0039.scaffold00152 940832 1 . T - Both INDEL 0039.scaffold00152 941089 1 . T scaffold9962 Both SNP 0039.scaffold00152 941149 1 T A scaffold9962 Both SNP 0039.scaffold00152 941268 1 A T scaffold9962 ReadM SNP 0039.scaffold00152 941438 1 G C - ReadM SNP 0039.scaffold00152 941470 1 G A - ReadM SNP 0039.scaffold00152 941524 1 G A - Both SNP 0039.scaffold00152 941548 1 A G scaffold9962 Both SNP 0039.scaffold00152 941657 1 T A scaffold9962 Both SNP 0039.scaffold00152 941666 1 G A scaffold9962 Both SNP 0039.scaffold00152 941940 1 A G scaffold9962 Both SNP 0039.scaffold00152 942032 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 942089 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 942092 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 942095 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 942101 1 T C scaffold9962 Both SNP 0039.scaffold00152 942128 1 T A scaffold9962 Both SNP 0039.scaffold00152 942134 1 T A scaffold9962 Both SNP 0039.scaffold00152 942167 1 T C scaffold9962 Both SNP 0039.scaffold00152 942299 1 G T scaffold9962 Both SNP 0039.scaffold00152 942434 1 A C scaffold9962 Both SNP 0039.scaffold00152 942476 1 C G scaffold9962 Both SNP 0039.scaffold00152 942484 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 942512 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 942539 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 942545 1 T G scaffold9962 ScafM INDEL 0039.scaffold00152 942550 7 GCAGCAA ....... scaffold9962 Both SNP 0039.scaffold00152 942717 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 942821 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 943186 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 943373 8 ........ CTTATGCA scaffold9962 ScafM SNP 0039.scaffold00152 943376 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 943394 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 943402 4 ACTA .... scaffold9962 ScafM INDEL 0039.scaffold00152 943407 4 TATA .... scaffold9962 ScafM INDEL 0039.scaffold00152 943419 1 A . scaffold9962 ScafM SNP 0039.scaffold00152 943431 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 943474 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 943491 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 943516 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 943523 2 TG CA scaffold9962 ScafM SNP 0039.scaffold00152 943527 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 943538 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 943541 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 943548 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 943553 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 943558 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 943560 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 943570 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 943575 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 943592 2 AC GA scaffold9962 ScafM SNP 0039.scaffold00152 943602 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 943628 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 943629 2 .. AG scaffold9962 ScafM INDEL 0039.scaffold00152 943631 1 . C scaffold9962 ScafM INDEL 0039.scaffold00152 943692 2 CA .. scaffold9962 ScafM SNP 0039.scaffold00152 945028 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 945118 13 CTTTAGGGGCTAC ............. scaffold9962 ScafM INDEL 0039.scaffold00152 945159 2 AA .. scaffold9962 ScafM SNP 0039.scaffold00152 945182 2 TA AT scaffold9962 ScafM SNP 0039.scaffold00152 945197 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 945241 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 945246 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 945274 19 ................... TATACATAGTATATACTAA scaffold9962 ScafM INDEL 0039.scaffold00152 945320 3 ... ATA scaffold9962 ScafM INDEL 0039.scaffold00152 945405 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 945407 2 TT AA scaffold9962 ScafM SNP 0039.scaffold00152 945456 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 945522 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 945610 1 G C scaffold9962 ReadM SNP 0039.scaffold00152 953734 1 G A - ReadM SNP 0039.scaffold00152 953767 1 C T - ScafM INDEL 0039.scaffold00152 954371 7 GCCTGTT ....... scaffold9962 ScafM INDEL 0039.scaffold00152 954424 1 . G scaffold9962 ScafM SNP 0039.scaffold00152 955159 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955266 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955269 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 955283 1 C T scaffold9962 ScafM INDEL 0039.scaffold00152 955301 2 CC .. scaffold9962 ScafM SNP 0039.scaffold00152 955313 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 955341 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955387 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955410 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955429 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 955438 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955448 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 955450 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955472 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955475 1 G T scaffold9962 ScafM INDEL 0039.scaffold00152 955482 1 . A scaffold9962 ScafM INDEL 0039.scaffold00152 955483 1 . A scaffold9962 ScafM SNP 0039.scaffold00152 955503 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 955548 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955579 1 A T scaffold9962 ScafM INDEL 0039.scaffold00152 955602 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 955614 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 955648 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 955684 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 955689 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955720 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955743 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 955760 1 T A scaffold9962 ScafM INDEL 0039.scaffold00152 955769 1 T . scaffold9962 ScafM SNP 0039.scaffold00152 955775 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 955788 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 955799 5 TGATT ..... scaffold9962 ScafM INDEL 0039.scaffold00152 955805 3 ATG ... scaffold9962 ScafM INDEL 0039.scaffold00152 955809 1 C . scaffold9962 Both SNP 0039.scaffold00152 955867 1 T G scaffold9962 Both SNP 0039.scaffold00152 955909 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 955921 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 955958 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 956006 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 956022 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 956034 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 956047 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 956087 1 A C scaffold9962 ScafM INDEL 0039.scaffold00152 956093 5 TTTAA ..... scaffold9962 ScafM SNP 0039.scaffold00152 956107 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 956113 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 956121 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 956124 2 TA CG scaffold9962 ScafM SNP 0039.scaffold00152 956140 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 956162 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 956169 1 G C scaffold9962 ScafM SNP 0039.scaffold00152 956207 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 956222 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 956243 1 G T scaffold9962 ScafM SNP 0039.scaffold00152 956249 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 956251 3 ATT ... scaffold9962 ScafM SNP 0039.scaffold00152 956349 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 956353 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 956390 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 956401 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 956419 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 956429 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 956477 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 957017 2 TA CC scaffold9962 ScafM SNP 0039.scaffold00152 957055 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 957061 3 ... TAA scaffold9962 ScafM SNP 0039.scaffold00152 957076 1 C G scaffold9962 ScafM SNP 0039.scaffold00152 957083 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 957106 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 957415 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 957426 3 TTA ... scaffold9962 ScafM SNP 0039.scaffold00152 957436 2 AA TT scaffold9962 ScafM SNP 0039.scaffold00152 957450 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 957469 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 957502 1 A G scaffold9962 ScafM INDEL 0039.scaffold00152 957532 4 .... AACA scaffold9962 ScafM INDEL 0039.scaffold00152 957535 1 . T scaffold9962 ScafM SNP 0039.scaffold00152 957567 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 957589 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 957624 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 957641 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 957648 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 957669 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 957674 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 957702 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 957718 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 957725 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 957740 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 957752 1 A T scaffold9962 ScafM SNP 0039.scaffold00152 957758 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 958616 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 959275 1 C T scaffold32950 ScafM SNP 0039.scaffold00152 960156 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 960192 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 960196 5 GGTAC ..... scaffold9962 ScafM SNP 0039.scaffold00152 960208 1 G A scaffold9962 ScafM INDEL 0039.scaffold00152 960222 2 TA .. scaffold9962 ScafM SNP 0039.scaffold00152 960246 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 960275 2 GG AA scaffold9962 ScafM SNP 0039.scaffold00152 960320 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 960344 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 960349 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 960366 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 960413 2 CA TG scaffold9962 ScafM SNP 0039.scaffold00152 960449 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 960494 1 T G scaffold9962 ScafM SNP 0039.scaffold00152 960497 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 960551 1 C A scaffold9962 ScafM SNP 0039.scaffold00152 960598 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 960609 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 960624 1 T C scaffold9962 ScafM SNP 0039.scaffold00152 960633 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 960636 1 T C scaffold9962 ScafM INDEL 0039.scaffold00152 960645 2 CC .. scaffold9962 ScafM INDEL 0039.scaffold00152 960649 2 CG .. scaffold9962 ScafM SNP 0039.scaffold00152 960675 1 T A scaffold9962 ScafM SNP 0039.scaffold00152 960702 1 G A scaffold9962 ScafM SNP 0039.scaffold00152 960706 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 960773 1 C T scaffold9962 ScafM SNP 0039.scaffold00152 960782 1 A G scaffold9962 ScafM SNP 0039.scaffold00152 960806 1 A C scaffold9962 ScafM SNP 0039.scaffold00152 960905 1 T G C19749738 ScafM SNP 0039.scaffold00152 960914 2 TT AA C19749738 ScafM SNP 0039.scaffold00152 960920 1 T C C19749738 ScafM SNP 0039.scaffold00152 960930 1 T G C19749738 ScafM SNP 0039.scaffold00152 960946 1 T C C19749738 ScafM SNP 0039.scaffold00152 960961 1 A G C19749738 ScafM SNP 0039.scaffold00152 960977 1 A C C19749738 ScafM SNP 0039.scaffold00152 961036 1 T A C19749738 ScafM SNP 0039.scaffold00152 961050 1 A G C19749738 ScafM SNP 0039.scaffold00152 961063 1 A G C19749738 ScafM SNP 0039.scaffold00152 961088 2 GA TT C19749738 ScafM SNP 0039.scaffold00152 961094 1 G T C19749738 ScafM SNP 0039.scaffold00152 961102 1 T C C19749738 ScafM INDEL 0039.scaffold00152 961108 1 . C C19749738 ScafM SNP 0039.scaffold00152 961117 1 C T C19749738 ScafM SNP 0039.scaffold00152 961127 1 C A C19749738 ScafM SNP 0039.scaffold00152 961141 1 A G C19749738 ScafM SNP 0039.scaffold00152 961153 1 T C C19749738 ScafM SNP 0039.scaffold00152 961155 1 A T C19749738 ScafM SNP 0039.scaffold00152 961168 1 G T C19749738 ScafM SNP 0039.scaffold00152 961177 1 T G C19749738 ScafM SNP 0039.scaffold00152 961189 1 C T C19749738 ScafM SNP 0039.scaffold00152 961196 1 C A C19749738 ScafM SNP 0039.scaffold00152 961224 1 A G C19749738 ScafM SNP 0039.scaffold00152 961275 1 G A C19749738 ScafM SNP 0039.scaffold00152 961281 1 G A C19749738 ScafM SNP 0039.scaffold00152 961343 2 TG CT C19749738 ScafM SNP 0039.scaffold00152 961391 1 A G C19749738 Both SNP 0039.scaffold00152 961457 1 T G C19749738 ScafM INDEL 0039.scaffold00152 961492 6 ...... TTAATT C19749738 ScafM SNP 0039.scaffold00152 961500 1 G A C19749738 ScafM SNP 0039.scaffold00152 961515 1 T G C19749738 ScafM SNP 0039.scaffold00152 961554 1 A C C19749738 ScafM SNP 0039.scaffold00152 961584 1 T C C19749738 ScafM SNP 0039.scaffold00152 961607 1 G A C19749738 ScafM SNP 0039.scaffold00152 961659 1 A G C19749738 ScafM SNP 0039.scaffold00152 963020 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963046 1 G A scaffold154 ScafM SNP 0039.scaffold00152 963062 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963077 1 G A scaffold154 ScafM SNP 0039.scaffold00152 963080 1 C G scaffold154 ScafM SNP 0039.scaffold00152 963101 1 G C scaffold154 ScafM SNP 0039.scaffold00152 963107 1 T C scaffold154 ScafM SNP 0039.scaffold00152 963131 1 C G scaffold154 ScafM SNP 0039.scaffold00152 963138 1 G A scaffold154 ScafM SNP 0039.scaffold00152 963143 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963152 1 G A scaffold154 ScafM SNP 0039.scaffold00152 963168 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963170 1 T G scaffold154 ScafM SNP 0039.scaffold00152 963202 3 ACC GTT scaffold154 ScafM SNP 0039.scaffold00152 963212 1 C G scaffold154 ScafM SNP 0039.scaffold00152 963216 1 G A scaffold154 ScafM SNP 0039.scaffold00152 963226 1 T G scaffold154 ScafM SNP 0039.scaffold00152 963236 2 CA TG scaffold154 ScafM INDEL 0039.scaffold00152 963240 2 .. AT scaffold154 ScafM SNP 0039.scaffold00152 963264 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963300 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963306 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963325 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963327 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963330 1 C G scaffold154 ScafM SNP 0039.scaffold00152 963338 1 A C scaffold154 ScafM SNP 0039.scaffold00152 963360 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963461 1 G C scaffold154 ScafM SNP 0039.scaffold00152 963476 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963490 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963492 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963508 1 A G scaffold154 ScafM INDEL 0039.scaffold00152 963522 1 . T scaffold154 ScafM INDEL 0039.scaffold00152 963523 2 .. TT scaffold154 ScafM SNP 0039.scaffold00152 963558 1 A T scaffold154 ScafM SNP 0039.scaffold00152 963579 1 T A scaffold154 ScafM SNP 0039.scaffold00152 963597 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963599 1 A G scaffold154 ScafM SNP 0039.scaffold00152 963632 1 C T scaffold154 ScafM SNP 0039.scaffold00152 963651 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964626 1 A G scaffold154 ScafM SNP 0039.scaffold00152 964629 1 T G scaffold154 ScafM SNP 0039.scaffold00152 964643 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964674 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964686 1 A G scaffold154 ScafM SNP 0039.scaffold00152 964697 1 A T scaffold154 ScafM SNP 0039.scaffold00152 964703 1 T G scaffold154 ScafM SNP 0039.scaffold00152 964733 1 T A scaffold154 ScafM SNP 0039.scaffold00152 964735 2 CT TG scaffold154 ScafM SNP 0039.scaffold00152 964758 2 AA TG scaffold154 ScafM SNP 0039.scaffold00152 964767 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964802 1 G A scaffold154 ScafM SNP 0039.scaffold00152 964820 1 A G scaffold154 ScafM SNP 0039.scaffold00152 964849 1 G C scaffold154 ScafM SNP 0039.scaffold00152 964851 2 GT AG scaffold154 ScafM SNP 0039.scaffold00152 964903 1 A G scaffold154 ScafM SNP 0039.scaffold00152 964916 1 C A scaffold154 ScafM SNP 0039.scaffold00152 964928 1 T C scaffold154 ScafM SNP 0039.scaffold00152 964931 1 G A scaffold154 ScafM SNP 0039.scaffold00152 964949 1 G A scaffold154 ScafM SNP 0039.scaffold00152 964957 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964969 1 T C scaffold154 ScafM SNP 0039.scaffold00152 964974 1 C T scaffold154 ScafM SNP 0039.scaffold00152 964980 2 CT TC scaffold154 ScafM SNP 0039.scaffold00152 964985 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965001 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965016 1 T C scaffold154 ScafM SNP 0039.scaffold00152 965024 1 A G scaffold154 ScafM SNP 0039.scaffold00152 965045 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965061 1 A G scaffold154 ScafM SNP 0039.scaffold00152 965072 1 T C scaffold154 ScafM SNP 0039.scaffold00152 965080 1 T A scaffold154 Both SNP 0039.scaffold00152 965124 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965171 1 C T scaffold154 ScafM SNP 0039.scaffold00152 965178 1 T C scaffold154 ScafM INDEL 0039.scaffold00152 965196 24 ........................ CAGAAAAAATAGATATTAAGAATT scaffold154 ScafM INDEL 0039.scaffold00152 965197 3 ..C TGT scaffold154 ScafM SNP 0039.scaffold00152 965238 1 A T scaffold154 ScafM SNP 0039.scaffold00152 965252 1 A C scaffold154 ScafM INDEL 0039.scaffold00152 965254 1 . C scaffold154 ScafM SNP 0039.scaffold00152 965266 1 C A scaffold154 ScafM SNP 0039.scaffold00152 965277 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965285 1 T A scaffold154 ScafM SNP 0039.scaffold00152 965291 1 A G scaffold154 ScafM INDEL 0039.scaffold00152 965304 1 T . scaffold154 ScafM INDEL 0039.scaffold00152 965345 2 AT .C scaffold154 ScafM SNP 0039.scaffold00152 965355 1 C A scaffold154 ScafM INDEL 0039.scaffold00152 965373 2 AA .. scaffold154 ScafM INDEL 0039.scaffold00152 965376 2 AA .. scaffold154 ScafM INDEL 0039.scaffold00152 965383 6 TTTTTC ...... scaffold154 ScafM SNP 0039.scaffold00152 965404 1 A T scaffold154 ScafM INDEL 0039.scaffold00152 965457 7 ....... ATTTCCA scaffold154 ScafM SNP 0039.scaffold00152 965482 1 G A scaffold154 ScafM SNP 0039.scaffold00152 965484 1 T A scaffold154 ScafM INDEL 0039.scaffold00152 965512 5 ..... AGACA scaffold154 Both SNP 0039.scaffold00152 965585 1 C T scaffold154 Both SNP 0039.scaffold00152 965589 1 T C scaffold154 Both SNP 0039.scaffold00152 965617 1 A G scaffold154 ScafM SNP 0039.scaffold00152 965723 2 TC AT scaffold154 ScafM SNP 0039.scaffold00152 965772 1 T G scaffold154 Both SNP 0039.scaffold00152 965800 1 G T scaffold154 Both INDEL 0039.scaffold00152 965840 1 . T scaffold154 ReadM SNP 0039.scaffold00152 965874 1 C A - Both SNP 0039.scaffold00152 965908 1 T G scaffold154 Both SNP 0039.scaffold00152 965936 1 C T scaffold154 ScafM SNP 0039.scaffold00152 965993 1 C T scaffold154 Both SNP 0039.scaffold00152 966001 1 T G scaffold154 ScafM SNP 0039.scaffold00152 966027 1 A C scaffold154 Both SNP 0039.scaffold00152 966091 1 A T scaffold154 Both SNP 0039.scaffold00152 966141 1 A C scaffold154 ScafM SNP 0039.scaffold00152 966159 1 A G scaffold154 ScafM SNP 0039.scaffold00152 966178 1 T C scaffold154 ScafM SNP 0039.scaffold00152 966182 1 G C scaffold154 ScafM SNP 0039.scaffold00152 966186 1 A T scaffold154 ScafM SNP 0039.scaffold00152 966202 1 A T scaffold154 ScafM SNP 0039.scaffold00152 966215 1 A G scaffold154 ScafM SNP 0039.scaffold00152 966231 1 G A scaffold154 ScafM SNP 0039.scaffold00152 966244 1 A G scaffold154 ScafM SNP 0039.scaffold00152 966254 1 A G scaffold154 ScafM SNP 0039.scaffold00152 966258 1 C G scaffold154 ScafM SNP 0039.scaffold00152 966286 1 C T scaffold154 ScafM SNP 0039.scaffold00152 966320 1 C T scaffold154 ScafM SNP 0039.scaffold00152 966328 1 G T scaffold154 Both SNP 0039.scaffold00152 966340 1 C A scaffold154 Both SNP 0039.scaffold00152 966351 1 A G scaffold154 Both SNP 0039.scaffold00152 966441 1 G A scaffold154 Both SNP 0039.scaffold00152 966448 1 T A scaffold154 Both SNP 0039.scaffold00152 966465 1 G T scaffold154 ScafM INDEL 0039.scaffold00152 966486 4 TGAG .... scaffold154 Both SNP 0039.scaffold00152 966515 1 G A scaffold154 Both INDEL 0039.scaffold00152 966602 1 A . scaffold154 Both SNP 0039.scaffold00152 966613 1 C T scaffold154 Both SNP 0039.scaffold00152 966719 1 A G scaffold154 Both SNP 0039.scaffold00152 966728 1 G C scaffold154 Both SNP 0039.scaffold00152 966792 1 C T scaffold154 Both SNP 0039.scaffold00152 967061 1 C T scaffold154 ScafM INDEL 0039.scaffold00152 967087 1 T . scaffold154 Both SNP 0039.scaffold00152 967204 1 G C scaffold154 Both SNP 0039.scaffold00152 967389 1 C G scaffold154 Both SNP 0039.scaffold00152 967517 1 T A scaffold154 Both SNP 0039.scaffold00152 967589 1 G A scaffold154 Both SNP 0039.scaffold00152 967648 1 A C scaffold154 Both SNP 0039.scaffold00152 967820 1 T C scaffold154 Both SNP 0039.scaffold00152 967941 1 C A scaffold154 ScafM SNP 0039.scaffold00152 967959 2 TG GT scaffold154 ReadM SNP 0039.scaffold00152 968087 1 T C - ReadM SNP 0039.scaffold00152 968099 1 T C - Both INDEL 0039.scaffold00152 968214 2 .. AT scaffold154 Both SNP 0039.scaffold00152 968237 1 A T scaffold154 Both SNP 0039.scaffold00152 968409 1 G A scaffold154 Both SNP 0039.scaffold00152 968415 1 A C scaffold154 Both SNP 0039.scaffold00152 968421 1 G A scaffold154 Both SNP 0039.scaffold00152 968485 1 T C scaffold154 Both SNP 0039.scaffold00152 968644 1 A G scaffold154 Both SNP 0039.scaffold00152 968665 1 C T scaffold154 Both SNP 0039.scaffold00152 968702 1 C T scaffold154 ReadM INDEL 0039.scaffold00152 968819 1 . T - ScafM INDEL 0039.scaffold00152 968819 2 .C TT scaffold154 Both SNP 0039.scaffold00152 968867 1 A T scaffold154 Both SNP 0039.scaffold00152 968878 1 T C scaffold154 Both SNP 0039.scaffold00152 968959 1 C G scaffold154 Both SNP 0039.scaffold00152 969040 1 T C scaffold154 Both SNP 0039.scaffold00152 969043 1 C T scaffold154 Both SNP 0039.scaffold00152 969105 1 A G scaffold154 Both SNP 0039.scaffold00152 969115 1 C T scaffold154 ScafM SNP 0039.scaffold00152 969261 1 G T scaffold154 ScafM SNP 0039.scaffold00152 969264 1 A G scaffold154 Both SNP 0039.scaffold00152 969277 1 T C scaffold154 ScafM SNP 0039.scaffold00152 969334 1 A G scaffold154 ScafM SNP 0039.scaffold00152 969340 1 C T scaffold154 ScafM SNP 0039.scaffold00152 969350 1 G C scaffold154 ScafM SNP 0039.scaffold00152 969371 2 TC GA scaffold154 ScafM SNP 0039.scaffold00152 969395 1 C T scaffold154 ScafM SNP 0039.scaffold00152 969417 1 T C scaffold154 ScafM SNP 0039.scaffold00152 969433 1 C T scaffold154 Both SNP 0039.scaffold00152 969454 1 T C scaffold154 Both SNP 0039.scaffold00152 969499 1 A C scaffold154 ScafM SNP 0039.scaffold00152 969504 1 G A scaffold154 Both SNP 0039.scaffold00152 969626 1 A G scaffold154 Both SNP 0039.scaffold00152 969652 1 C T scaffold154 Both SNP 0039.scaffold00152 969870 1 T G scaffold154 Both SNP 0039.scaffold00152 969876 1 G T scaffold154 Both SNP 0039.scaffold00152 969895 1 C T scaffold154 Both SNP 0039.scaffold00152 970011 1 A T scaffold154 Both SNP 0039.scaffold00152 970040 1 T C scaffold154 Both SNP 0039.scaffold00152 970055 1 C G scaffold154 ScafM INDEL 0039.scaffold00152 970071 22 AACAGCAATTTCCCCCTGACTC ...................... scaffold154 Both SNP 0039.scaffold00152 970158 1 C T scaffold154 ScafM INDEL 0039.scaffold00152 970198 5 CTTCC ..... scaffold154 Both SNP 0039.scaffold00152 970237 1 T C scaffold154 Both SNP 0039.scaffold00152 970320 1 G T scaffold154 Both SNP 0039.scaffold00152 970426 1 C A scaffold154 ReadM SNP 0039.scaffold00152 970487 1 C T - ReadM SNP 0039.scaffold00152 970495 1 A T - ReadM SNP 0039.scaffold00152 970568 1 C T - ReadM SNP 0039.scaffold00152 970647 1 A G - ReadM SNP 0039.scaffold00152 970652 1 T C - ReadM INDEL 0039.scaffold00152 970661 1 . A - Both SNP 0039.scaffold00152 970729 1 G A scaffold154 ReadM SNP 0039.scaffold00152 970780 1 A T - ReadM SNP 0039.scaffold00152 970795 1 C G - ReadM SNP 0039.scaffold00152 970876 1 C T - ReadM SNP 0039.scaffold00152 970886 1 A G - ScafM INDEL 0039.scaffold00152 970966 4 TGAA .... scaffold154 Both SNP 0039.scaffold00152 970981 1 T G scaffold154 Both SNP 0039.scaffold00152 971093 1 G C scaffold154 Both INDEL 0039.scaffold00152 971141 1 T . scaffold154 ScafM SNP 0039.scaffold00152 971145 1 T C scaffold154 Both SNP 0039.scaffold00152 971236 1 T C scaffold154 Both SNP 0039.scaffold00152 971290 1 T C scaffold154 ScafM SNP 0039.scaffold00152 971378 1 T C scaffold154 ScafM SNP 0039.scaffold00152 971564 1 T G scaffold154 ScafM SNP 0039.scaffold00152 972175 1 A G scaffold2527 ScafM SNP 0039.scaffold00152 972180 1 T C scaffold2527 ScafM INDEL 0039.scaffold00152 972185 1 C . scaffold2527 ScafM SNP 0039.scaffold00152 972198 1 T C scaffold2527 ScafM SNP 0039.scaffold00152 972221 1 G T scaffold2527 ScafM SNP 0039.scaffold00152 972242 1 T G scaffold2527 ScafM SNP 0039.scaffold00152 972254 1 C T scaffold2527 ScafM SNP 0039.scaffold00152 972291 3 GGG CAA scaffold2527 ScafM SNP 0039.scaffold00152 972319 1 G A scaffold2527 ScafM SNP 0039.scaffold00152 972326 1 A G scaffold2527 ScafM SNP 0039.scaffold00152 972333 1 G A scaffold2527 ScafM SNP 0039.scaffold00152 972362 2 CA TG scaffold2527 ScafM INDEL 0039.scaffold00152 972375 19 ................... GTGTTTTAGGGTGCAGTGA scaffold2527 ScafM INDEL 0039.scaffold00152 972376 2 .. GG scaffold2527 ScafM SNP 0039.scaffold00152 972391 1 G T scaffold2527 ScafM SNP 0039.scaffold00152 972396 1 A G scaffold2527 ScafM INDEL 0039.scaffold00152 972408 1 . G scaffold2527 ScafM SNP 0039.scaffold00152 972422 1 G T scaffold2527 ScafM SNP 0039.scaffold00152 972428 1 C G scaffold2527 ScafM SNP 0039.scaffold00152 972443 1 T C scaffold2527 ScafM SNP 0039.scaffold00152 972449 1 A G scaffold2527 ScafM SNP 0039.scaffold00152 972459 1 A G scaffold2527 ScafM SNP 0039.scaffold00152 973809 1 T C scaffold154 ScafM SNP 0039.scaffold00152 973840 1 G T scaffold154 ScafM SNP 0039.scaffold00152 973846 2 AG GA scaffold154 ScafM SNP 0039.scaffold00152 973919 1 G T scaffold154 ScafM SNP 0039.scaffold00152 974217 1 C T scaffold154 ScafM SNP 0039.scaffold00152 974220 1 A G scaffold154 ScafM SNP 0039.scaffold00152 974225 1 C G scaffold154 ScafM SNP 0039.scaffold00152 974229 1 A G scaffold154 ScafM SNP 0039.scaffold00152 974417 1 C A scaffold154 ScafM SNP 0039.scaffold00152 974426 1 A T scaffold154 ScafM SNP 0039.scaffold00152 974433 1 G T scaffold154 ScafM SNP 0039.scaffold00152 974442 2 CA TG scaffold154 ScafM SNP 0039.scaffold00152 974486 1 T C scaffold154 ScafM SNP 0039.scaffold00152 974504 1 T A scaffold154 ScafM SNP 0039.scaffold00152 974520 1 T A scaffold154 ScafM SNP 0039.scaffold00152 974524 1 G C scaffold154 ScafM SNP 0039.scaffold00152 974553 1 T A scaffold154 ScafM SNP 0039.scaffold00152 974626 1 T C scaffold154 ScafM SNP 0039.scaffold00152 974628 1 G A scaffold154 ScafM SNP 0039.scaffold00152 974649 1 T C scaffold154 ScafM INDEL 0039.scaffold00152 974663 1 . G scaffold154 ScafM SNP 0039.scaffold00152 974696 1 G T scaffold154 ScafM SNP 0039.scaffold00152 974718 1 A T scaffold154 ScafM SNP 0039.scaffold00152 974720 1 G A scaffold154 ScafM SNP 0039.scaffold00152 974723 1 A G scaffold154 ScafM SNP 0039.scaffold00152 974725 1 A G scaffold154 ScafM SNP 0039.scaffold00152 974736 1 C A scaffold154 ScafM SNP 0039.scaffold00152 974751 1 C T scaffold154 ScafM SNP 0039.scaffold00152 974772 1 G A scaffold154 ScafM SNP 0039.scaffold00152 974774 1 C T scaffold154 ScafM SNP 0039.scaffold00152 974783 1 C T scaffold154 Both SNP 0039.scaffold00152 974969 1 A C scaffold154 ScafM SNP 0039.scaffold00152 975015 1 T C scaffold154 ScafM INDEL 0039.scaffold00152 975019 1 . A scaffold154 ScafM SNP 0039.scaffold00152 975026 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975031 1 C G scaffold154 ScafM INDEL 0039.scaffold00152 975053 11 TTAATCAATTT ........... scaffold154 ScafM INDEL 0039.scaffold00152 975065 3 AGA ... scaffold154 ScafM INDEL 0039.scaffold00152 975072 3 CCC ... scaffold154 ScafM INDEL 0039.scaffold00152 975078 3 AAC ... scaffold154 ScafM INDEL 0039.scaffold00152 975087 1 C . scaffold154 ScafM SNP 0039.scaffold00152 975092 3 CGC TAT scaffold154 Both INDEL 0039.scaffold00152 975114 1 . T scaffold154 Both SNP 0039.scaffold00152 975123 1 A C scaffold154 ReadM SNP 0039.scaffold00152 975222 1 C G - ScafM SNP 0039.scaffold00152 975318 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975353 1 C T scaffold154 ScafM SNP 0039.scaffold00152 975362 1 C T scaffold154 ScafM SNP 0039.scaffold00152 975370 2 TA AC scaffold154 ScafM SNP 0039.scaffold00152 975395 1 A G scaffold154 ScafM SNP 0039.scaffold00152 975430 1 A T scaffold154 ScafM SNP 0039.scaffold00152 975432 2 CA GG scaffold154 ScafM INDEL 0039.scaffold00152 975434 1 . C scaffold154 ScafM INDEL 0039.scaffold00152 975440 2 TC .. scaffold154 ScafM SNP 0039.scaffold00152 975455 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975463 2 AA GG scaffold154 ScafM SNP 0039.scaffold00152 975496 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975508 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975517 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975524 1 A G scaffold154 ScafM SNP 0039.scaffold00152 975544 1 C T scaffold154 ScafM SNP 0039.scaffold00152 975568 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975578 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975582 1 G C scaffold154 ScafM SNP 0039.scaffold00152 975594 1 C A scaffold154 ScafM SNP 0039.scaffold00152 975598 1 C A scaffold154 ScafM SNP 0039.scaffold00152 975605 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975619 1 A G scaffold154 ScafM SNP 0039.scaffold00152 975627 1 G A scaffold154 ScafM INDEL 0039.scaffold00152 975668 1 . A scaffold154 ScafM SNP 0039.scaffold00152 975671 1 T G scaffold154 ScafM SNP 0039.scaffold00152 975701 1 A G scaffold154 ScafM SNP 0039.scaffold00152 975707 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975732 1 G A scaffold154 ScafM SNP 0039.scaffold00152 975748 1 A G scaffold154 ScafM SNP 0039.scaffold00152 975777 1 T C scaffold154 ScafM SNP 0039.scaffold00152 975782 1 C T scaffold154 ScafM SNP 0039.scaffold00152 975785 2 CA TG scaffold154 ReadM SNP 0039.scaffold00152 975919 1 G T - ReadM SNP 0039.scaffold00152 975963 1 A G - ReadM SNP 0039.scaffold00152 976004 1 T A - ScafM SNP 0039.scaffold00152 976413 1 T C scaffold154 ScafM SNP 0039.scaffold00152 976423 1 G A scaffold154 ScafM INDEL 0039.scaffold00152 976508 1 . A scaffold154 ScafM SNP 0039.scaffold00152 976555 1 C T scaffold154 ScafM SNP 0039.scaffold00152 977154 1 C A scaffold154 ScafM SNP 0039.scaffold00152 977160 1 T A scaffold154 ScafM SNP 0039.scaffold00152 977193 1 A T scaffold154 ScafM SNP 0039.scaffold00152 977309 1 A G scaffold154 ScafM SNP 0039.scaffold00152 977319 2 CA TC scaffold154 ScafM SNP 0039.scaffold00152 977324 1 T C scaffold154 ScafM SNP 0039.scaffold00152 977377 1 A G scaffold154 ScafM SNP 0039.scaffold00152 977395 1 C T scaffold154 ScafM SNP 0039.scaffold00152 977398 1 T C scaffold154 ScafM SNP 0039.scaffold00152 977404 1 T C scaffold154 ScafM SNP 0039.scaffold00152 977450 1 T C scaffold154 ScafM SNP 0039.scaffold00152 977457 1 G T scaffold154 ScafM SNP 0039.scaffold00152 977463 1 T C scaffold154 ScafM SNP 0040.scaffold00153 7313 1 A C scaffold35784 ReadM SNP 0040.scaffold00153 9357 1 T A - ReadM SNP 0040.scaffold00153 9500 1 A C - ReadM SNP 0040.scaffold00153 9806 1 A T - ReadM SNP 0040.scaffold00153 9911 1 C G - ReadM SNP 0040.scaffold00153 10064 1 T C - ReadM SNP 0040.scaffold00153 10072 1 G A - ReadM SNP 0040.scaffold00153 10159 1 T C - ReadM SNP 0040.scaffold00153 10192 1 C T - ReadM SNP 0040.scaffold00153 10359 1 G A - ReadM SNP 0040.scaffold00153 10461 1 C T - ReadM SNP 0040.scaffold00153 10491 1 G A - ReadM SNP 0040.scaffold00153 13344 1 T G - ScafM INDEL 0040.scaffold00153 13344 1 . G scaffold9878 Both SNP 0040.scaffold00153 13377 1 C T scaffold9878 Both SNP 0040.scaffold00153 13515 1 T C scaffold9878 Both SNP 0040.scaffold00153 13535 1 G T scaffold9878 Both SNP 0040.scaffold00153 13661 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 13696 1 C A scaffold9878 ScafM INDEL 0040.scaffold00153 13713 14 TCTAACACATAATA .............. scaffold9878 Both SNP 0040.scaffold00153 13905 1 G T scaffold9878 Both SNP 0040.scaffold00153 14296 1 A C scaffold9878 Both SNP 0040.scaffold00153 14347 1 A G scaffold9878 Both SNP 0040.scaffold00153 14455 1 T C scaffold9878 Both SNP 0040.scaffold00153 14482 1 A C scaffold9878 Both SNP 0040.scaffold00153 14517 1 C T scaffold9878 Both SNP 0040.scaffold00153 14662 1 T C scaffold9878 Both SNP 0040.scaffold00153 14733 1 T C scaffold9878 Both SNP 0040.scaffold00153 14813 1 C T scaffold9878 Both SNP 0040.scaffold00153 14951 1 A G scaffold9878 Both SNP 0040.scaffold00153 15202 1 G C scaffold9878 Both SNP 0040.scaffold00153 15242 1 A G scaffold9878 Both SNP 0040.scaffold00153 15269 1 G A scaffold9878 Both SNP 0040.scaffold00153 15362 1 G C scaffold9878 Both SNP 0040.scaffold00153 15419 1 C T scaffold9878 Both SNP 0040.scaffold00153 15515 1 G A scaffold9878 Both SNP 0040.scaffold00153 15650 1 T C scaffold9878 ScafM SNP 0040.scaffold00153 15907 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 15916 1 T C scaffold9878 ScafM SNP 0040.scaffold00153 15918 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 15971 1 A C scaffold9878 Both SNP 0040.scaffold00153 16007 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 16029 1 G T scaffold9878 ScafM SNP 0040.scaffold00153 16085 1 A G scaffold9878 ScafM INDEL 0040.scaffold00153 16094 8 GTATGTTG ........ scaffold9878 ScafM INDEL 0040.scaffold00153 16107 2 AG .. scaffold9878 ScafM SNP 0040.scaffold00153 16111 1 G T scaffold9878 ScafM SNP 0040.scaffold00153 16135 1 G C scaffold9878 ScafM INDEL 0040.scaffold00153 16198 36 .................................... GAACAGAATCATAAATCTTTTTTTTTTTTTGAGGGG scaffold9878 ScafM SNP 0040.scaffold00153 16259 1 G C scaffold9878 ScafM SNP 0040.scaffold00153 16266 1 T A scaffold9878 ScafM SNP 0040.scaffold00153 16271 1 C T scaffold9878 ScafM SNP 0040.scaffold00153 16273 1 C T scaffold9878 ScafM SNP 0040.scaffold00153 16299 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 16316 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 16340 1 G C scaffold9878 ScafM SNP 0040.scaffold00153 16345 1 T C scaffold9878 ScafM SNP 0040.scaffold00153 16358 1 C G scaffold9878 ScafM INDEL 0040.scaffold00153 16369 14 .............. TTAATATATACATA scaffold9878 ScafM SNP 0040.scaffold00153 16389 1 T C scaffold9878 ScafM SNP 0040.scaffold00153 16407 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 16411 1 T A scaffold9878 ScafM SNP 0040.scaffold00153 16418 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 16423 1 T C scaffold9878 ScafM SNP 0040.scaffold00153 16430 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 16482 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 16485 2 TA CT scaffold9878 ScafM SNP 0040.scaffold00153 16514 1 A G scaffold9878 ScafM INDEL 0040.scaffold00153 16518 1 C . scaffold9878 ScafM INDEL 0040.scaffold00153 16537 6 ...... ATAAAA scaffold9878 ScafM SNP 0040.scaffold00153 16553 1 G A scaffold9878 ScafM INDEL 0040.scaffold00153 16620 3 CGA ... scaffold9878 ScafM SNP 0040.scaffold00153 16649 1 T C scaffold9878 ScafM INDEL 0040.scaffold00153 16662 5 ..... AAAAG scaffold9878 ScafM INDEL 0040.scaffold00153 16671 10 .......... AATTAAAAAA scaffold9878 ScafM INDEL 0040.scaffold00153 16674 1 . G scaffold9878 ScafM INDEL 0040.scaffold00153 16726 1 A . scaffold9878 ScafM INDEL 0040.scaffold00153 16778 2 .C GA scaffold9878 ScafM INDEL 0040.scaffold00153 16793 1 . G scaffold9878 ScafM INDEL 0040.scaffold00153 16794 1 . G scaffold9878 ScafM SNP 0040.scaffold00153 16796 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 16807 1 A T scaffold9878 ScafM SNP 0040.scaffold00153 16845 1 A T scaffold9878 ScafM SNP 0040.scaffold00153 16850 1 A T scaffold9878 ScafM SNP 0040.scaffold00153 16869 1 C A scaffold9878 ScafM SNP 0040.scaffold00153 16876 1 A C scaffold9878 ScafM SNP 0040.scaffold00153 16882 1 A C scaffold9878 ScafM INDEL 0040.scaffold00153 16896 1 C . scaffold9878 ScafM INDEL 0040.scaffold00153 16917 1 T . scaffold9878 ScafM SNP 0040.scaffold00153 16920 1 T G scaffold9878 Both SNP 0040.scaffold00153 16980 1 A T scaffold9878 Both SNP 0040.scaffold00153 17116 1 G C scaffold9878 Both SNP 0040.scaffold00153 17244 1 A G scaffold9878 Both INDEL 0040.scaffold00153 17459 2 .. AG scaffold9878 ReadM SNP 0040.scaffold00153 17614 1 T C - ScafM SNP 0040.scaffold00153 17735 1 T G scaffold9878 ScafM SNP 0040.scaffold00153 17768 1 C T scaffold9878 ScafM INDEL 0040.scaffold00153 17769 2 .. AC scaffold9878 ScafM INDEL 0040.scaffold00153 17776 1 . T scaffold9878 ReadM INDEL 0040.scaffold00153 17842 1 T . - ReadM SNP 0040.scaffold00153 17884 1 A C - ReadM SNP 0040.scaffold00153 17982 1 G A - ReadM SNP 0040.scaffold00153 18335 1 T C - ReadM SNP 0040.scaffold00153 18351 1 T C - ReadM SNP 0040.scaffold00153 18450 1 A G - ReadM SNP 0040.scaffold00153 18475 1 C T - ReadM INDEL 0040.scaffold00153 18973 1 T . - ScafM SNP 0040.scaffold00153 18980 1 T A scaffold9878 ReadM SNP 0040.scaffold00153 19102 1 A G - Both INDEL 0040.scaffold00153 19148 1 . A scaffold9878 ReadM SNP 0040.scaffold00153 19373 1 T G - Both SNP 0040.scaffold00153 19507 1 G C scaffold9878 ReadM SNP 0040.scaffold00153 19691 1 A G - ReadM SNP 0040.scaffold00153 19697 1 T C - Both SNP 0040.scaffold00153 19759 1 A T scaffold9878 Both SNP 0040.scaffold00153 19814 1 A G scaffold9878 ReadM SNP 0040.scaffold00153 20013 1 G C - ReadM SNP 0040.scaffold00153 20076 1 G A - ReadM SNP 0040.scaffold00153 20148 1 A T - ReadM SNP 0040.scaffold00153 20183 1 T G - ReadM SNP 0040.scaffold00153 20212 1 C T - ReadM SNP 0040.scaffold00153 20233 1 G A - ReadM SNP 0040.scaffold00153 20322 1 A T - ReadM SNP 0040.scaffold00153 20580 1 T C - ScafM INDEL 0040.scaffold00153 20647 5 ..... AATTT scaffold9878 Both SNP 0040.scaffold00153 20671 1 C G scaffold9878 Both SNP 0040.scaffold00153 20774 1 T A scaffold9878 Both SNP 0040.scaffold00153 20783 1 G A scaffold9878 Both SNP 0040.scaffold00153 21003 1 A C scaffold9878 Both SNP 0040.scaffold00153 21078 1 C G scaffold9878 Both SNP 0040.scaffold00153 21118 1 A T scaffold9878 Both SNP 0040.scaffold00153 21132 1 G A scaffold9878 Both SNP 0040.scaffold00153 21253 1 C A scaffold9878 Both SNP 0040.scaffold00153 21271 1 T C scaffold9878 Both SNP 0040.scaffold00153 21320 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 21345 1 G A scaffold9878 ScafM SNP 0040.scaffold00153 21354 1 A G scaffold9878 ScafM SNP 0040.scaffold00153 21426 1 A G C19797965 ScafM SNP 0040.scaffold00153 21436 1 G A C19797965 ScafM SNP 0040.scaffold00153 21460 1 A G C19797965 ScafM SNP 0040.scaffold00153 21486 1 A C C19797965 ScafM SNP 0040.scaffold00153 21537 1 G A C19797965 ScafM SNP 0040.scaffold00153 21567 1 T C C19797965 ScafM SNP 0040.scaffold00153 21633 1 T G C19797965 ScafM SNP 0040.scaffold00153 21716 1 G A C19797965 ScafM SNP 0040.scaffold00153 21726 1 T C C19797965 ReadM SNP 0040.scaffold00153 30035 1 T G - Both SNP 0040.scaffold00153 30097 1 T G C19797965 Both SNP 0040.scaffold00153 30116 1 G A C19797965 Both SNP 0040.scaffold00153 30142 1 A G C19797965 Both SNP 0040.scaffold00153 30158 1 T C C19797965 Both INDEL 0040.scaffold00153 30174 1 C . C19797965 Both SNP 0040.scaffold00153 30227 1 C T C19797965 Both SNP 0040.scaffold00153 30380 1 A G C19797965 Both SNP 0040.scaffold00153 30385 1 A T C19797965 Both SNP 0040.scaffold00153 30390 1 C G C19797965 Both SNP 0040.scaffold00153 30485 1 T A C19797965 Both SNP 0040.scaffold00153 30491 1 T A C19797965 ScafM SNP 0040.scaffold00153 30583 1 G A C19797965 Both SNP 0040.scaffold00153 30612 1 G T C19797965 Both SNP 0040.scaffold00153 30685 1 A G C19797965 ScafM SNP 0040.scaffold00153 30732 1 G C C19797965 ScafM SNP 0040.scaffold00153 30734 1 A G C19797965 ScafM INDEL 0040.scaffold00153 30762 2 TT .A C19797965 Both SNP 0040.scaffold00153 30801 1 G A C19797965 ScafM SNP 0040.scaffold00153 30846 2 AT GC C19797965 Both SNP 0040.scaffold00153 30896 1 A G C19797965 Both SNP 0040.scaffold00153 30907 1 A G C19797965 Both SNP 0040.scaffold00153 30937 1 G A C19797965 Both SNP 0040.scaffold00153 30990 1 G C C19797965 Both SNP 0040.scaffold00153 31020 1 C T C19797965 Both SNP 0040.scaffold00153 31174 1 G A C19797965 ReadM SNP 0040.scaffold00153 31189 1 C T - ReadM SNP 0040.scaffold00153 31192 1 G C - ReadM SNP 0040.scaffold00153 31422 1 T C - ReadM INDEL 0040.scaffold00153 31518 1 . T - Both SNP 0040.scaffold00153 31599 1 C T C19797965 ReadM SNP 0040.scaffold00153 31662 1 T C - ReadM SNP 0040.scaffold00153 31720 1 A G - ReadM SNP 0040.scaffold00153 31750 1 G A - Both SNP 0040.scaffold00153 31758 1 C A C19797965 Both SNP 0040.scaffold00153 31803 1 C T C19797965 Both SNP 0040.scaffold00153 31881 1 A G C19797965 Both INDEL 0040.scaffold00153 31984 1 A . C19797965 Both SNP 0040.scaffold00153 32119 1 A G C19797965 Both SNP 0040.scaffold00153 32204 1 A T C19797965 Both SNP 0040.scaffold00153 32211 1 A G C19797965 Both SNP 0040.scaffold00153 32232 1 A G C19797965 ScafM SNP 0040.scaffold00153 32245 1 C T C19797965 Both SNP 0040.scaffold00153 32347 1 G A C19797965 Both SNP 0040.scaffold00153 32387 1 C T C19797965 Both SNP 0040.scaffold00153 32574 1 T G C19797965 Both INDEL 0040.scaffold00153 32653 2 TT .. C19797965 Both SNP 0040.scaffold00153 32671 1 G C C19797965 Both SNP 0040.scaffold00153 32719 1 A G C19797965 Both SNP 0040.scaffold00153 32726 1 A C C19797965 Both SNP 0040.scaffold00153 32778 1 G A C19797965 Both SNP 0040.scaffold00153 32848 2 TG AA C19797965 Both SNP 0040.scaffold00153 32853 1 C T C19797965 ScafM SNP 0040.scaffold00153 33014 1 A G C19797965 ScafM SNP 0040.scaffold00153 33016 1 G T C19797965 ScafM INDEL 0040.scaffold00153 33064 1 . T C19797965 ScafM SNP 0040.scaffold00153 33067 1 C A C19797965 ScafM SNP 0040.scaffold00153 33070 1 C A C19797965 Both SNP 0040.scaffold00153 33107 1 G A C19797965 Both SNP 0040.scaffold00153 33116 1 T C C19797965 Both SNP 0040.scaffold00153 33218 1 C T C19797965 Both SNP 0040.scaffold00153 33299 1 G T C19797965 Both SNP 0040.scaffold00153 33344 1 A C C19797965 ScafM SNP 0040.scaffold00153 33358 1 G T C19797965 ScafM SNP 0040.scaffold00153 33360 1 C T C19797965 Both SNP 0040.scaffold00153 33396 1 C G C19797965 Both SNP 0040.scaffold00153 33424 1 A G C19797965 ScafM INDEL 0040.scaffold00153 33464 25 ......................... GGTTTGCACCATTTCCACAGCCGAG C19797965 ScafM INDEL 0040.scaffold00153 33469 6 ...... AGCTGC C19797965 ScafM INDEL 0040.scaffold00153 33470 1 . C C19797965 Both SNP 0040.scaffold00153 33526 1 A C C19797965 Both SNP 0040.scaffold00153 33534 1 T G C19797965 ReadM SNP 0040.scaffold00153 33640 1 C A - Both SNP 0040.scaffold00153 33918 1 C T scaffold9666 Both SNP 0040.scaffold00153 33933 1 G T scaffold9666 Both SNP 0040.scaffold00153 33984 1 T C scaffold9666 Both SNP 0040.scaffold00153 33986 1 A G scaffold9666 ReadM SNP 0040.scaffold00153 34007 1 A C - ReadM SNP 0040.scaffold00153 34099 1 C A - ReadM SNP 0040.scaffold00153 34109 1 C A - ReadM SNP 0040.scaffold00153 34130 1 T C - ReadM SNP 0040.scaffold00153 34388 1 C T - ReadM SNP 0040.scaffold00153 34416 1 A G - ReadM SNP 0040.scaffold00153 34425 1 T C - ReadM SNP 0040.scaffold00153 34516 1 T C - ReadM SNP 0040.scaffold00153 34594 1 A G - ReadM SNP 0040.scaffold00153 34610 1 T C - ReadM INDEL 0040.scaffold00153 34643 1 A . - ReadM SNP 0040.scaffold00153 35086 1 A G - ReadM SNP 0040.scaffold00153 35118 1 A G - ReadM SNP 0040.scaffold00153 35166 1 A C - ReadM SNP 0040.scaffold00153 35282 1 C T - ReadM SNP 0040.scaffold00153 35663 1 G A - Both SNP 0040.scaffold00153 35835 1 G C scaffold9666 Both SNP 0040.scaffold00153 35917 1 A G scaffold9666 Both SNP 0040.scaffold00153 35924 1 A G scaffold9666 Both SNP 0040.scaffold00153 36058 1 C T scaffold9666 ScafM SNP 0040.scaffold00153 36114 1 A G scaffold9666 ScafM SNP 0040.scaffold00153 36127 1 T C scaffold9666 ScafM INDEL 0040.scaffold00153 36143 2 AA .. scaffold9666 ScafM INDEL 0040.scaffold00153 36180 1 . A scaffold9666 ScafM SNP 0040.scaffold00153 36192 1 C T scaffold9666 ReadM SNP 0040.scaffold00153 36369 1 T G - ReadM SNP 0040.scaffold00153 36395 1 T G - Both INDEL 0040.scaffold00153 36503 1 T . scaffold9666 Both SNP 0040.scaffold00153 36517 1 T C scaffold9666 Both SNP 0040.scaffold00153 36549 1 C T scaffold9666 Both SNP 0040.scaffold00153 36590 1 T C scaffold9666 ReadM SNP 0040.scaffold00153 36648 1 T C - ReadM SNP 0040.scaffold00153 36813 1 G A - ReadM SNP 0040.scaffold00153 36857 1 G A - Both SNP 0040.scaffold00153 36986 1 A G scaffold9666 Both SNP 0040.scaffold00153 37027 1 G T scaffold9666 ScafM SNP 0040.scaffold00153 37086 1 A G scaffold9666 ScafM SNP 0040.scaffold00153 37092 1 C T scaffold9666 ScafM SNP 0040.scaffold00153 37100 1 T G scaffold9666 ScafM SNP 0040.scaffold00153 37103 1 G A scaffold9666 ScafM SNP 0040.scaffold00153 37106 1 C T scaffold9666 ScafM SNP 0040.scaffold00153 37146 1 A C scaffold9666 Both SNP 0040.scaffold00153 37168 1 A G scaffold9666 ReadM SNP 0040.scaffold00153 37255 1 T C - ReadM SNP 0040.scaffold00153 37343 1 T C - ReadM SNP 0040.scaffold00153 37393 1 C T - Both SNP 0040.scaffold00153 37495 1 T C scaffold9666 ReadM SNP 0040.scaffold00153 37528 1 C T - ReadM SNP 0040.scaffold00153 37791 1 G A - ReadM SNP 0040.scaffold00153 38021 1 T A - ReadM SNP 0040.scaffold00153 38075 1 T C - ReadM SNP 0040.scaffold00153 38091 1 T C - ReadM SNP 0040.scaffold00153 38226 1 A G - ReadM SNP 0040.scaffold00153 38296 1 T A - ReadM INDEL 0040.scaffold00153 38319 1 A . - ReadM SNP 0040.scaffold00153 38462 1 G A - ReadM SNP 0040.scaffold00153 38503 1 C T - Both SNP 0040.scaffold00153 38536 1 C T scaffold9666 Both SNP 0040.scaffold00153 38581 1 A G scaffold9666 Both SNP 0040.scaffold00153 38829 1 C T scaffold9666 Both SNP 0040.scaffold00153 38951 1 T C scaffold9666 Both SNP 0040.scaffold00153 38995 1 T A scaffold9666 Both SNP 0040.scaffold00153 39068 1 C T scaffold9666 Both SNP 0040.scaffold00153 39098 1 C A scaffold9666 Both INDEL 0040.scaffold00153 39106 1 A . scaffold9666 Both SNP 0040.scaffold00153 39136 1 T G scaffold9666 ScafM INDEL 0040.scaffold00153 39248 16 TAAATGAAACAAGGGC ................ scaffold9666 ReadM SNP 0040.scaffold00153 39412 1 T C - ReadM SNP 0040.scaffold00153 39571 1 G A - ReadM SNP 0040.scaffold00153 39595 1 A G - ReadM SNP 0040.scaffold00153 39633 1 G C - ReadM SNP 0040.scaffold00153 39669 1 C T - ReadM SNP 0040.scaffold00153 39703 1 A T - ReadM SNP 0040.scaffold00153 39886 1 T A - ReadM SNP 0040.scaffold00153 39949 1 T C - ReadM SNP 0040.scaffold00153 40103 1 T C - ReadM SNP 0040.scaffold00153 40129 1 A G - ReadM INDEL 0040.scaffold00153 40203 1 . A - ReadM SNP 0040.scaffold00153 40213 1 G A - ReadM SNP 0040.scaffold00153 40276 1 G A - ReadM SNP 0040.scaffold00153 40306 1 C T - ReadM SNP 0040.scaffold00153 40409 1 A C - ReadM SNP 0040.scaffold00153 40692 1 A G - ReadM SNP 0040.scaffold00153 40700 1 G A - ReadM SNP 0040.scaffold00153 40785 1 C T - ReadM SNP 0040.scaffold00153 40791 1 T A - ReadM SNP 0040.scaffold00153 41119 1 A G - ReadM SNP 0040.scaffold00153 41122 1 A G - ReadM SNP 0040.scaffold00153 41180 1 C T - ReadM SNP 0040.scaffold00153 41486 1 G A - ReadM SNP 0040.scaffold00153 41585 1 G T - ScafM SNP 0041.scaffold00154 772 1 C T scaffold36731 ScafM SNP 0041.scaffold00154 1000 1 T G scaffold70522 ScafM SNP 0041.scaffold00154 1010 1 G A scaffold70522 ScafM SNP 0041.scaffold00154 1017 1 T G scaffold70522 ReadM INDEL 0041.scaffold00154 1226 1 . T - ScafM SNP 0041.scaffold00154 1942 1 A C scaffold30469 ScafM SNP 0041.scaffold00154 1968 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 1981 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 2023 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2045 1 C A scaffold30469 ScafM SNP 0041.scaffold00154 2065 1 A G scaffold30469 ScafM SNP 0041.scaffold00154 2089 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2092 1 A T scaffold30469 ScafM SNP 0041.scaffold00154 2099 1 T C scaffold30469 ScafM INDEL 0041.scaffold00154 2102 1 . C scaffold30469 ScafM SNP 0041.scaffold00154 2140 1 C A scaffold30469 ScafM SNP 0041.scaffold00154 2165 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2172 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2188 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2209 1 G C scaffold30469 ScafM SNP 0041.scaffold00154 2224 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2236 1 C G scaffold30469 ScafM SNP 0041.scaffold00154 2247 1 A G scaffold30469 ScafM SNP 0041.scaffold00154 2263 1 A T scaffold30469 ScafM SNP 0041.scaffold00154 2277 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 2279 1 A G scaffold30469 ScafM SNP 0041.scaffold00154 2283 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2302 1 T G scaffold30469 ScafM SNP 0041.scaffold00154 2312 2 CG TT scaffold30469 ScafM SNP 0041.scaffold00154 2330 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2333 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2340 1 C G scaffold30469 ScafM SNP 0041.scaffold00154 2370 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2376 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2423 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 2455 1 A G scaffold30469 ScafM SNP 0041.scaffold00154 2481 1 A C scaffold30469 ScafM SNP 0041.scaffold00154 2530 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2542 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 2560 1 G T scaffold30469 ScafM SNP 0041.scaffold00154 2568 2 TG CA scaffold30469 ScafM SNP 0041.scaffold00154 2596 1 G A scaffold30469 ScafM SNP 0041.scaffold00154 2600 1 C T scaffold30469 ScafM SNP 0041.scaffold00154 2602 1 C G scaffold30469 ScafM SNP 0041.scaffold00154 2611 2 TT CG scaffold30469 ScafM SNP 0041.scaffold00154 2624 1 A G scaffold30469 ScafM SNP 0041.scaffold00154 2669 1 T C scaffold30469 ScafM SNP 0041.scaffold00154 2676 2 GA AT scaffold30469 ScafM SNP 0041.scaffold00154 2916 1 A C scaffold4846 ScafM SNP 0041.scaffold00154 3789 1 A T scaffold4846 ScafM SNP 0041.scaffold00154 3879 1 A G scaffold4846 ScafM INDEL 0041.scaffold00154 3991 1 . T scaffold4846 ScafM SNP 0041.scaffold00154 5691 1 C T scaffold4846 ScafM SNP 0041.scaffold00154 5771 1 G A scaffold4846 ScafM INDEL 0041.scaffold00154 5778 3 ... ATG scaffold4846 ScafM INDEL 0041.scaffold00154 5779 1 . C scaffold4846 ScafM SNP 0041.scaffold00154 5811 1 A C scaffold4846 ScafM SNP 0041.scaffold00154 5825 1 G T scaffold4846 ScafM SNP 0041.scaffold00154 5843 1 T G scaffold4846 ScafM INDEL 0041.scaffold00154 5844 1 . T scaffold4846 ScafM SNP 0041.scaffold00154 5846 1 A C scaffold4846 ScafM SNP 0041.scaffold00154 5861 1 T G scaffold4846 ScafM SNP 0041.scaffold00154 5882 1 T A scaffold4846 ReadM SNP 0041.scaffold00154 6909 1 A G - ReadM INDEL 0041.scaffold00154 9547 2 AA .. - ReadM SNP 0041.scaffold00154 9667 1 A G - ReadM SNP 0041.scaffold00154 9704 1 T C - ScafM SNP 0041.scaffold00154 9848 1 A T scaffold4846 ScafM INDEL 0041.scaffold00154 10267 2 .. TT scaffold4846 ScafM SNP 0041.scaffold00154 10624 1 T G scaffold4846 Both SNP 0041.scaffold00154 10630 1 A T scaffold4846 Both SNP 0041.scaffold00154 10994 1 A G scaffold4846 Both INDEL 0041.scaffold00154 11164 2 .. TT scaffold4846 ScafM SNP 0041.scaffold00154 11166 1 A T scaffold4846 ScafM SNP 0041.scaffold00154 11551 1 C T scaffold4846 ScafM SNP 0041.scaffold00154 11702 1 T C scaffold4846 ReadM SNP 0041.scaffold00154 11966 1 G A - ScafM SNP 0041.scaffold00154 12087 1 C A scaffold4846 ScafM SNP 0041.scaffold00154 12158 1 A T scaffold4846 ReadM SNP 0041.scaffold00154 13407 1 A G - ReadM INDEL 0041.scaffold00154 14442 1 T . - ReadM SNP 0041.scaffold00154 14664 1 T C - ReadM SNP 0041.scaffold00154 14917 1 A G - ReadM SNP 0041.scaffold00154 15065 1 G C - Both SNP 0041.scaffold00154 15782 1 C G scaffold20142 Both SNP 0041.scaffold00154 15840 1 A T scaffold20142 Both SNP 0041.scaffold00154 15884 1 A G scaffold20142 Both INDEL 0041.scaffold00154 16337 1 . T scaffold20142 Both SNP 0041.scaffold00154 16879 1 G A scaffold20142 ScafM SNP 0041.scaffold00154 17404 2 AT GG scaffold20142 ScafM SNP 0041.scaffold00154 17643 1 A G scaffold20142 ReadM SNP 0041.scaffold00154 18134 1 G A - Both SNP 0041.scaffold00154 18620 1 T G scaffold20142 ScafM SNP 0041.scaffold00154 19292 1 A G scaffold20142 ScafM INDEL 0041.scaffold00154 19317 2 TT .. scaffold20142 ScafM SNP 0041.scaffold00154 20024 1 T C scaffold20142 ScafM SNP 0041.scaffold00154 20064 1 C G scaffold20142 Both SNP 0041.scaffold00154 21389 1 G A scaffold20142 Both SNP 0041.scaffold00154 21438 1 T C scaffold20142 ScafM SNP 0041.scaffold00154 21511 1 G T scaffold20142 Both SNP 0041.scaffold00154 21948 1 C G scaffold20142 ScafM SNP 0041.scaffold00154 22344 1 T G scaffold20142 ScafM SNP 0041.scaffold00154 22383 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 22980 1 G A scaffold20142 ScafM SNP 0041.scaffold00154 22982 1 T C scaffold20142 ScafM SNP 0041.scaffold00154 23013 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 23069 1 G C scaffold20142 ScafM INDEL 0041.scaffold00154 23084 2 .C AG scaffold20142 ScafM SNP 0041.scaffold00154 23624 1 T C scaffold20142 ScafM SNP 0041.scaffold00154 23849 1 T C scaffold20142 ScafM SNP 0041.scaffold00154 23869 1 C T scaffold20142 ScafM SNP 0041.scaffold00154 23988 1 T A scaffold20142 ScafM SNP 0041.scaffold00154 24201 1 A T scaffold20142 ReadM SNP 0041.scaffold00154 25023 1 C A - ScafM SNP 0041.scaffold00154 27308 1 T G scaffold20142 ScafM SNP 0041.scaffold00154 28426 1 T G scaffold20142 Both SNP 0041.scaffold00154 28843 1 C T scaffold20142 ReadM INDEL 0041.scaffold00154 29747 1 T . - ReadM SNP 0041.scaffold00154 29822 1 T A - ReadM SNP 0041.scaffold00154 30691 1 G A - ScafM SNP 0041.scaffold00154 30792 1 G A scaffold20142 ScafM SNP 0041.scaffold00154 31230 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 31352 1 G A scaffold20142 ReadM SNP 0041.scaffold00154 37401 1 G T - ReadM SNP 0041.scaffold00154 37430 1 G A - ReadM SNP 0041.scaffold00154 37478 1 G T - ReadM SNP 0041.scaffold00154 37559 1 T G - ScafM SNP 0041.scaffold00154 40894 1 C A scaffold4574 ScafM SNP 0041.scaffold00154 40920 1 C T scaffold4574 ScafM SNP 0041.scaffold00154 40948 1 T C scaffold4574 ScafM SNP 0041.scaffold00154 40972 1 A G scaffold4574 ScafM SNP 0041.scaffold00154 40976 1 A G scaffold4574 ScafM SNP 0041.scaffold00154 40980 1 A G scaffold4574 ScafM SNP 0041.scaffold00154 41025 1 C T scaffold4574 ScafM SNP 0041.scaffold00154 41034 1 A T scaffold4574 ScafM SNP 0041.scaffold00154 41044 1 G C scaffold4574 ScafM SNP 0041.scaffold00154 41052 1 G A scaffold4574 ScafM SNP 0041.scaffold00154 41069 1 A G scaffold4574 ScafM SNP 0041.scaffold00154 41093 1 C T scaffold4574 ScafM SNP 0041.scaffold00154 41195 1 T C scaffold4574 ScafM SNP 0041.scaffold00154 41278 1 C T scaffold4574 ScafM SNP 0041.scaffold00154 41290 1 C A scaffold4574 ReadM SNP 0041.scaffold00154 47043 1 C T - ScafM SNP 0041.scaffold00154 47207 1 C A scaffold24964 ScafM SNP 0041.scaffold00154 47230 1 G A scaffold24964 ScafM SNP 0041.scaffold00154 47419 1 T C scaffold24964 Both SNP 0041.scaffold00154 47692 1 A T scaffold24964 Both SNP 0041.scaffold00154 47749 1 G A scaffold24964 ScafM SNP 0041.scaffold00154 47903 1 A G scaffold24964 ScafM INDEL 0041.scaffold00154 47912 48 ................................................ TACCCCCATTTTATCTTTAGTTTGCATCAACAGCTATTAACAGTGACT scaffold24964 ScafM SNP 0041.scaffold00154 47923 1 A G scaffold24964 ScafM SNP 0041.scaffold00154 47928 1 C A scaffold24964 ScafM SNP 0041.scaffold00154 47936 1 C T scaffold24964 ScafM SNP 0041.scaffold00154 47999 1 T C scaffold24964 ScafM SNP 0041.scaffold00154 48004 1 A G scaffold24964 ScafM SNP 0041.scaffold00154 48081 1 T A scaffold24964 ScafM SNP 0041.scaffold00154 48541 1 A G scaffold24964 ReadM SNP 0041.scaffold00154 49573 1 A C - ReadM SNP 0041.scaffold00154 50410 1 C T - ReadM SNP 0041.scaffold00154 51095 1 A G - ReadM SNP 0041.scaffold00154 51113 1 G A - ReadM SNP 0041.scaffold00154 51119 1 T C - ScafM SNP 0041.scaffold00154 52607 1 C A scaffold2156 ScafM SNP 0041.scaffold00154 52614 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 52643 1 C G scaffold2156 ScafM SNP 0041.scaffold00154 52666 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 52716 1 A G scaffold2156 ScafM SNP 0041.scaffold00154 53217 1 C T scaffold2156 ScafM SNP 0041.scaffold00154 53233 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 53246 1 T A scaffold2156 ScafM SNP 0041.scaffold00154 53396 1 C T scaffold2156 ScafM SNP 0041.scaffold00154 53471 1 G A scaffold2156 ScafM INDEL 0041.scaffold00154 53536 2 .. TA scaffold2156 ScafM SNP 0041.scaffold00154 53545 1 C T scaffold2156 ScafM SNP 0041.scaffold00154 53606 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 53673 1 T C scaffold2156 ReadM SNP 0041.scaffold00154 54898 1 G A - ScafM SNP 0041.scaffold00154 57581 1 C T scaffold4136 ScafM SNP 0041.scaffold00154 57600 1 T A scaffold4136 ScafM SNP 0041.scaffold00154 60445 1 T C scaffold34953 ScafM INDEL 0041.scaffold00154 60456 1 G . scaffold34953 ScafM SNP 0041.scaffold00154 60515 1 A C scaffold34953 ScafM SNP 0041.scaffold00154 60560 1 A T scaffold34953 ScafM SNP 0041.scaffold00154 60582 1 T G scaffold34953 ScafM SNP 0041.scaffold00154 60595 1 T C scaffold34953 ScafM SNP 0041.scaffold00154 60630 1 A G scaffold34953 ScafM SNP 0041.scaffold00154 60643 1 G T scaffold34953 ScafM SNP 0041.scaffold00154 60649 1 C A scaffold34953 ScafM INDEL 0041.scaffold00154 60677 12 ............ TTTCTAAAAAAC scaffold34953 ScafM SNP 0041.scaffold00154 63112 1 G A scaffold18564 ReadM SNP 0041.scaffold00154 63376 1 T C - ScafM SNP 0041.scaffold00154 64030 1 A G scaffold18564 ScafM SNP 0041.scaffold00154 64149 1 T C scaffold18564 ScafM SNP 0041.scaffold00154 64427 1 C T scaffold18564 ScafM SNP 0041.scaffold00154 64442 1 G A scaffold18564 ScafM SNP 0041.scaffold00154 65543 1 G A scaffold10854 ScafM SNP 0041.scaffold00154 65626 2 TC CT scaffold10854 ScafM SNP 0041.scaffold00154 65641 1 C T scaffold10854 ScafM SNP 0041.scaffold00154 65686 1 C G scaffold10854 ScafM SNP 0041.scaffold00154 65890 1 G A scaffold10854 ScafM SNP 0041.scaffold00154 65989 1 A T scaffold10854 ScafM SNP 0041.scaffold00154 65992 1 C T scaffold10854 ScafM SNP 0041.scaffold00154 66036 1 A G scaffold10854 ScafM SNP 0041.scaffold00154 66094 1 A G scaffold10854 ScafM INDEL 0041.scaffold00154 66175 3 TTA ... scaffold10854 ScafM SNP 0041.scaffold00154 66182 1 T A scaffold10854 ScafM INDEL 0041.scaffold00154 66216 1 . A scaffold10854 ReadM SNP 0041.scaffold00154 66994 1 G A - ReadM SNP 0041.scaffold00154 73893 1 G A - ScafM SNP 0041.scaffold00154 74167 1 A C scaffold18645 ScafM SNP 0041.scaffold00154 74175 1 A C scaffold18645 ScafM SNP 0041.scaffold00154 74182 1 T C scaffold18645 ScafM SNP 0041.scaffold00154 74196 1 T C scaffold18645 ScafM SNP 0041.scaffold00154 74212 1 A C scaffold18645 ScafM SNP 0041.scaffold00154 74214 1 A G scaffold18645 ScafM SNP 0041.scaffold00154 74221 1 A G scaffold18645 ScafM INDEL 0041.scaffold00154 74269 1 T . scaffold18645 ScafM INDEL 0041.scaffold00154 74284 1 A . scaffold18645 ScafM INDEL 0041.scaffold00154 74286 1 C . scaffold18645 ScafM SNP 0041.scaffold00154 74293 2 GA TG scaffold18645 ScafM SNP 0041.scaffold00154 74301 1 C A scaffold18645 ScafM SNP 0041.scaffold00154 74328 1 C G scaffold18645 ScafM SNP 0041.scaffold00154 74352 1 A T scaffold18645 ScafM SNP 0041.scaffold00154 74354 1 T A scaffold18645 ScafM SNP 0041.scaffold00154 74406 1 A G scaffold18645 ScafM SNP 0041.scaffold00154 74415 1 G A scaffold18645 ScafM SNP 0041.scaffold00154 87410 1 A G scaffold23997 Both SNP 0041.scaffold00154 87560 1 T C scaffold23997 ReadM SNP 0041.scaffold00154 110663 1 G A - ReadM SNP 0041.scaffold00154 111364 1 G T - ReadM SNP 0041.scaffold00154 111908 1 T C - ReadM SNP 0041.scaffold00154 112327 1 C T - ReadM SNP 0041.scaffold00154 112408 1 G A - ReadM SNP 0041.scaffold00154 112426 1 C T - ScafM SNP 0041.scaffold00154 114640 1 A G scaffold6970 ScafM SNP 0041.scaffold00154 114644 1 T C scaffold6970 ScafM SNP 0041.scaffold00154 114652 1 T C scaffold6970 ScafM SNP 0041.scaffold00154 114701 1 C T scaffold6970 ReadM SNP 0041.scaffold00154 116849 1 C G - ScafM SNP 0041.scaffold00154 118028 1 A C scaffold28914 ScafM SNP 0041.scaffold00154 118107 1 A C scaffold28914 ReadM SNP 0041.scaffold00154 118553 1 A G - ReadM SNP 0041.scaffold00154 121078 1 T G - ReadM SNP 0041.scaffold00154 121305 1 C T - ReadM SNP 0041.scaffold00154 122068 1 T C - ReadM INDEL 0041.scaffold00154 124647 1 T . - ReadM SNP 0041.scaffold00154 126403 1 A G - ReadM SNP 0041.scaffold00154 126520 1 C T - ReadM SNP 0041.scaffold00154 128139 1 C T - ReadM SNP 0041.scaffold00154 129864 1 G C - ScafM SNP 0041.scaffold00154 134243 1 C T scaffold6891 ScafM INDEL 0041.scaffold00154 134363 1 . A scaffold6891 ScafM SNP 0041.scaffold00154 134450 1 C T scaffold6891 ScafM SNP 0041.scaffold00154 134454 1 C G scaffold6891 ScafM SNP 0041.scaffold00154 134515 1 T C scaffold6891 ScafM SNP 0041.scaffold00154 134553 1 G A scaffold6891 ScafM SNP 0041.scaffold00154 134867 1 G A scaffold6891 ScafM SNP 0041.scaffold00154 134907 1 A G scaffold6891 ScafM SNP 0041.scaffold00154 134916 1 C A scaffold6891 ReadM SNP 0041.scaffold00154 135198 1 A G - ReadM SNP 0041.scaffold00154 135225 1 C T - ReadM SNP 0041.scaffold00154 140325 1 G A - ReadM SNP 0041.scaffold00154 157567 1 C T - ReadM SNP 0041.scaffold00154 157985 1 G A - ScafM SNP 0041.scaffold00154 158966 1 C T scaffold15511 ScafM SNP 0041.scaffold00154 159682 1 A C scaffold15511 ScafM SNP 0041.scaffold00154 159684 1 A G scaffold15511 Both SNP 0041.scaffold00154 159737 1 T C scaffold15511 ReadM SNP 0041.scaffold00154 160036 1 C A - ReadM SNP 0041.scaffold00154 160181 1 G A - ReadM SNP 0041.scaffold00154 160310 1 C G - ScafM SNP 0041.scaffold00154 162004 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 162081 1 C T scaffold15511 ScafM SNP 0041.scaffold00154 162120 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 162612 1 T C scaffold60261 ScafM INDEL 0041.scaffold00154 162615 2 .. TT scaffold60261 ScafM INDEL 0041.scaffold00154 162619 6 ...... TAATTT scaffold60261 ScafM SNP 0041.scaffold00154 162628 1 A G scaffold60261 ScafM SNP 0041.scaffold00154 162699 1 G A scaffold60261 ReadM INDEL 0041.scaffold00154 162789 1 . T - ReadM INDEL 0041.scaffold00154 162790 2 .. TT - ReadM INDEL 0041.scaffold00154 163511 1 C . - ReadM SNP 0041.scaffold00154 163968 1 C T - ScafM SNP 0041.scaffold00154 165231 1 G A scaffold15511 ScafM SNP 0041.scaffold00154 165262 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 165708 1 T A scaffold15511 ReadM SNP 0041.scaffold00154 165781 1 A G - ReadM SNP 0041.scaffold00154 165827 1 T C - ReadM SNP 0041.scaffold00154 165993 1 A G - Both SNP 0041.scaffold00154 166144 1 A C scaffold15511 Both SNP 0041.scaffold00154 166313 1 T C scaffold15511 ScafM SNP 0041.scaffold00154 166388 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 166420 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 166512 1 A G scaffold15511 ScafM SNP 0041.scaffold00154 167120 1 T C scaffold15511 ScafM SNP 0041.scaffold00154 167161 1 G C scaffold15511 ScafM SNP 0041.scaffold00154 167165 1 A G scaffold15511 ScafM INDEL 0041.scaffold00154 167196 4 .... CGCA scaffold15511 ScafM SNP 0041.scaffold00154 167253 1 G A scaffold15511 ScafM SNP 0041.scaffold00154 167782 1 T C scaffold15511 ScafM SNP 0041.scaffold00154 169020 1 G A scaffold15511 ScafM SNP 0041.scaffold00154 169082 1 G A scaffold15511 ScafM SNP 0041.scaffold00154 169750 1 A C scaffold15511 ScafM SNP 0041.scaffold00154 170152 1 T C scaffold15511 ReadM SNP 0041.scaffold00154 171615 1 T C - ReadM SNP 0041.scaffold00154 172588 1 T G - ScafM SNP 0041.scaffold00154 172743 1 G A scaffold23481 ScafM SNP 0041.scaffold00154 173157 1 T C scaffold23481 ReadM SNP 0041.scaffold00154 176503 1 C G - ReadM SNP 0041.scaffold00154 176687 1 G T - ScafM INDEL 0041.scaffold00154 176858 1 . C scaffold908 Both SNP 0041.scaffold00154 176908 1 T C scaffold908 ScafM INDEL 0041.scaffold00154 177688 21 ..................... TTTTGTTAAATTTATTTCAAA scaffold908 ScafM INDEL 0041.scaffold00154 177690 2 .. GT scaffold908 ScafM INDEL 0041.scaffold00154 177697 1 . T scaffold908 ReadM SNP 0041.scaffold00154 179996 1 C T - ScafM SNP 0041.scaffold00154 183806 1 A G scaffold7008 Both SNP 0041.scaffold00154 183920 1 C T scaffold7008 ScafM SNP 0041.scaffold00154 184025 1 G A scaffold7008 ScafM SNP 0041.scaffold00154 184607 1 A G scaffold7008 ScafM SNP 0041.scaffold00154 184641 1 C T scaffold7008 ScafM SNP 0041.scaffold00154 184670 1 C A scaffold7008 ScafM SNP 0041.scaffold00154 184752 1 C T scaffold7008 ScafM SNP 0041.scaffold00154 184774 1 A G scaffold7008 ScafM SNP 0041.scaffold00154 184823 1 C T scaffold7008 ScafM SNP 0041.scaffold00154 184859 1 A G scaffold7008 ReadM SNP 0041.scaffold00154 186095 1 C T - ReadM SNP 0041.scaffold00154 186236 1 C T - ReadM INDEL 0041.scaffold00154 187507 1 . T - ScafM SNP 0041.scaffold00154 188673 1 A C scaffold4154 ScafM SNP 0041.scaffold00154 190119 1 G T scaffold19811 ScafM SNP 0041.scaffold00154 190248 1 T C scaffold19811 ScafM SNP 0041.scaffold00154 190508 1 A G scaffold19811 ScafM SNP 0041.scaffold00154 190614 1 T C scaffold19811 ScafM SNP 0041.scaffold00154 190759 1 T C scaffold19811 ScafM SNP 0041.scaffold00154 190826 1 G C scaffold19811 ScafM SNP 0041.scaffold00154 191209 1 T A scaffold19811 ScafM SNP 0041.scaffold00154 191251 2 CT TA scaffold19811 ScafM INDEL 0041.scaffold00154 191273 6 CTCTCA ...... scaffold19811 ScafM INDEL 0041.scaffold00154 191392 10 .......... GGTGTTGTAT scaffold19811 ScafM INDEL 0041.scaffold00154 191394 5 ..... TTCTA scaffold19811 ScafM SNP 0041.scaffold00154 191519 1 T C scaffold19811 ScafM SNP 0041.scaffold00154 191671 1 G A scaffold19811 ReadM SNP 0041.scaffold00154 193071 1 A G - ReadM SNP 0041.scaffold00154 193256 1 A T - ReadM SNP 0041.scaffold00154 193347 1 G A - ScafM SNP 0041.scaffold00154 194200 1 T C scaffold10854 ScafM SNP 0041.scaffold00154 194212 1 C T scaffold10854 ScafM SNP 0041.scaffold00154 194218 1 C T scaffold10854 ScafM SNP 0041.scaffold00154 194238 1 A G scaffold10854 ScafM SNP 0041.scaffold00154 194244 1 C T scaffold10854 ScafM SNP 0041.scaffold00154 194246 1 G T scaffold10854 ScafM SNP 0041.scaffold00154 194249 1 T G scaffold10854 ScafM SNP 0041.scaffold00154 194632 1 T C scaffold10854 ScafM SNP 0041.scaffold00154 195057 2 AC GG scaffold10854 ScafM SNP 0041.scaffold00154 195216 1 A T scaffold10854 ScafM SNP 0041.scaffold00154 198220 1 G T scaffold10854 ReadM SNP 0041.scaffold00154 198449 1 G A - ReadM SNP 0041.scaffold00154 198957 1 T G - ReadM SNP 0041.scaffold00154 199800 1 A G - ReadM SNP 0041.scaffold00154 200285 1 T A - ScafM INDEL 0041.scaffold00154 200918 1 . T scaffold20314 ScafM INDEL 0041.scaffold00154 200922 5 ..... CCTCA scaffold20314 ScafM SNP 0041.scaffold00154 200924 1 C A scaffold20314 ScafM SNP 0041.scaffold00154 200932 1 C T scaffold20314 ScafM SNP 0041.scaffold00154 200936 2 TA CT scaffold20314 ScafM SNP 0041.scaffold00154 200960 1 G A scaffold20314 ScafM SNP 0041.scaffold00154 200974 1 A C scaffold20314 ScafM INDEL 0041.scaffold00154 200979 2 TA .C scaffold20314 ScafM INDEL 0041.scaffold00154 200999 1 C . scaffold20314 ScafM SNP 0041.scaffold00154 201030 1 T A scaffold20314 ScafM SNP 0041.scaffold00154 201034 1 G A scaffold20314 ScafM SNP 0041.scaffold00154 201082 1 T C scaffold20314 ScafM SNP 0041.scaffold00154 201134 1 C T scaffold20314 ScafM INDEL 0041.scaffold00154 201138 6 TACTGT ...... scaffold20314 ScafM INDEL 0041.scaffold00154 201175 1 T . scaffold20314 ScafM SNP 0041.scaffold00154 201177 1 T A scaffold20314 ScafM SNP 0041.scaffold00154 201201 1 T A scaffold20314 ScafM SNP 0041.scaffold00154 201211 1 T C scaffold20314 ScafM SNP 0041.scaffold00154 201238 1 G A scaffold20314 ScafM SNP 0041.scaffold00154 201243 1 T G scaffold20314 ScafM SNP 0041.scaffold00154 201246 1 G T scaffold20314 ScafM SNP 0041.scaffold00154 201313 1 T G scaffold20314 ScafM SNP 0041.scaffold00154 201366 1 C G scaffold20314 ScafM SNP 0041.scaffold00154 201374 1 T C scaffold20314 ScafM SNP 0041.scaffold00154 201385 1 T G scaffold20314 ScafM SNP 0041.scaffold00154 201407 1 G A scaffold20314 ScafM SNP 0041.scaffold00154 201411 1 A G scaffold20314 ScafM SNP 0041.scaffold00154 201415 1 A G scaffold20314 ScafM SNP 0041.scaffold00154 201467 1 A C scaffold20314 ScafM SNP 0041.scaffold00154 201476 1 A G scaffold20314 ScafM INDEL 0041.scaffold00154 201504 1 . T scaffold20314 ScafM INDEL 0041.scaffold00154 201509 2 .T CA scaffold20314 ScafM SNP 0041.scaffold00154 201515 1 T C scaffold20314 ScafM SNP 0041.scaffold00154 201526 1 C T scaffold20314 ScafM SNP 0041.scaffold00154 201601 1 G A scaffold20314 ScafM INDEL 0041.scaffold00154 201618 2 TT .. scaffold20314 ReadM SNP 0041.scaffold00154 212460 1 T A - ReadM SNP 0041.scaffold00154 212849 1 G A - ScafM SNP 0041.scaffold00154 213229 1 C A scaffold10854 Both SNP 0041.scaffold00154 213588 1 G A scaffold10854 Both SNP 0041.scaffold00154 213596 1 G A scaffold10854 Both INDEL 0041.scaffold00154 213700 1 . A scaffold10854 ScafM SNP 0041.scaffold00154 213762 1 A T scaffold10854 ScafM INDEL 0041.scaffold00154 214012 1 T . scaffold10854 ReadM SNP 0041.scaffold00154 214534 1 T A - ScafM SNP 0041.scaffold00154 216933 1 T A scaffold10854 ScafM SNP 0041.scaffold00154 217071 1 T C scaffold10854 ScafM INDEL 0041.scaffold00154 217221 1 T . scaffold10854 ScafM SNP 0041.scaffold00154 217632 1 T C scaffold36644 ScafM SNP 0041.scaffold00154 217635 1 C G scaffold36644 ScafM SNP 0041.scaffold00154 217653 1 A G scaffold36644 ScafM SNP 0041.scaffold00154 217655 1 G A scaffold36644 ScafM SNP 0041.scaffold00154 217665 1 T C scaffold36644 ScafM SNP 0041.scaffold00154 217699 1 T A scaffold36644 ScafM SNP 0041.scaffold00154 217702 1 G A scaffold36644 ScafM SNP 0041.scaffold00154 217727 1 A G scaffold36644 ScafM SNP 0041.scaffold00154 217729 1 T C scaffold36644 ScafM SNP 0041.scaffold00154 217737 1 T C scaffold36644 ScafM SNP 0041.scaffold00154 217764 1 T C scaffold36644 ReadM SNP 0041.scaffold00154 220483 1 G A - Both SNP 0041.scaffold00154 220982 1 G A scaffold28547 ScafM SNP 0041.scaffold00154 221112 1 T A scaffold28547 ScafM SNP 0041.scaffold00154 221170 1 T A scaffold28547 ScafM SNP 0041.scaffold00154 221200 1 A G scaffold28547 ScafM SNP 0041.scaffold00154 221320 1 T C scaffold28547 ReadM SNP 0041.scaffold00154 221396 1 T C - ReadM SNP 0041.scaffold00154 221469 1 T C - ReadM SNP 0041.scaffold00154 221541 1 T C - ReadM SNP 0041.scaffold00154 221553 1 A G - Both SNP 0041.scaffold00154 221891 1 G C scaffold28547 ScafM INDEL 0041.scaffold00154 222397 1 T . scaffold68856 ScafM SNP 0041.scaffold00154 222516 1 G A scaffold68856 ScafM INDEL 0041.scaffold00154 222941 3 ... AAT scaffold68856 ScafM SNP 0041.scaffold00154 223245 1 A T scaffold68856 ReadM SNP 0041.scaffold00154 230828 1 G A - ReadM SNP 0041.scaffold00154 230832 1 C T - ReadM SNP 0041.scaffold00154 231234 1 A T - ScafM SNP 0041.scaffold00154 238842 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 238849 1 G T scaffold2156 Both SNP 0041.scaffold00154 239322 1 G T scaffold2156 ScafM SNP 0041.scaffold00154 239476 1 T C scaffold2156 ScafM SNP 0041.scaffold00154 239661 1 C T scaffold2156 ScafM INDEL 0041.scaffold00154 239733 8 GCCACTTA ........ scaffold2156 ScafM INDEL 0041.scaffold00154 239787 1 T . scaffold2156 ScafM SNP 0041.scaffold00154 239814 1 T A scaffold2156 ScafM INDEL 0041.scaffold00154 239846 1 T . scaffold2156 ScafM INDEL 0041.scaffold00154 239897 1 . C scaffold2156 Both SNP 0041.scaffold00154 240537 1 T A scaffold2156 Both SNP 0041.scaffold00154 240550 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 240683 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 240723 1 G A scaffold2156 ScafM SNP 0041.scaffold00154 240774 1 G A scaffold2156 ScafM INDEL 0041.scaffold00154 240869 1 . T scaffold2156 ScafM SNP 0041.scaffold00154 241165 1 A T scaffold2156 ReadM SNP 0041.scaffold00154 241523 1 C G - ScafM SNP 0041.scaffold00154 243864 1 C A scaffold20142 ScafM SNP 0041.scaffold00154 244065 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 244216 1 A C scaffold20142 ScafM SNP 0041.scaffold00154 244294 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 244339 1 T G scaffold20142 ScafM SNP 0041.scaffold00154 244358 1 C T scaffold20142 ScafM SNP 0041.scaffold00154 244360 1 C G scaffold20142 ScafM SNP 0041.scaffold00154 244392 1 C A scaffold20142 ScafM SNP 0041.scaffold00154 244424 1 A T scaffold20142 ScafM SNP 0041.scaffold00154 244436 1 T G scaffold20142 ScafM SNP 0041.scaffold00154 244460 1 A T scaffold20142 ScafM SNP 0041.scaffold00154 244468 2 CA AG scaffold20142 ScafM SNP 0041.scaffold00154 244480 1 G A scaffold20142 ScafM SNP 0041.scaffold00154 244496 2 CA AC scaffold20142 ScafM SNP 0041.scaffold00154 244500 1 A G scaffold20142 ScafM SNP 0041.scaffold00154 244570 1 C A scaffold20142 ReadM SNP 0041.scaffold00154 247871 1 G A - ScafM SNP 0041.scaffold00154 249622 1 C T scaffold5058 ScafM SNP 0041.scaffold00154 249852 1 A T scaffold5058 ScafM SNP 0041.scaffold00154 250515 1 A T scaffold5058 Both SNP 0041.scaffold00154 250711 1 T C scaffold5058 ScafM SNP 0041.scaffold00154 251027 1 G T scaffold5058 ScafM SNP 0041.scaffold00154 251231 1 T G scaffold5058 ScafM SNP 0041.scaffold00154 251607 1 T C scaffold5058 ScafM SNP 0041.scaffold00154 252109 1 A G scaffold5058 ScafM SNP 0041.scaffold00154 252172 1 T C scaffold5058 ScafM SNP 0041.scaffold00154 252483 1 A T scaffold5058 ScafM SNP 0041.scaffold00154 252660 1 T C scaffold5058 Both SNP 0041.scaffold00154 253154 1 C T scaffold5058 ReadM SNP 0041.scaffold00154 253229 1 A T - ScafM SNP 0041.scaffold00154 262376 1 A G scaffold4852 ScafM INDEL 0041.scaffold00154 262405 1 G . scaffold4852 ScafM SNP 0041.scaffold00154 262411 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 262427 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 262449 1 C A scaffold4852 ScafM SNP 0041.scaffold00154 262460 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 262462 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 262468 1 G T scaffold4852 ScafM SNP 0041.scaffold00154 262477 1 T G scaffold4852 ScafM SNP 0041.scaffold00154 262503 1 A C scaffold4852 ScafM SNP 0041.scaffold00154 262536 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 262558 1 C A scaffold4852 ScafM SNP 0041.scaffold00154 262611 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 262644 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 262671 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 262675 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 262710 2 TG GA scaffold4852 ScafM SNP 0041.scaffold00154 262716 1 T G scaffold4852 ScafM INDEL 0041.scaffold00154 262720 4 .... CAAT scaffold4852 ScafM SNP 0041.scaffold00154 262727 1 T C scaffold4852 ScafM INDEL 0041.scaffold00154 262743 1 . A scaffold4852 ScafM SNP 0041.scaffold00154 262771 1 T A scaffold4852 ScafM SNP 0041.scaffold00154 262773 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 262782 1 C T scaffold4852 Both SNP 0041.scaffold00154 262861 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 262874 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 262876 1 G C scaffold4852 ScafM SNP 0041.scaffold00154 262893 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 262908 2 GG AA scaffold4852 ScafM SNP 0041.scaffold00154 262923 1 G A scaffold4852 ScafM INDEL 0041.scaffold00154 262953 2 .. AA scaffold4852 ScafM SNP 0041.scaffold00154 262955 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 262970 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 262975 1 C G scaffold4852 ScafM INDEL 0041.scaffold00154 262989 1 . A scaffold4852 ScafM SNP 0041.scaffold00154 263035 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 263071 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 263089 1 C A scaffold4852 ScafM SNP 0041.scaffold00154 263101 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 263108 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263110 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263134 1 G T scaffold4852 ScafM SNP 0041.scaffold00154 263149 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 263154 1 A C scaffold4852 ScafM INDEL 0041.scaffold00154 263174 1 G . scaffold4852 ScafM SNP 0041.scaffold00154 263191 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 263203 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 263225 1 C A scaffold4852 ScafM SNP 0041.scaffold00154 263242 1 A T scaffold4852 ScafM INDEL 0041.scaffold00154 263243 1 . A scaffold4852 ScafM SNP 0041.scaffold00154 263255 1 C T scaffold4852 ScafM INDEL 0041.scaffold00154 263265 1 . A scaffold4852 ScafM SNP 0041.scaffold00154 263289 1 G T scaffold4852 ScafM SNP 0041.scaffold00154 263297 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 263315 1 T A scaffold4852 ScafM SNP 0041.scaffold00154 263317 1 T G scaffold4852 ScafM SNP 0041.scaffold00154 263319 1 G T scaffold4852 ScafM SNP 0041.scaffold00154 263327 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 263340 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 263361 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 263382 1 C G scaffold4852 ScafM INDEL 0041.scaffold00154 263405 1 . A scaffold4852 ScafM SNP 0041.scaffold00154 263412 1 T A scaffold4852 ScafM INDEL 0041.scaffold00154 263468 1 A . scaffold4852 ScafM SNP 0041.scaffold00154 263612 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 263641 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263687 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263697 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263706 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 263716 2 TA GG scaffold4852 ScafM SNP 0041.scaffold00154 263815 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 263817 1 A C scaffold4852 ScafM SNP 0041.scaffold00154 263929 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 263938 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 263948 1 C G scaffold4852 Both SNP 0041.scaffold00154 264191 1 A C scaffold4852 ScafM SNP 0041.scaffold00154 264482 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 264572 1 T G scaffold4852 ScafM SNP 0041.scaffold00154 264582 2 AA GC scaffold4852 ScafM SNP 0041.scaffold00154 264623 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 264655 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 264683 1 C G scaffold4852 ScafM INDEL 0041.scaffold00154 264689 2 .. GA scaffold4852 ScafM INDEL 0041.scaffold00154 264691 4 .... AGTC scaffold4852 ScafM SNP 0041.scaffold00154 264828 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 264860 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 264925 1 T C scaffold4852 ScafM SNP 0041.scaffold00154 264936 1 A G scaffold4852 Both SNP 0041.scaffold00154 264943 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 264985 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 265002 1 T A scaffold4852 ScafM SNP 0041.scaffold00154 265015 1 T A scaffold4852 ScafM SNP 0041.scaffold00154 265057 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 265095 1 A C scaffold4852 ScafM SNP 0041.scaffold00154 265111 1 G C scaffold4852 ScafM SNP 0041.scaffold00154 265122 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 265136 1 G A scaffold4852 ScafM SNP 0041.scaffold00154 265157 2 GT TC scaffold4852 ScafM SNP 0041.scaffold00154 265171 1 A G scaffold4852 ScafM SNP 0041.scaffold00154 265191 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 265260 1 G T scaffold4852 ScafM SNP 0041.scaffold00154 265293 1 C A scaffold4852 ScafM SNP 0041.scaffold00154 265300 1 C T scaffold4852 ScafM INDEL 0041.scaffold00154 265484 27 ........................... ATTTCCCGGTAAATCAAGCATTGTGCC scaffold4852 ScafM INDEL 0041.scaffold00154 265485 2 .. AA scaffold4852 ScafM SNP 0041.scaffold00154 265512 1 A T scaffold4852 ScafM SNP 0041.scaffold00154 265562 1 T G scaffold4852 ScafM SNP 0041.scaffold00154 265604 1 C T scaffold4852 ScafM SNP 0041.scaffold00154 266426 1 G A scaffold34972 ScafM SNP 0041.scaffold00154 266519 1 A G scaffold34972 ScafM SNP 0041.scaffold00154 266708 1 A G scaffold34972 ScafM INDEL 0041.scaffold00154 266843 2 CA .T scaffold34972 ScafM SNP 0041.scaffold00154 266870 1 A C scaffold34972 ReadM SNP 0041.scaffold00154 267099 1 G C - ReadM SNP 0041.scaffold00154 267109 1 A G - Both SNP 0041.scaffold00154 268035 1 C T scaffold34972 ScafM SNP 0041.scaffold00154 268267 1 A T scaffold34972 ScafM SNP 0041.scaffold00154 268304 1 G T scaffold34972 ReadM SNP 0041.scaffold00154 268422 1 T A - ReadM INDEL 0041.scaffold00154 268464 2 AA .. - ScafM SNP 0041.scaffold00154 268961 1 C A scaffold34972 Both SNP 0041.scaffold00154 269050 1 C G scaffold34972 Both SNP 0041.scaffold00154 269341 1 T C scaffold34972 ScafM SNP 0041.scaffold00154 269479 1 C G scaffold34972 ScafM SNP 0041.scaffold00154 269835 1 T C scaffold34972 ScafM SNP 0041.scaffold00154 269843 1 T C scaffold34972 ScafM SNP 0041.scaffold00154 270001 1 T A scaffold34972 Both SNP 0041.scaffold00154 270521 1 C T scaffold34972 ScafM INDEL 0041.scaffold00154 270542 1 A . scaffold34972 ScafM INDEL 0041.scaffold00154 271120 1 T . scaffold34972 ScafM SNP 0041.scaffold00154 271144 1 T C scaffold34972 ScafM SNP 0041.scaffold00154 271727 1 T C scaffold34972 ReadM SNP 0041.scaffold00154 272333 1 G T - ReadM SNP 0041.scaffold00154 272367 1 C T - ReadM SNP 0041.scaffold00154 272665 1 G A - ReadM SNP 0041.scaffold00154 273149 1 A G - ReadM SNP 0041.scaffold00154 273420 1 A G - ReadM SNP 0041.scaffold00154 274182 1 C T - ReadM SNP 0041.scaffold00154 274184 1 A G - ReadM SNP 0041.scaffold00154 274324 1 C T - ReadM SNP 0041.scaffold00154 274365 1 A G - ReadM SNP 0041.scaffold00154 274756 1 A T - ReadM SNP 0041.scaffold00154 274959 1 C T - ReadM SNP 0041.scaffold00154 275136 1 T C - ReadM SNP 0041.scaffold00154 275634 1 C T - ReadM SNP 0041.scaffold00154 275650 1 C G - ReadM INDEL 0041.scaffold00154 275805 1 C . - ReadM SNP 0041.scaffold00154 276143 1 C G - ReadM INDEL 0041.scaffold00154 276330 1 . C - ReadM SNP 0041.scaffold00154 276649 1 G T - ReadM SNP 0041.scaffold00154 277696 1 C A - ReadM SNP 0041.scaffold00154 277790 1 G A - ReadM SNP 0041.scaffold00154 278688 1 T C - ReadM SNP 0041.scaffold00154 278901 1 A T - ReadM SNP 0041.scaffold00154 278948 1 T C - ReadM SNP 0041.scaffold00154 279406 1 A G - ReadM SNP 0041.scaffold00154 283513 1 T G - ReadM SNP 0041.scaffold00154 284110 1 T G - ReadM SNP 0041.scaffold00154 284268 1 A G - ReadM SNP 0041.scaffold00154 284709 1 T G - ReadM SNP 0041.scaffold00154 284957 1 G A - ReadM SNP 0041.scaffold00154 284963 1 T C - ReadM SNP 0041.scaffold00154 285246 1 T C - ReadM SNP 0041.scaffold00154 285451 1 C G - ReadM SNP 0041.scaffold00154 285656 1 T C - ReadM SNP 0041.scaffold00154 285822 1 A G - ReadM SNP 0041.scaffold00154 285958 1 G T - ReadM SNP 0041.scaffold00154 286242 1 C T - ReadM SNP 0041.scaffold00154 286755 1 A G - ReadM SNP 0041.scaffold00154 286786 1 A G - ReadM SNP 0041.scaffold00154 286829 1 T C - ReadM SNP 0041.scaffold00154 287530 1 G A - ReadM SNP 0041.scaffold00154 287552 1 G A - ReadM SNP 0041.scaffold00154 287768 1 A G - ReadM SNP 0041.scaffold00154 288308 1 A C - ReadM SNP 0041.scaffold00154 288314 1 T C - ReadM SNP 0041.scaffold00154 288486 1 A G - ReadM SNP 0041.scaffold00154 288767 1 G C - ReadM SNP 0041.scaffold00154 288853 1 C T - Both SNP 0041.scaffold00154 289285 1 C G scaffold2252 ScafM SNP 0041.scaffold00154 289366 1 A G scaffold2252 ScafM SNP 0041.scaffold00154 289390 1 T C scaffold2252 ScafM SNP 0041.scaffold00154 289400 1 C T scaffold2252 ReadM SNP 0041.scaffold00154 290405 1 A T - ReadM SNP 0041.scaffold00154 290707 1 T C - ReadM SNP 0041.scaffold00154 290829 1 G C - ReadM SNP 0041.scaffold00154 291183 1 C T - ReadM SNP 0041.scaffold00154 291202 1 T G - ReadM SNP 0041.scaffold00154 291322 1 C T - ReadM INDEL 0041.scaffold00154 291427 1 C . - ReadM SNP 0041.scaffold00154 292618 1 T C - ScafM SNP 0041.scaffold00154 295769 1 G C scaffold2252 ReadM SNP 0041.scaffold00154 297117 1 T C - ScafM SNP 0041.scaffold00154 297628 1 C T scaffold1886 ScafM SNP 0041.scaffold00154 297640 1 A T scaffold1886 ScafM SNP 0041.scaffold00154 297649 1 A G scaffold1886 ScafM SNP 0041.scaffold00154 297655 1 C T scaffold1886 ScafM INDEL 0041.scaffold00154 297693 1 C . scaffold1886 ReadM SNP 0041.scaffold00154 298868 1 G A - ReadM SNP 0041.scaffold00154 299976 1 A C - ReadM SNP 0041.scaffold00154 300010 1 G A - ReadM SNP 0041.scaffold00154 301053 1 G A - ReadM SNP 0041.scaffold00154 303950 1 C T - ReadM SNP 0041.scaffold00154 304151 1 A G - ReadM SNP 0041.scaffold00154 304365 1 T C - ReadM SNP 0041.scaffold00154 305445 1 G T - ReadM SNP 0041.scaffold00154 305803 1 A G - ReadM SNP 0041.scaffold00154 305949 1 C T - ReadM SNP 0041.scaffold00154 305966 1 C A - ScafM SNP 0041.scaffold00154 306180 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 306648 1 A T scaffold1398 ScafM SNP 0041.scaffold00154 306784 1 T G scaffold1398 Both SNP 0041.scaffold00154 306884 1 A G scaffold1398 Both SNP 0041.scaffold00154 307266 1 A G scaffold1398 Both SNP 0041.scaffold00154 307298 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 307466 1 A G scaffold1398 Both SNP 0041.scaffold00154 307605 1 T A scaffold1398 Both SNP 0041.scaffold00154 307797 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 308480 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 308626 1 T C scaffold1398 Both SNP 0041.scaffold00154 309609 1 C G scaffold1398 ScafM INDEL 0041.scaffold00154 310148 1 G . scaffold1398 ScafM SNP 0041.scaffold00154 310483 1 A G scaffold1398 Both SNP 0041.scaffold00154 310981 1 A G scaffold1398 Both SNP 0041.scaffold00154 311378 1 C G scaffold1398 ScafM SNP 0041.scaffold00154 311542 1 T C scaffold1398 ScafM INDEL 0041.scaffold00154 312048 1 A . scaffold1398 ScafM SNP 0041.scaffold00154 312380 1 G T scaffold1398 ScafM SNP 0041.scaffold00154 312445 1 T C scaffold1398 ScafM INDEL 0041.scaffold00154 315254 1 A . scaffold1398 ReadM SNP 0041.scaffold00154 315745 1 C T - ReadM SNP 0041.scaffold00154 316426 1 T A - ReadM SNP 0041.scaffold00154 316629 1 G A - ScafM SNP 0041.scaffold00154 317682 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 318274 1 C A scaffold1398 ScafM SNP 0041.scaffold00154 318379 2 CA TT scaffold1398 ScafM SNP 0041.scaffold00154 318470 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 318514 1 C G scaffold1398 ScafM SNP 0041.scaffold00154 318518 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 318553 1 G A scaffold1398 ScafM INDEL 0041.scaffold00154 318704 2 CA .. scaffold1398 ScafM INDEL 0041.scaffold00154 318707 1 C . scaffold1398 ScafM SNP 0041.scaffold00154 318732 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 318737 1 T C scaffold1398 ReadM SNP 0041.scaffold00154 319002 1 A C - ReadM SNP 0041.scaffold00154 319265 1 A G - ScafM INDEL 0041.scaffold00154 319371 2 AA .. scaffold25680 ScafM SNP 0041.scaffold00154 319394 1 G C scaffold25680 ReadM SNP 0041.scaffold00154 319718 1 T C - ScafM SNP 0041.scaffold00154 319718 2 TC CT scaffold1398 ScafM SNP 0041.scaffold00154 319755 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 319807 1 T C scaffold1398 ReadM INDEL 0041.scaffold00154 319827 1 . A - Both INDEL 0041.scaffold00154 319828 1 . G scaffold1398 ScafM SNP 0041.scaffold00154 319839 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 319886 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 319927 1 C A scaffold1398 ScafM SNP 0041.scaffold00154 319970 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 320124 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 320322 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 320370 1 T G scaffold1398 ScafM SNP 0041.scaffold00154 320403 1 C A scaffold1398 ScafM SNP 0041.scaffold00154 320461 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 320521 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 320676 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 320737 1 C G scaffold1398 ScafM SNP 0041.scaffold00154 320843 1 C T scaffold1398 ReadM SNP 0041.scaffold00154 321502 1 C G - ReadM SNP 0041.scaffold00154 322272 1 T A - ScafM SNP 0041.scaffold00154 324203 1 C G scaffold1398 ReadM INDEL 0041.scaffold00154 324823 1 A . - ScafM SNP 0041.scaffold00154 325052 1 T G scaffold1398 Both SNP 0041.scaffold00154 325312 1 A G scaffold1398 Both SNP 0041.scaffold00154 325338 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 325365 1 A C scaffold1398 ScafM INDEL 0041.scaffold00154 325506 2 .. TT scaffold1398 ScafM SNP 0041.scaffold00154 325561 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 325564 1 A C scaffold1398 ScafM SNP 0041.scaffold00154 325789 1 C A scaffold1398 ScafM INDEL 0041.scaffold00154 325994 68 .................................................................... AAAAAAAAAAAAAGGAGCAATTGATGAGCGAATTGAGAAATTCGAAGAATTGGAACGAAAAAAAAAGG scaffold1398 Both SNP 0041.scaffold00154 326275 1 C T scaffold1398 ReadM INDEL 0041.scaffold00154 327396 1 . T - ReadM INDEL 0041.scaffold00154 328422 1 . A - Both SNP 0041.scaffold00154 328914 1 T A scaffold1398 ScafM INDEL 0041.scaffold00154 329135 1 T . scaffold1398 ScafM SNP 0041.scaffold00154 329139 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 330137 1 G C scaffold1398 ReadM SNP 0041.scaffold00154 331631 1 T A - ScafM SNP 0041.scaffold00154 332117 1 G A scaffold1398 Both SNP 0041.scaffold00154 332195 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 332467 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 332720 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 333461 1 A G scaffold1398 ScafM INDEL 0041.scaffold00154 333568 1 . G scaffold1398 Both SNP 0041.scaffold00154 333644 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 335321 1 C T scaffold1398 ScafM INDEL 0041.scaffold00154 335534 1 C . scaffold1398 ScafM SNP 0041.scaffold00154 335760 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 335814 1 T G scaffold1398 Both SNP 0041.scaffold00154 336009 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 336046 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 336193 1 T C scaffold1398 Both SNP 0041.scaffold00154 336559 1 C T scaffold1398 ReadM SNP 0041.scaffold00154 337128 1 A G - ReadM SNP 0041.scaffold00154 337257 1 C A - ReadM SNP 0041.scaffold00154 337385 1 T A - ReadM SNP 0041.scaffold00154 337672 1 G A - ReadM SNP 0041.scaffold00154 337752 1 A G - ReadM INDEL 0041.scaffold00154 338490 1 T . - ReadM SNP 0041.scaffold00154 339670 1 G A - ReadM SNP 0041.scaffold00154 340099 1 A G - ReadM SNP 0041.scaffold00154 342385 1 A G - ReadM SNP 0041.scaffold00154 342979 1 G A - ReadM SNP 0041.scaffold00154 343561 1 G C - ReadM SNP 0041.scaffold00154 343598 1 A G - ReadM SNP 0041.scaffold00154 343767 1 T C - ReadM SNP 0041.scaffold00154 345889 1 T C - ReadM SNP 0041.scaffold00154 346227 1 C T - ReadM SNP 0041.scaffold00154 346896 1 C A - Both INDEL 0041.scaffold00154 347309 1 T . scaffold1398 ScafM SNP 0041.scaffold00154 347472 1 A C scaffold1398 ScafM SNP 0041.scaffold00154 347668 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 347675 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 347744 1 T C scaffold1398 ScafM INDEL 0041.scaffold00154 347814 1 . G scaffold1398 ScafM SNP 0041.scaffold00154 347841 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 347843 1 T C scaffold1398 Both SNP 0041.scaffold00154 347867 1 A C scaffold1398 ScafM SNP 0041.scaffold00154 347905 1 C T scaffold1398 ScafM INDEL 0041.scaffold00154 347913 28 ............................ CTCTTATTTTATTCAATGACTCATTACC scaffold1398 ScafM INDEL 0041.scaffold00154 347914 2 .. GT scaffold1398 ScafM INDEL 0041.scaffold00154 347916 6 ...... TATTTT scaffold1398 Both SNP 0041.scaffold00154 348169 1 C T scaffold1398 ReadM SNP 0041.scaffold00154 348436 1 T A - ReadM INDEL 0041.scaffold00154 348459 1 A . - ReadM SNP 0041.scaffold00154 348559 1 C A - ReadM SNP 0041.scaffold00154 353216 1 T G - ReadM SNP 0041.scaffold00154 353741 1 G A - Both SNP 0041.scaffold00154 353812 1 T C scaffold1398 Both SNP 0041.scaffold00154 354219 1 C G scaffold1398 ScafM SNP 0041.scaffold00154 354389 1 C G scaffold1398 Both SNP 0041.scaffold00154 354551 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 355046 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 355089 1 C T scaffold1398 ScafM INDEL 0041.scaffold00154 355196 1 . A scaffold1398 Both SNP 0041.scaffold00154 355440 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 355509 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 355759 1 C A scaffold1398 ScafM SNP 0041.scaffold00154 356549 1 G A scaffold1398 ScafM INDEL 0041.scaffold00154 356673 1 T . scaffold1398 ScafM SNP 0041.scaffold00154 356723 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 356736 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 356914 1 G C scaffold1398 ScafM INDEL 0041.scaffold00154 358661 5 ..... AAGGG scaffold1398 ScafM SNP 0041.scaffold00154 358880 1 C T scaffold1398 Both SNP 0041.scaffold00154 359449 1 G C scaffold1398 Both SNP 0041.scaffold00154 359633 1 T G scaffold1398 ScafM SNP 0041.scaffold00154 360289 1 A G scaffold1398 ScafM INDEL 0041.scaffold00154 361640 8 ........ CATGCCTC scaffold1398 ScafM INDEL 0041.scaffold00154 362006 6 ...... ATAACT scaffold1398 Both SNP 0041.scaffold00154 362477 1 A G scaffold1398 ScafM SNP 0041.scaffold00154 363614 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 363640 1 G C scaffold1398 Both SNP 0041.scaffold00154 363730 1 G A scaffold1398 Both SNP 0041.scaffold00154 364166 1 A T scaffold1398 ScafM INDEL 0041.scaffold00154 364917 2 .. TA scaffold1398 ScafM INDEL 0041.scaffold00154 364989 4 .... TACT scaffold1398 Both SNP 0041.scaffold00154 365352 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 366029 1 G T scaffold1398 Both SNP 0041.scaffold00154 366320 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 366520 1 T C scaffold1398 Both SNP 0041.scaffold00154 366619 1 T A scaffold1398 ScafM SNP 0041.scaffold00154 367044 1 A G scaffold1398 ScafM INDEL 0041.scaffold00154 367077 2 AA .. scaffold1398 ScafM SNP 0041.scaffold00154 367271 1 C A scaffold1398 ScafM SNP 0041.scaffold00154 367937 1 A G scaffold1398 ScafM INDEL 0041.scaffold00154 369032 2 AT .. scaffold1398 ScafM SNP 0041.scaffold00154 369282 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 370248 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 370543 1 G A scaffold1398 ScafM INDEL 0041.scaffold00154 370730 1 G . scaffold1398 ScafM SNP 0041.scaffold00154 371131 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 371223 1 G T scaffold1398 ReadM SNP 0041.scaffold00154 373666 1 A C - ScafM SNP 0041.scaffold00154 374816 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 375043 1 T G scaffold1398 ScafM SNP 0041.scaffold00154 375078 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 375597 1 G T scaffold1398 ScafM SNP 0041.scaffold00154 375603 1 A T scaffold1398 ScafM SNP 0041.scaffold00154 377259 1 G A scaffold1398 ScafM SNP 0041.scaffold00154 377355 1 A C scaffold1398 ScafM INDEL 0041.scaffold00154 377659 7 TGACGAA ....... scaffold1398 Both SNP 0041.scaffold00154 377796 1 A G scaffold1398 ScafM INDEL 0041.scaffold00154 378043 5 ..GAG TCTCT scaffold1398 ScafM SNP 0041.scaffold00154 378086 1 T C scaffold1398 ReadM SNP 0041.scaffold00154 378701 1 A T - ReadM SNP 0041.scaffold00154 379225 1 A T - ScafM SNP 0041.scaffold00154 379831 1 G T scaffold14146 Both SNP 0041.scaffold00154 379836 1 A G scaffold14146 ScafM SNP 0041.scaffold00154 379845 1 A G scaffold14146 ScafM SNP 0041.scaffold00154 379857 1 T C scaffold14146 ScafM SNP 0041.scaffold00154 379870 1 A G scaffold14146 ScafM SNP 0041.scaffold00154 379878 1 C T scaffold14146 ScafM SNP 0041.scaffold00154 379880 1 C T scaffold14146 ScafM SNP 0041.scaffold00154 379904 1 T C scaffold14146 ScafM SNP 0041.scaffold00154 379930 1 A G scaffold14146 ScafM SNP 0041.scaffold00154 379937 1 C T scaffold14146 ReadM SNP 0041.scaffold00154 380201 1 C G - ScafM INDEL 0041.scaffold00154 380531 1 . T scaffold1398 ScafM SNP 0041.scaffold00154 380533 1 A T scaffold1398 ScafM SNP 0041.scaffold00154 380646 1 T G scaffold1398 ScafM INDEL 0041.scaffold00154 380767 1 . T scaffold1398 ScafM INDEL 0041.scaffold00154 381226 66 .................................................................. TTTTTTTTTTTTTTCATGTTCTTGGCAGCATTACTTGGATAATCAGTGTGCTTTTCTTAATCTCTC scaffold1398 Both SNP 0041.scaffold00154 382027 1 G T scaffold1398 ScafM SNP 0041.scaffold00154 382121 1 G C scaffold1398 Both SNP 0041.scaffold00154 382845 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 383682 1 G C scaffold1398 ScafM SNP 0041.scaffold00154 383712 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 383862 1 T C scaffold1398 ReadM INDEL 0041.scaffold00154 385041 1 T . - ScafM INDEL 0041.scaffold00154 385041 2 TT .A scaffold1398 Both SNP 0041.scaffold00154 385180 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 385287 1 T C scaffold1398 Both SNP 0041.scaffold00154 385535 1 T G scaffold1398 ScafM SNP 0041.scaffold00154 385907 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 386738 1 T C scaffold1398 ScafM SNP 0041.scaffold00154 387016 1 C T scaffold1398 ScafM SNP 0041.scaffold00154 387483 1 G T scaffold37395 ScafM SNP 0041.scaffold00154 395119 1 G T scaffold69777 ScafM INDEL 0041.scaffold00154 395132 4 ATAG .... scaffold69777 ScafM SNP 0041.scaffold00154 395143 1 T A scaffold69777 ScafM SNP 0041.scaffold00154 395170 1 G A scaffold69777 ScafM SNP 0041.scaffold00154 395178 1 T C scaffold69777 ScafM SNP 0041.scaffold00154 397736 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 397768 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 397779 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 397783 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 397786 2 TT AC scaffold5292 ScafM SNP 0041.scaffold00154 397789 2 AA TC scaffold5292 ScafM SNP 0041.scaffold00154 397810 1 A G scaffold5292 ScafM INDEL 0041.scaffold00154 397823 1 A . scaffold5292 ScafM SNP 0041.scaffold00154 397835 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 397885 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 397898 1 C A scaffold5292 ScafM SNP 0041.scaffold00154 397904 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 398067 1 C A scaffold5292 ScafM INDEL 0041.scaffold00154 398084 1 . C scaffold5292 ScafM SNP 0041.scaffold00154 398090 2 GA AG scaffold5292 ScafM SNP 0041.scaffold00154 398099 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 398116 1 A C scaffold5292 ScafM SNP 0041.scaffold00154 398132 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 398163 1 G T scaffold5292 ScafM SNP 0041.scaffold00154 398253 1 A C scaffold5292 ScafM SNP 0041.scaffold00154 398269 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 398346 1 C G scaffold5292 ScafM SNP 0041.scaffold00154 398379 1 T G scaffold5292 ScafM SNP 0041.scaffold00154 398398 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 398435 1 G C scaffold5292 ScafM SNP 0041.scaffold00154 398464 1 C G scaffold5292 ScafM SNP 0041.scaffold00154 398469 1 T A scaffold5292 ScafM SNP 0041.scaffold00154 398475 1 T G scaffold5292 ScafM SNP 0041.scaffold00154 398514 2 TG CA scaffold5292 ScafM SNP 0041.scaffold00154 398530 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 398559 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 398609 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 398613 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 398617 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 398655 1 G A scaffold5292 Both SNP 0041.scaffold00154 398724 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 398728 1 T G scaffold5292 Both SNP 0041.scaffold00154 398848 1 G A scaffold5292 ScafM INDEL 0041.scaffold00154 398909 1 . T scaffold5292 ScafM SNP 0041.scaffold00154 398964 1 A C scaffold5292 ScafM SNP 0041.scaffold00154 398983 1 A C scaffold5292 Both SNP 0041.scaffold00154 398996 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 399044 3 CCC AAT scaffold5292 ScafM SNP 0041.scaffold00154 399059 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 399067 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 399105 1 A C scaffold5292 ScafM INDEL 0041.scaffold00154 399308 1 . G scaffold5292 Both SNP 0041.scaffold00154 399376 2 CC TT scaffold5292 ScafM SNP 0041.scaffold00154 399468 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 399510 1 C G scaffold5292 ScafM SNP 0041.scaffold00154 399518 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 399644 1 A C scaffold5292 Both SNP 0041.scaffold00154 399732 1 C A scaffold5292 ScafM INDEL 0041.scaffold00154 399815 41 ......................................... TCACCCAGGCAGGGAAACATTCTCAAGGTCGGCCTTTTGGC scaffold5292 ScafM SNP 0041.scaffold00154 399875 1 C G scaffold5292 ScafM SNP 0041.scaffold00154 399877 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 399879 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 399931 2 GT AC scaffold5292 ScafM SNP 0041.scaffold00154 400026 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 400136 1 G T scaffold5292 ScafM SNP 0041.scaffold00154 400287 1 T G scaffold5292 ScafM SNP 0041.scaffold00154 400310 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 400371 2 AA GT scaffold5292 ReadM SNP 0041.scaffold00154 402933 1 C G - ScafM INDEL 0041.scaffold00154 409948 1 A . scaffold24964 ScafM SNP 0041.scaffold00154 409967 1 G T scaffold24964 ScafM INDEL 0041.scaffold00154 409999 1 . T scaffold24964 ScafM SNP 0041.scaffold00154 410109 1 G T scaffold24964 ScafM SNP 0041.scaffold00154 410199 1 A G scaffold24964 ScafM SNP 0041.scaffold00154 410275 1 A G scaffold24964 ScafM SNP 0041.scaffold00154 410302 1 G T scaffold24964 ScafM INDEL 0041.scaffold00154 410335 1 T . scaffold24964 ScafM INDEL 0041.scaffold00154 410364 1 A . scaffold24964 ScafM SNP 0041.scaffold00154 410439 1 A C scaffold24964 ScafM SNP 0041.scaffold00154 410508 1 G T scaffold24964 ScafM SNP 0041.scaffold00154 410563 1 G A scaffold24964 ScafM SNP 0041.scaffold00154 410601 1 C T scaffold24964 ScafM INDEL 0041.scaffold00154 410646 5 ..... GTGGT scaffold24964 ScafM INDEL 0041.scaffold00154 412557 1 A . scaffold5442 ScafM SNP 0041.scaffold00154 412569 1 G A scaffold5442 ScafM SNP 0041.scaffold00154 412609 1 A C scaffold5442 ScafM SNP 0041.scaffold00154 412614 1 A C scaffold5442 ScafM INDEL 0041.scaffold00154 412667 3 GTT ... scaffold5442 ScafM SNP 0041.scaffold00154 412671 1 T C scaffold5442 ScafM SNP 0041.scaffold00154 412675 1 T C scaffold5442 ScafM SNP 0041.scaffold00154 412694 1 T G scaffold5442 ScafM INDEL 0041.scaffold00154 412715 2 TA .. scaffold5442 ScafM SNP 0041.scaffold00154 412719 1 T G scaffold5442 ScafM INDEL 0041.scaffold00154 412723 4 AAGA .... scaffold5442 ScafM INDEL 0041.scaffold00154 412730 1 G . scaffold5442 ScafM SNP 0041.scaffold00154 412736 1 C A scaffold5442 ScafM SNP 0041.scaffold00154 412748 1 C A scaffold5442 ScafM SNP 0041.scaffold00154 412750 1 G A scaffold5442 ScafM INDEL 0041.scaffold00154 412765 1 G . scaffold5442 ScafM SNP 0041.scaffold00154 412767 1 T A scaffold5442 ScafM SNP 0041.scaffold00154 412776 1 T G scaffold5442 ScafM SNP 0041.scaffold00154 412778 1 T G scaffold5442 ScafM SNP 0041.scaffold00154 412789 1 A C scaffold5442 ScafM SNP 0041.scaffold00154 412807 1 T C scaffold5442 ScafM SNP 0041.scaffold00154 412809 1 T C scaffold5442 ScafM SNP 0041.scaffold00154 412977 1 A C scaffold9767 ScafM SNP 0041.scaffold00154 412999 2 TC CA scaffold9767 ScafM SNP 0041.scaffold00154 413025 1 A T scaffold9767 ScafM SNP 0041.scaffold00154 413051 1 G A scaffold9767 ScafM SNP 0041.scaffold00154 413071 1 A G scaffold9767 ScafM SNP 0041.scaffold00154 413109 1 G A scaffold9767 ScafM SNP 0041.scaffold00154 413123 1 A C scaffold9767 ScafM SNP 0041.scaffold00154 413138 1 T G scaffold9767 ScafM SNP 0041.scaffold00154 413147 1 G A scaffold9767 ScafM SNP 0041.scaffold00154 413200 1 A G scaffold9767 ScafM SNP 0041.scaffold00154 413212 1 T G scaffold9767 ScafM INDEL 0041.scaffold00154 413234 1 . A scaffold9767 ScafM SNP 0041.scaffold00154 413303 1 T C scaffold9767 ScafM SNP 0041.scaffold00154 413310 1 A G scaffold9767 ScafM SNP 0041.scaffold00154 413324 1 C T scaffold9767 ScafM INDEL 0041.scaffold00154 413325 1 . G scaffold9767 ScafM SNP 0041.scaffold00154 413343 1 C T scaffold9767 ScafM SNP 0041.scaffold00154 413401 1 A G scaffold9767 ScafM SNP 0041.scaffold00154 413446 1 C T scaffold9767 ScafM INDEL 0041.scaffold00154 413486 3 GAC ... scaffold9767 ScafM SNP 0041.scaffold00154 413495 1 G T scaffold9767 ScafM SNP 0041.scaffold00154 413507 1 T A scaffold9767 ScafM SNP 0041.scaffold00154 413515 1 T C scaffold9767 ScafM SNP 0041.scaffold00154 413520 1 A G scaffold9767 ScafM SNP 0041.scaffold00154 413535 1 C T scaffold9767 ScafM SNP 0041.scaffold00154 413591 1 A T scaffold9767 ScafM SNP 0041.scaffold00154 413595 1 C T scaffold9767 ScafM SNP 0041.scaffold00154 413606 1 G A scaffold9767 ScafM SNP 0041.scaffold00154 417632 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 417672 1 G C scaffold5292 ScafM SNP 0041.scaffold00154 417710 1 G C scaffold5292 ScafM SNP 0041.scaffold00154 417712 1 T G scaffold5292 ScafM SNP 0041.scaffold00154 417741 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 417756 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 417804 1 C A scaffold5292 ScafM SNP 0041.scaffold00154 417807 1 A C scaffold5292 ScafM SNP 0041.scaffold00154 417833 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 417856 1 C T scaffold5292 ScafM INDEL 0041.scaffold00154 417873 1 . T scaffold5292 ScafM SNP 0041.scaffold00154 417878 1 C A scaffold5292 ScafM INDEL 0041.scaffold00154 418619 3 ... TTT scaffold5292 ScafM SNP 0041.scaffold00154 418667 1 G A scaffold5292 ScafM INDEL 0041.scaffold00154 418689 7 ....... ATAATAT scaffold5292 ScafM SNP 0041.scaffold00154 418716 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 418754 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 418756 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 418779 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 418961 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 419000 1 C A scaffold5292 ScafM SNP 0041.scaffold00154 419036 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419068 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 419085 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 419137 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 419148 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419168 2 AC GG scaffold5292 ScafM SNP 0041.scaffold00154 419180 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 419196 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419209 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419253 1 C T scaffold5292 ScafM INDEL 0041.scaffold00154 419273 3 GGC ... scaffold5292 ScafM SNP 0041.scaffold00154 419301 3 TGG AAA scaffold5292 ScafM INDEL 0041.scaffold00154 419318 1 A . scaffold5292 ScafM SNP 0041.scaffold00154 419413 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419417 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 419435 1 T C scaffold5292 ScafM INDEL 0041.scaffold00154 419438 1 T . scaffold5292 ScafM SNP 0041.scaffold00154 419463 1 C T scaffold5292 ScafM SNP 0041.scaffold00154 419598 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 419601 1 T C scaffold5292 ScafM INDEL 0041.scaffold00154 419612 2 AG .. scaffold5292 ScafM SNP 0041.scaffold00154 419615 1 G T scaffold5292 ScafM SNP 0041.scaffold00154 419653 1 A C scaffold5292 ScafM SNP 0041.scaffold00154 419716 1 G A scaffold5292 ScafM SNP 0041.scaffold00154 419741 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 419747 1 T A scaffold5292 ScafM SNP 0041.scaffold00154 419753 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 419773 3 ATT GAA scaffold5292 ScafM SNP 0041.scaffold00154 419787 1 A G scaffold5292 ScafM SNP 0041.scaffold00154 419803 1 G T scaffold5292 ScafM SNP 0041.scaffold00154 419811 2 CT AC scaffold5292 ScafM SNP 0041.scaffold00154 419814 1 T C scaffold5292 ScafM SNP 0041.scaffold00154 428513 1 G T scaffold48876 ScafM SNP 0041.scaffold00154 428567 1 G C scaffold48876 ScafM SNP 0041.scaffold00154 428879 1 A G scaffold48876 ScafM INDEL 0041.scaffold00154 428955 32 ................................ CGACACACAAGGAAAGACGCGGTGGGGAAGAA scaffold48876 ScafM SNP 0041.scaffold00154 429132 1 A C scaffold48876 ScafM SNP 0041.scaffold00154 445630 2 AT TC scaffold7919 ScafM SNP 0041.scaffold00154 453615 1 T C scaffold7919 ScafM SNP 0041.scaffold00154 453695 1 G C scaffold7919 ScafM SNP 0041.scaffold00154 453701 1 C T scaffold7919 ScafM SNP 0041.scaffold00154 453712 1 A G scaffold7919 ScafM INDEL 0041.scaffold00154 453741 1 T . scaffold7919 ScafM SNP 0041.scaffold00154 453758 1 T G scaffold7919 ScafM SNP 0041.scaffold00154 453790 1 A G scaffold7919 ScafM SNP 0041.scaffold00154 453828 1 T C scaffold7919 ScafM SNP 0041.scaffold00154 453832 1 G T scaffold7919 ScafM SNP 0041.scaffold00154 453848 1 C A scaffold7919 ScafM SNP 0041.scaffold00154 453852 1 G A scaffold7919 ScafM INDEL 0041.scaffold00154 455697 1 . T scaffold33336 ScafM SNP 0041.scaffold00154 455699 1 G C scaffold33336 ScafM SNP 0041.scaffold00154 455719 2 AG CT scaffold33336 ScafM SNP 0041.scaffold00154 455761 1 A G scaffold33336 ScafM SNP 0041.scaffold00154 455792 1 T A scaffold33336 ScafM SNP 0041.scaffold00154 455817 1 C T scaffold33336 ScafM INDEL 0041.scaffold00154 455820 4 .... TGTC scaffold33336 ScafM SNP 0041.scaffold00154 455822 1 C G scaffold33336 ScafM INDEL 0041.scaffold00154 455823 7 ....... CCTCATC scaffold33336 ScafM INDEL 0041.scaffold00154 455826 2 .. CA scaffold33336 ScafM INDEL 0041.scaffold00154 455827 1 . G scaffold33336 ScafM INDEL 0041.scaffold00154 455830 4 .... GGTT scaffold33336 ScafM INDEL 0041.scaffold00154 455831 4 .... AGCG scaffold33336 ScafM INDEL 0041.scaffold00154 455832 3 ... AAA scaffold33336 ScafM INDEL 0041.scaffold00154 456026 31 TTCCCCTCGAAAAAAAAAAAATTATTCCATA ............................... scaffold33336 ScafM INDEL 0041.scaffold00154 456779 37 ..................................... ATGTGGCCTGCATCGTGTGTTTCACTTTGACACGACC scaffold33336 ScafM INDEL 0041.scaffold00154 469228 19 TTTTGGCAAAAGTAGAGCG ................... scaffold20995 ReadM SNP 0041.scaffold00154 474362 1 T C - ReadM SNP 0041.scaffold00154 474379 1 G A - ScafM SNP 0041.scaffold00154 477194 2 TC AT scaffold20995 ScafM SNP 0041.scaffold00154 477202 1 A C scaffold20995 ScafM INDEL 0041.scaffold00154 477632 3 ... AGA scaffold66974 ScafM SNP 0041.scaffold00154 477635 1 T G scaffold66974 ScafM INDEL 0041.scaffold00154 477636 5 ..... GGGAT scaffold66974 ScafM INDEL 0041.scaffold00154 477644 1 A . scaffold66974 ScafM SNP 0041.scaffold00154 484513 1 T G scaffold29397 ScafM SNP 0041.scaffold00154 484969 1 G A scaffold29397 ScafM SNP 0041.scaffold00154 485978 1 G A scaffold29397 ScafM SNP 0041.scaffold00154 485980 1 G A scaffold29397 ScafM SNP 0041.scaffold00154 486407 1 G T scaffold29397 ScafM SNP 0041.scaffold00154 486412 1 C T scaffold29397 ReadM SNP 0041.scaffold00154 486627 1 C T - ScafM INDEL 0041.scaffold00154 487772 15 ............... AGGGTTGGGTTCCTA scaffold29397 ScafM SNP 0041.scaffold00154 488237 1 A G scaffold29397 ScafM INDEL 0041.scaffold00154 488259 1 T . scaffold29397 ScafM SNP 0041.scaffold00154 488318 1 A T scaffold29397 ScafM SNP 0041.scaffold00154 488321 1 T C scaffold29397 ReadM SNP 0041.scaffold00154 491217 1 A T - ScafM SNP 0041.scaffold00154 493545 2 TA CG scaffold44026 ScafM SNP 0041.scaffold00154 493556 1 G A scaffold44026 ScafM SNP 0041.scaffold00154 493558 1 T C scaffold44026 ScafM SNP 0041.scaffold00154 493605 1 G A scaffold44026 ScafM SNP 0041.scaffold00154 493994 1 A T scaffold44026 ScafM SNP 0041.scaffold00154 494024 1 G A scaffold44026 ScafM SNP 0041.scaffold00154 494026 1 T G scaffold44026 ScafM SNP 0041.scaffold00154 494029 1 T C scaffold44026 ScafM SNP 0041.scaffold00154 494193 1 C A scaffold44026 ScafM INDEL 0041.scaffold00154 494198 1 . C scaffold44026 ScafM SNP 0041.scaffold00154 494211 1 C T scaffold44026 ScafM SNP 0041.scaffold00154 494213 1 T C scaffold44026 ScafM INDEL 0041.scaffold00154 494226 1 . C scaffold44026 ScafM SNP 0041.scaffold00154 494258 1 C T scaffold44026 ScafM SNP 0041.scaffold00154 494260 1 T A scaffold44026 ScafM SNP 0041.scaffold00154 494267 1 T C scaffold44026 ScafM SNP 0041.scaffold00154 494297 1 A G scaffold44026 ScafM SNP 0041.scaffold00154 494367 1 G T scaffold44026 ScafM SNP 0041.scaffold00154 494373 1 A G scaffold44026 ScafM SNP 0041.scaffold00154 494410 2 CA GG scaffold44026 ScafM SNP 0041.scaffold00154 494423 1 C T scaffold44026 ScafM SNP 0041.scaffold00154 494448 1 C G scaffold44026 ScafM SNP 0041.scaffold00154 494522 1 C G scaffold44026 ScafM INDEL 0041.scaffold00154 494812 1 A . scaffold66483 ScafM SNP 0041.scaffold00154 494821 1 T C scaffold66483 ScafM SNP 0041.scaffold00154 494845 1 A G scaffold66483 ScafM INDEL 0041.scaffold00154 494918 11 ........... TTATAGAAGAG scaffold66483 ScafM SNP 0041.scaffold00154 494964 1 G T scaffold66483 ScafM SNP 0041.scaffold00154 495029 1 A T scaffold66483 ScafM SNP 0041.scaffold00154 495483 1 A T scaffold44026 ScafM SNP 0041.scaffold00154 495494 1 G T scaffold44026 ScafM SNP 0041.scaffold00154 495503 1 T C scaffold44026 ScafM SNP 0041.scaffold00154 495529 1 G A scaffold44026 ScafM SNP 0041.scaffold00154 495557 1 T A scaffold44026 ScafM SNP 0041.scaffold00154 495565 1 C T scaffold44026 ScafM SNP 0041.scaffold00154 495591 1 G T scaffold44026 ScafM SNP 0041.scaffold00154 495621 1 A G scaffold44026 ScafM SNP 0041.scaffold00154 495694 2 TT CC scaffold44026 ScafM SNP 0041.scaffold00154 495739 1 G T scaffold44026 ScafM INDEL 0041.scaffold00154 495777 6 TTGAAC ...... scaffold44026 Both SNP 0041.scaffold00154 496655 1 A G scaffold44026 ScafM SNP 0041.scaffold00154 496778 1 G C scaffold44026 ScafM INDEL 0041.scaffold00154 496818 1 . T scaffold44026 Both SNP 0041.scaffold00154 496870 1 G A scaffold44026 ScafM SNP 0041.scaffold00154 497206 1 G T scaffold44026 ScafM SNP 0041.scaffold00154 498335 1 A G scaffold1624 ScafM SNP 0041.scaffold00154 498347 1 A C scaffold1624 ScafM INDEL 0041.scaffold00154 498468 2 .. AA scaffold1624 ScafM INDEL 0041.scaffold00154 498971 4 TACG .... scaffold1624 ScafM SNP 0041.scaffold00154 499014 1 C T scaffold1624 Both SNP 0041.scaffold00154 499066 1 A T scaffold1624 ScafM SNP 0041.scaffold00154 499142 1 G T scaffold1624 ScafM INDEL 0041.scaffold00154 499153 4 .... TCGG scaffold1624 ScafM SNP 0041.scaffold00154 499236 1 T G scaffold1624 ScafM INDEL 0041.scaffold00154 499247 1 C . scaffold1624 ScafM SNP 0041.scaffold00154 499252 1 C T scaffold1624 ScafM SNP 0041.scaffold00154 499290 1 A C scaffold1624 ReadM INDEL 0041.scaffold00154 499569 1 . T - ReadM SNP 0041.scaffold00154 499582 1 T G - ReadM SNP 0041.scaffold00154 499749 1 A C - Both SNP 0041.scaffold00154 500067 1 G C scaffold1624 ScafM SNP 0041.scaffold00154 500128 1 C G scaffold1624 ScafM SNP 0041.scaffold00154 500199 1 A C scaffold1624 Both SNP 0041.scaffold00154 500312 1 T C scaffold1624 ScafM SNP 0041.scaffold00154 500720 1 T A scaffold1624 ScafM INDEL 0041.scaffold00154 500953 4 .... TAAC scaffold1624 ScafM INDEL 0041.scaffold00154 501013 1 . T scaffold1624 ScafM SNP 0041.scaffold00154 501043 1 G C scaffold1624 ScafM SNP 0041.scaffold00154 501046 1 T G scaffold1624 ScafM SNP 0041.scaffold00154 501049 1 T G scaffold1624 ScafM SNP 0041.scaffold00154 501065 1 T C scaffold1624 ScafM SNP 0041.scaffold00154 501069 1 T C scaffold1624 ScafM SNP 0041.scaffold00154 501080 2 AT GC scaffold1624 ScafM INDEL 0041.scaffold00154 501102 1 . C scaffold1624 ScafM SNP 0041.scaffold00154 501370 1 G C scaffold48014 ScafM SNP 0041.scaffold00154 501421 1 G A scaffold48014 ScafM SNP 0041.scaffold00154 501426 1 T G scaffold48014 ScafM INDEL 0041.scaffold00154 501435 7 ....... TTAGGAC scaffold48014 ScafM SNP 0041.scaffold00154 501481 1 C T scaffold48014 ScafM SNP 0041.scaffold00154 501484 1 C T scaffold48014 Both SNP 0041.scaffold00154 501653 1 A T scaffold48014 Both SNP 0041.scaffold00154 501719 1 T A scaffold48014 Both SNP 0041.scaffold00154 501723 1 A C scaffold48014 ScafM SNP 0041.scaffold00154 501779 1 C T scaffold48014 ScafM INDEL 0041.scaffold00154 501950 3 ... AAG scaffold48014 ScafM INDEL 0041.scaffold00154 501981 1 . A scaffold48014 ScafM SNP 0041.scaffold00154 501995 1 G A scaffold48014 ScafM INDEL 0041.scaffold00154 502024 17 ................. AGTACTCTTCACATACT scaffold48014 ScafM SNP 0041.scaffold00154 502361 1 T C scaffold48014 ScafM SNP 0041.scaffold00154 502364 1 C T scaffold48014 ScafM SNP 0041.scaffold00154 502889 1 T C scaffold1624 ScafM INDEL 0041.scaffold00154 502922 9 ACTCATATG ......... scaffold1624 ScafM SNP 0041.scaffold00154 502966 1 T A scaffold1624 ScafM SNP 0041.scaffold00154 503083 1 C A scaffold1624 ScafM SNP 0041.scaffold00154 503161 1 A G scaffold1624 ScafM SNP 0041.scaffold00154 503255 1 A G scaffold48014 ScafM SNP 0041.scaffold00154 503333 1 G A scaffold48014 ScafM SNP 0041.scaffold00154 503501 1 T C scaffold48014 ScafM SNP 0041.scaffold00154 503516 1 A G scaffold48014 ScafM SNP 0041.scaffold00154 503744 1 C G scaffold48014 ScafM SNP 0041.scaffold00154 504120 1 C A scaffold8940 ScafM SNP 0041.scaffold00154 504124 1 T A scaffold8940 ScafM SNP 0041.scaffold00154 504159 1 T A scaffold8940 ReadM SNP 0041.scaffold00154 505225 1 A G - ReadM SNP 0041.scaffold00154 505367 1 G A - ScafM INDEL 0041.scaffold00154 505397 1 T . scaffold48014 ScafM INDEL 0041.scaffold00154 505408 2 CT .. scaffold48014 ScafM SNP 0041.scaffold00154 505580 1 C A scaffold48014 ScafM SNP 0041.scaffold00154 505584 1 G T scaffold48014 ScafM INDEL 0041.scaffold00154 505585 2 .. TT scaffold48014 ScafM INDEL 0041.scaffold00154 505619 3 .CC TAA scaffold48014 Both SNP 0041.scaffold00154 505759 1 C T scaffold48014 ScafM SNP 0041.scaffold00154 505838 1 A T scaffold48014 ScafM SNP 0041.scaffold00154 505845 1 C A scaffold48014 Both SNP 0041.scaffold00154 505856 1 T A scaffold48014 Both SNP 0041.scaffold00154 505995 1 C A scaffold48014 ReadM SNP 0041.scaffold00154 506072 1 G A - ReadM SNP 0041.scaffold00154 506086 1 T G - ScafM SNP 0041.scaffold00154 506175 1 C G scaffold48014 ScafM SNP 0041.scaffold00154 506220 1 T C scaffold48014 ReadM SNP 0041.scaffold00154 506371 1 A G - ScafM SNP 0041.scaffold00154 506499 1 C G scaffold48014 ScafM INDEL 0041.scaffold00154 506517 1 . A scaffold48014 ScafM SNP 0041.scaffold00154 506531 1 G A scaffold48014 ScafM SNP 0041.scaffold00154 506631 1 A C scaffold48014 ScafM SNP 0041.scaffold00154 506787 1 G A scaffold48014 ScafM SNP 0041.scaffold00154 506829 2 TA CT scaffold48014 ScafM SNP 0041.scaffold00154 506875 1 C T scaffold48014 ScafM INDEL 0041.scaffold00154 507234 1 . G scaffold48014 ScafM SNP 0041.scaffold00154 507331 1 T C scaffold48014 ScafM SNP 0041.scaffold00154 507351 1 C T scaffold48014 ScafM INDEL 0041.scaffold00154 507370 1 . T scaffold48014 ScafM INDEL 0041.scaffold00154 507530 1 . T scaffold48014 ScafM SNP 0041.scaffold00154 507545 1 T A scaffold48014 ScafM INDEL 0041.scaffold00154 507559 3 ... TAA scaffold48014 ScafM SNP 0041.scaffold00154 507588 1 A G scaffold48014 Both SNP 0041.scaffold00154 507708 1 C G scaffold48014 ScafM SNP 0041.scaffold00154 507757 2 CA AC scaffold48014 Both SNP 0041.scaffold00154 507841 1 A G scaffold48014 ScafM SNP 0041.scaffold00154 508088 2 TT CA scaffold48014 ScafM SNP 0041.scaffold00154 508093 1 A G scaffold48014 ScafM SNP 0041.scaffold00154 508096 1 C T scaffold48014 ScafM SNP 0041.scaffold00154 508109 1 A G scaffold48014 ReadM SNP 0041.scaffold00154 508273 1 C T - ScafM SNP 0041.scaffold00154 508697 1 A G scaffold48014 ScafM SNP 0041.scaffold00154 508732 2 AG TA scaffold48014 ReadM SNP 0041.scaffold00154 508864 1 C A - ReadM SNP 0041.scaffold00154 509166 1 G A - ReadM SNP 0041.scaffold00154 509176 1 C T - ReadM SNP 0041.scaffold00154 509512 1 G A - ReadM SNP 0041.scaffold00154 510141 1 G A - ReadM SNP 0041.scaffold00154 510890 1 C T - ReadM SNP 0041.scaffold00154 510927 1 T G - ReadM SNP 0041.scaffold00154 511041 1 C T - ReadM SNP 0041.scaffold00154 511194 1 C T - ReadM SNP 0041.scaffold00154 511246 1 G C - ReadM SNP 0041.scaffold00154 523089 1 T G - ReadM SNP 0041.scaffold00154 523145 1 T C - ReadM SNP 0041.scaffold00154 523150 1 T G - ScafM SNP 0041.scaffold00154 524069 1 C G scaffold62277 ScafM SNP 0041.scaffold00154 524102 1 A T scaffold62277 ScafM INDEL 0041.scaffold00154 524211 5 TAATT ..... scaffold62277 ScafM SNP 0041.scaffold00154 524220 1 C T scaffold62277 ScafM SNP 0041.scaffold00154 524252 1 C G scaffold62277 ScafM SNP 0041.scaffold00154 524263 1 G A scaffold62277 ScafM SNP 0041.scaffold00154 524289 1 T C scaffold62277 ScafM SNP 0041.scaffold00154 524567 1 T C scaffold7776 ScafM SNP 0041.scaffold00154 524580 1 A G scaffold7776 ScafM SNP 0041.scaffold00154 526186 1 T A scaffold2573 ScafM SNP 0041.scaffold00154 526197 1 T G scaffold2573 ScafM SNP 0041.scaffold00154 526199 1 G T scaffold2573 ScafM SNP 0041.scaffold00154 526204 1 G A scaffold2573 ScafM SNP 0041.scaffold00154 526209 1 C A scaffold2573 ScafM SNP 0041.scaffold00154 526256 1 G A scaffold2573 ScafM SNP 0041.scaffold00154 526269 1 A G scaffold2573 ScafM SNP 0041.scaffold00154 526282 1 A C scaffold2573 ScafM SNP 0041.scaffold00154 526300 1 A C scaffold2573 ScafM SNP 0041.scaffold00154 526306 1 T G scaffold2573 ScafM SNP 0041.scaffold00154 526363 1 T C scaffold2573 ScafM SNP 0041.scaffold00154 526376 1 C A scaffold2573 ScafM INDEL 0041.scaffold00154 526383 1 T . scaffold2573 ScafM SNP 0041.scaffold00154 526404 1 C T scaffold2573 ReadM SNP 0041.scaffold00154 534030 1 G A - ReadM SNP 0041.scaffold00154 534081 1 T C - ReadM SNP 0041.scaffold00154 536172 1 C T - ReadM SNP 0041.scaffold00154 536199 1 T G - ReadM INDEL 0041.scaffold00154 536212 1 . C - ReadM SNP 0041.scaffold00154 536334 1 A G - ReadM SNP 0041.scaffold00154 536598 1 T A - ReadM SNP 0041.scaffold00154 536669 1 G T - ReadM SNP 0041.scaffold00154 536683 1 T C - ReadM SNP 0041.scaffold00154 537001 1 C T - ReadM INDEL 0041.scaffold00154 537010 1 . G - ReadM SNP 0041.scaffold00154 537432 1 G C - ReadM SNP 0041.scaffold00154 537556 1 G A - ReadM SNP 0041.scaffold00154 537564 1 T C - ReadM SNP 0041.scaffold00154 537935 1 T G - ReadM SNP 0041.scaffold00154 537956 1 C T - ReadM SNP 0041.scaffold00154 538615 1 A G - ReadM SNP 0041.scaffold00154 538731 1 G T - Both SNP 0041.scaffold00154 538786 1 G C scaffold6492 Both SNP 0041.scaffold00154 538841 1 A G scaffold6492 ScafM SNP 0041.scaffold00154 538851 1 C T scaffold6492 ReadM SNP 0041.scaffold00154 538960 1 C T - ReadM SNP 0041.scaffold00154 538995 1 G A - Both SNP 0041.scaffold00154 539238 1 T C scaffold6492 Both SNP 0041.scaffold00154 539279 1 A C scaffold6492 Both SNP 0041.scaffold00154 539371 1 T C scaffold6492 Both SNP 0041.scaffold00154 539487 1 A G scaffold6492 Both SNP 0041.scaffold00154 539498 1 A G scaffold6492 Both SNP 0041.scaffold00154 539634 1 A G scaffold6492 Both SNP 0041.scaffold00154 539756 1 A G scaffold6492 Both SNP 0041.scaffold00154 539796 1 G A scaffold6492 Both SNP 0041.scaffold00154 539891 1 A C scaffold6492 ScafM SNP 0041.scaffold00154 539940 1 T C scaffold6492 ReadM SNP 0041.scaffold00154 540018 1 T A - ScafM SNP 0041.scaffold00154 540068 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 540077 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 540101 1 A G scaffold6492 Both SNP 0041.scaffold00154 540320 1 C T scaffold6492 Both SNP 0041.scaffold00154 540334 1 C T scaffold6492 Both SNP 0041.scaffold00154 540344 1 C G scaffold6492 ScafM SNP 0041.scaffold00154 540433 1 T G scaffold6492 ScafM SNP 0041.scaffold00154 540451 1 C A scaffold6492 ScafM SNP 0041.scaffold00154 540528 1 A G scaffold6492 ScafM SNP 0041.scaffold00154 540633 1 G C scaffold6492 ScafM SNP 0041.scaffold00154 540726 1 G C scaffold6492 Both SNP 0041.scaffold00154 540785 1 A T scaffold6492 ScafM SNP 0041.scaffold00154 540897 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 540908 1 A T scaffold6492 Both SNP 0041.scaffold00154 540923 1 T A scaffold6492 ScafM SNP 0041.scaffold00154 540991 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 541019 1 A G scaffold6492 ScafM INDEL 0041.scaffold00154 541027 3 ... AAA scaffold6492 ScafM INDEL 0041.scaffold00154 541036 3 AAA ... scaffold6492 ScafM SNP 0041.scaffold00154 541130 1 A C scaffold6492 ScafM SNP 0041.scaffold00154 541188 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 541193 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 541216 1 T C scaffold6492 Both INDEL 0041.scaffold00154 541338 1 C . scaffold6492 ScafM SNP 0041.scaffold00154 541401 1 C T scaffold6492 ScafM SNP 0041.scaffold00154 541406 1 A G scaffold6492 Both SNP 0041.scaffold00154 541519 1 A G scaffold6492 ScafM SNP 0041.scaffold00154 541557 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 541569 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 541610 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 541678 1 T A scaffold6492 ScafM SNP 0041.scaffold00154 541732 1 T A scaffold6492 ScafM SNP 0041.scaffold00154 541765 1 C A scaffold6492 ScafM SNP 0041.scaffold00154 541784 1 T C scaffold6492 ReadM SNP 0041.scaffold00154 541856 1 C T - ReadM SNP 0041.scaffold00154 541872 1 A T - ReadM SNP 0041.scaffold00154 542375 1 G A - ReadM SNP 0041.scaffold00154 542416 1 T A - ReadM SNP 0041.scaffold00154 542446 1 G T - ReadM SNP 0041.scaffold00154 542923 1 G T - ReadM SNP 0041.scaffold00154 542961 1 A G - ReadM SNP 0041.scaffold00154 542984 1 A G - ReadM SNP 0041.scaffold00154 543243 1 A T - ReadM SNP 0041.scaffold00154 543297 1 T C - Both SNP 0041.scaffold00154 543338 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 543491 1 C T scaffold6492 ScafM SNP 0041.scaffold00154 543507 1 C T scaffold6492 ScafM SNP 0041.scaffold00154 543519 1 C T scaffold6492 ScafM SNP 0041.scaffold00154 543544 1 T G scaffold6492 Both SNP 0041.scaffold00154 543653 1 T C scaffold6492 Both SNP 0041.scaffold00154 543683 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 543708 1 A C scaffold6492 Both SNP 0041.scaffold00154 543756 1 A G scaffold6492 Both SNP 0041.scaffold00154 543803 1 G C scaffold6492 ScafM SNP 0041.scaffold00154 543846 1 C G scaffold6492 ScafM SNP 0041.scaffold00154 543905 2 TC GT scaffold6492 ScafM SNP 0041.scaffold00154 543936 1 A G scaffold6492 ScafM SNP 0041.scaffold00154 543986 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 544023 1 G A scaffold6492 ScafM SNP 0041.scaffold00154 544085 1 T C scaffold6492 ScafM SNP 0041.scaffold00154 544090 2 CG TA scaffold6492 ScafM SNP 0041.scaffold00154 544217 1 G A scaffold6492 ScafM INDEL 0041.scaffold00154 544226 1 . G scaffold6492 ScafM SNP 0041.scaffold00154 548574 1 A C scaffold51866 ScafM SNP 0041.scaffold00154 548608 1 A T scaffold51866 Both SNP 0041.scaffold00154 548633 1 A G scaffold51866 Both SNP 0041.scaffold00154 548649 1 G T scaffold51866 ScafM SNP 0041.scaffold00154 548711 1 C A scaffold51866 ScafM SNP 0041.scaffold00154 548742 1 C G scaffold51866 ScafM SNP 0041.scaffold00154 548826 1 T C scaffold51866 ScafM SNP 0041.scaffold00154 548843 1 A G scaffold51866 ScafM INDEL 0041.scaffold00154 548873 1 . A scaffold51866 ScafM SNP 0041.scaffold00154 548887 1 C T scaffold51866 ScafM INDEL 0041.scaffold00154 548908 66 GTCCCATCTGTCGCTGCCTCTGGGCACAGGTGGATTCTCGATAGAGAACCGGGGGAGGGATCTGTC .................................................................. scaffold51866 ScafM INDEL 0041.scaffold00154 548975 2 CG .. scaffold51866 ScafM SNP 0041.scaffold00154 549077 1 A T scaffold51866 ScafM SNP 0041.scaffold00154 549085 1 A T scaffold51866 ScafM SNP 0041.scaffold00154 549137 1 A G scaffold51866 Both SNP 0041.scaffold00154 549163 1 T A scaffold51866 Both INDEL 0041.scaffold00154 549192 1 A . scaffold51866 Both SNP 0041.scaffold00154 549450 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549630 1 C T scaffold51866 ScafM SNP 0041.scaffold00154 549635 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549641 1 G A scaffold51866 ScafM SNP 0041.scaffold00154 549735 1 C T scaffold51866 ScafM SNP 0041.scaffold00154 549743 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549781 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549821 1 G C scaffold51866 ScafM SNP 0041.scaffold00154 549825 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549863 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 549900 1 C G scaffold51866 Both INDEL 0041.scaffold00154 549979 1 T . scaffold51866 ScafM SNP 0041.scaffold00154 549982 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 550045 1 A G scaffold51866 ScafM SNP 0041.scaffold00154 550067 1 A C scaffold51866 ScafM SNP 0041.scaffold00154 550086 1 C T scaffold51866 ScafM SNP 0041.scaffold00154 550208 1 T A scaffold51866 ScafM SNP 0041.scaffold00154 550210 1 G T scaffold51866 ScafM SNP 0041.scaffold00154 550232 1 A G scaffold51866 ReadM SNP 0041.scaffold00154 550290 1 C T - ReadM SNP 0041.scaffold00154 550298 1 C T - ReadM SNP 0041.scaffold00154 550653 1 C T - ReadM SNP 0041.scaffold00154 550682 1 C T - ReadM SNP 0041.scaffold00154 550701 1 A G - ReadM INDEL 0041.scaffold00154 550957 1 G . - ScafM SNP 0041.scaffold00154 551763 1 T C scaffold67330 ScafM SNP 0041.scaffold00154 551874 1 C G scaffold67330 ScafM SNP 0041.scaffold00154 552070 1 T A scaffold67330 ScafM SNP 0041.scaffold00154 552097 1 T A scaffold67330 ScafM SNP 0041.scaffold00154 552124 1 T A scaffold67330 ScafM SNP 0041.scaffold00154 552134 1 A T scaffold67330 ScafM SNP 0041.scaffold00154 552165 1 C T scaffold67330 ScafM SNP 0041.scaffold00154 552221 1 C T scaffold67330 ScafM SNP 0041.scaffold00154 552228 1 C T scaffold67330 ScafM SNP 0041.scaffold00154 552390 1 A G scaffold67330 ScafM SNP 0041.scaffold00154 552403 1 G C scaffold67330 ScafM SNP 0041.scaffold00154 552497 1 A G scaffold67330 ScafM INDEL 0041.scaffold00154 552501 1 . T scaffold67330 Both SNP 0041.scaffold00154 552571 1 G A scaffold67330 Both INDEL 0041.scaffold00154 552615 1 A . scaffold67330 ScafM INDEL 0041.scaffold00154 552771 5 ..... ATAAA scaffold67330 ScafM SNP 0041.scaffold00154 552849 1 T C scaffold67330 Both INDEL 0041.scaffold00154 552891 1 . A scaffold67330 ScafM SNP 0041.scaffold00154 552893 1 G C scaffold67330 ScafM SNP 0041.scaffold00154 553110 1 G C scaffold67330 ScafM INDEL 0041.scaffold00154 553111 5 ....A TTTGC scaffold67330 ScafM SNP 0041.scaffold00154 553125 2 CA TG scaffold67330 ScafM SNP 0041.scaffold00154 553209 1 C A scaffold67330 ScafM SNP 0041.scaffold00154 553228 1 A G scaffold67330 ScafM SNP 0041.scaffold00154 553272 1 A G scaffold67330 ReadM INDEL 0041.scaffold00154 553438 1 A . - ReadM SNP 0041.scaffold00154 554068 1 T A - ReadM SNP 0041.scaffold00154 554090 1 C A - ReadM SNP 0041.scaffold00154 554156 1 A G - ReadM SNP 0041.scaffold00154 554183 1 C A - ReadM SNP 0041.scaffold00154 554908 1 C T - ReadM SNP 0041.scaffold00154 555273 1 C T - ReadM INDEL 0041.scaffold00154 555341 1 C . - ReadM SNP 0041.scaffold00154 555752 1 A G - ReadM INDEL 0041.scaffold00154 555999 2 .. GA - ReadM SNP 0041.scaffold00154 556257 1 G A - ReadM SNP 0041.scaffold00154 556289 1 A T - ScafM SNP 0041.scaffold00154 556370 2 GA AG scaffold2344 ScafM SNP 0041.scaffold00154 556425 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 556478 1 T C scaffold2344 ScafM SNP 0041.scaffold00154 556493 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 556540 1 C A scaffold2344 ScafM SNP 0041.scaffold00154 556698 1 A G scaffold2344 ScafM INDEL 0041.scaffold00154 556844 13 ............. CTACCCCGAGGCT scaffold2344 ScafM SNP 0041.scaffold00154 556927 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 556931 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 556985 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 557017 1 G A scaffold2344 ScafM INDEL 0041.scaffold00154 557024 1 C . scaffold2344 ScafM SNP 0041.scaffold00154 557048 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 557064 1 C G scaffold2344 ScafM SNP 0041.scaffold00154 557077 1 G C scaffold2344 ScafM SNP 0041.scaffold00154 557097 1 T C scaffold2344 ScafM SNP 0041.scaffold00154 557111 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 557157 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 557191 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 557193 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 557212 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 557214 1 G T scaffold2344 ScafM SNP 0041.scaffold00154 557234 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 557783 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 557845 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 557909 1 C A scaffold2344 ScafM SNP 0041.scaffold00154 557926 1 T A scaffold2344 ScafM SNP 0041.scaffold00154 558002 1 T A scaffold2344 ScafM SNP 0041.scaffold00154 558007 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 558060 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 561089 1 C T scaffold4567 ScafM INDEL 0041.scaffold00154 561103 4 .... AAAT scaffold4567 ScafM SNP 0041.scaffold00154 561104 1 G T scaffold4567 ScafM SNP 0041.scaffold00154 561127 1 A T scaffold4567 ScafM SNP 0041.scaffold00154 561141 1 T C scaffold4567 ScafM SNP 0041.scaffold00154 562553 1 A G scaffold61869 ScafM INDEL 0041.scaffold00154 562556 3 TCC ... scaffold61869 ScafM SNP 0041.scaffold00154 562565 1 T G scaffold61869 ScafM SNP 0041.scaffold00154 562640 1 T C scaffold61869 ScafM INDEL 0041.scaffold00154 562658 8 ........ GATATTAA scaffold61869 ScafM SNP 0041.scaffold00154 562672 1 T C scaffold61869 ScafM INDEL 0041.scaffold00154 562985 7 ....... TCTGGTA scaffold61869 ScafM SNP 0041.scaffold00154 563295 1 T C scaffold61869 ScafM SNP 0041.scaffold00154 563877 3 CCA TAG scaffold61869 ScafM SNP 0041.scaffold00154 563901 1 G A scaffold61869 ScafM SNP 0041.scaffold00154 563994 1 C T scaffold61869 ScafM SNP 0041.scaffold00154 564658 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 565153 1 A T scaffold2344 ScafM SNP 0041.scaffold00154 565158 1 G C scaffold2344 ScafM SNP 0041.scaffold00154 565194 1 C A scaffold2344 ScafM INDEL 0041.scaffold00154 565208 5 ..... GAACA scaffold2344 ScafM SNP 0041.scaffold00154 565234 1 A T scaffold2344 ScafM INDEL 0041.scaffold00154 565244 7 CTGCTGC ....... scaffold2344 ScafM SNP 0041.scaffold00154 565266 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 565335 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 565368 1 C G scaffold2344 ScafM SNP 0041.scaffold00154 565374 2 TT AA scaffold2344 ScafM SNP 0041.scaffold00154 565416 1 A C scaffold2344 ScafM INDEL 0041.scaffold00154 565455 3 TTA ... scaffold2344 ScafM SNP 0041.scaffold00154 565509 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 565524 1 C A scaffold2344 ScafM SNP 0041.scaffold00154 565532 1 T A scaffold2344 ScafM SNP 0041.scaffold00154 565537 2 AT CC scaffold2344 ScafM SNP 0041.scaffold00154 565545 1 A T scaffold2344 ScafM SNP 0041.scaffold00154 565562 1 A G scaffold2344 ScafM INDEL 0041.scaffold00154 565576 2 .. AA scaffold2344 ScafM SNP 0041.scaffold00154 565578 1 T A scaffold2344 ScafM SNP 0041.scaffold00154 565674 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 565703 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 565720 1 A C scaffold2344 ScafM SNP 0041.scaffold00154 565747 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 565764 1 T C scaffold2344 ScafM SNP 0041.scaffold00154 565766 1 T C scaffold2344 ScafM SNP 0041.scaffold00154 565771 1 G T scaffold2344 ScafM SNP 0041.scaffold00154 565798 2 GA AT scaffold2344 ScafM SNP 0041.scaffold00154 565827 1 G A scaffold2344 ScafM INDEL 0041.scaffold00154 565829 1 . C scaffold2344 ScafM SNP 0041.scaffold00154 565834 1 A C scaffold2344 ScafM SNP 0041.scaffold00154 565840 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 565854 1 G C scaffold2344 ScafM SNP 0041.scaffold00154 565898 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 565979 1 T C scaffold2344 ScafM SNP 0041.scaffold00154 565991 1 C A scaffold2344 ScafM SNP 0041.scaffold00154 566001 1 T C scaffold2344 ScafM INDEL 0041.scaffold00154 567360 2 .. AA scaffold5279 ScafM INDEL 0041.scaffold00154 567928 13 ............. TTATTTTCATTTT scaffold5279 ScafM INDEL 0041.scaffold00154 567961 1 . T scaffold5279 ScafM SNP 0041.scaffold00154 568298 1 T C scaffold5279 ScafM INDEL 0041.scaffold00154 568326 1 A . scaffold5279 ScafM SNP 0041.scaffold00154 573730 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 573733 1 G A scaffold2344 ScafM SNP 0041.scaffold00154 573751 1 C T scaffold2344 ScafM SNP 0041.scaffold00154 573785 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 573799 1 A C scaffold2344 ScafM SNP 0041.scaffold00154 573806 1 G T scaffold2344 ScafM SNP 0041.scaffold00154 573845 2 GA AG scaffold2344 ScafM SNP 0041.scaffold00154 573873 1 A G scaffold2344 ScafM SNP 0041.scaffold00154 578624 1 G C scaffold3222 ScafM SNP 0041.scaffold00154 578637 1 C G scaffold3222 ScafM SNP 0041.scaffold00154 578687 1 C T scaffold3222 ScafM INDEL 0041.scaffold00154 578693 1 A . scaffold3222 ScafM INDEL 0041.scaffold00154 578695 1 T . scaffold3222 ScafM SNP 0041.scaffold00154 578712 1 T C scaffold3222 ScafM SNP 0041.scaffold00154 578715 1 C T scaffold3222 ScafM SNP 0041.scaffold00154 578743 1 C A scaffold3222 ScafM SNP 0041.scaffold00154 578747 1 T C scaffold3222 ReadM SNP 0041.scaffold00154 583143 1 G A - ReadM SNP 0041.scaffold00154 587256 1 T G - ReadM SNP 0041.scaffold00154 587371 1 C T - ReadM SNP 0041.scaffold00154 587438 1 C G - ReadM SNP 0041.scaffold00154 590651 1 G C - ReadM SNP 0041.scaffold00154 590941 1 T G - ReadM SNP 0041.scaffold00154 591019 1 G A - ReadM SNP 0041.scaffold00154 591056 1 T C - ReadM INDEL 0041.scaffold00154 591072 1 C . - ReadM SNP 0041.scaffold00154 591115 1 A T - ReadM SNP 0041.scaffold00154 591194 1 T G - ScafM SNP 0041.scaffold00154 591743 1 A G scaffold24746 ScafM INDEL 0041.scaffold00154 591770 1 T . scaffold24746 ScafM SNP 0041.scaffold00154 591775 2 TC AG scaffold24746 ScafM INDEL 0041.scaffold00154 591788 1 . A scaffold24746 Both SNP 0041.scaffold00154 591805 1 A G scaffold24746 Both SNP 0041.scaffold00154 591813 1 T C scaffold24746 ScafM SNP 0041.scaffold00154 592122 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 592131 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 592144 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 592198 2 TA CC scaffold2335 ScafM INDEL 0041.scaffold00154 592206 1 . T scaffold2335 ScafM SNP 0041.scaffold00154 592226 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 592234 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 595056 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 595058 1 T C scaffold2335 ScafM INDEL 0041.scaffold00154 595066 1 C . scaffold2335 ScafM SNP 0041.scaffold00154 595079 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 595082 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 595110 1 A G scaffold2335 ScafM INDEL 0041.scaffold00154 595186 1 T . scaffold2335 ScafM INDEL 0041.scaffold00154 595211 2 AA .G scaffold2335 ScafM SNP 0041.scaffold00154 595391 1 A T scaffold24746 ScafM INDEL 0041.scaffold00154 596881 1 . T scaffold2335 ScafM SNP 0041.scaffold00154 596911 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 596934 2 TG CA scaffold2335 ScafM SNP 0041.scaffold00154 596950 1 A G scaffold2335 ScafM INDEL 0041.scaffold00154 596960 3 ... GAA scaffold2335 ScafM INDEL 0041.scaffold00154 596966 1 . G scaffold2335 ScafM SNP 0041.scaffold00154 596970 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 596972 1 G T scaffold2335 ScafM SNP 0041.scaffold00154 596977 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 596980 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 596986 1 G T scaffold2335 ScafM INDEL 0041.scaffold00154 597035 1 T . scaffold2335 ScafM SNP 0041.scaffold00154 597037 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 597044 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597049 1 G A scaffold2335 ScafM INDEL 0041.scaffold00154 597074 8 CGGTGACA ........ scaffold2335 ScafM SNP 0041.scaffold00154 597087 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597092 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 597099 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597157 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597164 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597185 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597201 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597231 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 597243 1 C A scaffold2335 ScafM SNP 0041.scaffold00154 597248 1 A C scaffold2335 ScafM SNP 0041.scaffold00154 597250 1 G C scaffold2335 ScafM SNP 0041.scaffold00154 597254 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597546 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597584 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597595 1 C A scaffold2335 ScafM SNP 0041.scaffold00154 597627 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 597683 1 T C scaffold2335 ScafM INDEL 0041.scaffold00154 597694 10 CCTATTCTTC .......... scaffold2335 ScafM INDEL 0041.scaffold00154 597706 8 CTCCATTA ........ scaffold2335 ScafM INDEL 0041.scaffold00154 597715 5 GCCCC ..... scaffold2335 ScafM SNP 0041.scaffold00154 597737 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 597743 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 597761 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 597791 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 597834 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 597840 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 597854 2 AC GA scaffold2335 ScafM SNP 0041.scaffold00154 597905 1 C A scaffold2335 ScafM SNP 0041.scaffold00154 597907 2 AG TT scaffold2335 ScafM SNP 0041.scaffold00154 597938 1 G C scaffold2335 ScafM SNP 0041.scaffold00154 597965 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 597982 1 G C scaffold2335 ScafM SNP 0041.scaffold00154 597990 1 G T scaffold2335 ScafM SNP 0041.scaffold00154 598010 1 A C scaffold2335 ScafM INDEL 0041.scaffold00154 598025 4 .... TACG scaffold2335 ScafM SNP 0041.scaffold00154 598032 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 598041 1 A C scaffold2335 ScafM INDEL 0041.scaffold00154 598310 7 ....... GAAAATT scaffold24746 ReadM SNP 0041.scaffold00154 600878 1 C G - ScafM SNP 0041.scaffold00154 601645 1 A C scaffold2335 ScafM SNP 0041.scaffold00154 601697 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 601717 1 C G scaffold2335 ScafM SNP 0041.scaffold00154 602221 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 602245 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 602255 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 602280 1 T C scaffold2335 ScafM INDEL 0041.scaffold00154 608187 1 . A scaffold2335 ScafM SNP 0041.scaffold00154 608282 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 608303 1 G A scaffold2335 ScafM INDEL 0041.scaffold00154 608305 1 . C scaffold2335 ScafM SNP 0041.scaffold00154 608309 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 608340 1 T G scaffold2335 ScafM INDEL 0041.scaffold00154 608344 1 G . scaffold2335 ScafM INDEL 0041.scaffold00154 608347 2 AA .. scaffold2335 ScafM SNP 0041.scaffold00154 608359 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 608362 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 608381 1 G A scaffold2335 ScafM INDEL 0041.scaffold00154 608429 6 ...... TGGCAA scaffold2335 ScafM SNP 0041.scaffold00154 608436 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608449 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608463 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608627 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 608632 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 608637 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 608640 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608730 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 608742 1 C G scaffold2335 ScafM SNP 0041.scaffold00154 608766 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608795 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 608828 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 608841 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 608869 1 G T scaffold2335 ScafM SNP 0041.scaffold00154 608888 1 C A scaffold2335 ScafM SNP 0041.scaffold00154 608915 1 C G scaffold2335 ScafM SNP 0041.scaffold00154 608922 1 T G scaffold2335 ScafM SNP 0041.scaffold00154 608925 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 608951 1 A C scaffold2335 ScafM SNP 0041.scaffold00154 609000 1 G T scaffold2335 ScafM SNP 0041.scaffold00154 635000 2 CT GA scaffold2335 ScafM SNP 0041.scaffold00154 635043 1 A T scaffold2335 ScafM SNP 0041.scaffold00154 635085 1 G T scaffold2335 ScafM SNP 0041.scaffold00154 635138 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 635141 1 C G scaffold2335 ScafM SNP 0041.scaffold00154 635154 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 635157 1 G C scaffold2335 ScafM SNP 0041.scaffold00154 635201 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 635259 2 GG AA scaffold2335 ScafM INDEL 0041.scaffold00154 635282 4 .... TACA scaffold2335 ScafM INDEL 0041.scaffold00154 635284 6 ...... TTTTTT scaffold2335 ScafM SNP 0041.scaffold00154 635299 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 635470 1 G T scaffold2335 ScafM INDEL 0041.scaffold00154 635482 3 ATA ... scaffold2335 ScafM SNP 0041.scaffold00154 635506 1 A G scaffold2335 ScafM SNP 0041.scaffold00154 635526 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 635576 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 635612 1 C T scaffold2335 ScafM INDEL 0041.scaffold00154 635807 18 .................. AGTTTTATTGTACATCTA scaffold2335 ScafM SNP 0041.scaffold00154 635846 1 T A scaffold2335 ScafM SNP 0041.scaffold00154 635892 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 636257 1 A C scaffold21991 ScafM SNP 0041.scaffold00154 636446 1 C T scaffold21991 ScafM INDEL 0041.scaffold00154 637293 5 AATTT ....G scaffold2335 ScafM SNP 0041.scaffold00154 637335 1 C T scaffold2335 ScafM SNP 0041.scaffold00154 637402 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 637543 1 G A scaffold2335 ScafM SNP 0041.scaffold00154 637547 1 G C scaffold2335 ScafM SNP 0041.scaffold00154 637579 1 T C scaffold2335 ScafM SNP 0041.scaffold00154 637626 1 A T scaffold2335 ReadM SNP 0041.scaffold00154 638300 1 G A - ReadM SNP 0041.scaffold00154 638302 1 C T - ReadM INDEL 0041.scaffold00154 638397 1 A . - ReadM SNP 0041.scaffold00154 638409 1 A G - ReadM SNP 0041.scaffold00154 638914 1 A C - ScafM SNP 0041.scaffold00154 639082 1 G A scaffold60275 ReadM SNP 0041.scaffold00154 639182 1 G T - ReadM SNP 0041.scaffold00154 639390 1 T C - ReadM SNP 0041.scaffold00154 639663 1 A G - ScafM SNP 0041.scaffold00154 639718 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 639765 1 G A scaffold2377 ScafM SNP 0041.scaffold00154 639788 1 A T scaffold2377 ScafM INDEL 0041.scaffold00154 639790 2 .. CC scaffold2377 ScafM SNP 0041.scaffold00154 639880 1 T G scaffold2377 ScafM SNP 0041.scaffold00154 639912 1 C A scaffold2377 ScafM INDEL 0041.scaffold00154 639967 1 A . scaffold2377 ScafM SNP 0041.scaffold00154 639974 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 640004 1 A C scaffold2377 ScafM SNP 0041.scaffold00154 640112 1 A G scaffold2377 ReadM SNP 0041.scaffold00154 640800 1 G A - ReadM SNP 0041.scaffold00154 640842 1 T C - ReadM SNP 0041.scaffold00154 640898 1 T G - ReadM SNP 0041.scaffold00154 641048 1 G A - ReadM SNP 0041.scaffold00154 641122 1 A T - ReadM SNP 0041.scaffold00154 641127 1 C T - ReadM SNP 0041.scaffold00154 641242 1 G T - ReadM SNP 0041.scaffold00154 641330 1 A G - ReadM SNP 0041.scaffold00154 641345 1 C A - ReadM SNP 0041.scaffold00154 641441 1 C T - ReadM SNP 0041.scaffold00154 641492 1 T C - ReadM SNP 0041.scaffold00154 641540 1 T C - ReadM SNP 0041.scaffold00154 641544 1 A G - ReadM SNP 0041.scaffold00154 641569 1 T G - ReadM SNP 0041.scaffold00154 641673 1 T G - ReadM SNP 0041.scaffold00154 641914 1 T C - ReadM SNP 0041.scaffold00154 642001 1 T C - ReadM SNP 0041.scaffold00154 644519 1 T C - ReadM SNP 0041.scaffold00154 644532 1 G A - ReadM SNP 0041.scaffold00154 644750 1 A G - ScafM INDEL 0041.scaffold00154 645536 1 C . scaffold2377 ScafM INDEL 0041.scaffold00154 647343 7 ....... ATTCACG scaffold2377 ScafM SNP 0041.scaffold00154 647399 2 AC GA scaffold2377 Both SNP 0041.scaffold00154 647440 1 T C scaffold2377 Both SNP 0041.scaffold00154 647570 1 A C scaffold2377 Both SNP 0041.scaffold00154 647578 1 C T scaffold2377 ScafM INDEL 0041.scaffold00154 647666 1 . A scaffold2377 ScafM SNP 0041.scaffold00154 647721 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 647728 1 G T scaffold2377 ScafM SNP 0041.scaffold00154 647891 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 647948 1 A T scaffold2377 ScafM INDEL 0041.scaffold00154 648159 2 TG .. scaffold2377 ScafM SNP 0041.scaffold00154 648162 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 648236 2 TA GC scaffold2377 ScafM SNP 0041.scaffold00154 648303 1 A T scaffold2377 ReadM INDEL 0041.scaffold00154 648901 1 . G - ScafM SNP 0041.scaffold00154 649388 1 G T scaffold60003 ScafM SNP 0041.scaffold00154 649577 1 C T scaffold60003 ScafM SNP 0041.scaffold00154 649592 1 T A scaffold60003 ScafM SNP 0041.scaffold00154 649598 1 T A scaffold60003 ScafM SNP 0041.scaffold00154 649608 1 T C scaffold60003 ScafM SNP 0041.scaffold00154 649619 1 T A scaffold60003 ScafM SNP 0041.scaffold00154 649667 1 C T scaffold60003 ScafM SNP 0041.scaffold00154 649692 1 T A scaffold60003 ScafM SNP 0041.scaffold00154 649698 1 A T scaffold60003 ScafM SNP 0041.scaffold00154 649705 1 C G scaffold60003 ScafM SNP 0041.scaffold00154 649746 1 C A scaffold60003 ScafM SNP 0041.scaffold00154 649775 1 G A scaffold60003 ScafM SNP 0041.scaffold00154 650107 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 650121 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 650143 1 T A scaffold2377 ScafM INDEL 0041.scaffold00154 650152 2 TT .C scaffold2377 ScafM SNP 0041.scaffold00154 650164 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 650173 1 T G scaffold2377 ScafM SNP 0041.scaffold00154 650225 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 650253 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 650259 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 650413 2 AT CG scaffold2377 ScafM SNP 0041.scaffold00154 650484 1 G C scaffold2377 ScafM INDEL 0041.scaffold00154 650491 1 G . scaffold2377 ScafM SNP 0041.scaffold00154 650535 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 650541 1 A T scaffold2377 ScafM SNP 0041.scaffold00154 650544 1 T A scaffold2377 ScafM INDEL 0041.scaffold00154 650606 3 GTA ... scaffold2377 Both SNP 0041.scaffold00154 653711 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 662745 1 G T scaffold2377 ReadM INDEL 0041.scaffold00154 662756 1 . T - Both SNP 0041.scaffold00154 665206 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 665237 1 T C scaffold2377 ScafM INDEL 0041.scaffold00154 668314 5 CTAAC ..... scaffold2377 ScafM INDEL 0041.scaffold00154 668323 1 A . scaffold2377 ScafM INDEL 0041.scaffold00154 668325 4 ATCT .... scaffold2377 ScafM INDEL 0041.scaffold00154 668331 1 T . scaffold2377 ScafM INDEL 0041.scaffold00154 668334 2 AA .. scaffold2377 ScafM INDEL 0041.scaffold00154 668337 8 GGTTGAAA ........ scaffold2377 ScafM SNP 0041.scaffold00154 668355 1 C T scaffold2377 Both SNP 0041.scaffold00154 668435 1 C T scaffold2377 ScafM INDEL 0041.scaffold00154 668578 1 . T scaffold2377 Both SNP 0041.scaffold00154 668856 1 C T scaffold2377 ReadM SNP 0041.scaffold00154 669116 1 G A - ReadM SNP 0041.scaffold00154 669168 1 T C - ReadM SNP 0041.scaffold00154 669173 1 C T - ReadM SNP 0041.scaffold00154 669308 1 C A - ReadM SNP 0041.scaffold00154 669372 1 A C - ReadM SNP 0041.scaffold00154 669382 1 A G - ReadM SNP 0041.scaffold00154 669443 1 G C - ReadM INDEL 0041.scaffold00154 669523 1 C . - ReadM SNP 0041.scaffold00154 669915 1 A T - ReadM INDEL 0041.scaffold00154 669916 2 .. TT - ReadM SNP 0041.scaffold00154 670022 1 A G - ReadM SNP 0041.scaffold00154 670181 1 C G - ReadM SNP 0041.scaffold00154 670203 1 T C - ReadM SNP 0041.scaffold00154 670332 1 C T - ReadM SNP 0041.scaffold00154 670355 1 G A - ReadM SNP 0041.scaffold00154 670490 1 G A - ReadM INDEL 0041.scaffold00154 670584 1 . T - ReadM SNP 0041.scaffold00154 670797 1 C T - ReadM INDEL 0041.scaffold00154 671247 2 .. AT - ReadM SNP 0041.scaffold00154 671443 1 T C - ReadM SNP 0041.scaffold00154 671581 1 G A - ReadM SNP 0041.scaffold00154 672050 1 C T - ReadM SNP 0041.scaffold00154 672144 1 A G - ReadM SNP 0041.scaffold00154 672152 1 T C - ReadM SNP 0041.scaffold00154 672210 1 G A - ReadM INDEL 0041.scaffold00154 672309 1 A . - ReadM SNP 0041.scaffold00154 672568 1 T C - ReadM SNP 0041.scaffold00154 672706 1 C T - ReadM INDEL 0041.scaffold00154 672871 1 A . - ReadM SNP 0041.scaffold00154 672982 1 C T - ReadM SNP 0041.scaffold00154 673243 1 G A - ReadM SNP 0041.scaffold00154 673392 1 G A - ReadM SNP 0041.scaffold00154 673474 1 A G - ReadM SNP 0041.scaffold00154 673586 1 T C - ReadM SNP 0041.scaffold00154 674053 1 G A - ReadM SNP 0041.scaffold00154 674193 1 G A - ReadM SNP 0041.scaffold00154 674361 1 G A - ReadM INDEL 0041.scaffold00154 674461 1 A . - ReadM SNP 0041.scaffold00154 674599 1 T G - ReadM SNP 0041.scaffold00154 674775 1 T G - ReadM SNP 0041.scaffold00154 674893 1 A G - ReadM SNP 0041.scaffold00154 674984 1 A G - ReadM SNP 0041.scaffold00154 675451 1 T C - ReadM SNP 0041.scaffold00154 675505 1 C T - ReadM SNP 0041.scaffold00154 675585 1 C T - ReadM SNP 0041.scaffold00154 675616 1 C T - ReadM SNP 0041.scaffold00154 675851 1 G A - ReadM SNP 0041.scaffold00154 676568 1 G A - ScafM SNP 0041.scaffold00154 677016 2 TG GC scaffold2377 ReadM SNP 0041.scaffold00154 677180 1 C T - ReadM SNP 0041.scaffold00154 677196 1 C T - ReadM SNP 0041.scaffold00154 677353 1 T C - ReadM SNP 0041.scaffold00154 677378 1 G A - ScafM SNP 0041.scaffold00154 677597 2 TT AA scaffold2377 ScafM INDEL 0041.scaffold00154 677934 6 GAGAGA ...... scaffold2377 Both SNP 0041.scaffold00154 677990 1 G A scaffold2377 Both SNP 0041.scaffold00154 678042 1 C A scaffold2377 Both SNP 0041.scaffold00154 678341 1 C A scaffold2377 ReadM SNP 0041.scaffold00154 678562 1 C T - ReadM SNP 0041.scaffold00154 678575 1 C T - ReadM SNP 0041.scaffold00154 679052 1 T C - Both SNP 0041.scaffold00154 679426 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 679481 1 C A scaffold2377 ReadM SNP 0041.scaffold00154 679729 1 G A - ReadM INDEL 0041.scaffold00154 679846 1 C . - ReadM SNP 0041.scaffold00154 679953 1 G A - ReadM SNP 0041.scaffold00154 680189 1 G A - ReadM SNP 0041.scaffold00154 680290 1 C T - ReadM SNP 0041.scaffold00154 680389 1 G T - ReadM SNP 0041.scaffold00154 680637 1 A G - ReadM SNP 0041.scaffold00154 680735 1 T C - ReadM SNP 0041.scaffold00154 680821 1 T C - ReadM SNP 0041.scaffold00154 680976 1 C T - ReadM SNP 0041.scaffold00154 681235 1 A G - ReadM SNP 0041.scaffold00154 681293 1 A T - ReadM SNP 0041.scaffold00154 681530 1 T G - ReadM SNP 0041.scaffold00154 681650 1 A G - ReadM SNP 0041.scaffold00154 682131 1 A G - ReadM SNP 0041.scaffold00154 682138 1 G T - ReadM SNP 0041.scaffold00154 682538 1 A C - ReadM SNP 0041.scaffold00154 682628 1 G A - ReadM SNP 0041.scaffold00154 682736 1 G T - ReadM SNP 0041.scaffold00154 682780 1 A G - ReadM INDEL 0041.scaffold00154 682859 1 . G - ReadM SNP 0041.scaffold00154 683125 1 G T - ReadM SNP 0041.scaffold00154 683315 1 C T - ReadM SNP 0041.scaffold00154 683381 1 G A - ReadM SNP 0041.scaffold00154 683586 1 G A - ReadM SNP 0041.scaffold00154 683745 1 C T - ReadM SNP 0041.scaffold00154 683837 1 G A - ReadM SNP 0041.scaffold00154 683934 1 T C - ReadM SNP 0041.scaffold00154 684033 1 T C - ReadM INDEL 0041.scaffold00154 684058 1 G . - ReadM SNP 0041.scaffold00154 684193 1 T C - Both SNP 0041.scaffold00154 684289 1 G T scaffold2377 ScafM INDEL 0041.scaffold00154 684394 2 TT .. scaffold2377 ReadM SNP 0041.scaffold00154 684515 1 A T - Both SNP 0041.scaffold00154 684831 1 C T scaffold2377 Both SNP 0041.scaffold00154 684954 1 G T scaffold2377 Both SNP 0041.scaffold00154 685044 1 T A scaffold2377 Both SNP 0041.scaffold00154 685226 1 G A scaffold2377 Both SNP 0041.scaffold00154 685321 1 G A scaffold2377 Both SNP 0041.scaffold00154 685643 1 G T scaffold2377 Both SNP 0041.scaffold00154 685900 1 C G scaffold2377 Both SNP 0041.scaffold00154 685954 1 A C scaffold2377 Both SNP 0041.scaffold00154 686078 1 G A scaffold2377 Both SNP 0041.scaffold00154 686352 1 T A scaffold2377 Both SNP 0041.scaffold00154 686760 1 G A scaffold2377 ReadM SNP 0041.scaffold00154 686894 1 T C - ReadM SNP 0041.scaffold00154 686973 1 C T - ReadM SNP 0041.scaffold00154 687014 1 C T - Both SNP 0041.scaffold00154 687353 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 687386 1 T C scaffold2377 Both SNP 0041.scaffold00154 687503 1 A C scaffold2377 Both SNP 0041.scaffold00154 687742 1 T G scaffold2377 Both SNP 0041.scaffold00154 688211 1 T C scaffold2377 Both SNP 0041.scaffold00154 688247 1 A G scaffold2377 Both SNP 0041.scaffold00154 688351 1 G A scaffold2377 Both SNP 0041.scaffold00154 688373 1 C A scaffold2377 Both INDEL 0041.scaffold00154 688451 1 C . scaffold2377 Both INDEL 0041.scaffold00154 688717 1 C . scaffold2377 ScafM SNP 0041.scaffold00154 688727 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 688738 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 688747 1 A T scaffold2377 Both SNP 0041.scaffold00154 688778 1 G A scaffold2377 Both SNP 0041.scaffold00154 688932 1 T C scaffold2377 Both SNP 0041.scaffold00154 688946 1 C A scaffold2377 Both INDEL 0041.scaffold00154 689093 1 . G scaffold2377 ScafM SNP 0041.scaffold00154 689095 2 AC TT scaffold2377 ReadM SNP 0041.scaffold00154 689185 1 G A - ReadM SNP 0041.scaffold00154 689629 1 C G - ReadM SNP 0041.scaffold00154 689687 1 A C - ReadM SNP 0041.scaffold00154 689755 1 T C - ReadM SNP 0041.scaffold00154 689785 1 C T - ReadM SNP 0041.scaffold00154 689800 1 G A - ScafM SNP 0041.scaffold00154 690117 1 G A scaffold2377 ReadM SNP 0041.scaffold00154 690892 1 C T - ReadM SNP 0041.scaffold00154 690920 1 G C - ReadM SNP 0041.scaffold00154 691153 1 T C - ReadM SNP 0041.scaffold00154 691166 1 A T - ReadM SNP 0041.scaffold00154 691194 1 T A - ReadM SNP 0041.scaffold00154 691495 1 A T - ReadM SNP 0041.scaffold00154 691535 1 G T - ReadM SNP 0041.scaffold00154 691579 1 A G - ReadM SNP 0041.scaffold00154 691612 1 G A - ReadM SNP 0041.scaffold00154 691693 1 G A - ReadM SNP 0041.scaffold00154 691845 1 C T - ReadM SNP 0041.scaffold00154 691884 1 A G - ReadM SNP 0041.scaffold00154 692027 1 A G - ReadM INDEL 0041.scaffold00154 692128 1 G . - ReadM SNP 0041.scaffold00154 692345 1 G A - ReadM SNP 0041.scaffold00154 692511 1 T C - ReadM SNP 0041.scaffold00154 692604 1 T C - ReadM SNP 0041.scaffold00154 692663 1 A G - ReadM SNP 0041.scaffold00154 692714 1 T C - ReadM SNP 0041.scaffold00154 692817 1 T C - ReadM SNP 0041.scaffold00154 692864 1 A C - ReadM SNP 0041.scaffold00154 693093 1 G A - ReadM SNP 0041.scaffold00154 693197 1 A G - ReadM SNP 0041.scaffold00154 693410 1 A C - ReadM SNP 0041.scaffold00154 693431 1 G C - ReadM SNP 0041.scaffold00154 693583 1 C T - ReadM INDEL 0041.scaffold00154 693755 1 . T - ReadM SNP 0041.scaffold00154 693903 1 A G - ReadM SNP 0041.scaffold00154 693967 1 T A - ReadM SNP 0041.scaffold00154 694235 1 C T - ReadM SNP 0041.scaffold00154 694269 1 T C - ReadM SNP 0041.scaffold00154 694298 1 C T - Both SNP 0041.scaffold00154 694595 1 T C scaffold2377 Both SNP 0041.scaffold00154 694655 1 G A scaffold2377 Both SNP 0041.scaffold00154 694776 1 G C scaffold2377 Both SNP 0041.scaffold00154 694934 1 G T scaffold2377 ReadM SNP 0041.scaffold00154 694966 1 G T - ReadM SNP 0041.scaffold00154 695005 1 A G - ReadM SNP 0041.scaffold00154 695048 1 G A - ReadM INDEL 0041.scaffold00154 695531 1 A . - ReadM SNP 0041.scaffold00154 695584 1 G A - Both SNP 0041.scaffold00154 695761 1 C T scaffold2377 Both SNP 0041.scaffold00154 695765 1 C T scaffold2377 ReadM SNP 0041.scaffold00154 695916 1 T A - ReadM SNP 0041.scaffold00154 696096 1 T C - ReadM INDEL 0041.scaffold00154 696219 1 . G - ReadM SNP 0041.scaffold00154 696279 1 T A - ReadM SNP 0041.scaffold00154 696382 1 T C - ReadM SNP 0041.scaffold00154 696419 1 T C - Both SNP 0041.scaffold00154 696843 1 A C scaffold2377 ReadM INDEL 0041.scaffold00154 696870 1 G . - ScafM INDEL 0041.scaffold00154 696870 2 GT .A scaffold2377 ReadM SNP 0041.scaffold00154 696983 1 C T - ReadM SNP 0041.scaffold00154 696995 1 C T - ReadM SNP 0041.scaffold00154 697086 1 T C - ReadM SNP 0041.scaffold00154 697159 1 T A - Both SNP 0041.scaffold00154 697241 1 G A scaffold2377 Both SNP 0041.scaffold00154 697416 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 697632 1 C T scaffold2377 Both SNP 0041.scaffold00154 697638 1 A T scaffold2377 Both SNP 0041.scaffold00154 697661 1 T G scaffold2377 Both SNP 0041.scaffold00154 697678 1 C A scaffold2377 Both SNP 0041.scaffold00154 697717 1 A T scaffold2377 ScafM SNP 0041.scaffold00154 697750 1 T C scaffold2377 ReadM SNP 0041.scaffold00154 697865 1 A T - ReadM INDEL 0041.scaffold00154 697907 2 .. TC - Both SNP 0041.scaffold00154 697978 1 A G scaffold2377 Both INDEL 0041.scaffold00154 697994 1 A . scaffold2377 Both SNP 0041.scaffold00154 698007 1 G A scaffold2377 Both SNP 0041.scaffold00154 698167 1 C T scaffold2377 Both SNP 0041.scaffold00154 698194 1 A G scaffold2377 Both SNP 0041.scaffold00154 698306 1 T G scaffold2377 Both SNP 0041.scaffold00154 698395 1 T A scaffold2377 Both SNP 0041.scaffold00154 698448 1 C G scaffold2377 Both SNP 0041.scaffold00154 698466 1 C T scaffold2377 Both SNP 0041.scaffold00154 698542 1 G A scaffold2377 Both SNP 0041.scaffold00154 698548 1 A T scaffold2377 Both SNP 0041.scaffold00154 698551 1 A G scaffold2377 Both SNP 0041.scaffold00154 698611 1 G A scaffold2377 Both SNP 0041.scaffold00154 698830 1 T C scaffold2377 Both SNP 0041.scaffold00154 698890 1 A G scaffold2377 Both SNP 0041.scaffold00154 698932 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 699006 2 AG GT scaffold2377 Both SNP 0041.scaffold00154 699061 1 T A scaffold2377 Both SNP 0041.scaffold00154 699205 1 A G scaffold2377 Both SNP 0041.scaffold00154 699271 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 699281 1 A G scaffold2377 Both SNP 0041.scaffold00154 699336 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 699379 1 C G scaffold2377 Both SNP 0041.scaffold00154 699445 1 T C scaffold2377 Both SNP 0041.scaffold00154 699702 1 T C scaffold2377 Both SNP 0041.scaffold00154 699709 1 C G scaffold2377 Both SNP 0041.scaffold00154 699730 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 699781 1 G C scaffold2377 Both SNP 0041.scaffold00154 699790 1 G C scaffold2377 Both SNP 0041.scaffold00154 699811 1 G C scaffold2377 Both SNP 0041.scaffold00154 699819 1 C T scaffold2377 Both SNP 0041.scaffold00154 699983 1 C G scaffold2377 Both SNP 0041.scaffold00154 700228 1 G A scaffold2377 Both SNP 0041.scaffold00154 700300 1 A G scaffold2377 Both SNP 0041.scaffold00154 700342 1 T G scaffold2377 Both SNP 0041.scaffold00154 700369 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 700448 1 A C scaffold2377 ScafM INDEL 0041.scaffold00154 700450 1 G . scaffold2377 ScafM INDEL 0041.scaffold00154 700453 4 TATT .... scaffold2377 ScafM INDEL 0041.scaffold00154 700459 3 CTG ... scaffold2377 ScafM INDEL 0041.scaffold00154 700466 1 C . scaffold2377 ScafM INDEL 0041.scaffold00154 700469 1 T . scaffold2377 ScafM SNP 0041.scaffold00154 700472 3 TTA GGC scaffold2377 ScafM INDEL 0041.scaffold00154 700476 6 TTAGAA .....C scaffold2377 ScafM INDEL 0041.scaffold00154 700487 2 GA .. scaffold2377 ScafM INDEL 0041.scaffold00154 700491 3 ACC ... scaffold2377 ScafM INDEL 0041.scaffold00154 700495 3 GAG .TT scaffold2377 ScafM SNP 0041.scaffold00154 700506 1 A C scaffold2377 ScafM INDEL 0041.scaffold00154 700507 2 .A GC scaffold2377 ScafM SNP 0041.scaffold00154 700510 1 T A scaffold2377 ScafM INDEL 0041.scaffold00154 700514 3 GTG ..A scaffold2377 ScafM SNP 0041.scaffold00154 700518 1 C A scaffold2377 ScafM INDEL 0041.scaffold00154 700520 2 CA .T scaffold2377 ScafM INDEL 0041.scaffold00154 700524 2 TT .A scaffold2377 ScafM SNP 0041.scaffold00154 700527 2 GT AC scaffold2377 ScafM SNP 0041.scaffold00154 700530 3 TTT ACA scaffold2377 ScafM SNP 0041.scaffold00154 700534 1 A C scaffold2377 ScafM SNP 0041.scaffold00154 700538 1 A C scaffold2377 ScafM INDEL 0041.scaffold00154 700541 3 GCA ... scaffold2377 ScafM INDEL 0041.scaffold00154 700546 1 C . scaffold2377 ScafM INDEL 0041.scaffold00154 700548 1 C . scaffold2377 ScafM SNP 0041.scaffold00154 700550 1 A G scaffold2377 ScafM INDEL 0041.scaffold00154 700553 2 AA .. scaffold2377 ScafM SNP 0041.scaffold00154 700566 1 G A scaffold2377 ScafM SNP 0041.scaffold00154 700604 1 C T scaffold2377 ScafM INDEL 0041.scaffold00154 700612 10 TGCCAATATA .......... scaffold2377 ScafM SNP 0041.scaffold00154 700634 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 700651 1 C A scaffold2377 ScafM SNP 0041.scaffold00154 700672 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 700693 1 A C scaffold2377 ScafM SNP 0041.scaffold00154 700715 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 700726 1 A G scaffold2377 Both SNP 0041.scaffold00154 700788 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 700805 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 700808 1 C A scaffold2377 Both SNP 0041.scaffold00154 700839 1 A C scaffold2377 Both SNP 0041.scaffold00154 700868 1 A G scaffold2377 Both SNP 0041.scaffold00154 700874 1 G A scaffold2377 Both INDEL 0041.scaffold00154 700922 1 . A scaffold2377 Both SNP 0041.scaffold00154 700944 1 T C scaffold2377 ReadM SNP 0041.scaffold00154 701161 1 A G - ReadM SNP 0041.scaffold00154 701188 1 T C - ReadM SNP 0041.scaffold00154 701252 1 C A - ReadM SNP 0041.scaffold00154 701289 1 C A - ReadM SNP 0041.scaffold00154 701337 1 G A - Both SNP 0041.scaffold00154 701420 1 C T scaffold2377 Both SNP 0041.scaffold00154 701446 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 701452 1 T A scaffold2377 ScafM INDEL 0041.scaffold00154 701480 25 ......................... TGCAAACATCTATTAGATAGATGTT scaffold2377 Both INDEL 0041.scaffold00154 701744 1 . A scaffold2377 Both SNP 0041.scaffold00154 702006 1 G A scaffold2377 Both SNP 0041.scaffold00154 702071 1 C G scaffold2377 Both SNP 0041.scaffold00154 702099 1 G T scaffold2377 Both SNP 0041.scaffold00154 702160 1 A G scaffold2377 ReadM SNP 0041.scaffold00154 702575 1 G A - ReadM SNP 0041.scaffold00154 702730 1 T C - ReadM SNP 0041.scaffold00154 702964 1 A T - ReadM INDEL 0041.scaffold00154 703015 1 . A - ReadM SNP 0041.scaffold00154 703083 1 T A - ReadM SNP 0041.scaffold00154 703087 1 G T - ReadM SNP 0041.scaffold00154 703147 1 A G - ReadM SNP 0041.scaffold00154 703389 1 T C - ReadM SNP 0041.scaffold00154 703604 1 C T - ReadM SNP 0041.scaffold00154 703781 1 C A - Both SNP 0041.scaffold00154 703826 1 G C scaffold2377 Both SNP 0041.scaffold00154 703860 1 G A scaffold2377 ScafM SNP 0041.scaffold00154 703874 1 A T scaffold2377 Both SNP 0041.scaffold00154 703950 1 T C scaffold2377 ScafM INDEL 0041.scaffold00154 704050 4 ATCG .... scaffold2377 Both SNP 0041.scaffold00154 704215 1 G A scaffold2377 Both SNP 0041.scaffold00154 704299 1 C G scaffold2377 Both SNP 0041.scaffold00154 704348 1 C T scaffold2377 ReadM SNP 0041.scaffold00154 704539 1 C T - ReadM SNP 0041.scaffold00154 704542 1 T C - ReadM SNP 0041.scaffold00154 704576 1 C G - ReadM SNP 0041.scaffold00154 704694 1 C A - ReadM SNP 0041.scaffold00154 704766 1 T A - Both SNP 0041.scaffold00154 704901 2 AG TT scaffold2377 Both SNP 0041.scaffold00154 704948 1 T A scaffold2377 Both SNP 0041.scaffold00154 705001 1 A T scaffold2377 Both INDEL 0041.scaffold00154 705073 1 . A scaffold2377 ReadM SNP 0041.scaffold00154 705318 1 A T - ReadM INDEL 0041.scaffold00154 705452 2 .. GA - ReadM SNP 0041.scaffold00154 705657 1 A G - ReadM SNP 0041.scaffold00154 705689 1 A G - ReadM SNP 0041.scaffold00154 705819 1 C A - ReadM SNP 0041.scaffold00154 705825 1 G T - ReadM SNP 0041.scaffold00154 705944 1 C G - ReadM INDEL 0041.scaffold00154 706189 1 . T - ReadM SNP 0041.scaffold00154 706394 1 C T - Both SNP 0041.scaffold00154 706447 1 T A scaffold2377 Both SNP 0041.scaffold00154 706458 1 G A scaffold2377 Both SNP 0041.scaffold00154 706496 1 A G scaffold2377 Both SNP 0041.scaffold00154 706501 1 G T scaffold2377 Both SNP 0041.scaffold00154 706625 1 C G scaffold2377 ReadM SNP 0041.scaffold00154 706675 1 G A - ReadM SNP 0041.scaffold00154 706998 1 A G - ReadM SNP 0041.scaffold00154 707004 1 T C - ReadM SNP 0041.scaffold00154 707082 1 A C - ReadM SNP 0041.scaffold00154 707118 1 A G - ReadM SNP 0041.scaffold00154 707132 1 A G - ScafM SNP 0041.scaffold00154 707302 1 C T scaffold2377 ScafM SNP 0041.scaffold00154 707308 1 A G scaffold2377 ReadM SNP 0041.scaffold00154 707496 1 A T - ScafM INDEL 0041.scaffold00154 707556 1 T . scaffold2377 ScafM INDEL 0041.scaffold00154 707593 20 GATGAGCGACGGTGGTGACG .................... scaffold2377 ScafM INDEL 0041.scaffold00154 707614 7 TTTTTTC ....... scaffold2377 ScafM SNP 0041.scaffold00154 707630 1 G A scaffold2377 ScafM SNP 0041.scaffold00154 707643 1 A C scaffold2377 ScafM SNP 0041.scaffold00154 707766 1 T C scaffold2377 ReadM SNP 0041.scaffold00154 708074 1 A T - ReadM INDEL 0041.scaffold00154 708149 1 . T - ReadM SNP 0041.scaffold00154 708208 1 C A - ReadM SNP 0041.scaffold00154 708264 1 C A - ReadM SNP 0041.scaffold00154 708346 1 G T - ReadM SNP 0041.scaffold00154 708420 1 C T - ReadM SNP 0041.scaffold00154 708450 1 G C - ReadM SNP 0041.scaffold00154 708469 1 C G - ReadM SNP 0041.scaffold00154 708651 1 C A - ReadM SNP 0041.scaffold00154 708656 1 C T - ReadM SNP 0041.scaffold00154 708760 1 A C - Both SNP 0041.scaffold00154 709102 1 T G scaffold2377 Both SNP 0041.scaffold00154 709389 1 T G scaffold2377 Both SNP 0041.scaffold00154 709417 1 A G scaffold2377 ReadM SNP 0041.scaffold00154 709461 1 T C - Both SNP 0041.scaffold00154 709612 1 G A scaffold2377 Both SNP 0041.scaffold00154 709742 1 G T scaffold2377 Both INDEL 0041.scaffold00154 709819 1 T . scaffold2377 Both SNP 0041.scaffold00154 709834 1 G A scaffold2377 Both INDEL 0041.scaffold00154 709857 2 TT .. scaffold2377 Both SNP 0041.scaffold00154 709955 1 C G scaffold2377 Both SNP 0041.scaffold00154 710044 1 T C scaffold2377 ReadM SNP 0041.scaffold00154 710070 1 A C - ReadM SNP 0041.scaffold00154 710091 1 T C - ReadM SNP 0041.scaffold00154 710182 1 G T - ReadM SNP 0041.scaffold00154 710210 1 C G - ReadM SNP 0041.scaffold00154 710657 1 G A - ReadM SNP 0041.scaffold00154 710713 1 T C - ReadM INDEL 0041.scaffold00154 710725 1 . A - ReadM SNP 0041.scaffold00154 710863 1 C T - ReadM SNP 0041.scaffold00154 711027 1 G A - ReadM SNP 0041.scaffold00154 711216 1 G A - ReadM SNP 0041.scaffold00154 711268 1 C T - ReadM SNP 0041.scaffold00154 711320 1 G A - ReadM SNP 0041.scaffold00154 711402 1 C T - ReadM SNP 0041.scaffold00154 711423 1 C T - ReadM SNP 0041.scaffold00154 711663 1 C G - ReadM SNP 0041.scaffold00154 711710 1 C T - ReadM SNP 0041.scaffold00154 711724 1 A C - Both SNP 0041.scaffold00154 711832 1 T C scaffold2377 Both SNP 0041.scaffold00154 711941 1 C A scaffold2377 Both SNP 0041.scaffold00154 712043 1 G A scaffold2377 Both INDEL 0041.scaffold00154 712099 2 TT .. scaffold2377 Both SNP 0041.scaffold00154 712141 1 A G scaffold2377 Both SNP 0041.scaffold00154 712164 1 T A scaffold2377 Both SNP 0041.scaffold00154 712210 1 T C scaffold2377 ReadM SNP 0041.scaffold00154 712286 1 A G - Both SNP 0041.scaffold00154 712457 1 A G scaffold2377 Both SNP 0041.scaffold00154 712459 1 A C scaffold2377 Both SNP 0041.scaffold00154 712637 1 C G scaffold2377 Both SNP 0041.scaffold00154 712667 1 G A scaffold2377 Both SNP 0041.scaffold00154 712863 1 A T scaffold2377 Both SNP 0041.scaffold00154 712927 1 A G scaffold2377 Both SNP 0041.scaffold00154 712932 1 G C scaffold2377 ReadM SNP 0041.scaffold00154 713178 1 C T - ReadM SNP 0041.scaffold00154 713197 1 G A - ReadM SNP 0041.scaffold00154 713349 2 TT AC - ReadM SNP 0041.scaffold00154 713468 1 T C - ReadM SNP 0041.scaffold00154 713514 1 A G - ReadM SNP 0041.scaffold00154 713544 1 G A - Both SNP 0041.scaffold00154 713640 1 C T scaffold2377 Both SNP 0041.scaffold00154 713749 1 G C scaffold2377 Both SNP 0041.scaffold00154 713754 1 A C scaffold2377 ScafM SNP 0041.scaffold00154 713861 2 CC AT scaffold2377 Both SNP 0041.scaffold00154 713933 1 T C scaffold2377 Both SNP 0041.scaffold00154 713938 1 A T scaffold2377 Both SNP 0041.scaffold00154 713999 1 C A scaffold2377 Both SNP 0041.scaffold00154 714020 1 C G scaffold2377 Both SNP 0041.scaffold00154 714140 1 T C scaffold2377 Both SNP 0041.scaffold00154 714151 1 C T scaffold2377 ReadM SNP 0041.scaffold00154 714270 1 T G - ReadM SNP 0041.scaffold00154 714272 1 T C - ReadM SNP 0041.scaffold00154 714336 1 G A - ReadM SNP 0041.scaffold00154 714419 1 T C - ReadM SNP 0041.scaffold00154 714522 1 A G - ReadM SNP 0041.scaffold00154 714545 1 C T - ReadM SNP 0041.scaffold00154 714550 1 A C - ReadM SNP 0041.scaffold00154 714609 1 C T - Both SNP 0041.scaffold00154 714664 1 A G scaffold2377 ScafM INDEL 0041.scaffold00154 714725 4 .... GGGA scaffold2377 ScafM SNP 0041.scaffold00154 714746 1 A G scaffold2377 ScafM SNP 0041.scaffold00154 714761 1 C G scaffold2377 ScafM SNP 0041.scaffold00154 714814 1 T C scaffold2377 ScafM SNP 0041.scaffold00154 714839 1 G A scaffold2377 ReadM SNP 0041.scaffold00154 715059 1 C T - ReadM SNP 0041.scaffold00154 715115 1 C A - ReadM SNP 0041.scaffold00154 715132 1 C T - ScafM SNP 0041.scaffold00154 715182 1 A C scaffold10145 ScafM SNP 0041.scaffold00154 715196 1 A T scaffold10145 ScafM SNP 0041.scaffold00154 715201 1 T A scaffold10145 ScafM SNP 0041.scaffold00154 715439 1 G A scaffold10145 ScafM SNP 0041.scaffold00154 715574 1 G C scaffold10145 ScafM SNP 0041.scaffold00154 715610 1 G A scaffold10145 Both SNP 0041.scaffold00154 715621 1 C T scaffold10145 Both SNP 0041.scaffold00154 715826 1 T C scaffold10145 Both SNP 0041.scaffold00154 715971 1 G A scaffold10145 Both SNP 0041.scaffold00154 716392 1 G A scaffold10145 Both INDEL 0041.scaffold00154 716555 1 . A scaffold10145 Both SNP 0041.scaffold00154 716827 1 C T scaffold10145 Both SNP 0041.scaffold00154 716941 1 G C scaffold10145 Both SNP 0041.scaffold00154 717207 1 A G scaffold10145 ReadM INDEL 0041.scaffold00154 717262 1 . C - ReadM SNP 0041.scaffold00154 717295 1 T G - ReadM INDEL 0041.scaffold00154 717353 1 T . - Both SNP 0041.scaffold00154 717561 1 A T scaffold10145 ScafM INDEL 0041.scaffold00154 717570 4 .... AAAT scaffold10145 ScafM INDEL 0041.scaffold00154 717614 8 CTGTTATG ........ scaffold10145 Both SNP 0041.scaffold00154 717662 1 G C scaffold10145 Both SNP 0041.scaffold00154 717671 1 A G scaffold10145 Both SNP 0041.scaffold00154 717739 1 T G scaffold10145 ScafM INDEL 0041.scaffold00154 717750 23 AACTTGTGCGTGGGACTTGGACT ....................... scaffold10145 Both SNP 0041.scaffold00154 717871 1 A T scaffold10145 Both SNP 0041.scaffold00154 717897 1 A G scaffold10145 ScafM SNP 0041.scaffold00154 717914 1 C T scaffold10145 ScafM INDEL 0041.scaffold00154 717923 2 .G AT scaffold10145 ScafM SNP 0041.scaffold00154 717963 1 G A scaffold10145 ScafM SNP 0041.scaffold00154 717966 1 C T scaffold10145 Both SNP 0041.scaffold00154 717995 1 C T scaffold10145 Both SNP 0041.scaffold00154 718025 1 G T scaffold10145 Both SNP 0041.scaffold00154 718178 1 A G scaffold10145 Both SNP 0041.scaffold00154 718252 1 G A scaffold10145 Both SNP 0041.scaffold00154 718256 1 A G scaffold10145 Both SNP 0041.scaffold00154 718333 1 G A scaffold10145 Both SNP 0041.scaffold00154 718560 1 C G scaffold10145 Both SNP 0041.scaffold00154 718625 1 C T scaffold10145 Both SNP 0041.scaffold00154 718889 1 A T scaffold10145 ScafM SNP 0041.scaffold00154 719059 1 T C scaffold10145 ScafM SNP 0041.scaffold00154 724229 1 T A scaffold10145 ScafM SNP 0041.scaffold00154 724377 1 T G scaffold10145 ScafM SNP 0041.scaffold00154 724405 1 A G scaffold10145 ScafM SNP 0041.scaffold00154 724423 1 G T scaffold10145 ScafM SNP 0041.scaffold00154 724481 1 C T scaffold10145 Both SNP 0041.scaffold00154 724716 1 G A scaffold10145 Both INDEL 0041.scaffold00154 724833 1 A . scaffold10145 Both INDEL 0041.scaffold00154 724947 3 ATG ... scaffold10145 Both SNP 0041.scaffold00154 725009 1 C G scaffold10145 Both SNP 0041.scaffold00154 725123 1 C A scaffold10145 Both SNP 0041.scaffold00154 725141 1 C A scaffold10145 Both SNP 0041.scaffold00154 725145 1 C G scaffold10145 Both SNP 0041.scaffold00154 725221 1 G A scaffold10145 Both SNP 0041.scaffold00154 725292 1 T A scaffold10145 Both SNP 0041.scaffold00154 725338 1 C T scaffold10145 ScafM SNP 0041.scaffold00154 725397 1 A G scaffold10145 ScafM SNP 0041.scaffold00154 725404 2 AA GG scaffold10145 Both SNP 0041.scaffold00154 725426 1 T G scaffold10145 Both SNP 0041.scaffold00154 725458 1 T C scaffold10145 Both SNP 0041.scaffold00154 725527 1 T C scaffold10145 Both SNP 0041.scaffold00154 725565 1 T C scaffold10145 Both SNP 0041.scaffold00154 725567 1 G C scaffold10145 Both SNP 0041.scaffold00154 725590 1 A G scaffold10145 Both SNP 0041.scaffold00154 725617 1 G C scaffold10145 Both SNP 0041.scaffold00154 725670 1 C T scaffold10145 Both SNP 0041.scaffold00154 725734 1 T C scaffold10145 Both SNP 0041.scaffold00154 725756 1 A C scaffold10145 Both SNP 0041.scaffold00154 725837 1 C A scaffold10145 ScafM SNP 0041.scaffold00154 727712 1 A G scaffold10145 ReadM SNP 0041.scaffold00154 729333 1 G A - ReadM SNP 0041.scaffold00154 729345 1 A C - ReadM SNP 0041.scaffold00154 729492 1 A G - ReadM SNP 0041.scaffold00154 729513 1 A G - ReadM SNP 0041.scaffold00154 729674 1 A T - ReadM SNP 0041.scaffold00154 729718 1 G T - ReadM SNP 0041.scaffold00154 729734 1 C A - ScafM SNP 0041.scaffold00154 729814 1 G C scaffold10145 ScafM SNP 0041.scaffold00154 729816 1 C G scaffold10145 Both SNP 0041.scaffold00154 729918 1 C G scaffold10145 Both SNP 0041.scaffold00154 729963 1 A C scaffold10145 Both SNP 0041.scaffold00154 730142 1 C T scaffold10145 Both SNP 0041.scaffold00154 730160 1 C A scaffold10145 Both INDEL 0041.scaffold00154 730244 1 A . scaffold10145 ReadM SNP 0041.scaffold00154 730397 1 G A - ReadM SNP 0041.scaffold00154 730460 1 C T - ReadM SNP 0041.scaffold00154 730474 1 T C - ReadM SNP 0041.scaffold00154 730583 1 A G - ReadM SNP 0041.scaffold00154 730630 1 C G - ReadM SNP 0041.scaffold00154 730637 1 A G - ReadM SNP 0041.scaffold00154 730658 1 C T - ReadM SNP 0041.scaffold00154 730713 1 C T - ReadM SNP 0041.scaffold00154 730763 1 G T - ReadM SNP 0041.scaffold00154 730866 1 C A - ReadM SNP 0041.scaffold00154 731183 1 C T - ReadM SNP 0041.scaffold00154 731192 1 A G - ReadM SNP 0041.scaffold00154 731256 1 C A - Both SNP 0041.scaffold00154 731385 1 A G scaffold10145 Both SNP 0041.scaffold00154 731405 1 C G scaffold10145 Both SNP 0041.scaffold00154 731423 1 T C scaffold10145 Both SNP 0041.scaffold00154 731437 1 T C scaffold10145 ScafM SNP 0041.scaffold00154 731507 1 T C scaffold10145 Both SNP 0041.scaffold00154 731569 1 T G scaffold10145 ReadM SNP 0041.scaffold00154 731711 1 G C - ReadM SNP 0041.scaffold00154 731844 1 T C - ReadM SNP 0041.scaffold00154 732002 1 A G - ReadM SNP 0041.scaffold00154 732013 1 T G - ReadM SNP 0041.scaffold00154 732063 1 T G - ReadM SNP 0041.scaffold00154 734446 1 T G - ReadM SNP 0041.scaffold00154 734507 1 A T - ReadM SNP 0041.scaffold00154 734857 1 A C - ReadM SNP 0041.scaffold00154 734986 1 C A - ReadM SNP 0041.scaffold00154 735854 1 A G - ReadM SNP 0041.scaffold00154 736025 1 A G - ReadM SNP 0041.scaffold00154 736078 1 T C - ReadM SNP 0041.scaffold00154 736150 1 T G - ReadM SNP 0041.scaffold00154 736170 1 A C - ReadM SNP 0041.scaffold00154 736206 1 T C - ReadM SNP 0041.scaffold00154 736310 1 C T - ReadM SNP 0041.scaffold00154 736313 1 T A - ReadM SNP 0041.scaffold00154 736358 1 A G - ReadM SNP 0041.scaffold00154 736651 1 T C - ReadM SNP 0041.scaffold00154 736669 1 A G - ReadM SNP 0041.scaffold00154 736745 1 G T - ReadM SNP 0041.scaffold00154 736752 1 T A - ReadM SNP 0041.scaffold00154 736763 1 A G - ReadM SNP 0041.scaffold00154 736917 1 A G - ReadM SNP 0041.scaffold00154 736970 1 A G - ReadM SNP 0041.scaffold00154 737063 1 A G - ReadM SNP 0041.scaffold00154 737110 1 T A - ReadM SNP 0041.scaffold00154 737160 1 G T - ReadM SNP 0041.scaffold00154 737203 1 A T - Both SNP 0041.scaffold00154 737319 1 A G scaffold10145 ReadM SNP 0041.scaffold00154 737401 1 T C - ReadM SNP 0041.scaffold00154 737410 1 A G - ReadM SNP 0041.scaffold00154 737415 1 C A - ReadM SNP 0041.scaffold00154 737503 1 G A - ScafM SNP 0041.scaffold00154 737846 1 A T scaffold10145 Both SNP 0041.scaffold00154 737960 1 C A scaffold10145 Both SNP 0041.scaffold00154 738001 1 A G scaffold10145 ReadM INDEL 0041.scaffold00154 738230 1 A . - ReadM SNP 0041.scaffold00154 738245 1 C G - ReadM SNP 0041.scaffold00154 738271 1 G C - ReadM SNP 0041.scaffold00154 738393 1 C T - ReadM SNP 0041.scaffold00154 738421 1 G T - ReadM SNP 0041.scaffold00154 738712 1 C T - ReadM INDEL 0041.scaffold00154 738816 1 T . - ReadM SNP 0041.scaffold00154 738837 1 A T - ReadM SNP 0041.scaffold00154 738840 1 C A - ReadM SNP 0041.scaffold00154 738874 1 T A - ReadM SNP 0041.scaffold00154 738883 1 C A - ReadM SNP 0041.scaffold00154 738948 1 C G - ReadM SNP 0041.scaffold00154 738981 1 A C - ReadM SNP 0041.scaffold00154 739034 1 G A - ReadM SNP 0041.scaffold00154 739061 1 G A - ReadM SNP 0041.scaffold00154 739101 1 T G - ReadM SNP 0041.scaffold00154 739189 1 A G - ReadM SNP 0041.scaffold00154 739255 1 C A - ReadM SNP 0041.scaffold00154 739284 1 A G - ReadM SNP 0041.scaffold00154 739439 1 C A - ReadM SNP 0041.scaffold00154 739443 1 C T - ReadM SNP 0041.scaffold00154 739549 1 A G - ReadM SNP 0041.scaffold00154 739625 1 C T - ReadM SNP 0041.scaffold00154 739634 1 G T - ReadM SNP 0041.scaffold00154 739722 1 G A - ReadM SNP 0041.scaffold00154 739795 1 A G - ReadM SNP 0041.scaffold00154 739855 1 G A - ReadM SNP 0041.scaffold00154 739942 1 C T - ReadM SNP 0041.scaffold00154 740152 1 G T - ReadM SNP 0041.scaffold00154 740229 1 C T - ReadM SNP 0041.scaffold00154 740279 1 C T - ReadM SNP 0041.scaffold00154 740368 2 GG TA - ReadM INDEL 0041.scaffold00154 740505 1 A . - ReadM SNP 0041.scaffold00154 740548 1 G A - ReadM SNP 0041.scaffold00154 740610 1 A G - ReadM SNP 0041.scaffold00154 740745 1 T C - ReadM SNP 0041.scaffold00154 740748 1 G A - ReadM INDEL 0041.scaffold00154 740862 1 G . - ReadM SNP 0041.scaffold00154 740946 1 A G - ReadM SNP 0041.scaffold00154 741026 1 A G - ReadM SNP 0041.scaffold00154 741083 1 T C - ReadM SNP 0041.scaffold00154 741102 1 C T - ReadM SNP 0041.scaffold00154 741167 1 G A - ReadM SNP 0041.scaffold00154 741256 1 T G - ReadM SNP 0041.scaffold00154 741437 1 A G - ReadM SNP 0041.scaffold00154 741555 1 T A - ReadM SNP 0041.scaffold00154 741584 1 A G - ReadM SNP 0041.scaffold00154 741689 1 G T - ReadM SNP 0041.scaffold00154 741741 1 T G - ReadM SNP 0041.scaffold00154 741873 1 A C - ReadM SNP 0041.scaffold00154 742038 1 T A - ReadM SNP 0041.scaffold00154 742042 1 G A - ReadM SNP 0041.scaffold00154 742085 1 G A - ReadM SNP 0041.scaffold00154 742112 1 C G - ReadM SNP 0041.scaffold00154 742125 1 C T - ReadM INDEL 0041.scaffold00154 742216 1 . T - ReadM SNP 0041.scaffold00154 742240 1 G C - ReadM SNP 0041.scaffold00154 742284 1 G A - ReadM SNP 0041.scaffold00154 742507 1 A G - ReadM SNP 0041.scaffold00154 742573 1 C T - ReadM SNP 0041.scaffold00154 742787 1 T C - ReadM SNP 0041.scaffold00154 742801 1 T A - ReadM SNP 0041.scaffold00154 742806 1 T G - ReadM SNP 0041.scaffold00154 742820 1 T C - ReadM SNP 0041.scaffold00154 742922 1 C A - ReadM SNP 0041.scaffold00154 742942 1 C G - ReadM SNP 0041.scaffold00154 743015 1 A G - ReadM SNP 0041.scaffold00154 743050 1 G A - ReadM SNP 0041.scaffold00154 743116 1 A T - ReadM SNP 0041.scaffold00154 743147 1 G A - ReadM SNP 0041.scaffold00154 743320 1 A G - ReadM SNP 0041.scaffold00154 743323 1 C T - ReadM SNP 0041.scaffold00154 743444 1 A G - ReadM SNP 0041.scaffold00154 743457 1 T A - ReadM SNP 0041.scaffold00154 743706 1 A C - ReadM SNP 0041.scaffold00154 743710 1 A C - ReadM SNP 0041.scaffold00154 743724 1 A T - ReadM SNP 0041.scaffold00154 743729 1 C T - ReadM SNP 0041.scaffold00154 744084 1 T G - ReadM SNP 0041.scaffold00154 744241 1 A G - ReadM SNP 0041.scaffold00154 744245 1 T A - ReadM SNP 0041.scaffold00154 744410 1 A G - ReadM SNP 0041.scaffold00154 744509 1 C T - ReadM SNP 0041.scaffold00154 744591 1 T G - ReadM SNP 0041.scaffold00154 744652 1 C T - ReadM SNP 0041.scaffold00154 744773 1 A C - ReadM SNP 0041.scaffold00154 744877 1 T G - ReadM SNP 0041.scaffold00154 744886 1 T C - ReadM SNP 0041.scaffold00154 744904 1 G A - ReadM SNP 0041.scaffold00154 745041 1 T A - ReadM SNP 0041.scaffold00154 745194 2 AA CG - ReadM SNP 0041.scaffold00154 745239 1 G A - ReadM SNP 0041.scaffold00154 745265 1 A C - ReadM SNP 0041.scaffold00154 745277 1 G A - ReadM SNP 0041.scaffold00154 745295 1 C A - ReadM SNP 0041.scaffold00154 745375 1 G C - ReadM SNP 0041.scaffold00154 745511 1 C A - Both SNP 0041.scaffold00154 745603 1 A T scaffold10145 ReadM SNP 0041.scaffold00154 745831 1 T A - ReadM SNP 0041.scaffold00154 745834 1 C T - ReadM SNP 0041.scaffold00154 745845 1 C T - ReadM SNP 0041.scaffold00154 745892 1 G C - ReadM SNP 0041.scaffold00154 746047 1 A T - ReadM SNP 0041.scaffold00154 746077 1 G T - ReadM SNP 0041.scaffold00154 746089 1 C A - ReadM SNP 0041.scaffold00154 746136 1 C G - ReadM SNP 0041.scaffold00154 746197 1 G A - ReadM SNP 0041.scaffold00154 746264 1 A G - ScafM INDEL 0041.scaffold00154 746288 1 G . scaffold2795 ScafM SNP 0041.scaffold00154 746291 2 TA AC scaffold2795 ScafM SNP 0041.scaffold00154 746294 1 G T scaffold2795 ScafM SNP 0041.scaffold00154 746316 1 G A scaffold2795 ScafM SNP 0041.scaffold00154 746320 2 TT AC scaffold2795 Both SNP 0041.scaffold00154 746387 1 A C scaffold28689 Both SNP 0041.scaffold00154 746395 1 T C scaffold28689 ScafM SNP 0041.scaffold00154 746400 1 A G scaffold28689 Both SNP 0041.scaffold00154 746417 1 T C scaffold28689 ScafM SNP 0041.scaffold00154 746436 1 C T scaffold28689 ScafM SNP 0041.scaffold00154 746456 1 T C scaffold28689 ScafM SNP 0041.scaffold00154 746468 1 C T scaffold28689 ReadM SNP 0041.scaffold00154 746485 1 T A - ScafM SNP 0041.scaffold00154 746489 1 C A scaffold28689 ScafM SNP 0041.scaffold00154 746505 1 C T scaffold28689 ScafM SNP 0041.scaffold00154 746540 1 T G scaffold28689 ScafM SNP 0041.scaffold00154 746546 1 C T scaffold28689 ReadM SNP 0041.scaffold00154 746578 1 C A - ReadM SNP 0041.scaffold00154 746648 1 C G - ReadM SNP 0041.scaffold00154 746808 1 G A - ReadM SNP 0041.scaffold00154 746817 1 T A - ReadM SNP 0041.scaffold00154 746890 1 T C - ReadM SNP 0041.scaffold00154 746912 1 C T - ReadM SNP 0041.scaffold00154 746958 1 A G - ReadM SNP 0041.scaffold00154 746966 1 G A - ReadM SNP 0041.scaffold00154 747026 1 C T - ReadM SNP 0041.scaffold00154 747051 1 C T - ReadM SNP 0041.scaffold00154 747070 1 C G - ReadM SNP 0041.scaffold00154 747119 1 A G - ReadM SNP 0041.scaffold00154 747244 1 A C - ReadM SNP 0041.scaffold00154 747619 1 G T - ReadM SNP 0041.scaffold00154 747657 1 T C - ReadM SNP 0041.scaffold00154 747732 1 A G - ReadM SNP 0041.scaffold00154 747807 1 G A - ReadM SNP 0041.scaffold00154 747811 1 T A - ReadM SNP 0041.scaffold00154 747994 1 C A - ReadM SNP 0041.scaffold00154 748099 1 G T - ReadM INDEL 0041.scaffold00154 748395 1 T . - ReadM SNP 0041.scaffold00154 748483 1 T G - ReadM INDEL 0041.scaffold00154 748494 1 . T - ReadM SNP 0041.scaffold00154 748699 1 T C - ReadM SNP 0041.scaffold00154 748709 1 G A - Both SNP 0041.scaffold00154 748758 1 A T scaffold10145 Both SNP 0041.scaffold00154 748785 1 C T scaffold10145 ReadM SNP 0041.scaffold00154 748892 1 T G - ReadM SNP 0041.scaffold00154 748941 1 A T - ReadM SNP 0041.scaffold00154 748981 1 G A - ReadM SNP 0041.scaffold00154 749005 1 C T - ReadM SNP 0041.scaffold00154 749077 1 A G - ReadM SNP 0041.scaffold00154 749681 1 T C - ReadM SNP 0041.scaffold00154 749743 1 T C - ReadM INDEL 0041.scaffold00154 749797 2 TT .. - ReadM SNP 0041.scaffold00154 749905 1 G A - ReadM SNP 0041.scaffold00154 749907 1 T A - ReadM SNP 0041.scaffold00154 749944 1 A G - ReadM SNP 0041.scaffold00154 749997 1 A G - Both SNP 0041.scaffold00154 750100 1 A C scaffold10145 Both SNP 0041.scaffold00154 750145 1 A T scaffold10145 Both SNP 0041.scaffold00154 750463 1 C T scaffold10145 Both SNP 0041.scaffold00154 750471 1 G A scaffold10145 ScafM SNP 0041.scaffold00154 750609 1 A C scaffold10145 ScafM SNP 0041.scaffold00154 750636 1 G T scaffold10145 Both SNP 0041.scaffold00154 750704 1 G A scaffold10145 ScafM SNP 0041.scaffold00154 750722 1 T C scaffold10145 Both SNP 0041.scaffold00154 750793 1 A G scaffold10145 Both SNP 0041.scaffold00154 750814 1 A G scaffold10145 ScafM INDEL 0041.scaffold00154 750904 30 ATAAGGATGAGCCTTATTCCATTCAAAGTG .............................. scaffold10145 Both INDEL 0041.scaffold00154 751002 1 T . scaffold10145 Both SNP 0041.scaffold00154 751025 1 A G scaffold10145 ScafM SNP 0041.scaffold00154 751097 1 A G scaffold10145 ScafM SNP 0041.scaffold00154 751132 2 GG AA scaffold10145 Both SNP 0041.scaffold00154 751149 1 G A scaffold10145 Both SNP 0041.scaffold00154 751218 1 G A scaffold10145 Both SNP 0041.scaffold00154 751324 1 T C scaffold10145 Both SNP 0041.scaffold00154 751366 1 A G scaffold10145 Both SNP 0041.scaffold00154 751387 1 A T scaffold10145 Both SNP 0041.scaffold00154 751445 1 C T scaffold10145 Both SNP 0041.scaffold00154 751536 1 A G scaffold10145 Both SNP 0041.scaffold00154 751726 1 T C scaffold10145 Both SNP 0041.scaffold00154 751838 1 A G scaffold10145 Both SNP 0041.scaffold00154 752042 1 T C scaffold10145 Both SNP 0041.scaffold00154 752053 1 C T scaffold10145 Both SNP 0041.scaffold00154 752164 1 C T scaffold10145 Both SNP 0041.scaffold00154 752609 1 G C scaffold10145 Both SNP 0041.scaffold00154 752680 1 T A scaffold10145 Both SNP 0041.scaffold00154 752787 1 C A scaffold10145 Both SNP 0041.scaffold00154 752843 1 G T scaffold10145 Both SNP 0041.scaffold00154 752927 1 C A scaffold10145 Both SNP 0041.scaffold00154 752996 1 A G scaffold10145 Both SNP 0041.scaffold00154 753032 1 C T scaffold10145 Both SNP 0041.scaffold00154 753323 1 G A scaffold10145 Both SNP 0041.scaffold00154 753326 1 C T scaffold10145 Both SNP 0041.scaffold00154 753355 1 C A scaffold10145 Both SNP 0041.scaffold00154 753413 1 G A scaffold10145 ReadM SNP 0041.scaffold00154 753435 1 C G - ReadM SNP 0041.scaffold00154 753448 1 C G - Both SNP 0041.scaffold00154 753697 1 T C scaffold10145 Both SNP 0041.scaffold00154 753799 1 T A scaffold10145 Both SNP 0041.scaffold00154 753825 1 G T scaffold10145 Both SNP 0041.scaffold00154 753837 1 T C scaffold10145 Both SNP 0041.scaffold00154 753883 1 G C scaffold10145 Both SNP 0041.scaffold00154 753945 1 C T scaffold10145 ReadM INDEL 0041.scaffold00154 753999 1 A . - ScafM INDEL 0041.scaffold00154 754066 1 C . scaffold10145 ScafM INDEL 0041.scaffold00154 754119 13 ............. CTTTTATGGTAAA scaffold10145 Both INDEL 0041.scaffold00154 754135 1 . A scaffold10145 Both SNP 0041.scaffold00154 754230 1 T G scaffold10145 Both INDEL 0041.scaffold00154 754252 1 . T scaffold10145 Both SNP 0041.scaffold00154 754288 1 A T scaffold10145 Both SNP 0041.scaffold00154 754320 1 G A scaffold10145 Both SNP 0041.scaffold00154 754364 1 C G scaffold10145 ReadM SNP 0041.scaffold00154 754470 1 T A - ReadM SNP 0041.scaffold00154 754513 1 G T - ReadM SNP 0041.scaffold00154 754576 1 C T - ReadM SNP 0041.scaffold00154 754648 1 A G - ReadM INDEL 0041.scaffold00154 754675 1 . A - ReadM SNP 0041.scaffold00154 754699 1 G A - ReadM SNP 0041.scaffold00154 754705 1 T G - ReadM SNP 0041.scaffold00154 754824 1 G A - ReadM SNP 0041.scaffold00154 754866 1 C A - ReadM SNP 0041.scaffold00154 754915 1 A G - ReadM SNP 0041.scaffold00154 754929 1 G A - ReadM SNP 0041.scaffold00154 754968 1 C T - ReadM SNP 0041.scaffold00154 755009 1 T A - ReadM SNP 0041.scaffold00154 755148 1 G A - ReadM INDEL 0041.scaffold00154 755174 1 T . - Both SNP 0041.scaffold00154 755380 1 G A scaffold10145 ReadM SNP 0041.scaffold00154 755434 1 G T - ReadM SNP 0041.scaffold00154 755465 1 T C - ReadM SNP 0041.scaffold00154 755479 1 A G - ReadM SNP 0041.scaffold00154 755647 1 T C - ReadM SNP 0041.scaffold00154 756246 1 A C - ReadM SNP 0041.scaffold00154 756311 1 A T - ReadM SNP 0041.scaffold00154 756363 1 T G - ReadM SNP 0041.scaffold00154 756448 1 G C - ReadM SNP 0041.scaffold00154 756453 1 C T - ReadM SNP 0041.scaffold00154 756513 1 T A - ReadM SNP 0041.scaffold00154 756592 1 G A - Both SNP 0041.scaffold00154 756652 1 A G scaffold10145 Both SNP 0041.scaffold00154 756691 1 G C scaffold10145 ReadM SNP 0041.scaffold00154 756782 1 G A - ReadM SNP 0041.scaffold00154 756945 1 A G - ReadM SNP 0041.scaffold00154 757006 1 T C - ReadM INDEL 0041.scaffold00154 757167 1 C . - ReadM SNP 0041.scaffold00154 757231 1 T G - ReadM SNP 0041.scaffold00154 757430 1 C T - ReadM SNP 0041.scaffold00154 757486 1 T G - ReadM SNP 0041.scaffold00154 757626 1 G A - ReadM SNP 0041.scaffold00154 757731 1 T G - ReadM SNP 0041.scaffold00154 757795 1 T C - ReadM SNP 0041.scaffold00154 757800 1 T C - ReadM SNP 0041.scaffold00154 757919 1 G T - ScafM SNP 0041.scaffold00154 758217 1 A T scaffold10145 ScafM INDEL 0041.scaffold00154 758222 11 ATTTTAAACGC ........... scaffold10145 Both SNP 0041.scaffold00154 758253 1 G T scaffold10145 ReadM SNP 0041.scaffold00154 758380 1 G A - Both SNP 0041.scaffold00154 758392 1 T C scaffold10145 Both SNP 0041.scaffold00154 758431 1 G A scaffold10145 Both INDEL 0041.scaffold00154 758519 2 .. CA scaffold10145 Both SNP 0041.scaffold00154 758551 1 T G scaffold10145 ScafM INDEL 0041.scaffold00154 758740 1 T . scaffold10145 ScafM SNP 0041.scaffold00154 758761 1 A C scaffold10145 ScafM SNP 0041.scaffold00154 758781 1 C T scaffold10145 ReadM SNP 0041.scaffold00154 758862 1 C A - ReadM SNP 0041.scaffold00154 759044 1 C T - ReadM SNP 0041.scaffold00154 759518 1 A G - ReadM SNP 0041.scaffold00154 759745 1 A G - ReadM SNP 0041.scaffold00154 759806 1 A T - ReadM SNP 0041.scaffold00154 759833 1 A C - ReadM INDEL 0041.scaffold00154 759979 1 G . - ReadM SNP 0041.scaffold00154 760056 1 A T - Both SNP 0041.scaffold00154 760133 1 A G scaffold10145 Both SNP 0041.scaffold00154 760143 1 G T scaffold10145 Both SNP 0041.scaffold00154 760520 1 C T scaffold10145 ScafM SNP 0041.scaffold00154 766102 1 A T scaffold5411 ScafM SNP 0041.scaffold00154 766105 1 C A scaffold5411 ScafM SNP 0041.scaffold00154 766156 1 A G scaffold5411 ScafM SNP 0041.scaffold00154 766231 1 A C scaffold5411 ScafM SNP 0041.scaffold00154 766237 1 A G scaffold5411 ReadM SNP 0041.scaffold00154 766311 1 T C - ReadM SNP 0041.scaffold00154 766371 1 A T - ReadM SNP 0041.scaffold00154 767112 1 T C - ScafM SNP 0041.scaffold00154 767777 1 T C scaffold5411 ScafM SNP 0041.scaffold00154 767839 1 A C scaffold5411 ScafM SNP 0041.scaffold00154 767841 1 C A scaffold5411 ScafM SNP 0041.scaffold00154 769804 1 C T scaffold40332 ScafM SNP 0041.scaffold00154 769822 1 C G scaffold40332 ScafM SNP 0041.scaffold00154 775413 1 G A scaffold22403 ScafM INDEL 0041.scaffold00154 775469 1 T . scaffold22403 ScafM INDEL 0041.scaffold00154 775473 1 . A scaffold22403 ScafM SNP 0041.scaffold00154 775483 1 C T scaffold22403 ScafM SNP 0041.scaffold00154 775597 1 G A scaffold22403 ScafM SNP 0041.scaffold00154 775601 1 A T scaffold22403 ScafM SNP 0041.scaffold00154 775632 1 G T scaffold22403 ScafM SNP 0041.scaffold00154 775635 1 T C scaffold22403 ScafM SNP 0041.scaffold00154 775653 1 G A scaffold22403 ReadM SNP 0041.scaffold00154 775838 1 A T - ScafM SNP 0041.scaffold00154 790401 1 C T scaffold13525 ScafM SNP 0041.scaffold00154 790437 1 C T scaffold13525 ScafM SNP 0041.scaffold00154 790480 1 T G scaffold13525 ScafM SNP 0041.scaffold00154 790553 2 TA CC scaffold13525 ScafM INDEL 0041.scaffold00154 790603 2 .T AA scaffold13525 ScafM SNP 0041.scaffold00154 790612 1 T G scaffold13525 ScafM SNP 0041.scaffold00154 790715 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 790750 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 790752 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 790765 1 G A scaffold13525 ScafM INDEL 0041.scaffold00154 790801 14 GTAATGCCACGTCA .............. scaffold13525 ScafM INDEL 0041.scaffold00154 790816 2 CG .. scaffold13525 ScafM SNP 0041.scaffold00154 790831 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 790851 1 T C scaffold13525 ScafM INDEL 0041.scaffold00154 790861 3 ... TTA scaffold13525 Both SNP 0041.scaffold00154 790892 1 T C scaffold13525 Both SNP 0041.scaffold00154 791172 1 T G scaffold13525 ReadM SNP 0041.scaffold00154 791658 1 C A - Both SNP 0041.scaffold00154 791749 1 A G scaffold13525 Both SNP 0041.scaffold00154 791758 1 G C scaffold13525 ScafM SNP 0041.scaffold00154 792003 1 G C scaffold13525 ScafM SNP 0041.scaffold00154 792005 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 792008 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 792014 1 A G scaffold13525 Both SNP 0041.scaffold00154 792088 1 A T scaffold13525 Both SNP 0041.scaffold00154 792166 1 G C scaffold13525 Both SNP 0041.scaffold00154 792236 1 A G scaffold13525 Both SNP 0041.scaffold00154 792298 1 T G scaffold13525 ReadM INDEL 0041.scaffold00154 792366 1 A . - ScafM SNP 0041.scaffold00154 792571 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 792586 1 G T scaffold13525 ScafM SNP 0041.scaffold00154 792629 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 792650 1 A C scaffold13525 ScafM INDEL 0041.scaffold00154 792679 30 TTCCTTTCAAAAAAAAAAATATGTTGCATA .............................. scaffold13525 ScafM SNP 0041.scaffold00154 794619 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 794655 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 794677 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 794708 1 C A scaffold13525 ScafM SNP 0041.scaffold00154 794753 1 G A scaffold13525 ReadM SNP 0041.scaffold00154 797888 1 T C - ReadM SNP 0041.scaffold00154 798045 1 T A - ReadM INDEL 0041.scaffold00154 798061 2 AA .. - ScafM SNP 0041.scaffold00154 798194 1 G C scaffold13525 ReadM SNP 0041.scaffold00154 798408 1 G A - ScafM SNP 0041.scaffold00154 799717 1 C A scaffold13525 ScafM SNP 0041.scaffold00154 799719 1 G T scaffold13525 ScafM SNP 0041.scaffold00154 799723 1 A T scaffold13525 ScafM INDEL 0041.scaffold00154 799768 4 .... ACTT scaffold13525 ScafM SNP 0041.scaffold00154 799859 1 C G scaffold13525 ReadM SNP 0041.scaffold00154 801625 1 C G - ScafM SNP 0041.scaffold00154 801984 2 TT GG scaffold13525 ReadM SNP 0041.scaffold00154 802072 1 T G - ReadM SNP 0041.scaffold00154 802083 1 G A - ScafM SNP 0041.scaffold00154 802284 1 A G scaffold13525 ScafM INDEL 0041.scaffold00154 802286 6 ...... GTTTAA scaffold13525 ScafM SNP 0041.scaffold00154 802302 1 T C scaffold13525 Both SNP 0041.scaffold00154 802314 1 C T scaffold13525 Both SNP 0041.scaffold00154 802381 1 T C scaffold13525 ReadM SNP 0041.scaffold00154 802387 1 T C - ScafM SNP 0041.scaffold00154 802590 1 A G scaffold13525 ScafM INDEL 0041.scaffold00154 802637 3 ..G ATT scaffold13525 ScafM SNP 0041.scaffold00154 802756 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 802759 1 C T scaffold13525 ScafM SNP 0041.scaffold00154 802763 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 802789 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 802832 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 802836 1 C G scaffold13525 ScafM INDEL 0041.scaffold00154 802869 1 T . scaffold13525 ScafM SNP 0041.scaffold00154 802902 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 802961 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 803325 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 803346 1 C T scaffold13525 ScafM SNP 0041.scaffold00154 803397 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 803406 1 G A scaffold13525 ScafM INDEL 0041.scaffold00154 803414 1 G . scaffold13525 ScafM SNP 0041.scaffold00154 803416 1 C A scaffold13525 ScafM SNP 0041.scaffold00154 803504 1 A T scaffold13525 ScafM SNP 0041.scaffold00154 803523 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 803526 2 AA CT scaffold13525 ScafM INDEL 0041.scaffold00154 803546 7 AAAATCA ....... scaffold13525 ScafM INDEL 0041.scaffold00154 803556 1 T . scaffold13525 ScafM INDEL 0041.scaffold00154 803558 1 G . scaffold13525 ScafM INDEL 0041.scaffold00154 803591 1 T . scaffold13525 ScafM INDEL 0041.scaffold00154 803601 3 TAT ... scaffold13525 ScafM INDEL 0041.scaffold00154 803617 2 TT .. scaffold13525 ScafM SNP 0041.scaffold00154 803634 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 803692 1 C G scaffold13525 ScafM SNP 0041.scaffold00154 803718 2 CA TG scaffold13525 ScafM SNP 0041.scaffold00154 803733 1 C T scaffold13525 ReadM SNP 0041.scaffold00154 803805 1 G C - ReadM SNP 0041.scaffold00154 803839 1 T A - ScafM INDEL 0041.scaffold00154 804093 1 . A scaffold13525 ScafM SNP 0041.scaffold00154 804095 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 804107 1 T G scaffold13525 ScafM SNP 0041.scaffold00154 804149 1 A G scaffold13525 ScafM INDEL 0041.scaffold00154 804177 1 C . scaffold13525 ScafM SNP 0041.scaffold00154 804186 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 804193 1 T C scaffold13525 ScafM SNP 0041.scaffold00154 804195 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 804201 1 G A scaffold13525 ScafM SNP 0041.scaffold00154 804225 1 A C scaffold13525 ScafM SNP 0041.scaffold00154 804249 1 T C scaffold13525 ScafM INDEL 0041.scaffold00154 804256 4 CCCG .... scaffold13525 ScafM INDEL 0041.scaffold00154 804268 1 C . scaffold13525 ScafM SNP 0041.scaffold00154 804288 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 804295 1 G T scaffold13525 ScafM SNP 0041.scaffold00154 804314 1 T C scaffold13525 ScafM INDEL 0041.scaffold00154 804342 8 TTCAAAAT ........ scaffold13525 ScafM INDEL 0041.scaffold00154 804351 7 TATGAGG ....... scaffold13525 ScafM SNP 0041.scaffold00154 804370 1 A G scaffold13525 ScafM SNP 0041.scaffold00154 804502 1 G T scaffold13525 ScafM INDEL 0041.scaffold00154 804625 33 ................................. TCCCCTCAAAAAAAAAAGTATAGAAGTATTATA scaffold13525 ScafM INDEL 0041.scaffold00154 804684 2 .. AT scaffold13525 ScafM INDEL 0041.scaffold00154 804686 1 . A scaffold13525 ScafM SNP 0041.scaffold00154 804737 1 G C scaffold13525 ScafM SNP 0041.scaffold00154 804887 1 C A scaffold6037 ScafM SNP 0041.scaffold00154 804899 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 804918 1 G C scaffold6037 ScafM SNP 0041.scaffold00154 804926 1 A G scaffold6037 ScafM SNP 0041.scaffold00154 804988 1 A G scaffold6037 ScafM SNP 0041.scaffold00154 805029 1 A G scaffold6037 ScafM INDEL 0041.scaffold00154 805121 8 TTATGTTG ........ scaffold6037 ScafM SNP 0041.scaffold00154 805160 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 805181 1 T C scaffold6037 ReadM SNP 0041.scaffold00154 805512 2 CC AT - ReadM SNP 0041.scaffold00154 805604 1 T G - ReadM SNP 0041.scaffold00154 805609 1 G T - ReadM SNP 0041.scaffold00154 805620 1 C A - ReadM SNP 0041.scaffold00154 805696 1 T A - ReadM SNP 0041.scaffold00154 805700 1 T C - ReadM SNP 0041.scaffold00154 805748 1 T A - ReadM SNP 0041.scaffold00154 805800 1 C T - ReadM SNP 0041.scaffold00154 805938 1 C G - ReadM SNP 0041.scaffold00154 805959 1 G A - ReadM SNP 0041.scaffold00154 806015 1 A G - ReadM SNP 0041.scaffold00154 806028 1 C T - ReadM SNP 0041.scaffold00154 806062 1 G A - ReadM SNP 0041.scaffold00154 806128 1 T C - ReadM SNP 0041.scaffold00154 806131 1 G A - ReadM SNP 0041.scaffold00154 806178 1 A G - ReadM SNP 0041.scaffold00154 806222 1 T G - ReadM SNP 0041.scaffold00154 806563 1 C T - ReadM SNP 0041.scaffold00154 806571 1 C A - ScafM SNP 0041.scaffold00154 807309 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807324 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807356 1 G A scaffold6037 ScafM INDEL 0041.scaffold00154 807384 3 ... AAA scaffold6037 ScafM SNP 0041.scaffold00154 807386 1 T A scaffold6037 ScafM SNP 0041.scaffold00154 807391 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 807444 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807454 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807473 1 C T scaffold6037 ScafM INDEL 0041.scaffold00154 807515 2 .. GA scaffold6037 ScafM SNP 0041.scaffold00154 807725 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 807733 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807759 1 C G scaffold6037 ScafM SNP 0041.scaffold00154 807832 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807859 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807874 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807914 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 807918 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 807924 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807944 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807957 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807961 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807963 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 807965 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 807983 1 G A scaffold6037 ScafM SNP 0041.scaffold00154 808000 1 A G scaffold6037 ScafM SNP 0041.scaffold00154 808012 1 A G scaffold6037 ScafM SNP 0041.scaffold00154 808040 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 808051 1 T C scaffold6037 ScafM SNP 0041.scaffold00154 808130 1 C T scaffold6037 ScafM SNP 0041.scaffold00154 808166 1 A T scaffold6037 Both SNP 0041.scaffold00154 808207 1 C G scaffold6037 ReadM SNP 0041.scaffold00154 808229 1 T G - ReadM SNP 0041.scaffold00154 808251 1 G T - ReadM SNP 0041.scaffold00154 808481 1 A G - ReadM SNP 0041.scaffold00154 808553 1 C T - ReadM SNP 0041.scaffold00154 808579 1 A C - ReadM SNP 0041.scaffold00154 808642 1 T A - ReadM SNP 0041.scaffold00154 808701 1 C T - ReadM SNP 0041.scaffold00154 810548 1 A C - ReadM SNP 0041.scaffold00154 810607 1 T G - ScafM INDEL 0041.scaffold00154 810883 1 A . scaffold2443 ScafM SNP 0041.scaffold00154 810911 1 G A scaffold2443 ScafM INDEL 0041.scaffold00154 810957 1 T . scaffold2443 ScafM INDEL 0041.scaffold00154 810959 4 ATAA .... scaffold2443 ScafM INDEL 0041.scaffold00154 810966 2 TA .. scaffold2443 ScafM INDEL 0041.scaffold00154 810974 1 T . scaffold2443 ScafM INDEL 0041.scaffold00154 810997 1 C . scaffold2443 ScafM SNP 0041.scaffold00154 811006 1 T C scaffold2443 ScafM INDEL 0041.scaffold00154 811017 3 CCG ... scaffold2443 Both SNP 0041.scaffold00154 811130 1 T C scaffold2443 ScafM SNP 0041.scaffold00154 811149 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 811222 1 A G scaffold2443 ScafM SNP 0041.scaffold00154 811282 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 811490 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 811738 1 T C scaffold2443 ScafM SNP 0041.scaffold00154 811797 1 T C scaffold2443 ScafM SNP 0041.scaffold00154 811799 1 T A scaffold2443 ReadM SNP 0041.scaffold00154 813213 1 T C - ReadM SNP 0041.scaffold00154 813259 1 G T - ReadM SNP 0041.scaffold00154 813266 1 G T - ReadM SNP 0041.scaffold00154 813328 1 A T - ReadM SNP 0041.scaffold00154 813349 1 C T - ScafM SNP 0041.scaffold00154 813565 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 813636 1 A G scaffold2443 ScafM INDEL 0041.scaffold00154 813658 1 . C scaffold2443 ScafM SNP 0041.scaffold00154 813677 1 A G scaffold2443 ScafM SNP 0041.scaffold00154 813724 1 T G scaffold2443 ScafM SNP 0041.scaffold00154 813777 2 CT AA scaffold2443 ScafM SNP 0041.scaffold00154 813780 1 C A scaffold2443 ScafM SNP 0041.scaffold00154 813798 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 813805 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 813822 1 T C scaffold2443 ScafM INDEL 0041.scaffold00154 813825 1 . G scaffold2443 ReadM SNP 0041.scaffold00154 814288 1 C T - ReadM SNP 0041.scaffold00154 814318 1 C T - ReadM SNP 0041.scaffold00154 814337 1 C G - ReadM SNP 0041.scaffold00154 814425 1 A C - ReadM SNP 0041.scaffold00154 814526 1 G C - ReadM SNP 0041.scaffold00154 814556 1 A G - ReadM SNP 0041.scaffold00154 814603 1 A T - ReadM SNP 0041.scaffold00154 814625 1 C T - ReadM SNP 0041.scaffold00154 814701 1 A G - ReadM SNP 0041.scaffold00154 814704 1 T C - ReadM SNP 0041.scaffold00154 814736 1 T G - ReadM SNP 0041.scaffold00154 814812 1 T C - ReadM SNP 0041.scaffold00154 814835 1 G C - ReadM SNP 0041.scaffold00154 814874 1 T C - ScafM SNP 0041.scaffold00154 814915 1 C G scaffold2443 Both SNP 0041.scaffold00154 814986 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 815013 2 GC AG scaffold2443 Both SNP 0041.scaffold00154 815081 1 A G scaffold2443 Both SNP 0041.scaffold00154 815114 1 G A scaffold2443 Both SNP 0041.scaffold00154 815199 1 G A scaffold2443 Both SNP 0041.scaffold00154 815205 1 T A scaffold2443 Both SNP 0041.scaffold00154 815256 1 G A scaffold2443 Both SNP 0041.scaffold00154 815345 1 A G scaffold2443 Both SNP 0041.scaffold00154 815401 1 T C scaffold2443 Both SNP 0041.scaffold00154 815435 1 C T scaffold2443 Both SNP 0041.scaffold00154 815465 1 C T scaffold2443 Both SNP 0041.scaffold00154 815481 1 T A scaffold2443 Both SNP 0041.scaffold00154 815537 1 A C scaffold2443 Both SNP 0041.scaffold00154 815577 1 A G scaffold2443 ScafM SNP 0041.scaffold00154 815599 1 T C scaffold2443 ScafM SNP 0041.scaffold00154 815611 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 815659 2 CG AT scaffold2443 ScafM SNP 0041.scaffold00154 815697 1 T C scaffold2443 Both SNP 0041.scaffold00154 815744 1 G A scaffold2443 Both SNP 0041.scaffold00154 815782 1 T A scaffold2443 Both SNP 0041.scaffold00154 815819 1 T C scaffold2443 Both SNP 0041.scaffold00154 815837 1 A C scaffold2443 Both SNP 0041.scaffold00154 815880 1 G T scaffold2443 ScafM SNP 0041.scaffold00154 815905 1 A G scaffold2443 ScafM SNP 0041.scaffold00154 815911 1 C A scaffold2443 ScafM SNP 0041.scaffold00154 815924 1 T C scaffold2443 ScafM SNP 0041.scaffold00154 815926 1 C T scaffold2443 ScafM INDEL 0041.scaffold00154 815958 3 TTA ... scaffold2443 ScafM SNP 0041.scaffold00154 816044 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 816059 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 816067 2 CT AC scaffold2443 ScafM SNP 0041.scaffold00154 816075 1 T A scaffold2443 ScafM SNP 0041.scaffold00154 816077 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 816080 1 C T scaffold2443 Both SNP 0041.scaffold00154 816170 1 T A scaffold2443 ReadM SNP 0041.scaffold00154 816231 1 A G - ReadM SNP 0041.scaffold00154 816237 1 A G - ReadM SNP 0041.scaffold00154 816535 1 A T - ReadM SNP 0041.scaffold00154 816541 1 C T - ReadM SNP 0041.scaffold00154 816610 1 C T - ReadM SNP 0041.scaffold00154 816651 2 CA TG - ReadM SNP 0041.scaffold00154 817030 1 G A - ReadM SNP 0041.scaffold00154 817034 1 G A - ReadM SNP 0041.scaffold00154 817141 1 C A - ReadM SNP 0041.scaffold00154 817166 1 G C - ReadM SNP 0041.scaffold00154 817176 1 G A - ReadM SNP 0041.scaffold00154 817405 2 AT GC - ReadM SNP 0041.scaffold00154 817713 1 G T - ReadM SNP 0041.scaffold00154 817763 1 T C - ReadM SNP 0041.scaffold00154 817782 1 G A - ReadM SNP 0041.scaffold00154 817831 1 G T - ScafM SNP 0041.scaffold00154 817992 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 817999 1 A G scaffold2443 ScafM SNP 0041.scaffold00154 818001 2 TG CA scaffold2443 ScafM SNP 0041.scaffold00154 818006 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 818018 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 818020 1 G C scaffold2443 ScafM SNP 0041.scaffold00154 818042 1 C T scaffold2443 ScafM SNP 0041.scaffold00154 818044 1 G T scaffold2443 ReadM SNP 0041.scaffold00154 818191 1 A G - Both SNP 0041.scaffold00154 818233 1 A G scaffold2443 Both SNP 0041.scaffold00154 818309 1 C T scaffold2443 Both INDEL 0041.scaffold00154 818325 1 . T scaffold2443 Both SNP 0041.scaffold00154 818374 1 A G scaffold2443 Both SNP 0041.scaffold00154 818403 1 G C scaffold2443 Both SNP 0041.scaffold00154 818414 1 G A scaffold2443 ScafM SNP 0041.scaffold00154 818431 1 C A scaffold2443 ScafM INDEL 0041.scaffold00154 818446 1 A . scaffold2443 ScafM SNP 0041.scaffold00154 818455 2 CC AT scaffold2443 ReadM SNP 0041.scaffold00154 818612 1 C A - ReadM SNP 0041.scaffold00154 818630 1 T C - ReadM SNP 0041.scaffold00154 818730 1 T G - ReadM SNP 0041.scaffold00154 818739 1 C T - ReadM SNP 0041.scaffold00154 818805 1 G A - ReadM SNP 0041.scaffold00154 818880 1 T G - ReadM SNP 0041.scaffold00154 818884 1 G T - ReadM SNP 0041.scaffold00154 835019 1 A G - ReadM SNP 0041.scaffold00154 835064 1 C G - ReadM SNP 0041.scaffold00154 835076 1 A T - ReadM SNP 0041.scaffold00154 835112 1 G A - ReadM SNP 0041.scaffold00154 835146 1 G A - ReadM SNP 0041.scaffold00154 835172 1 G A - ReadM SNP 0041.scaffold00154 835503 1 T G - ReadM SNP 0041.scaffold00154 835535 1 T G - ReadM SNP 0041.scaffold00154 835599 1 G A - ReadM SNP 0041.scaffold00154 835602 1 G A - ReadM SNP 0041.scaffold00154 835691 1 G T - ReadM SNP 0041.scaffold00154 835885 1 G A - Both SNP 0041.scaffold00154 835973 1 A G scaffold19472 Both SNP 0041.scaffold00154 835976 1 T C scaffold19472 Both SNP 0041.scaffold00154 836022 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 836066 2 TT CC scaffold19472 Both SNP 0041.scaffold00154 836103 1 G A scaffold19472 Both SNP 0041.scaffold00154 836174 1 G T scaffold19472 Both SNP 0041.scaffold00154 836196 1 A T scaffold19472 Both SNP 0041.scaffold00154 836229 2 TG CA scaffold19472 Both INDEL 0041.scaffold00154 836277 2 TA .. scaffold19472 Both SNP 0041.scaffold00154 836316 1 T C scaffold19472 Both SNP 0041.scaffold00154 836339 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 836385 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 836394 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 836421 2 GG TA scaffold19472 Both SNP 0041.scaffold00154 836468 1 A G scaffold19472 Both SNP 0041.scaffold00154 836566 1 G A scaffold19472 Both SNP 0041.scaffold00154 836606 1 A G scaffold19472 Both SNP 0041.scaffold00154 836695 1 A G scaffold19472 Both SNP 0041.scaffold00154 836701 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 836746 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 836748 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 836774 12 ............ GGTGATGATATT scaffold19472 ScafM SNP 0041.scaffold00154 836777 1 C T scaffold19472 Both SNP 0041.scaffold00154 836782 1 C T scaffold19472 Both SNP 0041.scaffold00154 836830 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 836920 2 GT AC scaffold19472 Both SNP 0041.scaffold00154 836963 1 G A scaffold19472 Both SNP 0041.scaffold00154 836973 1 T C scaffold19472 Both SNP 0041.scaffold00154 836986 1 A T scaffold19472 Both SNP 0041.scaffold00154 837069 1 A G scaffold19472 Both SNP 0041.scaffold00154 837129 1 A G scaffold19472 Both SNP 0041.scaffold00154 837210 1 A C scaffold19472 Both SNP 0041.scaffold00154 837275 1 C T scaffold19472 Both SNP 0041.scaffold00154 837388 1 A T scaffold19472 Both SNP 0041.scaffold00154 837444 1 G T scaffold19472 Both SNP 0041.scaffold00154 837523 1 G T scaffold19472 Both SNP 0041.scaffold00154 837539 1 T C scaffold19472 Both INDEL 0041.scaffold00154 837550 1 . A scaffold19472 ScafM SNP 0041.scaffold00154 837601 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 837613 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 837635 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 837643 2 GT CC scaffold19472 ScafM SNP 0041.scaffold00154 837661 2 GA AG scaffold19472 Both SNP 0041.scaffold00154 837724 1 G A scaffold19472 Both SNP 0041.scaffold00154 837767 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 837775 2 CA TG scaffold19472 Both SNP 0041.scaffold00154 837867 1 G T scaffold19472 Both SNP 0041.scaffold00154 837897 1 T C scaffold19472 Both SNP 0041.scaffold00154 837984 1 A G scaffold19472 Both SNP 0041.scaffold00154 838041 1 C T scaffold19472 Both SNP 0041.scaffold00154 838081 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 838140 3 ... TTG scaffold19472 ScafM INDEL 0041.scaffold00154 838146 10 .......... TATCTGCATA scaffold19472 ScafM INDEL 0041.scaffold00154 838162 1 . T scaffold19472 ScafM SNP 0041.scaffold00154 838164 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 838171 1 C T scaffold19472 ScafM INDEL 0041.scaffold00154 838181 4 GGTC .... scaffold19472 ScafM INDEL 0041.scaffold00154 838186 1 G . scaffold19472 ScafM INDEL 0041.scaffold00154 838190 4 CGGG .... scaffold19472 ScafM SNP 0041.scaffold00154 838195 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 838218 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 838227 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 838242 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 838251 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 838257 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 838266 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 838277 2 CC TT scaffold19472 ScafM SNP 0041.scaffold00154 838280 1 A G scaffold19472 Both SNP 0041.scaffold00154 838372 1 G A scaffold19472 Both INDEL 0041.scaffold00154 838451 1 G . scaffold19472 Both SNP 0041.scaffold00154 838814 1 C T scaffold19472 Both SNP 0041.scaffold00154 838818 1 T C scaffold19472 Both SNP 0041.scaffold00154 838829 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 838867 1 G T scaffold19472 ScafM INDEL 0041.scaffold00154 838900 3 ... TTC scaffold19472 Both SNP 0041.scaffold00154 839000 1 A G scaffold19472 Both SNP 0041.scaffold00154 839061 1 T G scaffold19472 Both SNP 0041.scaffold00154 839207 1 T C scaffold19472 Both SNP 0041.scaffold00154 839383 1 A C scaffold19472 Both SNP 0041.scaffold00154 839557 1 C T scaffold19472 Both SNP 0041.scaffold00154 839584 1 G A scaffold19472 Both SNP 0041.scaffold00154 839761 1 G T scaffold19472 Both SNP 0041.scaffold00154 839839 1 T C scaffold19472 Both SNP 0041.scaffold00154 840423 1 G T scaffold19472 Both SNP 0041.scaffold00154 840628 1 C T scaffold19472 Both SNP 0041.scaffold00154 841020 1 C T scaffold19472 Both SNP 0041.scaffold00154 841057 1 G A scaffold19472 Both SNP 0041.scaffold00154 841071 1 T C scaffold19472 Both SNP 0041.scaffold00154 841357 1 G A scaffold19472 ReadM SNP 0041.scaffold00154 841505 1 G A - ReadM SNP 0041.scaffold00154 841514 1 C T - ReadM SNP 0041.scaffold00154 841548 1 T C - ReadM SNP 0041.scaffold00154 841588 1 C T - Both SNP 0041.scaffold00154 841680 1 T G scaffold19472 Both SNP 0041.scaffold00154 841852 1 G C scaffold19472 Both SNP 0041.scaffold00154 841985 1 G T scaffold19472 Both SNP 0041.scaffold00154 842532 1 C T scaffold19472 Both SNP 0041.scaffold00154 842572 1 T C scaffold19472 ScafM INDEL 0041.scaffold00154 842597 5 TTAAA ..... scaffold19472 ScafM SNP 0041.scaffold00154 842603 1 T C scaffold19472 Both SNP 0041.scaffold00154 843286 1 C G scaffold19472 Both INDEL 0041.scaffold00154 843508 2 TT .. scaffold19472 Both SNP 0041.scaffold00154 843683 1 T C scaffold19472 Both SNP 0041.scaffold00154 843776 1 C A scaffold19472 Both SNP 0041.scaffold00154 844097 1 T C scaffold19472 ReadM INDEL 0041.scaffold00154 844169 2 CT .. - Both INDEL 0041.scaffold00154 844172 3 CCT ... scaffold19472 Both SNP 0041.scaffold00154 844309 1 C T scaffold19472 Both SNP 0041.scaffold00154 844321 1 T A scaffold19472 Both SNP 0041.scaffold00154 844363 1 G A scaffold19472 Both SNP 0041.scaffold00154 844392 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 844435 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 844443 1 G T scaffold19472 ScafM INDEL 0041.scaffold00154 844447 10 TTGTTGGGTT .......... scaffold19472 ScafM SNP 0041.scaffold00154 844487 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 844497 1 A . scaffold19472 ScafM INDEL 0041.scaffold00154 844508 1 A . scaffold19472 Both SNP 0041.scaffold00154 844567 1 G A scaffold19472 ReadM SNP 0041.scaffold00154 844649 1 C T - ReadM SNP 0041.scaffold00154 844680 1 T C - ReadM SNP 0041.scaffold00154 844818 1 C T - ScafM SNP 0041.scaffold00154 844898 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 844908 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 844920 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 844931 1 C T scaffold19472 Both SNP 0041.scaffold00154 844975 1 G A scaffold19472 ReadM SNP 0041.scaffold00154 845033 1 C T - ReadM SNP 0041.scaffold00154 845354 1 T G - ReadM SNP 0041.scaffold00154 845359 1 T C - ReadM SNP 0041.scaffold00154 845567 1 A G - ScafM SNP 0041.scaffold00154 847685 1 G C scaffold19472 ScafM SNP 0041.scaffold00154 847691 1 T C scaffold19472 ScafM INDEL 0041.scaffold00154 847699 1 A . scaffold19472 ScafM SNP 0041.scaffold00154 847702 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 847824 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 847841 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 847935 1 G A scaffold19472 ReadM SNP 0041.scaffold00154 848074 1 G A - ReadM SNP 0041.scaffold00154 848105 1 T C - ReadM SNP 0041.scaffold00154 848160 1 C T - ReadM SNP 0041.scaffold00154 848236 1 G A - ReadM SNP 0041.scaffold00154 848240 1 A T - ReadM SNP 0041.scaffold00154 852182 1 T A - ScafM SNP 0041.scaffold00154 870807 1 A G scaffold19472 Both SNP 0041.scaffold00154 871246 1 G A scaffold19472 Both SNP 0041.scaffold00154 871292 1 T A scaffold19472 Both SNP 0041.scaffold00154 871322 1 C T scaffold19472 Both SNP 0041.scaffold00154 871393 1 G A scaffold19472 Both SNP 0041.scaffold00154 871482 1 G A scaffold19472 ReadM SNP 0041.scaffold00154 871575 1 G T - ReadM SNP 0041.scaffold00154 871620 1 A T - ReadM SNP 0041.scaffold00154 871795 1 C T - Both SNP 0041.scaffold00154 871937 1 T C scaffold19472 Both SNP 0041.scaffold00154 871985 1 T C scaffold19472 ReadM SNP 0041.scaffold00154 872022 1 G A - ReadM SNP 0041.scaffold00154 872116 1 G C - ReadM SNP 0041.scaffold00154 872169 1 C G - ReadM SNP 0041.scaffold00154 872219 1 T C - ReadM SNP 0041.scaffold00154 872238 1 G A - ReadM SNP 0041.scaffold00154 872358 1 A G - ReadM SNP 0041.scaffold00154 872388 1 C T - ReadM SNP 0041.scaffold00154 872418 1 T C - ReadM SNP 0041.scaffold00154 872457 1 A G - ReadM SNP 0041.scaffold00154 872483 1 A G - ReadM SNP 0041.scaffold00154 872519 1 A T - ReadM SNP 0041.scaffold00154 872568 1 T C - ReadM SNP 0041.scaffold00154 872613 1 T G - Both SNP 0041.scaffold00154 872661 1 G T scaffold19472 Both SNP 0041.scaffold00154 872717 1 C T scaffold19472 Both SNP 0041.scaffold00154 872748 1 T C scaffold19472 Both SNP 0041.scaffold00154 872769 1 T G scaffold19472 Both SNP 0041.scaffold00154 872812 1 G A scaffold19472 Both SNP 0041.scaffold00154 872904 1 C T scaffold19472 ReadM SNP 0041.scaffold00154 872931 1 T C - ReadM SNP 0041.scaffold00154 872940 1 T C - ReadM SNP 0041.scaffold00154 873042 1 T C - ReadM SNP 0041.scaffold00154 873064 1 A G - ReadM SNP 0041.scaffold00154 873079 1 G A - ScafM SNP 0041.scaffold00154 873207 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 873220 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 873313 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 873388 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 873398 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 873406 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 875483 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 875539 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 875612 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 875649 1 C . scaffold19472 ScafM INDEL 0041.scaffold00154 875689 1 . T scaffold19472 ScafM SNP 0041.scaffold00154 875731 2 TA AG scaffold19472 Both SNP 0041.scaffold00154 875818 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 875848 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 875860 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 877869 2 AG CA scaffold19472 ScafM SNP 0041.scaffold00154 877908 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 877911 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 877946 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 877956 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 877979 2 AA GG scaffold19472 ScafM SNP 0041.scaffold00154 877992 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 879483 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 879497 2 AA CG scaffold19472 ScafM SNP 0041.scaffold00154 879529 1 G T scaffold19472 ReadM SNP 0041.scaffold00154 879754 1 C G - ReadM SNP 0041.scaffold00154 879816 1 A T - Both INDEL 0041.scaffold00154 880161 1 T . scaffold19472 Both SNP 0041.scaffold00154 880246 1 G C scaffold19472 ReadM INDEL 0041.scaffold00154 880351 1 . G - ReadM SNP 0041.scaffold00154 880434 1 A G - ReadM SNP 0041.scaffold00154 880476 1 A C - ReadM SNP 0041.scaffold00154 880519 1 A G - ReadM SNP 0041.scaffold00154 880608 1 C A - ReadM SNP 0041.scaffold00154 880625 1 C T - Both SNP 0041.scaffold00154 880660 1 A G scaffold19472 ReadM SNP 0041.scaffold00154 880767 1 A G - ReadM SNP 0041.scaffold00154 880824 1 G A - ReadM SNP 0041.scaffold00154 880853 1 A G - ReadM SNP 0041.scaffold00154 880867 1 C A - Both SNP 0041.scaffold00154 880944 1 C T scaffold19472 Both SNP 0041.scaffold00154 880999 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 881035 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 881039 1 C T scaffold19472 ReadM SNP 0041.scaffold00154 881153 1 A G - ReadM SNP 0041.scaffold00154 881202 1 C T - ReadM SNP 0041.scaffold00154 881241 1 T G - Both SNP 0041.scaffold00154 881291 1 T C scaffold19472 Both SNP 0041.scaffold00154 881319 1 C T scaffold19472 Both SNP 0041.scaffold00154 881406 1 A G scaffold19472 Both SNP 0041.scaffold00154 881514 1 C T scaffold19472 Both SNP 0041.scaffold00154 881553 1 C T scaffold19472 ReadM SNP 0041.scaffold00154 881595 1 A G - ReadM SNP 0041.scaffold00154 881651 1 A T - ReadM SNP 0041.scaffold00154 881730 1 C T - ReadM SNP 0041.scaffold00154 881754 1 C T - ReadM SNP 0041.scaffold00154 881779 1 C T - ReadM SNP 0041.scaffold00154 881818 1 C T - ReadM SNP 0041.scaffold00154 881970 1 T C - ReadM SNP 0041.scaffold00154 881974 1 C T - ReadM SNP 0041.scaffold00154 882087 1 T A - ScafM SNP 0041.scaffold00154 882528 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 882547 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 882587 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 882608 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 882656 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 882658 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 882684 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 882692 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 882714 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 882716 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 882771 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 882800 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 882873 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 883008 2 CG TT scaffold19472 Both SNP 0041.scaffold00154 883157 1 C T scaffold19472 Both SNP 0041.scaffold00154 883167 1 T C scaffold19472 Both SNP 0041.scaffold00154 883195 1 A G scaffold19472 Both SNP 0041.scaffold00154 883269 1 C T scaffold19472 Both INDEL 0041.scaffold00154 883386 3 GAT ... scaffold19472 ScafM SNP 0041.scaffold00154 883467 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 883486 2 .. AG scaffold19472 ScafM INDEL 0041.scaffold00154 883487 2 .C AA scaffold19472 ScafM SNP 0041.scaffold00154 883512 1 T C scaffold19472 ReadM SNP 0041.scaffold00154 883587 1 A G - ReadM SNP 0041.scaffold00154 883589 1 A G - ReadM SNP 0041.scaffold00154 883611 1 G T - Both SNP 0041.scaffold00154 883752 1 G A scaffold19472 Both INDEL 0041.scaffold00154 883821 1 . A scaffold19472 ScafM SNP 0041.scaffold00154 883945 2 TT GC scaffold19472 ReadM SNP 0041.scaffold00154 883946 1 T C - Both SNP 0041.scaffold00154 883972 1 G A scaffold19472 Both INDEL 0041.scaffold00154 884032 1 . A scaffold19472 Both SNP 0041.scaffold00154 884130 1 T C scaffold19472 Both SNP 0041.scaffold00154 884143 1 A G scaffold19472 Both SNP 0041.scaffold00154 884302 1 C T scaffold19472 Both SNP 0041.scaffold00154 884323 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 884357 1 C G scaffold19472 ScafM SNP 0041.scaffold00154 884684 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 884690 1 A C scaffold19472 ScafM INDEL 0041.scaffold00154 896894 4 .... TTCT scaffold19472 ScafM INDEL 0041.scaffold00154 896896 4 .... CATA scaffold19472 ScafM SNP 0041.scaffold00154 897003 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 897039 1 A C scaffold19472 ScafM INDEL 0041.scaffold00154 897063 1 . T scaffold19472 ScafM SNP 0041.scaffold00154 897080 1 T C scaffold19472 Both SNP 0041.scaffold00154 897159 1 A G scaffold19472 Both SNP 0041.scaffold00154 897181 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 897223 3 TTA ... scaffold19472 ScafM INDEL 0041.scaffold00154 897229 1 . G scaffold19472 ReadM SNP 0041.scaffold00154 897782 1 T C - ReadM SNP 0041.scaffold00154 897817 1 A G - ReadM SNP 0041.scaffold00154 897836 1 G C - ReadM SNP 0041.scaffold00154 897885 1 T C - ReadM SNP 0041.scaffold00154 897902 1 A G - ReadM SNP 0041.scaffold00154 897915 1 T A - ReadM SNP 0041.scaffold00154 898309 1 C T - ReadM SNP 0041.scaffold00154 898318 1 C G - ReadM SNP 0041.scaffold00154 899493 1 G A - ReadM SNP 0041.scaffold00154 899498 1 C A - ReadM SNP 0041.scaffold00154 899536 1 G A - ReadM SNP 0041.scaffold00154 899540 1 T C - ScafM SNP 0041.scaffold00154 900178 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 900221 1 G T scaffold19472 ScafM SNP 0041.scaffold00154 900277 1 G T scaffold19472 ScafM SNP 0041.scaffold00154 901103 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 901119 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 901188 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 901198 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 901245 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 901260 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 901272 1 G C scaffold19472 ScafM SNP 0041.scaffold00154 901316 1 T G scaffold19472 ReadM SNP 0041.scaffold00154 901725 1 G A - ReadM SNP 0041.scaffold00154 901773 1 T G - ReadM SNP 0041.scaffold00154 901833 1 T G - ReadM SNP 0041.scaffold00154 901836 1 T C - ReadM SNP 0041.scaffold00154 902121 1 G C - ReadM SNP 0041.scaffold00154 902217 1 G C - ReadM SNP 0041.scaffold00154 902225 1 T A - ScafM SNP 0041.scaffold00154 934169 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934195 1 G A scaffold16014 ScafM SNP 0041.scaffold00154 934197 2 GA AT scaffold16014 ScafM INDEL 0041.scaffold00154 934216 3 ..T CGC scaffold16014 ScafM SNP 0041.scaffold00154 934222 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934229 1 T G scaffold16014 ScafM SNP 0041.scaffold00154 934239 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934241 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934246 1 G A scaffold16014 ScafM SNP 0041.scaffold00154 934251 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934257 1 C A scaffold16014 ScafM SNP 0041.scaffold00154 934287 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934314 1 A T scaffold16014 ScafM SNP 0041.scaffold00154 934324 1 T G scaffold16014 ScafM SNP 0041.scaffold00154 934334 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934341 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934347 1 A G scaffold16014 ScafM INDEL 0041.scaffold00154 934349 3 ... CAA scaffold16014 ScafM SNP 0041.scaffold00154 934357 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934361 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934364 2 CT TC scaffold16014 ScafM SNP 0041.scaffold00154 934368 1 T A scaffold16014 ScafM SNP 0041.scaffold00154 934378 1 A G scaffold16014 ScafM INDEL 0041.scaffold00154 934380 3 AAA ... scaffold16014 ScafM SNP 0041.scaffold00154 934384 1 A C scaffold16014 ScafM SNP 0041.scaffold00154 934393 1 G A scaffold16014 ScafM SNP 0041.scaffold00154 934398 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934403 1 C A scaffold16014 ScafM SNP 0041.scaffold00154 934421 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934425 1 T G scaffold16014 ScafM SNP 0041.scaffold00154 934428 1 T A scaffold16014 ScafM SNP 0041.scaffold00154 934431 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934433 2 TG CA scaffold16014 ScafM SNP 0041.scaffold00154 934443 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934448 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934450 2 GT AC scaffold16014 ScafM SNP 0041.scaffold00154 934456 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934464 1 T C scaffold16014 ScafM SNP 0041.scaffold00154 934470 1 G A scaffold16014 ScafM SNP 0041.scaffold00154 934474 1 C T scaffold16014 ScafM SNP 0041.scaffold00154 934485 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934491 1 A G scaffold16014 ScafM SNP 0041.scaffold00154 934494 1 G C scaffold16014 ScafM SNP 0041.scaffold00154 934498 2 CA AG scaffold16014 ScafM SNP 0041.scaffold00154 934506 1 A C scaffold16014 ScafM SNP 0041.scaffold00154 934512 1 C T scaffold16014 ScafM INDEL 0041.scaffold00154 934524 2 GG .A scaffold16014 ScafM SNP 0041.scaffold00154 934527 1 A T scaffold16014 ScafM INDEL 0041.scaffold00154 934959 16 CCTATACTCAAAATGA ................ scaffold19472 ScafM SNP 0041.scaffold00154 935011 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 935022 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 935164 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 935183 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 935188 1 A T scaffold19472 ScafM INDEL 0041.scaffold00154 935198 3 TGA ... scaffold19472 ScafM SNP 0041.scaffold00154 935244 1 C G scaffold19472 ScafM SNP 0041.scaffold00154 935259 1 C T scaffold19472 ScafM INDEL 0041.scaffold00154 935269 1 . C scaffold19472 ScafM SNP 0041.scaffold00154 935349 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 935352 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 935547 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 935572 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 935980 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 936017 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 936021 1 T A scaffold19472 ScafM INDEL 0041.scaffold00154 936163 1 G . scaffold19472 ScafM INDEL 0041.scaffold00154 936165 1 . C scaffold19472 ScafM SNP 0041.scaffold00154 936190 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 936235 1 G A scaffold19472 Both SNP 0041.scaffold00154 936399 1 T G scaffold19472 Both SNP 0041.scaffold00154 936421 1 T G scaffold19472 Both SNP 0041.scaffold00154 936518 1 G A scaffold19472 Both SNP 0041.scaffold00154 936581 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 936606 3 AAG ... scaffold19472 Both SNP 0041.scaffold00154 936629 1 C T scaffold19472 Both SNP 0041.scaffold00154 936681 1 C T scaffold19472 Both SNP 0041.scaffold00154 936725 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 936759 5 CCTTA ..... scaffold19472 ScafM INDEL 0041.scaffold00154 936798 3 AAA ..G scaffold19472 Both SNP 0041.scaffold00154 937019 1 C G scaffold19472 Both SNP 0041.scaffold00154 937085 1 G T scaffold19472 Both SNP 0041.scaffold00154 937155 1 T C scaffold19472 Both SNP 0041.scaffold00154 937228 1 G A scaffold19472 Both SNP 0041.scaffold00154 937249 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 937278 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 937328 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 937330 1 T . scaffold19472 ScafM SNP 0041.scaffold00154 937352 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 937354 1 T G scaffold19472 ScafM SNP 0041.scaffold00154 937361 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 937367 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 937388 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 937421 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 937427 2 TA GT scaffold19472 ScafM SNP 0041.scaffold00154 937729 3 CAA ACC scaffold19472 ScafM SNP 0041.scaffold00154 937764 1 T C scaffold19472 ScafM INDEL 0041.scaffold00154 937771 2 .. AT scaffold19472 ScafM SNP 0041.scaffold00154 937794 2 CC TA scaffold19472 ScafM SNP 0041.scaffold00154 938006 1 G C scaffold19472 ScafM INDEL 0041.scaffold00154 938030 8 ........ AACTAACC scaffold19472 ScafM SNP 0041.scaffold00154 938032 1 G C scaffold19472 Both SNP 0041.scaffold00154 938074 1 T C scaffold19472 Both SNP 0041.scaffold00154 938193 1 A G scaffold19472 Both SNP 0041.scaffold00154 938251 1 C G scaffold19472 ScafM SNP 0041.scaffold00154 938302 2 AG TC scaffold19472 Both SNP 0041.scaffold00154 938308 1 G T scaffold19472 Both SNP 0041.scaffold00154 938573 1 C T scaffold19472 Both SNP 0041.scaffold00154 938769 1 G C scaffold19472 ScafM SNP 0041.scaffold00154 938820 1 A T scaffold19472 ScafM INDEL 0041.scaffold00154 938871 1 A . scaffold19472 ScafM SNP 0041.scaffold00154 938875 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 938903 1 C A scaffold19472 ScafM INDEL 0041.scaffold00154 938918 5 TGGGA ..... scaffold19472 ScafM SNP 0041.scaffold00154 939049 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 939060 2 GA .. scaffold19472 ScafM SNP 0041.scaffold00154 939087 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 939106 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 939110 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 939123 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 939164 1 T G scaffold19472 Both SNP 0041.scaffold00154 939230 1 A T scaffold19472 Both SNP 0041.scaffold00154 939239 1 T C scaffold19472 Both SNP 0041.scaffold00154 939295 1 G T scaffold19472 Both SNP 0041.scaffold00154 939380 1 C A scaffold19472 Both SNP 0041.scaffold00154 939536 1 G T scaffold19472 Both SNP 0041.scaffold00154 939568 1 G A scaffold19472 Both SNP 0041.scaffold00154 939606 1 C A scaffold19472 Both SNP 0041.scaffold00154 939624 1 G A scaffold19472 Both SNP 0041.scaffold00154 939696 1 G C scaffold19472 ScafM SNP 0041.scaffold00154 939915 1 G C scaffold19472 Both SNP 0041.scaffold00154 939926 1 A C scaffold19472 Both SNP 0041.scaffold00154 939948 1 A G scaffold19472 Both SNP 0041.scaffold00154 939964 1 T G scaffold19472 Both SNP 0041.scaffold00154 940048 1 G C scaffold19472 Both SNP 0041.scaffold00154 940089 1 A G scaffold19472 Both SNP 0041.scaffold00154 940175 1 G T scaffold19472 Both SNP 0041.scaffold00154 940200 1 G A scaffold19472 Both SNP 0041.scaffold00154 940227 1 A T scaffold19472 Both INDEL 0041.scaffold00154 940404 1 . A scaffold19472 ScafM SNP 0041.scaffold00154 940412 1 T A scaffold19472 ReadM INDEL 0041.scaffold00154 940636 1 . A - ReadM INDEL 0041.scaffold00154 940724 1 . A - ReadM SNP 0041.scaffold00154 940888 1 T C - ReadM SNP 0041.scaffold00154 940924 1 C T - ReadM SNP 0041.scaffold00154 940935 1 T A - ReadM SNP 0041.scaffold00154 941069 1 T A - ReadM SNP 0041.scaffold00154 941119 1 A T - ReadM SNP 0041.scaffold00154 941129 1 C T - ReadM SNP 0041.scaffold00154 941158 1 T C - ReadM SNP 0041.scaffold00154 941298 1 C T - ReadM SNP 0041.scaffold00154 941524 1 G A - ReadM INDEL 0041.scaffold00154 941530 1 . A - ReadM SNP 0041.scaffold00154 941667 1 C A - ReadM SNP 0041.scaffold00154 941684 1 G A - ReadM SNP 0041.scaffold00154 941749 1 T A - ReadM INDEL 0041.scaffold00154 941755 1 . T - ReadM SNP 0041.scaffold00154 941800 1 T C - ReadM SNP 0041.scaffold00154 941875 1 G C - ReadM SNP 0041.scaffold00154 942070 1 C T - ReadM SNP 0041.scaffold00154 942168 1 T C - ScafM SNP 0041.scaffold00154 944384 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 944428 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 944473 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 944475 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 944482 1 A G scaffold19472 ScafM SNP 0041.scaffold00154 944549 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 944570 1 A G scaffold19472 ScafM INDEL 0041.scaffold00154 944617 3 CAA ... scaffold19472 ScafM SNP 0041.scaffold00154 944627 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 944682 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 944701 1 . C scaffold19472 ScafM SNP 0041.scaffold00154 944729 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 944750 1 A C scaffold19472 ScafM SNP 0041.scaffold00154 944777 1 G C scaffold19472 ScafM SNP 0041.scaffold00154 944857 1 A T scaffold19472 ScafM SNP 0041.scaffold00154 944860 1 G A scaffold19472 ScafM SNP 0041.scaffold00154 944864 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 944917 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 944920 1 C A scaffold19472 ScafM SNP 0041.scaffold00154 944923 1 C G scaffold19472 Both SNP 0041.scaffold00154 944962 1 G A scaffold19472 ScafM INDEL 0041.scaffold00154 945069 1 G . scaffold19472 ScafM SNP 0041.scaffold00154 945077 1 C T scaffold19472 ScafM SNP 0041.scaffold00154 945105 1 T C scaffold19472 ScafM SNP 0041.scaffold00154 945110 1 T A scaffold19472 ScafM SNP 0041.scaffold00154 945122 1 C T scaffold19472 ScafM INDEL 0041.scaffold00154 945160 1 . G scaffold19472 ScafM SNP 0041.scaffold00154 945200 1 T A scaffold19472 ReadM SNP 0041.scaffold00154 945599 1 C T - ReadM SNP 0041.scaffold00154 945645 1 G A - ScafM SNP 0041.scaffold00154 949197 1 A G scaffold59373 ScafM SNP 0041.scaffold00154 949303 1 C A scaffold59373 ScafM SNP 0041.scaffold00154 949349 1 T C scaffold59373 ScafM SNP 0041.scaffold00154 949425 1 G T scaffold59373 ScafM SNP 0041.scaffold00154 949427 1 T A scaffold59373 ScafM INDEL 0041.scaffold00154 949450 9 ATGAAAAAC ......... scaffold59373 ScafM SNP 0041.scaffold00154 949478 1 T G scaffold59373 ScafM SNP 0041.scaffold00154 949481 1 C T scaffold59373 ScafM SNP 0041.scaffold00154 949538 1 G A scaffold59373 ScafM SNP 0041.scaffold00154 949543 1 C A scaffold59373 ScafM SNP 0041.scaffold00154 957296 1 T C scaffold52191 ScafM SNP 0041.scaffold00154 957348 1 T A scaffold52191 ScafM SNP 0041.scaffold00154 957357 1 C T scaffold52191 ScafM SNP 0041.scaffold00154 957384 1 T C scaffold52191 ScafM SNP 0041.scaffold00154 957433 1 T C scaffold52191 ScafM SNP 0041.scaffold00154 957490 1 A G scaffold52191 ScafM INDEL 0041.scaffold00154 957523 1 T . scaffold52191 ScafM INDEL 0041.scaffold00154 957610 1 . C scaffold52191 ScafM SNP 0041.scaffold00154 958479 1 A G scaffold52191 ScafM SNP 0041.scaffold00154 958489 1 A G scaffold52191 ScafM SNP 0041.scaffold00154 958498 1 G A scaffold52191 Both SNP 0041.scaffold00154 958698 1 G A scaffold52191 Both SNP 0041.scaffold00154 959049 1 G A scaffold52191 Both SNP 0041.scaffold00154 959377 1 G A scaffold52191 Both SNP 0041.scaffold00154 959457 1 C T scaffold52191 Both SNP 0041.scaffold00154 959662 1 C T scaffold52191 ScafM SNP 0041.scaffold00154 960555 1 T A scaffold28830 ScafM INDEL 0041.scaffold00154 990910 1 . T scaffold34467 ReadM SNP 0041.scaffold00154 991302 1 C T - ReadM SNP 0041.scaffold00154 991363 1 C T - ReadM SNP 0041.scaffold00154 991613 1 G A - ReadM SNP 0041.scaffold00154 991756 1 G C - ReadM SNP 0041.scaffold00154 991760 1 T C - ReadM SNP 0041.scaffold00154 991813 1 A C - ReadM SNP 0041.scaffold00154 991872 1 C A - Both INDEL 0041.scaffold00154 992129 1 A . scaffold19486 Both SNP 0041.scaffold00154 992297 1 C A scaffold19486 Both SNP 0041.scaffold00154 992316 1 C A scaffold19486 Both SNP 0041.scaffold00154 992388 1 A G scaffold19486 Both SNP 0041.scaffold00154 992451 1 G A scaffold19486 Both SNP 0041.scaffold00154 992476 1 G A scaffold19486 Both SNP 0041.scaffold00154 992485 1 A T scaffold19486 Both SNP 0041.scaffold00154 992553 1 A T scaffold19486 ScafM SNP 0041.scaffold00154 992575 2 GC AT scaffold19486 ScafM SNP 0041.scaffold00154 992578 1 A T scaffold19486 Both SNP 0041.scaffold00154 992648 1 C T scaffold19486 Both SNP 0041.scaffold00154 992654 1 T A scaffold19486 ReadM SNP 0041.scaffold00154 993150 1 A G - ReadM SNP 0041.scaffold00154 993199 1 C T - ReadM SNP 0041.scaffold00154 993306 1 G A - Both INDEL 0041.scaffold00154 993327 1 A . scaffold19486 ScafM SNP 0041.scaffold00154 993674 1 T C scaffold19486 ReadM SNP 0041.scaffold00154 994006 1 C T - ReadM SNP 0041.scaffold00154 994612 1 T C - ReadM SNP 0041.scaffold00154 994669 1 A C - Both SNP 0041.scaffold00154 994725 1 C G scaffold19486 Both SNP 0041.scaffold00154 994766 1 A C scaffold19486 Both INDEL 0041.scaffold00154 994833 1 G . scaffold19486 Both SNP 0041.scaffold00154 994887 1 A T scaffold19486 Both SNP 0041.scaffold00154 994916 1 G A scaffold19486 ReadM SNP 0041.scaffold00154 994974 1 C T - ReadM INDEL 0041.scaffold00154 995112 2 TG .. - ReadM SNP 0041.scaffold00154 995119 1 C T - ReadM SNP 0041.scaffold00154 995622 1 G A - ReadM INDEL 0041.scaffold00154 995636 1 . A - ReadM SNP 0041.scaffold00154 995847 1 C T - ReadM INDEL 0041.scaffold00154 995895 1 . T - ReadM INDEL 0041.scaffold00154 995927 1 T . - ReadM INDEL 0041.scaffold00154 996347 1 T . - ReadM SNP 0041.scaffold00154 996388 1 T C - ReadM SNP 0041.scaffold00154 996484 1 G T - ScafM SNP 0041.scaffold00154 997032 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 997064 1 T C scaffold19486 Both SNP 0041.scaffold00154 997668 1 C T scaffold19486 Both SNP 0041.scaffold00154 997749 1 G A scaffold19486 Both SNP 0041.scaffold00154 997803 1 T G scaffold19486 ScafM INDEL 0041.scaffold00154 997900 9 ......... GTCAGGCAA scaffold19486 ScafM SNP 0041.scaffold00154 997910 1 A G scaffold19486 Both SNP 0041.scaffold00154 997960 1 G T scaffold19486 Both SNP 0041.scaffold00154 997983 1 T C scaffold19486 Both SNP 0041.scaffold00154 998008 1 A T scaffold19486 ScafM INDEL 0041.scaffold00154 998071 3 ... TTT scaffold19486 Both SNP 0041.scaffold00154 998300 1 G C scaffold19486 ReadM SNP 0041.scaffold00154 998342 1 C A - ReadM SNP 0041.scaffold00154 998434 1 A G - ReadM SNP 0041.scaffold00154 998481 1 A G - ReadM SNP 0041.scaffold00154 998678 1 A G - ReadM SNP 0041.scaffold00154 998794 1 G C - Both SNP 0041.scaffold00154 998975 1 G A scaffold19486 Both SNP 0041.scaffold00154 999109 1 C A scaffold19486 ScafM SNP 0041.scaffold00154 999255 1 T C scaffold19486 ScafM SNP 0041.scaffold00154 999267 1 C A scaffold19486 ScafM SNP 0041.scaffold00154 999271 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 999274 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 999286 1 G C scaffold19486 ScafM SNP 0041.scaffold00154 999293 1 A G scaffold19486 ScafM INDEL 0041.scaffold00154 999365 1 A . scaffold19486 ScafM SNP 0041.scaffold00154 999989 1 G A scaffold19486 ScafM INDEL 0041.scaffold00154 1000040 3 ... AAA scaffold19486 ScafM SNP 0041.scaffold00154 1000109 1 A T scaffold19486 Both SNP 0041.scaffold00154 1000489 1 C G scaffold19486 Both SNP 0041.scaffold00154 1000544 1 T A scaffold19486 Both SNP 0041.scaffold00154 1000608 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1000619 1 G A scaffold19486 ScafM INDEL 0041.scaffold00154 1000646 3 CGG ... scaffold19486 ScafM INDEL 0041.scaffold00154 1000650 2 AC .. scaffold19486 ScafM SNP 0041.scaffold00154 1000653 1 G C scaffold19486 ScafM SNP 0041.scaffold00154 1000677 1 T C scaffold19486 ScafM SNP 0041.scaffold00154 1000680 1 C A scaffold19486 ScafM SNP 0041.scaffold00154 1000687 1 A T scaffold19486 ScafM SNP 0041.scaffold00154 1000691 1 T C scaffold19486 ScafM INDEL 0041.scaffold00154 1000693 1 . C scaffold19486 ScafM INDEL 0041.scaffold00154 1000694 2 .A CC scaffold19486 ScafM INDEL 0041.scaffold00154 1000697 2 .T CC scaffold19486 ScafM SNP 0041.scaffold00154 1000702 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 1000704 2 CG AT scaffold19486 ScafM INDEL 0041.scaffold00154 1000707 3 ... AGT scaffold19486 ScafM SNP 0041.scaffold00154 1000709 3 AAA TCT scaffold19486 ScafM SNP 0041.scaffold00154 1000713 1 A T scaffold19486 ScafM INDEL 0041.scaffold00154 1000715 1 . C scaffold19486 ScafM SNP 0041.scaffold00154 1000719 3 AAC TTT scaffold19486 ScafM SNP 0041.scaffold00154 1000723 1 T G scaffold19486 ScafM SNP 0041.scaffold00154 1000725 2 TT GG scaffold19486 ScafM SNP 0041.scaffold00154 1000730 3 CCT AAA scaffold19486 ScafM INDEL 0041.scaffold00154 1000734 1 A . scaffold19486 ScafM SNP 0041.scaffold00154 1000741 2 TA AT scaffold19486 ScafM SNP 0041.scaffold00154 1000747 1 C T scaffold19486 ScafM INDEL 0041.scaffold00154 1000749 3 CCA ... scaffold19486 ScafM INDEL 0041.scaffold00154 1000755 1 C . scaffold19486 ScafM SNP 0041.scaffold00154 1000801 1 G C scaffold19486 ScafM SNP 0041.scaffold00154 1000828 1 A T scaffold19486 ScafM SNP 0041.scaffold00154 1000842 1 T G scaffold19486 ScafM SNP 0041.scaffold00154 1000852 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 1000941 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1000996 1 G T scaffold19486 ScafM SNP 0041.scaffold00154 1001056 2 GA AG scaffold19486 ScafM SNP 0041.scaffold00154 1008227 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 1008272 1 T G scaffold19486 ScafM SNP 0041.scaffold00154 1008282 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 1008321 1 G A scaffold19486 ScafM INDEL 0041.scaffold00154 1008354 2 GT .. scaffold19486 ScafM INDEL 0041.scaffold00154 1008360 1 C . scaffold19486 ScafM SNP 0041.scaffold00154 1008405 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 1008414 1 T G scaffold19486 ScafM INDEL 0041.scaffold00154 1008422 3 TTT ..A scaffold19486 ScafM SNP 0041.scaffold00154 1008496 1 G T scaffold19486 ScafM SNP 0041.scaffold00154 1009277 1 C T scaffold19486 ScafM INDEL 0041.scaffold00154 1009356 17 ................. ATCATTTTACTCTCTCG scaffold19486 ScafM INDEL 0041.scaffold00154 1009357 1 . C scaffold19486 ScafM SNP 0041.scaffold00154 1009388 1 C A scaffold19486 ScafM SNP 0041.scaffold00154 1009404 1 G A scaffold19486 Both SNP 0041.scaffold00154 1009427 1 T C scaffold19486 Both INDEL 0041.scaffold00154 1009462 1 . A scaffold19486 Both SNP 0041.scaffold00154 1009471 1 T C scaffold19486 Both SNP 0041.scaffold00154 1009544 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 1009603 1 A T scaffold19486 ScafM SNP 0041.scaffold00154 1009617 1 T G scaffold19486 ScafM SNP 0041.scaffold00154 1009624 1 T G scaffold19486 ScafM SNP 0041.scaffold00154 1009632 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 1009657 1 G A scaffold19486 ScafM INDEL 0041.scaffold00154 1009675 3 ... GTA scaffold19486 ScafM SNP 0041.scaffold00154 1009694 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1009710 1 C T scaffold19486 ScafM INDEL 0041.scaffold00154 1009713 3 ... ACT scaffold19486 ScafM SNP 0041.scaffold00154 1009716 2 CC TG scaffold19486 ScafM SNP 0041.scaffold00154 1009766 1 T C scaffold19486 ScafM SNP 0041.scaffold00154 1009772 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1009782 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1009788 1 A T scaffold19486 ScafM SNP 0041.scaffold00154 1009808 1 C T scaffold19486 ScafM INDEL 0041.scaffold00154 1009823 1 T . scaffold19486 ScafM SNP 0041.scaffold00154 1009841 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 1009843 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1009865 1 A G scaffold19486 ScafM SNP 0041.scaffold00154 1009871 1 G A scaffold19486 ScafM SNP 0041.scaffold00154 1010045 1 C G scaffold19486 ScafM SNP 0041.scaffold00154 1010536 1 T G scaffold19486 ScafM INDEL 0041.scaffold00154 1010553 7 TCGAGAG ....... scaffold19486 ScafM INDEL 0041.scaffold00154 1010710 28 TTTCATCACCTGCTCGCTCCAATTCTTC ............................ scaffold19486 ScafM INDEL 0041.scaffold00154 1010741 8 TTAGTGAT ........ scaffold19486 ScafM INDEL 0041.scaffold00154 1010751 11 TTAGAGTTTGT ........... scaffold19486 ScafM INDEL 0041.scaffold00154 1010765 3 CCC ... scaffold19486 ScafM INDEL 0041.scaffold00154 1010769 2 TT .. scaffold19486 ScafM INDEL 0041.scaffold00154 1010772 8 TTTGCTCG ........ scaffold19486 ScafM INDEL 0041.scaffold00154 1010782 2 CT .. scaffold19486 ScafM INDEL 0041.scaffold00154 1010786 4 AAAG .... scaffold19486 ScafM INDEL 0041.scaffold00154 1010791 2 GT .. scaffold19486 ScafM INDEL 0041.scaffold00154 1010794 5 ACACA ..... scaffold19486 ScafM INDEL 0041.scaffold00154 1010802 17 ACCAAAAATAATCTAGA ................. scaffold19486 Both SNP 0041.scaffold00154 1010848 1 C T scaffold19486 ScafM SNP 0041.scaffold00154 1010923 1 C A scaffold19486 Both SNP 0041.scaffold00154 1011004 1 G A scaffold19486 Both SNP 0041.scaffold00154 1011031 1 C G scaffold19486 Both SNP 0041.scaffold00154 1011037 1 C T scaffold19486 Both SNP 0041.scaffold00154 1011153 1 C T scaffold19486 Both INDEL 0041.scaffold00154 1011177 1 . G scaffold19486 ReadM SNP 0041.scaffold00154 1011276 1 A G - ReadM SNP 0041.scaffold00154 1011318 1 C T - ReadM SNP 0041.scaffold00154 1011356 1 C T - ReadM SNP 0041.scaffold00154 1011530 1 T G - ReadM SNP 0041.scaffold00154 1011568 1 C A - ReadM SNP 0041.scaffold00154 1011623 1 T C - ReadM SNP 0041.scaffold00154 1011678 1 C G - ReadM SNP 0041.scaffold00154 1011773 1 C T - ReadM SNP 0041.scaffold00154 1011844 1 G A - ReadM SNP 0041.scaffold00154 1012053 1 A G - ReadM SNP 0041.scaffold00154 1012180 1 G A - ReadM INDEL 0041.scaffold00154 1012220 2 .. AG - ReadM SNP 0041.scaffold00154 1012239 1 G A - ReadM SNP 0041.scaffold00154 1012337 1 T C - ReadM SNP 0041.scaffold00154 1012552 1 C T - ReadM SNP 0041.scaffold00154 1012745 1 G A - ReadM SNP 0041.scaffold00154 1012829 1 T C - ReadM SNP 0041.scaffold00154 1012836 1 G A - ReadM SNP 0041.scaffold00154 1012855 1 C A - ReadM SNP 0041.scaffold00154 1012871 1 C T - ReadM SNP 0041.scaffold00154 1012892 1 G A - Both SNP 0041.scaffold00154 1013037 1 C A scaffold19486 Both SNP 0041.scaffold00154 1013039 1 G A scaffold19486 ReadM INDEL 0041.scaffold00154 1013196 1 T . - ReadM SNP 0041.scaffold00154 1013229 1 G T - ReadM SNP 0041.scaffold00154 1013234 1 T G - ReadM SNP 0041.scaffold00154 1013471 1 C T - ReadM SNP 0041.scaffold00154 1013485 1 A G - ReadM SNP 0041.scaffold00154 1013503 1 A G - Both SNP 0041.scaffold00154 1013635 1 C T scaffold19486 ReadM SNP 0041.scaffold00154 1013674 1 C T - ReadM SNP 0041.scaffold00154 1013778 1 C A - ReadM SNP 0041.scaffold00154 1013807 1 T C - ReadM SNP 0041.scaffold00154 1013819 1 C A - Both SNP 0041.scaffold00154 1013843 1 G A scaffold19486 Both SNP 0041.scaffold00154 1013921 1 C A scaffold19486 Both SNP 0041.scaffold00154 1013949 1 T A scaffold19486 ReadM SNP 0041.scaffold00154 1014027 1 G A - ReadM SNP 0041.scaffold00154 1014320 1 C T - ReadM SNP 0041.scaffold00154 1014396 1 G A - ReadM SNP 0041.scaffold00154 1014399 1 C A - ReadM SNP 0041.scaffold00154 1014410 1 A T - ReadM SNP 0041.scaffold00154 1014717 1 A T - ReadM SNP 0041.scaffold00154 1014734 1 G A - Both INDEL 0041.scaffold00154 1014843 1 . C scaffold19486 Both SNP 0041.scaffold00154 1014994 1 T G scaffold19486 Both SNP 0041.scaffold00154 1015055 1 G A scaffold19486 Both SNP 0041.scaffold00154 1015167 1 T C scaffold19486 Both SNP 0041.scaffold00154 1015230 1 C T scaffold19486 Both SNP 0041.scaffold00154 1015298 1 T C scaffold19486 ReadM SNP 0041.scaffold00154 1015358 1 C T - Both SNP 0041.scaffold00154 1015549 1 T G scaffold19486 Both SNP 0041.scaffold00154 1016251 1 C A scaffold19486 Both SNP 0041.scaffold00154 1016266 1 T A scaffold19486 Both SNP 0041.scaffold00154 1016309 1 T C scaffold19486 ScafM SNP 0041.scaffold00154 1016366 1 C A scaffold19486 ScafM SNP 0041.scaffold00154 1016476 1 T G scaffold19486 Both SNP 0041.scaffold00154 1016551 1 T C scaffold19486 ReadM INDEL 0041.scaffold00154 1016641 1 T . - ReadM SNP 0041.scaffold00154 1016671 1 T C - ReadM SNP 0041.scaffold00154 1016723 1 G A - ReadM SNP 0041.scaffold00154 1016792 1 A T - ReadM SNP 0041.scaffold00154 1016812 1 G T - ReadM SNP 0041.scaffold00154 1016835 1 G A - ReadM SNP 0041.scaffold00154 1017035 1 T C - ReadM SNP 0041.scaffold00154 1017082 1 A G - ReadM INDEL 0041.scaffold00154 1017156 1 T . - ReadM SNP 0041.scaffold00154 1017259 1 T A - ReadM INDEL 0041.scaffold00154 1017378 1 A . - ReadM SNP 0041.scaffold00154 1018530 1 G T - ReadM SNP 0041.scaffold00154 1018549 1 C T - ReadM SNP 0041.scaffold00154 1018620 1 C A - ReadM SNP 0041.scaffold00154 1019224 1 T C - ReadM SNP 0041.scaffold00154 1020231 1 T C - ReadM SNP 0041.scaffold00154 1020235 1 G T - ReadM SNP 0041.scaffold00154 1020256 1 G A - ReadM INDEL 0041.scaffold00154 1020355 1 . A - ReadM SNP 0041.scaffold00154 1020391 1 C T - ReadM SNP 0041.scaffold00154 1020577 1 T C - ReadM INDEL 0041.scaffold00154 1020584 1 G . - ReadM SNP 0041.scaffold00154 1020657 1 A G - ReadM SNP 0041.scaffold00154 1020669 1 A C - ReadM SNP 0041.scaffold00154 1020710 1 T C - ReadM SNP 0041.scaffold00154 1020818 1 T A - ReadM SNP 0041.scaffold00154 1020927 1 T C - ReadM SNP 0041.scaffold00154 1021336 1 G A - ReadM SNP 0041.scaffold00154 1021446 1 A T - ReadM SNP 0041.scaffold00154 1021459 1 A G - ReadM SNP 0041.scaffold00154 1021533 1 T A - ReadM SNP 0041.scaffold00154 1021681 1 A C - ReadM SNP 0041.scaffold00154 1021692 1 A T - ReadM SNP 0041.scaffold00154 1021847 1 A G - ReadM SNP 0041.scaffold00154 1021876 1 A C - ReadM SNP 0041.scaffold00154 1021909 1 C T - Both SNP 0041.scaffold00154 1021997 1 C G scaffold4520 Both SNP 0041.scaffold00154 1022024 1 C A scaffold4520 Both SNP 0041.scaffold00154 1022047 1 A T scaffold4520 Both SNP 0041.scaffold00154 1022055 1 G A scaffold4520 Both SNP 0041.scaffold00154 1022058 1 T G scaffold4520 Both SNP 0041.scaffold00154 1022254 1 T C scaffold4520 Both SNP 0041.scaffold00154 1022394 1 T G scaffold4520 Both SNP 0041.scaffold00154 1022518 1 A C scaffold4520 ReadM SNP 0041.scaffold00154 1022636 1 A T - ReadM SNP 0041.scaffold00154 1022658 2 CA TG - ReadM SNP 0041.scaffold00154 1022724 1 G A - ReadM SNP 0041.scaffold00154 1022796 1 C T - ReadM SNP 0041.scaffold00154 1022803 1 T G - ReadM SNP 0041.scaffold00154 1022857 1 G A - ReadM SNP 0041.scaffold00154 1023178 1 G T - ReadM SNP 0041.scaffold00154 1023256 1 C T - ReadM SNP 0041.scaffold00154 1023452 1 A C - ReadM SNP 0041.scaffold00154 1023525 1 T G - ReadM SNP 0041.scaffold00154 1023626 1 A G - ReadM SNP 0041.scaffold00154 1023645 1 C T - Both SNP 0041.scaffold00154 1023758 1 C T scaffold4520 Both SNP 0041.scaffold00154 1023875 1 T C scaffold4520 Both SNP 0041.scaffold00154 1023892 1 A T scaffold4520 Both SNP 0041.scaffold00154 1024076 1 G C scaffold4520 Both SNP 0041.scaffold00154 1024091 1 G T scaffold4520 Both SNP 0041.scaffold00154 1024109 1 C T scaffold4520 Both SNP 0041.scaffold00154 1024230 1 G A scaffold4520 Both SNP 0041.scaffold00154 1024287 1 C G scaffold4520 Both SNP 0041.scaffold00154 1024437 1 T C scaffold4520 Both SNP 0041.scaffold00154 1024478 1 C T scaffold4520 Both SNP 0041.scaffold00154 1024585 1 G A scaffold4520 Both SNP 0041.scaffold00154 1024641 1 G A scaffold4520 Both SNP 0041.scaffold00154 1024646 1 G A scaffold4520 ScafM SNP 0041.scaffold00154 1024677 2 AT CC scaffold4520 Both SNP 0041.scaffold00154 1024788 1 C T scaffold4520 Both SNP 0041.scaffold00154 1024803 1 G A scaffold4520 Both SNP 0041.scaffold00154 1024923 1 T G scaffold4520 Both SNP 0041.scaffold00154 1025055 1 T C scaffold4520 Both SNP 0041.scaffold00154 1025195 1 C A scaffold4520 Both INDEL 0041.scaffold00154 1025256 1 C . scaffold4520 Both SNP 0041.scaffold00154 1025278 1 C T scaffold4520 Both SNP 0041.scaffold00154 1025306 1 G A scaffold4520 Both SNP 0041.scaffold00154 1025325 1 C T scaffold4520 Both SNP 0041.scaffold00154 1025348 1 T C scaffold4520 Both SNP 0041.scaffold00154 1025421 1 A T scaffold4520 Both SNP 0041.scaffold00154 1025520 1 C T scaffold4520 Both SNP 0041.scaffold00154 1025537 1 C A scaffold4520 Both SNP 0041.scaffold00154 1025668 1 C T scaffold4520 Both SNP 0041.scaffold00154 1025687 1 T A scaffold4520 Both SNP 0041.scaffold00154 1025717 1 A G scaffold4520 Both INDEL 0041.scaffold00154 1025769 1 A . scaffold4520 Both SNP 0041.scaffold00154 1025811 1 G A scaffold4520 Both SNP 0041.scaffold00154 1025911 1 G A scaffold4520 Both SNP 0041.scaffold00154 1025964 1 G A scaffold4520 Both SNP 0041.scaffold00154 1026178 1 T G scaffold4520 Both SNP 0041.scaffold00154 1026194 1 T C scaffold4520 Both SNP 0041.scaffold00154 1026368 1 A T scaffold4520 Both SNP 0041.scaffold00154 1026478 1 C T scaffold4520 Both SNP 0041.scaffold00154 1026484 1 C G scaffold4520 Both SNP 0041.scaffold00154 1026567 1 T A scaffold4520 Both SNP 0041.scaffold00154 1026605 1 T G scaffold4520 Both SNP 0041.scaffold00154 1026628 1 T G scaffold4520 ReadM SNP 0041.scaffold00154 1026651 1 C A - ReadM SNP 0041.scaffold00154 1026665 1 A T - ReadM SNP 0041.scaffold00154 1026753 1 C T - ReadM SNP 0041.scaffold00154 1027023 1 G A - ReadM SNP 0041.scaffold00154 1027025 1 G A - ReadM SNP 0041.scaffold00154 1027087 1 T C - Both SNP 0041.scaffold00154 1027118 1 T A scaffold4520 ScafM SNP 0041.scaffold00154 1027314 1 T C scaffold4520 ScafM SNP 0041.scaffold00154 1027323 1 T C scaffold4520 ScafM SNP 0041.scaffold00154 1027326 1 A G scaffold4520 ScafM SNP 0041.scaffold00154 1027337 1 A G scaffold4520 ReadM SNP 0041.scaffold00154 1027393 1 C T - ReadM SNP 0041.scaffold00154 1027432 1 A G - ReadM INDEL 0041.scaffold00154 1027456 1 A . - ReadM SNP 0041.scaffold00154 1027479 1 G A - ReadM SNP 0041.scaffold00154 1027524 1 A C - ReadM INDEL 0041.scaffold00154 1027616 1 . T - ReadM SNP 0041.scaffold00154 1027658 1 C T - ReadM SNP 0041.scaffold00154 1027762 1 A T - ReadM SNP 0041.scaffold00154 1027889 1 A C - ReadM SNP 0041.scaffold00154 1027921 1 A C - ReadM SNP 0041.scaffold00154 1028084 1 A G - Both SNP 0041.scaffold00154 1028180 1 A C scaffold4520 Both SNP 0041.scaffold00154 1028249 1 A C scaffold4520 Both SNP 0041.scaffold00154 1028251 1 T G scaffold4520 Both SNP 0041.scaffold00154 1028340 1 T C scaffold4520 Both SNP 0041.scaffold00154 1028365 1 T C scaffold4520 Both SNP 0041.scaffold00154 1028378 1 A G scaffold4520 ScafM SNP 0041.scaffold00154 1028400 1 A G scaffold4520 ScafM SNP 0041.scaffold00154 1028440 1 G A scaffold4520 ReadM SNP 0041.scaffold00154 1028517 1 C G - ReadM SNP 0041.scaffold00154 1028559 1 C T - ReadM SNP 0041.scaffold00154 1028575 1 T G - ReadM SNP 0041.scaffold00154 1028717 1 A T - ReadM SNP 0041.scaffold00154 1028787 1 G A - ReadM SNP 0041.scaffold00154 1029024 1 C T - ReadM SNP 0041.scaffold00154 1029117 1 C T - ReadM SNP 0041.scaffold00154 1029132 1 C T - ReadM SNP 0041.scaffold00154 1029243 1 C A - ReadM SNP 0041.scaffold00154 1029298 1 T A - ReadM SNP 0041.scaffold00154 1029307 1 T C - ReadM SNP 0041.scaffold00154 1029471 1 C T - ReadM SNP 0041.scaffold00154 1029473 1 A G - ReadM SNP 0041.scaffold00154 1029671 1 G T - ReadM SNP 0041.scaffold00154 1029700 1 A C - ReadM SNP 0041.scaffold00154 1029705 1 A C - ReadM SNP 0041.scaffold00154 1029898 1 T C - ReadM SNP 0041.scaffold00154 1029912 1 A G - ReadM SNP 0041.scaffold00154 1030015 1 C T - ReadM SNP 0041.scaffold00154 1030040 1 T C - ReadM SNP 0041.scaffold00154 1030129 1 G A - ReadM SNP 0041.scaffold00154 1030150 1 G C - ReadM SNP 0041.scaffold00154 1030346 1 T C - ReadM SNP 0041.scaffold00154 1030365 1 G A - ReadM INDEL 0041.scaffold00154 1030423 1 T . - ReadM SNP 0041.scaffold00154 1030534 1 C T - ReadM SNP 0041.scaffold00154 1030783 1 A G - ReadM SNP 0041.scaffold00154 1030880 1 T C - ReadM SNP 0041.scaffold00154 1030971 1 G A - ReadM SNP 0041.scaffold00154 1031102 1 T G - ReadM SNP 0041.scaffold00154 1031195 1 G T - ReadM SNP 0041.scaffold00154 1031269 1 C T - ReadM SNP 0041.scaffold00154 1031329 1 T G - ReadM SNP 0041.scaffold00154 1031359 1 G C - ReadM SNP 0041.scaffold00154 1031449 1 T G - ReadM SNP 0041.scaffold00154 1031465 1 C T - Both SNP 0041.scaffold00154 1031527 1 C T scaffold4520 ReadM SNP 0041.scaffold00154 1031630 1 A T - ReadM SNP 0041.scaffold00154 1031703 1 C T - ReadM SNP 0041.scaffold00154 1031726 1 A T - ReadM SNP 0041.scaffold00154 1031760 1 A G - ReadM SNP 0041.scaffold00154 1031864 1 A T - ReadM SNP 0041.scaffold00154 1032030 1 G T - ReadM SNP 0041.scaffold00154 1032170 1 G T - ReadM SNP 0041.scaffold00154 1032184 1 A G - ReadM SNP 0041.scaffold00154 1032221 1 G A - ReadM SNP 0041.scaffold00154 1032402 1 G A - ReadM SNP 0041.scaffold00154 1032411 1 G T - ReadM INDEL 0041.scaffold00154 1032505 1 G . - ReadM SNP 0041.scaffold00154 1032537 1 T C - ReadM SNP 0041.scaffold00154 1032575 1 T C - ReadM SNP 0041.scaffold00154 1032654 1 C T - ReadM SNP 0041.scaffold00154 1032700 1 G T - ReadM SNP 0041.scaffold00154 1032723 1 C T - ReadM SNP 0041.scaffold00154 1032843 1 T C - ReadM SNP 0041.scaffold00154 1032963 1 G A - ReadM SNP 0041.scaffold00154 1032982 1 G A - ReadM INDEL 0041.scaffold00154 1032984 1 A . - ReadM SNP 0041.scaffold00154 1033026 1 T A - Both SNP 0041.scaffold00154 1033075 1 T C scaffold4520 Both SNP 0041.scaffold00154 1033110 1 A G scaffold4520 Both SNP 0041.scaffold00154 1033130 1 C A scaffold4520 ReadM SNP 0041.scaffold00154 1033212 1 C T - Both SNP 0041.scaffold00154 1033237 1 T C scaffold4520 Both INDEL 0041.scaffold00154 1033378 1 . T scaffold4520 Both SNP 0041.scaffold00154 1033494 1 T C scaffold4520 Both SNP 0041.scaffold00154 1033517 1 G C scaffold4520 Both SNP 0041.scaffold00154 1033649 1 T C scaffold4520 ScafM INDEL 0041.scaffold00154 1033734 5 TTTTT ..... scaffold4520 ScafM SNP 0041.scaffold00154 1033743 1 G C scaffold4520 Both SNP 0041.scaffold00154 1033799 1 C G scaffold4520 Both SNP 0041.scaffold00154 1033841 1 A G scaffold4520 Both SNP 0041.scaffold00154 1033867 1 C A scaffold4520 Both SNP 0041.scaffold00154 1034086 1 G A scaffold4520 ReadM SNP 0041.scaffold00154 1034107 1 C A - ReadM SNP 0041.scaffold00154 1034165 1 A G - ReadM SNP 0041.scaffold00154 1034211 1 C T - ReadM INDEL 0041.scaffold00154 1034365 1 . C - ReadM SNP 0041.scaffold00154 1034487 1 T A - ReadM SNP 0041.scaffold00154 1034652 1 G T - ReadM SNP 0041.scaffold00154 1034678 1 T C - ReadM SNP 0041.scaffold00154 1035135 1 C A - ReadM SNP 0041.scaffold00154 1035252 1 T C - ReadM SNP 0041.scaffold00154 1035490 1 A G - ReadM SNP 0041.scaffold00154 1035512 1 T A - ReadM SNP 0041.scaffold00154 1035517 1 A T - ScafM SNP 0041.scaffold00154 1038985 1 A G scaffold4520 ScafM SNP 0041.scaffold00154 1039054 1 C T scaffold4520 ScafM SNP 0041.scaffold00154 1039059 1 C T scaffold4520 ReadM SNP 0041.scaffold00154 1039481 1 T C - ScafM SNP 0041.scaffold00154 1039806 1 A G scaffold4520 ScafM SNP 0041.scaffold00154 1039829 1 T C scaffold4520 ScafM SNP 0041.scaffold00154 1039857 1 T G scaffold4520 ScafM SNP 0041.scaffold00154 1039934 1 A T scaffold4520 ScafM INDEL 0042.scaffold00155 6384 2 CA .T scaffold40847 ScafM SNP 0042.scaffold00155 6401 1 T C scaffold40847 ScafM INDEL 0042.scaffold00155 6448 1 . G scaffold40847 ScafM INDEL 0042.scaffold00155 6637 1 . C scaffold40847 ScafM SNP 0042.scaffold00155 6648 1 C A scaffold40847 ScafM SNP 0042.scaffold00155 6660 1 C A scaffold40847 ScafM SNP 0042.scaffold00155 6676 1 G T scaffold40847 ScafM SNP 0042.scaffold00155 6736 1 G A scaffold40847 ScafM SNP 0042.scaffold00155 6744 1 A G scaffold40847 ScafM INDEL 0042.scaffold00155 6752 3 ... ATT scaffold40847 ScafM INDEL 0042.scaffold00155 6867 1 . A scaffold40847 ScafM SNP 0042.scaffold00155 6889 1 G A scaffold40847 ScafM SNP 0042.scaffold00155 7129 1 C G scaffold4051 ScafM SNP 0042.scaffold00155 7204 1 C T scaffold4051 ScafM SNP 0042.scaffold00155 7237 1 T C scaffold4051 ScafM SNP 0042.scaffold00155 7256 1 G A scaffold4051 ScafM SNP 0042.scaffold00155 7787 1 T A scaffold38557 ScafM SNP 0042.scaffold00155 7801 1 A C scaffold38557 ScafM SNP 0042.scaffold00155 7832 1 A G scaffold38557 ScafM SNP 0042.scaffold00155 7884 1 C A scaffold38557 ScafM SNP 0042.scaffold00155 7906 1 A C scaffold38557 ScafM SNP 0042.scaffold00155 7910 1 G T scaffold38557 ScafM SNP 0042.scaffold00155 9715 1 T C scaffold4197 ScafM SNP 0042.scaffold00155 9735 1 G A scaffold4197 ScafM SNP 0042.scaffold00155 9748 1 A G scaffold4197 ScafM SNP 0042.scaffold00155 9783 1 A G scaffold4197 ScafM SNP 0042.scaffold00155 9829 1 T G scaffold4197 ScafM SNP 0042.scaffold00155 9834 1 A G scaffold4197 ScafM SNP 0042.scaffold00155 9840 1 G T scaffold4197 ScafM INDEL 0042.scaffold00155 9841 3 ... TTT scaffold4197 ScafM SNP 0042.scaffold00155 9876 1 C T scaffold4197 ScafM SNP 0042.scaffold00155 9881 1 C T scaffold4197 ScafM SNP 0042.scaffold00155 9909 1 A T scaffold4197 ScafM SNP 0042.scaffold00155 9918 1 C T scaffold4197 ScafM SNP 0042.scaffold00155 12959 1 G A scaffold47166 ScafM SNP 0042.scaffold00155 13061 1 T C scaffold47166 ScafM SNP 0042.scaffold00155 13076 1 G A scaffold47166 ScafM SNP 0042.scaffold00155 13188 1 A C scaffold47166 ScafM SNP 0042.scaffold00155 13212 1 C T scaffold47166 ScafM SNP 0042.scaffold00155 13429 1 C T scaffold47166 ScafM SNP 0042.scaffold00155 13542 1 G T scaffold47166 ScafM INDEL 0042.scaffold00155 13578 7 GTGGGTA ....... scaffold47166 ScafM SNP 0042.scaffold00155 13603 1 G T scaffold47166 ScafM SNP 0042.scaffold00155 13673 1 G A scaffold47166 ReadM SNP 0042.scaffold00155 24651 1 T G - ReadM SNP 0042.scaffold00155 26912 1 G T - ReadM INDEL 0042.scaffold00155 27726 1 . A - ReadM SNP 0042.scaffold00155 61982 1 C T - ScafM SNP 0042.scaffold00155 69361 1 C T scaffold8746 ScafM SNP 0042.scaffold00155 82412 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 82439 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 82877 1 G T scaffold8746 ScafM SNP 0042.scaffold00155 82946 1 T C scaffold8746 ScafM SNP 0042.scaffold00155 83146 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 83488 1 G A scaffold8746 ScafM INDEL 0042.scaffold00155 83492 1 . T scaffold8746 ScafM SNP 0042.scaffold00155 83534 1 C T scaffold8746 ScafM INDEL 0042.scaffold00155 83612 1 A . scaffold8746 ScafM SNP 0042.scaffold00155 83662 1 T C scaffold8746 ScafM SNP 0042.scaffold00155 83839 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 83882 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 84214 1 C G scaffold8746 ScafM INDEL 0042.scaffold00155 85023 3 ... GAC scaffold8746 ScafM INDEL 0042.scaffold00155 85108 9 ......... TAAATATTT scaffold8746 ScafM SNP 0042.scaffold00155 85144 1 C T scaffold8746 ScafM SNP 0042.scaffold00155 85230 1 T A scaffold8746 ScafM INDEL 0042.scaffold00155 85437 1 G . scaffold8746 ScafM INDEL 0042.scaffold00155 85508 32 ................................ CGCCTACGTATCCCGAAGGATTCAAAGCCACA scaffold8746 ScafM INDEL 0042.scaffold00155 85532 17 ................. TCACGGATCACGGAATG scaffold8746 ScafM INDEL 0042.scaffold00155 85536 4 .... ATTT scaffold8746 ScafM INDEL 0042.scaffold00155 85538 2 .. TT scaffold8746 ScafM SNP 0042.scaffold00155 85551 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 85554 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 85576 1 T A scaffold8746 ScafM SNP 0042.scaffold00155 85807 1 T A scaffold8746 ScafM SNP 0042.scaffold00155 85809 1 T A scaffold8746 ScafM SNP 0042.scaffold00155 85965 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 86000 1 C T scaffold8746 ScafM SNP 0042.scaffold00155 86008 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 86546 1 T G scaffold8746 ScafM SNP 0042.scaffold00155 86751 1 G A scaffold8746 ScafM SNP 0042.scaffold00155 86852 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 87026 1 G A scaffold8746 ScafM SNP 0042.scaffold00155 87123 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 87143 1 C T scaffold8746 ScafM SNP 0042.scaffold00155 87458 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 87549 1 T C scaffold8746 ScafM SNP 0042.scaffold00155 87731 1 C T scaffold8746 ScafM SNP 0042.scaffold00155 87736 1 G A scaffold8746 ScafM INDEL 0042.scaffold00155 92524 1 A . scaffold8746 ScafM SNP 0042.scaffold00155 94385 1 A T scaffold8746 ScafM SNP 0042.scaffold00155 94865 1 G T scaffold8746 ScafM SNP 0042.scaffold00155 94906 1 T C scaffold8746 ScafM SNP 0042.scaffold00155 97746 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 97805 1 A C scaffold8746 ScafM SNP 0042.scaffold00155 98053 1 A G scaffold8746 ScafM SNP 0042.scaffold00155 98494 1 T C scaffold8746 ScafM SNP 0042.scaffold00155 99634 1 G A scaffold8746 ScafM SNP 0042.scaffold00155 99651 1 T A scaffold8746 ScafM SNP 0042.scaffold00155 108507 1 T C scaffold8880 ScafM SNP 0042.scaffold00155 108570 1 G A scaffold8880 ScafM SNP 0042.scaffold00155 108895 1 A T scaffold8880 ScafM SNP 0042.scaffold00155 108976 1 A G scaffold8880 ScafM SNP 0042.scaffold00155 109215 1 T G scaffold8880 ScafM SNP 0042.scaffold00155 109245 1 A T scaffold8880 ReadM SNP 0042.scaffold00155 113952 1 C T - ScafM SNP 0042.scaffold00155 117963 1 C T scaffold945 ScafM SNP 0042.scaffold00155 117994 1 T G scaffold945 ScafM INDEL 0042.scaffold00155 118116 1 . G scaffold945 ScafM SNP 0042.scaffold00155 118156 1 C A scaffold945 ScafM SNP 0042.scaffold00155 118176 1 T C scaffold945 ScafM SNP 0042.scaffold00155 124595 1 G C scaffold945 ScafM SNP 0042.scaffold00155 124646 1 C T scaffold945 ScafM SNP 0042.scaffold00155 124685 1 T C scaffold945 ScafM SNP 0042.scaffold00155 124706 1 A T scaffold945 ScafM SNP 0042.scaffold00155 124708 1 A C scaffold945 ScafM SNP 0042.scaffold00155 124712 1 G A scaffold945 ScafM SNP 0042.scaffold00155 124719 1 C T scaffold945 ScafM SNP 0042.scaffold00155 124725 1 A G scaffold945 ReadM SNP 0042.scaffold00155 136178 1 C G - ReadM INDEL 0042.scaffold00155 136603 3 ... AAA - ScafM SNP 0042.scaffold00155 139371 1 G A scaffold945 ScafM SNP 0042.scaffold00155 139525 1 T C scaffold945 ScafM SNP 0042.scaffold00155 139782 1 T C scaffold945 ScafM INDEL 0042.scaffold00155 140422 2 AA .. scaffold945 ScafM SNP 0042.scaffold00155 140729 1 C A scaffold945 ScafM SNP 0042.scaffold00155 140749 1 T A scaffold945 ScafM SNP 0042.scaffold00155 140771 1 G T scaffold945 ScafM SNP 0042.scaffold00155 159779 1 A G scaffold945 ReadM SNP 0042.scaffold00155 166088 1 T C - ScafM SNP 0042.scaffold00155 166943 1 C T scaffold945 ScafM SNP 0042.scaffold00155 170236 1 G A scaffold945 ScafM INDEL 0042.scaffold00155 170305 7 TGATATA ....... scaffold945 ScafM SNP 0042.scaffold00155 170317 1 A G scaffold945 ScafM SNP 0042.scaffold00155 170337 1 A G scaffold945 ScafM INDEL 0042.scaffold00155 170343 1 . A scaffold945 ScafM INDEL 0042.scaffold00155 170372 4 .... TGGA scaffold945 ScafM INDEL 0042.scaffold00155 170393 2 AA .. scaffold945 ScafM INDEL 0042.scaffold00155 170401 2 AC .. scaffold945 ScafM SNP 0042.scaffold00155 170427 1 T A scaffold945 ScafM SNP 0042.scaffold00155 170471 1 G A scaffold945 ScafM SNP 0042.scaffold00155 170589 1 T C scaffold945 ScafM SNP 0042.scaffold00155 170797 1 C G scaffold945 ScafM SNP 0042.scaffold00155 170965 1 T A scaffold945 ScafM SNP 0042.scaffold00155 172001 1 A C scaffold945 ScafM SNP 0042.scaffold00155 172613 1 T G scaffold945 ScafM SNP 0042.scaffold00155 172642 1 A C scaffold945 ScafM SNP 0042.scaffold00155 173101 1 G T scaffold945 ScafM SNP 0042.scaffold00155 173189 1 G T scaffold945 ScafM SNP 0042.scaffold00155 173300 1 C A scaffold945 ScafM INDEL 0042.scaffold00155 173707 1 . A scaffold945 ScafM INDEL 0042.scaffold00155 174284 44 ............................................ AAATTGCATCTTTTTGGGTGAACAGAAGAAAAAGTTTCATCAAT scaffold945 ScafM INDEL 0042.scaffold00155 174287 8 ........ CAGCAGAA scaffold945 ScafM SNP 0042.scaffold00155 174355 1 A G scaffold945 ScafM SNP 0042.scaffold00155 175645 1 A C scaffold945 ScafM SNP 0042.scaffold00155 175809 1 A G scaffold945 ScafM SNP 0042.scaffold00155 175949 1 A T scaffold945 ScafM SNP 0042.scaffold00155 176900 1 T G scaffold945 ScafM SNP 0042.scaffold00155 176942 1 T A scaffold945 ScafM SNP 0042.scaffold00155 177059 1 A G scaffold945 ScafM SNP 0042.scaffold00155 177246 1 A T scaffold945 ScafM SNP 0042.scaffold00155 177261 1 T G scaffold945 ScafM SNP 0042.scaffold00155 177469 1 C T scaffold945 ScafM SNP 0042.scaffold00155 177739 1 C T scaffold945 ScafM INDEL 0042.scaffold00155 178138 1 . T scaffold945 ScafM SNP 0042.scaffold00155 178175 2 GG AA scaffold945 ScafM SNP 0042.scaffold00155 181623 1 G A scaffold945 ScafM SNP 0042.scaffold00155 181828 1 T C scaffold945 ScafM SNP 0042.scaffold00155 181945 1 G A scaffold945 ScafM SNP 0042.scaffold00155 181989 1 C T scaffold945 ScafM SNP 0042.scaffold00155 182055 1 C T scaffold945 ScafM SNP 0042.scaffold00155 182154 1 T C scaffold945 ScafM SNP 0042.scaffold00155 182237 1 T G scaffold945 ScafM SNP 0042.scaffold00155 182321 1 C A scaffold945 ScafM SNP 0042.scaffold00155 182503 1 T C scaffold945 ScafM SNP 0042.scaffold00155 182537 1 G T scaffold945 ScafM SNP 0042.scaffold00155 182541 1 G T scaffold945 ScafM SNP 0042.scaffold00155 187799 1 T C scaffold945 ScafM SNP 0042.scaffold00155 187921 1 C T scaffold945 ScafM SNP 0042.scaffold00155 188016 1 A G scaffold945 ScafM SNP 0042.scaffold00155 188145 1 C G scaffold945 ScafM SNP 0042.scaffold00155 188178 1 A C scaffold945 ScafM SNP 0042.scaffold00155 188666 1 T C scaffold945 ScafM SNP 0042.scaffold00155 188677 1 A G scaffold945 ScafM SNP 0042.scaffold00155 189022 1 C T scaffold945 ScafM INDEL 0042.scaffold00155 189074 1 . A scaffold945 ScafM SNP 0042.scaffold00155 189411 1 G A scaffold945 ScafM SNP 0042.scaffold00155 189430 1 C T scaffold945 ScafM SNP 0042.scaffold00155 189480 1 G A scaffold945 ScafM SNP 0042.scaffold00155 189977 1 G A scaffold945 ScafM SNP 0042.scaffold00155 190123 1 A G scaffold945 ScafM SNP 0042.scaffold00155 190191 1 A G scaffold945 ScafM SNP 0042.scaffold00155 190313 1 G A scaffold945 ScafM SNP 0042.scaffold00155 190768 1 A T scaffold945 ScafM SNP 0042.scaffold00155 190815 1 A T scaffold945 ScafM SNP 0042.scaffold00155 190975 1 T A scaffold945 ScafM INDEL 0042.scaffold00155 191138 1 A . scaffold945 ScafM SNP 0042.scaffold00155 191198 1 A G scaffold945 ScafM INDEL 0042.scaffold00155 193322 1 . T scaffold945 ScafM SNP 0042.scaffold00155 198780 1 T C scaffold28630 ScafM SNP 0042.scaffold00155 198934 1 T C scaffold28630 ScafM INDEL 0042.scaffold00155 199271 14 .............. GCATCATACAAAGC scaffold28630 ScafM SNP 0042.scaffold00155 199333 1 G T scaffold28630 ScafM SNP 0042.scaffold00155 199842 1 C G scaffold28630 ScafM SNP 0042.scaffold00155 199915 1 A G scaffold28630 ScafM SNP 0042.scaffold00155 200032 1 A T scaffold28630 ScafM SNP 0042.scaffold00155 200135 1 T C scaffold28630 ScafM SNP 0042.scaffold00155 200167 1 C G scaffold28630 ScafM INDEL 0042.scaffold00155 200210 1 A . scaffold28630 ScafM SNP 0042.scaffold00155 201007 1 G C scaffold29869 ScafM SNP 0042.scaffold00155 201039 1 A G scaffold29869 ScafM INDEL 0042.scaffold00155 201051 4 .... AAGT scaffold29869 ScafM SNP 0042.scaffold00155 201277 1 T C scaffold29869 ScafM SNP 0042.scaffold00155 201376 1 A T scaffold29869 ScafM SNP 0042.scaffold00155 204465 1 T A C19750957 ScafM SNP 0042.scaffold00155 204531 1 G T C19750957 ScafM SNP 0042.scaffold00155 204686 1 G A C19750957 ScafM SNP 0042.scaffold00155 204807 1 G A C19750957 ScafM SNP 0042.scaffold00155 205231 1 C T C19750957 ScafM SNP 0042.scaffold00155 205233 1 A G C19750957 ScafM SNP 0042.scaffold00155 205642 1 G T C19750957 ScafM SNP 0042.scaffold00155 205806 1 T C C19750957 ScafM SNP 0042.scaffold00155 207121 1 T G scaffold6397 ScafM INDEL 0042.scaffold00155 207242 4 CCTC .... scaffold6397 ScafM SNP 0042.scaffold00155 207265 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 208833 1 C T scaffold42873 ScafM SNP 0042.scaffold00155 208848 1 G A scaffold42873 ScafM SNP 0042.scaffold00155 208857 1 G A scaffold42873 ScafM SNP 0042.scaffold00155 208883 1 A G scaffold42873 ScafM SNP 0042.scaffold00155 208909 1 A C scaffold42873 ScafM SNP 0042.scaffold00155 209298 1 A T scaffold42873 ScafM SNP 0042.scaffold00155 209304 1 G A scaffold42873 ScafM SNP 0042.scaffold00155 209323 1 A G scaffold42873 ScafM SNP 0042.scaffold00155 209361 1 G A scaffold42873 ScafM SNP 0042.scaffold00155 209385 1 C A scaffold42873 ScafM SNP 0042.scaffold00155 209399 1 G A scaffold42873 ScafM SNP 0042.scaffold00155 209823 1 G T scaffold42873 ScafM SNP 0042.scaffold00155 209846 1 T G scaffold42873 ScafM SNP 0042.scaffold00155 231783 1 A G scaffold1216 ScafM SNP 0042.scaffold00155 234924 1 T C scaffold1216 ScafM SNP 0042.scaffold00155 235137 1 G A scaffold1216 ScafM INDEL 0042.scaffold00155 248839 7 ....... GACATGA scaffold1216 ScafM SNP 0042.scaffold00155 248917 1 A G scaffold1216 ScafM SNP 0042.scaffold00155 248945 1 G A scaffold1216 ScafM INDEL 0042.scaffold00155 248983 1 T . scaffold1216 ScafM SNP 0042.scaffold00155 250284 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 250303 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 250327 1 T C scaffold6397 ScafM INDEL 0042.scaffold00155 250333 1 A . scaffold6397 ScafM SNP 0042.scaffold00155 250339 1 C A scaffold6397 ScafM SNP 0042.scaffold00155 250380 1 A T scaffold6397 ScafM SNP 0042.scaffold00155 250390 1 A T scaffold6397 ScafM SNP 0042.scaffold00155 250401 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 250414 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 250430 1 A T scaffold6397 ScafM INDEL 0042.scaffold00155 250440 6 ...... TCTCTG scaffold6397 ScafM SNP 0042.scaffold00155 250477 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 250498 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 250578 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 250580 1 C A scaffold6397 ScafM SNP 0042.scaffold00155 250613 1 A G scaffold6397 ReadM INDEL 0042.scaffold00155 255681 1 T . - ScafM SNP 0042.scaffold00155 273558 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 273570 2 TG AC scaffold6397 ScafM SNP 0042.scaffold00155 273582 1 A T scaffold6397 ScafM SNP 0042.scaffold00155 273587 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 273606 1 G A scaffold6397 ScafM INDEL 0042.scaffold00155 273646 1 . G scaffold6397 ScafM SNP 0042.scaffold00155 273661 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 273664 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 273718 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 273720 1 G A scaffold6397 ScafM INDEL 0042.scaffold00155 273724 1 . A scaffold6397 ScafM SNP 0042.scaffold00155 273748 1 T G scaffold6397 ScafM SNP 0042.scaffold00155 273757 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 273759 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 273772 1 T G scaffold6397 ScafM SNP 0042.scaffold00155 273778 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 273796 1 G C scaffold6397 ScafM SNP 0042.scaffold00155 273813 1 G C scaffold6397 ScafM SNP 0042.scaffold00155 273817 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 273826 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 273831 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 273853 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 273859 1 C G scaffold6397 ScafM SNP 0042.scaffold00155 273870 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 273872 1 G T scaffold6397 ScafM SNP 0042.scaffold00155 273997 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 274030 1 A G scaffold6397 ScafM INDEL 0042.scaffold00155 274068 1 . G scaffold6397 ScafM SNP 0042.scaffold00155 274081 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 274083 1 C A scaffold6397 ScafM SNP 0042.scaffold00155 274125 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 274154 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 274180 1 A C scaffold6397 ScafM SNP 0042.scaffold00155 274251 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 274271 1 G T scaffold6397 ScafM SNP 0042.scaffold00155 274276 1 G T scaffold6397 ScafM SNP 0042.scaffold00155 274360 2 CC AA scaffold6397 ScafM SNP 0042.scaffold00155 274405 1 C A scaffold6397 ScafM SNP 0042.scaffold00155 274446 1 A C scaffold6397 ScafM INDEL 0042.scaffold00155 274456 1 A . scaffold6397 ScafM SNP 0042.scaffold00155 274463 1 A T scaffold6397 ScafM INDEL 0042.scaffold00155 274473 7 ....... TCACAAA scaffold6397 ScafM SNP 0042.scaffold00155 274488 1 G C scaffold6397 ScafM SNP 0042.scaffold00155 274493 1 A C scaffold6397 ScafM SNP 0042.scaffold00155 274525 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 274594 1 C T scaffold6397 ScafM INDEL 0042.scaffold00155 274602 1 A . scaffold6397 ScafM SNP 0042.scaffold00155 274624 2 CA TG scaffold6397 ScafM SNP 0042.scaffold00155 274664 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 274729 1 T A scaffold6397 ScafM SNP 0042.scaffold00155 274857 1 G T scaffold6397 ScafM SNP 0042.scaffold00155 274890 1 C A scaffold6397 ScafM SNP 0042.scaffold00155 274947 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 275071 1 G A scaffold6397 ScafM INDEL 0042.scaffold00155 275169 25 TGCTCAAAGTCTTAAGTCGGAAAGA ......................... scaffold6397 ScafM SNP 0042.scaffold00155 275285 1 C G scaffold6397 ScafM SNP 0042.scaffold00155 275426 1 T G scaffold6397 ScafM SNP 0042.scaffold00155 275593 1 G A scaffold6397 ScafM SNP 0042.scaffold00155 276132 1 A T scaffold6397 ScafM SNP 0042.scaffold00155 276399 1 G T scaffold6397 ScafM INDEL 0042.scaffold00155 276467 69 ..................................................................... ATAAACCAATACTATATACCTTTTTTTATAATTTTAAGTAATGTCAAAAGTAGGAAGAATGCCACCAGT scaffold6397 ScafM SNP 0042.scaffold00155 276647 1 G T scaffold6397 ScafM SNP 0042.scaffold00155 276754 1 A G scaffold6397 ScafM SNP 0042.scaffold00155 276977 1 A T scaffold6397 ScafM SNP 0042.scaffold00155 278203 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 282338 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 282729 1 C T scaffold6397 ScafM SNP 0042.scaffold00155 283316 1 T C scaffold6397 ScafM SNP 0042.scaffold00155 302725 1 C T scaffold12961 ScafM INDEL 0042.scaffold00155 302760 1 T . scaffold12961 ScafM SNP 0042.scaffold00155 302901 1 A T scaffold12961 ScafM SNP 0042.scaffold00155 302995 1 T C scaffold12961 ScafM SNP 0042.scaffold00155 303581 1 A G scaffold12961 Both SNP 0042.scaffold00155 304772 1 T G scaffold12961 ScafM SNP 0042.scaffold00155 304832 1 T C scaffold12961 ScafM SNP 0042.scaffold00155 305095 1 T C scaffold12961 ScafM SNP 0042.scaffold00155 306605 1 A T scaffold12961 ScafM SNP 0042.scaffold00155 307918 1 C T scaffold12961 ScafM SNP 0042.scaffold00155 307975 1 C T scaffold12961 ScafM SNP 0042.scaffold00155 308312 1 G A scaffold12961 ScafM SNP 0042.scaffold00155 308475 1 C A scaffold12961 ScafM SNP 0042.scaffold00155 323490 1 A G scaffold33104 ScafM SNP 0042.scaffold00155 323564 1 A G scaffold33104 ScafM SNP 0042.scaffold00155 324006 1 C T scaffold33104 ScafM SNP 0042.scaffold00155 324128 1 C A scaffold33104 ScafM SNP 0042.scaffold00155 324602 1 A T scaffold33104 ScafM SNP 0042.scaffold00155 325658 1 T C scaffold33104 ScafM SNP 0042.scaffold00155 325720 1 T C scaffold33104 ScafM SNP 0042.scaffold00155 326411 1 C T scaffold33104 ScafM SNP 0042.scaffold00155 326970 1 C T scaffold33104 ScafM SNP 0042.scaffold00155 327824 1 G C scaffold33104 ScafM INDEL 0042.scaffold00155 327891 1 . T scaffold33104 ScafM SNP 0042.scaffold00155 328068 1 A T scaffold33104 ScafM SNP 0042.scaffold00155 328765 1 T G scaffold33104 ScafM INDEL 0042.scaffold00155 328961 1 T . scaffold33104 ScafM SNP 0042.scaffold00155 329073 1 T G scaffold33104 ScafM SNP 0042.scaffold00155 329796 1 T C scaffold33104 ScafM SNP 0042.scaffold00155 330547 1 C G scaffold33104 ScafM SNP 0042.scaffold00155 330708 1 C G scaffold33104 ScafM SNP 0042.scaffold00155 332467 1 T C scaffold33104 ScafM SNP 0042.scaffold00155 332524 1 T G scaffold33104 ScafM SNP 0042.scaffold00155 332548 1 T G scaffold33104 ScafM SNP 0042.scaffold00155 334908 1 A C scaffold33104 ScafM SNP 0042.scaffold00155 335007 1 A G scaffold33104 ScafM SNP 0042.scaffold00155 335037 1 A T scaffold33104 ScafM SNP 0042.scaffold00155 335331 1 A G scaffold33104 ScafM SNP 0042.scaffold00155 335395 1 G A scaffold33104 ScafM SNP 0042.scaffold00155 336048 1 G T scaffold33104 ScafM SNP 0042.scaffold00155 339233 1 C T scaffold33104 ScafM SNP 0042.scaffold00155 341758 1 G C scaffold4129 ScafM SNP 0042.scaffold00155 341803 1 T C scaffold4129 ScafM SNP 0042.scaffold00155 342112 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342114 3 GGG TCT scaffold27704 ScafM SNP 0042.scaffold00155 342124 1 T A scaffold27704 ScafM SNP 0042.scaffold00155 342144 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342154 1 C T scaffold27704 ScafM SNP 0042.scaffold00155 342166 1 A C scaffold27704 ScafM SNP 0042.scaffold00155 342174 1 C T scaffold27704 ScafM SNP 0042.scaffold00155 342177 1 A T scaffold27704 ScafM SNP 0042.scaffold00155 342189 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342199 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342202 1 C A scaffold27704 ScafM SNP 0042.scaffold00155 342213 1 A C scaffold27704 ScafM SNP 0042.scaffold00155 342215 2 GC AT scaffold27704 ScafM SNP 0042.scaffold00155 342218 1 C T scaffold27704 ScafM SNP 0042.scaffold00155 342229 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342236 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342238 2 AC TA scaffold27704 ScafM SNP 0042.scaffold00155 342242 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342251 1 C G scaffold27704 ScafM SNP 0042.scaffold00155 342253 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342262 1 C A scaffold27704 ScafM SNP 0042.scaffold00155 342264 4 TCGG CTAA scaffold27704 ScafM SNP 0042.scaffold00155 342274 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342277 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342282 2 TG CA scaffold27704 ScafM SNP 0042.scaffold00155 342299 2 CA TT scaffold27704 ScafM SNP 0042.scaffold00155 342303 1 C A scaffold27704 ScafM SNP 0042.scaffold00155 342307 1 T A scaffold27704 ScafM SNP 0042.scaffold00155 342318 1 C T scaffold27704 ScafM SNP 0042.scaffold00155 342323 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342331 1 C T scaffold27704 ScafM INDEL 0042.scaffold00155 342333 5 ACTCA ..... scaffold27704 ScafM INDEL 0042.scaffold00155 342340 5 AACAT ..... scaffold27704 ScafM INDEL 0042.scaffold00155 342348 6 TCGACT ...... scaffold27704 ScafM INDEL 0042.scaffold00155 342355 2 AT .. scaffold27704 ScafM SNP 0042.scaffold00155 342363 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342387 2 AT CA scaffold27704 ScafM SNP 0042.scaffold00155 342390 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342392 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342396 1 C T scaffold27704 ScafM SNP 0042.scaffold00155 342398 1 G A scaffold27704 ScafM SNP 0042.scaffold00155 342401 1 A G scaffold27704 ScafM SNP 0042.scaffold00155 342403 1 G C scaffold27704 ScafM SNP 0042.scaffold00155 342410 1 G T scaffold27704 ScafM SNP 0042.scaffold00155 342413 1 T C scaffold27704 ScafM SNP 0042.scaffold00155 342420 1 C G scaffold27704 ReadM SNP 0042.scaffold00155 345872 1 A G - ScafM SNP 0042.scaffold00155 363063 1 C T scaffold49833 ScafM SNP 0042.scaffold00155 363132 1 G C scaffold49833 ScafM SNP 0042.scaffold00155 363196 1 G T scaffold49833 ScafM SNP 0042.scaffold00155 363199 1 T C scaffold49833 ScafM SNP 0042.scaffold00155 363205 2 CA TG scaffold49833 ScafM INDEL 0042.scaffold00155 363214 4 AACC .... scaffold49833 ScafM SNP 0042.scaffold00155 363225 1 A G scaffold49833 ScafM SNP 0042.scaffold00155 363231 1 C T scaffold49833 ScafM SNP 0042.scaffold00155 363263 2 AG GT scaffold49833 ScafM SNP 0042.scaffold00155 363277 1 C T scaffold49833 ScafM SNP 0042.scaffold00155 363295 1 T A scaffold49833 ScafM SNP 0042.scaffold00155 363298 1 T A scaffold49833 ScafM SNP 0042.scaffold00155 363404 1 A G scaffold49833 ScafM SNP 0042.scaffold00155 367037 1 C A scaffold7217 ScafM SNP 0042.scaffold00155 367044 1 G T scaffold7217 ScafM SNP 0042.scaffold00155 367079 1 A T scaffold7217 ScafM SNP 0042.scaffold00155 367173 1 A C scaffold7217 ScafM SNP 0042.scaffold00155 367176 1 T C scaffold7217 ScafM SNP 0042.scaffold00155 367182 1 T C scaffold7217 ScafM SNP 0042.scaffold00155 367230 1 C A scaffold7217 ScafM SNP 0042.scaffold00155 367251 1 A G scaffold7217 ScafM SNP 0042.scaffold00155 367262 1 C A scaffold7217 ScafM SNP 0042.scaffold00155 367464 1 T C scaffold25024 ScafM SNP 0042.scaffold00155 367495 1 T C scaffold25024 ScafM SNP 0042.scaffold00155 367503 1 C T scaffold25024 ScafM SNP 0042.scaffold00155 367520 1 A G scaffold25024 ScafM SNP 0042.scaffold00155 367579 1 A T scaffold25024 ScafM SNP 0042.scaffold00155 367654 1 A G scaffold25024 ScafM INDEL 0042.scaffold00155 367706 3 ... TTA scaffold25024 ScafM SNP 0042.scaffold00155 367715 1 A T scaffold25024 ScafM SNP 0042.scaffold00155 367760 1 A G scaffold25024 ScafM SNP 0042.scaffold00155 368086 1 T A scaffold599 ScafM SNP 0042.scaffold00155 368225 1 T C scaffold599 ScafM SNP 0042.scaffold00155 368253 1 C T scaffold599 ScafM INDEL 0042.scaffold00155 368318 1 . G scaffold599 ScafM SNP 0042.scaffold00155 368326 1 C T scaffold599 ScafM SNP 0042.scaffold00155 368344 1 T C scaffold599 ScafM SNP 0042.scaffold00155 382141 1 G A scaffold44339 ScafM SNP 0042.scaffold00155 382411 1 A C scaffold44339 ScafM SNP 0042.scaffold00155 384015 1 A G scaffold44339 ScafM SNP 0042.scaffold00155 385969 1 C G scaffold44339 ScafM SNP 0042.scaffold00155 386083 1 A T scaffold44339 ScafM SNP 0042.scaffold00155 386170 1 C T scaffold44339 ScafM SNP 0042.scaffold00155 399493 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 399845 1 T A scaffold19880 ScafM SNP 0042.scaffold00155 399884 1 A G scaffold19880 ScafM SNP 0042.scaffold00155 400451 1 A C scaffold19880 ScafM SNP 0042.scaffold00155 400643 1 C A scaffold19880 ScafM INDEL 0042.scaffold00155 400747 13 ............. ACATGGTGATACT scaffold19880 ScafM INDEL 0042.scaffold00155 400748 4 .... ATTT scaffold19880 ScafM SNP 0042.scaffold00155 400908 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 400973 1 T C scaffold19880 ScafM SNP 0042.scaffold00155 401075 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 402859 1 G A scaffold19880 ScafM INDEL 0042.scaffold00155 402989 3 AAA ... scaffold19880 ScafM INDEL 0042.scaffold00155 403350 1 T . scaffold19880 ScafM SNP 0042.scaffold00155 403448 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 405972 1 T G scaffold19880 ScafM SNP 0042.scaffold00155 406454 1 A G scaffold19880 ScafM SNP 0042.scaffold00155 406486 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 406585 1 A G scaffold19880 ScafM SNP 0042.scaffold00155 406682 1 T G scaffold19880 ScafM SNP 0042.scaffold00155 406750 1 A C scaffold19880 ScafM SNP 0042.scaffold00155 406804 1 G C scaffold19880 ScafM SNP 0042.scaffold00155 408073 1 T C scaffold19880 ScafM INDEL 0042.scaffold00155 408215 58 .......................................................... ATTGATGACTGCTTCTGTGATTGGAGATGGAGCTGGGTTTGATATGCCCCATGTATTG scaffold19880 ScafM SNP 0042.scaffold00155 408563 1 C T scaffold19880 ScafM SNP 0042.scaffold00155 410950 1 A G scaffold19900 ScafM SNP 0042.scaffold00155 410987 1 A T scaffold19900 ScafM SNP 0042.scaffold00155 419975 1 T C scaffold3477 ScafM INDEL 0042.scaffold00155 420044 14 ATTTTGAAAAAAAA .............. scaffold3477 ScafM SNP 0042.scaffold00155 420287 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 420311 1 T G scaffold3477 ScafM SNP 0042.scaffold00155 420580 1 A G scaffold3477 ScafM INDEL 0042.scaffold00155 435419 7 ....... GGGAAAT scaffold3477 ScafM SNP 0042.scaffold00155 435498 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 435554 1 G A scaffold3477 ScafM INDEL 0042.scaffold00155 435647 1 G . scaffold3477 ScafM SNP 0042.scaffold00155 435911 1 C T scaffold3477 ScafM SNP 0042.scaffold00155 437442 1 T C scaffold3477 ScafM SNP 0042.scaffold00155 439332 1 C T scaffold3477 ScafM INDEL 0042.scaffold00155 439529 1 . A scaffold3477 ScafM SNP 0042.scaffold00155 439653 1 T C scaffold3477 ScafM SNP 0042.scaffold00155 440040 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 440070 1 G T scaffold3477 ScafM SNP 0042.scaffold00155 440210 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 440237 1 C T scaffold3477 ScafM INDEL 0042.scaffold00155 440421 9 TGAATAAAC ......... scaffold3477 ScafM SNP 0042.scaffold00155 440432 1 T G scaffold3477 ScafM SNP 0042.scaffold00155 440530 1 G A scaffold3477 ReadM SNP 0042.scaffold00155 441309 1 A C - ScafM SNP 0042.scaffold00155 442674 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 443514 1 T C scaffold3477 ScafM SNP 0042.scaffold00155 443619 1 A C scaffold3477 ScafM SNP 0042.scaffold00155 447708 1 A G scaffold3477 ScafM SNP 0042.scaffold00155 447858 1 G A scaffold3477 ScafM SNP 0042.scaffold00155 448183 1 T C scaffold3477 ScafM SNP 0042.scaffold00155 448221 1 T C scaffold3477 ScafM SNP 0042.scaffold00155 448336 1 A G scaffold3477 ScafM SNP 0042.scaffold00155 448847 1 A C scaffold6618 ScafM SNP 0042.scaffold00155 448884 1 C A scaffold6618 ScafM SNP 0042.scaffold00155 448939 1 T C scaffold6618 ScafM SNP 0042.scaffold00155 448949 1 G A scaffold6618 ScafM SNP 0042.scaffold00155 448993 1 T C scaffold6618 ScafM SNP 0042.scaffold00155 452786 1 G A scaffold4533 ReadM SNP 0042.scaffold00155 453858 1 G A - ScafM SNP 0042.scaffold00155 454150 1 A T scaffold4533 ScafM SNP 0042.scaffold00155 454196 1 G C scaffold4533 ScafM SNP 0042.scaffold00155 458028 1 T C scaffold4533 ScafM INDEL 0042.scaffold00155 459780 2 .. TC scaffold4533 ScafM INDEL 0042.scaffold00155 460212 1 G . scaffold4533 ScafM SNP 0042.scaffold00155 460236 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 460322 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 460369 2 GT CG scaffold4533 ScafM SNP 0042.scaffold00155 460610 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 461814 1 G A scaffold4476 ScafM SNP 0042.scaffold00155 461820 1 T C scaffold4476 ScafM SNP 0042.scaffold00155 461842 1 G T scaffold4476 ScafM SNP 0042.scaffold00155 461866 1 A G scaffold4476 ScafM SNP 0042.scaffold00155 461883 1 G A scaffold4476 ScafM INDEL 0042.scaffold00155 461891 1 G . scaffold4476 ScafM INDEL 0042.scaffold00155 461893 2 CG .. scaffold4476 ScafM SNP 0042.scaffold00155 461903 1 A G scaffold4476 ScafM INDEL 0042.scaffold00155 461907 1 T . scaffold4476 ScafM SNP 0042.scaffold00155 461940 1 G T scaffold4476 ScafM SNP 0042.scaffold00155 461957 1 T G scaffold4476 ScafM INDEL 0042.scaffold00155 461977 7 ....... TCGTTCA scaffold4476 ScafM INDEL 0042.scaffold00155 461980 2 .. GC scaffold4476 ScafM SNP 0042.scaffold00155 461994 1 G A scaffold4476 ScafM SNP 0042.scaffold00155 462010 1 G A scaffold4476 ScafM SNP 0042.scaffold00155 462025 2 GA AG scaffold4476 ScafM SNP 0042.scaffold00155 462033 1 C T scaffold4476 ScafM SNP 0042.scaffold00155 462058 1 A G scaffold4476 ScafM SNP 0042.scaffold00155 462075 1 G A scaffold4476 ScafM SNP 0042.scaffold00155 462078 1 T C scaffold4476 ScafM SNP 0042.scaffold00155 462080 1 G C scaffold4476 ScafM SNP 0042.scaffold00155 462082 3 GCT ATC scaffold4476 ScafM SNP 0042.scaffold00155 462089 1 C A scaffold4476 ScafM INDEL 0042.scaffold00155 462091 2 TG .. scaffold4476 ScafM INDEL 0042.scaffold00155 462094 2 AC .. scaffold4476 ScafM INDEL 0042.scaffold00155 462100 5 GACGC ..... scaffold4476 ScafM SNP 0042.scaffold00155 462128 1 G C scaffold4476 ScafM SNP 0042.scaffold00155 463169 1 C A scaffold4533 ScafM INDEL 0042.scaffold00155 463354 8 ........ AATCAACA scaffold4533 ScafM SNP 0042.scaffold00155 463823 1 T A scaffold4533 ScafM SNP 0042.scaffold00155 465345 1 G A scaffold4533 ScafM INDEL 0042.scaffold00155 465941 1 T . scaffold4533 ScafM SNP 0042.scaffold00155 466656 1 T A scaffold4533 ScafM SNP 0042.scaffold00155 470540 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 470616 1 C A scaffold4533 ScafM SNP 0042.scaffold00155 471145 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 471518 1 G A scaffold4533 ScafM INDEL 0042.scaffold00155 472151 9 ......... ACATTCTGA scaffold4533 ScafM SNP 0042.scaffold00155 472882 1 A G scaffold4533 ScafM INDEL 0042.scaffold00155 472927 1 T . scaffold4533 ScafM SNP 0042.scaffold00155 473391 1 C T scaffold4533 ScafM INDEL 0042.scaffold00155 473876 11 ........... GCACTCTTTTT scaffold4533 ScafM INDEL 0042.scaffold00155 474051 1 . T scaffold4533 ScafM SNP 0042.scaffold00155 474148 1 A G scaffold4533 ScafM INDEL 0042.scaffold00155 474875 2 .. TA scaffold4533 ScafM SNP 0042.scaffold00155 475253 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 475382 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 475621 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 476115 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 476605 1 T G scaffold4533 ScafM SNP 0042.scaffold00155 476936 1 G C scaffold4533 ScafM INDEL 0042.scaffold00155 477313 1 . T scaffold4533 ScafM SNP 0042.scaffold00155 477346 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 477508 1 T G scaffold4533 ScafM SNP 0042.scaffold00155 478605 1 C G scaffold4533 ScafM SNP 0042.scaffold00155 478656 1 G A scaffold4533 ScafM INDEL 0042.scaffold00155 478958 1 C . scaffold4533 ScafM SNP 0042.scaffold00155 480150 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 480387 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 480705 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 480771 1 C T scaffold4533 ScafM INDEL 0042.scaffold00155 480926 1 A . scaffold4533 ScafM SNP 0042.scaffold00155 481182 1 T C scaffold4533 ScafM INDEL 0042.scaffold00155 481486 1 T . scaffold4533 ScafM SNP 0042.scaffold00155 482076 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 483061 1 T A scaffold4533 ScafM SNP 0042.scaffold00155 483111 1 C T scaffold4533 ScafM INDEL 0042.scaffold00155 483501 1 G . scaffold4533 ScafM SNP 0042.scaffold00155 484175 1 T G scaffold4533 ScafM SNP 0042.scaffold00155 484278 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 484312 1 G C scaffold4533 ScafM SNP 0042.scaffold00155 485954 1 G T scaffold4533 ScafM SNP 0042.scaffold00155 485978 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 486342 1 C T scaffold4533 ScafM INDEL 0042.scaffold00155 486508 3 ... AAA scaffold4533 ScafM SNP 0042.scaffold00155 486665 1 G A scaffold4533 ScafM SNP 0042.scaffold00155 487622 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 487652 1 G A scaffold4533 ScafM SNP 0042.scaffold00155 487775 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 487972 1 T C scaffold4533 ScafM SNP 0042.scaffold00155 488175 1 C T scaffold4533 ScafM SNP 0042.scaffold00155 488832 1 A G scaffold4533 ScafM SNP 0042.scaffold00155 488864 1 G A scaffold4533 ScafM SNP 0042.scaffold00155 515240 1 C A scaffold54196 ReadM SNP 0042.scaffold00155 516869 1 G A - ReadM SNP 0042.scaffold00155 518730 1 A G - ScafM SNP 0042.scaffold00155 521952 1 C G scaffold12398 ScafM SNP 0042.scaffold00155 522443 1 T A scaffold12398 ReadM SNP 0042.scaffold00155 524890 1 T C - ReadM SNP 0042.scaffold00155 538613 1 C T - ScafM SNP 0042.scaffold00155 542606 1 A G scaffold10440 ScafM SNP 0042.scaffold00155 542654 1 A G scaffold10440 ScafM SNP 0042.scaffold00155 542658 1 T C scaffold10440 ScafM SNP 0042.scaffold00155 542663 1 C G scaffold10440 ScafM SNP 0042.scaffold00155 542672 1 C T scaffold10440 ScafM SNP 0042.scaffold00155 542684 1 C T scaffold10440 ScafM SNP 0042.scaffold00155 542692 1 C T scaffold10440 ScafM SNP 0042.scaffold00155 542707 1 T A scaffold10440 ScafM SNP 0042.scaffold00155 542758 1 T C scaffold10440 ScafM SNP 0042.scaffold00155 542775 1 T C scaffold10440 ScafM SNP 0042.scaffold00155 542859 1 T A scaffold10440 ScafM SNP 0042.scaffold00155 542869 1 T C scaffold10440 ScafM SNP 0042.scaffold00155 542881 1 C T scaffold10440 ScafM INDEL 0042.scaffold00155 542883 1 T . scaffold10440 ScafM SNP 0042.scaffold00155 542900 1 C T scaffold10440 ScafM SNP 0042.scaffold00155 542966 1 G C scaffold5519 ScafM SNP 0042.scaffold00155 543045 1 C G scaffold5519 ScafM INDEL 0042.scaffold00155 543076 3 ... TAT scaffold5519 ScafM SNP 0042.scaffold00155 543170 1 G A scaffold5519 ScafM SNP 0042.scaffold00155 543209 1 A T scaffold5519 ScafM INDEL 0042.scaffold00155 543274 8 ........ TAAATATA scaffold5519 ScafM SNP 0042.scaffold00155 543305 1 G T scaffold5519 ScafM SNP 0042.scaffold00155 548790 1 C A scaffold2562 ScafM SNP 0042.scaffold00155 548819 1 C T scaffold2562 ScafM SNP 0042.scaffold00155 548827 1 G T scaffold2562 ScafM SNP 0042.scaffold00155 548855 1 G A scaffold2562 ScafM SNP 0042.scaffold00155 548867 1 G A scaffold2562 ScafM SNP 0042.scaffold00155 548910 1 G A scaffold2562 ScafM SNP 0042.scaffold00155 548920 1 C T scaffold2562 ScafM SNP 0042.scaffold00155 548931 1 G A scaffold2562 ScafM INDEL 0042.scaffold00155 548948 2 .. AT scaffold2562 ScafM INDEL 0042.scaffold00155 548968 2 .. TT scaffold2562 ScafM SNP 0042.scaffold00155 548977 1 T C scaffold2562 ScafM SNP 0042.scaffold00155 550863 1 C G scaffold66592 ScafM SNP 0042.scaffold00155 550999 2 AT GG scaffold66592 ScafM INDEL 0042.scaffold00155 551161 1 A . scaffold66592 ScafM SNP 0042.scaffold00155 551163 1 A G scaffold66592 ScafM SNP 0042.scaffold00155 551173 1 C A scaffold66592 ScafM SNP 0042.scaffold00155 551195 1 T C scaffold66592 ScafM SNP 0042.scaffold00155 551201 1 G A scaffold66592 ScafM SNP 0042.scaffold00155 551316 1 T C scaffold66592 ScafM SNP 0042.scaffold00155 551336 1 A G scaffold66592 ScafM SNP 0042.scaffold00155 551411 1 G T scaffold66592 ScafM SNP 0042.scaffold00155 551550 1 G T scaffold66592 ScafM SNP 0042.scaffold00155 551794 1 C T scaffold66592 ScafM SNP 0042.scaffold00155 551800 1 C T scaffold66592 ScafM SNP 0042.scaffold00155 554629 1 A C scaffold1072 ScafM SNP 0042.scaffold00155 554639 1 T A scaffold1072 ScafM SNP 0042.scaffold00155 554666 1 T A scaffold1072 ScafM SNP 0042.scaffold00155 554670 1 C T scaffold1072 ScafM INDEL 0042.scaffold00155 554676 1 . A scaffold1072 ScafM SNP 0042.scaffold00155 554692 1 A C scaffold1072 ScafM SNP 0042.scaffold00155 554715 1 A T scaffold1072 ScafM SNP 0042.scaffold00155 554723 1 A C scaffold1072 ScafM SNP 0042.scaffold00155 554741 1 A G scaffold1072 ScafM SNP 0042.scaffold00155 554763 1 C A scaffold1072 ScafM SNP 0042.scaffold00155 554792 1 T C scaffold1072 ScafM SNP 0042.scaffold00155 554799 1 A G scaffold1072 ScafM SNP 0042.scaffold00155 554807 1 G A scaffold1072 ScafM SNP 0042.scaffold00155 554810 1 C T scaffold1072 ScafM SNP 0042.scaffold00155 554814 1 A G scaffold1072 ScafM SNP 0042.scaffold00155 554824 1 C T scaffold1072 ScafM SNP 0042.scaffold00155 554833 1 A C scaffold1072 ScafM SNP 0042.scaffold00155 554847 1 A G scaffold1072 ScafM SNP 0042.scaffold00155 559919 1 A G scaffold55936 ScafM SNP 0042.scaffold00155 560099 1 C T scaffold55936 ScafM INDEL 0042.scaffold00155 575672 1 T . scaffold1832 ScafM SNP 0042.scaffold00155 576497 1 G A scaffold1832 ScafM SNP 0042.scaffold00155 576603 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 577130 2 AA GC scaffold1832 ScafM SNP 0042.scaffold00155 577295 1 G A scaffold1832 ScafM SNP 0042.scaffold00155 577980 1 C G scaffold1832 ScafM SNP 0042.scaffold00155 578068 1 C G scaffold1832 ScafM SNP 0042.scaffold00155 578090 1 G A scaffold1832 ScafM INDEL 0042.scaffold00155 578608 64 ................................................................ ACAAAAAAATATATGCACTAAAAAACAACTACCCATGTTATACTCTTTCACGGTACTACAGTAA scaffold1832 ScafM SNP 0042.scaffold00155 578722 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 578740 1 G C scaffold1832 ScafM INDEL 0042.scaffold00155 578845 2 AT .. scaffold1832 ScafM SNP 0042.scaffold00155 578991 1 C T scaffold1832 ScafM SNP 0042.scaffold00155 579014 1 A T scaffold1832 ScafM SNP 0042.scaffold00155 579068 1 C T scaffold1832 ScafM SNP 0042.scaffold00155 579092 1 T A scaffold1832 ScafM INDEL 0042.scaffold00155 579784 2 AT .C scaffold1832 ScafM SNP 0042.scaffold00155 579787 1 C A scaffold1832 ScafM SNP 0042.scaffold00155 579899 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 580060 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 580139 1 C T scaffold1832 ScafM SNP 0042.scaffold00155 580774 1 G A scaffold1832 ScafM SNP 0042.scaffold00155 580868 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 580876 1 A T scaffold1832 ScafM SNP 0042.scaffold00155 581497 1 C T scaffold1832 ScafM SNP 0042.scaffold00155 581779 1 T G scaffold1832 ScafM SNP 0042.scaffold00155 582105 1 A G scaffold1832 ScafM SNP 0042.scaffold00155 582815 1 C G scaffold1832 ScafM INDEL 0042.scaffold00155 583069 1 . A scaffold1832 ScafM SNP 0042.scaffold00155 583090 1 A C scaffold1832 ScafM SNP 0042.scaffold00155 583095 1 A C scaffold1832 ScafM SNP 0042.scaffold00155 584696 1 A G scaffold8722 ScafM SNP 0042.scaffold00155 584704 1 C T scaffold8722 ScafM SNP 0042.scaffold00155 584710 1 G A scaffold8722 ScafM SNP 0042.scaffold00155 584739 1 C T scaffold8722 ScafM SNP 0042.scaffold00155 584743 1 T G scaffold8722 ScafM SNP 0042.scaffold00155 584809 1 T A scaffold8722 ScafM SNP 0042.scaffold00155 584891 1 T C scaffold8722 ScafM SNP 0042.scaffold00155 584914 1 G A scaffold8722 ScafM SNP 0042.scaffold00155 584998 1 T G scaffold8722 ScafM SNP 0042.scaffold00155 585031 1 T C scaffold8722 ScafM INDEL 0042.scaffold00155 585068 2 .C AA scaffold8722 ScafM SNP 0042.scaffold00155 585080 1 C T scaffold8722 ScafM SNP 0042.scaffold00155 585156 1 T A scaffold8722 ScafM SNP 0042.scaffold00155 585160 1 A G scaffold8722 ScafM SNP 0042.scaffold00155 585212 1 A T scaffold8722 ScafM SNP 0042.scaffold00155 585271 2 GT AC scaffold8722 ScafM SNP 0042.scaffold00155 585274 1 G A scaffold8722 ScafM SNP 0042.scaffold00155 585299 1 A T scaffold8722 ScafM SNP 0042.scaffold00155 585316 1 G A scaffold8722 ScafM SNP 0042.scaffold00155 585347 1 C A scaffold8722 ScafM INDEL 0042.scaffold00155 585357 3 CAA ... scaffold8722 ScafM SNP 0042.scaffold00155 585381 1 A G scaffold8722 ScafM SNP 0042.scaffold00155 585424 1 A G scaffold8722 ScafM SNP 0042.scaffold00155 585450 1 A T scaffold8722 ScafM SNP 0042.scaffold00155 585756 1 T A scaffold19577 ScafM SNP 0042.scaffold00155 585807 1 A T scaffold19577 ScafM SNP 0042.scaffold00155 585821 1 A G scaffold19577 ScafM SNP 0042.scaffold00155 585839 1 G C scaffold19577 ScafM SNP 0042.scaffold00155 585847 1 C A scaffold19577 ScafM SNP 0042.scaffold00155 585849 1 A G scaffold19577 ScafM SNP 0042.scaffold00155 585927 1 G A scaffold19577 ScafM SNP 0042.scaffold00155 586518 1 T A scaffold1832 ScafM SNP 0042.scaffold00155 586670 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 586707 1 A G scaffold1832 ScafM SNP 0042.scaffold00155 586748 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 586756 1 A G scaffold1832 ScafM SNP 0042.scaffold00155 586763 1 C T scaffold1832 ScafM SNP 0042.scaffold00155 586775 1 A G scaffold1832 ScafM SNP 0042.scaffold00155 586788 1 T C scaffold1832 ScafM SNP 0042.scaffold00155 588371 1 A G scaffold628 ScafM SNP 0042.scaffold00155 588378 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588384 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588387 2 AA CG scaffold628 ScafM SNP 0042.scaffold00155 588390 1 A C scaffold628 ScafM SNP 0042.scaffold00155 588399 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588410 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588414 1 A T scaffold628 ScafM SNP 0042.scaffold00155 588426 1 G T scaffold628 ScafM SNP 0042.scaffold00155 588434 1 A G scaffold628 ScafM SNP 0042.scaffold00155 588436 1 C A scaffold628 ScafM SNP 0042.scaffold00155 588445 1 A G scaffold628 ScafM SNP 0042.scaffold00155 588463 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588469 2 TT CC scaffold628 ScafM SNP 0042.scaffold00155 588473 1 C T scaffold628 ScafM SNP 0042.scaffold00155 588483 1 A G scaffold628 ScafM SNP 0042.scaffold00155 588491 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588510 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588512 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588517 2 TG GA scaffold628 ScafM SNP 0042.scaffold00155 588522 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588540 1 T G scaffold628 ScafM SNP 0042.scaffold00155 588543 1 G C scaffold628 ScafM INDEL 0042.scaffold00155 588554 1 . T scaffold628 ScafM SNP 0042.scaffold00155 588559 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588585 4 CATT AGAA scaffold628 ScafM INDEL 0042.scaffold00155 588593 1 T . scaffold628 ScafM INDEL 0042.scaffold00155 588598 4 ACAA ...T scaffold628 ScafM INDEL 0042.scaffold00155 588604 1 T . scaffold628 ScafM SNP 0042.scaffold00155 588612 1 T A scaffold628 ScafM INDEL 0042.scaffold00155 588616 1 T . scaffold628 ScafM INDEL 0042.scaffold00155 588624 1 A . scaffold628 ScafM INDEL 0042.scaffold00155 588626 3 AAT ... scaffold628 ScafM SNP 0042.scaffold00155 588635 1 C T scaffold628 ScafM INDEL 0042.scaffold00155 588640 2 TG .. scaffold628 ScafM SNP 0042.scaffold00155 588643 1 G T scaffold628 ScafM SNP 0042.scaffold00155 588645 1 C A scaffold628 ScafM INDEL 0042.scaffold00155 588650 2 .. CC scaffold628 ScafM SNP 0042.scaffold00155 588652 2 TC AG scaffold628 ScafM SNP 0042.scaffold00155 588655 1 C T scaffold628 ScafM INDEL 0042.scaffold00155 588657 2 .T AC scaffold628 ScafM SNP 0042.scaffold00155 588662 1 A G scaffold628 ScafM SNP 0042.scaffold00155 588679 1 C T scaffold628 ScafM INDEL 0042.scaffold00155 588757 1 T . scaffold628 ScafM INDEL 0042.scaffold00155 588775 4 .... ATAT scaffold628 ScafM SNP 0042.scaffold00155 588795 1 C T scaffold628 ScafM SNP 0042.scaffold00155 588797 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588821 1 A T scaffold628 ScafM INDEL 0042.scaffold00155 588838 1 C . scaffold628 ScafM SNP 0042.scaffold00155 588840 1 G C scaffold628 ScafM SNP 0042.scaffold00155 588846 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588853 1 T G scaffold628 ScafM SNP 0042.scaffold00155 588878 1 C T scaffold628 ScafM SNP 0042.scaffold00155 588881 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588895 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588907 1 C T scaffold628 ScafM SNP 0042.scaffold00155 588914 1 T C scaffold628 ScafM INDEL 0042.scaffold00155 588944 4 GCGA .... scaffold628 ScafM SNP 0042.scaffold00155 588954 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588969 1 T C scaffold628 ScafM SNP 0042.scaffold00155 588981 1 G A scaffold628 ScafM SNP 0042.scaffold00155 588992 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589002 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589024 4 AAAC CGGT scaffold628 ScafM SNP 0042.scaffold00155 589029 1 T A scaffold628 ScafM SNP 0042.scaffold00155 589033 1 T A scaffold628 ScafM SNP 0042.scaffold00155 589047 2 TT CA scaffold628 ScafM SNP 0042.scaffold00155 589050 2 CG GA scaffold628 ScafM SNP 0042.scaffold00155 589056 1 C T scaffold628 ScafM SNP 0042.scaffold00155 589064 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589071 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589089 1 C A scaffold628 ScafM SNP 0042.scaffold00155 589096 1 G T scaffold628 ScafM SNP 0042.scaffold00155 589104 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589108 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589131 1 T C scaffold628 ScafM SNP 0042.scaffold00155 589133 1 A C scaffold628 ReadM SNP 0042.scaffold00155 609463 1 T C - ScafM SNP 0042.scaffold00155 618672 1 C T scaffold27453 ScafM SNP 0042.scaffold00155 618736 1 C T scaffold27453 ScafM INDEL 0042.scaffold00155 619521 32 ................................ GGAAAGTACCCTGTAATTTTATAATCTGAGAT scaffold15795 ScafM INDEL 0042.scaffold00155 619605 1 . A scaffold15795 ScafM SNP 0042.scaffold00155 619824 2 AT GC scaffold15795 ScafM SNP 0042.scaffold00155 619970 2 CT TC scaffold15795 ScafM SNP 0042.scaffold00155 619988 1 G A scaffold15795 ScafM SNP 0042.scaffold00155 619996 1 T A scaffold15795 ScafM SNP 0042.scaffold00155 620019 1 A T scaffold15795 ScafM INDEL 0042.scaffold00155 620047 33 ................................. GGGGCACACGGTCCGCACATTGACCACCCTCGG scaffold15795 ScafM SNP 0042.scaffold00155 620066 1 T C scaffold15795 ScafM SNP 0042.scaffold00155 620115 1 C T scaffold15795 ScafM INDEL 0042.scaffold00155 620138 1 . G scaffold15795 ScafM INDEL 0042.scaffold00155 620283 1 G . scaffold54553 ScafM INDEL 0042.scaffold00155 620320 1 T . scaffold54553 ScafM INDEL 0042.scaffold00155 620738 8 TGCGTGCT ........ scaffold24022 ScafM INDEL 0042.scaffold00155 621361 27 ........................... CTGTTAAAGCATATTACAGGCTGACTA scaffold24022 ScafM SNP 0042.scaffold00155 621937 1 G T scaffold24021 ScafM SNP 0042.scaffold00155 621942 1 T C scaffold24021 ScafM SNP 0042.scaffold00155 621951 1 G A scaffold24021 ScafM SNP 0042.scaffold00155 622011 1 T A scaffold24021 ScafM SNP 0042.scaffold00155 622057 1 T C scaffold24021 ScafM INDEL 0042.scaffold00155 622178 1 T . scaffold24021 ScafM SNP 0042.scaffold00155 622278 1 T C scaffold24021 ScafM SNP 0042.scaffold00155 622310 1 A G scaffold24021 ScafM SNP 0042.scaffold00155 622374 1 T C scaffold24021 ScafM SNP 0042.scaffold00155 622621 1 C T scaffold24021 ScafM SNP 0042.scaffold00155 622937 1 G A scaffold24021 ScafM INDEL 0042.scaffold00155 623139 2 .. TT scaffold24021 ScafM INDEL 0042.scaffold00155 623475 40 ........................................ AGCTATGCAGACCAACTTTTTAAATGTTCTGTTATTTGTT scaffold24021 ScafM SNP 0042.scaffold00155 623755 1 G A scaffold24021 ScafM SNP 0042.scaffold00155 623922 1 T C scaffold24021 ScafM INDEL 0042.scaffold00155 624244 6 GCGGGG ...... scaffold24021 ScafM SNP 0042.scaffold00155 624681 1 A C scaffold24021 ScafM SNP 0042.scaffold00155 624914 1 T A scaffold24021 ScafM SNP 0042.scaffold00155 625328 1 C T scaffold24021 ScafM SNP 0042.scaffold00155 625532 1 G T scaffold24021 ScafM SNP 0042.scaffold00155 625860 1 G A scaffold24021 ScafM SNP 0042.scaffold00155 626485 1 G A scaffold24021 ScafM SNP 0042.scaffold00155 626631 1 A T scaffold24021 ScafM SNP 0042.scaffold00155 626710 1 A C scaffold24021 ScafM SNP 0042.scaffold00155 626985 1 C T scaffold24021 ScafM SNP 0042.scaffold00155 627108 1 G C scaffold24021 ScafM SNP 0042.scaffold00155 627125 1 T C scaffold24021 ScafM SNP 0042.scaffold00155 628035 1 G A scaffold24021 ScafM INDEL 0042.scaffold00155 628365 1 T . scaffold24021 ScafM SNP 0042.scaffold00155 628779 1 A T scaffold24021 ScafM SNP 0042.scaffold00155 629079 1 C A scaffold24021 ScafM SNP 0042.scaffold00155 629874 1 C A scaffold24021 ScafM SNP 0042.scaffold00155 630031 1 T G scaffold24021 ScafM SNP 0042.scaffold00155 630913 1 T A scaffold24021 ScafM SNP 0042.scaffold00155 632024 1 T C scaffold24021 ScafM SNP 0042.scaffold00155 633921 1 A G scaffold65828 ScafM SNP 0042.scaffold00155 633960 1 G A scaffold65828 ScafM INDEL 0042.scaffold00155 633997 1 T . scaffold65828 ScafM SNP 0042.scaffold00155 634018 1 A G scaffold65828 ScafM SNP 0042.scaffold00155 634032 2 AT GC scaffold65828 ScafM SNP 0042.scaffold00155 635315 1 G C C19707307 ScafM SNP 0042.scaffold00155 635609 1 C T C19707307 ScafM SNP 0042.scaffold00155 635962 1 G C C19707307 ScafM SNP 0042.scaffold00155 636102 1 G A C19707307 ScafM SNP 0042.scaffold00155 637268 1 G T C19653713 ScafM SNP 0042.scaffold00155 637427 1 G T C19653713 ScafM SNP 0042.scaffold00155 637555 1 A G C19653713 ScafM SNP 0042.scaffold00155 637564 1 G T C19653713 ScafM SNP 0042.scaffold00155 638238 1 G A scaffold37110 ScafM SNP 0042.scaffold00155 638317 1 C G scaffold37110 ScafM INDEL 0042.scaffold00155 638554 6 GGGGGG ...... scaffold37110 ScafM INDEL 0042.scaffold00155 638673 12 ............ TAATTTTACACA scaffold37110 ScafM INDEL 0042.scaffold00155 638715 1 . A scaffold37110 ScafM SNP 0042.scaffold00155 647811 1 G T scaffold19131 ScafM SNP 0042.scaffold00155 647840 1 T C scaffold19131 ScafM SNP 0042.scaffold00155 647946 1 T C scaffold19131 ScafM SNP 0042.scaffold00155 648015 1 C A scaffold19131 ScafM SNP 0042.scaffold00155 650044 1 C T scaffold19131 ScafM SNP 0042.scaffold00155 650487 2 AT TA scaffold19131 ScafM SNP 0042.scaffold00155 650676 1 T C scaffold19131 ScafM SNP 0042.scaffold00155 650922 1 T C scaffold19131 ScafM INDEL 0042.scaffold00155 686083 7 AATTCCG ....... scaffold55872 ScafM SNP 0042.scaffold00155 686127 1 T C scaffold55872 ScafM SNP 0042.scaffold00155 686177 1 C A scaffold55872 ScafM SNP 0042.scaffold00155 686183 1 C A scaffold55872 ScafM INDEL 0042.scaffold00155 686517 37 GACAACTGAATATGGTGTTTATTGTTTTTCCGTTTTC ..................................... scaffold55872 ScafM INDEL 0042.scaffold00155 686556 1 T . scaffold55872 ScafM INDEL 0042.scaffold00155 686560 4 ACAA .... scaffold55872 ScafM INDEL 0042.scaffold00155 686652 4 ATTA .... scaffold55872 ScafM SNP 0042.scaffold00155 686836 1 G C scaffold55872 ScafM SNP 0042.scaffold00155 686897 1 G A scaffold55872 ScafM SNP 0042.scaffold00155 687799 1 C T scaffold52785 ScafM INDEL 0042.scaffold00155 687965 5 CAACA ..... scaffold52785 ScafM INDEL 0042.scaffold00155 692613 1 . A scaffold59764 ScafM INDEL 0042.scaffold00155 692650 1 . G scaffold59764 ScafM SNP 0042.scaffold00155 692776 1 C T scaffold59764 ScafM SNP 0042.scaffold00155 692790 1 C G scaffold59764 ScafM SNP 0042.scaffold00155 692828 1 A G scaffold59764 ScafM SNP 0042.scaffold00155 692868 1 G T scaffold59764 ScafM SNP 0042.scaffold00155 692966 1 T C scaffold59764 ScafM INDEL 0042.scaffold00155 693003 3 TTT ... scaffold59764 ScafM SNP 0042.scaffold00155 693007 1 T G scaffold59764 ScafM INDEL 0042.scaffold00155 693372 1 . A scaffold59764 ScafM SNP 0042.scaffold00155 693483 1 T C scaffold59764 ScafM INDEL 0042.scaffold00155 693514 2 TC .. scaffold59764 ScafM SNP 0042.scaffold00155 693797 1 C T scaffold59764 ScafM SNP 0042.scaffold00155 693858 1 T C scaffold59764 ScafM SNP 0042.scaffold00155 693891 1 G A scaffold59764 ScafM INDEL 0042.scaffold00155 693935 4 .... GGAT scaffold59764 ScafM SNP 0042.scaffold00155 693937 1 G A scaffold59764 ScafM SNP 0042.scaffold00155 694122 1 T C scaffold59764 ScafM SNP 0042.scaffold00155 694165 1 T C scaffold59764 ScafM SNP 0042.scaffold00155 695916 1 G A scaffold44705 ScafM SNP 0042.scaffold00155 695943 1 A C scaffold44705 ScafM SNP 0042.scaffold00155 696001 1 T A scaffold44705 ScafM SNP 0042.scaffold00155 701991 1 G A scaffold41133 ScafM SNP 0042.scaffold00155 702033 1 G C scaffold41133 ScafM SNP 0042.scaffold00155 702052 1 G A scaffold41133 ScafM SNP 0042.scaffold00155 702082 1 T C scaffold41133 ScafM SNP 0042.scaffold00155 702138 1 A G scaffold41133 ScafM SNP 0042.scaffold00155 702155 1 T G scaffold41133 ScafM SNP 0042.scaffold00155 702273 1 G C scaffold41133 ScafM SNP 0042.scaffold00155 702317 1 G T scaffold41133 ScafM INDEL 0042.scaffold00155 702455 1 T . scaffold41133 ScafM INDEL 0042.scaffold00155 702515 4 .... ATAT scaffold41133 ScafM INDEL 0042.scaffold00155 702585 3 ATT ... scaffold41133 ScafM SNP 0042.scaffold00155 702634 1 T C scaffold41133 ScafM SNP 0042.scaffold00155 702732 1 C A scaffold41133 ScafM SNP 0042.scaffold00155 702845 1 A G scaffold41133 ScafM SNP 0042.scaffold00155 703327 1 A C scaffold41133 ScafM SNP 0042.scaffold00155 703359 1 T A scaffold41133 ScafM SNP 0042.scaffold00155 704759 1 A T C19752765 ScafM SNP 0042.scaffold00155 704786 1 T A C19752765 ScafM SNP 0042.scaffold00155 704867 2 AG TA C19752765 ScafM INDEL 0042.scaffold00155 705052 1 . G C19752765 ScafM SNP 0042.scaffold00155 705055 1 T A C19752765 ScafM SNP 0042.scaffold00155 705248 1 A G C19752765 ScafM SNP 0042.scaffold00155 705420 1 G T C19752765 ScafM SNP 0042.scaffold00155 705519 1 T G C19752765 ScafM SNP 0042.scaffold00155 705545 1 A G C19752765 ScafM SNP 0042.scaffold00155 705599 1 A C C19752765 ScafM SNP 0042.scaffold00155 705749 1 A G C19752765 ScafM SNP 0042.scaffold00155 706206 1 G A C19752765 ScafM SNP 0042.scaffold00155 706423 1 T A C19752765 ScafM SNP 0042.scaffold00155 706455 1 G A C19752765 ScafM SNP 0042.scaffold00155 706548 1 A G C19752765 ScafM SNP 0042.scaffold00155 706600 1 A T C19752765 ScafM SNP 0042.scaffold00155 706614 1 A C C19752765 ScafM SNP 0042.scaffold00155 706717 1 T C C19752765 ScafM SNP 0042.scaffold00155 706777 1 A G C19752765 ScafM SNP 0042.scaffold00155 713669 1 G A scaffold32353 ScafM SNP 0042.scaffold00155 713696 1 T C scaffold32353 ScafM SNP 0042.scaffold00155 713891 1 T C scaffold32353 ScafM SNP 0042.scaffold00155 713981 1 A C scaffold32353 ScafM SNP 0042.scaffold00155 713989 1 G T scaffold32353 ScafM SNP 0042.scaffold00155 714001 1 A T scaffold32353 ScafM INDEL 0042.scaffold00155 714055 5 CGGTG ..... scaffold32353 ScafM SNP 0042.scaffold00155 714229 1 T G scaffold32353 ScafM SNP 0042.scaffold00155 714272 1 G A scaffold32353 ScafM SNP 0042.scaffold00155 714288 1 A G scaffold32353 ScafM SNP 0042.scaffold00155 714429 1 A C scaffold32353 ScafM SNP 0042.scaffold00155 714439 1 A G scaffold32353 ScafM SNP 0042.scaffold00155 714448 1 G A scaffold32353 ScafM SNP 0042.scaffold00155 714475 1 T G scaffold32353 ScafM SNP 0042.scaffold00155 721730 1 A C scaffold4534 ScafM SNP 0042.scaffold00155 721754 1 A G scaffold4534 ScafM SNP 0042.scaffold00155 732764 1 T C scaffold12630 ScafM SNP 0042.scaffold00155 734351 1 G A scaffold12630 ScafM SNP 0042.scaffold00155 740770 1 T A scaffold12630 ScafM INDEL 0042.scaffold00155 740782 2 .. TT scaffold12630 ScafM SNP 0042.scaffold00155 740783 1 G T scaffold12630 ScafM SNP 0042.scaffold00155 740788 1 C T scaffold12630 ScafM SNP 0042.scaffold00155 740793 1 A T scaffold12630 ScafM INDEL 0042.scaffold00155 740836 1 . A scaffold12630 ScafM SNP 0042.scaffold00155 751663 1 G C scaffold4678 ScafM SNP 0042.scaffold00155 751687 1 G A scaffold4678 ScafM SNP 0042.scaffold00155 751705 1 T C scaffold4678 ScafM SNP 0042.scaffold00155 751717 1 G T scaffold4678 ScafM SNP 0042.scaffold00155 751809 1 T G scaffold4678 ScafM SNP 0042.scaffold00155 751852 1 T C scaffold4678 ScafM SNP 0042.scaffold00155 751912 1 G A scaffold4678 ScafM SNP 0042.scaffold00155 751930 1 T A scaffold4678 ScafM SNP 0042.scaffold00155 751957 1 C T scaffold4678 ScafM SNP 0042.scaffold00155 751984 1 T C scaffold4678 ScafM SNP 0042.scaffold00155 751998 1 G A scaffold4678 ScafM SNP 0042.scaffold00155 752015 1 T C scaffold4678 ScafM INDEL 0042.scaffold00155 752019 1 . T scaffold4678 ScafM SNP 0042.scaffold00155 752030 1 C T scaffold4678 ScafM SNP 0042.scaffold00155 752048 1 C A scaffold4678 ScafM INDEL 0042.scaffold00155 752064 1 T . scaffold4678 ScafM SNP 0042.scaffold00155 752066 1 T A scaffold4678 ScafM INDEL 0042.scaffold00155 752084 1 . T scaffold4678 ScafM SNP 0042.scaffold00155 752097 1 C T scaffold4678 ScafM SNP 0042.scaffold00155 752654 1 A G scaffold20374 ScafM SNP 0042.scaffold00155 752659 1 C T scaffold20374 ScafM SNP 0042.scaffold00155 752665 1 G A scaffold20374 ScafM SNP 0042.scaffold00155 752732 1 C G scaffold20374 ScafM SNP 0042.scaffold00155 752921 1 T A scaffold20374 ScafM SNP 0042.scaffold00155 752929 1 C A scaffold20374 ScafM SNP 0042.scaffold00155 752959 1 G C scaffold20374 ScafM SNP 0042.scaffold00155 753067 1 G A scaffold20374 ScafM SNP 0042.scaffold00155 753183 1 T C scaffold20374 ScafM SNP 0042.scaffold00155 753278 1 C T scaffold20374 ScafM SNP 0042.scaffold00155 753409 1 A G scaffold20374 ScafM SNP 0042.scaffold00155 753535 1 T C scaffold20374 ScafM INDEL 0042.scaffold00155 753584 1 C . scaffold20374 ScafM SNP 0042.scaffold00155 753589 1 C T scaffold20374 ScafM SNP 0042.scaffold00155 753686 1 C T scaffold20374 ScafM SNP 0042.scaffold00155 753729 1 G C scaffold20374 ScafM SNP 0042.scaffold00155 753853 1 A C scaffold6623 ScafM SNP 0042.scaffold00155 753868 1 T G scaffold6623 ScafM SNP 0042.scaffold00155 753899 1 C A scaffold6623 ScafM SNP 0042.scaffold00155 753912 2 CC TT scaffold6623 ScafM SNP 0042.scaffold00155 754012 1 A G scaffold6623 ScafM SNP 0042.scaffold00155 754067 1 T C scaffold6623 ScafM SNP 0042.scaffold00155 754093 1 T G scaffold6623 ScafM SNP 0042.scaffold00155 754103 1 T C scaffold6623 ScafM INDEL 0042.scaffold00155 754134 1 . T scaffold6623 ScafM INDEL 0042.scaffold00155 754136 1 . T scaffold6623 ScafM SNP 0042.scaffold00155 754152 1 T G scaffold6623 ScafM SNP 0042.scaffold00155 754584 1 A G scaffold9164 ScafM SNP 0042.scaffold00155 754594 2 TT CC scaffold9164 ScafM SNP 0042.scaffold00155 754619 1 T A scaffold9164 ScafM SNP 0042.scaffold00155 754777 1 T G scaffold9164 ScafM SNP 0042.scaffold00155 754792 1 A G scaffold9164 ScafM SNP 0042.scaffold00155 754840 1 C G scaffold9164 ScafM SNP 0042.scaffold00155 754923 1 C A scaffold9164 ScafM SNP 0042.scaffold00155 754940 1 A G scaffold9164 ScafM SNP 0042.scaffold00155 754962 1 G T scaffold9164 ScafM SNP 0042.scaffold00155 755034 1 A C scaffold9176 ScafM SNP 0042.scaffold00155 755036 1 T A scaffold9176 ScafM SNP 0042.scaffold00155 755057 1 G T scaffold9176 ScafM SNP 0042.scaffold00155 755078 1 G C scaffold9176 ScafM SNP 0042.scaffold00155 755086 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 755150 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 755282 1 A G scaffold9176 ScafM INDEL 0042.scaffold00155 755291 1 . T scaffold9176 ScafM SNP 0042.scaffold00155 755325 1 G A scaffold9176 ScafM SNP 0042.scaffold00155 755333 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 755367 1 T C scaffold9176 ScafM SNP 0042.scaffold00155 755381 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 755493 1 T A scaffold9176 ScafM SNP 0042.scaffold00155 755623 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 755721 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 755740 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 755887 1 T C scaffold9176 ScafM INDEL 0042.scaffold00155 755910 3 TTG ... scaffold9176 ScafM SNP 0042.scaffold00155 755937 1 A C scaffold9176 ScafM SNP 0042.scaffold00155 756008 1 A T scaffold9176 ScafM SNP 0042.scaffold00155 756016 1 G A scaffold9176 ScafM INDEL 0042.scaffold00155 756042 5 ..... TTTTT scaffold9176 ScafM SNP 0042.scaffold00155 756043 1 C T scaffold9176 ScafM INDEL 0042.scaffold00155 756085 3 ... TAT scaffold9176 ScafM SNP 0042.scaffold00155 756113 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 756127 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756154 1 T C scaffold9176 ScafM SNP 0042.scaffold00155 756237 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756262 1 A T scaffold9176 ScafM SNP 0042.scaffold00155 756377 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 756385 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756404 1 T C scaffold9176 ScafM SNP 0042.scaffold00155 756478 1 G T scaffold9176 ScafM SNP 0042.scaffold00155 756512 2 TG AA scaffold9176 ScafM INDEL 0042.scaffold00155 756528 3 ... GAT scaffold9176 ScafM INDEL 0042.scaffold00155 756529 1 . T scaffold9176 ScafM SNP 0042.scaffold00155 756550 1 G A scaffold9176 ScafM SNP 0042.scaffold00155 756559 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756590 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 756594 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 756615 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756690 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 756714 1 T C scaffold9176 ScafM SNP 0042.scaffold00155 756783 1 A G scaffold9176 ScafM INDEL 0042.scaffold00155 756795 8 ........ CTAGAAGG scaffold9176 ScafM SNP 0042.scaffold00155 756860 1 T C scaffold9176 ScafM SNP 0042.scaffold00155 756888 1 G T scaffold9176 ScafM SNP 0042.scaffold00155 756953 1 C T scaffold9176 ScafM SNP 0042.scaffold00155 756964 1 C A scaffold9176 ScafM SNP 0042.scaffold00155 757021 1 T A scaffold9176 ScafM SNP 0042.scaffold00155 757030 1 T G scaffold9176 ScafM INDEL 0042.scaffold00155 757088 12 TCGTCATCATCG ............ scaffold9176 ScafM SNP 0042.scaffold00155 757157 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 757175 1 T A scaffold9176 ScafM SNP 0042.scaffold00155 757207 1 A G scaffold9176 ScafM SNP 0042.scaffold00155 757713 1 C T scaffold2748 ReadM INDEL 0042.scaffold00155 776547 1 . A - ScafM SNP 0042.scaffold00155 777429 1 C T scaffold47196 ScafM SNP 0042.scaffold00155 777463 1 T C scaffold47196 ScafM INDEL 0042.scaffold00155 777464 2 .. AA scaffold47196 ScafM SNP 0042.scaffold00155 777478 1 C A scaffold47196 ScafM SNP 0042.scaffold00155 777512 1 T C scaffold47196 ScafM SNP 0042.scaffold00155 777565 1 G T scaffold47196 ScafM INDEL 0042.scaffold00155 777584 1 T . scaffold47196 ScafM SNP 0042.scaffold00155 777610 1 G T scaffold47196 ScafM SNP 0042.scaffold00155 777808 1 G A scaffold47196 ScafM SNP 0042.scaffold00155 777840 1 A G scaffold47196 ScafM SNP 0042.scaffold00155 778116 1 G C scaffold47196 ScafM SNP 0042.scaffold00155 778165 1 C T scaffold47196 ScafM SNP 0042.scaffold00155 778172 1 T G scaffold47196 ScafM SNP 0042.scaffold00155 778175 2 AA CT scaffold47196 ScafM INDEL 0042.scaffold00155 778178 2 .G AA scaffold47196 ScafM SNP 0042.scaffold00155 778181 1 C T scaffold47196 ScafM INDEL 0042.scaffold00155 778223 4 AGAC .... scaffold47196 ScafM SNP 0042.scaffold00155 779430 1 C T C19719751 ScafM SNP 0042.scaffold00155 779487 1 A G C19719751 ScafM SNP 0042.scaffold00155 780009 1 C T C19719751 ScafM INDEL 0042.scaffold00155 780557 1 C . C19719751 ScafM SNP 0042.scaffold00155 780775 1 T C C19719751 ScafM SNP 0042.scaffold00155 780838 1 T C C19719751 ScafM SNP 0042.scaffold00155 780851 1 A G C19719751 ScafM SNP 0042.scaffold00155 780887 1 G A C19719751 ScafM INDEL 0042.scaffold00155 780933 1 . G C19719751 ScafM INDEL 0042.scaffold00155 787517 1 . C C19665667 ScafM SNP 0042.scaffold00155 787719 1 G A C19665667 ScafM SNP 0042.scaffold00155 787729 1 A G C19665667 ScafM SNP 0042.scaffold00155 787889 1 T C C19665667 ScafM SNP 0042.scaffold00155 787891 1 T C C19665667 ScafM SNP 0042.scaffold00155 788263 1 C T C19665667 ScafM SNP 0042.scaffold00155 788309 1 A G C19665667 ScafM SNP 0042.scaffold00155 788368 1 T C C19665667 ScafM SNP 0042.scaffold00155 789443 1 C T scaffold13036 ScafM SNP 0042.scaffold00155 789530 1 G T scaffold13036 ScafM SNP 0042.scaffold00155 789712 1 C T scaffold13036 ScafM SNP 0042.scaffold00155 790525 1 A T scaffold13036 ScafM SNP 0042.scaffold00155 790559 1 C T scaffold13036 ScafM SNP 0042.scaffold00155 790776 1 C T scaffold13036 ScafM SNP 0042.scaffold00155 790843 1 T C scaffold13036 ScafM SNP 0042.scaffold00155 791291 1 G A scaffold13036 ScafM INDEL 0042.scaffold00155 796430 1 A . scaffold13036 ScafM SNP 0042.scaffold00155 796642 1 G A scaffold13036 ScafM SNP 0042.scaffold00155 797208 1 A G scaffold13036 ScafM SNP 0042.scaffold00155 797303 1 T A scaffold13036 ScafM SNP 0042.scaffold00155 797600 1 G A scaffold13036 ScafM SNP 0042.scaffold00155 797964 1 T C scaffold13036 ScafM INDEL 0042.scaffold00155 798201 4 AAGA .... scaffold13036 ScafM SNP 0042.scaffold00155 798390 1 T C scaffold13036 ScafM SNP 0042.scaffold00155 798509 1 C T scaffold13036 ScafM SNP 0042.scaffold00155 798618 1 T C scaffold13036 ScafM SNP 0042.scaffold00155 798910 1 G A scaffold13036 ScafM SNP 0042.scaffold00155 798948 1 C A scaffold13036 ScafM SNP 0042.scaffold00155 799120 1 T C scaffold13036 ScafM INDEL 0042.scaffold00155 799538 1 . T scaffold13036 ScafM SNP 0042.scaffold00155 799590 1 G T scaffold13036 ScafM SNP 0042.scaffold00155 799618 1 C A scaffold13036 ScafM SNP 0042.scaffold00155 799915 1 T A scaffold13036 ScafM INDEL 0042.scaffold00155 803865 1 . T scaffold23558 ScafM SNP 0042.scaffold00155 803899 1 A T scaffold23558 ScafM SNP 0042.scaffold00155 803966 1 A G scaffold23558 ScafM SNP 0042.scaffold00155 804638 1 G A scaffold23558 ScafM SNP 0042.scaffold00155 804837 1 C T scaffold23558 ScafM SNP 0042.scaffold00155 804915 1 G A scaffold23558 ScafM INDEL 0042.scaffold00155 804998 1 . T scaffold23558 ScafM SNP 0042.scaffold00155 806391 1 T A scaffold23558 ScafM SNP 0042.scaffold00155 806455 1 C A scaffold23558 ScafM SNP 0042.scaffold00155 807996 1 G A scaffold23558 ScafM SNP 0042.scaffold00155 808055 1 T C scaffold23558 ScafM SNP 0042.scaffold00155 808175 1 G C scaffold23558 ScafM SNP 0042.scaffold00155 808266 1 G T scaffold23558 ScafM SNP 0042.scaffold00155 808275 2 CT TG scaffold23558 ScafM SNP 0042.scaffold00155 808383 1 A G scaffold23558 ScafM SNP 0042.scaffold00155 808518 1 T C scaffold23558 ScafM SNP 0042.scaffold00155 808535 1 T A scaffold23558 ScafM SNP 0042.scaffold00155 808643 1 T C scaffold23558 ScafM SNP 0042.scaffold00155 808655 1 T C scaffold23558 ScafM SNP 0042.scaffold00155 808772 1 A C scaffold23558 ScafM INDEL 0042.scaffold00155 808887 1 A . scaffold23558 ScafM SNP 0042.scaffold00155 808949 1 A T scaffold23558 ScafM SNP 0042.scaffold00155 809017 1 G T scaffold23558 ScafM SNP 0042.scaffold00155 815259 1 A G scaffold26697 ScafM SNP 0042.scaffold00155 815277 1 T C scaffold26697 ScafM INDEL 0042.scaffold00155 815542 1 . G scaffold26697 ScafM SNP 0042.scaffold00155 815544 1 C A scaffold26697 ScafM SNP 0042.scaffold00155 815566 1 T C scaffold26697 ScafM SNP 0042.scaffold00155 815609 1 G A scaffold26697 ScafM SNP 0042.scaffold00155 815643 1 G A scaffold26697 ScafM SNP 0042.scaffold00155 815677 1 T C scaffold26697 ScafM SNP 0042.scaffold00155 815680 1 C T scaffold26697 ScafM SNP 0042.scaffold00155 815704 1 C T scaffold26697 ScafM SNP 0042.scaffold00155 815746 1 A G scaffold26697 ScafM SNP 0042.scaffold00155 836866 1 C G scaffold15049 ScafM SNP 0042.scaffold00155 836938 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 837199 1 G T scaffold15049 ScafM SNP 0042.scaffold00155 837464 1 G C scaffold15049 ScafM SNP 0042.scaffold00155 837617 1 T G scaffold15049 ScafM SNP 0042.scaffold00155 837628 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 837660 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 837742 1 T A scaffold15049 ScafM SNP 0042.scaffold00155 838187 1 G A scaffold15049 ScafM INDEL 0042.scaffold00155 838364 3 ... GTT scaffold15049 ScafM SNP 0042.scaffold00155 838482 1 A T scaffold15049 ScafM INDEL 0042.scaffold00155 838541 1 T . scaffold15049 ScafM SNP 0042.scaffold00155 838556 1 T A scaffold15049 ScafM SNP 0042.scaffold00155 838796 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 838816 1 T G scaffold15049 ScafM SNP 0042.scaffold00155 838818 1 C A scaffold15049 ScafM SNP 0042.scaffold00155 839269 1 A G scaffold15049 ScafM SNP 0042.scaffold00155 839680 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 839816 1 G A scaffold15049 ScafM SNP 0042.scaffold00155 839830 1 A G scaffold15049 ScafM SNP 0042.scaffold00155 839907 1 C T scaffold15049 ScafM SNP 0042.scaffold00155 840117 2 CA GC scaffold15049 ScafM SNP 0042.scaffold00155 840273 1 A T scaffold15049 ScafM INDEL 0042.scaffold00155 840586 6 GGTGCT ...... scaffold15049 ScafM SNP 0042.scaffold00155 840745 1 T C scaffold15049 ScafM SNP 0042.scaffold00155 840945 1 G T scaffold15049 ScafM SNP 0042.scaffold00155 841342 1 C T scaffold15049 ScafM SNP 0042.scaffold00155 841542 1 C T scaffold15049 ScafM SNP 0042.scaffold00155 841644 1 C T scaffold15049 ScafM SNP 0042.scaffold00155 842278 1 G C scaffold15049 ScafM SNP 0042.scaffold00155 842483 1 C G scaffold15049 ScafM SNP 0042.scaffold00155 845065 1 C T scaffold5941 ScafM SNP 0042.scaffold00155 845719 1 A G scaffold5941 ScafM SNP 0042.scaffold00155 845721 1 T C scaffold5941 ScafM SNP 0042.scaffold00155 845723 1 G C scaffold5941 ScafM SNP 0042.scaffold00155 845739 1 T A scaffold5941 ScafM SNP 0042.scaffold00155 845762 1 A G scaffold5941 ScafM SNP 0042.scaffold00155 845768 1 C T scaffold5941 ScafM SNP 0042.scaffold00155 858981 1 A G scaffold4465 ScafM SNP 0042.scaffold00155 858984 1 A C scaffold4465 ScafM SNP 0042.scaffold00155 858989 1 G T scaffold4465 ScafM INDEL 0042.scaffold00155 858990 1 . A scaffold4465 ScafM SNP 0042.scaffold00155 858993 1 C G scaffold4465 ScafM SNP 0042.scaffold00155 858998 1 C A scaffold4465 ScafM SNP 0042.scaffold00155 859012 1 T G scaffold4465 ScafM SNP 0042.scaffold00155 859018 1 G C scaffold4465 ScafM SNP 0042.scaffold00155 859029 1 T A scaffold4465 ScafM SNP 0042.scaffold00155 859033 1 C T scaffold4465 ScafM SNP 0042.scaffold00155 859038 1 C A scaffold4465 ScafM SNP 0042.scaffold00155 859040 1 A G scaffold4465 ScafM SNP 0042.scaffold00155 859053 3 GTT AAC scaffold4465 ScafM SNP 0042.scaffold00155 859066 1 A G scaffold4465 ScafM SNP 0042.scaffold00155 859143 1 A G scaffold4465 ScafM INDEL 0042.scaffold00155 859155 1 . T scaffold4465 ScafM SNP 0042.scaffold00155 859159 1 A T scaffold4465 ScafM SNP 0042.scaffold00155 859180 1 T C scaffold4465 ScafM SNP 0042.scaffold00155 859193 1 C T scaffold4465 ScafM SNP 0042.scaffold00155 859197 1 T A scaffold4465 ScafM SNP 0042.scaffold00155 859206 1 T G scaffold4465 ScafM SNP 0042.scaffold00155 864086 1 C A scaffold18066 ScafM SNP 0042.scaffold00155 864140 1 T C scaffold18066 ScafM SNP 0042.scaffold00155 865886 1 A G scaffold18066 ScafM SNP 0042.scaffold00155 865928 1 A T scaffold18066 ScafM SNP 0042.scaffold00155 872217 1 G A scaffold18066 ScafM SNP 0042.scaffold00155 872231 1 T G scaffold18066 ScafM SNP 0042.scaffold00155 872233 1 G A scaffold18066 ScafM SNP 0042.scaffold00155 872370 1 C A scaffold18066 ScafM SNP 0042.scaffold00155 872424 1 A T scaffold18066 ScafM SNP 0042.scaffold00155 872498 1 A T scaffold18066 ScafM SNP 0042.scaffold00155 872519 1 G A scaffold18066 ScafM SNP 0042.scaffold00155 872582 1 G A scaffold18066 ScafM SNP 0042.scaffold00155 873857 1 T C scaffold49594 ScafM SNP 0042.scaffold00155 874083 1 G A scaffold49594 ScafM SNP 0042.scaffold00155 874165 1 G A scaffold49594 ScafM SNP 0042.scaffold00155 874211 1 C G scaffold49594 ScafM SNP 0042.scaffold00155 874326 1 G A scaffold49594 ScafM INDEL 0042.scaffold00155 874328 1 . T scaffold49594 ScafM SNP 0042.scaffold00155 875075 1 G A scaffold49594 ScafM SNP 0042.scaffold00155 875077 1 A T scaffold49594 ScafM SNP 0042.scaffold00155 875128 1 T A scaffold49594 ScafM SNP 0042.scaffold00155 875405 1 G A scaffold49594 ScafM SNP 0042.scaffold00155 875416 1 T C scaffold49594 ScafM SNP 0042.scaffold00155 892916 1 G A scaffold3174 ScafM SNP 0042.scaffold00155 892936 1 G A scaffold3174 ScafM SNP 0042.scaffold00155 892948 1 T A scaffold3174 ScafM SNP 0042.scaffold00155 892960 1 C A scaffold3174 ScafM SNP 0042.scaffold00155 893008 1 C T scaffold3174 ScafM SNP 0042.scaffold00155 893020 1 G A scaffold3174 ScafM SNP 0042.scaffold00155 893028 1 C A scaffold3174 ScafM INDEL 0042.scaffold00155 893032 11 AGACGTTTCTC ........... scaffold3174 ScafM SNP 0042.scaffold00155 893049 1 T A scaffold3174 ScafM SNP 0042.scaffold00155 893058 1 T C scaffold3174 ScafM SNP 0042.scaffold00155 893063 1 T A scaffold3174 ScafM SNP 0042.scaffold00155 893069 1 G C scaffold3174 ScafM SNP 0042.scaffold00155 893076 1 A C scaffold3174 ScafM SNP 0042.scaffold00155 893145 1 G A scaffold3174 ScafM SNP 0042.scaffold00155 893168 1 T C scaffold3174 ScafM SNP 0042.scaffold00155 893195 1 A G scaffold3174 ScafM SNP 0042.scaffold00155 893226 1 A G scaffold3174 ScafM SNP 0042.scaffold00155 893235 1 C T scaffold3174 ScafM SNP 0042.scaffold00155 893240 1 T C scaffold3174 ScafM SNP 0042.scaffold00155 893265 1 C T scaffold3174 ScafM SNP 0042.scaffold00155 893268 1 T A scaffold3174 ScafM SNP 0042.scaffold00155 893303 1 C A scaffold3174 ScafM INDEL 0042.scaffold00155 893319 1 A . scaffold3174 ScafM SNP 0042.scaffold00155 893326 1 T G scaffold3174 ScafM SNP 0042.scaffold00155 893329 1 A T scaffold3174 ScafM INDEL 0042.scaffold00155 893337 2 .T AA scaffold3174 ScafM SNP 0042.scaffold00155 893351 1 G C scaffold3174 ScafM SNP 0042.scaffold00155 893355 1 T G scaffold3174 ScafM SNP 0042.scaffold00155 893395 1 C T scaffold3174 ScafM SNP 0042.scaffold00155 893401 1 G C scaffold3174 ScafM INDEL 0042.scaffold00155 893408 5 TTTTT ..... scaffold3174 ScafM INDEL 0042.scaffold00155 893446 1 G . scaffold3174 ScafM SNP 0042.scaffold00155 893451 1 T C scaffold3174 ScafM SNP 0042.scaffold00155 893477 1 G A scaffold3174 ScafM SNP 0042.scaffold00155 893491 2 CG TA scaffold3174 ScafM SNP 0042.scaffold00155 893494 1 A G scaffold3174 ScafM SNP 0042.scaffold00155 893523 1 T A scaffold3174 ReadM SNP 0042.scaffold00155 895338 1 A G - ReadM SNP 0042.scaffold00155 895347 1 G C - ReadM SNP 0042.scaffold00155 895392 1 C T - ScafM SNP 0042.scaffold00155 899938 1 C G scaffold4971 ScafM SNP 0042.scaffold00155 899946 1 T A scaffold4971 ScafM SNP 0042.scaffold00155 900021 1 C T scaffold4971 Both INDEL 0042.scaffold00155 900341 1 . A scaffold4971 ScafM SNP 0042.scaffold00155 900378 1 A G scaffold4971 ScafM SNP 0042.scaffold00155 900415 1 C T scaffold4971 ScafM SNP 0042.scaffold00155 900422 1 A C scaffold4971 ScafM SNP 0042.scaffold00155 900517 1 G C scaffold4971 ScafM SNP 0042.scaffold00155 900697 1 C T scaffold4971 ScafM SNP 0042.scaffold00155 900764 1 A T scaffold4971 ScafM SNP 0042.scaffold00155 900785 1 T A scaffold4971 ScafM SNP 0042.scaffold00155 900869 1 A C scaffold4971 ScafM SNP 0042.scaffold00155 900971 1 A G scaffold4971 ScafM SNP 0042.scaffold00155 901200 1 G A scaffold4971 ScafM SNP 0042.scaffold00155 901243 1 A G scaffold4971 ScafM SNP 0042.scaffold00155 901350 1 G A scaffold4971 ScafM SNP 0042.scaffold00155 905097 1 T G scaffold12788 ScafM SNP 0042.scaffold00155 905117 1 T C scaffold12788 ScafM SNP 0042.scaffold00155 905136 1 T G scaffold12788 ScafM INDEL 0042.scaffold00155 905173 1 . T scaffold12788 ScafM SNP 0042.scaffold00155 905192 1 C T scaffold12788 ScafM SNP 0042.scaffold00155 905210 1 C G scaffold12788 ScafM SNP 0042.scaffold00155 905240 1 C A scaffold12788 ScafM INDEL 0042.scaffold00155 905245 1 G . scaffold12788 ScafM SNP 0042.scaffold00155 905248 1 G A scaffold12788 ScafM SNP 0042.scaffold00155 905253 3 TCA AGG scaffold12788 ScafM SNP 0042.scaffold00155 905284 1 T C scaffold12788 ScafM SNP 0042.scaffold00155 905328 1 C T scaffold5531 ScafM SNP 0042.scaffold00155 905382 1 A T scaffold5531 ScafM SNP 0042.scaffold00155 905411 1 T C scaffold5531 ScafM SNP 0042.scaffold00155 905466 1 A C scaffold5531 ScafM SNP 0042.scaffold00155 905568 1 A C scaffold5531 ScafM SNP 0042.scaffold00155 905732 1 T A scaffold5531 ScafM SNP 0042.scaffold00155 905776 1 G T scaffold5531 ScafM SNP 0042.scaffold00155 905855 1 T C scaffold5531 ScafM INDEL 0042.scaffold00155 905982 1 . A scaffold5531 ScafM SNP 0042.scaffold00155 906040 1 C A scaffold5531 ScafM SNP 0042.scaffold00155 906068 1 T C scaffold5531 ScafM SNP 0042.scaffold00155 906128 1 A G scaffold5531 ScafM SNP 0042.scaffold00155 906251 1 C A scaffold5531 ScafM SNP 0042.scaffold00155 906261 1 T G scaffold5531 ScafM SNP 0042.scaffold00155 906267 1 C G scaffold5531 ScafM INDEL 0042.scaffold00155 906424 3 ACA ... scaffold5531 ScafM SNP 0042.scaffold00155 906435 1 A T scaffold5531 ScafM INDEL 0042.scaffold00155 906486 1 T . scaffold5531 ScafM SNP 0042.scaffold00155 906741 1 A G scaffold5531 ScafM SNP 0042.scaffold00155 906743 1 A G scaffold5531 ScafM INDEL 0042.scaffold00155 906869 1 . A scaffold5531 ScafM SNP 0042.scaffold00155 906936 1 T G scaffold5531 ScafM SNP 0042.scaffold00155 906944 1 A G scaffold5531 ScafM SNP 0042.scaffold00155 906969 1 C G scaffold5531 ScafM SNP 0042.scaffold00155 906975 1 A C scaffold5531 ScafM SNP 0042.scaffold00155 906995 1 C T scaffold5531 ScafM SNP 0042.scaffold00155 907010 1 A G scaffold5531 ScafM SNP 0042.scaffold00155 907034 1 T C scaffold5531 ScafM SNP 0042.scaffold00155 909006 1 A C scaffold26437 ScafM SNP 0042.scaffold00155 909157 1 A G scaffold26437 ScafM SNP 0042.scaffold00155 909224 1 T C scaffold26437 ScafM SNP 0042.scaffold00155 909272 1 C T scaffold26437 ScafM SNP 0042.scaffold00155 909346 1 C T scaffold26437 ScafM SNP 0042.scaffold00155 909348 1 T C scaffold26437 ReadM INDEL 0042.scaffold00155 914888 1 T . - ScafM SNP 0042.scaffold00155 914980 1 A G scaffold49069 ScafM INDEL 0042.scaffold00155 914986 1 . T scaffold49069 ScafM SNP 0042.scaffold00155 914990 1 C T scaffold49069 ScafM INDEL 0042.scaffold00155 915004 1 T . scaffold49069 ScafM INDEL 0042.scaffold00155 915006 1 . A scaffold49069 ScafM SNP 0042.scaffold00155 915011 1 C A scaffold49069 ScafM SNP 0042.scaffold00155 915013 1 A G scaffold49069 ScafM SNP 0042.scaffold00155 915017 2 TA CG scaffold49069 ScafM SNP 0042.scaffold00155 915036 1 G A scaffold49069 ScafM SNP 0042.scaffold00155 915048 2 TA GT scaffold49069 ScafM SNP 0042.scaffold00155 915054 1 G T scaffold49069 ScafM SNP 0042.scaffold00155 915056 1 G A scaffold49069 ScafM SNP 0042.scaffold00155 915072 1 G A scaffold49069 ScafM SNP 0042.scaffold00155 915091 2 CT TA scaffold49069 ScafM SNP 0042.scaffold00155 915097 1 C A scaffold49069 ScafM SNP 0042.scaffold00155 915099 1 A G scaffold49069 ScafM SNP 0042.scaffold00155 915107 1 T C scaffold49069 ScafM SNP 0042.scaffold00155 915195 1 T G scaffold49069 ScafM SNP 0042.scaffold00155 915220 1 T C scaffold49069 ScafM SNP 0042.scaffold00155 915240 1 A G scaffold49069 ScafM SNP 0042.scaffold00155 915243 1 T C scaffold49069 ScafM SNP 0042.scaffold00155 915278 1 T A scaffold49069 ScafM SNP 0042.scaffold00155 923190 1 G C C19738916 ScafM SNP 0042.scaffold00155 923273 1 C T C19738916 ScafM SNP 0042.scaffold00155 923481 1 C T C19738916 ScafM INDEL 0042.scaffold00155 923566 1 T . C19738916 ScafM SNP 0042.scaffold00155 923573 1 T C C19738916 ScafM SNP 0042.scaffold00155 924088 1 T C C19738916 ScafM SNP 0042.scaffold00155 924488 1 C A C19738916 ScafM SNP 0042.scaffold00155 924569 1 T C C19738916 ScafM INDEL 0042.scaffold00155 926675 1 A . scaffold10050 ScafM SNP 0042.scaffold00155 926901 1 C T scaffold10050 ScafM SNP 0042.scaffold00155 926914 1 C T scaffold10050 ScafM SNP 0042.scaffold00155 927002 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 927800 1 A T scaffold10050 ScafM SNP 0042.scaffold00155 928024 1 C T scaffold10050 ScafM SNP 0042.scaffold00155 928199 1 A G scaffold10050 ScafM SNP 0042.scaffold00155 928586 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 930016 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 930298 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 930327 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 931981 1 C T scaffold10050 ScafM INDEL 0042.scaffold00155 932247 1 . T scaffold10050 ScafM SNP 0042.scaffold00155 932569 1 C T scaffold10050 ScafM SNP 0042.scaffold00155 932617 1 A T scaffold10050 ScafM SNP 0042.scaffold00155 932995 1 A T scaffold10050 ScafM SNP 0042.scaffold00155 933092 1 G C scaffold10050 ScafM SNP 0042.scaffold00155 933539 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 933553 1 A G scaffold10050 ScafM SNP 0042.scaffold00155 933921 1 G T scaffold10050 ScafM SNP 0042.scaffold00155 934020 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 934028 1 C G scaffold10050 ScafM INDEL 0042.scaffold00155 934472 6 ACCCAA ...... scaffold10050 ScafM SNP 0042.scaffold00155 934479 1 A T scaffold10050 ScafM SNP 0042.scaffold00155 934895 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 934909 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 935036 1 T C scaffold10050 ScafM INDEL 0042.scaffold00155 935087 2 AA .. scaffold10050 ScafM SNP 0042.scaffold00155 935128 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 935153 1 T C scaffold10050 ScafM SNP 0042.scaffold00155 935251 1 T C scaffold10050 ScafM INDEL 0042.scaffold00155 935266 1 T . scaffold10050 ScafM SNP 0042.scaffold00155 935436 1 C G scaffold10050 ScafM SNP 0042.scaffold00155 935521 1 A C scaffold10050 ScafM INDEL 0042.scaffold00155 935710 5 ..... CGACA scaffold10050 ScafM SNP 0042.scaffold00155 935958 1 C A scaffold10050 ScafM SNP 0042.scaffold00155 935972 1 G C scaffold10050 ScafM SNP 0042.scaffold00155 936269 1 C T scaffold10050 ScafM SNP 0042.scaffold00155 936444 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 936534 1 A G scaffold10050 ScafM SNP 0042.scaffold00155 936769 1 G A scaffold10050 ScafM SNP 0042.scaffold00155 936894 1 A C scaffold10050 ScafM SNP 0042.scaffold00155 938252 2 AG TA scaffold1431 ScafM SNP 0042.scaffold00155 938479 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 938506 1 T G scaffold1431 ScafM SNP 0042.scaffold00155 938698 1 G A scaffold1431 ScafM SNP 0042.scaffold00155 938786 1 G T scaffold1431 ScafM SNP 0042.scaffold00155 938813 1 G T scaffold1431 ScafM SNP 0042.scaffold00155 938971 1 T C scaffold1431 ScafM SNP 0042.scaffold00155 939046 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 940178 1 A C scaffold1431 ScafM SNP 0042.scaffold00155 940220 1 C A scaffold1431 ScafM SNP 0042.scaffold00155 940238 1 C G scaffold1431 ScafM SNP 0042.scaffold00155 940399 1 C G scaffold1431 ScafM INDEL 0042.scaffold00155 940415 1 . G scaffold1431 ScafM SNP 0042.scaffold00155 940444 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 940452 1 T G scaffold1431 ScafM INDEL 0042.scaffold00155 940524 1 G . scaffold1431 ScafM SNP 0042.scaffold00155 940741 1 A T scaffold1431 ScafM SNP 0042.scaffold00155 940766 1 C G scaffold1431 ScafM SNP 0042.scaffold00155 940782 1 G T scaffold1431 ScafM SNP 0042.scaffold00155 940904 1 A T scaffold1431 ScafM SNP 0042.scaffold00155 940914 1 C T scaffold1431 ScafM SNP 0042.scaffold00155 940984 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 941135 1 C T scaffold1431 ScafM INDEL 0042.scaffold00155 941273 1 . T scaffold1431 ScafM SNP 0042.scaffold00155 941386 1 T C scaffold1431 ScafM SNP 0042.scaffold00155 941443 1 A T scaffold1431 ScafM SNP 0042.scaffold00155 941499 1 A C scaffold1431 ScafM INDEL 0042.scaffold00155 941617 15 ............... TGTTTTTTTTTTTTT scaffold1431 ScafM SNP 0042.scaffold00155 942230 1 T G scaffold1431 ScafM SNP 0042.scaffold00155 942265 1 C G scaffold1431 ScafM SNP 0042.scaffold00155 942358 1 T C scaffold1431 ScafM SNP 0042.scaffold00155 942451 1 C A scaffold1431 ScafM SNP 0042.scaffold00155 942644 1 A T scaffold1431 ScafM SNP 0042.scaffold00155 942830 1 G A scaffold1431 ScafM SNP 0042.scaffold00155 943046 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 943479 1 T C scaffold1431 ScafM SNP 0042.scaffold00155 943562 1 T G scaffold1431 ScafM SNP 0042.scaffold00155 943613 1 A G scaffold1431 ScafM INDEL 0042.scaffold00155 943657 1 . A scaffold1431 ScafM SNP 0042.scaffold00155 943668 1 C A scaffold1431 ScafM SNP 0042.scaffold00155 943799 1 C T scaffold1431 ScafM INDEL 0042.scaffold00155 943954 1 T . scaffold1431 ScafM SNP 0042.scaffold00155 943956 1 T A scaffold1431 ScafM SNP 0042.scaffold00155 944201 1 C T scaffold1431 ScafM SNP 0042.scaffold00155 944419 1 T C scaffold1431 ScafM SNP 0042.scaffold00155 944447 1 T A scaffold1431 ScafM SNP 0042.scaffold00155 944999 1 C T scaffold1431 ScafM SNP 0042.scaffold00155 945040 1 A G scaffold1431 ScafM SNP 0042.scaffold00155 945142 1 A C scaffold1431 ScafM SNP 0042.scaffold00155 945783 1 A C scaffold1431 ReadM SNP 0042.scaffold00155 954057 1 C T - ScafM SNP 0042.scaffold00155 958699 1 C A scaffold37780 ScafM INDEL 0042.scaffold00155 958704 3 AGT ... scaffold37780 ScafM SNP 0042.scaffold00155 958728 1 G T scaffold37780 ScafM SNP 0042.scaffold00155 958867 1 T A scaffold37780 ScafM INDEL 0042.scaffold00155 959132 1 . A scaffold37780 ScafM SNP 0042.scaffold00155 959151 1 T C scaffold37780 ScafM INDEL 0042.scaffold00155 959187 13 TTGAGTTCGTCGG ............. scaffold37780 ScafM SNP 0042.scaffold00155 959233 1 G A scaffold37780 ScafM SNP 0042.scaffold00155 959333 1 A C scaffold37780 ScafM SNP 0042.scaffold00155 986025 1 C T scaffold6011 ScafM SNP 0042.scaffold00155 986085 1 C T scaffold6011 ScafM SNP 0042.scaffold00155 986102 1 G C scaffold6011 ScafM SNP 0043.scaffold00157 16128 1 T G scaffold2470 ReadM SNP 0043.scaffold00157 59576 1 G T - ScafM SNP 0043.scaffold00157 80495 1 A G scaffold1495 ScafM INDEL 0043.scaffold00157 143868 1 . T scaffold1495 ScafM SNP 0043.scaffold00157 155896 1 T C scaffold2046 ScafM SNP 0043.scaffold00157 155954 1 G A scaffold2046 ScafM INDEL 0043.scaffold00157 155959 1 A . scaffold2046 ScafM SNP 0043.scaffold00157 155975 1 A C scaffold2046 ScafM INDEL 0043.scaffold00157 155979 2 .. AC scaffold2046 ScafM SNP 0043.scaffold00157 155989 1 G A scaffold2046 ScafM SNP 0043.scaffold00157 156004 1 C T scaffold2046 ScafM SNP 0043.scaffold00157 156019 1 A T scaffold2046 ScafM SNP 0043.scaffold00157 156022 1 T A scaffold2046 ScafM SNP 0043.scaffold00157 156027 1 C A scaffold2046 ScafM SNP 0043.scaffold00157 156077 1 T C scaffold2046 ScafM INDEL 0043.scaffold00157 191667 1 . A scaffold6979 ReadM SNP 0043.scaffold00157 253658 1 A G - ScafM SNP 0043.scaffold00157 274717 1 G T scaffold6979 ScafM INDEL 0043.scaffold00157 274718 2 .. AA scaffold6979 ScafM SNP 0044.scaffold00158 414 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 421 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 427 1 A C scaffold5397 ScafM SNP 0044.scaffold00158 447 3 TGT ACG scaffold5397 ScafM SNP 0044.scaffold00158 451 1 C G scaffold5397 ScafM SNP 0044.scaffold00158 466 1 A T scaffold5397 ScafM SNP 0044.scaffold00158 510 1 G T scaffold5397 ScafM SNP 0044.scaffold00158 528 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 573 1 T G scaffold5397 ScafM SNP 0044.scaffold00158 588 1 C A scaffold5397 ScafM SNP 0044.scaffold00158 609 1 T C scaffold5397 ScafM INDEL 0044.scaffold00158 627 1 . A scaffold5397 ScafM SNP 0044.scaffold00158 704 1 A C scaffold5397 ScafM SNP 0044.scaffold00158 723 1 A C scaffold5397 ScafM SNP 0044.scaffold00158 757 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 761 1 T G scaffold5397 ScafM SNP 0044.scaffold00158 780 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 6235 1 C A scaffold9368 ScafM SNP 0044.scaffold00158 6243 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 6264 1 A C scaffold9368 ScafM SNP 0044.scaffold00158 6268 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6272 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 6280 1 G C scaffold9368 ScafM SNP 0044.scaffold00158 6322 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6326 1 A C scaffold9368 ScafM SNP 0044.scaffold00158 6351 2 TT AC scaffold9368 ScafM SNP 0044.scaffold00158 6379 1 A T scaffold9368 ScafM SNP 0044.scaffold00158 6387 1 T A scaffold9368 ScafM SNP 0044.scaffold00158 6400 2 CA AT scaffold9368 ScafM SNP 0044.scaffold00158 6422 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 6442 1 C A scaffold9368 ScafM SNP 0044.scaffold00158 6515 1 T C scaffold9368 ScafM INDEL 0044.scaffold00158 6590 1 . C scaffold9368 ScafM SNP 0044.scaffold00158 6604 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6609 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 6618 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 6647 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6661 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6685 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6692 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 6695 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 6697 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 6724 1 T G scaffold9368 ScafM SNP 0044.scaffold00158 6729 2 TT AG scaffold9368 ScafM SNP 0044.scaffold00158 6752 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 6840 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 6845 1 C A scaffold9368 ScafM SNP 0044.scaffold00158 6849 1 G A scaffold9368 Both SNP 0044.scaffold00158 6858 1 T G scaffold9368 Both SNP 0044.scaffold00158 6952 1 T C scaffold9368 Both SNP 0044.scaffold00158 6991 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 7005 2 AT TA scaffold9368 ReadM SNP 0044.scaffold00158 7006 1 T C - ScafM SNP 0044.scaffold00158 7087 1 T G scaffold9368 ScafM INDEL 0044.scaffold00158 7092 3 ATA ... scaffold9368 ScafM SNP 0044.scaffold00158 7136 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7149 2 CA TT scaffold9368 ScafM SNP 0044.scaffold00158 7161 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 7218 1 G T scaffold9368 ScafM SNP 0044.scaffold00158 7237 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7241 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 7250 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 7257 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 7272 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 7277 1 T A scaffold9368 ScafM SNP 0044.scaffold00158 7303 1 C A scaffold9368 ScafM SNP 0044.scaffold00158 7318 2 TG CA scaffold9368 ScafM SNP 0044.scaffold00158 7338 1 A C scaffold9368 ScafM SNP 0044.scaffold00158 7343 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7387 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7389 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 7401 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7416 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7428 1 A C scaffold9368 ScafM SNP 0044.scaffold00158 7463 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7473 1 T C scaffold9368 ScafM SNP 0044.scaffold00158 7480 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 7499 1 T A scaffold9368 ScafM SNP 0044.scaffold00158 7503 1 A G scaffold9368 ScafM INDEL 0044.scaffold00158 7515 1 T . scaffold9368 ScafM SNP 0044.scaffold00158 7544 1 G A scaffold9368 ScafM SNP 0044.scaffold00158 7548 1 C T scaffold9368 ScafM SNP 0044.scaffold00158 7594 1 A G scaffold9368 ScafM SNP 0044.scaffold00158 8330 1 G A scaffold15844 ScafM SNP 0044.scaffold00158 8347 1 A G scaffold15844 ScafM SNP 0044.scaffold00158 8360 1 T G scaffold15844 ScafM SNP 0044.scaffold00158 8363 1 A G scaffold15844 ScafM SNP 0044.scaffold00158 8366 1 A C scaffold15844 ScafM SNP 0044.scaffold00158 8368 2 GT AC scaffold15844 ScafM SNP 0044.scaffold00158 8378 1 G A scaffold15844 ScafM SNP 0044.scaffold00158 8386 2 AA GG scaffold15844 ScafM SNP 0044.scaffold00158 8390 1 G A scaffold15844 ScafM SNP 0044.scaffold00158 8393 1 T A scaffold15844 ScafM SNP 0044.scaffold00158 8401 1 A G scaffold15844 ScafM SNP 0044.scaffold00158 8405 2 AT TA scaffold15844 ScafM SNP 0044.scaffold00158 8416 1 G A scaffold15844 ScafM SNP 0044.scaffold00158 8423 1 A T scaffold15844 ScafM INDEL 0044.scaffold00158 8425 1 . A scaffold15844 ReadM SNP 0044.scaffold00158 8560 1 A G - ScafM SNP 0044.scaffold00158 8696 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 8701 1 G T scaffold5397 ScafM SNP 0044.scaffold00158 8710 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 8716 1 T G scaffold5397 ScafM SNP 0044.scaffold00158 8757 1 A G scaffold5397 ScafM SNP 0044.scaffold00158 8759 2 AG TC scaffold5397 ScafM SNP 0044.scaffold00158 8762 1 G C scaffold5397 ScafM SNP 0044.scaffold00158 8806 2 TG CA scaffold5397 ScafM SNP 0044.scaffold00158 8867 1 C G scaffold5397 Both SNP 0044.scaffold00158 8911 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 8947 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 8966 1 A T scaffold5397 ScafM SNP 0044.scaffold00158 8974 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 8989 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 8995 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 9016 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 9030 1 A G scaffold5397 ScafM SNP 0044.scaffold00158 9032 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 9035 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 9056 1 T G scaffold5397 ScafM SNP 0044.scaffold00158 9061 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 9069 1 A T scaffold5397 ScafM SNP 0044.scaffold00158 9078 1 T G scaffold5397 ScafM SNP 0044.scaffold00158 9100 1 C T scaffold5397 ScafM SNP 0044.scaffold00158 9127 1 A G scaffold5397 ScafM SNP 0044.scaffold00158 9135 1 T C scaffold5397 ScafM SNP 0044.scaffold00158 9202 1 A G scaffold5397 ScafM SNP 0044.scaffold00158 9207 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 9214 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 9273 1 A G scaffold5397 ScafM SNP 0044.scaffold00158 9285 1 G A scaffold5397 ScafM SNP 0044.scaffold00158 9336 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 9356 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 9363 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9373 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9381 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 9440 1 G T scaffold16180 ScafM SNP 0044.scaffold00158 9481 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 9513 1 G A scaffold16180 ScafM INDEL 0044.scaffold00158 9540 4 TTCT .... scaffold16180 ScafM SNP 0044.scaffold00158 9551 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 9573 1 A T scaffold16180 ScafM SNP 0044.scaffold00158 9582 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9607 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 9660 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9708 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 9816 1 C A scaffold16180 ScafM INDEL 0044.scaffold00158 9820 2 .. AT scaffold16180 ScafM SNP 0044.scaffold00158 9834 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 9843 1 G C scaffold16180 Both SNP 0044.scaffold00158 9854 1 G A scaffold16180 Both SNP 0044.scaffold00158 9885 1 T A scaffold16180 ScafM SNP 0044.scaffold00158 9961 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9964 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 9975 1 T G scaffold16180 ScafM SNP 0044.scaffold00158 9978 1 C T scaffold16180 ScafM INDEL 0044.scaffold00158 10012 2 .. AT scaffold16180 ScafM SNP 0044.scaffold00158 10019 1 C G scaffold16180 ScafM SNP 0044.scaffold00158 10021 1 C G scaffold16180 ScafM SNP 0044.scaffold00158 10028 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 10030 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 10039 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 10053 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 10058 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 10061 1 C A scaffold16180 Both SNP 0044.scaffold00158 10074 1 A T scaffold16180 Both SNP 0044.scaffold00158 10190 1 G T scaffold16180 Both SNP 0044.scaffold00158 10199 1 G T scaffold16180 Both SNP 0044.scaffold00158 10278 1 A G scaffold16180 Both SNP 0044.scaffold00158 10347 1 A G scaffold16180 Both SNP 0044.scaffold00158 10366 1 C T scaffold16180 Both SNP 0044.scaffold00158 10387 1 A G scaffold16180 Both SNP 0044.scaffold00158 10420 1 T G scaffold16180 Both SNP 0044.scaffold00158 10469 1 G A scaffold16180 Both SNP 0044.scaffold00158 10490 1 G T scaffold16180 ScafM SNP 0044.scaffold00158 10541 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 10543 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 10547 1 A G scaffold16180 Both SNP 0044.scaffold00158 10565 1 C T scaffold16180 ReadM SNP 0044.scaffold00158 10616 1 T C - ScafM SNP 0044.scaffold00158 10616 2 TA CC scaffold16180 Both SNP 0044.scaffold00158 10721 1 C T scaffold16180 Both SNP 0044.scaffold00158 10731 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 10747 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 10751 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 10758 1 A G scaffold16180 ScafM INDEL 0044.scaffold00158 10769 1 C . scaffold16180 Both SNP 0044.scaffold00158 10807 1 A G scaffold16180 Both SNP 0044.scaffold00158 10814 1 G C scaffold16180 Both SNP 0044.scaffold00158 10827 1 A G scaffold16180 Both SNP 0044.scaffold00158 10890 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 10945 1 A G scaffold16180 Both SNP 0044.scaffold00158 10956 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 10976 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 10994 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 11020 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11040 1 G T scaffold16180 Both SNP 0044.scaffold00158 11052 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 11058 1 A T scaffold16180 ReadM SNP 0044.scaffold00158 11079 1 T A - ScafM SNP 0044.scaffold00158 11089 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 11097 1 C T scaffold16180 ScafM INDEL 0044.scaffold00158 11118 1 A . scaffold16180 ScafM SNP 0044.scaffold00158 11120 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11145 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 11171 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11190 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 11198 1 A T scaffold16180 ScafM INDEL 0044.scaffold00158 11205 4 CCCT .... scaffold16180 ScafM SNP 0044.scaffold00158 11235 1 G C scaffold16180 Both SNP 0044.scaffold00158 11300 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11331 1 G C scaffold16180 ScafM SNP 0044.scaffold00158 11341 1 C A scaffold16180 Both SNP 0044.scaffold00158 11389 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 11419 1 G A scaffold16180 ScafM INDEL 0044.scaffold00158 11425 1 A . scaffold16180 ReadM SNP 0044.scaffold00158 11439 1 A G - ScafM SNP 0044.scaffold00158 11439 2 AA GG scaffold16180 ScafM SNP 0044.scaffold00158 11443 1 G A scaffold16180 Both INDEL 0044.scaffold00158 11496 1 . A scaffold16180 Both SNP 0044.scaffold00158 11546 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 11580 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 11635 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11650 1 A G scaffold16180 ScafM INDEL 0044.scaffold00158 11655 1 T . scaffold16180 ScafM SNP 0044.scaffold00158 11685 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 11698 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11731 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11744 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 11778 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11786 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 11789 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11804 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11812 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11866 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 11890 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 11905 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 11964 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 11992 1 T G scaffold16180 ScafM INDEL 0044.scaffold00158 11996 2 AT .. scaffold16180 ScafM SNP 0044.scaffold00158 12012 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 12014 1 G A scaffold16180 ScafM INDEL 0044.scaffold00158 12016 1 A . scaffold16180 ScafM SNP 0044.scaffold00158 12029 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 12033 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 12038 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 12040 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 12047 1 A C scaffold16180 ScafM SNP 0044.scaffold00158 12069 1 T A scaffold16180 ScafM SNP 0044.scaffold00158 12078 2 TT AC scaffold16180 ScafM SNP 0044.scaffold00158 12094 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 12107 1 C G scaffold16180 ScafM SNP 0044.scaffold00158 12219 1 G T scaffold16180 ScafM SNP 0044.scaffold00158 12310 1 T G scaffold16180 ScafM SNP 0044.scaffold00158 12313 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 12319 1 A T scaffold16180 ScafM SNP 0044.scaffold00158 12339 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 12341 1 T G scaffold16180 ScafM SNP 0044.scaffold00158 12367 1 A T scaffold16180 ScafM SNP 0044.scaffold00158 12397 1 C A scaffold16180 Both SNP 0044.scaffold00158 12413 1 G T scaffold16180 ScafM SNP 0044.scaffold00158 12508 1 A T scaffold16180 ScafM SNP 0044.scaffold00158 12577 1 C A scaffold16180 ScafM INDEL 0044.scaffold00158 12579 1 A . scaffold16180 ScafM INDEL 0044.scaffold00158 12582 1 . C scaffold16180 ScafM SNP 0044.scaffold00158 12587 1 T G scaffold16180 ScafM SNP 0044.scaffold00158 12616 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 12626 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 12635 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 12655 1 G T scaffold16180 ScafM SNP 0044.scaffold00158 12676 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 12686 1 G A scaffold16180 ScafM SNP 0044.scaffold00158 12716 1 A G scaffold16180 ScafM SNP 0044.scaffold00158 12732 1 C G scaffold16180 ScafM SNP 0044.scaffold00158 12740 1 T G scaffold16180 ScafM SNP 0044.scaffold00158 12766 1 C G scaffold16180 ScafM SNP 0044.scaffold00158 12783 1 C T scaffold16180 ScafM SNP 0044.scaffold00158 12792 1 C A scaffold16180 Both SNP 0044.scaffold00158 12857 1 C T scaffold16180 Both SNP 0044.scaffold00158 12860 1 G A scaffold16180 Both SNP 0044.scaffold00158 12864 1 T C scaffold16180 ScafM SNP 0044.scaffold00158 12920 1 C A scaffold16180 ScafM SNP 0044.scaffold00158 12993 1 C T scaffold16180 Both SNP 0044.scaffold00158 13002 1 T C scaffold16180 ReadM SNP 0044.scaffold00158 13294 1 A G - ReadM SNP 0044.scaffold00158 13634 1 A G - ReadM SNP 0044.scaffold00158 13663 1 T G - ScafM INDEL 0044.scaffold00158 13897 1 T . scaffold2917 ScafM SNP 0044.scaffold00158 13901 1 A G scaffold2917 ScafM SNP 0044.scaffold00158 13950 1 A G scaffold2917 ScafM INDEL 0044.scaffold00158 13959 1 . A scaffold2917 ScafM SNP 0044.scaffold00158 13966 1 T C scaffold2917 ScafM SNP 0044.scaffold00158 13971 1 T G scaffold2917 ScafM SNP 0044.scaffold00158 13981 1 A G scaffold2917 ScafM INDEL 0044.scaffold00158 13984 1 T . scaffold2917 ScafM SNP 0044.scaffold00158 13986 1 T A scaffold2917 ScafM SNP 0044.scaffold00158 13994 1 G T scaffold2917 ScafM SNP 0044.scaffold00158 14011 1 T G scaffold2917 ScafM SNP 0044.scaffold00158 14014 1 A T scaffold2917 ScafM SNP 0044.scaffold00158 14016 1 C A scaffold2917 ReadM SNP 0044.scaffold00158 14119 1 A G - ReadM SNP 0044.scaffold00158 14176 1 T C - ReadM SNP 0044.scaffold00158 14226 1 T A - ReadM SNP 0044.scaffold00158 14270 1 G C - ReadM SNP 0044.scaffold00158 14560 1 G A - ScafM SNP 0044.scaffold00158 14686 2 CT GC scaffold62716 Both SNP 0044.scaffold00158 14730 1 A T scaffold62716 ScafM SNP 0044.scaffold00158 14756 1 A G scaffold62716 Both SNP 0044.scaffold00158 14760 1 T C scaffold62716 Both SNP 0044.scaffold00158 14833 1 C T scaffold62716 Both SNP 0044.scaffold00158 14867 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 14890 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 14928 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 14949 1 T A scaffold62716 ScafM SNP 0044.scaffold00158 14971 1 T C scaffold62716 Both SNP 0044.scaffold00158 15033 1 C T scaffold62716 Both INDEL 0044.scaffold00158 15035 2 .. TT scaffold62716 ScafM SNP 0044.scaffold00158 15087 1 T A scaffold62716 ScafM SNP 0044.scaffold00158 15096 1 A C scaffold62716 ScafM SNP 0044.scaffold00158 15101 1 G A scaffold62716 ScafM SNP 0044.scaffold00158 15108 1 T C scaffold62716 Both SNP 0044.scaffold00158 15130 1 T A scaffold62716 Both SNP 0044.scaffold00158 15154 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15223 1 G A scaffold62716 Both SNP 0044.scaffold00158 15229 1 A G scaffold62716 Both SNP 0044.scaffold00158 15309 1 T G scaffold62716 Both SNP 0044.scaffold00158 15314 1 A C scaffold62716 Both SNP 0044.scaffold00158 15356 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15376 2 AG GA scaffold62716 ScafM SNP 0044.scaffold00158 15404 1 G A scaffold62716 ScafM SNP 0044.scaffold00158 15422 1 A T scaffold62716 ScafM SNP 0044.scaffold00158 15443 1 A G scaffold62716 Both SNP 0044.scaffold00158 15450 1 G C scaffold62716 Both SNP 0044.scaffold00158 15480 1 A G scaffold62716 ScafM INDEL 0044.scaffold00158 15555 19 ................... AACGTGCTCTTGGATGGCT scaffold62716 ScafM SNP 0044.scaffold00158 15567 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 15588 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15604 1 G A scaffold62716 ScafM SNP 0044.scaffold00158 15628 1 T G scaffold62716 ScafM SNP 0044.scaffold00158 15632 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15638 1 G A scaffold62716 Both SNP 0044.scaffold00158 15650 1 G A scaffold62716 Both SNP 0044.scaffold00158 15691 1 T C scaffold62716 Both SNP 0044.scaffold00158 15757 1 T C scaffold62716 Both SNP 0044.scaffold00158 15766 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15793 1 C T scaffold62716 Both SNP 0044.scaffold00158 15802 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 15821 1 G C scaffold62716 ScafM SNP 0044.scaffold00158 15832 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 15838 1 T C scaffold62716 ScafM INDEL 0044.scaffold00158 15872 1 A . scaffold62716 ScafM SNP 0044.scaffold00158 15877 1 G T scaffold62716 ScafM SNP 0044.scaffold00158 15893 1 G A scaffold62716 ScafM SNP 0044.scaffold00158 15903 1 C T scaffold62716 Both SNP 0044.scaffold00158 15905 1 A G scaffold62716 Both SNP 0044.scaffold00158 15914 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 15965 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 15969 1 A G scaffold62716 Both SNP 0044.scaffold00158 15988 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 16022 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 16024 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 16030 1 A T scaffold62716 ScafM SNP 0044.scaffold00158 16117 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 16120 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 16122 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 16127 1 T C scaffold62716 ScafM SNP 0044.scaffold00158 16148 1 T C scaffold62716 ScafM INDEL 0044.scaffold00158 16150 1 . T scaffold62716 ScafM SNP 0044.scaffold00158 16159 1 A T scaffold62716 ScafM SNP 0044.scaffold00158 16170 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 16220 1 G C scaffold62716 ScafM SNP 0044.scaffold00158 16238 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 16240 1 G A scaffold62716 ScafM SNP 0044.scaffold00158 16253 1 G T scaffold62716 ScafM SNP 0044.scaffold00158 16260 1 A G scaffold62716 ScafM SNP 0044.scaffold00158 16271 1 C T scaffold62716 ScafM SNP 0044.scaffold00158 16275 1 T A scaffold62716 ScafM SNP 0044.scaffold00158 16281 1 A G scaffold62716 Both SNP 0044.scaffold00158 16297 1 C T scaffold62716 ReadM SNP 0044.scaffold00158 16313 1 C G - ReadM SNP 0044.scaffold00158 16427 1 T C - ReadM SNP 0044.scaffold00158 16437 1 T G - ReadM INDEL 0044.scaffold00158 16481 1 C . - ReadM SNP 0044.scaffold00158 16835 1 G A - ReadM SNP 0044.scaffold00158 16858 1 C T - ReadM SNP 0044.scaffold00158 16874 1 C T - ScafM SNP 0044.scaffold00158 17268 1 T C scaffold45510 ScafM SNP 0044.scaffold00158 17271 1 G A scaffold45510 ScafM INDEL 0044.scaffold00158 17279 3 CTA ... scaffold45510 ScafM SNP 0044.scaffold00158 17310 2 TC AA scaffold45510 ScafM SNP 0044.scaffold00158 17319 1 T C scaffold45510 ScafM INDEL 0044.scaffold00158 17324 2 AA .. scaffold45510 Both SNP 0044.scaffold00158 17385 1 A G scaffold45510 ScafM SNP 0044.scaffold00158 17506 1 A G scaffold45510 ScafM SNP 0044.scaffold00158 17522 1 A T scaffold45510 ScafM SNP 0044.scaffold00158 17528 1 A G scaffold45510 ScafM SNP 0044.scaffold00158 17543 1 A T scaffold45510 ScafM SNP 0044.scaffold00158 17571 1 C G scaffold45510 ScafM SNP 0044.scaffold00158 17574 1 T G scaffold45510 ScafM SNP 0044.scaffold00158 17596 1 C T scaffold45510 ScafM SNP 0044.scaffold00158 17618 1 T C scaffold45510 ScafM SNP 0044.scaffold00158 17625 1 G A scaffold45510 ScafM SNP 0044.scaffold00158 17642 1 A G scaffold45510 ScafM SNP 0044.scaffold00158 17660 2 GA TT scaffold45510 ScafM SNP 0044.scaffold00158 17687 1 T A scaffold45510 Both SNP 0044.scaffold00158 17720 1 C A scaffold45510 ReadM SNP 0044.scaffold00158 17844 1 G A - ScafM SNP 0044.scaffold00158 18100 1 T C scaffold23619 ScafM SNP 0044.scaffold00158 18102 1 G A scaffold23619 ScafM INDEL 0044.scaffold00158 18106 2 .. AA scaffold23619 ScafM SNP 0044.scaffold00158 18260 1 G T scaffold23619 ScafM INDEL 0044.scaffold00158 18270 2 CA .. scaffold23619 ScafM INDEL 0044.scaffold00158 18274 5 TTTTT ..... scaffold23619 ScafM SNP 0044.scaffold00158 18442 1 A G scaffold23619 Both INDEL 0044.scaffold00158 18502 1 . A scaffold23619 ScafM INDEL 0044.scaffold00158 18538 7 ....... TAATAAG scaffold23619 ScafM SNP 0044.scaffold00158 18574 1 C A scaffold23619 ScafM SNP 0044.scaffold00158 18679 1 T A scaffold23619 Both SNP 0044.scaffold00158 18904 1 G A scaffold23619 ScafM INDEL 0044.scaffold00158 18939 1 A . scaffold23619 ScafM INDEL 0044.scaffold00158 18980 1 A . scaffold23619 ScafM SNP 0044.scaffold00158 19030 1 T C scaffold23619 ScafM SNP 0044.scaffold00158 19064 1 A G scaffold23619 ScafM SNP 0044.scaffold00158 19228 1 A G scaffold23619 ScafM INDEL 0044.scaffold00158 19390 2 .A GT scaffold23619 ScafM SNP 0044.scaffold00158 19408 1 T A scaffold23619 ScafM SNP 0044.scaffold00158 19460 1 C T scaffold23619 ScafM SNP 0044.scaffold00158 19477 1 C A scaffold23619 ScafM SNP 0044.scaffold00158 19495 1 T C scaffold23619 ScafM INDEL 0044.scaffold00158 20215 16 ................ AGAATTTCAATGAATA scaffold7566 ScafM SNP 0044.scaffold00158 20242 1 C A scaffold7566 ScafM SNP 0044.scaffold00158 20376 1 C T scaffold7566 ScafM SNP 0044.scaffold00158 20460 1 T G scaffold7566 ScafM SNP 0044.scaffold00158 20475 1 C T scaffold7566 ScafM SNP 0044.scaffold00158 20626 1 T C scaffold7566 ScafM INDEL 0044.scaffold00158 20746 3 TTT ... scaffold7566 ScafM SNP 0044.scaffold00158 20773 1 A G scaffold7566 ScafM SNP 0044.scaffold00158 20812 1 T C scaffold7566 ScafM SNP 0044.scaffold00158 20824 1 G A scaffold7566 ScafM SNP 0044.scaffold00158 20836 1 C A scaffold7566 ScafM INDEL 0044.scaffold00158 20865 2 AG .. scaffold7566 ScafM SNP 0044.scaffold00158 20868 1 T G scaffold7566 ScafM SNP 0044.scaffold00158 20874 1 C T scaffold7566 Both SNP 0044.scaffold00158 20896 1 T G scaffold7566 ScafM INDEL 0044.scaffold00158 21094 1 . A scaffold7566 Both SNP 0044.scaffold00158 21227 1 T C scaffold7566 Both SNP 0044.scaffold00158 21578 1 T A scaffold7566 ScafM INDEL 0044.scaffold00158 21771 8 ........ TATTTCCA scaffold7566 ScafM INDEL 0044.scaffold00158 21807 1 T . scaffold7566 Both SNP 0044.scaffold00158 21878 1 A C scaffold7566 ScafM SNP 0044.scaffold00158 23643 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 23654 2 GC CT scaffold12229 ScafM SNP 0044.scaffold00158 23696 1 T A scaffold12229 ScafM SNP 0044.scaffold00158 23702 1 C A scaffold12229 ScafM SNP 0044.scaffold00158 23718 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 23737 1 C G scaffold12229 ScafM SNP 0044.scaffold00158 23739 1 G C scaffold12229 ScafM SNP 0044.scaffold00158 23780 1 G T scaffold12229 ScafM SNP 0044.scaffold00158 23811 2 AG TC scaffold12229 ScafM SNP 0044.scaffold00158 23825 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 23854 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 23938 1 C T scaffold12229 ScafM SNP 0044.scaffold00158 24130 1 G T scaffold12229 ScafM SNP 0044.scaffold00158 24141 4 ATGT TAAC scaffold12229 ScafM SNP 0044.scaffold00158 24155 1 A T scaffold12229 ScafM SNP 0044.scaffold00158 24169 1 A C scaffold12229 ScafM INDEL 0044.scaffold00158 24181 1 . G scaffold12229 ScafM INDEL 0044.scaffold00158 24224 1 T . scaffold12229 ScafM SNP 0044.scaffold00158 24272 3 GTT CAA scaffold12229 Both SNP 0044.scaffold00158 24462 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 24483 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 24684 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 24757 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 24819 1 A T scaffold12229 ScafM INDEL 0044.scaffold00158 24859 1 A . scaffold12229 ScafM INDEL 0044.scaffold00158 24913 1 . T scaffold12229 ScafM SNP 0044.scaffold00158 25046 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 25095 1 C A scaffold12229 ScafM SNP 0044.scaffold00158 25142 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 25188 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 25287 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 25297 1 A C scaffold12229 ScafM SNP 0044.scaffold00158 25418 1 C T scaffold12229 ScafM SNP 0044.scaffold00158 25475 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 25480 1 A T scaffold12229 ReadM SNP 0044.scaffold00158 25550 1 G A - ReadM SNP 0044.scaffold00158 25961 1 C G - ScafM SNP 0044.scaffold00158 26044 1 T C scaffold45236 Both SNP 0044.scaffold00158 26124 1 G C scaffold45236 ScafM SNP 0044.scaffold00158 26309 1 G T scaffold45236 ScafM SNP 0044.scaffold00158 27136 1 C A scaffold12229 ScafM SNP 0044.scaffold00158 27155 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 27328 1 A G scaffold12229 Both SNP 0044.scaffold00158 27350 1 C T scaffold12229 ScafM SNP 0044.scaffold00158 27403 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 27415 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 27436 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 27462 1 T A scaffold12229 ScafM SNP 0044.scaffold00158 27523 1 G A scaffold12229 ScafM SNP 0044.scaffold00158 27765 1 A G scaffold1888 ScafM SNP 0044.scaffold00158 27776 1 G T scaffold1888 ScafM SNP 0044.scaffold00158 27781 1 C T scaffold1888 ScafM SNP 0044.scaffold00158 27788 1 T C scaffold1888 ScafM INDEL 0044.scaffold00158 27794 1 . T scaffold1888 ScafM SNP 0044.scaffold00158 27813 1 G T scaffold1888 ScafM SNP 0044.scaffold00158 27817 1 T C scaffold1888 ScafM SNP 0044.scaffold00158 27820 1 T C scaffold1888 ScafM INDEL 0044.scaffold00158 27825 3 GTA ... scaffold1888 ScafM SNP 0044.scaffold00158 27842 2 GC CT scaffold1888 ScafM SNP 0044.scaffold00158 27862 1 G A scaffold1888 ScafM SNP 0044.scaffold00158 27869 1 C A scaffold1888 ScafM SNP 0044.scaffold00158 27892 1 G T scaffold1888 ScafM SNP 0044.scaffold00158 27899 1 G C scaffold1888 ScafM SNP 0044.scaffold00158 27910 2 AC CT scaffold1888 ScafM SNP 0044.scaffold00158 28037 1 T C scaffold19597 ScafM SNP 0044.scaffold00158 28059 1 C A scaffold19597 ScafM INDEL 0044.scaffold00158 28061 1 G . scaffold19597 ScafM SNP 0044.scaffold00158 28064 2 CC TT scaffold19597 ScafM SNP 0044.scaffold00158 28114 1 C A scaffold19597 ScafM SNP 0044.scaffold00158 28125 1 C G scaffold19597 ScafM SNP 0044.scaffold00158 28132 1 C G scaffold19597 ScafM SNP 0044.scaffold00158 28136 1 A G scaffold19597 ScafM SNP 0044.scaffold00158 28524 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 28545 1 T C scaffold12229 ScafM SNP 0044.scaffold00158 28666 1 C T scaffold12229 ScafM SNP 0044.scaffold00158 28726 1 T C scaffold12229 ScafM INDEL 0044.scaffold00158 28746 7 ....... AGTACTG scaffold12229 ScafM SNP 0044.scaffold00158 28810 1 G T scaffold12229 ScafM SNP 0044.scaffold00158 28842 1 A T scaffold12229 ScafM SNP 0044.scaffold00158 28848 1 T C scaffold12229 ScafM INDEL 0044.scaffold00158 28875 1 . A scaffold12229 ScafM SNP 0044.scaffold00158 28881 1 A C scaffold12229 Both SNP 0044.scaffold00158 28957 1 A C scaffold12229 ScafM SNP 0044.scaffold00158 28977 1 A G scaffold12229 ScafM SNP 0044.scaffold00158 28988 1 A G scaffold12229 ReadM SNP 0044.scaffold00158 29082 1 A G - ReadM SNP 0044.scaffold00158 29622 1 A G - ReadM SNP 0044.scaffold00158 29969 1 G A - ReadM SNP 0044.scaffold00158 30154 1 T C - ReadM SNP 0044.scaffold00158 31032 1 G A - ReadM SNP 0044.scaffold00158 31471 1 T G - ReadM SNP 0044.scaffold00158 32032 1 C T - ReadM SNP 0044.scaffold00158 32227 1 T A - ReadM SNP 0044.scaffold00158 34794 1 A G - ReadM INDEL 0044.scaffold00158 34910 2 .. TT - ReadM SNP 0044.scaffold00158 34959 1 A T - ScafM SNP 0044.scaffold00158 35290 1 C T scaffold26821 ScafM SNP 0044.scaffold00158 35293 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35297 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35304 1 G A scaffold26821 ScafM SNP 0044.scaffold00158 35307 2 GT AG scaffold26821 ScafM SNP 0044.scaffold00158 35330 1 C A scaffold26821 ScafM SNP 0044.scaffold00158 35337 1 C T scaffold26821 ScafM SNP 0044.scaffold00158 35346 1 G A scaffold26821 Both SNP 0044.scaffold00158 35352 1 T A scaffold26821 Both SNP 0044.scaffold00158 35357 1 T A scaffold26821 ScafM SNP 0044.scaffold00158 35366 1 G A scaffold26821 ScafM SNP 0044.scaffold00158 35392 2 GC AT scaffold26821 ScafM SNP 0044.scaffold00158 35401 1 T G scaffold26821 ScafM SNP 0044.scaffold00158 35423 1 C T scaffold26821 ScafM SNP 0044.scaffold00158 35455 2 TT CC scaffold26821 ScafM SNP 0044.scaffold00158 35468 1 T C scaffold26821 ReadM SNP 0044.scaffold00158 35475 1 C G - ScafM INDEL 0044.scaffold00158 35475 3 CCC .TG scaffold26821 ScafM SNP 0044.scaffold00158 35486 1 G T scaffold26821 ScafM SNP 0044.scaffold00158 35494 1 T A scaffold26821 ScafM SNP 0044.scaffold00158 35496 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35508 1 A C scaffold26821 ScafM SNP 0044.scaffold00158 35515 1 T A scaffold26821 ScafM SNP 0044.scaffold00158 35519 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35526 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35529 1 T C scaffold26821 ScafM SNP 0044.scaffold00158 35546 1 G T scaffold26821 ScafM SNP 0044.scaffold00158 35548 1 A G scaffold26821 ScafM SNP 0044.scaffold00158 35560 1 G A scaffold26821 ScafM SNP 0044.scaffold00158 35580 1 T G scaffold26821 ScafM INDEL 0044.scaffold00158 35590 1 T . scaffold26821 Both SNP 0044.scaffold00158 35598 1 T C scaffold26821 ReadM SNP 0044.scaffold00158 35633 1 G A - ReadM SNP 0044.scaffold00158 35786 1 T C - ReadM SNP 0044.scaffold00158 35924 1 A G - ReadM SNP 0044.scaffold00158 35945 1 T C - ReadM SNP 0044.scaffold00158 36023 1 T G - ScafM SNP 0044.scaffold00158 37483 1 A G scaffold28145 ScafM INDEL 0044.scaffold00158 37619 8 ........ AACTTATG scaffold28145 ReadM INDEL 0044.scaffold00158 37847 1 A . - ReadM SNP 0044.scaffold00158 37901 1 T G - ReadM SNP 0044.scaffold00158 37908 1 A G - Both SNP 0044.scaffold00158 37964 1 T A scaffold28145 ScafM SNP 0044.scaffold00158 38078 1 A C scaffold28145 ScafM SNP 0044.scaffold00158 38090 1 C T scaffold28145 ScafM SNP 0044.scaffold00158 38099 1 A T scaffold28145 ScafM SNP 0044.scaffold00158 38101 1 A G scaffold28145 ScafM SNP 0044.scaffold00158 38103 1 T A scaffold28145 ScafM SNP 0044.scaffold00158 38324 1 A T scaffold28145 ScafM SNP 0044.scaffold00158 38424 1 G T scaffold28145 ScafM SNP 0044.scaffold00158 41039 1 A C scaffold28145 ScafM INDEL 0044.scaffold00158 41090 1 . T scaffold28145 ScafM SNP 0044.scaffold00158 41511 1 G A scaffold1245 ScafM SNP 0044.scaffold00158 41514 1 A G scaffold1245 ScafM INDEL 0044.scaffold00158 41796 2 AA .. scaffold1245 ScafM SNP 0044.scaffold00158 41827 1 T C scaffold1245 ScafM SNP 0044.scaffold00158 41833 1 T C scaffold1245 ScafM SNP 0044.scaffold00158 41841 1 G A scaffold1245 ScafM INDEL 0044.scaffold00158 41881 4 .... AAAC scaffold1245 ScafM SNP 0044.scaffold00158 41883 1 G T scaffold1245 ScafM SNP 0044.scaffold00158 41892 1 A G scaffold1245 ScafM SNP 0044.scaffold00158 41909 1 T A scaffold1245 ScafM SNP 0044.scaffold00158 41920 1 A G scaffold1245 ScafM INDEL 0044.scaffold00158 42000 1 . A scaffold1245 ScafM SNP 0044.scaffold00158 42002 1 C T scaffold1245 ScafM SNP 0044.scaffold00158 42008 1 C A scaffold1245 ScafM SNP 0044.scaffold00158 42013 1 T A scaffold1245 ReadM SNP 0044.scaffold00158 42192 1 C T - ReadM SNP 0044.scaffold00158 42220 1 G A - ReadM SNP 0044.scaffold00158 42271 1 A C - ScafM SNP 0044.scaffold00158 42506 1 A G C19695233 Both SNP 0044.scaffold00158 43280 1 T C C19695233 ScafM SNP 0044.scaffold00158 43353 1 C G C19695233 ScafM SNP 0044.scaffold00158 43589 1 T C C19695233 ScafM SNP 0044.scaffold00158 43613 1 C T C19695233 ScafM SNP 0044.scaffold00158 43643 1 C T C19695233 ReadM SNP 0044.scaffold00158 45007 1 A C - ReadM SNP 0044.scaffold00158 46078 1 G C - ReadM SNP 0044.scaffold00158 46288 1 T C - ReadM SNP 0044.scaffold00158 48139 1 A G - Both SNP 0044.scaffold00158 48697 1 C T C19709043 Both SNP 0044.scaffold00158 48940 1 C T C19709043 Both SNP 0044.scaffold00158 49266 1 C T C19709043 ScafM SNP 0044.scaffold00158 49336 1 A C C19709043 Both SNP 0044.scaffold00158 49662 1 G A C19709043 ScafM SNP 0044.scaffold00158 49697 1 C T C19709043 ScafM INDEL 0044.scaffold00158 49813 5 ..... GTACC C19709043 Both SNP 0044.scaffold00158 49848 1 A C C19709043 ReadM SNP 0044.scaffold00158 49944 1 G C - ReadM SNP 0044.scaffold00158 50307 1 T C - ReadM SNP 0044.scaffold00158 50360 1 C G - ReadM SNP 0044.scaffold00158 50469 1 A G - ReadM INDEL 0044.scaffold00158 50480 1 A . - ReadM SNP 0044.scaffold00158 50528 1 A G - ReadM SNP 0044.scaffold00158 50747 1 T C - ReadM SNP 0044.scaffold00158 51162 1 C T - ReadM INDEL 0044.scaffold00158 51835 3 ... CTT - ScafM SNP 0044.scaffold00158 55314 1 C T C19743572 ScafM SNP 0044.scaffold00158 55385 1 G A C19743572 Both SNP 0044.scaffold00158 55631 1 T A C19743572 ReadM INDEL 0044.scaffold00158 56064 1 . T - ReadM INDEL 0044.scaffold00158 56065 1 . A - ScafM SNP 0044.scaffold00158 56416 1 G A C19743572 ScafM SNP 0044.scaffold00158 56505 1 A G C19743572 ScafM SNP 0044.scaffold00158 56557 1 T G C19743572 Both SNP 0044.scaffold00158 56927 1 T C C19743572 ScafM SNP 0044.scaffold00158 57059 1 G A C19743572 ReadM SNP 0044.scaffold00158 57773 1 T C - ScafM INDEL 0044.scaffold00158 58156 3 CCT ... scaffold24054 ScafM SNP 0044.scaffold00158 58391 1 G C scaffold24054 ReadM SNP 0044.scaffold00158 58571 1 G A - ReadM SNP 0044.scaffold00158 58601 1 A G - ReadM SNP 0044.scaffold00158 58652 1 T C - ReadM SNP 0044.scaffold00158 58711 1 C G - ReadM SNP 0044.scaffold00158 58842 1 T C - ReadM SNP 0044.scaffold00158 58963 1 T C - ReadM SNP 0044.scaffold00158 59167 1 T C - ReadM SNP 0044.scaffold00158 59209 1 T C - ReadM SNP 0044.scaffold00158 59469 1 A G - ReadM SNP 0044.scaffold00158 59664 1 T C - ReadM SNP 0044.scaffold00158 60379 1 G C - ReadM SNP 0044.scaffold00158 60903 1 A G - ReadM SNP 0044.scaffold00158 60929 1 A G - ReadM SNP 0044.scaffold00158 61643 1 A G - ReadM SNP 0044.scaffold00158 62300 1 T A - ReadM SNP 0044.scaffold00158 63004 1 A G - ReadM SNP 0044.scaffold00158 63225 1 T A - ScafM SNP 0044.scaffold00158 63263 1 C T scaffold35006 ScafM SNP 0044.scaffold00158 63270 1 G A scaffold35006 Both SNP 0044.scaffold00158 63341 1 T C scaffold35006 ReadM SNP 0044.scaffold00158 63417 1 A G - ReadM SNP 0044.scaffold00158 77388 1 A G - ReadM SNP 0044.scaffold00158 77521 1 G A - ReadM SNP 0044.scaffold00158 77694 1 T C - ReadM SNP 0044.scaffold00158 77868 1 T A - ReadM SNP 0044.scaffold00158 78080 1 C T - ReadM SNP 0044.scaffold00158 78485 1 T C - ReadM SNP 0044.scaffold00158 78699 1 T C - ReadM SNP 0044.scaffold00158 78794 1 A G - ReadM SNP 0044.scaffold00158 78901 1 A G - ReadM SNP 0044.scaffold00158 78988 1 T C - ReadM SNP 0044.scaffold00158 79044 1 T C - ReadM SNP 0044.scaffold00158 79473 1 T C - Both SNP 0044.scaffold00158 79522 1 A T scaffold27704 ScafM SNP 0044.scaffold00158 79718 1 C A scaffold27704 Both SNP 0044.scaffold00158 79748 1 T C scaffold27704 ScafM SNP 0044.scaffold00158 79813 1 C T scaffold27704 Both SNP 0044.scaffold00158 79834 1 A T scaffold27704 Both SNP 0044.scaffold00158 79892 1 C T scaffold27704 ReadM SNP 0044.scaffold00158 79972 1 T C - Both SNP 0044.scaffold00158 80039 1 C T scaffold27704 ScafM INDEL 0044.scaffold00158 80079 2 TT .. scaffold27704 ScafM SNP 0044.scaffold00158 80082 1 T G scaffold27704 ScafM SNP 0044.scaffold00158 80096 1 T G scaffold27704 Both SNP 0044.scaffold00158 80101 1 A C scaffold27704 ReadM SNP 0044.scaffold00158 80358 1 A G - ReadM SNP 0044.scaffold00158 80414 1 T G - ReadM SNP 0044.scaffold00158 80483 1 A C - ScafM INDEL 0044.scaffold00158 80680 1 T . scaffold27704 ScafM INDEL 0044.scaffold00158 80683 1 G . scaffold27704 ScafM INDEL 0044.scaffold00158 80909 1 . T scaffold27704 ScafM SNP 0044.scaffold00158 81065 1 G A scaffold27704 ScafM SNP 0044.scaffold00158 81071 1 G T scaffold27704 ScafM SNP 0044.scaffold00158 81128 1 G T scaffold27704 ScafM INDEL 0044.scaffold00158 81267 3 ... TTG scaffold27704 ReadM SNP 0044.scaffold00158 81333 1 A C - ScafM INDEL 0044.scaffold00158 84678 1 A . scaffold27704 ScafM SNP 0044.scaffold00158 84810 1 G A scaffold27704 ScafM SNP 0044.scaffold00158 84850 1 A T scaffold27704 ScafM SNP 0044.scaffold00158 84907 1 A G scaffold27704 ScafM SNP 0044.scaffold00158 84950 1 C A scaffold27704 ScafM SNP 0044.scaffold00158 85342 1 T G scaffold27704 ScafM SNP 0044.scaffold00158 85357 1 T C scaffold27704 ScafM SNP 0044.scaffold00158 85435 1 C T scaffold27704 ScafM INDEL 0044.scaffold00158 85863 2 .. AT scaffold27704 ScafM INDEL 0044.scaffold00158 85865 4 .... CGGG scaffold27704 Both SNP 0044.scaffold00158 86215 1 A C scaffold27704 ScafM SNP 0044.scaffold00158 86260 1 C T scaffold27704 Both SNP 0044.scaffold00158 86376 1 A G scaffold27704 ScafM SNP 0044.scaffold00158 86398 1 A G scaffold27704 ScafM INDEL 0044.scaffold00158 86458 20 .................... TAAAGGTTAATACATGAAAC scaffold27704 ReadM SNP 0044.scaffold00158 86459 1 C T - ScafM INDEL 0044.scaffold00158 86463 3 ... ACT scaffold27704 ScafM INDEL 0044.scaffold00158 86465 1 . G scaffold27704 ReadM SNP 0044.scaffold00158 86466 1 C T - ScafM INDEL 0044.scaffold00158 86466 15 ............... TGAGTAATAAAGGTT scaffold27704 Both SNP 0044.scaffold00158 86618 1 A T scaffold27704 ScafM INDEL 0044.scaffold00158 86752 1 . T scaffold27704 ScafM SNP 0044.scaffold00158 86913 1 T A scaffold27704 ReadM INDEL 0044.scaffold00158 87060 1 G . - ScafM INDEL 0044.scaffold00158 87060 2 GT .A scaffold27704 ReadM INDEL 0044.scaffold00158 87061 1 T . - ReadM SNP 0044.scaffold00158 87313 1 A C - ReadM INDEL 0044.scaffold00158 87505 1 . G - ScafM SNP 0044.scaffold00158 87766 1 A T scaffold27704 Both SNP 0044.scaffold00158 87847 1 T C scaffold27704 Both SNP 0044.scaffold00158 88126 1 G T scaffold27704 Both SNP 0044.scaffold00158 88174 1 G A scaffold27704 ScafM SNP 0044.scaffold00158 88202 1 C A scaffold27704 ScafM SNP 0044.scaffold00158 88267 1 C G scaffold27704 Both SNP 0044.scaffold00158 88313 1 G A scaffold27704 Both SNP 0044.scaffold00158 88338 1 G A scaffold27704 ScafM INDEL 0044.scaffold00158 88346 1 A . scaffold27704 ScafM INDEL 0044.scaffold00158 88440 9 ......... GTCCTGTTG scaffold27704 ScafM SNP 0044.scaffold00158 88481 1 A C scaffold27704 ScafM SNP 0044.scaffold00158 88485 1 A C scaffold27704 Both SNP 0044.scaffold00158 88505 1 C G scaffold27704 Both SNP 0044.scaffold00158 88512 1 A G scaffold27704 Both SNP 0044.scaffold00158 88573 1 T A scaffold27704 ScafM SNP 0044.scaffold00158 88610 1 C T scaffold27704 ScafM INDEL 0044.scaffold00158 88621 1 . A scaffold27704 ScafM SNP 0044.scaffold00158 88627 1 T G scaffold27704 ScafM INDEL 0044.scaffold00158 88634 4 TTTT .... scaffold27704 ScafM SNP 0044.scaffold00158 88641 2 TA AC scaffold27704 ScafM SNP 0044.scaffold00158 88653 1 A G scaffold27704 ScafM SNP 0044.scaffold00158 88688 1 C A scaffold27704 ScafM INDEL 0044.scaffold00158 88729 7 AACTGAC ....... scaffold27704 ScafM SNP 0044.scaffold00158 88738 1 C T scaffold27704 ScafM SNP 0044.scaffold00158 88760 1 G C scaffold27704 ScafM SNP 0044.scaffold00158 88764 1 A C scaffold27704 ScafM INDEL 0044.scaffold00158 88771 1 . C scaffold27704 ScafM SNP 0044.scaffold00158 88774 1 A T scaffold27704 ScafM INDEL 0044.scaffold00158 88775 2 .. GA scaffold27704 ScafM SNP 0044.scaffold00158 88779 2 CG AT scaffold27704 ScafM SNP 0044.scaffold00158 88787 1 G A scaffold27704 ScafM INDEL 0044.scaffold00158 89235 1 T . scaffold11844 ReadM SNP 0044.scaffold00158 89308 1 G T - ReadM SNP 0044.scaffold00158 89347 1 A G - ReadM SNP 0044.scaffold00158 89362 1 C T - ReadM SNP 0044.scaffold00158 89404 1 A G - ReadM SNP 0044.scaffold00158 89453 1 G C - ReadM SNP 0044.scaffold00158 89623 1 T C - ReadM SNP 0044.scaffold00158 90241 1 C G - ReadM SNP 0044.scaffold00158 90377 1 A G - ScafM SNP 0044.scaffold00158 90475 1 T C scaffold11844 ScafM SNP 0044.scaffold00158 90512 1 C T scaffold11844 ReadM SNP 0044.scaffold00158 90873 1 A G - ScafM SNP 0044.scaffold00158 91022 1 T A scaffold11844 ReadM SNP 0044.scaffold00158 91176 1 A T - ReadM SNP 0044.scaffold00158 91203 1 G A - ReadM SNP 0044.scaffold00158 91520 1 T G - ScafM SNP 0044.scaffold00158 91601 1 A G scaffold11844 ScafM SNP 0044.scaffold00158 91604 1 G C scaffold11844 ScafM SNP 0044.scaffold00158 91610 1 C A scaffold11844 ScafM SNP 0044.scaffold00158 91623 1 A G scaffold11844 ScafM SNP 0044.scaffold00158 91640 1 C T scaffold11844 ScafM SNP 0044.scaffold00158 91647 1 A T scaffold11844 ScafM INDEL 0044.scaffold00158 91749 4 .... CCCT scaffold11844 Both SNP 0044.scaffold00158 91803 1 G A scaffold11844 ScafM INDEL 0044.scaffold00158 91840 1 . A scaffold11844 ScafM SNP 0044.scaffold00158 91848 1 T C scaffold11844 Both INDEL 0044.scaffold00158 91896 2 .. CG scaffold11844 Both SNP 0044.scaffold00158 91915 1 T G scaffold11844 ScafM INDEL 0044.scaffold00158 92022 3 ... TAT scaffold11844 ScafM SNP 0044.scaffold00158 92026 1 G T scaffold11844 ScafM SNP 0044.scaffold00158 92060 1 A T scaffold11844 ScafM SNP 0044.scaffold00158 92142 1 C G scaffold11844 Both SNP 0044.scaffold00158 92171 1 C T scaffold11844 Both SNP 0044.scaffold00158 92180 1 C T scaffold11844 Both SNP 0044.scaffold00158 92248 1 T C scaffold11844 Both SNP 0044.scaffold00158 92261 1 A G scaffold11844 Both SNP 0044.scaffold00158 92353 1 T G scaffold11844 Both INDEL 0044.scaffold00158 92453 1 T . scaffold11844 Both SNP 0044.scaffold00158 92465 1 A G scaffold11844 ReadM INDEL 0044.scaffold00158 92733 1 T . - ReadM SNP 0044.scaffold00158 92876 1 T C - ReadM SNP 0044.scaffold00158 93005 1 T C - Both SNP 0044.scaffold00158 93179 1 A T scaffold11844 ReadM SNP 0044.scaffold00158 93244 1 C T - ReadM SNP 0044.scaffold00158 93267 1 C T - ScafM INDEL 0044.scaffold00158 93465 4 .... CGAT scaffold11844 ScafM SNP 0044.scaffold00158 93484 1 C T scaffold11844 ScafM SNP 0044.scaffold00158 93504 1 A G scaffold11844 ScafM SNP 0044.scaffold00158 93506 1 A G scaffold11844 ScafM INDEL 0044.scaffold00158 93509 5 TCAAA ..... scaffold11844 Both SNP 0044.scaffold00158 93578 1 T C scaffold11844 Both SNP 0044.scaffold00158 93774 1 T G scaffold11844 Both SNP 0044.scaffold00158 93807 1 A G scaffold11844 Both SNP 0044.scaffold00158 93818 1 G A scaffold11844 Both SNP 0044.scaffold00158 93915 1 A G scaffold11844 Both SNP 0044.scaffold00158 93978 1 T C scaffold11844 Both SNP 0044.scaffold00158 94100 1 A C scaffold11844 Both SNP 0044.scaffold00158 94131 1 C G scaffold11844 Both SNP 0044.scaffold00158 94210 1 C A scaffold11844 Both SNP 0044.scaffold00158 94468 1 T C scaffold11844 Both SNP 0044.scaffold00158 94519 1 C T scaffold11844 Both SNP 0044.scaffold00158 94531 1 C G scaffold11844 ScafM SNP 0044.scaffold00158 94569 1 A G scaffold11844 ScafM SNP 0044.scaffold00158 94574 1 A T scaffold11844 ScafM SNP 0044.scaffold00158 94615 1 G A scaffold11844 ScafM SNP 0044.scaffold00158 94662 1 C T scaffold11844 Both SNP 0044.scaffold00158 94756 1 G C scaffold11844 ScafM SNP 0044.scaffold00158 94777 1 C T scaffold11844 ScafM SNP 0044.scaffold00158 94790 1 A C scaffold11844 ScafM SNP 0044.scaffold00158 94804 1 T C scaffold11844 ScafM SNP 0044.scaffold00158 94821 1 C A scaffold11844 ReadM SNP 0044.scaffold00158 95054 1 C T - ReadM SNP 0044.scaffold00158 95086 1 A G - ReadM SNP 0044.scaffold00158 95092 1 A C - ReadM SNP 0044.scaffold00158 95138 1 C T - ReadM SNP 0044.scaffold00158 95245 1 T A - ReadM SNP 0044.scaffold00158 95414 1 T C - ReadM SNP 0044.scaffold00158 95553 1 G A - ReadM INDEL 0044.scaffold00158 95673 1 A . - ReadM SNP 0044.scaffold00158 95686 1 T G - ReadM SNP 0044.scaffold00158 95719 1 G T - ReadM SNP 0044.scaffold00158 95743 1 T C - ReadM SNP 0044.scaffold00158 96049 1 A G - ReadM SNP 0044.scaffold00158 96097 1 G C - ReadM SNP 0044.scaffold00158 96148 1 T C - Both SNP 0044.scaffold00158 96532 1 T A scaffold11844 Both SNP 0044.scaffold00158 96572 1 G A scaffold11844 Both SNP 0044.scaffold00158 96825 1 A C scaffold11844 Both SNP 0044.scaffold00158 96830 1 C T scaffold11844 Both SNP 0044.scaffold00158 96896 1 T C scaffold11844 Both SNP 0044.scaffold00158 97015 1 C A scaffold11844 Both SNP 0044.scaffold00158 97029 1 T C scaffold11844 Both SNP 0044.scaffold00158 97080 1 A T scaffold11844 Both SNP 0044.scaffold00158 97154 1 A G scaffold11844 Both SNP 0044.scaffold00158 97262 1 A G scaffold11844 Both SNP 0044.scaffold00158 97324 1 A T scaffold11844 ReadM SNP 0044.scaffold00158 97366 1 C G - ReadM SNP 0044.scaffold00158 97513 1 G A - ReadM SNP 0044.scaffold00158 97605 1 C A - ReadM SNP 0044.scaffold00158 97624 1 C A - ReadM SNP 0044.scaffold00158 97692 1 G A - ReadM SNP 0044.scaffold00158 97944 1 A G - ReadM SNP 0044.scaffold00158 97990 1 T C - ReadM SNP 0044.scaffold00158 98208 1 A C - ReadM SNP 0044.scaffold00158 98223 1 C A - ReadM SNP 0044.scaffold00158 98473 1 C T - ReadM SNP 0044.scaffold00158 98650 1 G A - ReadM SNP 0044.scaffold00158 98730 1 T C - ReadM SNP 0044.scaffold00158 98753 1 A C - ReadM SNP 0044.scaffold00158 98925 1 G C - ReadM SNP 0044.scaffold00158 99059 1 A G - ReadM SNP 0044.scaffold00158 99142 1 G T - ReadM SNP 0044.scaffold00158 99190 1 T G - ReadM SNP 0044.scaffold00158 99203 1 T A - ReadM SNP 0044.scaffold00158 99297 1 A G - ReadM SNP 0044.scaffold00158 99319 1 T A - ReadM SNP 0044.scaffold00158 99380 1 A C - ReadM SNP 0044.scaffold00158 99538 1 A G - ReadM SNP 0044.scaffold00158 99631 1 C T - ReadM SNP 0044.scaffold00158 99691 1 C A - ReadM SNP 0044.scaffold00158 99818 1 T C - ReadM INDEL 0044.scaffold00158 99873 1 . G - ReadM SNP 0044.scaffold00158 99890 1 A C - ReadM SNP 0044.scaffold00158 99944 1 C A - ReadM SNP 0044.scaffold00158 99961 1 A G - ReadM SNP 0044.scaffold00158 100051 1 T G - ReadM SNP 0044.scaffold00158 100454 1 T A - ReadM SNP 0044.scaffold00158 100475 1 G A - ReadM SNP 0044.scaffold00158 100658 1 T C - ScafM SNP 0044.scaffold00158 101754 1 C T scaffold11844 Both SNP 0044.scaffold00158 102048 1 T C scaffold11844 Both SNP 0044.scaffold00158 102147 1 A T scaffold11844 Both SNP 0044.scaffold00158 102170 1 T G scaffold11844 ScafM SNP 0044.scaffold00158 102257 1 T C scaffold11844 ScafM SNP 0044.scaffold00158 102288 2 GT AG scaffold11844 ScafM SNP 0044.scaffold00158 102297 1 A T scaffold11844 Both SNP 0044.scaffold00158 102325 1 G A scaffold11844 Both SNP 0044.scaffold00158 102589 1 T C scaffold11844 ScafM SNP 0044.scaffold00158 102639 1 C G scaffold11844 Both SNP 0044.scaffold00158 102746 1 T C scaffold11844 Both SNP 0044.scaffold00158 102754 1 C T scaffold11844 Both SNP 0044.scaffold00158 102887 1 T C scaffold11844 ReadM SNP 0044.scaffold00158 103154 1 A G - Both SNP 0044.scaffold00158 103319 1 G T scaffold11844 Both SNP 0044.scaffold00158 103704 1 G A scaffold11844 ScafM SNP 0044.scaffold00158 103815 1 T A scaffold11844 ScafM SNP 0044.scaffold00158 103832 1 C T scaffold11844 ScafM SNP 0044.scaffold00158 103919 1 A C scaffold11844 ScafM SNP 0044.scaffold00158 103921 1 G A scaffold11844 Both SNP 0044.scaffold00158 103990 1 C G scaffold11844 Both SNP 0044.scaffold00158 104070 1 G C scaffold11844 Both SNP 0044.scaffold00158 104099 1 C G scaffold11844 ScafM INDEL 0044.scaffold00158 104120 1 . T scaffold11844 ScafM INDEL 0044.scaffold00158 104126 3 TTT ... scaffold11844 ScafM SNP 0044.scaffold00158 104174 1 C T scaffold11844 ScafM SNP 0044.scaffold00158 104224 1 T A scaffold11844 ReadM SNP 0044.scaffold00158 104355 1 A C - ReadM SNP 0044.scaffold00158 104364 1 C T - ReadM SNP 0044.scaffold00158 104464 1 T A - ReadM SNP 0044.scaffold00158 104486 1 T C - ReadM SNP 0044.scaffold00158 104521 1 C G - ReadM SNP 0044.scaffold00158 104592 1 A C - ReadM INDEL 0044.scaffold00158 104657 1 A . - ReadM SNP 0044.scaffold00158 104678 1 G A - ReadM SNP 0044.scaffold00158 104766 1 A G - ReadM SNP 0044.scaffold00158 104773 1 A C - ReadM SNP 0044.scaffold00158 104968 1 G A - Both SNP 0044.scaffold00158 105237 1 G C scaffold11844 ScafM SNP 0044.scaffold00158 105388 1 G A scaffold11844 Both SNP 0044.scaffold00158 105390 1 G C scaffold11844 Both SNP 0044.scaffold00158 105482 1 T G scaffold11844 Both SNP 0044.scaffold00158 105515 1 C T scaffold11844 Both SNP 0044.scaffold00158 105545 1 T G scaffold11844 ReadM SNP 0044.scaffold00158 105615 1 C G - ReadM SNP 0044.scaffold00158 105706 1 A G - ReadM SNP 0044.scaffold00158 105734 1 C T - ReadM SNP 0044.scaffold00158 105789 1 A G - Both SNP 0044.scaffold00158 105814 1 G A scaffold11844 ScafM SNP 0044.scaffold00158 105845 1 A G scaffold11844 ScafM INDEL 0044.scaffold00158 105859 1 . A scaffold11844 ScafM SNP 0044.scaffold00158 105861 1 A C scaffold11844 ScafM SNP 0044.scaffold00158 105863 2 AA CG scaffold11844 ScafM INDEL 0044.scaffold00158 105867 1 T . scaffold11844 ScafM INDEL 0044.scaffold00158 105869 3 GGT ... scaffold11844 ScafM INDEL 0044.scaffold00158 105875 4 CTAC .... scaffold11844 ScafM INDEL 0044.scaffold00158 105881 5 CGTTT ..... scaffold11844 ScafM INDEL 0044.scaffold00158 105948 25 AGGGAGTAACAAAAACGACCTCTTG ......................... scaffold11844 Both SNP 0044.scaffold00158 106027 1 T C scaffold11844 Both SNP 0044.scaffold00158 106040 1 T C scaffold11844 Both SNP 0044.scaffold00158 106091 1 G A scaffold11844 Both INDEL 0044.scaffold00158 106236 1 . T scaffold11844 Both INDEL 0044.scaffold00158 106282 1 T . scaffold11844 Both SNP 0044.scaffold00158 106315 1 T C scaffold11844 Both SNP 0044.scaffold00158 106439 1 C T scaffold11844 Both SNP 0044.scaffold00158 106454 1 A G scaffold11844 Both SNP 0044.scaffold00158 106462 1 A C scaffold11844 Both SNP 0044.scaffold00158 106504 1 A G scaffold11844 Both SNP 0044.scaffold00158 106525 1 A G scaffold11844 ScafM SNP 0044.scaffold00158 106605 1 T G scaffold11844 Both SNP 0044.scaffold00158 106639 1 T A scaffold11844 ScafM SNP 0044.scaffold00158 106824 1 G A scaffold11844 Both SNP 0044.scaffold00158 106865 1 C T scaffold11844 Both SNP 0044.scaffold00158 106917 1 C G scaffold11844 Both SNP 0044.scaffold00158 106990 1 G A scaffold11844 Both SNP 0044.scaffold00158 107131 1 A G scaffold11844 Both SNP 0044.scaffold00158 119777 1 A G scaffold19250 ReadM SNP 0044.scaffold00158 119887 1 G A - ReadM SNP 0044.scaffold00158 119932 1 C T - ReadM SNP 0044.scaffold00158 119968 1 T C - ReadM SNP 0044.scaffold00158 119993 1 A G - ReadM SNP 0044.scaffold00158 120073 1 A T - ReadM SNP 0044.scaffold00158 120092 1 C G - Both SNP 0044.scaffold00158 120301 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 120321 1 G A scaffold19250 ScafM INDEL 0044.scaffold00158 120354 15 GACTTCGTCTCCGGC ............... scaffold19250 ScafM SNP 0044.scaffold00158 120385 1 C A scaffold19250 Both SNP 0044.scaffold00158 120427 1 T A scaffold19250 Both SNP 0044.scaffold00158 120442 1 A G scaffold19250 Both SNP 0044.scaffold00158 120513 1 T C scaffold19250 Both SNP 0044.scaffold00158 120542 1 T G scaffold19250 Both SNP 0044.scaffold00158 120618 1 C A scaffold19250 Both SNP 0044.scaffold00158 120637 1 C T scaffold19250 Both INDEL 0044.scaffold00158 120643 1 . T scaffold19250 ScafM SNP 0044.scaffold00158 120732 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 120749 1 T A scaffold19250 ScafM SNP 0044.scaffold00158 120751 1 T A scaffold19250 ScafM SNP 0044.scaffold00158 120755 1 G T scaffold19250 ScafM SNP 0044.scaffold00158 120886 1 T C scaffold19250 ReadM SNP 0044.scaffold00158 121187 1 T C - ReadM SNP 0044.scaffold00158 121251 1 C T - ScafM SNP 0044.scaffold00158 121271 1 G A scaffold19250 Both SNP 0044.scaffold00158 121527 1 G C scaffold19250 Both INDEL 0044.scaffold00158 121547 1 T . scaffold19250 Both SNP 0044.scaffold00158 121582 1 G C scaffold19250 Both SNP 0044.scaffold00158 121624 1 A T scaffold19250 Both SNP 0044.scaffold00158 121846 1 G A scaffold19250 ScafM SNP 0044.scaffold00158 121893 1 A G scaffold19250 Both SNP 0044.scaffold00158 121969 1 G T scaffold19250 ScafM INDEL 0044.scaffold00158 122006 8 ........ ATTTCTTG scaffold19250 Both SNP 0044.scaffold00158 122054 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 122216 1 A T scaffold19250 ReadM SNP 0044.scaffold00158 122293 1 T C - Both SNP 0044.scaffold00158 122391 1 G A scaffold19250 Both SNP 0044.scaffold00158 122410 1 A G scaffold19250 Both SNP 0044.scaffold00158 122500 1 T C scaffold19250 ScafM INDEL 0044.scaffold00158 122599 2 AG .. scaffold19250 ScafM INDEL 0044.scaffold00158 122614 1 . T scaffold19250 Both SNP 0044.scaffold00158 122694 1 G A scaffold19250 Both SNP 0044.scaffold00158 122713 1 C G scaffold19250 Both SNP 0044.scaffold00158 122759 1 A G scaffold19250 Both SNP 0044.scaffold00158 122873 1 T C scaffold19250 Both SNP 0044.scaffold00158 123054 1 C G scaffold19250 Both SNP 0044.scaffold00158 123265 1 G A scaffold19250 Both SNP 0044.scaffold00158 123284 1 C T scaffold19250 Both SNP 0044.scaffold00158 123403 1 A G scaffold19250 Both SNP 0044.scaffold00158 123420 1 G A scaffold19250 Both SNP 0044.scaffold00158 123487 1 G C scaffold19250 ScafM INDEL 0044.scaffold00158 123582 1 T . scaffold19250 ScafM SNP 0044.scaffold00158 123590 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 123604 1 A G scaffold19250 Both SNP 0044.scaffold00158 123611 1 G A scaffold19250 Both SNP 0044.scaffold00158 123725 1 C T scaffold19250 Both SNP 0044.scaffold00158 123747 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 123882 1 C T scaffold19250 ScafM SNP 0044.scaffold00158 123982 1 G T scaffold19250 ScafM SNP 0044.scaffold00158 123987 1 G T scaffold19250 Both SNP 0044.scaffold00158 124006 1 T C scaffold19250 Both SNP 0044.scaffold00158 124036 1 G C scaffold19250 Both SNP 0044.scaffold00158 124096 1 C T scaffold19250 ScafM SNP 0044.scaffold00158 124160 1 T A scaffold19250 Both SNP 0044.scaffold00158 124212 1 A C scaffold19250 ScafM SNP 0044.scaffold00158 124226 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 124273 1 C T scaffold19250 Both SNP 0044.scaffold00158 124293 1 C A scaffold19250 ScafM SNP 0044.scaffold00158 124325 1 A C scaffold19250 ScafM SNP 0044.scaffold00158 124429 1 C T scaffold19250 Both SNP 0044.scaffold00158 124549 1 T C scaffold19250 Both SNP 0044.scaffold00158 124719 1 C T scaffold19250 ScafM INDEL 0044.scaffold00158 124756 2 .. AA scaffold19250 ScafM SNP 0044.scaffold00158 124775 1 C T scaffold19250 ScafM INDEL 0044.scaffold00158 124781 4 .... CGAA scaffold19250 ScafM SNP 0044.scaffold00158 124824 1 G A scaffold19250 ScafM SNP 0044.scaffold00158 124853 1 T C scaffold19250 ScafM INDEL 0044.scaffold00158 124979 1 A . scaffold19250 ScafM SNP 0044.scaffold00158 124988 1 T A scaffold19250 Both SNP 0044.scaffold00158 125028 1 A G scaffold19250 Both SNP 0044.scaffold00158 125039 1 C T scaffold19250 ReadM SNP 0044.scaffold00158 125523 1 G T - ReadM SNP 0044.scaffold00158 125551 1 T C - ReadM SNP 0044.scaffold00158 125557 1 C T - ScafM SNP 0044.scaffold00158 125623 1 G A scaffold19250 ScafM SNP 0044.scaffold00158 125696 1 G C scaffold19250 ScafM SNP 0044.scaffold00158 125699 1 G T scaffold19250 ScafM SNP 0044.scaffold00158 125720 1 T A scaffold19250 ScafM SNP 0044.scaffold00158 125723 1 T A scaffold19250 ScafM SNP 0044.scaffold00158 125774 1 G A scaffold19250 ReadM SNP 0044.scaffold00158 125978 1 A T - ReadM SNP 0044.scaffold00158 126040 1 T C - ReadM INDEL 0044.scaffold00158 126056 2 TA .. - Both SNP 0044.scaffold00158 126231 1 T A scaffold19250 Both SNP 0044.scaffold00158 126253 1 C A scaffold19250 ReadM SNP 0044.scaffold00158 126341 1 C T - ReadM SNP 0044.scaffold00158 126503 1 A T - ReadM SNP 0044.scaffold00158 126509 1 C T - Both SNP 0044.scaffold00158 126529 1 T G scaffold19250 ReadM SNP 0044.scaffold00158 126626 1 A G - ReadM SNP 0044.scaffold00158 126747 1 A C - ReadM SNP 0044.scaffold00158 126790 1 G C - ReadM SNP 0044.scaffold00158 126815 1 A G - ReadM SNP 0044.scaffold00158 126885 1 C A - ScafM INDEL 0044.scaffold00158 127081 1 T . scaffold19250 ScafM INDEL 0044.scaffold00158 127138 1 . A scaffold19250 ScafM SNP 0044.scaffold00158 127256 1 G C scaffold19250 ScafM SNP 0044.scaffold00158 127260 1 G C scaffold19250 ScafM SNP 0044.scaffold00158 127270 1 C T scaffold19250 ScafM INDEL 0044.scaffold00158 127356 2 AA .C scaffold19250 ScafM SNP 0044.scaffold00158 127448 1 T C scaffold19250 ScafM INDEL 0044.scaffold00158 127897 2 TA .. scaffold19250 ScafM SNP 0044.scaffold00158 127932 1 G T scaffold19250 ScafM SNP 0044.scaffold00158 128024 1 C A scaffold19250 ScafM SNP 0044.scaffold00158 128056 1 T C scaffold19250 ScafM INDEL 0044.scaffold00158 128158 5 ..... TATGG scaffold19250 Both SNP 0044.scaffold00158 128305 1 A G scaffold19250 ReadM SNP 0044.scaffold00158 128445 1 A T - ReadM SNP 0044.scaffold00158 128558 1 G T - ReadM SNP 0044.scaffold00158 128591 1 A G - ReadM SNP 0044.scaffold00158 128595 1 T C - ReadM INDEL 0044.scaffold00158 128651 1 T . - ScafM SNP 0044.scaffold00158 128763 1 G A scaffold19250 ScafM SNP 0044.scaffold00158 128844 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 128859 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 128862 1 A T scaffold19250 ScafM SNP 0044.scaffold00158 128886 1 G A scaffold19250 Both SNP 0044.scaffold00158 128921 1 A G scaffold19250 Both SNP 0044.scaffold00158 129253 1 T C scaffold19250 Both SNP 0044.scaffold00158 129281 1 C T scaffold19250 Both SNP 0044.scaffold00158 129304 1 G A scaffold19250 Both SNP 0044.scaffold00158 129323 1 G A scaffold19250 ScafM SNP 0044.scaffold00158 129563 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 129586 1 A C scaffold19250 Both INDEL 0044.scaffold00158 129666 2 CT .. scaffold19250 Both SNP 0044.scaffold00158 129710 1 C G scaffold19250 ScafM SNP 0044.scaffold00158 129777 2 GC TT scaffold19250 ScafM INDEL 0044.scaffold00158 129780 2 GT .. scaffold19250 Both SNP 0044.scaffold00158 129846 1 A G scaffold19250 Both SNP 0044.scaffold00158 129998 1 C G scaffold19250 ScafM SNP 0044.scaffold00158 130062 1 G C scaffold19250 Both SNP 0044.scaffold00158 130251 1 A C scaffold19250 Both SNP 0044.scaffold00158 130314 1 C A scaffold19250 ReadM SNP 0044.scaffold00158 130351 1 A G - ReadM SNP 0044.scaffold00158 130381 1 A G - ReadM SNP 0044.scaffold00158 130511 1 T C - Both SNP 0044.scaffold00158 130695 1 A G scaffold19250 Both SNP 0044.scaffold00158 130712 1 A C scaffold19250 Both SNP 0044.scaffold00158 130732 1 C T scaffold19250 Both SNP 0044.scaffold00158 130900 1 G A scaffold19250 ScafM INDEL 0044.scaffold00158 130923 2 .. AT scaffold19250 ScafM SNP 0044.scaffold00158 130950 1 T G scaffold19250 ScafM INDEL 0044.scaffold00158 131025 13 ATCGCCGTTTTCT ............. scaffold19250 ScafM INDEL 0044.scaffold00158 131039 1 C . scaffold19250 ScafM SNP 0044.scaffold00158 131041 1 G T scaffold19250 Both SNP 0044.scaffold00158 131229 1 C G scaffold19250 Both SNP 0044.scaffold00158 131259 1 T C scaffold19250 ReadM SNP 0044.scaffold00158 131381 1 G A - Both SNP 0044.scaffold00158 131540 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 131560 2 TT CC scaffold19250 Both SNP 0044.scaffold00158 131599 1 C A scaffold19250 Both SNP 0044.scaffold00158 131647 1 G C scaffold19250 ScafM SNP 0044.scaffold00158 131699 1 C T scaffold19250 ScafM SNP 0044.scaffold00158 131730 1 C G scaffold19250 ReadM SNP 0044.scaffold00158 131836 1 T G - ReadM INDEL 0044.scaffold00158 131889 1 T . - ReadM SNP 0044.scaffold00158 132028 1 C T - ReadM SNP 0044.scaffold00158 132187 1 G A - ReadM SNP 0044.scaffold00158 132196 1 T A - ReadM SNP 0044.scaffold00158 132204 1 C T - ReadM SNP 0044.scaffold00158 132446 1 A G - ScafM SNP 0044.scaffold00158 132619 1 T G scaffold19250 ScafM SNP 0044.scaffold00158 132625 1 T G scaffold19250 ScafM SNP 0044.scaffold00158 132642 1 T C scaffold19250 ScafM SNP 0044.scaffold00158 132650 1 T A scaffold19250 Both SNP 0044.scaffold00158 132682 1 A G scaffold19250 ScafM SNP 0044.scaffold00158 132778 1 T C scaffold19250 Both SNP 0044.scaffold00158 132945 1 G A scaffold19250 Both SNP 0044.scaffold00158 133050 1 G A scaffold19250 Both INDEL 0044.scaffold00158 133163 1 . T scaffold19250 ScafM SNP 0044.scaffold00158 133920 1 C T scaffold19250 ScafM SNP 0044.scaffold00158 136728 1 A G scaffold8035 ScafM SNP 0044.scaffold00158 136749 1 T G scaffold8035 ScafM SNP 0044.scaffold00158 136777 1 G A scaffold8035 ScafM SNP 0044.scaffold00158 136786 1 G A scaffold8035 ScafM SNP 0044.scaffold00158 136795 1 A G scaffold8035 ScafM SNP 0044.scaffold00158 136855 1 A G scaffold8035 ScafM SNP 0044.scaffold00158 136894 1 T C scaffold8035 ScafM SNP 0044.scaffold00158 136972 1 T A scaffold8035 ScafM SNP 0044.scaffold00158 136993 1 C A scaffold8035 ScafM SNP 0044.scaffold00158 137023 1 T G scaffold8035 ScafM SNP 0044.scaffold00158 137056 1 A G scaffold8035 ScafM SNP 0044.scaffold00158 137136 1 T A scaffold8035 ScafM SNP 0044.scaffold00158 137149 1 A T scaffold8035 ScafM SNP 0044.scaffold00158 137193 1 A T scaffold8035 ScafM SNP 0044.scaffold00158 137258 1 C T scaffold8035 ReadM SNP 0044.scaffold00158 137870 1 C T - ReadM SNP 0044.scaffold00158 137929 1 T C - ReadM SNP 0044.scaffold00158 138067 1 A C - ReadM SNP 0044.scaffold00158 138500 1 T C - ReadM SNP 0044.scaffold00158 138604 1 G T - ReadM SNP 0044.scaffold00158 138700 1 C T - ReadM SNP 0044.scaffold00158 138713 1 C T - ReadM SNP 0044.scaffold00158 138783 1 C T - ReadM SNP 0044.scaffold00158 138825 1 G C - ReadM SNP 0044.scaffold00158 138844 1 T C - ReadM SNP 0044.scaffold00158 138886 1 A G - ReadM SNP 0044.scaffold00158 138998 1 A G - ReadM SNP 0044.scaffold00158 139036 1 T C - ReadM SNP 0044.scaffold00158 139085 1 G A - Both SNP 0044.scaffold00158 139155 1 G A scaffold12764 ScafM SNP 0044.scaffold00158 139348 1 A C scaffold12764 ScafM INDEL 0044.scaffold00158 139362 2 .. AG scaffold12764 Both INDEL 0044.scaffold00158 139423 3 ... ATG scaffold12764 Both SNP 0044.scaffold00158 139512 1 C T scaffold12764 ScafM SNP 0044.scaffold00158 140470 1 A G scaffold12764 ScafM SNP 0044.scaffold00158 140559 1 A G scaffold12764 ScafM INDEL 0044.scaffold00158 140612 3 ... AGA scaffold12764 ScafM SNP 0044.scaffold00158 140708 1 G A scaffold12764 ScafM SNP 0044.scaffold00158 140755 1 A C scaffold12764 ScafM SNP 0044.scaffold00158 140785 1 A G scaffold12764 ReadM SNP 0044.scaffold00158 141685 1 A G - ReadM SNP 0044.scaffold00158 141958 1 A C - ReadM SNP 0044.scaffold00158 141975 1 T C - ReadM SNP 0044.scaffold00158 142038 1 G C - ReadM SNP 0044.scaffold00158 142054 1 C A - ReadM SNP 0044.scaffold00158 142094 1 A G - ReadM SNP 0044.scaffold00158 142121 1 A G - ReadM SNP 0044.scaffold00158 142129 1 G A - ReadM SNP 0044.scaffold00158 142195 1 C T - ReadM SNP 0044.scaffold00158 142201 1 G A - Both SNP 0044.scaffold00158 142319 1 T C scaffold16697 Both SNP 0044.scaffold00158 142365 1 C T scaffold16697 Both SNP 0044.scaffold00158 142419 1 C G scaffold16697 Both SNP 0044.scaffold00158 142439 1 T C scaffold16697 Both SNP 0044.scaffold00158 142534 1 A G scaffold16697 Both SNP 0044.scaffold00158 142569 1 C T scaffold16697 ScafM SNP 0044.scaffold00158 142604 1 A T scaffold16697 Both SNP 0044.scaffold00158 142643 1 G A scaffold16697 Both SNP 0044.scaffold00158 142691 1 A T scaffold16697 ReadM INDEL 0044.scaffold00158 142753 1 . T - ReadM SNP 0044.scaffold00158 142924 1 A G - ReadM SNP 0044.scaffold00158 143026 1 G T - ReadM SNP 0044.scaffold00158 143045 1 C T - Both SNP 0044.scaffold00158 143419 1 T C scaffold16697 Both SNP 0044.scaffold00158 143515 1 T G scaffold16697 Both SNP 0044.scaffold00158 143595 1 G C scaffold16697 ReadM SNP 0044.scaffold00158 143624 1 G A - ReadM SNP 0044.scaffold00158 143647 1 A G - ReadM SNP 0044.scaffold00158 143804 1 C G - ReadM SNP 0044.scaffold00158 143842 1 G A - Both SNP 0044.scaffold00158 144032 1 T G scaffold16697 Both SNP 0044.scaffold00158 144057 1 G A scaffold16697 Both SNP 0044.scaffold00158 144247 1 C T scaffold16697 Both SNP 0044.scaffold00158 144268 1 T C scaffold16697 Both SNP 0044.scaffold00158 144329 1 A G scaffold16697 Both SNP 0044.scaffold00158 144332 1 C T scaffold16697 ReadM SNP 0044.scaffold00158 144527 1 T C - ReadM SNP 0044.scaffold00158 144542 1 G T - ReadM SNP 0044.scaffold00158 144676 1 C G - ReadM INDEL 0044.scaffold00158 144678 1 A . - ReadM SNP 0044.scaffold00158 144690 1 A G - ReadM SNP 0044.scaffold00158 144762 1 G T - ReadM SNP 0044.scaffold00158 144807 1 C T - ScafM SNP 0044.scaffold00158 145005 1 T A scaffold16697 ScafM INDEL 0044.scaffold00158 145014 4 .... TAAA scaffold16697 Both SNP 0044.scaffold00158 145121 1 A T scaffold16697 Both INDEL 0044.scaffold00158 145172 1 . C scaffold16697 Both SNP 0044.scaffold00158 145187 1 G A scaffold16697 Both INDEL 0044.scaffold00158 145322 1 A . scaffold16697 ScafM SNP 0044.scaffold00158 145363 1 A C scaffold16697 ScafM SNP 0044.scaffold00158 145382 3 TTA GAT scaffold16697 ScafM SNP 0044.scaffold00158 145386 1 A G scaffold16697 ScafM SNP 0044.scaffold00158 145394 1 A G scaffold16697 ScafM SNP 0044.scaffold00158 145407 1 A C scaffold16697 ScafM SNP 0044.scaffold00158 145461 1 T C scaffold16697 ScafM SNP 0044.scaffold00158 145466 1 G A scaffold16697 ScafM SNP 0044.scaffold00158 145478 1 G A scaffold16697 ScafM SNP 0044.scaffold00158 145489 1 T G scaffold16697 Both SNP 0044.scaffold00158 145678 1 A G scaffold16697 Both SNP 0044.scaffold00158 145876 1 G A scaffold16697 ScafM SNP 0044.scaffold00158 146060 1 C G scaffold16697 ReadM SNP 0044.scaffold00158 146177 1 T A - ReadM SNP 0044.scaffold00158 146205 1 T A - ReadM SNP 0044.scaffold00158 146217 1 T A - ScafM SNP 0044.scaffold00158 146272 1 T C scaffold16697 ScafM SNP 0044.scaffold00158 146274 1 G A scaffold16697 ScafM INDEL 0044.scaffold00158 146296 33 TTTTTTTTTTTGACAAGAATAACAAAGAAAAGT ................................. scaffold16697 ScafM INDEL 0044.scaffold00158 146358 1 T . scaffold16697 ScafM SNP 0044.scaffold00158 146360 1 T G scaffold16697 ScafM SNP 0044.scaffold00158 146432 1 T A scaffold16697 ScafM SNP 0044.scaffold00158 146434 1 T C scaffold16697 ReadM SNP 0044.scaffold00158 146907 1 C T - Both INDEL 0044.scaffold00158 146990 1 . C scaffold16697 ScafM SNP 0044.scaffold00158 147102 1 C T scaffold16697 ScafM SNP 0044.scaffold00158 147143 1 A C scaffold16697 Both SNP 0044.scaffold00158 147498 1 G A scaffold16697 ScafM SNP 0044.scaffold00158 147543 1 C T scaffold16697 Both SNP 0044.scaffold00158 149277 1 A G scaffold16697 Both SNP 0044.scaffold00158 149324 1 T C scaffold16697 ReadM SNP 0044.scaffold00158 149401 1 A G - ReadM SNP 0044.scaffold00158 149470 1 T G - Both SNP 0044.scaffold00158 149689 1 T A scaffold16697 Both SNP 0044.scaffold00158 149717 1 G A scaffold16697 Both SNP 0044.scaffold00158 149740 1 G A scaffold16697 Both SNP 0044.scaffold00158 149782 1 G A scaffold16697 Both SNP 0044.scaffold00158 149818 1 G A scaffold16697 Both SNP 0044.scaffold00158 149913 1 G A scaffold16697 Both SNP 0044.scaffold00158 150027 1 G C scaffold16697 ScafM SNP 0044.scaffold00158 150085 1 A C scaffold16697 Both SNP 0044.scaffold00158 150140 1 A T scaffold16697 Both SNP 0044.scaffold00158 150364 1 T C scaffold16697 ScafM SNP 0044.scaffold00158 150472 2 TA AT scaffold16697 Both SNP 0044.scaffold00158 150633 1 T C scaffold16697 ScafM SNP 0044.scaffold00158 150646 1 C T scaffold16697 Both SNP 0044.scaffold00158 150744 1 A C scaffold16697 Both SNP 0044.scaffold00158 150771 1 T C scaffold16697 Both SNP 0044.scaffold00158 150849 1 C T scaffold16697 ReadM SNP 0044.scaffold00158 150942 1 C G - ReadM SNP 0044.scaffold00158 151012 1 G A - ReadM SNP 0044.scaffold00158 151066 1 A G - ReadM SNP 0044.scaffold00158 151114 1 A G - ReadM SNP 0044.scaffold00158 151121 1 T C - ReadM SNP 0044.scaffold00158 151183 1 T G - Both SNP 0044.scaffold00158 151293 1 T G scaffold16697 ReadM SNP 0044.scaffold00158 151582 1 G A - ReadM SNP 0044.scaffold00158 151672 1 T G - ReadM SNP 0044.scaffold00158 151686 1 T C - ReadM SNP 0044.scaffold00158 151774 1 C T - ReadM SNP 0044.scaffold00158 151862 1 T C - ReadM SNP 0044.scaffold00158 151954 1 T C - ReadM SNP 0044.scaffold00158 152018 1 C T - ReadM SNP 0044.scaffold00158 152037 1 T A - ReadM SNP 0044.scaffold00158 152062 1 A G - ReadM SNP 0044.scaffold00158 152100 1 C G - ReadM SNP 0044.scaffold00158 152125 1 T A - ReadM SNP 0044.scaffold00158 152486 1 G A - ReadM SNP 0044.scaffold00158 152553 1 C T - ReadM SNP 0044.scaffold00158 152644 1 G T - ReadM SNP 0044.scaffold00158 152692 1 T G - ReadM SNP 0044.scaffold00158 152708 1 C G - ReadM SNP 0044.scaffold00158 152780 1 G C - ReadM SNP 0044.scaffold00158 152783 1 A G - ReadM SNP 0044.scaffold00158 152813 1 C T - ReadM SNP 0044.scaffold00158 152965 1 A G - ReadM SNP 0044.scaffold00158 153028 1 G A - ReadM SNP 0044.scaffold00158 153047 1 G C - ReadM SNP 0044.scaffold00158 153079 1 G A - ReadM SNP 0044.scaffold00158 153118 1 C T - ReadM SNP 0044.scaffold00158 163018 1 C A - ReadM SNP 0044.scaffold00158 163027 1 A G - ReadM SNP 0044.scaffold00158 163079 1 T G - ReadM SNP 0044.scaffold00158 163239 1 T C - ReadM SNP 0044.scaffold00158 163366 1 C T - ScafM SNP 0044.scaffold00158 164939 1 T G scaffold24636 ScafM SNP 0044.scaffold00158 164972 1 T C scaffold24636 ScafM SNP 0044.scaffold00158 165060 1 T C scaffold24636 ScafM SNP 0044.scaffold00158 165100 2 GG AA scaffold24636 ScafM SNP 0044.scaffold00158 165126 1 T A scaffold24636 ScafM SNP 0044.scaffold00158 165207 1 C T scaffold24636 ScafM SNP 0044.scaffold00158 165220 1 G A scaffold24636 ScafM SNP 0044.scaffold00158 165248 1 A G scaffold24636 ScafM SNP 0044.scaffold00158 165254 1 C T scaffold24636 Both SNP 0044.scaffold00158 165276 1 T C scaffold24636 Both SNP 0044.scaffold00158 165300 1 G A scaffold24636 Both SNP 0044.scaffold00158 165505 1 A G scaffold24636 Both SNP 0044.scaffold00158 165658 1 T C scaffold24636 Both SNP 0044.scaffold00158 165837 1 G C scaffold24636 ScafM SNP 0044.scaffold00158 165844 1 C T scaffold24636 Both SNP 0044.scaffold00158 165951 1 A G scaffold24636 Both SNP 0044.scaffold00158 165989 1 T G scaffold24636 Both SNP 0044.scaffold00158 166020 1 A G scaffold24636 Both SNP 0044.scaffold00158 166067 1 A G scaffold24636 Both SNP 0044.scaffold00158 166236 1 C T scaffold24636 Both SNP 0044.scaffold00158 166363 1 G A scaffold24636 ScafM SNP 0044.scaffold00158 166417 1 A T scaffold24636 Both SNP 0044.scaffold00158 166430 1 C A scaffold24636 ScafM INDEL 0044.scaffold00158 166472 4 .... TAAA scaffold24636 ScafM INDEL 0044.scaffold00158 166484 2 .C AT scaffold24636 ScafM SNP 0044.scaffold00158 166522 1 A G scaffold24636 Both SNP 0044.scaffold00158 166736 1 A G scaffold24636 ReadM SNP 0044.scaffold00158 166882 1 T A - ReadM SNP 0044.scaffold00158 166993 1 G A - ReadM SNP 0044.scaffold00158 167067 1 T A - ReadM INDEL 0044.scaffold00158 167183 1 G . - ReadM SNP 0044.scaffold00158 167221 1 G T - ReadM SNP 0044.scaffold00158 167236 1 C T - ReadM SNP 0044.scaffold00158 167418 1 G A - ReadM SNP 0044.scaffold00158 167555 1 A G - ReadM INDEL 0044.scaffold00158 167715 1 T . - ReadM SNP 0044.scaffold00158 167759 1 T C - ReadM SNP 0044.scaffold00158 167890 1 A G - ReadM SNP 0044.scaffold00158 167963 1 G T - ReadM SNP 0044.scaffold00158 168027 1 A G - ReadM SNP 0044.scaffold00158 168052 1 T A - ReadM SNP 0044.scaffold00158 168131 1 A T - ReadM SNP 0044.scaffold00158 168186 1 C T - Both SNP 0044.scaffold00158 168237 1 T A scaffold24636 Both SNP 0044.scaffold00158 168281 1 A G scaffold24636 Both SNP 0044.scaffold00158 168291 1 C A scaffold24636 Both SNP 0044.scaffold00158 168397 1 G T scaffold24636 Both SNP 0044.scaffold00158 168450 1 C G scaffold24636 Both SNP 0044.scaffold00158 168527 1 A C scaffold24636 Both SNP 0044.scaffold00158 168897 1 G A scaffold24636 ReadM SNP 0044.scaffold00158 168931 1 A C - ReadM INDEL 0044.scaffold00158 168934 1 . T - ReadM SNP 0044.scaffold00158 169026 1 G T - ReadM SNP 0044.scaffold00158 169125 1 A T - ReadM SNP 0044.scaffold00158 169144 1 C G - ReadM SNP 0044.scaffold00158 169394 1 C T - ReadM SNP 0044.scaffold00158 169413 1 C T - ReadM SNP 0044.scaffold00158 169427 1 T G - ReadM SNP 0044.scaffold00158 169457 1 C T - ReadM INDEL 0044.scaffold00158 169839 1 . T - ReadM SNP 0044.scaffold00158 170024 1 A G - ReadM SNP 0044.scaffold00158 170043 1 C T - ReadM SNP 0044.scaffold00158 170083 1 T C - ReadM SNP 0044.scaffold00158 170363 1 G C - ReadM SNP 0044.scaffold00158 170414 1 C T - ReadM SNP 0044.scaffold00158 170437 1 A G - ReadM SNP 0044.scaffold00158 170508 1 T C - ReadM SNP 0044.scaffold00158 170643 1 A G - ReadM SNP 0044.scaffold00158 170714 1 A T - ScafM SNP 0044.scaffold00158 170742 1 C T scaffold6335 ScafM SNP 0044.scaffold00158 170744 1 G A scaffold6335 ScafM SNP 0044.scaffold00158 170749 1 T G scaffold6335 ScafM SNP 0044.scaffold00158 170751 1 G A scaffold6335 ScafM SNP 0044.scaffold00158 170768 1 G A scaffold6335 ScafM SNP 0044.scaffold00158 170797 2 CC TT scaffold6335 ScafM SNP 0044.scaffold00158 170804 1 T G scaffold6335 ScafM SNP 0044.scaffold00158 170812 1 G T scaffold6335 ScafM SNP 0044.scaffold00158 170834 1 A G scaffold6335 ScafM SNP 0044.scaffold00158 170840 1 A G scaffold6335 ScafM SNP 0044.scaffold00158 170848 1 C T scaffold6335 ScafM INDEL 0044.scaffold00158 170861 1 . T scaffold6335 ReadM SNP 0044.scaffold00158 171067 1 C A - ReadM SNP 0044.scaffold00158 171171 1 C A - ReadM SNP 0044.scaffold00158 190754 1 G A - ReadM SNP 0044.scaffold00158 190798 1 C T - ReadM SNP 0044.scaffold00158 190967 1 C T - ReadM SNP 0044.scaffold00158 192754 1 G A - ReadM SNP 0044.scaffold00158 193255 1 A C - ReadM SNP 0044.scaffold00158 193662 1 C A - ScafM INDEL 0044.scaffold00158 195689 1 T . scaffold51565 ScafM SNP 0044.scaffold00158 195698 1 T A scaffold51565 Both SNP 0044.scaffold00158 197109 1 C T scaffold28195 ReadM INDEL 0044.scaffold00158 197112 1 . T - ReadM SNP 0044.scaffold00158 197249 1 G A - Both SNP 0044.scaffold00158 197507 1 G C scaffold28195 ScafM SNP 0044.scaffold00158 197670 1 A T scaffold28195 ScafM SNP 0044.scaffold00158 198299 1 G A scaffold28195 ScafM SNP 0044.scaffold00158 198308 1 C T scaffold28195 ScafM SNP 0044.scaffold00158 198312 1 T A scaffold28195 ScafM SNP 0044.scaffold00158 198328 2 TT AC scaffold28195 ScafM INDEL 0044.scaffold00158 198341 1 A . scaffold28195 ScafM SNP 0044.scaffold00158 198343 1 C T scaffold28195 ScafM SNP 0044.scaffold00158 198377 1 A G scaffold28195 ScafM INDEL 0044.scaffold00158 198483 26 .......................... AAATTTAAACATTACGACTTTGTTTT scaffold28195 Both SNP 0044.scaffold00158 198614 1 C A scaffold28195 ScafM SNP 0044.scaffold00158 198635 1 C A scaffold28195 ScafM SNP 0044.scaffold00158 198699 1 G A scaffold28195 ScafM SNP 0044.scaffold00158 198769 1 A G scaffold28195 ScafM SNP 0044.scaffold00158 199259 1 A G scaffold28195 ScafM SNP 0044.scaffold00158 199281 1 A G scaffold28195 ReadM SNP 0044.scaffold00158 199458 1 C T - Both SNP 0044.scaffold00158 199774 1 T A scaffold28195 ScafM INDEL 0044.scaffold00158 199802 16 ................ GACATTTCGAACCCTA scaffold28195 Both SNP 0044.scaffold00158 199840 1 A C scaffold28195 ScafM SNP 0044.scaffold00158 199944 1 G A scaffold28195 Both INDEL 0044.scaffold00158 200070 2 .. AA scaffold28195 Both SNP 0044.scaffold00158 200390 1 T C scaffold28195 ScafM INDEL 0044.scaffold00158 200978 3 AAA ... scaffold28195 Both SNP 0044.scaffold00158 201120 1 G A scaffold28195 ScafM SNP 0044.scaffold00158 201126 2 CT TC scaffold28195 Both SNP 0044.scaffold00158 201347 1 T C scaffold28195 Both SNP 0044.scaffold00158 201400 1 C G scaffold28195 Both SNP 0044.scaffold00158 201638 1 C T scaffold28195 Both SNP 0044.scaffold00158 201779 1 C G scaffold28195 Both SNP 0044.scaffold00158 201790 1 G A scaffold28195 Both SNP 0044.scaffold00158 201985 1 G C scaffold28195 Both SNP 0044.scaffold00158 202044 1 C T scaffold28195 ReadM SNP 0044.scaffold00158 202094 1 C T - ReadM SNP 0044.scaffold00158 202340 1 T C - ReadM SNP 0044.scaffold00158 202511 1 T C - ReadM SNP 0044.scaffold00158 202562 1 C G - ReadM SNP 0044.scaffold00158 202690 1 A T - ReadM SNP 0044.scaffold00158 202888 1 G T - ReadM SNP 0044.scaffold00158 203010 1 G A - ReadM SNP 0044.scaffold00158 203306 1 G C - ReadM SNP 0044.scaffold00158 203516 2 AA GG - ReadM SNP 0044.scaffold00158 203675 1 C T - ReadM SNP 0044.scaffold00158 203687 1 A C - ReadM SNP 0044.scaffold00158 203882 1 A G - ReadM SNP 0044.scaffold00158 204063 1 T A - ReadM INDEL 0044.scaffold00158 204371 1 T . - ReadM SNP 0044.scaffold00158 205574 1 C T - ReadM SNP 0044.scaffold00158 205617 2 AT GC - ReadM SNP 0044.scaffold00158 205739 1 G A - ReadM SNP 0044.scaffold00158 205781 1 T C - ReadM SNP 0044.scaffold00158 205827 1 T C - ReadM SNP 0044.scaffold00158 206019 1 T G - ReadM SNP 0044.scaffold00158 206024 1 C G - ReadM SNP 0044.scaffold00158 206063 1 T C - ReadM SNP 0044.scaffold00158 206129 1 A G - ReadM SNP 0044.scaffold00158 206136 1 A G - ReadM SNP 0044.scaffold00158 206275 1 C G - ReadM SNP 0044.scaffold00158 206278 1 G A - ReadM SNP 0044.scaffold00158 206366 1 C A - ReadM SNP 0044.scaffold00158 206369 1 C G - ReadM SNP 0044.scaffold00158 206505 1 C T - ReadM INDEL 0044.scaffold00158 206647 1 . G - Both SNP 0044.scaffold00158 206738 1 T C scaffold28195 Both SNP 0044.scaffold00158 206897 1 A G scaffold28195 ScafM INDEL 0044.scaffold00158 206930 2 .. AA scaffold28195 ReadM SNP 0044.scaffold00158 207242 1 C T - Both SNP 0044.scaffold00158 207464 1 A G scaffold28195 ScafM SNP 0044.scaffold00158 207499 1 T C scaffold28195 ScafM SNP 0044.scaffold00158 207503 1 A G scaffold28195 ScafM SNP 0044.scaffold00158 207529 1 T A scaffold28195 ScafM SNP 0044.scaffold00158 207572 1 T C scaffold28195 ReadM SNP 0044.scaffold00158 208457 1 A C - ReadM SNP 0044.scaffold00158 208800 1 C T - ReadM INDEL 0044.scaffold00158 208905 1 . T - ReadM SNP 0044.scaffold00158 209930 1 G A - ReadM SNP 0044.scaffold00158 209990 1 T C - ReadM SNP 0044.scaffold00158 210097 1 T C - ReadM SNP 0044.scaffold00158 210112 1 C T - ReadM INDEL 0044.scaffold00158 210137 1 A . - ReadM INDEL 0044.scaffold00158 210263 1 . T - ReadM SNP 0044.scaffold00158 210601 1 A G - ReadM SNP 0044.scaffold00158 210659 1 A C - ReadM SNP 0044.scaffold00158 211175 1 C T - ReadM SNP 0044.scaffold00158 211268 1 G A - ReadM SNP 0044.scaffold00158 211419 1 A G - ReadM SNP 0044.scaffold00158 211485 1 A G - ReadM SNP 0044.scaffold00158 211602 1 C G - ReadM SNP 0044.scaffold00158 211606 1 C T - ReadM SNP 0044.scaffold00158 212405 1 A C - ReadM SNP 0044.scaffold00158 212668 1 C T - ReadM INDEL 0044.scaffold00158 212781 1 A . - ReadM SNP 0044.scaffold00158 212883 1 A C - ReadM SNP 0044.scaffold00158 213236 1 T G - ReadM SNP 0044.scaffold00158 213625 1 A G - ReadM SNP 0044.scaffold00158 214291 1 G A - ReadM SNP 0044.scaffold00158 214413 1 G A - ReadM SNP 0044.scaffold00158 215318 1 G A - ReadM SNP 0044.scaffold00158 215439 1 T C - Both SNP 0044.scaffold00158 215586 1 T C scaffold17144 Both SNP 0044.scaffold00158 215595 1 T C scaffold17144 Both SNP 0044.scaffold00158 215788 1 T C scaffold17144 Both SNP 0044.scaffold00158 215905 1 T C scaffold17144 ScafM SNP 0044.scaffold00158 215992 1 G A scaffold17144 Both SNP 0044.scaffold00158 216026 1 T C scaffold17144 Both SNP 0044.scaffold00158 216079 1 C A scaffold17144 ScafM SNP 0044.scaffold00158 216214 1 C T scaffold17144 ScafM SNP 0044.scaffold00158 216448 1 T C scaffold17144 ScafM INDEL 0044.scaffold00158 216496 46 .............................................. ATTCTTAAAATACTCTGGCTTAAACTCGATCCCAAACACGAAGCTT scaffold17144 ScafM INDEL 0044.scaffold00158 216704 18 .................. CGCTCATTTTTTTAGAGA scaffold17144 Both SNP 0044.scaffold00158 216720 1 T G scaffold17144 ScafM SNP 0044.scaffold00158 216730 1 A G scaffold17144 Both SNP 0044.scaffold00158 216765 1 A G scaffold17144 Both INDEL 0044.scaffold00158 216927 1 A . scaffold17144 ScafM SNP 0044.scaffold00158 217039 1 G T scaffold17144 ReadM SNP 0044.scaffold00158 217102 1 A G - Both SNP 0044.scaffold00158 217235 1 A C scaffold17144 ScafM INDEL 0044.scaffold00158 217270 1 G . scaffold17144 ScafM SNP 0044.scaffold00158 217433 1 C T scaffold17144 ScafM INDEL 0044.scaffold00158 217439 1 A . scaffold17144 Both SNP 0044.scaffold00158 217601 1 T C scaffold17144 Both SNP 0044.scaffold00158 217728 1 T G scaffold17144 Both SNP 0044.scaffold00158 217807 1 A T scaffold17144 ReadM SNP 0044.scaffold00158 218486 1 T C - ReadM SNP 0044.scaffold00158 218873 1 A G - ScafM SNP 0044.scaffold00158 219359 1 T G scaffold17144 ReadM SNP 0044.scaffold00158 219729 1 C T - ScafM SNP 0044.scaffold00158 220306 1 C A scaffold17144 ScafM SNP 0044.scaffold00158 220377 1 A G scaffold17144 ScafM SNP 0044.scaffold00158 220485 1 C A scaffold17144 ScafM SNP 0044.scaffold00158 220976 1 A C scaffold17144 ScafM SNP 0044.scaffold00158 221083 1 T C scaffold17144 ScafM INDEL 0044.scaffold00158 221085 1 A . scaffold17144 Both SNP 0044.scaffold00158 221233 1 G A scaffold17144 ScafM SNP 0044.scaffold00158 221449 1 T G scaffold17144 ScafM INDEL 0044.scaffold00158 221651 3 GGG ... scaffold17144 ScafM SNP 0044.scaffold00158 221761 1 G A scaffold17144 ReadM SNP 0044.scaffold00158 225104 1 T C - ScafM SNP 0044.scaffold00158 225952 1 A G scaffold17144 ScafM SNP 0044.scaffold00158 226078 1 A G scaffold17144 ScafM SNP 0044.scaffold00158 226175 1 A T scaffold17144 ScafM SNP 0044.scaffold00158 267047 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 267053 2 TG CA scaffold34554 ScafM INDEL 0044.scaffold00158 267070 2 AT .. scaffold34554 ScafM SNP 0044.scaffold00158 267141 1 A G scaffold34554 ScafM INDEL 0044.scaffold00158 267185 24 ........................ TTTGATTATATTTCAGAAAGTTCG scaffold34554 ScafM SNP 0044.scaffold00158 267281 1 C T scaffold34554 ReadM SNP 0044.scaffold00158 267477 1 C T - ScafM SNP 0044.scaffold00158 267755 1 A C scaffold34554 ScafM SNP 0044.scaffold00158 267770 1 G T scaffold34554 ScafM SNP 0044.scaffold00158 267908 1 A G scaffold34554 ScafM SNP 0044.scaffold00158 267928 1 A T scaffold34554 ScafM SNP 0044.scaffold00158 268025 1 T G scaffold34554 ScafM SNP 0044.scaffold00158 268030 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 268072 1 C T scaffold34554 Both INDEL 0044.scaffold00158 268272 1 C . scaffold34554 ScafM SNP 0044.scaffold00158 268312 1 A T scaffold34554 Both SNP 0044.scaffold00158 268335 1 A G scaffold34554 Both SNP 0044.scaffold00158 268523 1 A G scaffold34554 ScafM SNP 0044.scaffold00158 268588 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 268634 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 268642 1 T A scaffold34554 ScafM SNP 0044.scaffold00158 268648 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 268713 1 C A scaffold34554 ScafM SNP 0044.scaffold00158 268734 1 A T scaffold34554 ReadM SNP 0044.scaffold00158 269130 1 A T - ReadM SNP 0044.scaffold00158 269143 1 C G - ReadM SNP 0044.scaffold00158 269498 1 A G - ReadM SNP 0044.scaffold00158 269636 1 C T - ReadM SNP 0044.scaffold00158 269857 1 C G - ReadM SNP 0044.scaffold00158 270003 1 T C - ScafM SNP 0044.scaffold00158 270899 1 C G scaffold23474 ScafM SNP 0044.scaffold00158 270983 1 G A scaffold23474 ScafM SNP 0044.scaffold00158 271099 1 T A scaffold23474 ScafM INDEL 0044.scaffold00158 271146 29 ............................. ACGAACGCAAACTAAAGATTCAAATAAAT scaffold23474 ScafM SNP 0044.scaffold00158 271166 1 C G scaffold23474 ScafM SNP 0044.scaffold00158 271725 1 C A scaffold34554 ScafM SNP 0044.scaffold00158 280240 1 G A scaffold27494 ScafM INDEL 0044.scaffold00158 280572 36 TATAATCCATATACCCAATTCAGATTTCAGCACATC .................................... scaffold27494 ScafM SNP 0044.scaffold00158 280630 1 G C scaffold27494 Both INDEL 0044.scaffold00158 280632 2 GT .. scaffold27494 Both INDEL 0044.scaffold00158 280720 1 G . scaffold27494 ScafM SNP 0044.scaffold00158 280938 1 G A scaffold27494 ReadM INDEL 0044.scaffold00158 282895 3 TAA ... - ReadM SNP 0044.scaffold00158 283116 1 C G - ScafM INDEL 0044.scaffold00158 283593 5 ..... AAAAT scaffold34554 ReadM SNP 0044.scaffold00158 283680 1 T A - ReadM SNP 0044.scaffold00158 283682 1 T C - ReadM SNP 0044.scaffold00158 283718 1 T C - ReadM SNP 0044.scaffold00158 283922 1 T A - ScafM SNP 0044.scaffold00158 284106 1 C A scaffold34554 Both SNP 0044.scaffold00158 284296 1 G A scaffold34554 Both SNP 0044.scaffold00158 284365 1 A C scaffold34554 ReadM SNP 0044.scaffold00158 284421 1 C T - ScafM SNP 0044.scaffold00158 284559 1 A G scaffold32395 ScafM INDEL 0044.scaffold00158 284562 3 TTA .CC scaffold32395 ReadM SNP 0044.scaffold00158 284563 1 T C - ScafM SNP 0044.scaffold00158 284566 2 AG TT scaffold32395 ScafM SNP 0044.scaffold00158 284582 1 T C scaffold32395 ScafM SNP 0044.scaffold00158 284590 1 A C scaffold32395 Both SNP 0044.scaffold00158 284688 1 T G scaffold32395 ScafM SNP 0044.scaffold00158 284707 1 C T scaffold32395 ScafM SNP 0044.scaffold00158 284723 1 G A scaffold32395 ScafM SNP 0044.scaffold00158 284729 1 C A scaffold32395 ScafM SNP 0044.scaffold00158 284737 1 A G scaffold32395 ReadM SNP 0044.scaffold00158 284909 1 G A - ReadM SNP 0044.scaffold00158 284954 1 C G - ReadM INDEL 0044.scaffold00158 284985 1 . T - ScafM INDEL 0044.scaffold00158 285642 1 . C scaffold20235 ScafM SNP 0044.scaffold00158 285651 1 G T scaffold20235 ScafM SNP 0044.scaffold00158 285654 2 CA GG scaffold20235 ScafM SNP 0044.scaffold00158 285667 1 T A scaffold20235 ScafM SNP 0044.scaffold00158 285670 1 T A scaffold20235 ScafM SNP 0044.scaffold00158 285715 1 C A scaffold20235 ScafM SNP 0044.scaffold00158 285736 1 C T scaffold20235 ScafM SNP 0044.scaffold00158 285750 1 A T scaffold20235 ReadM SNP 0044.scaffold00158 286074 1 T C - ReadM SNP 0044.scaffold00158 286173 1 A T - ReadM SNP 0044.scaffold00158 286272 1 T C - ReadM SNP 0044.scaffold00158 286358 1 G A - ReadM SNP 0044.scaffold00158 286811 1 A G - ReadM INDEL 0044.scaffold00158 287057 2 .. CA - ReadM SNP 0044.scaffold00158 287067 1 T C - ReadM SNP 0044.scaffold00158 287142 1 T C - ReadM INDEL 0044.scaffold00158 287523 3 TCA ... - ReadM SNP 0044.scaffold00158 288028 1 C G - ReadM SNP 0044.scaffold00158 288060 1 A C - ReadM SNP 0044.scaffold00158 289795 1 A G - ReadM SNP 0044.scaffold00158 289846 1 C T - ReadM SNP 0044.scaffold00158 290687 1 T A - ReadM SNP 0044.scaffold00158 290689 1 A C - ReadM SNP 0044.scaffold00158 290713 1 C T - ReadM SNP 0044.scaffold00158 290838 1 A G - ReadM SNP 0044.scaffold00158 290916 1 T C - ReadM SNP 0044.scaffold00158 290961 1 T C - ReadM SNP 0044.scaffold00158 291171 1 T C - ReadM SNP 0044.scaffold00158 291284 1 A G - ReadM SNP 0044.scaffold00158 291309 1 T C - ReadM INDEL 0044.scaffold00158 291870 1 . G - ReadM SNP 0044.scaffold00158 292102 1 A G - ReadM SNP 0044.scaffold00158 292239 1 A C - ReadM SNP 0044.scaffold00158 292525 1 G T - ReadM SNP 0044.scaffold00158 292720 1 A G - ReadM SNP 0044.scaffold00158 292919 1 T C - ReadM SNP 0044.scaffold00158 292993 1 C T - ReadM SNP 0044.scaffold00158 293509 1 A C - ReadM SNP 0044.scaffold00158 293883 1 A T - ReadM SNP 0044.scaffold00158 293940 1 G C - ReadM SNP 0044.scaffold00158 294133 1 C G - ReadM SNP 0044.scaffold00158 294293 1 G A - ReadM SNP 0044.scaffold00158 294610 1 T C - ScafM SNP 0044.scaffold00158 294838 1 C T scaffold4581 ScafM SNP 0044.scaffold00158 294866 1 A G scaffold4581 Both SNP 0044.scaffold00158 294896 1 T A scaffold4581 ScafM SNP 0044.scaffold00158 294911 1 T A scaffold4581 ScafM SNP 0044.scaffold00158 294913 1 C T scaffold4581 ScafM SNP 0044.scaffold00158 294927 1 A G scaffold4581 ScafM SNP 0044.scaffold00158 294934 1 T C scaffold4581 ScafM SNP 0044.scaffold00158 294956 1 C T scaffold4581 ReadM SNP 0044.scaffold00158 295010 1 C G - ReadM SNP 0044.scaffold00158 295235 1 C G - ReadM SNP 0044.scaffold00158 299596 1 T G - ReadM SNP 0044.scaffold00158 299612 1 T G - ReadM SNP 0044.scaffold00158 299998 1 A G - ReadM SNP 0044.scaffold00158 300006 1 C T - ReadM SNP 0044.scaffold00158 300107 1 A G - ReadM SNP 0044.scaffold00158 300181 1 T C - ReadM SNP 0044.scaffold00158 300731 1 A G - ReadM SNP 0044.scaffold00158 301340 1 A G - ReadM SNP 0044.scaffold00158 301348 1 T C - ReadM SNP 0044.scaffold00158 301872 1 A G - ReadM SNP 0044.scaffold00158 302068 1 A G - ReadM SNP 0044.scaffold00158 302103 1 A C - ReadM SNP 0044.scaffold00158 302161 1 C T - ReadM SNP 0044.scaffold00158 302476 1 C G - ReadM SNP 0044.scaffold00158 303013 1 A G - ReadM SNP 0044.scaffold00158 303015 1 T C - ReadM SNP 0044.scaffold00158 303039 1 A G - ReadM SNP 0044.scaffold00158 303048 1 C T - ReadM SNP 0044.scaffold00158 304196 1 C G - ReadM INDEL 0044.scaffold00158 304204 1 . C - ReadM SNP 0044.scaffold00158 304242 1 C T - ReadM SNP 0044.scaffold00158 304569 1 A G - ReadM SNP 0044.scaffold00158 304795 1 C G - ReadM SNP 0044.scaffold00158 305026 1 T C - ReadM SNP 0044.scaffold00158 305403 1 T G - ReadM SNP 0044.scaffold00158 305514 1 A C - ReadM SNP 0044.scaffold00158 305578 1 C G - ReadM SNP 0044.scaffold00158 305779 1 A T - ReadM SNP 0044.scaffold00158 306009 1 A C - ReadM SNP 0044.scaffold00158 306273 1 G A - ScafM SNP 0044.scaffold00158 306318 1 G A scaffold40915 ScafM INDEL 0044.scaffold00158 306566 1 . C scaffold40915 ScafM SNP 0044.scaffold00158 306916 1 C A scaffold40915 Both SNP 0044.scaffold00158 306956 1 T C scaffold40915 ScafM SNP 0044.scaffold00158 307194 1 A G scaffold40915 ScafM INDEL 0044.scaffold00158 307290 3 TGA ... scaffold40915 ScafM SNP 0044.scaffold00158 307360 1 C T scaffold40915 ScafM SNP 0044.scaffold00158 307366 1 C T scaffold40915 Both SNP 0044.scaffold00158 307409 1 T G scaffold40915 ScafM SNP 0044.scaffold00158 307570 1 A T scaffold40915 Both SNP 0044.scaffold00158 310787 1 T C scaffold24312 Both SNP 0044.scaffold00158 310849 1 G C scaffold24312 ScafM SNP 0044.scaffold00158 310887 1 G T scaffold24312 ScafM INDEL 0044.scaffold00158 310912 4 .... AAAA scaffold24312 ScafM SNP 0044.scaffold00158 310921 1 T G scaffold24312 ScafM SNP 0044.scaffold00158 310928 1 A C scaffold24312 Both SNP 0044.scaffold00158 311161 1 A G scaffold24312 ReadM INDEL 0044.scaffold00158 311397 1 T . - ReadM SNP 0044.scaffold00158 311428 1 A C - ReadM SNP 0044.scaffold00158 311455 1 T C - ScafM SNP 0044.scaffold00158 312150 1 C A scaffold24312 ScafM SNP 0044.scaffold00158 312180 1 G C scaffold24312 ScafM SNP 0044.scaffold00158 312251 1 A G scaffold24312 ScafM SNP 0044.scaffold00158 313416 1 A T scaffold13215 ScafM SNP 0044.scaffold00158 313565 1 A G scaffold13215 Both SNP 0044.scaffold00158 313708 1 C T scaffold13215 ScafM INDEL 0044.scaffold00158 313727 3 ... ATT scaffold13215 ScafM SNP 0044.scaffold00158 313803 1 G A scaffold13215 ScafM SNP 0044.scaffold00158 314062 1 A G scaffold13215 Both SNP 0044.scaffold00158 314155 1 A G scaffold13215 ScafM SNP 0044.scaffold00158 314466 1 C T scaffold13215 ReadM SNP 0044.scaffold00158 314532 1 C T - ScafM SNP 0044.scaffold00158 314633 1 T C scaffold13215 ScafM SNP 0044.scaffold00158 314644 1 A G scaffold13215 Both SNP 0044.scaffold00158 314701 1 A G scaffold13215 ScafM SNP 0044.scaffold00158 314796 1 C T scaffold13215 Both SNP 0044.scaffold00158 314849 1 A T scaffold13215 ScafM SNP 0044.scaffold00158 314854 1 A C scaffold13215 ScafM SNP 0044.scaffold00158 314963 1 C T scaffold13215 ReadM SNP 0044.scaffold00158 315255 1 A G - ReadM SNP 0044.scaffold00158 315540 1 A G - ReadM SNP 0044.scaffold00158 315623 1 A C - ReadM SNP 0044.scaffold00158 315726 1 T G - ScafM SNP 0044.scaffold00158 316084 1 C T scaffold13215 ScafM SNP 0044.scaffold00158 316113 1 T C scaffold13215 ScafM SNP 0044.scaffold00158 316145 1 A C scaffold13215 Both SNP 0044.scaffold00158 317049 1 A T scaffold70876 ScafM SNP 0044.scaffold00158 317182 1 T A scaffold70876 Both SNP 0044.scaffold00158 317244 1 T A scaffold70876 Both INDEL 0044.scaffold00158 317332 1 . A scaffold70876 ScafM SNP 0044.scaffold00158 317637 1 A T scaffold70876 ScafM SNP 0044.scaffold00158 317778 1 T A scaffold70876 ScafM INDEL 0044.scaffold00158 317833 2 AA .. scaffold70876 ScafM SNP 0044.scaffold00158 317838 1 G T scaffold70876 ScafM SNP 0044.scaffold00158 317894 1 G A scaffold70876 ScafM SNP 0044.scaffold00158 317907 1 G A scaffold70876 ScafM SNP 0044.scaffold00158 318070 1 A G scaffold70876 ScafM INDEL 0044.scaffold00158 318570 1 C . scaffold13067 ScafM INDEL 0044.scaffold00158 318580 1 T . scaffold13067 ScafM SNP 0044.scaffold00158 318639 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 318743 1 A G scaffold13067 ScafM SNP 0044.scaffold00158 318783 1 T C scaffold13067 ScafM SNP 0044.scaffold00158 318808 1 A C scaffold13067 ScafM SNP 0044.scaffold00158 318988 1 C T scaffold13067 ScafM SNP 0044.scaffold00158 319012 1 T G scaffold13067 Both SNP 0044.scaffold00158 319044 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 319131 1 A C scaffold13067 ScafM SNP 0044.scaffold00158 319176 1 G A scaffold13067 ScafM INDEL 0044.scaffold00158 319255 1 . A scaffold13067 ScafM SNP 0044.scaffold00158 319289 1 T C scaffold13067 ScafM SNP 0044.scaffold00158 319333 1 A G scaffold13067 ScafM SNP 0044.scaffold00158 319396 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 319428 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 319490 1 G T scaffold13067 ScafM INDEL 0044.scaffold00158 319544 1 T . scaffold13067 ScafM SNP 0044.scaffold00158 319559 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 319968 1 T G scaffold13067 ScafM SNP 0044.scaffold00158 319980 1 A G scaffold13067 ScafM SNP 0044.scaffold00158 320001 1 C A scaffold13067 ScafM SNP 0044.scaffold00158 320137 1 C T scaffold13067 ScafM SNP 0044.scaffold00158 320513 1 G A scaffold13067 ScafM SNP 0044.scaffold00158 320516 1 T C scaffold13067 ScafM INDEL 0044.scaffold00158 320585 1 A . scaffold13067 ScafM SNP 0044.scaffold00158 320592 1 A C scaffold13067 ScafM SNP 0044.scaffold00158 320754 1 G T scaffold13067 ReadM SNP 0044.scaffold00158 320935 1 A G - ReadM SNP 0044.scaffold00158 321321 1 T G - ReadM SNP 0044.scaffold00158 321420 1 T C - ReadM SNP 0044.scaffold00158 321435 1 A G - ReadM SNP 0044.scaffold00158 321640 1 A G - ReadM SNP 0044.scaffold00158 321779 1 C G - ReadM SNP 0044.scaffold00158 321912 1 A T - ReadM SNP 0044.scaffold00158 322057 1 A T - ReadM SNP 0044.scaffold00158 322066 1 C T - ReadM SNP 0044.scaffold00158 322280 1 T C - ReadM SNP 0044.scaffold00158 322996 1 G T - ReadM SNP 0044.scaffold00158 323425 1 T C - ReadM SNP 0044.scaffold00158 323742 1 A G - ReadM SNP 0044.scaffold00158 323861 1 A G - ReadM SNP 0044.scaffold00158 323913 1 T C - ReadM SNP 0044.scaffold00158 324258 1 T C - ReadM INDEL 0044.scaffold00158 324322 1 . T - ReadM SNP 0044.scaffold00158 324450 1 A C - ReadM SNP 0044.scaffold00158 324566 1 G T - ReadM SNP 0044.scaffold00158 324574 1 T C - ReadM SNP 0044.scaffold00158 324807 1 T C - ReadM SNP 0044.scaffold00158 326041 1 G A - ReadM SNP 0044.scaffold00158 326084 1 A G - ReadM SNP 0044.scaffold00158 326244 1 G A - ReadM SNP 0044.scaffold00158 326274 1 A G - ReadM INDEL 0044.scaffold00158 326372 2 .. AT - ReadM SNP 0044.scaffold00158 326454 1 T C - ScafM SNP 0044.scaffold00158 328925 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 328992 1 T A scaffold14590 ScafM INDEL 0044.scaffold00158 329044 1 T . scaffold14590 ReadM SNP 0044.scaffold00158 329510 1 A G - ReadM INDEL 0044.scaffold00158 329743 1 A . - Both SNP 0044.scaffold00158 330001 1 A G scaffold14590 ReadM SNP 0044.scaffold00158 330190 1 A G - ReadM SNP 0044.scaffold00158 330739 1 T A - ReadM SNP 0044.scaffold00158 330746 1 A G - ReadM SNP 0044.scaffold00158 330752 1 G A - ReadM SNP 0044.scaffold00158 330968 1 A G - ReadM SNP 0044.scaffold00158 331013 1 A G - ReadM SNP 0044.scaffold00158 331060 1 G C - ReadM SNP 0044.scaffold00158 331344 1 T A - ReadM SNP 0044.scaffold00158 331519 1 T C - ScafM SNP 0044.scaffold00158 331870 1 C A scaffold14590 ReadM SNP 0044.scaffold00158 331986 1 C T - ScafM INDEL 0044.scaffold00158 332270 1 C . scaffold14590 ScafM SNP 0044.scaffold00158 332311 1 G A scaffold14590 ScafM SNP 0044.scaffold00158 332331 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 332464 1 G T scaffold14590 Both SNP 0044.scaffold00158 332486 1 G C scaffold14590 ReadM SNP 0044.scaffold00158 332534 1 T C - ReadM SNP 0044.scaffold00158 332640 1 A G - ReadM SNP 0044.scaffold00158 332861 1 T C - ReadM SNP 0044.scaffold00158 334381 1 T C - ScafM SNP 0044.scaffold00158 334629 1 C T scaffold14590 Both SNP 0044.scaffold00158 334764 1 A C scaffold14590 ScafM SNP 0044.scaffold00158 334996 1 C A scaffold14590 Both SNP 0044.scaffold00158 335002 1 A C scaffold14590 Both SNP 0044.scaffold00158 335102 1 T A scaffold14590 Both SNP 0044.scaffold00158 335257 1 C T scaffold14590 ScafM SNP 0044.scaffold00158 335275 1 C A scaffold14590 ScafM SNP 0044.scaffold00158 335354 1 G A scaffold14590 Both SNP 0044.scaffold00158 336102 1 T C scaffold14590 Both SNP 0044.scaffold00158 336151 1 C A scaffold14590 Both SNP 0044.scaffold00158 336188 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 336192 1 C A scaffold14590 ScafM SNP 0044.scaffold00158 336223 1 A G scaffold14590 ScafM SNP 0044.scaffold00158 336246 1 G A scaffold14590 ScafM SNP 0044.scaffold00158 336313 1 T G scaffold14590 ScafM INDEL 0044.scaffold00158 336831 1 . A scaffold14590 Both SNP 0044.scaffold00158 336858 1 T C scaffold14590 ReadM SNP 0044.scaffold00158 337039 1 T G - ReadM SNP 0044.scaffold00158 337151 1 T C - ReadM SNP 0044.scaffold00158 337363 1 A G - ReadM SNP 0044.scaffold00158 337464 1 A G - ScafM INDEL 0044.scaffold00158 337498 2 CG .T scaffold42840 ScafM INDEL 0044.scaffold00158 337501 1 . G scaffold42840 ScafM SNP 0044.scaffold00158 337509 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337511 1 A T scaffold42840 ScafM SNP 0044.scaffold00158 337516 3 GCC CTA scaffold42840 ReadM SNP 0044.scaffold00158 337519 1 A G - ScafM SNP 0044.scaffold00158 337523 2 TT GG scaffold42840 ScafM SNP 0044.scaffold00158 337540 1 G T scaffold42840 ScafM SNP 0044.scaffold00158 337542 1 T A scaffold42840 ScafM SNP 0044.scaffold00158 337545 1 G T scaffold42840 ScafM SNP 0044.scaffold00158 337555 1 A C scaffold42840 ScafM SNP 0044.scaffold00158 337560 1 A T scaffold42840 ScafM SNP 0044.scaffold00158 337568 1 A C scaffold42840 ScafM SNP 0044.scaffold00158 337570 2 CT TA scaffold42840 ScafM SNP 0044.scaffold00158 337587 1 T A scaffold42840 ScafM SNP 0044.scaffold00158 337605 1 T G scaffold42840 ScafM SNP 0044.scaffold00158 337616 2 AT GC scaffold42840 ScafM SNP 0044.scaffold00158 337623 2 GG CT scaffold42840 ScafM SNP 0044.scaffold00158 337626 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337632 1 T A scaffold42840 ScafM SNP 0044.scaffold00158 337641 2 GA AG scaffold42840 ReadM SNP 0044.scaffold00158 337642 1 A G - ScafM SNP 0044.scaffold00158 337650 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337653 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337655 1 C T scaffold42840 ScafM SNP 0044.scaffold00158 337674 1 A T scaffold42840 ScafM SNP 0044.scaffold00158 337680 2 GA AC scaffold42840 ScafM SNP 0044.scaffold00158 337683 1 G T scaffold42840 ScafM SNP 0044.scaffold00158 337686 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337704 2 CG AT scaffold42840 ScafM SNP 0044.scaffold00158 337722 2 AA TG scaffold42840 ReadM SNP 0044.scaffold00158 337723 1 A G - ScafM SNP 0044.scaffold00158 337728 1 G A scaffold42840 ScafM SNP 0044.scaffold00158 337731 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337740 2 GC AT scaffold42840 ScafM SNP 0044.scaffold00158 337763 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337773 1 T G scaffold42840 ScafM SNP 0044.scaffold00158 337782 1 A T scaffold42840 ScafM SNP 0044.scaffold00158 337785 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337791 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337800 1 T C scaffold42840 ScafM SNP 0044.scaffold00158 337806 1 A G scaffold42840 ScafM SNP 0044.scaffold00158 337808 1 C G scaffold42840 ScafM SNP 0044.scaffold00158 337824 1 G A scaffold42840 ScafM SNP 0044.scaffold00158 337826 1 T G scaffold42840 ReadM SNP 0044.scaffold00158 337863 1 T C - Both SNP 0044.scaffold00158 337999 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 338757 1 G A scaffold14590 Both SNP 0044.scaffold00158 338778 1 A G scaffold14590 Both SNP 0044.scaffold00158 338948 1 A G scaffold14590 Both SNP 0044.scaffold00158 338978 1 A G scaffold14590 ScafM SNP 0044.scaffold00158 339061 1 G A scaffold14590 ScafM SNP 0044.scaffold00158 339153 1 A G scaffold14590 Both SNP 0044.scaffold00158 339277 1 T A scaffold14590 ReadM SNP 0044.scaffold00158 339515 1 C A - ReadM SNP 0044.scaffold00158 339756 1 T C - ReadM SNP 0044.scaffold00158 339801 1 C A - Both SNP 0044.scaffold00158 340022 1 T C scaffold14590 Both SNP 0044.scaffold00158 340209 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 340451 1 T A scaffold14590 ReadM SNP 0044.scaffold00158 340545 1 A G - ReadM SNP 0044.scaffold00158 340621 1 A G - ReadM SNP 0044.scaffold00158 340636 1 A G - ReadM SNP 0044.scaffold00158 340880 1 A G - ScafM SNP 0044.scaffold00158 340949 1 G A scaffold14590 ScafM INDEL 0044.scaffold00158 340955 2 .. AG scaffold14590 ScafM SNP 0044.scaffold00158 340956 1 T C scaffold14590 Both SNP 0044.scaffold00158 341145 1 C A scaffold14590 ReadM SNP 0044.scaffold00158 341180 1 T A - ReadM SNP 0044.scaffold00158 341207 1 G C - ReadM SNP 0044.scaffold00158 341390 1 T A - ReadM SNP 0044.scaffold00158 341490 1 A C - ReadM SNP 0044.scaffold00158 341866 1 T C - ScafM SNP 0044.scaffold00158 342193 1 T G scaffold14590 Both INDEL 0044.scaffold00158 342264 1 . C scaffold14590 ScafM SNP 0044.scaffold00158 342266 1 G A scaffold14590 ScafM SNP 0044.scaffold00158 342385 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 342458 1 T C scaffold14590 ScafM SNP 0044.scaffold00158 342816 1 C T scaffold14590 ReadM SNP 0044.scaffold00158 343099 1 G C - Both SNP 0044.scaffold00158 343142 1 A G scaffold14590 ScafM SNP 0044.scaffold00158 343224 1 T A scaffold14590 ReadM SNP 0044.scaffold00158 343679 1 T G - ReadM SNP 0044.scaffold00158 343774 1 G C - ReadM SNP 0044.scaffold00158 343829 1 A G - ScafM INDEL 0044.scaffold00158 343871 8 CACGCCAC ........ scaffold14590 ScafM INDEL 0044.scaffold00158 343881 2 AT .. scaffold14590 ScafM SNP 0044.scaffold00158 343947 1 G T scaffold14590 ScafM INDEL 0044.scaffold00158 344067 1 A . scaffold14590 Both INDEL 0044.scaffold00158 344085 2 .. AT scaffold14590 ScafM INDEL 0044.scaffold00158 344996 11 AATTTATAGCT ........... scaffold14590 ScafM INDEL 0044.scaffold00158 345109 1 . A scaffold14590 Both SNP 0044.scaffold00158 345374 1 G C scaffold14590 ScafM SNP 0044.scaffold00158 345804 1 C A scaffold14590 ScafM SNP 0044.scaffold00158 345916 1 C A scaffold14590 ReadM SNP 0044.scaffold00158 346457 1 C A - ScafM SNP 0044.scaffold00158 346575 1 T A scaffold14590 ScafM SNP 0044.scaffold00158 346754 1 T G scaffold14590 ScafM INDEL 0044.scaffold00158 346996 13 ............. GAAATATACAGAA scaffold14590 Both SNP 0044.scaffold00158 347091 1 A G scaffold14590 Both INDEL 0044.scaffold00158 347183 1 . C scaffold14590 ReadM SNP 0044.scaffold00158 347408 1 A C - ReadM SNP 0044.scaffold00158 347606 1 T C - ScafM SNP 0044.scaffold00158 348263 1 C G scaffold14590 Both SNP 0044.scaffold00158 348854 1 T G scaffold14590 ReadM SNP 0044.scaffold00158 349952 1 G C - ReadM SNP 0044.scaffold00158 350501 1 G A - ReadM SNP 0044.scaffold00158 350552 1 A G - ReadM INDEL 0044.scaffold00158 350572 1 A . - ReadM SNP 0044.scaffold00158 350698 1 A C - ScafM SNP 0044.scaffold00158 350995 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 351026 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 351030 1 T C scaffold34554 ScafM INDEL 0044.scaffold00158 351068 2 .. AT scaffold34554 ScafM SNP 0044.scaffold00158 351078 1 C A scaffold34554 ScafM SNP 0044.scaffold00158 351122 1 A T scaffold34554 ScafM SNP 0044.scaffold00158 351137 1 G A scaffold34554 ScafM SNP 0044.scaffold00158 351150 1 G A scaffold34554 ScafM SNP 0044.scaffold00158 351162 1 T C scaffold34554 ScafM SNP 0044.scaffold00158 351204 1 A C scaffold34554 ScafM SNP 0044.scaffold00158 351214 1 C G scaffold34554 ScafM SNP 0044.scaffold00158 351293 1 C G scaffold34554 ScafM SNP 0044.scaffold00158 351385 1 T C scaffold34554 ScafM SNP 0044.scaffold00158 351415 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 351426 1 T C scaffold34554 ScafM SNP 0044.scaffold00158 351512 1 T A scaffold34554 ScafM SNP 0044.scaffold00158 351561 1 T C scaffold34554 ScafM SNP 0044.scaffold00158 351622 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 351698 1 G T scaffold34554 ScafM SNP 0044.scaffold00158 351751 1 A G scaffold34554 ScafM SNP 0044.scaffold00158 351770 1 C T scaffold34554 ScafM INDEL 0044.scaffold00158 351798 1 . T scaffold34554 ScafM SNP 0044.scaffold00158 351811 1 A G scaffold34554 ScafM SNP 0044.scaffold00158 351823 1 A T scaffold34554 Both SNP 0044.scaffold00158 351825 1 C A scaffold34554 ScafM SNP 0044.scaffold00158 351849 1 C T scaffold34554 ScafM SNP 0044.scaffold00158 351950 2 TA AG scaffold34554 ScafM SNP 0044.scaffold00158 351994 1 A T scaffold34554 ScafM SNP 0044.scaffold00158 352006 1 T C scaffold34554 ScafM SNP 0044.scaffold00158 352008 1 G A scaffold34554 ScafM SNP 0044.scaffold00158 352029 1 C A scaffold34554 Both SNP 0044.scaffold00158 352320 1 G A scaffold18227 Both SNP 0044.scaffold00158 352335 1 G C scaffold18227 ScafM SNP 0044.scaffold00158 352430 1 G A scaffold18227 ScafM SNP 0044.scaffold00158 352455 1 T C scaffold18227 ReadM SNP 0044.scaffold00158 353136 1 C T - ReadM SNP 0044.scaffold00158 353541 1 A G - ReadM SNP 0044.scaffold00158 353687 1 A T - ReadM SNP 0044.scaffold00158 354120 1 C T - ScafM SNP 0044.scaffold00158 354279 1 C G scaffold19255 ScafM SNP 0044.scaffold00158 354326 1 C T scaffold19255 Both SNP 0044.scaffold00158 354330 1 T G scaffold19255 ScafM SNP 0044.scaffold00158 354332 1 A T scaffold19255 ScafM SNP 0044.scaffold00158 354395 1 A C scaffold19255 ScafM SNP 0044.scaffold00158 354429 1 G A scaffold19255 ScafM SNP 0044.scaffold00158 354439 1 A T scaffold19255 ScafM SNP 0044.scaffold00158 354468 1 C A scaffold19255 Both SNP 0044.scaffold00158 354674 1 C T scaffold19255 ScafM SNP 0044.scaffold00158 354936 1 G A scaffold19255 ScafM SNP 0044.scaffold00158 354984 1 T C scaffold19255 ScafM SNP 0044.scaffold00158 355023 1 C G scaffold19255 ScafM INDEL 0044.scaffold00158 355066 2 .A GC scaffold19255 ScafM SNP 0044.scaffold00158 355100 2 TT GC scaffold19255 ScafM INDEL 0044.scaffold00158 355116 31 GGGGGGAACACGCGACGACTCGGGAGAGGGA ............................... scaffold19255 ScafM INDEL 0044.scaffold00158 355178 1 G . scaffold19255 ScafM SNP 0044.scaffold00158 355191 1 T C scaffold19255 ScafM SNP 0044.scaffold00158 355196 1 C A scaffold19255 ScafM INDEL 0044.scaffold00158 355211 2 .. GC scaffold19255 ScafM INDEL 0044.scaffold00158 355216 1 . A scaffold19255 ScafM SNP 0044.scaffold00158 355258 1 T G scaffold19255 ReadM SNP 0044.scaffold00158 355876 1 C T - ScafM SNP 0044.scaffold00158 361034 1 G A scaffold5425 ScafM SNP 0044.scaffold00158 361074 1 C A scaffold5425 ScafM SNP 0044.scaffold00158 361109 1 T C scaffold5425 ScafM SNP 0044.scaffold00158 361180 1 C T scaffold5425 ScafM SNP 0044.scaffold00158 361240 1 T C scaffold5425 ScafM SNP 0044.scaffold00158 361267 1 G A scaffold5425 ScafM SNP 0044.scaffold00158 361279 1 G A scaffold5425 ScafM SNP 0044.scaffold00158 361292 1 T G scaffold5425 ScafM SNP 0044.scaffold00158 361298 1 A G scaffold5425 ScafM SNP 0044.scaffold00158 361302 2 TA CT scaffold5425 Both SNP 0044.scaffold00158 361305 1 A G scaffold5425 ScafM SNP 0044.scaffold00158 361353 1 G C scaffold5425 ReadM SNP 0044.scaffold00158 361436 1 A G - ReadM INDEL 0044.scaffold00158 362800 1 . T - ReadM SNP 0044.scaffold00158 362929 1 C G - ScafM SNP 0044.scaffold00158 362977 1 C A scaffold62476 ScafM SNP 0044.scaffold00158 362995 1 T C scaffold62476 ScafM SNP 0044.scaffold00158 363078 1 A G scaffold62476 ScafM SNP 0044.scaffold00158 363203 1 G A scaffold62476 ScafM INDEL 0044.scaffold00158 363228 7 AAAGAAA ....... scaffold62476 ScafM SNP 0044.scaffold00158 363470 1 G A scaffold62476 ScafM SNP 0044.scaffold00158 363529 1 G A scaffold62476 ScafM SNP 0044.scaffold00158 363657 1 T A scaffold62476 ScafM SNP 0044.scaffold00158 363697 1 G A scaffold62476 ScafM SNP 0044.scaffold00158 363712 1 A G scaffold62476 ScafM SNP 0044.scaffold00158 363722 1 T C scaffold62476 ScafM SNP 0044.scaffold00158 367072 1 C T scaffold3399 ScafM SNP 0044.scaffold00158 367091 1 A C scaffold3399 ScafM SNP 0044.scaffold00158 367093 1 T C scaffold3399 ScafM SNP 0044.scaffold00158 367172 1 T G scaffold3399 ScafM SNP 0044.scaffold00158 367255 1 C A scaffold3399 ScafM SNP 0044.scaffold00158 367280 1 G A scaffold3399 ScafM SNP 0044.scaffold00158 367288 1 A T scaffold3399 ScafM SNP 0044.scaffold00158 367300 1 T G scaffold3399 ScafM SNP 0044.scaffold00158 367311 1 A G scaffold3399 ScafM SNP 0044.scaffold00158 369879 2 AA CT scaffold13533 ScafM SNP 0044.scaffold00158 369899 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 369929 1 A G scaffold13533 ScafM INDEL 0044.scaffold00158 369934 1 . T scaffold13533 ScafM SNP 0044.scaffold00158 369940 1 G A scaffold13533 ScafM SNP 0044.scaffold00158 369945 2 GC TT scaffold13533 ScafM SNP 0044.scaffold00158 369952 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 369958 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 369961 2 CT TG scaffold13533 ScafM INDEL 0044.scaffold00158 369972 2 .G AT scaffold13533 ScafM SNP 0044.scaffold00158 369976 1 G T scaffold13533 ScafM INDEL 0044.scaffold00158 369981 1 C . scaffold13533 ScafM INDEL 0044.scaffold00158 369984 1 T . scaffold13533 ScafM SNP 0044.scaffold00158 369994 1 G T scaffold13533 ScafM SNP 0044.scaffold00158 370016 2 TC GT scaffold13533 ScafM SNP 0044.scaffold00158 370020 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370032 1 C A scaffold13533 ScafM SNP 0044.scaffold00158 370035 1 T G scaffold13533 ScafM SNP 0044.scaffold00158 370039 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 370056 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 370059 1 C A scaffold13533 ScafM SNP 0044.scaffold00158 370065 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370067 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370071 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370076 1 A C scaffold13533 ScafM SNP 0044.scaffold00158 370088 1 T G scaffold13533 ScafM SNP 0044.scaffold00158 370106 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370109 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370111 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 370118 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370131 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370142 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370144 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370146 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370152 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370155 2 GT TC scaffold13533 ScafM SNP 0044.scaffold00158 370158 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370161 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370168 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370173 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370178 1 C G scaffold13533 ScafM SNP 0044.scaffold00158 370193 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370204 3 TCC ATG scaffold13533 ScafM SNP 0044.scaffold00158 370211 1 C G scaffold13533 ScafM INDEL 0044.scaffold00158 370218 2 CA .T scaffold13533 ScafM SNP 0044.scaffold00158 370221 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370223 3 CAT TTG scaffold13533 ScafM SNP 0044.scaffold00158 370237 2 AG GA scaffold13533 ScafM INDEL 0044.scaffold00158 370250 1 T . scaffold13533 ScafM SNP 0044.scaffold00158 370254 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370256 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370267 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370286 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370294 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370347 1 T G scaffold13533 ScafM SNP 0044.scaffold00158 370356 1 T G scaffold13533 ScafM SNP 0044.scaffold00158 370362 1 G A scaffold13533 ScafM SNP 0044.scaffold00158 370367 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370387 2 GT CC scaffold13533 ScafM SNP 0044.scaffold00158 370405 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370414 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370436 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370438 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370442 1 A G scaffold13533 ScafM INDEL 0044.scaffold00158 370456 1 A . scaffold13533 ScafM SNP 0044.scaffold00158 370460 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370464 1 A C scaffold13533 ScafM SNP 0044.scaffold00158 370468 2 CA TG scaffold13533 ScafM INDEL 0044.scaffold00158 370472 1 A . scaffold13533 ScafM SNP 0044.scaffold00158 370482 1 T C scaffold13533 ScafM INDEL 0044.scaffold00158 370483 2 .. GC scaffold13533 ScafM SNP 0044.scaffold00158 370484 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370486 3 AAT GCC scaffold13533 ScafM SNP 0044.scaffold00158 370490 1 A T scaffold13533 ScafM INDEL 0044.scaffold00158 370493 1 T . scaffold13533 ScafM SNP 0044.scaffold00158 370495 1 C A scaffold13533 ScafM INDEL 0044.scaffold00158 370498 2 .. GC scaffold13533 ScafM SNP 0044.scaffold00158 370502 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370505 1 A G scaffold13533 ScafM SNP 0044.scaffold00158 370518 2 TA CT scaffold13533 ScafM SNP 0044.scaffold00158 370523 2 CC GT scaffold13533 ScafM SNP 0044.scaffold00158 370533 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370536 1 A G scaffold13533 ScafM INDEL 0044.scaffold00158 370548 1 G . scaffold13533 ScafM SNP 0044.scaffold00158 370550 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 370552 1 A T scaffold13533 ScafM SNP 0044.scaffold00158 370567 2 TC CT scaffold13533 ScafM SNP 0044.scaffold00158 370573 1 C G scaffold13533 ScafM SNP 0044.scaffold00158 370582 1 T C scaffold13533 ScafM SNP 0044.scaffold00158 370584 1 A C scaffold13533 ScafM SNP 0044.scaffold00158 370589 1 A C scaffold13533 ScafM SNP 0044.scaffold00158 370591 1 G C scaffold13533 ScafM SNP 0044.scaffold00158 370593 1 C T scaffold13533 ScafM SNP 0044.scaffold00158 370597 1 T A scaffold13533 ScafM SNP 0044.scaffold00158 370605 2 TT CC scaffold13533 ScafM SNP 0044.scaffold00158 374136 1 A G scaffold19255 ScafM SNP 0044.scaffold00158 374149 1 C T scaffold19255 ScafM SNP 0044.scaffold00158 374196 1 G A scaffold19255 ScafM SNP 0044.scaffold00158 374269 1 C A scaffold19255 ScafM SNP 0044.scaffold00158 374297 2 TG AA scaffold19255 ReadM SNP 0044.scaffold00158 378154 1 C T - ReadM SNP 0044.scaffold00158 378220 1 T C - ReadM INDEL 0044.scaffold00158 378879 1 C . - ReadM INDEL 0044.scaffold00158 379044 1 . T - Both INDEL 0044.scaffold00158 379129 1 . T scaffold5539 Both SNP 0044.scaffold00158 379227 1 C T scaffold5539 ScafM INDEL 0044.scaffold00158 379558 1 A . scaffold5539 ScafM SNP 0044.scaffold00158 379583 1 T C scaffold5539 ScafM INDEL 0044.scaffold00158 379601 8 AACATTTA ........ scaffold5539 ScafM SNP 0044.scaffold00158 380302 1 A G scaffold61020 Both INDEL 0044.scaffold00158 380423 1 G . scaffold61020 Both SNP 0044.scaffold00158 380622 1 T C scaffold61020 ScafM INDEL 0044.scaffold00158 380702 1 . A scaffold61020 Both SNP 0044.scaffold00158 380829 1 G A scaffold61020 ScafM SNP 0044.scaffold00158 380894 1 C T scaffold61020 ScafM SNP 0044.scaffold00158 380899 1 G T scaffold61020 Both SNP 0044.scaffold00158 380975 1 A G scaffold61020 ScafM SNP 0044.scaffold00158 381170 1 C T scaffold61020 ScafM INDEL 0044.scaffold00158 381190 8 GTTAAGAC ........ scaffold61020 ScafM INDEL 0044.scaffold00158 381314 2 AA .. scaffold61020 ScafM SNP 0044.scaffold00158 381324 1 T A scaffold61020 ScafM SNP 0044.scaffold00158 382037 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382145 1 T G scaffold520 ScafM SNP 0044.scaffold00158 382199 1 A T scaffold520 ScafM SNP 0044.scaffold00158 382230 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382269 1 T C scaffold520 ScafM SNP 0044.scaffold00158 382274 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382287 1 G C scaffold520 ScafM SNP 0044.scaffold00158 382300 1 C G scaffold520 ScafM SNP 0044.scaffold00158 382355 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382414 1 A G scaffold520 ScafM SNP 0044.scaffold00158 382438 1 T C scaffold520 ScafM INDEL 0044.scaffold00158 382445 1 T . scaffold520 ScafM INDEL 0044.scaffold00158 382448 1 T . scaffold520 ScafM SNP 0044.scaffold00158 382460 1 T C scaffold520 ScafM SNP 0044.scaffold00158 382561 2 TG CA scaffold520 ScafM SNP 0044.scaffold00158 382643 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382708 1 C T scaffold520 ScafM SNP 0044.scaffold00158 382756 1 G A scaffold520 Both SNP 0044.scaffold00158 382937 1 T G scaffold520 ReadM SNP 0044.scaffold00158 383271 1 T G - Both SNP 0044.scaffold00158 383322 1 C T scaffold44712 ScafM SNP 0044.scaffold00158 383373 1 T C scaffold44712 ScafM SNP 0044.scaffold00158 383433 1 G C scaffold44712 Both SNP 0044.scaffold00158 383622 1 A C scaffold44712 ScafM SNP 0044.scaffold00158 383625 1 A G scaffold44712 ScafM SNP 0044.scaffold00158 383633 1 C T scaffold44712 ScafM SNP 0044.scaffold00158 383669 1 A G scaffold44712 ScafM SNP 0044.scaffold00158 383684 1 G A scaffold44712 ScafM SNP 0044.scaffold00158 383711 1 G T scaffold44712 ScafM SNP 0044.scaffold00158 383739 1 C T scaffold44712 ScafM INDEL 0044.scaffold00158 383777 2 .. AA scaffold44712 ReadM SNP 0044.scaffold00158 384068 1 T G - ReadM SNP 0044.scaffold00158 385996 1 C T - ReadM SNP 0044.scaffold00158 385999 1 T G - ReadM SNP 0044.scaffold00158 386074 1 A G - ReadM SNP 0044.scaffold00158 386235 1 A G - ReadM SNP 0044.scaffold00158 386540 1 C G - ReadM SNP 0044.scaffold00158 386832 1 A T - ReadM SNP 0044.scaffold00158 386909 1 T C - ReadM SNP 0044.scaffold00158 386921 1 T C - ReadM SNP 0044.scaffold00158 387033 1 C A - ReadM SNP 0044.scaffold00158 387261 1 T C - ReadM SNP 0044.scaffold00158 387268 1 A G - ReadM SNP 0044.scaffold00158 387435 1 A T - Both SNP 0044.scaffold00158 387622 1 A G scaffold40489 ScafM SNP 0044.scaffold00158 387626 1 C T scaffold40489 ReadM SNP 0044.scaffold00158 387753 1 A C - ReadM SNP 0044.scaffold00158 388180 1 G A - ReadM SNP 0044.scaffold00158 388492 1 T C - ReadM SNP 0044.scaffold00158 390002 1 T A - ReadM SNP 0044.scaffold00158 391166 1 A G - ReadM SNP 0044.scaffold00158 391384 1 T C - ReadM SNP 0044.scaffold00158 391566 1 A G - ReadM SNP 0044.scaffold00158 391581 1 G A - ReadM SNP 0044.scaffold00158 391610 1 A G - ReadM SNP 0044.scaffold00158 393194 1 T A - ReadM SNP 0044.scaffold00158 393533 1 C T - ReadM SNP 0044.scaffold00158 394136 1 C T - ReadM SNP 0044.scaffold00158 394653 1 A C - ScafM SNP 0044.scaffold00158 395177 1 A C scaffold4644 ScafM SNP 0044.scaffold00158 395191 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395195 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395200 1 G C scaffold4644 ScafM SNP 0044.scaffold00158 395210 1 C A scaffold4644 ScafM SNP 0044.scaffold00158 395212 1 A G scaffold4644 ScafM SNP 0044.scaffold00158 395215 1 A G scaffold4644 ScafM SNP 0044.scaffold00158 395221 1 A T scaffold4644 ScafM SNP 0044.scaffold00158 395240 1 C A scaffold4644 ScafM INDEL 0044.scaffold00158 395249 7 AGAAAAG ....... scaffold4644 Both SNP 0044.scaffold00158 395270 1 T A scaffold4644 ScafM SNP 0044.scaffold00158 395276 1 T C scaffold4644 ScafM SNP 0044.scaffold00158 395279 1 A T scaffold4644 ScafM SNP 0044.scaffold00158 395282 1 C T scaffold4644 ScafM INDEL 0044.scaffold00158 395293 7 ....... AGAATAT scaffold4644 ScafM SNP 0044.scaffold00158 395306 2 AC TA scaffold4644 ReadM SNP 0044.scaffold00158 395307 1 C G - ScafM INDEL 0044.scaffold00158 395310 1 . T scaffold4644 ScafM INDEL 0044.scaffold00158 395313 1 . A scaffold4644 ScafM SNP 0044.scaffold00158 395324 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395340 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395343 1 A T scaffold4644 ScafM SNP 0044.scaffold00158 395356 1 G C scaffold4644 ScafM SNP 0044.scaffold00158 395374 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395378 1 T A scaffold4644 Both SNP 0044.scaffold00158 395380 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395387 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395410 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395412 1 C A scaffold4644 ScafM SNP 0044.scaffold00158 395418 1 C T scaffold4644 ScafM INDEL 0044.scaffold00158 395434 1 . A scaffold4644 ScafM SNP 0044.scaffold00158 395437 1 T A scaffold4644 Both SNP 0044.scaffold00158 395440 1 T G scaffold4644 ScafM SNP 0044.scaffold00158 395443 1 C A scaffold4644 ScafM SNP 0044.scaffold00158 395458 1 A C scaffold4644 Both SNP 0044.scaffold00158 395467 1 A C scaffold4644 ScafM SNP 0044.scaffold00158 395484 1 A C scaffold4644 ScafM SNP 0044.scaffold00158 395490 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395500 1 A C scaffold4644 ScafM INDEL 0044.scaffold00158 395516 4 ACCA .... scaffold4644 ScafM INDEL 0044.scaffold00158 395522 15 ATATCTATAATAATA ............... scaffold4644 ScafM SNP 0044.scaffold00158 395545 1 T C scaffold4644 ScafM SNP 0044.scaffold00158 395597 1 C A scaffold4644 ScafM SNP 0044.scaffold00158 395620 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395626 2 AG TT scaffold4644 ScafM SNP 0044.scaffold00158 395631 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395662 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 395680 1 T C scaffold4644 ScafM SNP 0044.scaffold00158 395685 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395714 1 T C scaffold4644 ScafM SNP 0044.scaffold00158 395734 1 T A scaffold4644 ScafM SNP 0044.scaffold00158 395752 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 395788 1 T G scaffold4644 ScafM SNP 0044.scaffold00158 395799 1 A T scaffold4644 ScafM INDEL 0044.scaffold00158 395815 1 C . scaffold4644 ScafM SNP 0044.scaffold00158 395843 1 C T scaffold4644 ScafM INDEL 0044.scaffold00158 395859 1 T . scaffold4644 ReadM SNP 0044.scaffold00158 395928 1 G A - ScafM SNP 0044.scaffold00158 396128 1 C G scaffold28413 ScafM SNP 0044.scaffold00158 396137 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 396172 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 396185 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 396198 1 G T scaffold28413 ScafM SNP 0044.scaffold00158 396200 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 396203 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 396211 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 396226 1 C A scaffold28413 ScafM SNP 0044.scaffold00158 396251 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 396259 1 T A scaffold28413 ScafM SNP 0044.scaffold00158 396268 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 396273 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 396289 2 CG TA scaffold28413 ScafM SNP 0044.scaffold00158 396298 1 T G scaffold28413 ScafM SNP 0044.scaffold00158 396309 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 396323 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 396350 1 T A scaffold28413 ScafM SNP 0044.scaffold00158 396354 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 396382 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 396397 2 TC AT scaffold28413 ScafM SNP 0044.scaffold00158 399504 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 399512 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399516 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 399522 2 AA GT scaffold28413 ScafM SNP 0044.scaffold00158 399541 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 399544 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 399551 1 C A scaffold28413 ScafM SNP 0044.scaffold00158 399555 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 399560 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 399575 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 399577 1 C A scaffold28413 ScafM SNP 0044.scaffold00158 399587 2 AA GT scaffold28413 ScafM SNP 0044.scaffold00158 399599 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 399611 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 399644 1 G C scaffold28413 ScafM SNP 0044.scaffold00158 399663 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399672 2 CA TG scaffold28413 ScafM SNP 0044.scaffold00158 399678 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 399693 3 TTG CGA scaffold28413 ScafM SNP 0044.scaffold00158 399710 1 T G scaffold28413 ScafM SNP 0044.scaffold00158 399724 1 T G scaffold28413 ScafM SNP 0044.scaffold00158 399740 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 399742 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 399756 1 T G scaffold28413 ScafM SNP 0044.scaffold00158 399770 1 A T scaffold28413 ScafM SNP 0044.scaffold00158 399772 1 C A scaffold28413 ScafM SNP 0044.scaffold00158 399778 1 T G scaffold28413 ScafM SNP 0044.scaffold00158 399806 1 A C scaffold28413 ScafM SNP 0044.scaffold00158 399815 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399868 1 C G scaffold28413 ScafM SNP 0044.scaffold00158 399871 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399882 1 G A scaffold28413 ScafM SNP 0044.scaffold00158 399895 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 399897 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 399899 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399905 1 C A scaffold28413 ScafM SNP 0044.scaffold00158 399911 1 A T scaffold28413 ReadM SNP 0044.scaffold00158 399912 1 A T - ScafM INDEL 0044.scaffold00158 399915 1 . C scaffold28413 ScafM INDEL 0044.scaffold00158 399933 1 G . scaffold28413 ScafM SNP 0044.scaffold00158 399935 1 T C scaffold28413 ScafM INDEL 0044.scaffold00158 399939 1 T . scaffold28413 ScafM SNP 0044.scaffold00158 399941 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 399943 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 399946 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399958 1 C G scaffold28413 ScafM SNP 0044.scaffold00158 399963 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 399986 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 399995 2 TT GG scaffold28413 ScafM SNP 0044.scaffold00158 400008 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 400017 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 400020 1 A G scaffold28413 ScafM SNP 0044.scaffold00158 400024 1 T C scaffold28413 ScafM SNP 0044.scaffold00158 400029 1 C T scaffold28413 ScafM SNP 0044.scaffold00158 400034 1 C G scaffold28413 ReadM SNP 0044.scaffold00158 400572 1 A T - ReadM SNP 0044.scaffold00158 400647 1 G T - ReadM SNP 0044.scaffold00158 400815 1 T C - ScafM SNP 0044.scaffold00158 401105 1 T C scaffold26093 ScafM INDEL 0044.scaffold00158 401115 3 TTT ... scaffold26093 ScafM SNP 0044.scaffold00158 401220 1 G T scaffold26093 ScafM INDEL 0044.scaffold00158 401263 2 AA .. scaffold26093 ScafM SNP 0044.scaffold00158 401318 1 A G scaffold26093 ScafM INDEL 0044.scaffold00158 401345 1 . C scaffold26093 ScafM SNP 0044.scaffold00158 401385 1 G C scaffold26093 ScafM SNP 0044.scaffold00158 401396 1 G A scaffold26093 ScafM INDEL 0044.scaffold00158 401428 1 . C scaffold26093 ScafM SNP 0044.scaffold00158 401442 1 T G scaffold26093 ScafM INDEL 0044.scaffold00158 401540 1 T . scaffold26093 ScafM SNP 0044.scaffold00158 403294 1 A G scaffold20606 ScafM INDEL 0044.scaffold00158 403394 4 ATCT .... scaffold20606 ScafM SNP 0044.scaffold00158 403441 1 A C scaffold20606 Both SNP 0044.scaffold00158 403511 1 T A scaffold20606 ScafM SNP 0044.scaffold00158 404668 1 C T scaffold26093 ScafM SNP 0044.scaffold00158 404678 1 A T scaffold26093 ScafM SNP 0044.scaffold00158 404738 1 C T scaffold26093 ScafM SNP 0044.scaffold00158 404744 1 G T scaffold26093 ScafM SNP 0044.scaffold00158 404747 1 T G scaffold26093 ScafM SNP 0044.scaffold00158 404773 1 A C scaffold26093 ScafM SNP 0044.scaffold00158 404950 1 A G scaffold26093 ScafM SNP 0044.scaffold00158 404962 1 A T scaffold26093 ScafM SNP 0044.scaffold00158 404975 1 A G scaffold26093 ScafM SNP 0044.scaffold00158 405208 1 C A scaffold26093 ReadM INDEL 0044.scaffold00158 405332 2 TT .. - ReadM SNP 0044.scaffold00158 405783 1 T C - ScafM SNP 0044.scaffold00158 405874 1 A T scaffold26093 ScafM SNP 0044.scaffold00158 405904 1 A G scaffold26093 ScafM SNP 0044.scaffold00158 405930 2 TA AT scaffold26093 ScafM SNP 0044.scaffold00158 405960 1 C T scaffold26093 ScafM SNP 0044.scaffold00158 405981 1 A T scaffold26093 ScafM SNP 0044.scaffold00158 406041 1 C T scaffold26093 ScafM SNP 0044.scaffold00158 406043 1 C T scaffold26093 ScafM SNP 0044.scaffold00158 406184 1 T C scaffold26093 Both SNP 0044.scaffold00158 406224 1 T C scaffold26093 ScafM SNP 0044.scaffold00158 406445 1 G T scaffold26093 ScafM INDEL 0044.scaffold00158 406446 1 . G scaffold26093 ScafM SNP 0044.scaffold00158 406449 2 AA TT scaffold26093 ScafM SNP 0044.scaffold00158 406453 1 G A scaffold26093 ScafM INDEL 0044.scaffold00158 406456 1 G . scaffold26093 ScafM SNP 0044.scaffold00158 406578 1 G T scaffold26093 ReadM SNP 0044.scaffold00158 406985 2 TT CC - ReadM SNP 0044.scaffold00158 407264 1 T C - ReadM SNP 0044.scaffold00158 407859 1 T A - ReadM SNP 0044.scaffold00158 407964 1 T G - Both SNP 0044.scaffold00158 408155 1 G C scaffold26093 ScafM SNP 0044.scaffold00158 408200 2 TT CA scaffold26093 ScafM SNP 0044.scaffold00158 408532 1 A T scaffold26093 ScafM SNP 0044.scaffold00158 408550 1 G A scaffold26093 ScafM INDEL 0044.scaffold00158 408637 1 C . scaffold26093 ScafM SNP 0044.scaffold00158 408661 1 G A scaffold26093 ReadM SNP 0044.scaffold00158 408736 1 T C - ReadM SNP 0044.scaffold00158 420848 1 T A - ReadM SNP 0044.scaffold00158 420891 1 T C - ReadM INDEL 0044.scaffold00158 421412 1 A . - ReadM SNP 0044.scaffold00158 421751 1 A G - ReadM SNP 0044.scaffold00158 421909 1 A G - ReadM SNP 0044.scaffold00158 422395 1 C T - ReadM SNP 0044.scaffold00158 423109 1 G A - ScafM SNP 0044.scaffold00158 423139 1 T C scaffold4644 ScafM SNP 0044.scaffold00158 423146 1 T A scaffold4644 ScafM SNP 0044.scaffold00158 423157 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 423161 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 423179 1 C A scaffold4644 ScafM SNP 0044.scaffold00158 423181 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 423188 1 G A scaffold4644 ScafM SNP 0044.scaffold00158 423194 1 G C scaffold4644 Both SNP 0044.scaffold00158 423223 1 C G scaffold4644 ScafM SNP 0044.scaffold00158 423229 1 A T scaffold4644 ScafM SNP 0044.scaffold00158 423232 1 G C scaffold4644 ScafM SNP 0044.scaffold00158 423245 1 C T scaffold4644 ScafM SNP 0044.scaffold00158 423256 1 G A scaffold4644 ScafM INDEL 0044.scaffold00158 423264 1 . A scaffold4644 ScafM INDEL 0044.scaffold00158 423270 2 .. AC scaffold4644 ScafM SNP 0044.scaffold00158 423272 1 T A scaffold4644 ScafM SNP 0044.scaffold00158 423276 2 CG GA scaffold4644 ScafM INDEL 0044.scaffold00158 423315 1 A . scaffold4644 ScafM SNP 0044.scaffold00158 423321 1 C G scaffold4644 ScafM INDEL 0044.scaffold00158 424966 2 .. TG scaffold3238 ScafM INDEL 0044.scaffold00158 424995 1 . C scaffold3238 ScafM SNP 0044.scaffold00158 425005 1 G A scaffold3238 Both SNP 0044.scaffold00158 425243 1 G T scaffold30999 ScafM SNP 0044.scaffold00158 425442 1 G A scaffold55467 ScafM SNP 0044.scaffold00158 425462 1 G A scaffold55467 ScafM SNP 0044.scaffold00158 425471 2 AG TA scaffold55467 ScafM INDEL 0044.scaffold00158 425483 9 ATAAAAAAA ......... scaffold55467 ScafM SNP 0044.scaffold00158 425537 1 T C scaffold55467 ScafM SNP 0044.scaffold00158 425754 1 C G scaffold30999 ScafM SNP 0044.scaffold00158 426151 1 C A scaffold30999 ScafM INDEL 0044.scaffold00158 426181 3 TTA ... scaffold30999 ScafM SNP 0044.scaffold00158 426286 1 A T scaffold30999 Both SNP 0044.scaffold00158 426477 1 C G scaffold30999 ScafM SNP 0044.scaffold00158 426720 1 T C scaffold30999 ScafM SNP 0044.scaffold00158 426758 1 T A scaffold30999 ScafM SNP 0044.scaffold00158 426841 1 T A scaffold30999 ScafM SNP 0044.scaffold00158 426905 1 T C scaffold30999 ReadM SNP 0044.scaffold00158 429745 1 A G - ReadM INDEL 0044.scaffold00158 430000 1 T . - ReadM SNP 0044.scaffold00158 430109 1 G A - ReadM SNP 0044.scaffold00158 430395 1 T C - ReadM SNP 0044.scaffold00158 430481 1 A G - ReadM SNP 0044.scaffold00158 430588 1 A G - ReadM SNP 0044.scaffold00158 430630 1 T C - ReadM SNP 0044.scaffold00158 430633 1 T C - ReadM SNP 0044.scaffold00158 430860 1 C T - ReadM SNP 0044.scaffold00158 431085 1 G A - ReadM SNP 0044.scaffold00158 431115 1 G A - ReadM SNP 0044.scaffold00158 431146 1 T G - ReadM SNP 0044.scaffold00158 431434 1 C T - ReadM SNP 0044.scaffold00158 431559 1 A G - ReadM SNP 0044.scaffold00158 434230 1 T C - ReadM SNP 0044.scaffold00158 434514 1 T A - ReadM SNP 0044.scaffold00158 434576 1 A G - ReadM INDEL 0044.scaffold00158 434608 1 C . - ReadM SNP 0044.scaffold00158 434626 1 A G - ReadM SNP 0044.scaffold00158 434698 1 C A - ReadM SNP 0044.scaffold00158 434792 1 T C - ReadM SNP 0044.scaffold00158 434805 1 G A - ReadM SNP 0044.scaffold00158 435104 1 C T - Both SNP 0044.scaffold00158 435360 1 G A scaffold20480 Both SNP 0044.scaffold00158 435381 1 C T scaffold20480 ScafM INDEL 0044.scaffold00158 435407 27 ........................... ATGAGACTTAGTCAACAGGATAACTTG scaffold20480 ReadM SNP 0044.scaffold00158 435414 1 G T - ScafM SNP 0044.scaffold00158 435434 1 G A scaffold20480 Both SNP 0044.scaffold00158 435551 1 T G scaffold20480 Both SNP 0044.scaffold00158 435743 1 C A scaffold20480 ReadM SNP 0044.scaffold00158 435858 1 C T - ReadM INDEL 0044.scaffold00158 435870 1 A . - ReadM SNP 0044.scaffold00158 435904 1 A T - ReadM SNP 0044.scaffold00158 436036 1 T C - ReadM SNP 0044.scaffold00158 436298 1 G A - ReadM SNP 0044.scaffold00158 436316 1 A G - ReadM SNP 0044.scaffold00158 436406 1 G C - ReadM SNP 0044.scaffold00158 436408 1 T C - ReadM SNP 0044.scaffold00158 436592 1 A C - ReadM SNP 0044.scaffold00158 436799 1 C T - ReadM SNP 0044.scaffold00158 436918 1 A C - ReadM SNP 0044.scaffold00158 437171 1 A T - ReadM SNP 0044.scaffold00158 437418 1 C G - ReadM SNP 0044.scaffold00158 437445 1 C T - ReadM SNP 0044.scaffold00158 437537 1 A G - ReadM SNP 0044.scaffold00158 437946 1 G C - ReadM SNP 0044.scaffold00158 438015 1 C T - ReadM SNP 0044.scaffold00158 438188 1 C T - ReadM SNP 0044.scaffold00158 438362 1 G A - ReadM SNP 0044.scaffold00158 438395 1 A G - ReadM SNP 0044.scaffold00158 438544 1 A G - ReadM SNP 0044.scaffold00158 438597 1 A G - ReadM SNP 0044.scaffold00158 438964 1 G A - ScafM SNP 0044.scaffold00158 440103 1 C A scaffold20480 ReadM SNP 0044.scaffold00158 453331 1 C T - ReadM SNP 0044.scaffold00158 454506 1 C G - ReadM SNP 0044.scaffold00158 455255 1 C T - ReadM SNP 0044.scaffold00158 455933 1 T C - ReadM SNP 0044.scaffold00158 455962 1 A C - ReadM SNP 0044.scaffold00158 456010 1 C G - ReadM SNP 0044.scaffold00158 456035 1 T C - ScafM SNP 0044.scaffold00158 456151 1 A G scaffold4155 ScafM SNP 0044.scaffold00158 456173 2 GC AT scaffold4155 ScafM SNP 0044.scaffold00158 456197 1 T A scaffold4155 ScafM SNP 0044.scaffold00158 456207 1 A G scaffold4155 ScafM SNP 0044.scaffold00158 456217 1 A T scaffold4155 ScafM SNP 0044.scaffold00158 456222 1 T C scaffold4155 ScafM SNP 0044.scaffold00158 456244 1 T C scaffold4155 ScafM SNP 0044.scaffold00158 456250 1 G A scaffold4155 ScafM SNP 0044.scaffold00158 456253 1 A T scaffold4155 ScafM SNP 0044.scaffold00158 456255 1 A C scaffold4155 ScafM SNP 0044.scaffold00158 456260 1 C A scaffold4155 ScafM SNP 0044.scaffold00158 456262 1 A G scaffold4155 ScafM SNP 0044.scaffold00158 456264 1 A T scaffold4155 ScafM SNP 0044.scaffold00158 456277 2 TA AC scaffold4155 ScafM SNP 0044.scaffold00158 456290 1 A T scaffold4155 ScafM SNP 0044.scaffold00158 456346 1 G A scaffold4155 ScafM SNP 0044.scaffold00158 456375 1 G A scaffold4155 ScafM SNP 0044.scaffold00158 456393 1 C T scaffold4155 ReadM SNP 0044.scaffold00158 456680 1 C A - ReadM SNP 0044.scaffold00158 456759 1 G C - ReadM SNP 0044.scaffold00158 457260 1 C A - ReadM SNP 0044.scaffold00158 457290 1 C G - ReadM INDEL 0044.scaffold00158 457493 1 . A - ReadM SNP 0044.scaffold00158 457633 1 A T - ReadM SNP 0044.scaffold00158 457983 1 A G - ReadM SNP 0044.scaffold00158 458460 1 A G - Both SNP 0044.scaffold00158 458884 1 A G scaffold40524 Both SNP 0044.scaffold00158 458910 1 A G scaffold40524 ScafM INDEL 0044.scaffold00158 458975 1 . A scaffold40524 ScafM SNP 0044.scaffold00158 459012 1 A C scaffold40524 ScafM SNP 0044.scaffold00158 459020 1 T A scaffold40524 ScafM SNP 0044.scaffold00158 459027 1 G T scaffold40524 ScafM SNP 0044.scaffold00158 459112 1 C T scaffold40524 Both SNP 0044.scaffold00158 459118 1 T G scaffold40524 ScafM SNP 0044.scaffold00158 459189 1 T C scaffold40524 ReadM INDEL 0044.scaffold00158 459228 1 . T - ScafM SNP 0044.scaffold00158 459228 1 A G scaffold40524 ScafM INDEL 0044.scaffold00158 459231 1 . C scaffold40524 Both SNP 0044.scaffold00158 459239 1 G A scaffold40524 ScafM SNP 0044.scaffold00158 459252 1 G C scaffold40524 ScafM SNP 0044.scaffold00158 459295 1 C T scaffold40524 ScafM SNP 0044.scaffold00158 459303 1 C T scaffold40524 ScafM INDEL 0044.scaffold00158 460586 2 .. AA scaffold75574 ScafM SNP 0044.scaffold00158 460602 2 TT AC scaffold75574 ScafM INDEL 0044.scaffold00158 460740 1 . T scaffold75574 ScafM SNP 0044.scaffold00158 460813 1 T A scaffold75574 Both SNP 0044.scaffold00158 460944 1 G A scaffold75574 Both SNP 0044.scaffold00158 460955 1 G T scaffold75574 ScafM INDEL 0044.scaffold00158 461118 3 TAC ... scaffold75574 Both SNP 0044.scaffold00158 461245 1 G T scaffold75574 ScafM SNP 0044.scaffold00158 461326 1 G A scaffold75574 ScafM SNP 0044.scaffold00158 461330 1 A T scaffold75574 ScafM INDEL 0044.scaffold00158 461350 2 TT .. scaffold75574 Both SNP 0044.scaffold00158 461381 1 T C scaffold75574 Both INDEL 0044.scaffold00158 461508 1 . T scaffold75574 ScafM SNP 0044.scaffold00158 461619 1 C T scaffold75574 ScafM INDEL 0044.scaffold00158 461739 1 T . scaffold75574 ScafM SNP 0044.scaffold00158 461783 1 C T scaffold75574 ReadM SNP 0044.scaffold00158 464284 1 T C - ReadM SNP 0044.scaffold00158 464445 1 T C - ReadM SNP 0044.scaffold00158 464545 1 T C - ReadM SNP 0044.scaffold00158 464577 1 G A - ReadM SNP 0044.scaffold00158 464659 1 G A - ReadM SNP 0044.scaffold00158 464685 1 T A - ReadM SNP 0044.scaffold00158 464854 1 T G - ReadM SNP 0044.scaffold00158 465052 1 T A - ReadM SNP 0044.scaffold00158 465054 1 T C - ScafM SNP 0044.scaffold00158 465231 1 T C scaffold1220 ScafM SNP 0044.scaffold00158 465239 1 C T scaffold1220 ScafM SNP 0044.scaffold00158 465241 1 T G scaffold1220 ScafM SNP 0044.scaffold00158 465269 1 A T scaffold1220 ScafM INDEL 0044.scaffold00158 465273 3 TCC ... scaffold1220 ScafM INDEL 0044.scaffold00158 465278 3 CGT .AA scaffold1220 ScafM SNP 0044.scaffold00158 465283 1 G A scaffold1220 ScafM SNP 0044.scaffold00158 465286 2 AA CC scaffold1220 ScafM SNP 0044.scaffold00158 465289 2 TT AC scaffold1220 ScafM INDEL 0044.scaffold00158 465292 1 . A scaffold1220 ScafM SNP 0044.scaffold00158 465298 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465306 1 C T scaffold1220 ScafM SNP 0044.scaffold00158 465311 1 A C scaffold1220 ScafM SNP 0044.scaffold00158 465327 1 G T scaffold1220 ScafM SNP 0044.scaffold00158 465352 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465354 1 A T scaffold1220 ScafM INDEL 0044.scaffold00158 465387 1 G . scaffold1220 ScafM INDEL 0044.scaffold00158 465389 1 G . scaffold1220 ScafM SNP 0044.scaffold00158 465426 1 G A scaffold1220 ScafM SNP 0044.scaffold00158 465432 1 A T scaffold1220 ScafM SNP 0044.scaffold00158 465444 1 C T scaffold1220 ScafM SNP 0044.scaffold00158 465461 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465470 1 G A scaffold1220 ScafM SNP 0044.scaffold00158 465482 1 G C scaffold1220 ScafM INDEL 0044.scaffold00158 465486 1 T . scaffold1220 ScafM SNP 0044.scaffold00158 465502 1 C G scaffold1220 ScafM SNP 0044.scaffold00158 465506 3 TAG ACA scaffold1220 ScafM SNP 0044.scaffold00158 465522 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465545 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465564 1 T A scaffold1220 ScafM INDEL 0044.scaffold00158 465568 1 . A scaffold1220 ScafM SNP 0044.scaffold00158 465636 1 A G scaffold1220 ScafM SNP 0044.scaffold00158 465641 1 G T scaffold1220 ScafM SNP 0044.scaffold00158 465651 1 C T scaffold1220 ScafM INDEL 0044.scaffold00158 465657 3 TCG ... scaffold1220 ScafM INDEL 0044.scaffold00158 465668 1 T . scaffold1220 ScafM INDEL 0044.scaffold00158 465683 1 T . scaffold1220 ReadM SNP 0044.scaffold00158 468438 1 T A - ReadM INDEL 0044.scaffold00158 468466 1 . C - ReadM SNP 0044.scaffold00158 469109 1 C G - ReadM SNP 0044.scaffold00158 469135 1 T C - ReadM SNP 0044.scaffold00158 469228 1 C T - ReadM SNP 0044.scaffold00158 491053 1 C T - ReadM SNP 0044.scaffold00158 491221 1 T C - ReadM SNP 0044.scaffold00158 491677 1 C A - ReadM SNP 0044.scaffold00158 491751 1 A C - ReadM SNP 0044.scaffold00158 492933 1 G A - ReadM SNP 0044.scaffold00158 493019 1 G A - ReadM INDEL 0044.scaffold00158 499041 3 GTT ... - ReadM SNP 0044.scaffold00158 499358 1 T A - ReadM SNP 0044.scaffold00158 499406 1 C T - ReadM INDEL 0044.scaffold00158 499567 1 A . - ReadM SNP 0044.scaffold00158 499577 1 A G - ReadM SNP 0044.scaffold00158 499825 1 C A - ReadM SNP 0044.scaffold00158 500110 1 G A - ReadM INDEL 0044.scaffold00158 500380 1 . A - ReadM SNP 0044.scaffold00158 500715 1 A G - ReadM SNP 0044.scaffold00158 501152 1 G A - ReadM SNP 0044.scaffold00158 501286 1 A G - ReadM SNP 0044.scaffold00158 501304 1 A G - ReadM SNP 0044.scaffold00158 501645 1 A G - ScafM SNP 0044.scaffold00158 501796 1 T C scaffold21169 Both INDEL 0044.scaffold00158 501889 3 ... TCC scaffold21169 ScafM INDEL 0044.scaffold00158 501957 6 ...... TTTCAA scaffold21169 Both SNP 0044.scaffold00158 502623 1 T C scaffold21169 ScafM SNP 0044.scaffold00158 502664 1 T C scaffold21169 ScafM SNP 0044.scaffold00158 502675 1 G A scaffold21169 Both SNP 0044.scaffold00158 502909 1 C G scaffold21169 Both SNP 0044.scaffold00158 503471 1 A G scaffold21169 Both SNP 0044.scaffold00158 503627 1 A T scaffold21169 ReadM SNP 0044.scaffold00158 504031 1 A G - ReadM SNP 0044.scaffold00158 504058 1 G A - ReadM INDEL 0044.scaffold00158 504437 1 . C - ReadM SNP 0044.scaffold00158 504487 1 C T - ReadM SNP 0044.scaffold00158 504651 1 T A - ReadM SNP 0044.scaffold00158 504665 1 T C - ReadM SNP 0044.scaffold00158 505119 1 A G - ReadM SNP 0044.scaffold00158 505244 1 C T - ReadM SNP 0044.scaffold00158 505405 1 T C - Both SNP 0044.scaffold00158 505561 1 G A scaffold21169 ReadM SNP 0044.scaffold00158 506029 1 T C - ReadM SNP 0044.scaffold00158 506259 1 A C - ReadM SNP 0044.scaffold00158 506279 1 C T - ReadM INDEL 0044.scaffold00158 506366 1 T . - ReadM SNP 0044.scaffold00158 506372 1 A G - ReadM INDEL 0044.scaffold00158 506493 1 . A - ReadM SNP 0044.scaffold00158 506533 1 T A - ReadM SNP 0044.scaffold00158 506724 1 T C - ReadM SNP 0044.scaffold00158 508827 1 T A - ReadM SNP 0044.scaffold00158 508844 1 C T - ScafM SNP 0044.scaffold00158 512187 1 T A scaffold21169 ScafM SNP 0044.scaffold00158 512478 1 C T scaffold21169 ScafM SNP 0044.scaffold00158 512493 1 G T scaffold21169 ScafM SNP 0044.scaffold00158 512595 1 T C scaffold21169 ScafM SNP 0044.scaffold00158 512598 1 G A scaffold21169 Both SNP 0044.scaffold00158 512636 1 C T scaffold21169 Both SNP 0044.scaffold00158 512727 1 T C scaffold21169 Both INDEL 0044.scaffold00158 512778 1 . C scaffold21169 Both SNP 0044.scaffold00158 512800 1 A G scaffold21169 Both SNP 0044.scaffold00158 512955 1 G A scaffold21169 ScafM SNP 0044.scaffold00158 513037 1 C A scaffold21169 ScafM SNP 0044.scaffold00158 513107 1 T A scaffold21169 ScafM SNP 0044.scaffold00158 513110 1 A T scaffold21169 Both SNP 0044.scaffold00158 513118 1 G T scaffold21169 ScafM SNP 0044.scaffold00158 513483 1 C G scaffold21169 ScafM SNP 0044.scaffold00158 518073 1 A T scaffold21169 ScafM SNP 0044.scaffold00158 518084 1 G A scaffold21169 ScafM SNP 0044.scaffold00158 518098 1 A G scaffold21169 ReadM SNP 0044.scaffold00158 519002 1 G A - ReadM SNP 0044.scaffold00158 519152 1 G A - ReadM SNP 0044.scaffold00158 520127 1 T C - ReadM SNP 0044.scaffold00158 520929 1 G A - ReadM SNP 0044.scaffold00158 520998 1 A G - ReadM INDEL 0044.scaffold00158 521129 2 .. AT - ReadM SNP 0044.scaffold00158 521402 1 C T - ReadM SNP 0044.scaffold00158 521633 1 A G - ScafM INDEL 0044.scaffold00158 521722 7 CTCTGCC ....... scaffold21169 ReadM SNP 0044.scaffold00158 522526 1 C T - ReadM SNP 0044.scaffold00158 522637 1 A G - ReadM SNP 0044.scaffold00158 522982 1 T C - ReadM SNP 0044.scaffold00158 523094 1 T A - ReadM SNP 0044.scaffold00158 523870 1 C T - Both SNP 0044.scaffold00158 523890 1 A C scaffold21169 ReadM SNP 0044.scaffold00158 524291 1 A G - Both SNP 0044.scaffold00158 524483 1 T A scaffold21169 Both SNP 0044.scaffold00158 524792 1 T C scaffold21169 ScafM INDEL 0044.scaffold00158 524930 16 ................ TAAGGCCAAAGAGTTC scaffold21169 ScafM INDEL 0044.scaffold00158 525048 1 T . scaffold21169 Both INDEL 0044.scaffold00158 525091 1 . T scaffold21169 ScafM SNP 0044.scaffold00158 525147 1 A C scaffold21169 ScafM INDEL 0044.scaffold00158 525263 1 T . scaffold21169 Both SNP 0044.scaffold00158 525392 1 C T scaffold21169 ScafM INDEL 0044.scaffold00158 525409 3 TAG ... scaffold21169 ScafM SNP 0044.scaffold00158 525454 1 C A scaffold21169 ScafM SNP 0044.scaffold00158 525751 1 C T scaffold21169 ScafM SNP 0044.scaffold00158 525940 1 T G scaffold21169 ScafM SNP 0044.scaffold00158 526128 1 A G scaffold21169 ReadM SNP 0044.scaffold00158 526333 1 A T - ScafM SNP 0044.scaffold00158 527428 1 C T scaffold47894 ScafM SNP 0044.scaffold00158 527450 1 A G scaffold47894 ScafM SNP 0044.scaffold00158 527470 1 T A scaffold47894 ScafM SNP 0044.scaffold00158 527473 1 T C scaffold47894 ScafM SNP 0044.scaffold00158 527500 1 T C scaffold47894 ScafM SNP 0044.scaffold00158 527635 2 CA TG scaffold47894 ScafM SNP 0044.scaffold00158 527764 1 T C scaffold47894 ReadM SNP 0044.scaffold00158 528028 1 T C - ReadM SNP 0044.scaffold00158 528099 1 G A - ScafM INDEL 0044.scaffold00158 528390 1 . G scaffold47894 ScafM SNP 0044.scaffold00158 528437 2 TT AA scaffold47894 ScafM SNP 0044.scaffold00158 528483 1 C T scaffold47894 ScafM SNP 0044.scaffold00158 528511 1 C T scaffold47894 ScafM INDEL 0044.scaffold00158 528756 4 AGAA .... scaffold47894 ScafM INDEL 0044.scaffold00158 528764 1 G . scaffold47894 Both SNP 0044.scaffold00158 528822 1 A G scaffold47894 ReadM SNP 0044.scaffold00158 528903 1 T A - ReadM SNP 0044.scaffold00158 529900 1 T C - ReadM SNP 0044.scaffold00158 530683 1 A G - ScafM SNP 0044.scaffold00158 530944 1 G C scaffold64556 ScafM SNP 0044.scaffold00158 531103 1 A T scaffold1022 Both SNP 0044.scaffold00158 531117 1 T G scaffold1022 ScafM SNP 0044.scaffold00158 531123 1 T C scaffold1022 ScafM INDEL 0044.scaffold00158 531136 1 . A scaffold1022 ScafM SNP 0044.scaffold00158 531144 1 A G scaffold1022 ScafM SNP 0044.scaffold00158 531147 1 A G scaffold1022 ScafM SNP 0044.scaffold00158 531169 1 C T scaffold1022 ScafM SNP 0044.scaffold00158 531207 1 G C scaffold1022 ScafM SNP 0044.scaffold00158 531239 1 G T scaffold1022 ScafM SNP 0044.scaffold00158 531253 1 T G scaffold1022 ReadM SNP 0044.scaffold00158 531461 1 T C - ReadM SNP 0044.scaffold00158 531831 1 A G - ReadM SNP 0044.scaffold00158 531959 1 C T - ReadM SNP 0044.scaffold00158 531988 1 T G - ReadM SNP 0044.scaffold00158 532343 1 A T - ReadM SNP 0044.scaffold00158 532460 1 T C - ReadM INDEL 0044.scaffold00158 532589 1 T . - ReadM SNP 0044.scaffold00158 533165 1 A G - ReadM SNP 0044.scaffold00158 533263 1 T C - ReadM SNP 0044.scaffold00158 533400 1 A G - ReadM SNP 0044.scaffold00158 533523 1 A C - ReadM INDEL 0044.scaffold00158 533595 1 . G - ReadM INDEL 0044.scaffold00158 533923 1 C . - ReadM SNP 0044.scaffold00158 534021 1 T C - ReadM SNP 0044.scaffold00158 534031 1 A G - ReadM SNP 0044.scaffold00158 534139 1 A G - ReadM SNP 0044.scaffold00158 534237 1 A G - ReadM SNP 0044.scaffold00158 534410 1 G T - ReadM SNP 0044.scaffold00158 534714 1 T G - ReadM SNP 0044.scaffold00158 534994 1 T C - ReadM SNP 0044.scaffold00158 535373 1 A T - ReadM SNP 0044.scaffold00158 536248 1 T C - ReadM SNP 0044.scaffold00158 536272 1 C A - ReadM INDEL 0044.scaffold00158 536552 2 .. TT - ReadM SNP 0044.scaffold00158 536679 1 T C - ReadM SNP 0044.scaffold00158 540855 1 T C - ReadM SNP 0044.scaffold00158 540925 1 T C - ReadM SNP 0044.scaffold00158 541003 1 G C - ReadM INDEL 0044.scaffold00158 541030 3 ... GAA - ReadM SNP 0044.scaffold00158 541523 1 G C - ReadM SNP 0044.scaffold00158 541711 1 C A - ReadM SNP 0044.scaffold00158 541824 1 T G - ReadM SNP 0044.scaffold00158 542053 1 G A - ReadM SNP 0044.scaffold00158 542250 1 A G - ReadM SNP 0044.scaffold00158 542345 1 T A - ReadM SNP 0044.scaffold00158 542859 1 A G - ReadM SNP 0044.scaffold00158 542933 1 T A - ReadM SNP 0044.scaffold00158 542959 1 G A - ReadM SNP 0044.scaffold00158 542985 1 A T - ReadM SNP 0044.scaffold00158 543128 1 C G - ReadM SNP 0044.scaffold00158 543435 1 A G - ReadM SNP 0044.scaffold00158 543473 1 T C - ReadM SNP 0044.scaffold00158 544010 1 A G - ReadM SNP 0044.scaffold00158 544040 1 A G - ReadM SNP 0044.scaffold00158 544050 1 A C - ScafM SNP 0044.scaffold00158 544231 1 C G scaffold2859 Both SNP 0044.scaffold00158 544301 1 T C scaffold2859 Both SNP 0044.scaffold00158 544303 1 G C scaffold2859 ScafM INDEL 0044.scaffold00158 544326 1 . C scaffold2859 ReadM SNP 0044.scaffold00158 544769 1 C T - ReadM SNP 0044.scaffold00158 544785 1 C T - ReadM SNP 0044.scaffold00158 544861 1 T C - ReadM SNP 0044.scaffold00158 544905 1 T G - ReadM SNP 0044.scaffold00158 544980 1 T C - ReadM SNP 0044.scaffold00158 545006 1 A G - ReadM INDEL 0044.scaffold00158 545125 1 C . - ReadM SNP 0044.scaffold00158 545302 1 T C - ReadM SNP 0044.scaffold00158 545612 1 A G - ReadM SNP 0044.scaffold00158 545633 1 C G - ReadM SNP 0044.scaffold00158 545809 1 A T - ReadM SNP 0044.scaffold00158 545870 1 T A - ReadM SNP 0044.scaffold00158 546125 1 A C - ReadM SNP 0044.scaffold00158 546581 1 A G - ReadM SNP 0044.scaffold00158 546699 1 T C - ReadM SNP 0044.scaffold00158 546755 1 A G - ReadM SNP 0044.scaffold00158 546799 1 T C - ReadM SNP 0044.scaffold00158 546917 1 A G - ReadM SNP 0044.scaffold00158 547063 1 T C - ReadM SNP 0044.scaffold00158 547147 1 T C - ReadM SNP 0044.scaffold00158 547163 1 A G - ReadM SNP 0044.scaffold00158 547173 1 C A - ReadM SNP 0044.scaffold00158 547304 1 T A - ReadM SNP 0044.scaffold00158 547362 1 C T - ReadM SNP 0044.scaffold00158 547690 1 A G - ReadM SNP 0044.scaffold00158 547841 1 A G - ReadM SNP 0044.scaffold00158 547931 1 G A - ReadM SNP 0044.scaffold00158 548100 1 T A - ReadM SNP 0044.scaffold00158 548529 1 T C - ScafM SNP 0044.scaffold00158 548666 1 C T scaffold2859 ScafM SNP 0044.scaffold00158 548675 2 AC TT scaffold2859 ScafM SNP 0044.scaffold00158 548698 1 G A scaffold2859 ScafM SNP 0044.scaffold00158 548769 2 GC TA scaffold2859 ReadM SNP 0044.scaffold00158 548825 1 A G - ReadM SNP 0044.scaffold00158 548884 1 T C - ReadM SNP 0044.scaffold00158 549272 1 T C - ReadM SNP 0044.scaffold00158 549287 1 C T - ReadM SNP 0044.scaffold00158 549324 1 C G - ReadM SNP 0044.scaffold00158 549404 1 A G - ReadM SNP 0044.scaffold00158 549425 1 T C - ScafM SNP 0044.scaffold00158 551549 1 A T scaffold7837 ScafM SNP 0044.scaffold00158 551633 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 553828 1 A G scaffold2859 ScafM SNP 0044.scaffold00158 553835 1 A G scaffold2859 ScafM SNP 0044.scaffold00158 553838 1 A G scaffold2859 ScafM INDEL 0044.scaffold00158 553857 9 AGGTGACAC ......... scaffold2859 ScafM SNP 0044.scaffold00158 553920 1 C T scaffold2859 ScafM SNP 0044.scaffold00158 554101 1 C G scaffold2859 ScafM SNP 0044.scaffold00158 554104 1 G A scaffold2859 Both SNP 0044.scaffold00158 554220 1 A T scaffold2859 Both SNP 0044.scaffold00158 554233 1 C T scaffold2859 Both SNP 0044.scaffold00158 554266 1 C A scaffold2859 ScafM SNP 0044.scaffold00158 554298 1 A T scaffold2859 Both SNP 0044.scaffold00158 554460 1 T A scaffold2859 Both SNP 0044.scaffold00158 554680 1 T C scaffold2859 Both SNP 0044.scaffold00158 554815 1 G A scaffold2859 Both SNP 0044.scaffold00158 555065 1 T C scaffold2859 ScafM SNP 0044.scaffold00158 555181 1 G T scaffold2859 ScafM SNP 0044.scaffold00158 555183 2 CA TG scaffold2859 ScafM SNP 0044.scaffold00158 555210 1 T C scaffold2859 ScafM SNP 0044.scaffold00158 555217 1 C A scaffold2859 Both SNP 0044.scaffold00158 555324 1 G C scaffold2859 Both SNP 0044.scaffold00158 555406 1 A G scaffold2859 Both SNP 0044.scaffold00158 555412 1 G A scaffold2859 ReadM SNP 0044.scaffold00158 555704 1 G A - ReadM SNP 0044.scaffold00158 555776 1 A T - ReadM SNP 0044.scaffold00158 555942 1 A G - ReadM SNP 0044.scaffold00158 556067 1 A G - ReadM SNP 0044.scaffold00158 556082 1 T A - ReadM SNP 0044.scaffold00158 556223 1 T A - ReadM SNP 0044.scaffold00158 556537 1 A G - ReadM SNP 0044.scaffold00158 556557 1 A G - ReadM INDEL 0044.scaffold00158 556848 3 ... AAC - ReadM SNP 0044.scaffold00158 556949 1 G A - ReadM SNP 0044.scaffold00158 557031 1 G A - ReadM SNP 0044.scaffold00158 557158 1 T A - ReadM SNP 0044.scaffold00158 557467 1 T C - ReadM SNP 0044.scaffold00158 557513 1 A G - ReadM SNP 0044.scaffold00158 557569 1 A C - ReadM SNP 0044.scaffold00158 557774 1 A T - ReadM SNP 0044.scaffold00158 558142 1 C G - ReadM SNP 0044.scaffold00158 558155 1 A G - ReadM SNP 0044.scaffold00158 558278 1 A C - ReadM SNP 0044.scaffold00158 558373 1 C G - ReadM SNP 0044.scaffold00158 558398 1 A T - ReadM SNP 0044.scaffold00158 558493 1 A G - ReadM SNP 0044.scaffold00158 558567 1 G A - ReadM SNP 0044.scaffold00158 558593 1 C T - ReadM SNP 0044.scaffold00158 558599 1 A G - ReadM SNP 0044.scaffold00158 558670 1 C A - ReadM SNP 0044.scaffold00158 558688 1 G A - ReadM SNP 0044.scaffold00158 558811 1 T G - ReadM SNP 0044.scaffold00158 558868 1 G A - ReadM SNP 0044.scaffold00158 559041 1 A T - ReadM SNP 0044.scaffold00158 559300 1 T G - ReadM SNP 0044.scaffold00158 559372 1 G A - ReadM SNP 0044.scaffold00158 559639 1 C T - ReadM SNP 0044.scaffold00158 559712 1 C T - ReadM SNP 0044.scaffold00158 559855 1 C T - ReadM SNP 0044.scaffold00158 560168 1 A C - ReadM SNP 0044.scaffold00158 560438 1 T C - ReadM INDEL 0044.scaffold00158 560445 1 T . - ReadM SNP 0044.scaffold00158 561015 1 T C - ReadM SNP 0044.scaffold00158 561083 1 T C - ReadM SNP 0044.scaffold00158 561092 1 G A - ReadM SNP 0044.scaffold00158 561118 1 T G - ReadM SNP 0044.scaffold00158 561270 1 T C - ReadM SNP 0044.scaffold00158 561293 1 A G - ReadM SNP 0044.scaffold00158 561346 1 C T - ReadM SNP 0044.scaffold00158 561377 1 T C - ReadM SNP 0044.scaffold00158 561449 1 A G - ReadM SNP 0044.scaffold00158 561647 1 A G - ReadM SNP 0044.scaffold00158 561682 1 A T - ReadM SNP 0044.scaffold00158 561711 1 A G - ReadM SNP 0044.scaffold00158 561751 1 C T - ReadM SNP 0044.scaffold00158 561833 1 G T - ReadM SNP 0044.scaffold00158 561910 1 C A - ReadM SNP 0044.scaffold00158 561948 1 A G - ReadM SNP 0044.scaffold00158 562013 1 A G - ReadM SNP 0044.scaffold00158 562226 1 A C - ReadM SNP 0044.scaffold00158 562228 1 C T - ReadM SNP 0044.scaffold00158 562241 1 A T - ReadM SNP 0044.scaffold00158 562393 1 T C - ReadM SNP 0044.scaffold00158 562395 1 G A - ReadM SNP 0044.scaffold00158 562420 1 A G - ReadM SNP 0044.scaffold00158 562443 1 T C - ReadM SNP 0044.scaffold00158 562636 1 G A - ReadM SNP 0044.scaffold00158 562654 1 C T - ReadM SNP 0044.scaffold00158 562666 1 C T - ReadM SNP 0044.scaffold00158 562754 1 T G - ReadM SNP 0044.scaffold00158 562771 1 G A - ReadM SNP 0044.scaffold00158 562818 1 T C - ReadM SNP 0044.scaffold00158 562856 1 A G - ReadM SNP 0044.scaffold00158 563505 1 T C - ScafM SNP 0044.scaffold00158 563856 1 T G scaffold2859 ScafM SNP 0044.scaffold00158 564412 1 G A scaffold2859 ReadM SNP 0044.scaffold00158 564925 1 G A - ScafM SNP 0044.scaffold00158 565536 1 C T scaffold2859 ScafM SNP 0044.scaffold00158 565565 1 A T scaffold2859 ScafM INDEL 0044.scaffold00158 565596 6 AAAATA ...... scaffold2859 ScafM SNP 0044.scaffold00158 565667 1 T A scaffold2859 ScafM SNP 0044.scaffold00158 565755 1 A T scaffold2859 ScafM INDEL 0044.scaffold00158 565767 2 .. TT scaffold2859 ScafM SNP 0044.scaffold00158 565769 1 G T scaffold2859 ScafM SNP 0044.scaffold00158 566175 1 G A scaffold2859 ScafM SNP 0044.scaffold00158 566180 1 C T scaffold2859 ScafM SNP 0044.scaffold00158 566260 1 G A scaffold2859 ScafM INDEL 0044.scaffold00158 566263 1 T . scaffold2859 ScafM SNP 0044.scaffold00158 566370 1 T A scaffold2859 ScafM SNP 0044.scaffold00158 566372 1 G T scaffold2859 ReadM SNP 0044.scaffold00158 568020 1 A G - ReadM SNP 0044.scaffold00158 568291 1 T C - ReadM SNP 0044.scaffold00158 569256 1 A T - ScafM SNP 0044.scaffold00158 569267 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 569278 1 T G scaffold48069 ScafM SNP 0044.scaffold00158 569303 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 569314 1 A G scaffold48069 ScafM INDEL 0044.scaffold00158 569330 20 CGTATTTTATATGATGTTAG .................... scaffold48069 ScafM SNP 0044.scaffold00158 569395 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 569443 1 A C scaffold48069 ScafM SNP 0044.scaffold00158 569446 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 569481 1 A G scaffold48069 Both SNP 0044.scaffold00158 569518 1 C T scaffold48069 ScafM SNP 0044.scaffold00158 569598 1 G T scaffold48069 ScafM SNP 0044.scaffold00158 569612 1 A C scaffold48069 ScafM SNP 0044.scaffold00158 569676 1 T G scaffold48069 ScafM SNP 0044.scaffold00158 569754 1 A G scaffold48069 ScafM SNP 0044.scaffold00158 569781 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 569916 1 C T scaffold48069 ScafM SNP 0044.scaffold00158 569967 1 G A scaffold48069 ScafM SNP 0044.scaffold00158 570015 1 A C scaffold48069 Both SNP 0044.scaffold00158 570066 1 A G scaffold48069 ScafM SNP 0044.scaffold00158 570119 1 G T scaffold48069 ScafM INDEL 0044.scaffold00158 570130 16 ................ AATTTAACCAAAGACA scaffold48069 ScafM SNP 0044.scaffold00158 570191 1 G A scaffold48069 Both SNP 0044.scaffold00158 570198 1 G C scaffold48069 ScafM SNP 0044.scaffold00158 570223 1 G A scaffold48069 ReadM SNP 0044.scaffold00158 570505 1 T A - ScafM SNP 0044.scaffold00158 570670 1 C G scaffold13735 ScafM INDEL 0044.scaffold00158 570698 2 .. TT scaffold13735 ScafM SNP 0044.scaffold00158 570748 1 C A scaffold13735 ScafM SNP 0044.scaffold00158 570763 1 G C scaffold13735 ScafM SNP 0044.scaffold00158 570771 1 C T scaffold13735 ScafM INDEL 0044.scaffold00158 570780 1 . C scaffold13735 ScafM INDEL 0044.scaffold00158 570785 1 G . scaffold13735 Both SNP 0044.scaffold00158 570789 1 A G scaffold13735 ScafM SNP 0044.scaffold00158 570799 2 GT TC scaffold13735 Both SNP 0044.scaffold00158 570820 1 A G scaffold13735 ScafM INDEL 0044.scaffold00158 570833 2 AT .. scaffold13735 ScafM SNP 0044.scaffold00158 570844 1 T C scaffold13735 ScafM SNP 0044.scaffold00158 570848 1 A G scaffold13735 ScafM SNP 0044.scaffold00158 570855 1 C T scaffold13735 ScafM SNP 0044.scaffold00158 570865 1 A C scaffold13735 ReadM SNP 0044.scaffold00158 570943 1 T A - ReadM SNP 0044.scaffold00158 570973 1 A G - ReadM SNP 0044.scaffold00158 571197 1 T C - ScafM SNP 0044.scaffold00158 571276 1 G A scaffold51177 Both INDEL 0044.scaffold00158 571353 3 ... TTT scaffold51177 ScafM SNP 0044.scaffold00158 571382 1 T C scaffold51177 ScafM SNP 0044.scaffold00158 571437 1 G C scaffold51177 ScafM SNP 0044.scaffold00158 571456 1 A C scaffold51177 ScafM INDEL 0044.scaffold00158 571469 10 GGTGATGACA .......... scaffold51177 ScafM SNP 0044.scaffold00158 571532 1 C T scaffold51177 Both SNP 0044.scaffold00158 571563 1 T A scaffold51177 ScafM SNP 0044.scaffold00158 571612 1 G A scaffold51177 ScafM SNP 0044.scaffold00158 571648 1 G A scaffold51177 Both SNP 0044.scaffold00158 571673 1 A C scaffold51177 ScafM SNP 0044.scaffold00158 571711 1 C G scaffold51177 Both SNP 0044.scaffold00158 571717 1 T G scaffold51177 ScafM SNP 0044.scaffold00158 571757 1 G C scaffold51177 ScafM SNP 0044.scaffold00158 571802 1 G C scaffold51177 Both SNP 0044.scaffold00158 571855 1 A C scaffold51177 Both SNP 0044.scaffold00158 571922 1 T C scaffold51177 Both SNP 0044.scaffold00158 571943 1 A T scaffold51177 ScafM INDEL 0044.scaffold00158 571954 6 ...... AGCCAG scaffold51177 ScafM SNP 0044.scaffold00158 571982 1 C T scaffold51177 ScafM SNP 0044.scaffold00158 571991 1 T G scaffold51177 ScafM SNP 0044.scaffold00158 572031 1 G A scaffold51177 ScafM SNP 0044.scaffold00158 572051 1 C T scaffold51177 ScafM SNP 0044.scaffold00158 572072 2 TG CA scaffold51177 ScafM SNP 0044.scaffold00158 572091 1 C G scaffold51177 ScafM SNP 0044.scaffold00158 572096 1 C T scaffold51177 ScafM SNP 0044.scaffold00158 572163 1 G T scaffold51177 Both SNP 0044.scaffold00158 572170 1 G A scaffold51177 ScafM SNP 0044.scaffold00158 572209 1 T C scaffold51177 ScafM SNP 0044.scaffold00158 572261 1 A C scaffold51177 ScafM SNP 0044.scaffold00158 572270 2 TT GC scaffold51177 ScafM SNP 0044.scaffold00158 572302 1 A G scaffold51177 ReadM SNP 0044.scaffold00158 572563 1 A C - ReadM SNP 0044.scaffold00158 572699 1 G A - ReadM SNP 0044.scaffold00158 572782 1 G C - ScafM SNP 0044.scaffold00158 572916 1 T A scaffold48069 ScafM SNP 0044.scaffold00158 572974 1 T C scaffold48069 ScafM SNP 0044.scaffold00158 572984 1 T C scaffold48069 ScafM SNP 0044.scaffold00158 573006 1 T C scaffold48069 ScafM SNP 0044.scaffold00158 573038 1 T A scaffold48069 ScafM SNP 0044.scaffold00158 573069 1 G C scaffold48069 ScafM SNP 0044.scaffold00158 573135 1 G A scaffold48069 ReadM INDEL 0044.scaffold00158 573355 1 A . - ScafM SNP 0044.scaffold00158 573760 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 573828 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 573886 1 G T scaffold7837 ScafM SNP 0044.scaffold00158 573958 1 G C scaffold7837 ScafM SNP 0044.scaffold00158 573987 1 A T scaffold7837 ScafM SNP 0044.scaffold00158 574025 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 574060 1 A G scaffold7837 ScafM SNP 0044.scaffold00158 574070 1 G A scaffold7837 ScafM SNP 0044.scaffold00158 574080 1 G T scaffold7837 ScafM SNP 0044.scaffold00158 574117 1 G A scaffold7837 ScafM SNP 0044.scaffold00158 574132 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 574149 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 574176 1 A G scaffold7837 ScafM SNP 0044.scaffold00158 574213 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 574224 1 C A scaffold7837 ScafM INDEL 0044.scaffold00158 574225 4 .... AAAA scaffold7837 ScafM SNP 0044.scaffold00158 574228 1 T A scaffold7837 ScafM SNP 0044.scaffold00158 574283 1 G C scaffold7837 ScafM SNP 0044.scaffold00158 574302 1 A G scaffold7837 ScafM SNP 0044.scaffold00158 574324 1 T G scaffold7837 ReadM SNP 0044.scaffold00158 574335 1 C A - ScafM SNP 0044.scaffold00158 574365 1 T C scaffold7837 ScafM SNP 0044.scaffold00158 574383 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 574396 1 A G scaffold7837 ScafM SNP 0044.scaffold00158 574451 1 G A scaffold7837 ScafM SNP 0044.scaffold00158 574502 1 T G scaffold7837 Both SNP 0044.scaffold00158 574560 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 574640 1 A T scaffold7837 Both SNP 0044.scaffold00158 574663 1 T A scaffold7837 ScafM SNP 0044.scaffold00158 574699 1 G A scaffold7837 ScafM SNP 0044.scaffold00158 574735 1 G C scaffold7837 ScafM SNP 0044.scaffold00158 574760 1 C G scaffold7837 Both SNP 0044.scaffold00158 574867 1 A T scaffold7837 ScafM SNP 0044.scaffold00158 574878 1 A G scaffold7837 ScafM INDEL 0044.scaffold00158 574898 1 . G scaffold7837 ScafM SNP 0044.scaffold00158 574901 1 G T scaffold7837 ScafM SNP 0044.scaffold00158 574913 1 G A scaffold7837 ScafM SNP 0044.scaffold00158 574969 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 574992 1 C T scaffold7837 ScafM SNP 0044.scaffold00158 575007 1 C T scaffold7837 ReadM SNP 0044.scaffold00158 575139 1 A C - ReadM SNP 0044.scaffold00158 577386 1 C G - ReadM SNP 0044.scaffold00158 578297 1 C T - ReadM SNP 0044.scaffold00158 578666 1 T C - ReadM SNP 0044.scaffold00158 579103 1 G C - ReadM SNP 0044.scaffold00158 581367 1 C T - ReadM SNP 0044.scaffold00158 581769 1 C T - ReadM SNP 0044.scaffold00158 582088 1 T G - ReadM SNP 0044.scaffold00158 582311 1 T A - ReadM SNP 0044.scaffold00158 582447 1 T A - ReadM SNP 0044.scaffold00158 582630 1 T C - ReadM SNP 0044.scaffold00158 587636 1 A G - ReadM SNP 0044.scaffold00158 587709 1 T C - ReadM SNP 0044.scaffold00158 587942 1 T C - ReadM SNP 0044.scaffold00158 588068 1 T C - ReadM SNP 0044.scaffold00158 588799 1 A G - ReadM SNP 0044.scaffold00158 588910 1 A G - ReadM SNP 0044.scaffold00158 588939 1 T C - ReadM SNP 0044.scaffold00158 589036 1 G C - ReadM SNP 0044.scaffold00158 589671 1 A T - ReadM SNP 0044.scaffold00158 589870 1 G T - ReadM SNP 0044.scaffold00158 590301 1 A C - ReadM SNP 0044.scaffold00158 590307 1 T C - ReadM SNP 0044.scaffold00158 590503 1 A G - ReadM SNP 0044.scaffold00158 590652 1 T C - ReadM SNP 0044.scaffold00158 590901 1 G A - ReadM SNP 0044.scaffold00158 591548 1 C A - ReadM SNP 0044.scaffold00158 591953 1 T C - ReadM SNP 0044.scaffold00158 592099 1 T A - ReadM SNP 0044.scaffold00158 592280 1 A G - ReadM SNP 0044.scaffold00158 592670 1 G C - ReadM SNP 0044.scaffold00158 592943 1 A G - ReadM SNP 0044.scaffold00158 593064 1 G A - ReadM SNP 0044.scaffold00158 593195 1 T C - ReadM SNP 0044.scaffold00158 593399 1 G A - ReadM SNP 0044.scaffold00158 593440 1 C G - ReadM SNP 0044.scaffold00158 594130 1 A C - ReadM SNP 0044.scaffold00158 594261 1 T C - ScafM SNP 0044.scaffold00158 595161 1 A G scaffold11336 ScafM SNP 0044.scaffold00158 595218 1 A T scaffold11336 ScafM INDEL 0044.scaffold00158 595318 1 A . scaffold11336 ScafM SNP 0044.scaffold00158 595430 1 T C scaffold11336 ScafM SNP 0044.scaffold00158 595680 1 C T scaffold11336 ScafM SNP 0044.scaffold00158 595690 1 T C scaffold11336 ScafM SNP 0044.scaffold00158 596101 1 A C scaffold11336 ScafM SNP 0044.scaffold00158 596111 1 A G scaffold11336 ScafM SNP 0044.scaffold00158 596191 1 C A scaffold11336 ScafM SNP 0044.scaffold00158 596240 1 A G scaffold11336 ScafM SNP 0044.scaffold00158 596279 1 G A scaffold11336 ScafM SNP 0044.scaffold00158 596292 1 A T scaffold11336 ReadM SNP 0044.scaffold00158 596549 1 T C - ScafM SNP 0044.scaffold00158 596549 2 TT CC scaffold11336 ScafM SNP 0044.scaffold00158 596553 1 T C scaffold11336 Both SNP 0044.scaffold00158 596566 1 C T scaffold11336 ScafM INDEL 0044.scaffold00158 596613 7 TAACTAT ....... scaffold11336 ScafM SNP 0044.scaffold00158 596647 1 C T scaffold11336 ScafM SNP 0044.scaffold00158 596653 1 C A scaffold11336 ScafM INDEL 0044.scaffold00158 596656 2 CT .. scaffold11336 ScafM SNP 0044.scaffold00158 596698 1 A G scaffold11336 ScafM SNP 0044.scaffold00158 596703 1 T C scaffold11336 Both SNP 0044.scaffold00158 596770 1 A G scaffold11336 ScafM INDEL 0044.scaffold00158 596803 1 T . scaffold11336 ScafM SNP 0044.scaffold00158 596810 1 C T scaffold11336 ScafM SNP 0044.scaffold00158 596840 1 G C scaffold11336 ScafM SNP 0044.scaffold00158 596856 1 A C scaffold11336 ScafM SNP 0044.scaffold00158 596878 1 C T scaffold11336 Both SNP 0044.scaffold00158 596905 1 T C scaffold11336 Both SNP 0044.scaffold00158 596917 1 C T scaffold11336 ReadM SNP 0044.scaffold00158 597085 1 G C - ReadM SNP 0044.scaffold00158 597298 1 G A - ReadM SNP 0044.scaffold00158 597832 1 A G - ReadM SNP 0044.scaffold00158 597857 1 A G - ReadM SNP 0044.scaffold00158 598093 1 T C - ReadM SNP 0044.scaffold00158 603390 1 T C - ReadM SNP 0044.scaffold00158 603589 1 A T - ReadM SNP 0044.scaffold00158 604509 1 T C - ScafM SNP 0044.scaffold00158 605041 1 A T scaffold14830 Both INDEL 0044.scaffold00158 606654 1 T . scaffold14830 Both SNP 0044.scaffold00158 606899 1 C T scaffold14830 Both SNP 0044.scaffold00158 606946 1 G A scaffold14830 ReadM SNP 0044.scaffold00158 607662 1 A C - ScafM SNP 0044.scaffold00158 608627 1 G T scaffold14830 ScafM SNP 0044.scaffold00158 609143 1 T C scaffold14830 Both SNP 0044.scaffold00158 609556 1 T A scaffold14830 ScafM SNP 0044.scaffold00158 609593 1 T G scaffold14830 ScafM SNP 0044.scaffold00158 609683 1 G A scaffold14830 ScafM INDEL 0044.scaffold00158 609687 4 .... ATAT scaffold14830 ScafM SNP 0044.scaffold00158 609736 1 A T scaffold14830 Both INDEL 0044.scaffold00158 610111 1 . C scaffold14830 ScafM SNP 0044.scaffold00158 610365 1 C T scaffold14830 ScafM SNP 0044.scaffold00158 610655 1 C T scaffold14830 Both SNP 0044.scaffold00158 611454 1 G C scaffold14830 ScafM SNP 0044.scaffold00158 611784 1 G T scaffold14830 ScafM SNP 0044.scaffold00158 612050 1 C A scaffold14830 Both SNP 0044.scaffold00158 612311 1 T C scaffold14830 Both SNP 0044.scaffold00158 612487 1 A C scaffold14830 ScafM INDEL 0044.scaffold00158 612768 1 . A scaffold14830 Both SNP 0044.scaffold00158 613129 1 A G scaffold14830 ScafM SNP 0044.scaffold00158 613173 1 A C scaffold14830 ScafM INDEL 0044.scaffold00158 613196 4 .... TTTA scaffold14830 ScafM SNP 0044.scaffold00158 613247 1 A T scaffold14830 ReadM SNP 0044.scaffold00158 613527 1 T C - ReadM SNP 0044.scaffold00158 613813 1 C A - ReadM SNP 0044.scaffold00158 613926 1 T C - ReadM SNP 0044.scaffold00158 617664 1 G A - ReadM SNP 0044.scaffold00158 618380 1 G A - ReadM INDEL 0044.scaffold00158 618423 1 A . - ReadM SNP 0044.scaffold00158 619927 1 T A - ReadM SNP 0044.scaffold00158 620400 1 A G - ReadM SNP 0044.scaffold00158 621037 1 T C - ReadM SNP 0044.scaffold00158 622399 1 T G - ReadM SNP 0044.scaffold00158 626001 1 G T - ReadM SNP 0044.scaffold00158 626687 1 A G - ReadM SNP 0044.scaffold00158 626940 1 G A - ReadM SNP 0044.scaffold00158 627532 1 T C - ScafM INDEL 0044.scaffold00158 628248 1 . G scaffold14137 ScafM SNP 0044.scaffold00158 628303 1 G T scaffold14137 ScafM SNP 0044.scaffold00158 628345 1 A G scaffold14137 ScafM SNP 0044.scaffold00158 628365 1 T G scaffold14137 ScafM SNP 0044.scaffold00158 628369 2 GG CA scaffold14137 ScafM SNP 0044.scaffold00158 628388 1 T C scaffold14137 ScafM SNP 0044.scaffold00158 628393 1 C T scaffold14137 ScafM SNP 0044.scaffold00158 628413 1 C A scaffold14137 ScafM SNP 0044.scaffold00158 628422 1 G A scaffold14137 ScafM SNP 0044.scaffold00158 628466 1 C T scaffold14137 ScafM SNP 0044.scaffold00158 628480 1 C A scaffold14137 Both SNP 0044.scaffold00158 628493 1 A G scaffold14137 ScafM SNP 0044.scaffold00158 628505 1 G C scaffold14137 ScafM SNP 0044.scaffold00158 628550 1 A G scaffold14137 ScafM SNP 0044.scaffold00158 628552 1 G A scaffold14137 ScafM SNP 0044.scaffold00158 628587 1 A T scaffold14137 ScafM SNP 0044.scaffold00158 628597 2 GT AC scaffold14137 Both SNP 0044.scaffold00158 630207 1 T C scaffold60370 ReadM SNP 0044.scaffold00158 630719 1 A G - ReadM SNP 0044.scaffold00158 631780 1 A T - ReadM SNP 0044.scaffold00158 631911 1 T C - ReadM SNP 0044.scaffold00158 631931 1 A G - ReadM SNP 0044.scaffold00158 632023 1 G A - ReadM SNP 0044.scaffold00158 632069 1 A G - ReadM SNP 0044.scaffold00158 632233 1 A G - ReadM INDEL 0044.scaffold00158 632349 1 . A - ReadM SNP 0044.scaffold00158 632642 1 G A - ReadM SNP 0044.scaffold00158 633116 1 T G - ReadM SNP 0044.scaffold00158 633939 1 C G - ScafM SNP 0044.scaffold00158 634061 1 G C scaffold1409 ScafM INDEL 0044.scaffold00158 634065 2 TT .C scaffold1409 ScafM SNP 0044.scaffold00158 634071 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634076 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634082 3 GTG AGA scaffold1409 ScafM SNP 0044.scaffold00158 634089 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634101 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634135 3 TCG CTA scaffold1409 ScafM SNP 0044.scaffold00158 634153 2 CG TA scaffold1409 ScafM SNP 0044.scaffold00158 634160 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634184 1 C A scaffold1409 ScafM SNP 0044.scaffold00158 634186 1 C T scaffold1409 ReadM SNP 0044.scaffold00158 634194 1 T C - ScafM SNP 0044.scaffold00158 634208 1 T G scaffold1409 ScafM SNP 0044.scaffold00158 634210 1 G C scaffold1409 ScafM SNP 0044.scaffold00158 634217 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634220 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634228 1 T G scaffold1409 ScafM SNP 0044.scaffold00158 634232 2 CA TG scaffold1409 ScafM SNP 0044.scaffold00158 634236 2 CT AC scaffold1409 ScafM SNP 0044.scaffold00158 634239 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634249 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634256 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634261 1 T G scaffold1409 ScafM SNP 0044.scaffold00158 634294 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634299 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634309 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634326 1 C A scaffold1409 ScafM SNP 0044.scaffold00158 634328 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634331 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634337 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634352 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634358 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634371 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634373 2 TG AC scaffold1409 ScafM SNP 0044.scaffold00158 634402 1 G A scaffold1409 ScafM SNP 0044.scaffold00158 634415 2 CG AA scaffold1409 ReadM SNP 0044.scaffold00158 634424 1 T A - ScafM SNP 0044.scaffold00158 634424 2 TT AG scaffold1409 ScafM SNP 0044.scaffold00158 634433 1 G C scaffold1409 ScafM SNP 0044.scaffold00158 634436 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634441 1 T G scaffold1409 ScafM SNP 0044.scaffold00158 634459 1 C G scaffold1409 ScafM SNP 0044.scaffold00158 634464 1 T A scaffold1409 ScafM SNP 0044.scaffold00158 634468 3 ACT GGC scaffold1409 ScafM SNP 0044.scaffold00158 634479 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634496 1 A T scaffold1409 ScafM SNP 0044.scaffold00158 634500 1 A C scaffold1409 ScafM SNP 0044.scaffold00158 634505 2 TC CT scaffold1409 ScafM SNP 0044.scaffold00158 634509 1 A T scaffold1409 ScafM SNP 0044.scaffold00158 634512 1 T C scaffold1409 ScafM SNP 0044.scaffold00158 634531 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634535 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634547 1 G T scaffold1409 ScafM SNP 0044.scaffold00158 634573 1 A T scaffold1409 ScafM INDEL 0044.scaffold00158 634574 1 . A scaffold1409 ScafM SNP 0044.scaffold00158 634577 2 TT AC scaffold1409 ScafM SNP 0044.scaffold00158 634589 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634596 1 G A scaffold1409 ScafM INDEL 0044.scaffold00158 634613 3 ... AAG scaffold1409 ScafM SNP 0044.scaffold00158 634615 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634622 1 A G scaffold1409 ScafM SNP 0044.scaffold00158 634631 1 T G scaffold1409 ScafM SNP 0044.scaffold00158 634634 1 C A scaffold1409 ScafM SNP 0044.scaffold00158 634649 1 C T scaffold1409 ScafM SNP 0044.scaffold00158 634652 1 A T scaffold1409 ScafM SNP 0044.scaffold00158 634655 1 T G scaffold1409 ReadM SNP 0044.scaffold00158 635739 1 A C - ReadM SNP 0044.scaffold00158 636011 1 A G - ReadM SNP 0044.scaffold00158 638552 1 T A - ReadM SNP 0044.scaffold00158 639236 1 C A - ReadM INDEL 0044.scaffold00158 640781 1 T . - ReadM SNP 0044.scaffold00158 641651 1 T C - ReadM SNP 0044.scaffold00158 641782 1 G T - ReadM SNP 0044.scaffold00158 641887 1 T G - ReadM SNP 0044.scaffold00158 642344 1 G A - ReadM SNP 0044.scaffold00158 642864 1 C T - ReadM SNP 0044.scaffold00158 642990 1 G T - ReadM SNP 0044.scaffold00158 643105 1 T C - ReadM INDEL 0044.scaffold00158 643695 1 . T - ReadM SNP 0044.scaffold00158 644150 1 T C - ReadM SNP 0044.scaffold00158 644404 1 A G - ScafM SNP 0044.scaffold00158 644796 1 T C scaffold1298 ScafM SNP 0044.scaffold00158 644845 1 T C scaffold1298 ScafM SNP 0044.scaffold00158 644858 1 A G scaffold1298 ScafM SNP 0044.scaffold00158 644905 1 T G scaffold1298 ScafM SNP 0044.scaffold00158 644913 1 T A scaffold1298 ScafM SNP 0044.scaffold00158 644915 1 T C scaffold1298 ScafM SNP 0044.scaffold00158 644933 1 C G scaffold1298 ScafM SNP 0044.scaffold00158 644970 1 A G scaffold1298 ScafM SNP 0044.scaffold00158 644994 1 A G scaffold1298 ScafM SNP 0044.scaffold00158 645039 1 T C scaffold1298 ScafM SNP 0044.scaffold00158 645060 1 C T scaffold1298 ScafM SNP 0044.scaffold00158 645065 1 A T scaffold1298 ScafM SNP 0044.scaffold00158 645083 1 T A scaffold1298 ScafM SNP 0044.scaffold00158 645087 1 T A scaffold1298 ScafM SNP 0044.scaffold00158 645101 1 A G scaffold1298 ScafM SNP 0044.scaffold00158 645159 1 T G scaffold1298 ScafM SNP 0044.scaffold00158 645170 1 C A scaffold1298 ReadM SNP 0044.scaffold00158 645435 1 A G - ReadM SNP 0044.scaffold00158 645515 1 G A - ReadM INDEL 0044.scaffold00158 645632 1 . T - ReadM SNP 0044.scaffold00158 645712 1 T C - ReadM SNP 0044.scaffold00158 646156 1 T C - ReadM INDEL 0044.scaffold00158 646922 1 . G - ReadM SNP 0044.scaffold00158 647096 1 A G - ReadM INDEL 0044.scaffold00158 647733 1 C . - ReadM SNP 0044.scaffold00158 647966 1 T G - ReadM SNP 0044.scaffold00158 647987 1 C T - ReadM SNP 0044.scaffold00158 647993 1 T C - ReadM SNP 0044.scaffold00158 651251 1 C T - ScafM SNP 0044.scaffold00158 652086 1 A G C19706733 ReadM SNP 0044.scaffold00158 653537 1 A G - ReadM SNP 0044.scaffold00158 653829 1 C A - ReadM SNP 0044.scaffold00158 654903 1 C T - ReadM INDEL 0044.scaffold00158 655436 1 . A - ReadM INDEL 0044.scaffold00158 655521 2 AA .. - ReadM SNP 0044.scaffold00158 656479 1 G A - Both INDEL 0044.scaffold00158 659610 1 G . scaffold25085 ScafM SNP 0044.scaffold00158 659889 1 T G scaffold25085 ScafM SNP 0044.scaffold00158 661536 1 A G scaffold10721 ScafM SNP 0044.scaffold00158 662076 1 G A scaffold10721 ScafM SNP 0044.scaffold00158 662422 1 T G scaffold10721 Both SNP 0044.scaffold00158 662951 1 C T scaffold10721 ReadM SNP 0044.scaffold00158 663223 1 A G - Both INDEL 0044.scaffold00158 663293 1 T . scaffold10721 ReadM SNP 0044.scaffold00158 663506 1 T C - ReadM INDEL 0044.scaffold00158 663702 3 AAC ... - Both SNP 0044.scaffold00158 664317 1 T C scaffold10721 Both SNP 0044.scaffold00158 666251 1 G A scaffold10721 Both SNP 0044.scaffold00158 667012 1 T C scaffold10721 ReadM SNP 0044.scaffold00158 667088 1 T A - ReadM SNP 0044.scaffold00158 667207 1 T C - Both SNP 0044.scaffold00158 667306 1 T C scaffold10721 Both SNP 0044.scaffold00158 667382 1 G A scaffold10721 ReadM INDEL 0044.scaffold00158 667583 1 A . - ReadM SNP 0044.scaffold00158 667652 1 T C - ReadM SNP 0044.scaffold00158 668919 1 A T - ScafM SNP 0044.scaffold00158 669543 1 C A scaffold28338 ScafM SNP 0044.scaffold00158 669618 1 A T scaffold28338 ScafM SNP 0044.scaffold00158 669737 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 669744 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 669832 1 T G scaffold28338 ScafM SNP 0044.scaffold00158 669842 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 669848 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 669916 1 G T scaffold28338 ScafM SNP 0044.scaffold00158 669938 1 A T scaffold28338 ScafM SNP 0044.scaffold00158 670019 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 670043 1 A G scaffold28338 ScafM INDEL 0044.scaffold00158 670164 3 ... CTT scaffold28338 ScafM SNP 0044.scaffold00158 670169 1 C A scaffold28338 ScafM INDEL 0044.scaffold00158 670182 9 ......... CGTCGTTCG scaffold28338 ScafM SNP 0044.scaffold00158 670343 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 670373 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 670396 1 C G scaffold28338 ScafM SNP 0044.scaffold00158 670411 1 G C scaffold28338 ScafM SNP 0044.scaffold00158 670492 2 TC CA scaffold28338 ScafM SNP 0044.scaffold00158 670523 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 670561 1 G A scaffold28338 ScafM INDEL 0044.scaffold00158 670608 15 AAAGAGAAGAGAGAA ............... scaffold28338 ScafM SNP 0044.scaffold00158 670643 1 T A scaffold28338 ScafM SNP 0044.scaffold00158 670694 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 670713 1 A G scaffold28338 ScafM INDEL 0044.scaffold00158 670736 11 ........... GGGAGAAAATG scaffold28338 ScafM SNP 0044.scaffold00158 670772 1 C T scaffold28338 ScafM INDEL 0044.scaffold00158 670777 5 ..... TTTTT scaffold28338 ScafM SNP 0044.scaffold00158 670779 1 A T scaffold28338 ScafM SNP 0044.scaffold00158 670800 1 G A scaffold28338 ScafM INDEL 0044.scaffold00158 670814 1 T . scaffold28338 ScafM SNP 0044.scaffold00158 670847 1 G C scaffold28338 ScafM SNP 0044.scaffold00158 670853 1 G A scaffold28338 ScafM INDEL 0044.scaffold00158 670861 3 ... TTT scaffold28338 ScafM SNP 0044.scaffold00158 670866 1 A T scaffold28338 ScafM INDEL 0044.scaffold00158 670926 1 T . scaffold28338 ScafM SNP 0044.scaffold00158 670937 1 C A scaffold28338 ScafM SNP 0044.scaffold00158 670941 1 T A scaffold28338 ScafM SNP 0044.scaffold00158 670951 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 670976 1 G C scaffold28338 ScafM INDEL 0044.scaffold00158 670989 1 . C scaffold28338 ScafM SNP 0044.scaffold00158 671020 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 671031 1 G T scaffold28338 ScafM SNP 0044.scaffold00158 671039 1 C A scaffold28338 Both INDEL 0044.scaffold00158 675274 1 . T scaffold10721 ScafM SNP 0044.scaffold00158 675460 1 C T scaffold10721 ScafM INDEL 0044.scaffold00158 675818 1 T . scaffold10721 ScafM SNP 0044.scaffold00158 675864 1 A G scaffold10721 ScafM SNP 0044.scaffold00158 675968 1 C T scaffold10721 ScafM SNP 0044.scaffold00158 675994 1 T A scaffold10721 ScafM SNP 0044.scaffold00158 677789 1 C T scaffold484 Both SNP 0044.scaffold00158 678018 1 A G scaffold10721 ScafM SNP 0044.scaffold00158 678393 1 C A scaffold10721 ReadM SNP 0044.scaffold00158 679051 1 C T - ScafM SNP 0044.scaffold00158 679759 1 G A scaffold10721 Both SNP 0044.scaffold00158 679871 1 T C scaffold10721 ScafM SNP 0044.scaffold00158 679885 1 T C scaffold10721 Both SNP 0044.scaffold00158 679956 1 A C scaffold10721 ScafM INDEL 0044.scaffold00158 680160 1 A . scaffold10721 ScafM INDEL 0044.scaffold00158 680187 11 GATATTGAAAT ........... scaffold10721 ReadM SNP 0044.scaffold00158 680333 1 T C - ScafM INDEL 0044.scaffold00158 680910 1 . T scaffold10721 ScafM INDEL 0044.scaffold00158 680946 1 T . scaffold10721 ScafM SNP 0044.scaffold00158 681076 1 T C scaffold10721 ScafM SNP 0044.scaffold00158 681364 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681376 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 681398 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 681400 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 681453 1 C A scaffold28338 ScafM INDEL 0044.scaffold00158 681463 1 T . scaffold28338 ScafM SNP 0044.scaffold00158 681509 1 T G scaffold28338 ScafM SNP 0044.scaffold00158 681535 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 681550 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 681567 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 681576 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681584 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681593 1 T A scaffold28338 ScafM SNP 0044.scaffold00158 681604 1 T C scaffold28338 ReadM SNP 0044.scaffold00158 681614 1 C T - ScafM SNP 0044.scaffold00158 681634 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 681636 1 C G scaffold28338 ScafM SNP 0044.scaffold00158 681646 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681661 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 681668 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 681681 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 681755 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681765 1 C A scaffold28338 ScafM SNP 0044.scaffold00158 681786 1 T A scaffold28338 ScafM SNP 0044.scaffold00158 681797 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 681807 1 G A scaffold28338 Both SNP 0044.scaffold00158 681811 1 T C scaffold28338 ScafM SNP 0044.scaffold00158 681813 1 C T scaffold28338 ScafM SNP 0044.scaffold00158 682032 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 682050 1 T G scaffold28338 ScafM SNP 0044.scaffold00158 682060 1 A G scaffold28338 ScafM SNP 0044.scaffold00158 682064 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 682083 1 A C scaffold28338 ScafM SNP 0044.scaffold00158 682089 1 G A scaffold28338 ScafM SNP 0044.scaffold00158 682092 1 A T scaffold28338 ScafM INDEL 0044.scaffold00158 682138 1 . A scaffold28338 Both SNP 0044.scaffold00158 682190 1 T A scaffold28338 ReadM SNP 0044.scaffold00158 682750 1 T G - ReadM SNP 0044.scaffold00158 687713 1 A G - ReadM SNP 0044.scaffold00158 688091 1 A G - ReadM SNP 0044.scaffold00158 688411 1 A G - ReadM SNP 0044.scaffold00158 688457 1 G A - ReadM SNP 0044.scaffold00158 688908 1 A G - ReadM SNP 0044.scaffold00158 689168 1 C T - ReadM SNP 0044.scaffold00158 689186 1 G A - ReadM SNP 0044.scaffold00158 689667 1 A G - ScafM SNP 0044.scaffold00158 698363 1 G T scaffold19196 ScafM SNP 0044.scaffold00158 698367 1 C T scaffold19196 ScafM SNP 0044.scaffold00158 698376 1 A T scaffold19196 ReadM SNP 0044.scaffold00158 698382 1 G T - ReadM SNP 0044.scaffold00158 703417 1 A G - ScafM SNP 0044.scaffold00158 707788 1 C A scaffold16558 ScafM SNP 0044.scaffold00158 707791 1 C A scaffold16558 ScafM INDEL 0044.scaffold00158 707793 4 ...G AAAT scaffold16558 ScafM INDEL 0044.scaffold00158 707806 1 A . scaffold16558 ScafM INDEL 0044.scaffold00158 707821 1 T . scaffold16558 ReadM SNP 0044.scaffold00158 709310 1 T C - Both SNP 0044.scaffold00158 709693 1 G A scaffold783 Both SNP 0044.scaffold00158 709696 1 G A scaffold783 Both SNP 0044.scaffold00158 709753 1 A C scaffold783 Both SNP 0044.scaffold00158 709977 1 T C scaffold783 Both SNP 0044.scaffold00158 710398 1 T C scaffold783 Both SNP 0044.scaffold00158 711483 1 G T scaffold783 Both SNP 0044.scaffold00158 711560 1 G T scaffold783 ScafM INDEL 0044.scaffold00158 712275 1 . A scaffold783 Both SNP 0044.scaffold00158 712413 1 C T scaffold783 Both SNP 0044.scaffold00158 712493 1 T C scaffold783 ReadM SNP 0044.scaffold00158 712548 1 G A - ReadM SNP 0044.scaffold00158 712558 1 G C - ReadM SNP 0044.scaffold00158 712606 1 A T - Both SNP 0044.scaffold00158 713710 1 G A scaffold783 ReadM INDEL 0044.scaffold00158 714211 1 A . - ReadM SNP 0044.scaffold00158 714806 1 A C - ReadM SNP 0044.scaffold00158 714892 1 C T - Both SNP 0044.scaffold00158 714976 1 T C scaffold783 ReadM SNP 0044.scaffold00158 715194 1 C T - ReadM SNP 0044.scaffold00158 715253 1 C T - Both SNP 0044.scaffold00158 715641 1 C A scaffold783 Both SNP 0044.scaffold00158 715800 1 G T scaffold783 Both SNP 0044.scaffold00158 716196 1 T A scaffold783 Both SNP 0044.scaffold00158 716322 1 C T scaffold783 Both SNP 0044.scaffold00158 716499 1 C G scaffold783 ReadM SNP 0044.scaffold00158 716887 1 G A - Both SNP 0044.scaffold00158 717222 1 T A scaffold783 ReadM INDEL 0044.scaffold00158 717684 1 . G - ReadM SNP 0044.scaffold00158 717899 1 A G - ScafM SNP 0044.scaffold00158 719331 1 C G scaffold783 Both SNP 0044.scaffold00158 719729 1 T C scaffold783 ReadM SNP 0044.scaffold00158 720714 1 G C - Both SNP 0044.scaffold00158 720745 1 A G scaffold783 Both SNP 0044.scaffold00158 721199 1 G A scaffold783 ScafM SNP 0044.scaffold00158 721519 1 T C scaffold16558 ScafM SNP 0044.scaffold00158 721574 1 T A scaffold16558 ScafM SNP 0044.scaffold00158 721577 2 AG TA scaffold16558 ScafM SNP 0044.scaffold00158 721580 1 G A scaffold16558 ScafM SNP 0044.scaffold00158 721635 1 G T scaffold16558 ReadM SNP 0044.scaffold00158 722101 1 T C - ReadM SNP 0044.scaffold00158 722202 1 T A - ReadM SNP 0044.scaffold00158 722465 1 A G - ScafM SNP 0044.scaffold00158 722840 1 A G scaffold783 ReadM SNP 0044.scaffold00158 728120 1 C G - Both SNP 0044.scaffold00158 729080 1 A C scaffold783 ReadM SNP 0044.scaffold00158 729490 1 A G - ScafM INDEL 0044.scaffold00158 730211 2 .. GT scaffold783 Both SNP 0044.scaffold00158 730490 1 A C scaffold783 ReadM SNP 0044.scaffold00158 730864 1 C G - ReadM SNP 0044.scaffold00158 730913 1 A G - ScafM INDEL 0044.scaffold00158 730951 12 ............ AAACCCAAACCA scaffold783 Both SNP 0044.scaffold00158 731009 1 C T scaffold783 Both SNP 0044.scaffold00158 731204 1 T A scaffold783 ScafM SNP 0044.scaffold00158 731219 1 G T scaffold783 ScafM SNP 0044.scaffold00158 732782 1 T A scaffold783 ScafM SNP 0044.scaffold00158 733190 1 A G scaffold783 Both SNP 0044.scaffold00158 733485 1 C A scaffold783 ScafM SNP 0044.scaffold00158 733610 1 G A scaffold783 ReadM SNP 0044.scaffold00158 734451 1 C G - ReadM SNP 0044.scaffold00158 735088 1 A G - Both SNP 0044.scaffold00158 735488 1 A G scaffold783 ReadM SNP 0044.scaffold00158 735793 1 A G - ReadM SNP 0044.scaffold00158 736326 1 G A - ReadM SNP 0044.scaffold00158 736580 1 T C - ReadM SNP 0044.scaffold00158 736886 1 T C - ScafM SNP 0044.scaffold00158 737099 2 GA AG scaffold783 ReadM SNP 0044.scaffold00158 737623 1 C A - Both SNP 0044.scaffold00158 737773 1 T C scaffold783 Both SNP 0044.scaffold00158 738182 1 T C scaffold783 Both SNP 0044.scaffold00158 738248 1 G T scaffold783 Both SNP 0044.scaffold00158 738292 1 A G scaffold783 ReadM SNP 0044.scaffold00158 738431 1 G C - ReadM SNP 0044.scaffold00158 738770 1 G A - Both SNP 0044.scaffold00158 739335 1 T G scaffold783 ReadM SNP 0044.scaffold00158 739370 2 TT CG - ReadM SNP 0044.scaffold00158 739484 1 T C - ReadM SNP 0044.scaffold00158 739649 1 G C - ReadM SNP 0044.scaffold00158 740292 1 A G - ScafM INDEL 0044.scaffold00158 740527 3 TTT ... scaffold783 Both SNP 0044.scaffold00158 740547 1 C T scaffold783 Both SNP 0044.scaffold00158 740555 1 T A scaffold783 Both SNP 0044.scaffold00158 740587 1 A G scaffold783 Both SNP 0044.scaffold00158 740895 1 A G scaffold783 ReadM INDEL 0044.scaffold00158 742868 3 ... AAC - ReadM SNP 0044.scaffold00158 742915 1 T C - Both SNP 0044.scaffold00158 743366 1 T C scaffold783 Both SNP 0044.scaffold00158 743481 1 G T scaffold783 ScafM SNP 0044.scaffold00158 744607 2 AA GG scaffold783 ReadM SNP 0044.scaffold00158 746462 1 A G - Both SNP 0044.scaffold00158 746723 1 A T scaffold783 ScafM SNP 0044.scaffold00158 746823 1 A C scaffold783 Both SNP 0044.scaffold00158 747427 1 C T scaffold783 ScafM SNP 0044.scaffold00158 747509 1 C T scaffold783 ReadM SNP 0044.scaffold00158 747734 1 C G - ReadM SNP 0044.scaffold00158 748320 1 A T - ScafM SNP 0044.scaffold00158 749264 1 G C C19676655 ScafM SNP 0044.scaffold00158 749294 1 T G C19676655 ReadM SNP 0044.scaffold00158 750284 1 T G - ReadM SNP 0044.scaffold00158 750304 1 A G - ReadM SNP 0044.scaffold00158 751352 1 T C - ReadM SNP 0044.scaffold00158 751959 1 A G - Both SNP 0044.scaffold00158 753377 1 T C C19693619 Both SNP 0044.scaffold00158 753532 1 C A C19693619 ScafM SNP 0044.scaffold00158 753650 1 A T C19693619 ReadM SNP 0044.scaffold00158 755386 1 G C - ScafM SNP 0044.scaffold00158 755678 1 C T scaffold55282 Both SNP 0044.scaffold00158 755767 1 C G scaffold55282 Both SNP 0044.scaffold00158 755819 1 T C scaffold55282 Both INDEL 0044.scaffold00158 756034 1 . C scaffold55282 ScafM SNP 0044.scaffold00158 756043 1 T C scaffold55282 Both SNP 0044.scaffold00158 756121 1 T C scaffold55282 ScafM SNP 0044.scaffold00158 756426 1 C T scaffold55282 Both SNP 0044.scaffold00158 756446 1 T G scaffold55282 ScafM SNP 0044.scaffold00158 756663 1 A C scaffold55282 ReadM INDEL 0044.scaffold00158 757035 3 ... TGT - ReadM SNP 0044.scaffold00158 757400 1 T G - ReadM SNP 0044.scaffold00158 757809 1 A G - ReadM SNP 0044.scaffold00158 758101 1 G C - ReadM SNP 0044.scaffold00158 759240 1 A C - ReadM SNP 0044.scaffold00158 759806 1 A G - ReadM SNP 0044.scaffold00158 759843 1 A T - ReadM SNP 0044.scaffold00158 759907 1 C T - ReadM SNP 0044.scaffold00158 759912 1 G A - Both INDEL 0044.scaffold00158 760010 1 A . scaffold40703 Both SNP 0044.scaffold00158 760412 1 C A scaffold40703 ScafM INDEL 0044.scaffold00158 760728 15 GATTGAAATTAGAAA ............... scaffold40703 ScafM SNP 0044.scaffold00158 760764 1 G T scaffold40703 ScafM SNP 0044.scaffold00158 761303 1 G C scaffold40703 ReadM SNP 0044.scaffold00158 763412 1 C T - ReadM SNP 0044.scaffold00158 763960 1 A G - ReadM SNP 0044.scaffold00158 764491 1 G A - ScafM SNP 0044.scaffold00158 764810 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 764816 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 764824 1 T A scaffold1184 ScafM SNP 0044.scaffold00158 764858 1 C A scaffold1184 ScafM SNP 0044.scaffold00158 764863 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 764866 1 C T scaffold1184 ScafM SNP 0044.scaffold00158 764887 1 C T scaffold1184 ScafM SNP 0044.scaffold00158 764889 2 AT GA scaffold1184 ScafM SNP 0044.scaffold00158 764899 1 A T scaffold1184 ScafM SNP 0044.scaffold00158 764901 1 A C scaffold1184 ScafM SNP 0044.scaffold00158 764911 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 764925 1 T C scaffold1184 ScafM SNP 0044.scaffold00158 764928 2 CT GC scaffold1184 ScafM SNP 0044.scaffold00158 764933 1 T C scaffold1184 ScafM SNP 0044.scaffold00158 764936 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 764954 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 764956 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 764979 1 G C scaffold1184 ScafM SNP 0044.scaffold00158 764993 1 C T scaffold1184 ScafM SNP 0044.scaffold00158 764998 2 GT AC scaffold1184 ScafM SNP 0044.scaffold00158 765001 1 G A scaffold1184 ScafM INDEL 0044.scaffold00158 765009 12 ............ CTGTTGAGGGGC scaffold1184 ReadM SNP 0044.scaffold00158 765010 1 T C - ScafM INDEL 0044.scaffold00158 765010 2 .. AA scaffold1184 ScafM INDEL 0044.scaffold00158 765011 1 . T scaffold1184 ScafM SNP 0044.scaffold00158 765021 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 765033 1 G C scaffold1184 ScafM SNP 0044.scaffold00158 765042 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 765064 1 C T scaffold1184 ScafM SNP 0044.scaffold00158 765082 1 A C scaffold1184 ScafM SNP 0044.scaffold00158 765086 1 C G scaffold1184 ScafM INDEL 0044.scaffold00158 765088 2 .C TT scaffold1184 ScafM SNP 0044.scaffold00158 765093 1 A C scaffold1184 ScafM INDEL 0044.scaffold00158 765097 1 . C scaffold1184 ScafM SNP 0044.scaffold00158 765099 1 T C scaffold1184 ScafM SNP 0044.scaffold00158 765109 1 T C scaffold1184 ScafM SNP 0044.scaffold00158 765112 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 765124 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 765144 1 C A scaffold1184 ScafM SNP 0044.scaffold00158 765151 1 C T scaffold1184 ScafM INDEL 0044.scaffold00158 765155 1 . C scaffold1184 ScafM INDEL 0044.scaffold00158 765160 1 T . scaffold1184 ScafM SNP 0044.scaffold00158 765162 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 765178 1 T C scaffold1184 ScafM INDEL 0044.scaffold00158 765180 1 . T scaffold1184 ScafM SNP 0044.scaffold00158 765182 1 G C scaffold1184 ScafM SNP 0044.scaffold00158 765191 1 A T scaffold1184 ScafM SNP 0044.scaffold00158 765215 1 G T scaffold1184 ScafM SNP 0044.scaffold00158 765221 1 G T scaffold1184 ScafM INDEL 0044.scaffold00158 765230 1 . C scaffold1184 ScafM SNP 0044.scaffold00158 765247 1 G C scaffold1184 ScafM SNP 0044.scaffold00158 765254 1 T G scaffold1184 ScafM SNP 0044.scaffold00158 765258 2 TC CA scaffold1184 ScafM SNP 0044.scaffold00158 765271 1 G T scaffold1184 ScafM INDEL 0044.scaffold00158 765274 2 .. AT scaffold1184 ScafM SNP 0044.scaffold00158 765289 1 T G scaffold1184 ScafM SNP 0044.scaffold00158 765299 1 T G scaffold1184 ScafM SNP 0044.scaffold00158 765304 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 765310 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 765317 2 TA GT scaffold1184 ScafM SNP 0044.scaffold00158 765320 1 T G scaffold1184 ScafM INDEL 0044.scaffold00158 765322 2 .C TT scaffold1184 ScafM SNP 0044.scaffold00158 765326 1 A T scaffold1184 ScafM INDEL 0044.scaffold00158 765328 1 T . scaffold1184 ScafM SNP 0044.scaffold00158 765336 2 TC CT scaffold1184 ScafM SNP 0044.scaffold00158 765362 1 C T scaffold1184 ScafM SNP 0044.scaffold00158 765364 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 765384 1 G T scaffold1184 ScafM SNP 0044.scaffold00158 765386 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 765400 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 765402 1 G A scaffold1184 ScafM SNP 0044.scaffold00158 765421 1 T C scaffold1184 ScafM SNP 0044.scaffold00158 765434 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 765437 1 T A scaffold1184 ScafM SNP 0044.scaffold00158 765446 1 C G scaffold1184 ScafM SNP 0044.scaffold00158 765449 1 A G scaffold1184 ScafM SNP 0044.scaffold00158 765452 1 T C scaffold1184 ReadM SNP 0044.scaffold00158 765618 1 T C - ReadM INDEL 0044.scaffold00158 765996 2 .. TT - Both SNP 0044.scaffold00158 766222 1 T C scaffold13465 ScafM SNP 0044.scaffold00158 766287 1 T C scaffold13465 ReadM INDEL 0044.scaffold00158 766687 1 . A - ScafM SNP 0044.scaffold00158 767168 1 A C scaffold13465 ScafM SNP 0044.scaffold00158 767255 2 AA TC scaffold13465 ScafM SNP 0044.scaffold00158 767295 1 C A scaffold13465 ScafM INDEL 0044.scaffold00158 767576 8 ........ CTGTGGCT scaffold13465 Both SNP 0044.scaffold00158 767614 1 A G scaffold13465 Both SNP 0044.scaffold00158 767810 1 C T scaffold13465 ScafM SNP 0044.scaffold00158 767891 1 T A scaffold13465 ScafM SNP 0044.scaffold00158 767910 1 C T scaffold13465 ScafM SNP 0044.scaffold00158 768123 1 C G scaffold13465 ScafM INDEL 0044.scaffold00158 768222 2 TT .. scaffold13465 Both SNP 0044.scaffold00158 769652 1 A C scaffold13465 ScafM SNP 0044.scaffold00158 769773 1 G A scaffold13465 Both SNP 0044.scaffold00158 769919 1 T C scaffold13465 ScafM INDEL 0044.scaffold00158 769990 74 .......................................................................... CCAATTTTTGTATTTATCCTATCAATATAACTTCAATAAGACTAATCAAAAAAGACATTCATTAAAAGAAAAAA scaffold13465 Both SNP 0044.scaffold00158 770232 1 A G scaffold13465 Both SNP 0044.scaffold00158 771781 1 A G scaffold13465 Both SNP 0044.scaffold00158 772277 1 A G scaffold13465 Both SNP 0044.scaffold00158 772339 1 C T scaffold13465 ScafM SNP 0044.scaffold00158 772887 1 G A scaffold13465 ScafM SNP 0044.scaffold00158 773734 1 G A scaffold13465 Both SNP 0044.scaffold00158 774779 1 C G scaffold13465 ScafM SNP 0044.scaffold00158 775656 1 C G scaffold13465 ScafM SNP 0044.scaffold00158 775689 1 G A scaffold13465 ReadM SNP 0044.scaffold00158 777823 1 T C - ReadM SNP 0044.scaffold00158 778203 1 C T - ScafM SNP 0044.scaffold00158 780329 1 G A C19705331 ScafM INDEL 0044.scaffold00158 782611 2 .. TA scaffold13465 ScafM SNP 0044.scaffold00158 782614 1 G C scaffold13465 ScafM INDEL 0044.scaffold00158 783210 26 AAGAAAGAGCAATTCAGATTATTCCC .......................... scaffold13465 ScafM INDEL 0044.scaffold00158 783237 5 CAAAA ..... scaffold13465 ScafM SNP 0044.scaffold00158 783383 1 G A scaffold13465 ScafM SNP 0044.scaffold00158 783404 1 T A scaffold13465 ScafM SNP 0044.scaffold00158 786271 1 C T scaffold13465 ScafM SNP 0044.scaffold00158 787202 1 A T scaffold13465 ScafM SNP 0044.scaffold00158 788156 1 G C scaffold13465 ScafM SNP 0044.scaffold00158 788193 1 G C scaffold13465 ScafM SNP 0044.scaffold00158 788197 1 A G scaffold13465 Both SNP 0044.scaffold00158 788204 1 A T scaffold13465 ReadM SNP 0044.scaffold00158 788574 1 T C - ReadM SNP 0044.scaffold00158 789012 1 C T - ReadM SNP 0044.scaffold00158 790879 1 T G - Both SNP 0044.scaffold00158 792731 1 A T scaffold14598 ScafM SNP 0044.scaffold00158 792894 1 C A scaffold14598 ScafM INDEL 0044.scaffold00158 792896 2 TG .. scaffold14598 ScafM SNP 0044.scaffold00158 792929 1 G A scaffold14598 ScafM SNP 0044.scaffold00158 792934 1 G A scaffold14598 ReadM SNP 0044.scaffold00158 793774 1 A T - ReadM SNP 0044.scaffold00158 796670 1 G A - ReadM SNP 0044.scaffold00158 797621 1 C T - ReadM SNP 0044.scaffold00158 798843 1 A G - ReadM SNP 0044.scaffold00158 800853 1 G A - ReadM SNP 0044.scaffold00158 803117 1 T C - ReadM SNP 0044.scaffold00158 803549 1 G A - ReadM SNP 0044.scaffold00158 804174 1 C A - ReadM SNP 0044.scaffold00158 804340 1 G C - ReadM SNP 0044.scaffold00158 806514 1 T C - ReadM SNP 0044.scaffold00158 806863 1 G A - ReadM SNP 0044.scaffold00158 806991 1 T C - ReadM INDEL 0044.scaffold00158 807510 1 . T - ReadM SNP 0044.scaffold00158 807606 1 G A - ReadM SNP 0044.scaffold00158 807711 1 G T - Both SNP 0044.scaffold00158 808363 1 G A scaffold25002 ScafM SNP 0044.scaffold00158 808576 1 A T scaffold25002 Both INDEL 0044.scaffold00158 812256 1 . C scaffold25002 ScafM INDEL 0044.scaffold00158 812370 1 . A scaffold25002 ScafM SNP 0044.scaffold00158 812728 1 T G scaffold25002 ScafM SNP 0044.scaffold00158 812787 1 T C scaffold25002 ReadM SNP 0044.scaffold00158 813223 1 T C - ReadM INDEL 0044.scaffold00158 815685 2 AT .. - ScafM SNP 0044.scaffold00158 816306 1 T A scaffold25002 ReadM SNP 0044.scaffold00158 816560 1 A G - ScafM SNP 0044.scaffold00158 816970 1 A G scaffold25002 ScafM SNP 0044.scaffold00158 817080 1 C T scaffold25002 ScafM SNP 0044.scaffold00158 817096 1 G A scaffold25002 Both SNP 0044.scaffold00158 817133 1 A G scaffold25002 ScafM SNP 0044.scaffold00158 817154 1 T C scaffold25002 Both INDEL 0044.scaffold00158 817170 1 A . scaffold25002 ScafM SNP 0044.scaffold00158 817204 1 A G scaffold25002 ReadM SNP 0044.scaffold00158 817712 1 C T - ScafM INDEL 0044.scaffold00158 819233 2 GG .. scaffold25002 ScafM SNP 0044.scaffold00158 819236 1 G T scaffold25002 Both SNP 0044.scaffold00158 819252 1 C T scaffold25002 ReadM SNP 0044.scaffold00158 819401 1 T G - Both SNP 0044.scaffold00158 819986 1 T C scaffold25002 Both SNP 0044.scaffold00158 820141 1 T C scaffold25002 Both SNP 0044.scaffold00158 820254 1 T C scaffold25002 ScafM SNP 0044.scaffold00158 820591 1 A T scaffold25002 ScafM SNP 0044.scaffold00158 827209 1 T C scaffold35244 ScafM SNP 0044.scaffold00158 827251 1 T C scaffold35244 ScafM INDEL 0044.scaffold00158 827261 1 . A scaffold35244 ScafM SNP 0044.scaffold00158 827266 1 A T scaffold35244 ScafM SNP 0044.scaffold00158 827268 1 C T scaffold35244 ScafM SNP 0044.scaffold00158 827899 1 G A scaffold37630 ScafM INDEL 0044.scaffold00158 827913 3 TGA ... scaffold37630 ScafM SNP 0044.scaffold00158 827968 1 A G scaffold37630 ScafM SNP 0044.scaffold00158 828039 1 G A scaffold37630 ReadM SNP 0044.scaffold00158 828421 1 C T - ReadM SNP 0044.scaffold00158 833390 1 A G - ReadM SNP 0044.scaffold00158 833607 1 T C - ReadM SNP 0044.scaffold00158 833967 1 A G - ReadM SNP 0044.scaffold00158 834138 1 T G - ReadM INDEL 0044.scaffold00158 834579 1 . T - ReadM SNP 0044.scaffold00158 834903 1 T A - ReadM SNP 0044.scaffold00158 835072 1 C T - ReadM SNP 0044.scaffold00158 835867 1 G A - ReadM SNP 0044.scaffold00158 836465 1 C A - ReadM SNP 0044.scaffold00158 836630 1 T G - ReadM SNP 0044.scaffold00158 837040 1 G A - ReadM SNP 0044.scaffold00158 837123 1 G T - ReadM SNP 0044.scaffold00158 837164 1 T A - ReadM SNP 0044.scaffold00158 837576 1 G A - ReadM SNP 0044.scaffold00158 842417 1 G A - ReadM SNP 0044.scaffold00158 842549 1 G C - ReadM SNP 0044.scaffold00158 844900 1 A C - ReadM SNP 0044.scaffold00158 844921 1 A G - ReadM SNP 0044.scaffold00158 845073 1 T C - ReadM SNP 0044.scaffold00158 845766 1 T C - ReadM SNP 0044.scaffold00158 845771 1 T C - ReadM SNP 0044.scaffold00158 847388 1 C T - ScafM SNP 0044.scaffold00158 848525 1 C T scaffold20593 ScafM SNP 0044.scaffold00158 848560 1 C T scaffold20593 ScafM SNP 0044.scaffold00158 848593 1 A G scaffold20593 ScafM INDEL 0044.scaffold00158 848665 3 ... CCT scaffold20593 ScafM SNP 0044.scaffold00158 848667 1 A C scaffold20593 ScafM SNP 0044.scaffold00158 848697 1 G C scaffold20593 ScafM SNP 0044.scaffold00158 848700 1 A G scaffold20593 Both SNP 0044.scaffold00158 848741 1 T C scaffold20593 ReadM SNP 0044.scaffold00158 848875 1 A C - ReadM SNP 0044.scaffold00158 849463 1 T C - ReadM SNP 0044.scaffold00158 849711 1 T C - ReadM INDEL 0044.scaffold00158 849907 1 . T - ReadM SNP 0044.scaffold00158 849971 1 T C - ReadM SNP 0044.scaffold00158 850295 1 C T - ReadM SNP 0044.scaffold00158 850716 1 T C - ReadM SNP 0044.scaffold00158 850724 1 G A - ReadM SNP 0044.scaffold00158 851807 1 G A - ReadM SNP 0044.scaffold00158 852441 1 T A - ReadM SNP 0044.scaffold00158 852495 1 G A - ReadM SNP 0044.scaffold00158 853100 1 G A - ReadM SNP 0044.scaffold00158 853601 1 T A - ReadM SNP 0044.scaffold00158 854123 1 T A - ReadM SNP 0044.scaffold00158 854576 1 A C - ReadM SNP 0044.scaffold00158 857033 1 A G - ReadM INDEL 0044.scaffold00158 857801 1 C . - ReadM SNP 0044.scaffold00158 858175 1 A T - ReadM SNP 0044.scaffold00158 858419 1 G T - ScafM SNP 0044.scaffold00158 859108 1 G A scaffold502 Both SNP 0044.scaffold00158 859256 1 T C scaffold502 ScafM SNP 0044.scaffold00158 859817 1 G A scaffold502 ScafM SNP 0044.scaffold00158 859994 1 G A scaffold502 ScafM SNP 0044.scaffold00158 861230 1 A G scaffold502 ScafM INDEL 0044.scaffold00158 861498 20 .................... GGGAGGGGGGAGGGGGGAGG scaffold502 ScafM INDEL 0044.scaffold00158 861757 76 ............................................................................ TCAATGTAATGGACACCATTGTGCAAATAAACTACCGCACGCACTAATATAAAGAAAAAGAAGAAATATATTGGTT scaffold502 Both SNP 0044.scaffold00158 862918 1 G A scaffold502 ReadM INDEL 0044.scaffold00158 864113 1 C . - ReadM SNP 0044.scaffold00158 864305 1 A C - ReadM SNP 0044.scaffold00158 864528 1 A C - ReadM SNP 0044.scaffold00158 866348 1 A T - ReadM SNP 0044.scaffold00158 866469 1 T G - ReadM SNP 0044.scaffold00158 866717 1 C T - ReadM SNP 0044.scaffold00158 868866 1 A G - ReadM SNP 0044.scaffold00158 869293 1 C T - ReadM SNP 0044.scaffold00158 869343 1 C T - ReadM SNP 0044.scaffold00158 869392 1 T C - ReadM SNP 0044.scaffold00158 869626 1 C T - ReadM SNP 0044.scaffold00158 870246 1 T G - ScafM SNP 0044.scaffold00158 870459 1 T C scaffold502 ReadM SNP 0044.scaffold00158 871260 1 C G - ReadM SNP 0044.scaffold00158 871298 1 C T - ScafM SNP 0044.scaffold00158 871379 1 G A scaffold502 ScafM SNP 0044.scaffold00158 871445 1 C T scaffold502 ReadM SNP 0044.scaffold00158 871551 1 G A - ReadM SNP 0044.scaffold00158 873916 1 A G - ReadM SNP 0044.scaffold00158 874028 1 A G - ReadM SNP 0044.scaffold00158 874991 1 T C - ReadM SNP 0044.scaffold00158 875392 1 A T - ReadM SNP 0044.scaffold00158 876406 1 C A - ReadM SNP 0044.scaffold00158 877852 1 C T - ReadM SNP 0044.scaffold00158 878178 1 A G - ReadM INDEL 0044.scaffold00158 879246 1 . G - ReadM SNP 0044.scaffold00158 879899 1 T G - ReadM SNP 0044.scaffold00158 880220 1 A G - ReadM SNP 0044.scaffold00158 880603 1 C G - ReadM SNP 0044.scaffold00158 881599 1 G C - ReadM SNP 0044.scaffold00158 881870 1 C T - ReadM SNP 0044.scaffold00158 882510 1 T C - ReadM SNP 0044.scaffold00158 882776 1 C G - ReadM SNP 0044.scaffold00158 883441 1 G A - ReadM SNP 0044.scaffold00158 883811 1 G A - ReadM INDEL 0044.scaffold00158 884479 2 .. TT - ReadM SNP 0044.scaffold00158 885056 1 T C - ReadM SNP 0044.scaffold00158 885177 1 T C - ReadM SNP 0044.scaffold00158 885209 1 C T - ReadM SNP 0044.scaffold00158 885260 1 A C - ReadM SNP 0044.scaffold00158 890425 1 T C - ReadM SNP 0044.scaffold00158 890501 1 G T - ReadM SNP 0044.scaffold00158 890594 1 A G - ReadM SNP 0044.scaffold00158 890601 1 A G - ReadM SNP 0044.scaffold00158 890854 1 T G - ReadM SNP 0044.scaffold00158 891202 1 G T - ReadM SNP 0044.scaffold00158 891283 1 C T - ReadM INDEL 0044.scaffold00158 891451 1 . G - ReadM SNP 0044.scaffold00158 891696 1 T C - ReadM SNP 0044.scaffold00158 892479 1 T C - ReadM SNP 0044.scaffold00158 893438 1 A G - ReadM SNP 0044.scaffold00158 894329 1 C G - ReadM SNP 0044.scaffold00158 894407 1 G A - ReadM SNP 0044.scaffold00158 894491 1 A G - ReadM SNP 0044.scaffold00158 894584 1 T C - ReadM SNP 0044.scaffold00158 894590 1 G A - ReadM SNP 0044.scaffold00158 894810 1 A G - ReadM SNP 0044.scaffold00158 896055 1 C T - ReadM SNP 0044.scaffold00158 896067 1 A T - ReadM SNP 0044.scaffold00158 896156 1 C A - ReadM SNP 0044.scaffold00158 896297 1 G T - ReadM SNP 0044.scaffold00158 896336 1 C G - ReadM SNP 0044.scaffold00158 896603 1 C T - ReadM SNP 0044.scaffold00158 896644 1 C G - ReadM SNP 0044.scaffold00158 896657 1 T C - ScafM INDEL 0044.scaffold00158 896713 1 T . scaffold19456 ScafM INDEL 0044.scaffold00158 896726 1 . A scaffold19456 ScafM SNP 0044.scaffold00158 896853 1 A G scaffold19456 ScafM SNP 0044.scaffold00158 896896 2 AT GC scaffold19456 Both SNP 0044.scaffold00158 896994 1 G A scaffold19456 Both SNP 0044.scaffold00158 897021 1 A T scaffold19456 ScafM INDEL 0044.scaffold00158 897042 1 . T scaffold19456 ScafM SNP 0044.scaffold00158 897073 1 C T scaffold19456 ReadM SNP 0044.scaffold00158 897351 1 G C - Both INDEL 0044.scaffold00158 898087 1 . G scaffold19456 ScafM SNP 0044.scaffold00158 898578 1 C T scaffold8510 ScafM SNP 0044.scaffold00158 898625 1 A G scaffold8510 ScafM SNP 0044.scaffold00158 898627 1 C A scaffold8510 ScafM SNP 0044.scaffold00158 898629 1 G C scaffold8510 ScafM SNP 0044.scaffold00158 898638 1 A G scaffold8510 Both SNP 0044.scaffold00158 898647 1 G A scaffold8510 ScafM SNP 0044.scaffold00158 898725 1 A C scaffold8510 Both SNP 0044.scaffold00158 899203 1 A C scaffold8945 ReadM INDEL 0044.scaffold00158 899257 1 A . - ScafM INDEL 0044.scaffold00158 899429 1 . T scaffold8945 ScafM SNP 0044.scaffold00158 899515 1 A T scaffold8945 Both SNP 0044.scaffold00158 899724 1 C A scaffold8945 Both SNP 0044.scaffold00158 900051 1 T C scaffold8945 ScafM INDEL 0044.scaffold00158 900086 2 TT .. scaffold8945 Both SNP 0044.scaffold00158 900124 1 T A scaffold8945 ScafM SNP 0044.scaffold00158 900158 1 T C scaffold8945 ReadM SNP 0044.scaffold00158 900760 1 T C - ScafM SNP 0044.scaffold00158 900820 1 G A scaffold8945 Both SNP 0044.scaffold00158 900977 1 C T scaffold8945 Both SNP 0044.scaffold00158 901036 1 G A scaffold8945 Both SNP 0044.scaffold00158 901566 1 T C scaffold8945 ScafM SNP 0044.scaffold00158 901784 1 C G scaffold8945 Both SNP 0044.scaffold00158 901817 1 T G scaffold8945 ScafM SNP 0044.scaffold00158 901920 1 G A scaffold8945 ScafM SNP 0044.scaffold00158 902054 3 CAA ATT scaffold8945 ReadM SNP 0044.scaffold00158 902405 1 T G - ReadM INDEL 0044.scaffold00158 902685 1 T . - ReadM SNP 0044.scaffold00158 902907 1 T C - ReadM SNP 0044.scaffold00158 903534 1 T A - ScafM INDEL 0044.scaffold00158 904060 4 ATAT .... scaffold62981 ReadM SNP 0044.scaffold00158 905289 1 C T - ReadM SNP 0044.scaffold00158 905425 1 G A - ReadM SNP 0044.scaffold00158 905443 1 A G - ReadM SNP 0044.scaffold00158 906504 1 A G - ReadM SNP 0044.scaffold00158 906540 1 A G - ReadM SNP 0044.scaffold00158 906548 1 A T - ReadM SNP 0044.scaffold00158 906577 1 T C - ReadM SNP 0044.scaffold00158 906892 1 T C - ReadM INDEL 0044.scaffold00158 907146 1 A . - ReadM INDEL 0044.scaffold00158 907147 2 AT .. - ReadM SNP 0044.scaffold00158 907159 1 A G - ReadM SNP 0044.scaffold00158 907229 1 C A - ReadM SNP 0044.scaffold00158 907415 1 A G - ReadM SNP 0044.scaffold00158 907702 1 A G - ReadM SNP 0044.scaffold00158 907763 1 T A - ReadM SNP 0044.scaffold00158 910007 1 G A - ReadM SNP 0044.scaffold00158 910742 1 T C - ReadM SNP 0044.scaffold00158 910970 1 T C - ReadM SNP 0044.scaffold00158 911140 1 G A - ReadM SNP 0044.scaffold00158 911630 1 A G - ReadM SNP 0044.scaffold00158 914024 1 G A - ReadM SNP 0044.scaffold00158 914799 1 A G - ReadM INDEL 0044.scaffold00158 915481 1 T . - ReadM SNP 0044.scaffold00158 915830 1 A C - ReadM SNP 0044.scaffold00158 915917 1 C T - ReadM SNP 0044.scaffold00158 916001 1 T C - ReadM SNP 0044.scaffold00158 916419 1 C T - ReadM SNP 0044.scaffold00158 917081 1 A C - ReadM SNP 0044.scaffold00158 917713 1 A T - ScafM SNP 0044.scaffold00158 917813 1 G A scaffold40865 Both SNP 0044.scaffold00158 917846 1 C G scaffold40865 Both SNP 0044.scaffold00158 918272 1 A G scaffold40865 ScafM INDEL 0044.scaffold00158 918412 6 ...... TCCATG scaffold40865 ScafM SNP 0044.scaffold00158 918416 1 G C scaffold40865 ScafM SNP 0044.scaffold00158 918420 1 G C scaffold40865 ScafM SNP 0044.scaffold00158 918422 1 G C scaffold40865 ScafM INDEL 0044.scaffold00158 918423 4 .... TTCC scaffold40865 ScafM SNP 0044.scaffold00158 918425 1 G T scaffold40865 ScafM INDEL 0044.scaffold00158 918429 1 . A scaffold40865 ScafM INDEL 0044.scaffold00158 918431 5 ..... CATAA scaffold40865 ScafM INDEL 0044.scaffold00158 918432 1 . C scaffold40865 ScafM SNP 0044.scaffold00158 918434 1 G T scaffold40865 ScafM SNP 0044.scaffold00158 918474 1 C T scaffold40865 ScafM SNP 0044.scaffold00158 918554 1 T A scaffold40865 ScafM SNP 0044.scaffold00158 918566 1 T G scaffold40865 ScafM SNP 0044.scaffold00158 918570 1 G A scaffold40865 ScafM SNP 0044.scaffold00158 918580 1 A C scaffold40865 ScafM SNP 0044.scaffold00158 918585 1 A C scaffold40865 ScafM SNP 0044.scaffold00158 918639 2 GT TC scaffold40865 ScafM SNP 0044.scaffold00158 918688 1 A T scaffold40865 ReadM SNP 0044.scaffold00158 920495 1 C T - ReadM SNP 0044.scaffold00158 920606 1 A G - ReadM SNP 0044.scaffold00158 920784 1 C T - ReadM SNP 0044.scaffold00158 921250 1 C A - Both SNP 0044.scaffold00158 921322 1 T C scaffold37217 Both SNP 0044.scaffold00158 921424 1 T C scaffold37217 ScafM SNP 0044.scaffold00158 921440 1 C T scaffold37217 ScafM SNP 0044.scaffold00158 921485 1 G A scaffold37217 ReadM SNP 0044.scaffold00158 922937 1 A G - ReadM SNP 0044.scaffold00158 924096 1 C A - ReadM INDEL 0044.scaffold00158 924882 2 TT .. - ReadM INDEL 0044.scaffold00158 924885 2 TA .. - ReadM SNP 0044.scaffold00158 925671 1 G C - ReadM SNP 0044.scaffold00158 925809 1 A T - ReadM SNP 0044.scaffold00158 925973 1 A G - ReadM SNP 0044.scaffold00158 926031 1 A C - ReadM SNP 0044.scaffold00158 926310 1 T C - ReadM SNP 0044.scaffold00158 926829 1 G C - ReadM SNP 0044.scaffold00158 927035 1 A G - ReadM SNP 0044.scaffold00158 927313 1 T A - ReadM SNP 0044.scaffold00158 927344 1 T G - ScafM SNP 0044.scaffold00158 927424 1 C T scaffold24905 ScafM SNP 0044.scaffold00158 927430 1 T C scaffold24905 ScafM SNP 0044.scaffold00158 927438 1 C T scaffold24905 ScafM INDEL 0044.scaffold00158 927463 4 .... AATG scaffold24905 ReadM SNP 0044.scaffold00158 927756 1 T C - Both SNP 0044.scaffold00158 928519 1 G C scaffold22746 Both SNP 0044.scaffold00158 928611 1 G C scaffold22746 ReadM SNP 0044.scaffold00158 929061 1 T C - ReadM SNP 0044.scaffold00158 929095 1 A G - ReadM SNP 0044.scaffold00158 929394 1 T G - ReadM SNP 0044.scaffold00158 930043 1 A G - ReadM SNP 0044.scaffold00158 930261 1 T G - ReadM SNP 0044.scaffold00158 931275 1 T C - ReadM SNP 0044.scaffold00158 931621 1 G A - ReadM SNP 0044.scaffold00158 931829 1 A G - ReadM SNP 0044.scaffold00158 931837 1 C A - ReadM SNP 0044.scaffold00158 932747 1 A G - ReadM SNP 0044.scaffold00158 932986 1 C G - Both SNP 0044.scaffold00158 933151 1 A G scaffold15395 ScafM SNP 0044.scaffold00158 934436 1 C A scaffold2569 ScafM SNP 0044.scaffold00158 934442 1 G C scaffold2569 ReadM INDEL 0044.scaffold00158 934473 2 AA .. - ScafM SNP 0044.scaffold00158 934477 2 AA CT scaffold2569 ScafM SNP 0044.scaffold00158 934485 1 C A scaffold2569 ScafM SNP 0044.scaffold00158 934517 1 A T scaffold2569 ScafM SNP 0044.scaffold00158 934543 2 CT GC scaffold2569 ScafM SNP 0044.scaffold00158 934553 1 T A scaffold2569 ScafM SNP 0044.scaffold00158 934556 1 A T scaffold2569 ScafM SNP 0044.scaffold00158 934585 2 TT AC scaffold2569 ScafM SNP 0044.scaffold00158 934591 1 T A scaffold2569 ScafM SNP 0044.scaffold00158 934601 1 T C scaffold2569 ScafM SNP 0044.scaffold00158 934607 1 A C scaffold2569 ScafM SNP 0044.scaffold00158 934609 1 A C scaffold2569 ScafM SNP 0044.scaffold00158 934616 1 A T scaffold2569 ScafM SNP 0044.scaffold00158 934620 1 C T scaffold2569 ReadM SNP 0044.scaffold00158 934627 1 A C - Both SNP 0044.scaffold00158 934719 1 C T scaffold2569 ScafM SNP 0044.scaffold00158 934734 1 G T scaffold2569 ScafM SNP 0044.scaffold00158 934741 1 G A scaffold2569 ScafM SNP 0044.scaffold00158 934745 1 G A scaffold2569 ScafM SNP 0044.scaffold00158 934750 1 G A scaffold2569 ScafM SNP 0044.scaffold00158 934760 1 C T scaffold2569 ScafM SNP 0044.scaffold00158 934764 2 AC GT scaffold2569 ScafM SNP 0044.scaffold00158 934789 1 G A scaffold2569 ScafM INDEL 0044.scaffold00158 934817 1 . A scaffold2569 ScafM SNP 0044.scaffold00158 934821 1 G A scaffold2569 ScafM SNP 0044.scaffold00158 934823 1 G A scaffold2569 ReadM SNP 0044.scaffold00158 935054 1 G C - ReadM SNP 0044.scaffold00158 935234 1 A C - ReadM SNP 0044.scaffold00158 935248 1 T C - ReadM SNP 0044.scaffold00158 936066 1 C T - ScafM SNP 0044.scaffold00158 936266 1 A T scaffold9297 ScafM SNP 0044.scaffold00158 936268 1 A T scaffold9297 ScafM SNP 0044.scaffold00158 936287 1 G A scaffold9297 ScafM SNP 0044.scaffold00158 936305 1 A T scaffold9297 ScafM SNP 0044.scaffold00158 936340 1 T A scaffold9297 ScafM SNP 0044.scaffold00158 936347 1 A T scaffold9297 ScafM SNP 0044.scaffold00158 936363 1 T C scaffold9297 ReadM SNP 0044.scaffold00158 936588 1 A G - ReadM SNP 0044.scaffold00158 936689 1 A C - ReadM SNP 0044.scaffold00158 936736 1 A C - ScafM SNP 0044.scaffold00158 936815 1 C T scaffold15395 ScafM SNP 0044.scaffold00158 936830 1 T A scaffold15395 ScafM SNP 0044.scaffold00158 936845 1 G T scaffold15395 ScafM SNP 0044.scaffold00158 936970 1 T C scaffold15395 ScafM SNP 0044.scaffold00158 937122 1 T C scaffold15395 ScafM SNP 0044.scaffold00158 937251 1 A T scaffold7899 ScafM SNP 0044.scaffold00158 937259 1 C G scaffold7899 ScafM SNP 0044.scaffold00158 937312 1 C G scaffold7899 ScafM INDEL 0044.scaffold00158 937382 3 ... ATA scaffold7899 ScafM INDEL 0044.scaffold00158 937383 1 . A scaffold7899 ScafM SNP 0044.scaffold00158 937388 1 G A scaffold7899 ScafM SNP 0044.scaffold00158 937397 1 A G scaffold7899 ScafM SNP 0044.scaffold00158 937403 1 A G scaffold7899 ScafM SNP 0044.scaffold00158 937453 1 T C scaffold7899 ScafM INDEL 0044.scaffold00158 937470 4 .... TAGT scaffold7899 ScafM SNP 0044.scaffold00158 937472 1 A T scaffold7899 ScafM SNP 0044.scaffold00158 937484 1 T C scaffold7899 ScafM SNP 0044.scaffold00158 937565 1 G A scaffold7899 Both INDEL 0044.scaffold00158 937571 1 T . scaffold7899 ScafM SNP 0044.scaffold00158 937598 1 C T scaffold7899 ScafM SNP 0044.scaffold00158 937603 1 A T scaffold7899 ScafM SNP 0044.scaffold00158 937610 1 G A scaffold7899 ScafM SNP 0044.scaffold00158 937620 1 C T scaffold7899 Both SNP 0044.scaffold00158 937622 1 A G scaffold7899 ScafM INDEL 0044.scaffold00158 937634 1 A . scaffold7899 ScafM SNP 0044.scaffold00158 937636 1 T C scaffold7899 ScafM SNP 0044.scaffold00158 937638 1 A G scaffold7899 ScafM SNP 0044.scaffold00158 937678 1 C T scaffold7899 ScafM SNP 0044.scaffold00158 937704 1 C T scaffold7899 ScafM SNP 0044.scaffold00158 937706 1 T A scaffold7899 ScafM SNP 0044.scaffold00158 937736 1 T C scaffold7899 ScafM INDEL 0044.scaffold00158 937756 1 C . scaffold7899 ScafM SNP 0044.scaffold00158 937766 1 A T scaffold7899 ReadM SNP 0044.scaffold00158 937800 1 G A - ScafM SNP 0044.scaffold00158 937803 1 A T scaffold7899 ScafM SNP 0044.scaffold00158 937811 1 A G scaffold7899 ScafM SNP 0044.scaffold00158 937816 1 C T scaffold7899 ScafM SNP 0044.scaffold00158 937845 1 G T scaffold7899 ScafM SNP 0044.scaffold00158 937862 1 A C scaffold7899 ScafM SNP 0044.scaffold00158 937871 1 T C scaffold7899 ScafM INDEL 0044.scaffold00158 937880 1 A . scaffold7899 ScafM SNP 0044.scaffold00158 937887 1 T C scaffold7899 ScafM SNP 0044.scaffold00158 937911 1 A G scaffold7899 ScafM SNP 0044.scaffold00158 937941 1 G C scaffold7899 ScafM SNP 0044.scaffold00158 937956 1 T C scaffold7899 ScafM SNP 0044.scaffold00158 937992 1 T C scaffold7899 ScafM SNP 0044.scaffold00158 938013 1 T G scaffold7899 ScafM SNP 0044.scaffold00158 938088 1 A T scaffold7899 ScafM SNP 0044.scaffold00158 938096 1 G A scaffold7899 ReadM SNP 0044.scaffold00158 938175 1 G A - ScafM SNP 0044.scaffold00158 938201 1 C A scaffold67960 ScafM SNP 0044.scaffold00158 938203 1 A G scaffold67960 ReadM SNP 0044.scaffold00158 938744 1 G A - ReadM INDEL 0044.scaffold00158 938826 3 TAT ... - ReadM SNP 0044.scaffold00158 938911 1 C G - ReadM SNP 0044.scaffold00158 939638 1 T C - ReadM SNP 0044.scaffold00158 939818 1 A G - ScafM SNP 0044.scaffold00158 940159 1 C A scaffold15395 Both SNP 0044.scaffold00158 940252 1 A T scaffold15395 ReadM SNP 0044.scaffold00158 940372 1 C T - ReadM SNP 0044.scaffold00158 941036 1 G A - ReadM SNP 0044.scaffold00158 941602 1 C A - ReadM SNP 0044.scaffold00158 941616 1 T C - ReadM SNP 0044.scaffold00158 941737 1 T G - ReadM SNP 0044.scaffold00158 941924 1 A G - ReadM SNP 0044.scaffold00158 942045 1 T A - ReadM INDEL 0044.scaffold00158 942073 1 . A - ReadM SNP 0044.scaffold00158 942359 1 G T - ReadM SNP 0044.scaffold00158 943584 1 A G - ReadM SNP 0044.scaffold00158 943700 1 T G - ReadM SNP 0044.scaffold00158 943758 1 G A - ReadM SNP 0044.scaffold00158 944263 1 A G - ReadM SNP 0044.scaffold00158 944594 1 T G - ReadM SNP 0044.scaffold00158 944616 1 A T - ReadM SNP 0044.scaffold00158 945416 1 G A - ReadM SNP 0044.scaffold00158 946437 1 A T - ReadM SNP 0044.scaffold00158 947047 1 A C - ReadM SNP 0044.scaffold00158 947139 1 G A - ReadM SNP 0044.scaffold00158 947328 1 G T - ReadM SNP 0044.scaffold00158 947517 1 C T - ReadM SNP 0044.scaffold00158 948145 1 A G - ReadM SNP 0044.scaffold00158 948365 1 T C - ReadM SNP 0044.scaffold00158 948544 1 T C - ReadM SNP 0044.scaffold00158 949158 1 T C - ReadM SNP 0044.scaffold00158 949171 1 T C - ScafM SNP 0044.scaffold00158 949984 1 T A scaffold25545 ReadM SNP 0044.scaffold00158 951437 1 C T - ReadM SNP 0044.scaffold00158 951574 1 C A - ReadM SNP 0044.scaffold00158 951738 1 T C - ReadM SNP 0044.scaffold00158 952887 1 C G - ReadM SNP 0044.scaffold00158 953546 1 A C - ReadM SNP 0044.scaffold00158 953843 1 G A - ReadM SNP 0044.scaffold00158 953966 1 C A - ReadM SNP 0044.scaffold00158 954170 1 A G - ReadM SNP 0044.scaffold00158 954304 1 G C - ReadM SNP 0044.scaffold00158 954538 1 T C - ReadM SNP 0044.scaffold00158 954769 1 T C - ReadM SNP 0044.scaffold00158 954793 1 T C - ReadM SNP 0044.scaffold00158 955183 1 T G - ReadM SNP 0044.scaffold00158 955656 1 G T - ReadM SNP 0044.scaffold00158 955791 1 C T - ReadM SNP 0044.scaffold00158 955883 1 A G - ReadM SNP 0044.scaffold00158 955892 1 A T - ReadM SNP 0044.scaffold00158 956335 1 T A - ReadM SNP 0044.scaffold00158 956723 1 T A - ReadM SNP 0044.scaffold00158 957404 1 G A - ReadM SNP 0044.scaffold00158 957458 1 A G - ReadM SNP 0044.scaffold00158 957496 1 G A - ReadM SNP 0044.scaffold00158 957566 1 A T - ReadM SNP 0044.scaffold00158 958107 1 G A - ReadM SNP 0044.scaffold00158 958560 1 G C - ScafM SNP 0044.scaffold00158 958863 1 C T scaffold51666 ScafM SNP 0044.scaffold00158 959363 1 T G scaffold51666 ScafM SNP 0044.scaffold00158 959474 1 C A scaffold51666 Both SNP 0044.scaffold00158 959667 1 G A scaffold22271 ScafM SNP 0044.scaffold00158 959708 1 C A scaffold22271 Both SNP 0044.scaffold00158 960074 1 A C scaffold22271 ScafM SNP 0044.scaffold00158 960148 1 T G scaffold22271 ReadM SNP 0044.scaffold00158 962005 1 A C - ReadM SNP 0044.scaffold00158 962017 1 A G - ReadM SNP 0044.scaffold00158 962666 1 C T - ReadM SNP 0044.scaffold00158 962777 1 C T - ReadM INDEL 0044.scaffold00158 962980 1 . A - ReadM INDEL 0044.scaffold00158 963143 1 A . - ScafM SNP 0044.scaffold00158 963832 1 A C C19675315 ScafM SNP 0044.scaffold00158 964556 1 G T C19675315 ScafM SNP 0044.scaffold00158 964605 1 A G C19675315 ReadM SNP 0044.scaffold00158 965084 1 T G - ReadM SNP 0044.scaffold00158 965203 1 T C - ReadM SNP 0044.scaffold00158 965214 1 T C - ReadM SNP 0044.scaffold00158 965280 1 T C - ReadM SNP 0044.scaffold00158 965473 1 A G - ReadM SNP 0044.scaffold00158 965500 1 G C - ScafM SNP 0044.scaffold00158 967692 1 G A scaffold9818 Both SNP 0044.scaffold00158 968253 1 T A scaffold9818 Both SNP 0044.scaffold00158 968278 1 T G scaffold9818 ScafM SNP 0044.scaffold00158 968596 1 T C scaffold9818 Both SNP 0044.scaffold00158 969516 1 A T scaffold70195 ScafM SNP 0044.scaffold00158 970570 1 C G scaffold9818 ScafM SNP 0044.scaffold00158 970668 1 T A scaffold9818 ScafM SNP 0044.scaffold00158 970684 1 G A scaffold9818 ReadM INDEL 0044.scaffold00158 971263 1 A . - ReadM SNP 0044.scaffold00158 971286 1 G C - Both SNP 0044.scaffold00158 971930 1 G A scaffold9818 ReadM SNP 0044.scaffold00158 972176 1 A C - ReadM SNP 0044.scaffold00158 972246 1 A G - ReadM SNP 0044.scaffold00158 972406 1 G A - ReadM INDEL 0044.scaffold00158 973034 1 T . - ReadM SNP 0044.scaffold00158 973052 1 G A - ReadM SNP 0044.scaffold00158 973063 1 G A - ReadM SNP 0044.scaffold00158 973079 1 C A - ReadM SNP 0044.scaffold00158 973333 1 A G - ReadM SNP 0044.scaffold00158 973830 1 T A - ReadM SNP 0044.scaffold00158 973893 1 C A - ReadM SNP 0044.scaffold00158 974619 1 G A - ReadM SNP 0044.scaffold00158 974742 1 A T - ReadM SNP 0044.scaffold00158 975040 1 G A - ReadM SNP 0044.scaffold00158 975179 1 A T - ReadM SNP 0044.scaffold00158 977655 1 G A - ReadM SNP 0044.scaffold00158 978047 1 C A - ReadM SNP 0044.scaffold00158 978475 1 C A - ReadM SNP 0044.scaffold00158 978649 1 T G - ReadM SNP 0044.scaffold00158 978780 1 C T - ReadM SNP 0044.scaffold00158 979083 1 T C - ReadM SNP 0044.scaffold00158 979139 1 A G - ReadM SNP 0044.scaffold00158 979290 1 T C - ReadM SNP 0044.scaffold00158 979432 1 G C - ReadM SNP 0044.scaffold00158 979735 1 C G - ReadM SNP 0044.scaffold00158 979759 1 C T - ReadM SNP 0044.scaffold00158 979789 1 C T - ReadM SNP 0044.scaffold00158 979862 1 A G - ReadM SNP 0044.scaffold00158 980009 1 A G - ReadM SNP 0044.scaffold00158 981750 1 A G - ReadM SNP 0044.scaffold00158 982351 1 C T - ReadM SNP 0044.scaffold00158 982415 1 T C - ReadM SNP 0044.scaffold00158 983898 1 A G - ReadM SNP 0044.scaffold00158 983905 1 G A - ReadM SNP 0044.scaffold00158 984148 1 G T - ReadM SNP 0044.scaffold00158 984408 1 C T - ReadM SNP 0044.scaffold00158 984659 1 T C - ReadM SNP 0044.scaffold00158 984986 1 T A - ReadM SNP 0044.scaffold00158 985234 1 T A - ReadM SNP 0044.scaffold00158 986600 1 C A - Both SNP 0044.scaffold00158 986824 1 G A scaffold9818 Both SNP 0044.scaffold00158 986839 1 A G scaffold9818 Both SNP 0044.scaffold00158 987015 1 G A scaffold9818 ScafM SNP 0044.scaffold00158 987555 1 A G scaffold9818 Both SNP 0044.scaffold00158 987719 1 A C scaffold9818 ReadM SNP 0044.scaffold00158 987862 1 C T - ReadM SNP 0044.scaffold00158 988002 1 T C - ReadM SNP 0044.scaffold00158 988630 1 A C - ReadM SNP 0044.scaffold00158 988672 1 A G - ReadM SNP 0044.scaffold00158 988875 1 T C - ReadM SNP 0044.scaffold00158 988923 1 G T - ReadM SNP 0044.scaffold00158 988991 1 G A - ReadM SNP 0044.scaffold00158 989420 1 G A - ReadM SNP 0044.scaffold00158 989480 1 G T - ReadM SNP 0044.scaffold00158 989873 1 A T - ReadM SNP 0044.scaffold00158 989946 1 C T - ReadM SNP 0044.scaffold00158 989993 1 C A - ReadM SNP 0044.scaffold00158 990007 1 C G - ReadM SNP 0044.scaffold00158 990241 1 G C - ReadM SNP 0044.scaffold00158 990252 1 A G - ReadM SNP 0044.scaffold00158 990495 1 T C - ReadM SNP 0044.scaffold00158 990729 1 T C - ReadM SNP 0044.scaffold00158 990825 1 A C - ReadM SNP 0044.scaffold00158 991098 2 GG AT - ReadM SNP 0044.scaffold00158 991531 1 T C - ReadM SNP 0044.scaffold00158 991560 1 T C - ReadM SNP 0044.scaffold00158 991699 1 G C - ReadM SNP 0044.scaffold00158 991888 1 G A - ReadM SNP 0044.scaffold00158 992042 1 G T - ReadM SNP 0044.scaffold00158 992072 1 T C - ReadM SNP 0044.scaffold00158 992202 1 T C - ReadM INDEL 0044.scaffold00158 992275 1 . T - ReadM SNP 0044.scaffold00158 992348 1 T C - ReadM SNP 0044.scaffold00158 992857 1 A T - ReadM SNP 0044.scaffold00158 992927 1 A C - ReadM SNP 0044.scaffold00158 993282 1 A G - ScafM SNP 0044.scaffold00158 993625 1 G A scaffold9818 ReadM SNP 0044.scaffold00158 993947 1 C T - ReadM SNP 0044.scaffold00158 994019 1 T G - ReadM SNP 0044.scaffold00158 994134 1 C T - ReadM SNP 0044.scaffold00158 995931 1 T C - ReadM SNP 0044.scaffold00158 996118 1 C T - ReadM INDEL 0044.scaffold00158 996518 1 A . - ScafM SNP 0044.scaffold00158 997349 1 C T scaffold9818 ScafM SNP 0044.scaffold00158 997468 1 G T scaffold9818 ScafM SNP 0044.scaffold00158 997483 1 A T scaffold9818 ScafM SNP 0044.scaffold00158 997537 1 G A scaffold9818 ScafM SNP 0044.scaffold00158 997606 1 C A scaffold9818 ScafM SNP 0044.scaffold00158 997688 1 C A scaffold9818 ScafM INDEL 0045.scaffold00159 17960 5 CCAAA ..... scaffold2934 ScafM SNP 0045.scaffold00159 18435 2 TT GA scaffold2934 ReadM SNP 0045.scaffold00159 18776 1 T A - ScafM SNP 0045.scaffold00159 28342 1 C T scaffold2934 ScafM SNP 0045.scaffold00159 28957 1 C T scaffold2934 ScafM SNP 0045.scaffold00159 29017 1 G A scaffold2934 ScafM SNP 0045.scaffold00159 34682 1 G A scaffold7800 ScafM SNP 0045.scaffold00159 34728 1 C G scaffold7800 ScafM INDEL 0045.scaffold00159 48088 2 AT .. scaffold13521 ScafM SNP 0045.scaffold00159 48133 1 T G scaffold13521 ScafM SNP 0045.scaffold00159 48283 1 T C scaffold13521 ScafM SNP 0045.scaffold00159 55371 1 T G scaffold13521 ScafM SNP 0045.scaffold00159 55411 1 A G scaffold13521 ScafM SNP 0045.scaffold00159 55469 1 G A scaffold13521 ScafM SNP 0045.scaffold00159 55496 1 C T scaffold13521 ScafM SNP 0045.scaffold00159 55507 1 A G scaffold13521 ScafM INDEL 0045.scaffold00159 58355 9 ......... GAGAATATT scaffold63334 ScafM SNP 0045.scaffold00159 58371 1 G C scaffold63334 ScafM INDEL 0045.scaffold00159 58378 1 C . scaffold63334 ScafM SNP 0045.scaffold00159 58389 1 G T scaffold63334 ScafM INDEL 0045.scaffold00159 58457 2 .. TT scaffold63334 ScafM SNP 0045.scaffold00159 58561 1 T C scaffold63334 ScafM SNP 0045.scaffold00159 58600 1 G A scaffold63334 ScafM SNP 0045.scaffold00159 58619 1 A G scaffold63334 ScafM SNP 0045.scaffold00159 58627 1 G A scaffold63334 ScafM SNP 0045.scaffold00159 58674 1 A G scaffold63334 ScafM SNP 0045.scaffold00159 58701 1 T C scaffold63334 ScafM SNP 0045.scaffold00159 58836 1 C T scaffold63334 ScafM SNP 0045.scaffold00159 59459 1 T A C19661495 ScafM SNP 0045.scaffold00159 59521 1 A T C19661495 ScafM SNP 0045.scaffold00159 59526 1 C G C19661495 ScafM INDEL 0045.scaffold00159 59583 2 TC .. C19661495 ScafM SNP 0045.scaffold00159 59821 1 A G C19661495 ScafM SNP 0045.scaffold00159 60050 1 T A C19661495 ScafM SNP 0045.scaffold00159 60172 1 T C C19661495 ScafM SNP 0045.scaffold00159 60198 1 C T C19661495 ScafM SNP 0045.scaffold00159 60258 1 A C C19661495 ScafM SNP 0045.scaffold00159 61057 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 61064 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 61088 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 61124 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 61153 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61160 1 G T scaffold19197 ScafM SNP 0045.scaffold00159 61167 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 61171 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 61175 1 C T scaffold19197 ScafM INDEL 0045.scaffold00159 61183 1 A . scaffold19197 ScafM SNP 0045.scaffold00159 61188 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61215 1 A T scaffold19197 ScafM SNP 0045.scaffold00159 61241 1 T A scaffold19197 ScafM INDEL 0045.scaffold00159 61252 5 AGGTA ..... scaffold19197 ScafM SNP 0045.scaffold00159 61258 1 C G scaffold19197 ScafM SNP 0045.scaffold00159 61284 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61288 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61320 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 61322 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 61330 1 C A scaffold19197 ScafM INDEL 0045.scaffold00159 61338 1 . T scaffold19197 ScafM SNP 0045.scaffold00159 61406 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 61409 1 A C scaffold19197 ScafM SNP 0045.scaffold00159 61420 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 61424 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61451 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 61461 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 61614 1 G A scaffold19197 ScafM INDEL 0045.scaffold00159 61714 3 ... TGA scaffold19197 ScafM SNP 0045.scaffold00159 61715 1 C T scaffold19197 ScafM INDEL 0045.scaffold00159 61717 1 . G scaffold19197 ScafM SNP 0045.scaffold00159 61757 1 A T scaffold19197 ScafM SNP 0045.scaffold00159 61913 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 61916 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 62022 1 C G scaffold19197 ScafM SNP 0045.scaffold00159 62120 1 G T scaffold19197 ScafM SNP 0045.scaffold00159 62129 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 62141 1 A C scaffold19197 ScafM SNP 0045.scaffold00159 62167 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 62173 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 62217 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 62242 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 62276 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 62285 1 C A scaffold19197 ScafM SNP 0045.scaffold00159 62307 1 C A scaffold19197 ScafM SNP 0045.scaffold00159 62329 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 62425 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 62450 1 A G scaffold19197 ScafM INDEL 0045.scaffold00159 62490 38 ...................................... GAGTAGTCTAAGGTCATTCTCTAATATTGAACCTTTTC scaffold19197 ScafM SNP 0045.scaffold00159 62725 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 62731 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 62750 2 AT GC scaffold19197 ScafM SNP 0045.scaffold00159 62901 1 A C scaffold19197 ScafM INDEL 0045.scaffold00159 62913 10 TGTTTGAATT .......... scaffold19197 ScafM INDEL 0045.scaffold00159 62926 7 TAAGTGG ....... scaffold19197 ScafM SNP 0045.scaffold00159 63016 1 G T scaffold19197 ScafM SNP 0045.scaffold00159 63028 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 63181 1 C A scaffold19197 ScafM SNP 0045.scaffold00159 63258 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 63290 1 C G scaffold19197 ScafM SNP 0045.scaffold00159 63329 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 63371 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 63388 1 T G scaffold19197 ScafM SNP 0045.scaffold00159 63470 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 63472 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 63562 1 T G scaffold19197 ScafM SNP 0045.scaffold00159 63786 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 63810 1 A G scaffold19197 ScafM INDEL 0045.scaffold00159 64023 1 A . scaffold19197 ScafM SNP 0045.scaffold00159 64068 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 64098 1 G T scaffold19197 ScafM SNP 0045.scaffold00159 64190 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 64345 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 64353 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 64377 2 TT AC scaffold19197 ScafM SNP 0045.scaffold00159 64382 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 64425 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 64432 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 64434 1 C T scaffold19197 ScafM INDEL 0045.scaffold00159 64437 1 . G scaffold19197 ScafM SNP 0045.scaffold00159 64503 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 64543 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 64564 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 64574 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 64588 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 64671 2 GC AT scaffold19197 ScafM SNP 0045.scaffold00159 64763 2 TC GA scaffold19197 ScafM SNP 0045.scaffold00159 64809 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 64961 1 C T scaffold19197 ScafM SNP 0045.scaffold00159 65018 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 65117 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 65123 2 AC TT scaffold19197 ScafM SNP 0045.scaffold00159 65138 1 T G scaffold19197 ScafM SNP 0045.scaffold00159 65199 1 T A scaffold19197 ScafM SNP 0045.scaffold00159 65220 1 C G scaffold19197 ScafM SNP 0045.scaffold00159 65261 1 T C scaffold19197 ScafM INDEL 0045.scaffold00159 65312 1 . G scaffold19197 ScafM SNP 0045.scaffold00159 65345 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 65351 1 A G scaffold19197 ScafM SNP 0045.scaffold00159 65359 1 T G scaffold19197 ScafM INDEL 0045.scaffold00159 65384 7 ....... GGGCAAA scaffold19197 ScafM SNP 0045.scaffold00159 65391 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 65569 1 A C scaffold19197 ScafM SNP 0045.scaffold00159 65579 1 A C scaffold19197 ScafM INDEL 0045.scaffold00159 65604 1 . G scaffold19197 ScafM SNP 0045.scaffold00159 65616 1 G C scaffold19197 ScafM SNP 0045.scaffold00159 65651 2 AT TC scaffold19197 ScafM INDEL 0045.scaffold00159 65697 2 CA .. scaffold19197 ScafM SNP 0045.scaffold00159 65715 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 65760 1 A C scaffold19197 ScafM INDEL 0045.scaffold00159 65772 1 A . scaffold19197 ScafM INDEL 0045.scaffold00159 65775 1 A . scaffold19197 ScafM INDEL 0045.scaffold00159 65778 1 G . scaffold19197 ScafM INDEL 0045.scaffold00159 65965 1 . G scaffold19197 ScafM INDEL 0045.scaffold00159 66022 1 . T scaffold19197 ScafM SNP 0045.scaffold00159 66737 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 66798 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 66852 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 66856 1 T C scaffold19197 ScafM SNP 0045.scaffold00159 66914 1 C T scaffold19197 ScafM INDEL 0045.scaffold00159 66917 1 A . scaffold19197 ScafM SNP 0045.scaffold00159 66945 1 C A scaffold19197 ScafM SNP 0045.scaffold00159 66983 1 G A scaffold19197 ScafM SNP 0045.scaffold00159 76759 1 T C scaffold4085 ScafM SNP 0045.scaffold00159 91898 1 A T scaffold4085 ReadM INDEL 0045.scaffold00159 93624 1 T . - ScafM SNP 0045.scaffold00159 95115 1 C T scaffold4085 ScafM SNP 0045.scaffold00159 96924 1 A T scaffold21958 ScafM SNP 0045.scaffold00159 97044 1 T C scaffold21958 ScafM SNP 0045.scaffold00159 97441 1 T C scaffold21958 ScafM SNP 0045.scaffold00159 97649 1 T C scaffold21958 ScafM SNP 0045.scaffold00159 97787 1 A C scaffold21958 ScafM SNP 0045.scaffold00159 97985 1 C T scaffold21958 ScafM SNP 0045.scaffold00159 98036 1 C T scaffold21958 ScafM INDEL 0045.scaffold00159 98191 2 .. GG scaffold21958 ScafM INDEL 0045.scaffold00159 98192 1 . C scaffold21958 ScafM INDEL 0045.scaffold00159 98202 44 ............................................ CTCGAGGTGCCAGCTTGGAGGCAGTTGGGAAACGTTTAGCATCA scaffold21958 ScafM SNP 0045.scaffold00159 98270 1 C T scaffold21958 ScafM SNP 0045.scaffold00159 98594 1 C T scaffold21958 ScafM SNP 0045.scaffold00159 99106 1 G T scaffold21958 ScafM SNP 0045.scaffold00159 99208 1 G A scaffold21958 ScafM INDEL 0045.scaffold00159 108899 1 . T scaffold30426 ScafM SNP 0045.scaffold00159 112552 1 C A scaffold61615 ScafM SNP 0045.scaffold00159 112589 2 AC CA scaffold61615 ScafM SNP 0045.scaffold00159 112671 1 T C scaffold61615 ScafM SNP 0045.scaffold00159 112674 1 A T scaffold61615 ScafM SNP 0045.scaffold00159 112745 1 G A scaffold61615 ScafM SNP 0045.scaffold00159 112760 1 T C scaffold61615 ScafM SNP 0045.scaffold00159 112774 1 T C scaffold61615 ScafM SNP 0045.scaffold00159 112799 1 A G scaffold61615 ScafM SNP 0045.scaffold00159 112835 1 T C scaffold61615 ScafM SNP 0045.scaffold00159 116084 1 G T scaffold17367 ScafM SNP 0045.scaffold00159 116162 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 116297 1 C T scaffold17367 ScafM SNP 0045.scaffold00159 116609 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 116612 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 122840 1 C T scaffold17367 Both INDEL 0045.scaffold00159 130896 1 . A scaffold17367 ScafM SNP 0045.scaffold00159 133792 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 133801 1 T C scaffold17367 Both SNP 0045.scaffold00159 133858 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 134053 1 A G scaffold17367 ScafM SNP 0045.scaffold00159 134075 1 A G scaffold17367 ScafM SNP 0045.scaffold00159 134107 1 G A scaffold17367 ScafM SNP 0045.scaffold00159 134115 1 T G scaffold17367 ScafM SNP 0045.scaffold00159 134155 2 TT AC scaffold17367 Both SNP 0045.scaffold00159 134233 1 C T scaffold17367 Both SNP 0045.scaffold00159 134245 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 134272 1 G A scaffold17367 ScafM SNP 0045.scaffold00159 134280 1 T A scaffold17367 ScafM SNP 0045.scaffold00159 134290 1 T G scaffold17367 ScafM SNP 0045.scaffold00159 134293 1 G A scaffold17367 Both SNP 0045.scaffold00159 134314 1 A G scaffold17367 Both SNP 0045.scaffold00159 134389 1 T C scaffold17367 Both SNP 0045.scaffold00159 134394 1 C T scaffold17367 ScafM INDEL 0045.scaffold00159 134398 3 GAA ... scaffold17367 ScafM SNP 0045.scaffold00159 134406 1 A T scaffold17367 ScafM SNP 0045.scaffold00159 134422 1 A T scaffold17367 ScafM SNP 0045.scaffold00159 134425 1 A G scaffold17367 ScafM SNP 0045.scaffold00159 134473 1 A C scaffold17367 ScafM SNP 0045.scaffold00159 134497 1 A C scaffold17367 ScafM SNP 0045.scaffold00159 134539 1 C T scaffold17367 ScafM SNP 0045.scaffold00159 134563 2 GT AC scaffold17367 ReadM SNP 0045.scaffold00159 134564 1 T C - ScafM SNP 0045.scaffold00159 134613 1 T G scaffold17367 ScafM SNP 0045.scaffold00159 134675 1 G A scaffold17367 ScafM INDEL 0045.scaffold00159 134700 1 . T scaffold17367 ScafM SNP 0045.scaffold00159 134713 1 A C scaffold17367 ScafM INDEL 0045.scaffold00159 134760 1 . T scaffold17367 ScafM SNP 0045.scaffold00159 134799 1 C G scaffold17367 ScafM SNP 0045.scaffold00159 134805 1 A G scaffold17367 Both SNP 0045.scaffold00159 135894 1 C T scaffold17367 Both SNP 0045.scaffold00159 135917 1 T G scaffold17367 Both SNP 0045.scaffold00159 136024 1 A T scaffold17367 Both SNP 0045.scaffold00159 136050 1 C T scaffold17367 Both SNP 0045.scaffold00159 136094 1 A G scaffold17367 Both SNP 0045.scaffold00159 136140 1 A C scaffold17367 ScafM SNP 0045.scaffold00159 136163 1 G A scaffold17367 ReadM SNP 0045.scaffold00159 136239 1 C A - ReadM SNP 0045.scaffold00159 137372 1 C T - ReadM INDEL 0045.scaffold00159 137424 1 . A - ReadM SNP 0045.scaffold00159 137511 1 G A - ReadM SNP 0045.scaffold00159 137719 1 A G - ReadM SNP 0045.scaffold00159 138049 1 T C - ReadM SNP 0045.scaffold00159 138275 1 C A - ScafM SNP 0045.scaffold00159 148663 1 A G scaffold8955 ScafM INDEL 0045.scaffold00159 148708 2 .. CA scaffold8955 ScafM SNP 0045.scaffold00159 148729 1 G C scaffold8955 ScafM SNP 0045.scaffold00159 148735 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 148742 1 A C scaffold8955 ScafM SNP 0045.scaffold00159 148753 1 T A scaffold8955 ScafM SNP 0045.scaffold00159 148756 1 G T scaffold8955 ScafM SNP 0045.scaffold00159 148768 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 148809 1 T A scaffold8955 ScafM SNP 0045.scaffold00159 148822 1 T G scaffold8955 ScafM SNP 0045.scaffold00159 148834 1 A C scaffold8955 ScafM INDEL 0045.scaffold00159 148841 9 ......... CATCTCGAA scaffold8955 ScafM INDEL 0045.scaffold00159 148842 3 ... GTC scaffold8955 ScafM INDEL 0045.scaffold00159 148844 1 . G scaffold8955 ScafM INDEL 0045.scaffold00159 148846 8 ........ AATTTAAG scaffold8955 ScafM INDEL 0045.scaffold00159 148848 28 ............................ TGGTAATTTGGCTTGTCTTATTTAAGGT scaffold8955 ScafM INDEL 0045.scaffold00159 148851 7 ....... TTTGGTC scaffold8955 ScafM SNP 0045.scaffold00159 148905 1 G T scaffold8955 ScafM SNP 0045.scaffold00159 148914 1 T C scaffold8955 ScafM INDEL 0045.scaffold00159 148919 3 CTT ... scaffold8955 ScafM SNP 0045.scaffold00159 148925 1 G T scaffold8955 ScafM INDEL 0045.scaffold00159 148927 2 CC .. scaffold8955 ScafM SNP 0045.scaffold00159 148974 1 A C scaffold8955 ScafM SNP 0045.scaffold00159 149110 1 C G scaffold17367 ScafM SNP 0045.scaffold00159 149242 1 G T scaffold17367 ScafM SNP 0045.scaffold00159 149256 1 G T scaffold17367 ScafM SNP 0045.scaffold00159 177974 1 A G scaffold17367 ScafM SNP 0045.scaffold00159 177979 1 G T scaffold17367 ScafM SNP 0045.scaffold00159 178044 1 G A scaffold17367 ScafM SNP 0045.scaffold00159 178110 1 G C scaffold17367 ScafM INDEL 0045.scaffold00159 178114 5 CTTAG ..... scaffold17367 ScafM SNP 0045.scaffold00159 178123 1 G A scaffold17367 ScafM INDEL 0045.scaffold00159 178133 4 .... CTTT scaffold17367 ScafM SNP 0045.scaffold00159 178155 1 T C scaffold17367 ScafM SNP 0045.scaffold00159 178194 1 G T scaffold17367 ScafM SNP 0045.scaffold00159 178262 1 T A scaffold17367 ScafM INDEL 0045.scaffold00159 178429 1 A . scaffold17367 ScafM INDEL 0045.scaffold00159 178446 1 T . scaffold17367 ScafM SNP 0045.scaffold00159 178689 1 A T scaffold17367 ScafM SNP 0045.scaffold00159 178778 1 A T scaffold17367 ScafM SNP 0045.scaffold00159 180346 1 C T scaffold8955 ScafM SNP 0045.scaffold00159 180366 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 180420 1 T C scaffold8955 ScafM INDEL 0045.scaffold00159 180577 1 . G scaffold8955 ScafM INDEL 0045.scaffold00159 180609 17 ................. ACATTTGTTTTCTTTAC scaffold8955 ScafM SNP 0045.scaffold00159 180657 1 T A scaffold8955 ScafM SNP 0045.scaffold00159 180712 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 180717 2 TT AA scaffold8955 ScafM SNP 0045.scaffold00159 180722 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 180782 1 C T scaffold8955 ReadM INDEL 0045.scaffold00159 180824 1 . T - ScafM INDEL 0045.scaffold00159 180824 2 .. TA scaffold8955 ScafM SNP 0045.scaffold00159 180866 1 A G scaffold8955 Both SNP 0045.scaffold00159 181000 1 T A scaffold8955 ScafM SNP 0045.scaffold00159 181002 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 181017 1 C T scaffold8955 ScafM SNP 0045.scaffold00159 181019 1 C G scaffold8955 ScafM SNP 0045.scaffold00159 181047 1 G A scaffold8955 ScafM SNP 0045.scaffold00159 181081 1 A G scaffold8955 Both SNP 0045.scaffold00159 181086 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 181103 1 A G scaffold8955 ReadM SNP 0045.scaffold00159 181216 1 A G - ReadM SNP 0045.scaffold00159 181271 1 C T - ReadM SNP 0045.scaffold00159 181311 1 A G - ScafM INDEL 0045.scaffold00159 181485 2 .. AA scaffold8955 ScafM INDEL 0045.scaffold00159 181493 2 TG .. scaffold8955 ScafM SNP 0045.scaffold00159 181581 1 C T scaffold8955 ScafM SNP 0045.scaffold00159 181716 1 A G scaffold8955 ScafM SNP 0045.scaffold00159 181735 1 G C scaffold8955 ScafM SNP 0045.scaffold00159 181737 1 G A scaffold8955 ScafM SNP 0045.scaffold00159 181742 3 TTG CCA scaffold8955 ScafM SNP 0045.scaffold00159 181778 1 C T scaffold8955 ReadM SNP 0045.scaffold00159 181946 1 A C - ScafM INDEL 0045.scaffold00159 182033 3 AAA ... scaffold8955 ScafM SNP 0045.scaffold00159 182037 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 182041 1 C A scaffold8955 ScafM SNP 0045.scaffold00159 182045 1 A T scaffold8955 ScafM INDEL 0045.scaffold00159 182120 4 TGAA .... scaffold8955 ScafM INDEL 0045.scaffold00159 182363 2 TT .. scaffold8955 ScafM SNP 0045.scaffold00159 182388 1 T C scaffold8955 ReadM SNP 0045.scaffold00159 182575 1 G T - ScafM INDEL 0045.scaffold00159 182685 2 .. CT scaffold8955 ScafM INDEL 0045.scaffold00159 182686 1 . T scaffold8955 ScafM SNP 0045.scaffold00159 182689 1 C A scaffold8955 ScafM SNP 0045.scaffold00159 182692 1 A G scaffold8955 ScafM SNP 0045.scaffold00159 182697 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 182705 1 C T scaffold8955 ScafM SNP 0045.scaffold00159 182716 2 CG TA scaffold8955 ScafM SNP 0045.scaffold00159 182727 1 G A scaffold8955 ScafM SNP 0045.scaffold00159 182734 1 T A scaffold8955 ScafM SNP 0045.scaffold00159 182751 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 182762 1 A G scaffold8955 ScafM SNP 0045.scaffold00159 182765 1 A G scaffold8955 ScafM SNP 0045.scaffold00159 182776 1 G A scaffold8955 ScafM INDEL 0045.scaffold00159 182781 1 C . scaffold8955 ScafM INDEL 0045.scaffold00159 182784 1 A . scaffold8955 ScafM INDEL 0045.scaffold00159 182809 1 . C scaffold8955 ScafM SNP 0045.scaffold00159 182813 1 T C scaffold8955 ScafM SNP 0045.scaffold00159 182857 1 A T scaffold8955 ScafM SNP 0045.scaffold00159 183119 1 G A scaffold8955 ScafM INDEL 0045.scaffold00159 183249 2 .. TC scaffold8955 ScafM SNP 0045.scaffold00159 183282 1 A C scaffold8955 ScafM SNP 0045.scaffold00159 183293 1 A G scaffold8955 ScafM SNP 0045.scaffold00159 183325 1 G A scaffold8955 ScafM SNP 0045.scaffold00159 183328 1 G A scaffold8955 ScafM SNP 0045.scaffold00159 186000 1 A G scaffold38892 ScafM SNP 0045.scaffold00159 186036 2 TT AC scaffold38892 ScafM SNP 0045.scaffold00159 186092 1 T A scaffold38892 ScafM SNP 0045.scaffold00159 186122 1 A G scaffold38892 ScafM SNP 0045.scaffold00159 186133 2 TC CT scaffold38892 ScafM SNP 0045.scaffold00159 186156 1 G A scaffold38892 ReadM SNP 0045.scaffold00159 186428 1 G A - ReadM SNP 0045.scaffold00159 186641 1 T C - ReadM SNP 0045.scaffold00159 186720 1 G A - ReadM SNP 0045.scaffold00159 186787 1 C G - ReadM SNP 0045.scaffold00159 186891 1 A G - ReadM SNP 0045.scaffold00159 186909 1 T G - ReadM SNP 0045.scaffold00159 187237 1 A C - ReadM SNP 0045.scaffold00159 187381 1 T C - ScafM SNP 0045.scaffold00159 191336 1 G C scaffold1892 ScafM SNP 0045.scaffold00159 191361 1 G A scaffold1892 ScafM SNP 0045.scaffold00159 191417 1 G A scaffold1892 ScafM SNP 0045.scaffold00159 191548 1 A G scaffold1892 ScafM INDEL 0045.scaffold00159 191606 1 T . scaffold1892 ScafM SNP 0045.scaffold00159 191629 1 A T scaffold1892 ReadM SNP 0045.scaffold00159 191856 1 C G - ReadM INDEL 0045.scaffold00159 191872 1 A . - ReadM SNP 0045.scaffold00159 192792 1 T A - ReadM SNP 0045.scaffold00159 194321 1 C A - ReadM SNP 0045.scaffold00159 194436 1 C T - ReadM SNP 0045.scaffold00159 194533 1 T C - ReadM SNP 0045.scaffold00159 194755 1 G A - ScafM SNP 0045.scaffold00159 194847 1 C T scaffold52924 ScafM SNP 0045.scaffold00159 194958 1 T A scaffold52924 ScafM SNP 0045.scaffold00159 194961 1 A C scaffold52924 ReadM SNP 0045.scaffold00159 195013 1 T A - ScafM SNP 0045.scaffold00159 195833 1 C G scaffold29780 ScafM SNP 0045.scaffold00159 195899 1 C G scaffold29780 ScafM SNP 0045.scaffold00159 195913 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 195945 1 A G scaffold29780 ScafM INDEL 0045.scaffold00159 195977 28 ............................ TCGGCCCGTTTAGTTGGTTGGAGGCCCT scaffold29780 ScafM SNP 0045.scaffold00159 196011 1 T A scaffold29780 ScafM SNP 0045.scaffold00159 196432 1 T C scaffold29780 ScafM INDEL 0045.scaffold00159 196451 9 ......... CAAAACCAC scaffold29780 ScafM SNP 0045.scaffold00159 196542 1 A G scaffold29780 ScafM SNP 0045.scaffold00159 196551 1 G T scaffold29780 ScafM SNP 0045.scaffold00159 196574 1 A C scaffold29780 ScafM SNP 0045.scaffold00159 196579 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 196598 1 T G scaffold29780 ScafM SNP 0045.scaffold00159 196632 1 G A scaffold29780 ScafM SNP 0045.scaffold00159 196656 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 196731 1 T G scaffold29780 Both SNP 0045.scaffold00159 196797 1 T C scaffold29780 Both SNP 0045.scaffold00159 196854 1 G C scaffold29780 ScafM INDEL 0045.scaffold00159 196903 4 .... CGGA scaffold29780 ScafM SNP 0045.scaffold00159 196915 1 A G scaffold29780 ScafM INDEL 0045.scaffold00159 196923 5 GATTT ..... scaffold29780 ScafM SNP 0045.scaffold00159 196929 2 CC GG scaffold29780 ScafM INDEL 0045.scaffold00159 196933 1 . G scaffold29780 ScafM SNP 0045.scaffold00159 196939 1 A G scaffold29780 ScafM SNP 0045.scaffold00159 196943 1 C G scaffold29780 ScafM INDEL 0045.scaffold00159 196945 2 TA .. scaffold29780 ScafM SNP 0045.scaffold00159 197025 1 C T scaffold29780 ScafM INDEL 0045.scaffold00159 197028 3 ... TTT scaffold29780 ScafM SNP 0045.scaffold00159 197029 1 A T scaffold29780 ScafM SNP 0045.scaffold00159 197096 1 C T scaffold29780 ScafM SNP 0045.scaffold00159 197098 1 G A scaffold29780 ScafM INDEL 0045.scaffold00159 197109 1 A . scaffold29780 ScafM INDEL 0045.scaffold00159 197112 1 . G scaffold29780 ScafM SNP 0045.scaffold00159 197122 1 T C scaffold29780 ReadM SNP 0045.scaffold00159 197181 1 A G - ScafM SNP 0045.scaffold00159 197250 1 G T scaffold29780 ScafM SNP 0045.scaffold00159 197494 1 T C scaffold29780 ScafM INDEL 0045.scaffold00159 197539 3 ATA ... scaffold29780 ScafM SNP 0045.scaffold00159 198203 1 G A scaffold29780 ScafM SNP 0045.scaffold00159 198218 1 C T scaffold29780 ReadM SNP 0045.scaffold00159 198433 1 A C - ReadM SNP 0045.scaffold00159 198535 1 T C - ReadM SNP 0045.scaffold00159 198564 1 T A - Both SNP 0045.scaffold00159 198630 1 T G scaffold29780 ScafM SNP 0045.scaffold00159 198676 1 C A scaffold29780 Both SNP 0045.scaffold00159 198742 1 T C scaffold29780 Both SNP 0045.scaffold00159 198763 1 A C scaffold29780 ReadM SNP 0045.scaffold00159 199190 1 A G - ReadM SNP 0045.scaffold00159 199223 1 G A - ReadM INDEL 0045.scaffold00159 199411 1 T . - ReadM SNP 0045.scaffold00159 199869 1 C G - ReadM SNP 0045.scaffold00159 199991 1 G T - Both SNP 0045.scaffold00159 200108 1 A T scaffold29780 Both SNP 0045.scaffold00159 200460 1 A G scaffold29780 Both SNP 0045.scaffold00159 200465 1 G A scaffold29780 ScafM SNP 0045.scaffold00159 200500 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 200687 1 T C scaffold29780 Both SNP 0045.scaffold00159 200698 1 C T scaffold29780 ScafM INDEL 0045.scaffold00159 200746 1 . T scaffold29780 ScafM INDEL 0045.scaffold00159 200748 2 .C GA scaffold29780 ScafM SNP 0045.scaffold00159 200751 1 A T scaffold29780 ScafM SNP 0045.scaffold00159 200755 1 G A scaffold29780 ScafM INDEL 0045.scaffold00159 200758 1 A . scaffold29780 ScafM SNP 0045.scaffold00159 200814 1 T A scaffold29780 ScafM SNP 0045.scaffold00159 200823 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 200830 1 A G scaffold29780 ScafM SNP 0045.scaffold00159 200838 1 T C scaffold29780 ScafM SNP 0045.scaffold00159 200904 1 T G scaffold29780 ScafM SNP 0045.scaffold00159 200914 1 G A scaffold29780 ScafM SNP 0045.scaffold00159 200945 1 G A scaffold29780 Both SNP 0045.scaffold00159 200948 1 A G scaffold29780 ReadM SNP 0045.scaffold00159 201130 1 A T - ReadM SNP 0045.scaffold00159 201196 1 C T - ReadM SNP 0045.scaffold00159 201394 1 A C - Both SNP 0045.scaffold00159 201678 1 C T scaffold65237 Both SNP 0045.scaffold00159 201692 1 C A scaffold65237 ReadM SNP 0045.scaffold00159 201755 1 C A - ReadM SNP 0045.scaffold00159 202283 1 C T - ReadM SNP 0045.scaffold00159 204201 1 A G - ReadM INDEL 0045.scaffold00159 204464 1 A . - ScafM SNP 0045.scaffold00159 204753 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 204767 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 205097 1 C A scaffold21485 Both SNP 0045.scaffold00159 205108 1 A C scaffold21485 ReadM SNP 0045.scaffold00159 205267 1 G A - ReadM SNP 0045.scaffold00159 205729 1 T G - ReadM SNP 0045.scaffold00159 206560 1 A T - ReadM SNP 0045.scaffold00159 206648 1 A T - ScafM INDEL 0045.scaffold00159 206865 1 . T scaffold21485 ScafM SNP 0045.scaffold00159 206870 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 206897 1 T G scaffold21485 ReadM SNP 0045.scaffold00159 206970 1 G A - ReadM SNP 0045.scaffold00159 207092 1 G C - Both SNP 0045.scaffold00159 207213 1 T G scaffold21485 ScafM INDEL 0045.scaffold00159 207277 1 A . scaffold21485 ScafM INDEL 0045.scaffold00159 207340 7 CTGCACA ....... scaffold21485 ScafM SNP 0045.scaffold00159 207355 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 207473 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 207488 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 207494 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 207513 1 A C scaffold21485 ScafM INDEL 0045.scaffold00159 207565 3 ... TCA scaffold21485 ScafM SNP 0045.scaffold00159 207611 1 C A scaffold21485 ReadM SNP 0045.scaffold00159 207716 1 A G - ScafM SNP 0045.scaffold00159 207845 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 207854 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 207860 2 GA TT scaffold21485 ScafM SNP 0045.scaffold00159 207872 1 C A scaffold21485 Both SNP 0045.scaffold00159 207902 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 207914 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 207920 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 207930 1 A T scaffold21485 ScafM INDEL 0045.scaffold00159 207980 1 A . scaffold21485 ScafM SNP 0045.scaffold00159 207992 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 208023 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 208027 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 208033 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 208043 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 208089 1 T A scaffold21485 Both SNP 0045.scaffold00159 208195 1 C A scaffold21485 Both SNP 0045.scaffold00159 208202 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 208230 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 208236 1 T A scaffold21485 Both SNP 0045.scaffold00159 208294 1 T C scaffold21485 Both SNP 0045.scaffold00159 208302 1 T C scaffold21485 Both INDEL 0045.scaffold00159 208321 1 . T scaffold21485 Both SNP 0045.scaffold00159 208385 1 T C scaffold21485 Both SNP 0045.scaffold00159 208443 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 208499 1 G T scaffold21485 Both SNP 0045.scaffold00159 208545 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 208561 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 208566 2 AG .. scaffold21485 ScafM INDEL 0045.scaffold00159 208615 6 ...... AACCAT scaffold21485 ScafM SNP 0045.scaffold00159 208623 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 208625 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 208628 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 208633 2 GA AC scaffold21485 ScafM SNP 0045.scaffold00159 208637 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 208662 3 TTC ... scaffold21485 ScafM SNP 0045.scaffold00159 208674 2 TA CG scaffold21485 ScafM INDEL 0045.scaffold00159 208687 1 A . scaffold21485 ScafM SNP 0045.scaffold00159 208695 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 208706 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 208715 1 G A scaffold21485 ScafM INDEL 0045.scaffold00159 208721 1 A . scaffold21485 ScafM SNP 0045.scaffold00159 208737 1 C G scaffold21485 ScafM SNP 0045.scaffold00159 208748 1 G T scaffold21485 ScafM INDEL 0045.scaffold00159 208762 1 C . scaffold21485 ScafM SNP 0045.scaffold00159 208765 2 CA AG scaffold21485 ScafM INDEL 0045.scaffold00159 208770 1 . C scaffold21485 ScafM INDEL 0045.scaffold00159 208771 2 .. GT scaffold21485 ScafM SNP 0045.scaffold00159 208813 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 208836 1 C G scaffold21485 ScafM INDEL 0045.scaffold00159 208844 1 G . scaffold21485 ScafM SNP 0045.scaffold00159 208852 1 T G scaffold21485 ScafM SNP 0045.scaffold00159 208873 1 G T scaffold21485 ScafM SNP 0045.scaffold00159 208899 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 208919 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 208935 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 208950 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 208971 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 208976 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 208981 1 G T scaffold21485 ScafM INDEL 0045.scaffold00159 208993 2 GG .. scaffold21485 ScafM SNP 0045.scaffold00159 209000 1 G A scaffold21485 ScafM INDEL 0045.scaffold00159 209010 2 AG .. scaffold21485 ScafM INDEL 0045.scaffold00159 209016 1 C . scaffold21485 ScafM INDEL 0045.scaffold00159 209020 3 ATA ... scaffold21485 ScafM INDEL 0045.scaffold00159 209024 1 A . scaffold21485 ScafM SNP 0045.scaffold00159 209034 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 209057 1 . T scaffold21485 ReadM INDEL 0045.scaffold00159 209105 2 GA .. - ScafM INDEL 0045.scaffold00159 209108 21 AGATTTCTTTTCTTAAGAAAT ..................... scaffold21485 ScafM SNP 0045.scaffold00159 209150 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 209155 1 C T scaffold21485 ScafM INDEL 0045.scaffold00159 209175 3 ... ATC scaffold21485 ScafM SNP 0045.scaffold00159 209188 1 C T scaffold21485 Both SNP 0045.scaffold00159 209225 1 C G scaffold21485 Both SNP 0045.scaffold00159 209234 1 G A scaffold21485 Both SNP 0045.scaffold00159 209263 1 A T scaffold21485 ScafM INDEL 0045.scaffold00159 209302 4 .... GAAT scaffold21485 ScafM SNP 0045.scaffold00159 209307 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 209318 2 .. AA scaffold21485 ScafM INDEL 0045.scaffold00159 209319 1 . T scaffold21485 ScafM INDEL 0045.scaffold00159 209320 2 .. TC scaffold21485 ScafM INDEL 0045.scaffold00159 209322 3 ... GTC scaffold21485 ScafM INDEL 0045.scaffold00159 209324 1 . T scaffold21485 ScafM SNP 0045.scaffold00159 209346 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 209598 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 209607 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 209617 1 G A scaffold21485 Both SNP 0045.scaffold00159 209656 1 T C scaffold21485 Both SNP 0045.scaffold00159 209663 1 T C scaffold21485 Both SNP 0045.scaffold00159 209684 1 A G scaffold21485 Both SNP 0045.scaffold00159 209827 1 G A scaffold21485 Both SNP 0045.scaffold00159 209867 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 209924 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 209926 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 209930 1 A C scaffold21485 Both INDEL 0045.scaffold00159 209959 2 .. AA scaffold21485 ScafM INDEL 0045.scaffold00159 209993 7 CTCATAG ....... scaffold21485 ScafM INDEL 0045.scaffold00159 210001 1 C . scaffold21485 ScafM SNP 0045.scaffold00159 210041 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 210058 1 C T scaffold21485 ScafM INDEL 0045.scaffold00159 210098 3 AAA ... scaffold21485 ScafM INDEL 0045.scaffold00159 210105 2 TG .. scaffold21485 ScafM SNP 0045.scaffold00159 210145 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 210150 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 210188 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 210203 1 C T scaffold21485 Both SNP 0045.scaffold00159 210247 1 C T scaffold21485 Both SNP 0045.scaffold00159 210252 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 210274 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 210331 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 210338 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 210345 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 210361 1 T G scaffold21485 ScafM INDEL 0045.scaffold00159 210363 8 ........ TTAATCTT scaffold21485 ScafM INDEL 0045.scaffold00159 210364 1 . A scaffold21485 ScafM SNP 0045.scaffold00159 210378 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 210401 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 210451 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 210465 1 T G scaffold21485 ScafM SNP 0045.scaffold00159 210473 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 210478 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 210484 1 A G scaffold21485 ReadM SNP 0045.scaffold00159 210681 1 A C - ScafM SNP 0045.scaffold00159 210999 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 211029 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211038 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 211064 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 211066 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 211162 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 211168 1 A C scaffold21485 Both SNP 0045.scaffold00159 211195 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 211203 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211211 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 211227 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 211238 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211246 1 T A scaffold21485 ScafM INDEL 0045.scaffold00159 211249 1 A . scaffold21485 ScafM SNP 0045.scaffold00159 211255 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 211272 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 211278 1 G T scaffold21485 ScafM SNP 0045.scaffold00159 211280 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 211283 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 211307 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 211352 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211358 1 A C scaffold21485 Both SNP 0045.scaffold00159 211445 1 A G scaffold21485 Both SNP 0045.scaffold00159 211458 1 A G scaffold21485 Both SNP 0045.scaffold00159 211488 1 T C scaffold21485 Both SNP 0045.scaffold00159 211514 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 211615 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 211659 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 211663 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211668 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 211683 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 211689 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 211691 2 TA CG scaffold21485 ScafM SNP 0045.scaffold00159 211695 1 C T scaffold21485 Both SNP 0045.scaffold00159 211767 1 A G scaffold21485 ReadM SNP 0045.scaffold00159 211786 1 C T - ScafM INDEL 0045.scaffold00159 211791 2 GA .T scaffold21485 ScafM SNP 0045.scaffold00159 211806 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 211810 1 G T scaffold21485 ScafM SNP 0045.scaffold00159 211823 1 G C scaffold21485 ScafM SNP 0045.scaffold00159 211826 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 211836 2 AA GT scaffold21485 ScafM SNP 0045.scaffold00159 211871 1 T C scaffold21485 ScafM INDEL 0045.scaffold00159 211909 2 CT .. scaffold21485 ScafM INDEL 0045.scaffold00159 211912 5 ATCAC ..... scaffold21485 ScafM SNP 0045.scaffold00159 211927 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 211936 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 211938 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 211966 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 211994 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 211999 1 T C scaffold21485 Both SNP 0045.scaffold00159 212041 1 T C scaffold21485 ReadM SNP 0045.scaffold00159 212066 1 G A - ScafM SNP 0045.scaffold00159 212068 2 CC GT scaffold21485 ScafM SNP 0045.scaffold00159 212071 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212074 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 212076 1 C T scaffold21485 ScafM INDEL 0045.scaffold00159 212091 1 . C scaffold21485 Both SNP 0045.scaffold00159 212184 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 212210 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 212223 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212288 1 A G scaffold21485 Both SNP 0045.scaffold00159 212294 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 212299 1 T . scaffold21485 Both SNP 0045.scaffold00159 212340 1 A G scaffold21485 Both SNP 0045.scaffold00159 212371 1 G A scaffold21485 Both SNP 0045.scaffold00159 212377 1 T G scaffold21485 ScafM SNP 0045.scaffold00159 212416 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 212434 2 .. AT scaffold21485 ScafM SNP 0045.scaffold00159 212448 2 AA CT scaffold21485 ScafM SNP 0045.scaffold00159 212457 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 212505 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212509 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212517 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 212583 2 CA AC scaffold21485 ScafM SNP 0045.scaffold00159 212636 1 C T scaffold21485 ReadM SNP 0045.scaffold00159 212640 1 G A - ScafM SNP 0045.scaffold00159 212642 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 212648 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212652 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 212664 2 CA GG scaffold21485 ReadM SNP 0045.scaffold00159 212665 1 A G - ScafM SNP 0045.scaffold00159 212692 1 A G scaffold21485 Both SNP 0045.scaffold00159 212781 1 C G scaffold21485 ScafM SNP 0045.scaffold00159 212805 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212812 1 C T scaffold21485 Both SNP 0045.scaffold00159 212881 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212946 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 212949 1 C G scaffold21485 ScafM SNP 0045.scaffold00159 212958 1 G T scaffold21485 ScafM SNP 0045.scaffold00159 212972 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 212976 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 212985 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 212996 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 213001 1 G A scaffold21485 ScafM SNP 0045.scaffold00159 213017 1 G A scaffold21485 Both SNP 0045.scaffold00159 213046 1 T G scaffold21485 ScafM SNP 0045.scaffold00159 213048 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 213081 2 CT AA scaffold21485 ScafM SNP 0045.scaffold00159 213088 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 213102 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 213107 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 213125 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 213139 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 213142 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 213163 1 C T scaffold21485 ScafM INDEL 0045.scaffold00159 213182 1 . C scaffold21485 Both SNP 0045.scaffold00159 213208 1 G C scaffold21485 Both SNP 0045.scaffold00159 213222 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 213243 2 CC TG scaffold21485 ScafM SNP 0045.scaffold00159 213247 1 C A scaffold21485 ScafM SNP 0045.scaffold00159 213270 1 T A scaffold21485 ScafM SNP 0045.scaffold00159 213273 1 C T scaffold21485 ScafM SNP 0045.scaffold00159 213326 1 C T scaffold21485 ScafM INDEL 0045.scaffold00159 213368 1 A . scaffold21485 ScafM INDEL 0045.scaffold00159 213386 7 AAAAAAA ....... scaffold21485 ScafM SNP 0045.scaffold00159 213398 1 T C scaffold21485 ScafM SNP 0045.scaffold00159 213408 1 G A scaffold21485 Both SNP 0045.scaffold00159 213478 1 G T scaffold21485 Both SNP 0045.scaffold00159 213491 1 A C scaffold21485 ScafM SNP 0045.scaffold00159 213541 1 A G scaffold21485 ScafM SNP 0045.scaffold00159 213543 1 A G scaffold21485 Both SNP 0045.scaffold00159 213556 1 G A scaffold21485 Both SNP 0045.scaffold00159 213620 1 T C scaffold21485 Both SNP 0045.scaffold00159 213669 1 T C scaffold21485 Both SNP 0045.scaffold00159 213813 1 G C scaffold21485 Both SNP 0045.scaffold00159 213827 1 A C scaffold21485 Both SNP 0045.scaffold00159 213945 1 A G scaffold21485 ScafM INDEL 0045.scaffold00159 214049 1 . A scaffold21485 ScafM INDEL 0045.scaffold00159 214098 31 ............................... TCTTGTCAAAAAAAAAAAAGAAAATCTAAGC scaffold21485 Both SNP 0045.scaffold00159 214289 1 T C scaffold21485 ScafM INDEL 0045.scaffold00159 214337 5 ..... AAAAA scaffold21485 ScafM SNP 0045.scaffold00159 216099 1 A T scaffold21485 ScafM SNP 0045.scaffold00159 217239 1 G A scaffold21485 ReadM SNP 0045.scaffold00159 218019 1 A T - ReadM SNP 0045.scaffold00159 220984 1 T G - ReadM SNP 0045.scaffold00159 221980 1 T A - ReadM SNP 0045.scaffold00159 222409 1 C T - ReadM SNP 0045.scaffold00159 223925 1 T A - ReadM INDEL 0045.scaffold00159 224491 1 . T - ReadM SNP 0045.scaffold00159 225382 1 T G - ScafM SNP 0045.scaffold00159 229598 1 T C scaffold10848 ScafM SNP 0045.scaffold00159 229789 1 G T scaffold10848 ScafM SNP 0045.scaffold00159 229795 1 C T scaffold10848 ScafM SNP 0045.scaffold00159 229909 1 C T scaffold10848 Both SNP 0045.scaffold00159 230080 1 T C scaffold10848 ScafM SNP 0045.scaffold00159 231066 1 T A scaffold10848 ScafM SNP 0045.scaffold00159 231120 1 A C scaffold10848 ScafM SNP 0045.scaffold00159 231248 1 G A scaffold10848 ScafM SNP 0045.scaffold00159 231330 1 T C scaffold10848 ScafM SNP 0045.scaffold00159 231349 1 C T scaffold10848 ScafM INDEL 0045.scaffold00159 231374 1 . A scaffold10848 ScafM SNP 0045.scaffold00159 231823 1 G A scaffold10848 ScafM INDEL 0045.scaffold00159 231919 1 A . scaffold10848 ScafM SNP 0045.scaffold00159 231963 1 C G scaffold10848 ScafM SNP 0045.scaffold00159 232039 1 T A scaffold10848 ScafM SNP 0045.scaffold00159 232049 1 A G scaffold10848 ScafM SNP 0045.scaffold00159 232083 1 A G scaffold10848 ScafM SNP 0045.scaffold00159 232182 1 C T scaffold10848 ScafM SNP 0045.scaffold00159 232286 1 G A scaffold10848 ScafM SNP 0045.scaffold00159 232365 1 C T scaffold10848 ScafM SNP 0045.scaffold00159 232432 1 A T scaffold10848 ScafM SNP 0045.scaffold00159 232752 1 C A scaffold34224 ScafM SNP 0045.scaffold00159 232757 2 CA TC scaffold34224 ScafM SNP 0045.scaffold00159 232762 1 A G scaffold34224 ScafM SNP 0045.scaffold00159 232817 1 C T scaffold34224 ScafM SNP 0045.scaffold00159 232820 1 C T scaffold34224 ScafM SNP 0045.scaffold00159 233603 1 A G scaffold30183 ScafM INDEL 0045.scaffold00159 233630 5 GCATT ..... scaffold30183 ScafM SNP 0045.scaffold00159 233644 1 C T scaffold30183 ScafM SNP 0045.scaffold00159 233688 1 A C scaffold30183 ScafM SNP 0045.scaffold00159 233691 1 G A scaffold30183 ScafM INDEL 0045.scaffold00159 233703 1 . C scaffold30183 ScafM SNP 0045.scaffold00159 235312 1 T G scaffold57280 ScafM SNP 0045.scaffold00159 235387 1 G A scaffold57280 ScafM SNP 0045.scaffold00159 235553 1 A C scaffold57280 ScafM SNP 0045.scaffold00159 236132 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236137 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236143 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236151 2 TC CT scaffold16756 ScafM SNP 0045.scaffold00159 236155 1 T G scaffold16756 ScafM SNP 0045.scaffold00159 236157 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236167 3 ATC GCT scaffold16756 ScafM SNP 0045.scaffold00159 236172 2 TC CT scaffold16756 ScafM SNP 0045.scaffold00159 236176 1 G C scaffold16756 ScafM SNP 0045.scaffold00159 236181 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236191 1 C A scaffold16756 ScafM SNP 0045.scaffold00159 236202 1 A C scaffold16756 ScafM SNP 0045.scaffold00159 236210 1 A C scaffold16756 ScafM SNP 0045.scaffold00159 236214 1 G C scaffold16756 ScafM SNP 0045.scaffold00159 236216 1 C G scaffold16756 ScafM INDEL 0045.scaffold00159 236218 1 . T scaffold16756 ScafM INDEL 0045.scaffold00159 236221 1 A . scaffold16756 ScafM SNP 0045.scaffold00159 236224 1 A T scaffold16756 ScafM SNP 0045.scaffold00159 236231 1 G C scaffold16756 ScafM SNP 0045.scaffold00159 236243 1 T G scaffold16756 ScafM SNP 0045.scaffold00159 236246 1 T G scaffold16756 ScafM SNP 0045.scaffold00159 236248 1 G C scaffold16756 ScafM SNP 0045.scaffold00159 236251 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236255 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236260 2 AT CC scaffold16756 ScafM SNP 0045.scaffold00159 236264 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236266 2 GG CT scaffold16756 ScafM SNP 0045.scaffold00159 236272 1 C A scaffold16756 ScafM SNP 0045.scaffold00159 236276 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236288 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236300 1 A C scaffold16756 ScafM SNP 0045.scaffold00159 236306 1 T A scaffold16756 ScafM SNP 0045.scaffold00159 236309 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236315 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236321 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236331 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236351 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236356 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236384 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236404 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236429 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236432 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236435 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236441 1 T G scaffold16756 ScafM SNP 0045.scaffold00159 236444 1 A T scaffold16756 ScafM SNP 0045.scaffold00159 236447 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236452 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236456 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236459 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236463 1 A G scaffold16756 ScafM INDEL 0045.scaffold00159 236468 1 C . scaffold16756 ScafM INDEL 0045.scaffold00159 236473 1 . C scaffold16756 ScafM SNP 0045.scaffold00159 236481 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236489 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236495 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236498 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236501 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236507 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236510 1 C A scaffold16756 ScafM SNP 0045.scaffold00159 236519 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236522 1 T A scaffold16756 ScafM SNP 0045.scaffold00159 236540 1 A G scaffold16756 ScafM SNP 0045.scaffold00159 236546 1 T A scaffold16756 ScafM SNP 0045.scaffold00159 236558 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236567 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236570 1 C T scaffold16756 ScafM SNP 0045.scaffold00159 236581 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236586 1 T C scaffold16756 ScafM SNP 0045.scaffold00159 236590 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236593 4 CCCC TTGA scaffold16756 ScafM SNP 0045.scaffold00159 236609 1 G A scaffold16756 ScafM SNP 0045.scaffold00159 236615 1 G T scaffold16756 ScafM SNP 0045.scaffold00159 236625 2 AG CA scaffold16756 ScafM SNP 0045.scaffold00159 236636 1 C G scaffold16756 ScafM INDEL 0045.scaffold00159 236640 1 A . scaffold16756 ScafM INDEL 0045.scaffold00159 236643 1 . T scaffold16756 ScafM SNP 0045.scaffold00159 236647 2 GA TG scaffold16756 ScafM SNP 0045.scaffold00159 236657 1 G A scaffold16756 ReadM SNP 0045.scaffold00159 237040 1 A T - ScafM SNP 0045.scaffold00159 237260 1 T A scaffold16471 Both SNP 0045.scaffold00159 237394 1 A G scaffold16471 Both SNP 0045.scaffold00159 237478 1 G A scaffold16471 ScafM SNP 0045.scaffold00159 238753 1 T A scaffold16471 ScafM SNP 0045.scaffold00159 239125 1 G A scaffold16471 ReadM SNP 0045.scaffold00159 241943 1 G A - ReadM SNP 0045.scaffold00159 242148 1 A G - ReadM SNP 0045.scaffold00159 242488 1 A G - ScafM INDEL 0045.scaffold00159 247918 1 T . scaffold29558 ScafM SNP 0045.scaffold00159 247925 1 T G scaffold29558 ScafM INDEL 0045.scaffold00159 247940 1 T . scaffold29558 ScafM INDEL 0045.scaffold00159 247943 2 .A TC scaffold29558 ScafM INDEL 0045.scaffold00159 247976 1 G . scaffold29558 ScafM SNP 0045.scaffold00159 247983 1 G A scaffold29558 ScafM SNP 0045.scaffold00159 248320 1 G T scaffold31246 ScafM SNP 0045.scaffold00159 248334 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 248342 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 248354 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 248356 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 248441 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 248495 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 248660 1 T C scaffold31246 ScafM SNP 0045.scaffold00159 248826 1 C G scaffold31246 ScafM SNP 0045.scaffold00159 248867 1 T A scaffold31246 ScafM INDEL 0045.scaffold00159 248878 3 ATT ... scaffold31246 ScafM SNP 0045.scaffold00159 248919 1 C T scaffold31246 ScafM INDEL 0045.scaffold00159 248971 1 A . scaffold31246 ScafM INDEL 0045.scaffold00159 249010 4 .... TGCT scaffold31246 ScafM SNP 0045.scaffold00159 249011 1 A T scaffold31246 ScafM SNP 0045.scaffold00159 249014 1 T G scaffold31246 ScafM SNP 0045.scaffold00159 249037 1 C T scaffold31246 ScafM INDEL 0045.scaffold00159 249053 1 . C scaffold31246 ScafM INDEL 0045.scaffold00159 249062 4 .... ATGT scaffold31246 ScafM SNP 0045.scaffold00159 249113 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 249116 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 249604 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 249747 1 G A scaffold31246 ScafM INDEL 0045.scaffold00159 249792 1 . T scaffold31246 ScafM INDEL 0045.scaffold00159 249800 9 ......... TGTTTTTGA scaffold31246 ScafM INDEL 0045.scaffold00159 249802 1 . C scaffold31246 ScafM INDEL 0045.scaffold00159 249803 2 .. GA scaffold31246 ScafM INDEL 0045.scaffold00159 249805 8 ........ GAAACAGA scaffold31246 ScafM INDEL 0045.scaffold00159 249850 2 .C GA scaffold31246 ScafM SNP 0045.scaffold00159 249910 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 250087 1 A T scaffold31246 ScafM SNP 0045.scaffold00159 250103 1 G T scaffold31246 ScafM SNP 0045.scaffold00159 250131 1 C G scaffold31246 ScafM SNP 0045.scaffold00159 250140 1 C A scaffold31246 ScafM INDEL 0045.scaffold00159 250164 2 .. GT scaffold31246 ScafM SNP 0045.scaffold00159 251286 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 251404 1 A T scaffold9604 ScafM SNP 0045.scaffold00159 251446 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 251464 1 C G scaffold9604 ScafM SNP 0045.scaffold00159 251485 1 T A scaffold9604 ReadM SNP 0045.scaffold00159 252569 1 G A - ReadM SNP 0045.scaffold00159 252594 1 T A - ScafM SNP 0045.scaffold00159 252788 1 G A scaffold21476 ScafM SNP 0045.scaffold00159 253087 1 G A scaffold21476 ScafM SNP 0045.scaffold00159 253156 1 A T scaffold21476 ScafM SNP 0045.scaffold00159 253276 1 T C scaffold21476 ScafM SNP 0045.scaffold00159 256612 1 T A scaffold10472 ScafM SNP 0045.scaffold00159 256647 1 C A scaffold10472 ScafM SNP 0045.scaffold00159 256654 1 T A scaffold10472 ScafM SNP 0045.scaffold00159 256676 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 256696 2 GA TT scaffold10472 ScafM SNP 0045.scaffold00159 256721 1 A T scaffold10472 ScafM SNP 0045.scaffold00159 256732 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 256750 1 T C scaffold10472 ScafM SNP 0045.scaffold00159 256770 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 256772 1 C T scaffold10472 ScafM SNP 0045.scaffold00159 256821 1 C A scaffold10472 ScafM SNP 0045.scaffold00159 256838 1 G T scaffold10472 ScafM SNP 0045.scaffold00159 256848 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 256877 1 C G scaffold10472 ScafM SNP 0045.scaffold00159 256879 1 T G scaffold10472 ScafM SNP 0045.scaffold00159 256922 1 A G scaffold10472 ScafM SNP 0045.scaffold00159 256942 1 T G scaffold10472 ScafM SNP 0045.scaffold00159 256945 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 256970 1 A C scaffold10472 ScafM INDEL 0045.scaffold00159 256989 1 T . scaffold10472 ScafM SNP 0045.scaffold00159 256993 1 T C scaffold10472 ScafM SNP 0045.scaffold00159 257000 1 G T scaffold10472 ScafM INDEL 0045.scaffold00159 257015 1 A . scaffold10472 ScafM SNP 0045.scaffold00159 257019 1 T C scaffold10472 ScafM SNP 0045.scaffold00159 257040 1 T G scaffold10472 ScafM SNP 0045.scaffold00159 257047 1 A G scaffold10472 ScafM SNP 0045.scaffold00159 257110 1 C G scaffold10472 ScafM SNP 0045.scaffold00159 257120 1 G T scaffold10472 ScafM SNP 0045.scaffold00159 257164 2 CG AA scaffold10472 ScafM SNP 0045.scaffold00159 257180 1 T G scaffold10472 ScafM SNP 0045.scaffold00159 257202 1 G A scaffold10472 ScafM INDEL 0045.scaffold00159 257232 5 AAAAA ..... scaffold10472 ScafM INDEL 0045.scaffold00159 257238 2 GA .. scaffold10472 ScafM INDEL 0045.scaffold00159 257259 14 .............. CATATATATACTCA scaffold10472 ScafM SNP 0045.scaffold00159 257277 1 T A scaffold10472 ScafM SNP 0045.scaffold00159 257286 1 C T scaffold10472 ScafM SNP 0045.scaffold00159 257292 1 C G scaffold10472 ScafM INDEL 0045.scaffold00159 257303 1 T . scaffold10472 ScafM INDEL 0045.scaffold00159 257311 7 TGAATCG ....... scaffold10472 ScafM SNP 0045.scaffold00159 257326 1 A G scaffold10472 ScafM SNP 0045.scaffold00159 257333 1 G A scaffold10472 ScafM SNP 0045.scaffold00159 257347 1 C A scaffold10472 ScafM SNP 0045.scaffold00159 257352 1 A C scaffold10472 ScafM SNP 0045.scaffold00159 257370 1 A T scaffold10472 ScafM SNP 0045.scaffold00159 257420 1 T C scaffold10472 ScafM SNP 0045.scaffold00159 257449 1 C T scaffold10472 ScafM INDEL 0045.scaffold00159 257459 1 . G scaffold10472 ScafM SNP 0045.scaffold00159 257476 1 G C scaffold10472 ScafM SNP 0045.scaffold00159 257491 1 A G scaffold10472 ScafM SNP 0045.scaffold00159 257493 1 T C scaffold10472 ScafM SNP 0045.scaffold00159 257525 1 T A scaffold10472 ScafM SNP 0045.scaffold00159 257540 1 A G scaffold10472 ScafM SNP 0045.scaffold00159 257585 1 C T scaffold10472 ScafM SNP 0045.scaffold00159 257600 1 C T scaffold10472 ScafM SNP 0045.scaffold00159 257612 1 G T scaffold10472 ScafM SNP 0045.scaffold00159 258250 1 T G scaffold56155 ScafM SNP 0045.scaffold00159 258252 1 A G scaffold56155 ScafM SNP 0045.scaffold00159 258281 1 T G scaffold56155 ScafM SNP 0045.scaffold00159 258860 1 G T scaffold56155 ScafM SNP 0045.scaffold00159 259029 1 A C scaffold56155 ReadM SNP 0045.scaffold00159 261011 1 T G - ScafM SNP 0045.scaffold00159 262458 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 262491 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 262498 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 262511 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 262584 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 262602 1 G T scaffold9604 ScafM SNP 0045.scaffold00159 262623 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 262625 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 262648 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 262657 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 262672 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 262675 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 262685 1 T C scaffold9604 ScafM INDEL 0045.scaffold00159 262692 2 TC .A scaffold9604 ScafM INDEL 0045.scaffold00159 262697 4 ATAT ...C scaffold9604 ScafM INDEL 0045.scaffold00159 262706 1 T . scaffold9604 ScafM INDEL 0045.scaffold00159 262708 2 CG .. scaffold9604 ScafM INDEL 0045.scaffold00159 262712 4 CATC .... scaffold9604 ScafM SNP 0045.scaffold00159 262718 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 262720 4 TGAA GCCC scaffold9604 ScafM SNP 0045.scaffold00159 262726 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 262728 1 T G scaffold9604 ScafM INDEL 0045.scaffold00159 262730 1 G . scaffold9604 ScafM INDEL 0045.scaffold00159 262735 1 A . scaffold9604 ScafM INDEL 0045.scaffold00159 262737 5 AAAAA ....G scaffold9604 ScafM INDEL 0045.scaffold00159 262743 1 G . scaffold9604 ScafM SNP 0045.scaffold00159 262748 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 262759 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 262771 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 262833 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 262869 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 262891 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 262893 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 262915 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 262950 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 262956 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 262971 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 263003 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 263043 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 263050 1 A G scaffold9604 ScafM INDEL 0045.scaffold00159 263055 3 ATT ... scaffold9604 ScafM SNP 0045.scaffold00159 263063 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 263075 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 263130 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 263473 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 263717 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 263734 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 263770 2 AC GT scaffold9604 ScafM SNP 0045.scaffold00159 263798 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 263920 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 263958 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 263983 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 264009 1 C G scaffold9604 ScafM SNP 0045.scaffold00159 264024 2 CC AG scaffold9604 ScafM SNP 0045.scaffold00159 264053 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 264072 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 264087 1 G A scaffold9604 ScafM INDEL 0045.scaffold00159 264092 1 A . scaffold9604 ScafM INDEL 0045.scaffold00159 264110 1 G . scaffold9604 ScafM SNP 0045.scaffold00159 264117 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 264146 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 264169 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 264185 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 264204 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 264206 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 264225 1 A T scaffold9604 ScafM SNP 0045.scaffold00159 264230 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 264248 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 264272 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 264292 1 G T scaffold9604 ScafM SNP 0045.scaffold00159 264359 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 264395 1 C G scaffold9604 ScafM SNP 0045.scaffold00159 264415 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 264457 1 G T scaffold9604 ScafM INDEL 0045.scaffold00159 264530 2 TA .. scaffold9604 ScafM SNP 0045.scaffold00159 264575 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 264577 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 264692 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 264896 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 264902 1 G C scaffold9604 ScafM INDEL 0045.scaffold00159 264963 1 . G scaffold9604 ScafM SNP 0045.scaffold00159 265027 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 265036 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 265043 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 265080 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 265084 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 265095 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 265097 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 265571 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 265581 1 G T scaffold9604 ScafM SNP 0045.scaffold00159 265596 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 265695 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 265721 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 266304 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 266473 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 266582 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 266587 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 266635 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 266687 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 266722 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 266725 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 266729 2 CT TC scaffold9604 ScafM INDEL 0045.scaffold00159 266735 6 GATATA .....C scaffold9604 ScafM SNP 0045.scaffold00159 266744 1 G C scaffold9604 ScafM INDEL 0045.scaffold00159 266746 1 C . scaffold9604 ScafM SNP 0045.scaffold00159 266798 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 266854 1 A G scaffold9604 ScafM INDEL 0045.scaffold00159 266873 27 ........................... GTTTTATACTGCCAAATAGGTTTGCCA scaffold9604 ScafM SNP 0045.scaffold00159 266883 1 T A scaffold9604 ScafM INDEL 0045.scaffold00159 266906 1 A . scaffold9604 ScafM SNP 0045.scaffold00159 266969 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267008 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267078 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267088 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 267091 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 267105 1 C T scaffold9604 Both SNP 0045.scaffold00159 267163 1 T C scaffold9604 Both INDEL 0045.scaffold00159 267223 1 . A scaffold9604 ScafM SNP 0045.scaffold00159 267233 1 G A scaffold9604 ScafM INDEL 0045.scaffold00159 267236 2 AA .T scaffold9604 ScafM SNP 0045.scaffold00159 267259 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 267290 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267301 1 C A scaffold9604 ScafM SNP 0045.scaffold00159 267313 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 267351 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267355 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 267376 1 C G scaffold9604 ScafM SNP 0045.scaffold00159 267379 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 267464 1 T G scaffold9604 ScafM INDEL 0045.scaffold00159 267493 1 . C scaffold9604 ScafM SNP 0045.scaffold00159 267563 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 267569 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 267582 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 268600 1 C T scaffold586 ScafM SNP 0045.scaffold00159 268632 1 T G scaffold586 ScafM SNP 0045.scaffold00159 268636 1 G T scaffold586 ScafM INDEL 0045.scaffold00159 270488 27 ........................... TTTATGGGAAATACATGTTGATACATG scaffold41300 ScafM SNP 0045.scaffold00159 270512 1 C T scaffold41300 ScafM SNP 0045.scaffold00159 270549 1 A T scaffold41300 ScafM SNP 0045.scaffold00159 270648 1 A G scaffold41300 ScafM SNP 0045.scaffold00159 270734 1 C T scaffold41300 ScafM SNP 0045.scaffold00159 270843 1 C A scaffold41300 ScafM SNP 0045.scaffold00159 270901 1 A G scaffold41300 ScafM SNP 0045.scaffold00159 270924 1 G A scaffold41300 ScafM SNP 0045.scaffold00159 270948 1 T G scaffold41300 ScafM SNP 0045.scaffold00159 270962 1 C G scaffold41300 ScafM SNP 0045.scaffold00159 270970 1 C T scaffold41300 ScafM SNP 0045.scaffold00159 270983 1 A G scaffold41300 ScafM SNP 0045.scaffold00159 271008 1 G A scaffold41300 ScafM SNP 0045.scaffold00159 271027 1 G T scaffold41300 ScafM SNP 0045.scaffold00159 271033 1 G A scaffold41300 ScafM SNP 0045.scaffold00159 271065 1 C A scaffold41300 ScafM SNP 0045.scaffold00159 271096 1 T C scaffold41300 ScafM SNP 0045.scaffold00159 271103 1 T G scaffold41300 ScafM INDEL 0045.scaffold00159 271195 1 A . scaffold41300 ScafM SNP 0045.scaffold00159 271511 1 C T scaffold49574 ScafM SNP 0045.scaffold00159 271515 1 C T scaffold49574 ScafM SNP 0045.scaffold00159 271526 1 T A scaffold49574 ScafM SNP 0045.scaffold00159 271537 1 G A scaffold49574 ScafM INDEL 0045.scaffold00159 271546 1 . C scaffold49574 ScafM SNP 0045.scaffold00159 271590 1 T A scaffold49574 ScafM SNP 0045.scaffold00159 271651 1 G T scaffold49574 ScafM SNP 0045.scaffold00159 271675 1 C G scaffold49574 ScafM SNP 0045.scaffold00159 271679 1 T A scaffold49574 ScafM SNP 0045.scaffold00159 271684 1 C T scaffold49574 ScafM INDEL 0045.scaffold00159 271745 1 C . scaffold49574 ScafM SNP 0045.scaffold00159 271795 1 A C scaffold49574 ScafM SNP 0045.scaffold00159 271815 1 G A scaffold49574 ScafM SNP 0045.scaffold00159 271864 1 C A scaffold49574 ScafM SNP 0045.scaffold00159 271879 1 G T scaffold49574 ScafM SNP 0045.scaffold00159 271971 1 G T scaffold49574 ScafM SNP 0045.scaffold00159 272042 1 A C scaffold49574 ScafM SNP 0045.scaffold00159 272075 1 T C scaffold49574 ScafM SNP 0045.scaffold00159 272139 1 C G scaffold49574 ScafM SNP 0045.scaffold00159 272141 1 G A scaffold49574 ScafM SNP 0045.scaffold00159 272150 1 A G scaffold49574 ScafM SNP 0045.scaffold00159 272155 1 A G scaffold49574 ScafM SNP 0045.scaffold00159 272165 1 T G scaffold49574 ScafM SNP 0045.scaffold00159 272251 1 G A scaffold49574 Both INDEL 0045.scaffold00159 272306 1 A . scaffold49574 ScafM INDEL 0045.scaffold00159 272363 19 ................... GCCATATGATCATGCAAAA scaffold49574 ScafM SNP 0045.scaffold00159 272417 1 T A scaffold49574 ScafM SNP 0045.scaffold00159 298600 1 C A scaffold29928 ScafM SNP 0045.scaffold00159 298673 1 T G scaffold29928 ScafM SNP 0045.scaffold00159 298722 1 C T scaffold29928 ReadM SNP 0045.scaffold00159 300050 1 T C - ReadM SNP 0045.scaffold00159 301137 1 C G - ScafM INDEL 0045.scaffold00159 310400 1 . T scaffold3744 ScafM SNP 0045.scaffold00159 310404 1 C T scaffold3744 ScafM SNP 0045.scaffold00159 310421 1 G A scaffold3744 ScafM SNP 0045.scaffold00159 310430 1 C T scaffold3744 ScafM SNP 0045.scaffold00159 310476 2 TA CG scaffold3744 Both INDEL 0045.scaffold00159 310486 1 A . scaffold3744 ScafM SNP 0045.scaffold00159 310490 1 T G scaffold3744 ScafM SNP 0045.scaffold00159 310513 1 C T scaffold3744 ScafM SNP 0045.scaffold00159 310557 1 G A scaffold3744 ScafM SNP 0045.scaffold00159 310580 1 A C scaffold3744 ScafM SNP 0045.scaffold00159 310595 1 C A scaffold3744 ScafM INDEL 0045.scaffold00159 310604 3 TCT ... scaffold3744 ScafM INDEL 0045.scaffold00159 310608 1 T . scaffold3744 ScafM SNP 0045.scaffold00159 313354 1 G T scaffold70323 ScafM SNP 0045.scaffold00159 313373 1 T G scaffold70323 ScafM SNP 0045.scaffold00159 313426 1 G T scaffold70323 ScafM SNP 0045.scaffold00159 313454 1 A T scaffold70323 ScafM INDEL 0045.scaffold00159 313554 1 T . scaffold70323 ScafM SNP 0045.scaffold00159 313612 1 T A scaffold70323 ReadM SNP 0045.scaffold00159 315538 1 C T - ReadM SNP 0045.scaffold00159 317757 1 A C - ScafM INDEL 0045.scaffold00159 318863 5 TTCGC ..... scaffold17735 ScafM SNP 0045.scaffold00159 318888 1 A C scaffold17735 ScafM SNP 0045.scaffold00159 319127 1 G A scaffold17735 ScafM SNP 0045.scaffold00159 319206 1 A G scaffold17735 ScafM SNP 0045.scaffold00159 319314 1 A G scaffold17735 ScafM SNP 0045.scaffold00159 319322 1 A G scaffold17735 ScafM SNP 0045.scaffold00159 319370 1 T C scaffold17735 ScafM SNP 0045.scaffold00159 319419 1 G A scaffold17735 ScafM SNP 0045.scaffold00159 319447 2 AT GA scaffold17735 ScafM SNP 0045.scaffold00159 319802 1 A G scaffold17735 ScafM SNP 0045.scaffold00159 319904 1 T C scaffold17735 ScafM SNP 0045.scaffold00159 320031 1 C T scaffold17735 ScafM SNP 0045.scaffold00159 320243 1 C G scaffold17735 ScafM SNP 0045.scaffold00159 320290 1 G A scaffold17735 ScafM INDEL 0045.scaffold00159 320342 1 . T scaffold17735 ScafM SNP 0045.scaffold00159 320362 1 T A scaffold17735 ScafM SNP 0045.scaffold00159 320397 1 G A scaffold17735 ScafM SNP 0045.scaffold00159 320428 1 T C scaffold17735 ScafM SNP 0045.scaffold00159 320570 1 T C scaffold17735 ScafM SNP 0045.scaffold00159 325618 1 G A scaffold63886 ScafM SNP 0045.scaffold00159 325732 1 T C scaffold63886 ScafM SNP 0045.scaffold00159 325998 1 G A scaffold63886 ScafM SNP 0045.scaffold00159 326069 1 A G scaffold63886 ScafM SNP 0045.scaffold00159 327184 1 A G scaffold29022 ScafM SNP 0045.scaffold00159 327189 1 G A scaffold29022 ScafM SNP 0045.scaffold00159 327194 1 C T scaffold29022 ScafM SNP 0045.scaffold00159 327196 3 GAC AGT scaffold29022 ScafM SNP 0045.scaffold00159 327201 1 G A scaffold29022 ScafM INDEL 0045.scaffold00159 327203 1 A . scaffold29022 ScafM SNP 0045.scaffold00159 327213 1 G T scaffold29022 ScafM SNP 0045.scaffold00159 327228 1 C T scaffold29022 ScafM SNP 0045.scaffold00159 327230 1 G T scaffold29022 ScafM SNP 0045.scaffold00159 327236 1 A G scaffold29022 ScafM SNP 0045.scaffold00159 327239 1 C T scaffold29022 ScafM SNP 0045.scaffold00159 327279 1 C A scaffold29022 ScafM SNP 0045.scaffold00159 327293 1 G A scaffold29022 ScafM SNP 0045.scaffold00159 327296 1 T C scaffold29022 ScafM SNP 0045.scaffold00159 327304 1 G A scaffold29022 ScafM SNP 0045.scaffold00159 327317 1 G A scaffold29022 ScafM SNP 0045.scaffold00159 327324 1 A C scaffold29022 ScafM SNP 0045.scaffold00159 327328 1 C A scaffold29022 ScafM INDEL 0045.scaffold00159 327334 7 ....... TCACACA scaffold29022 ScafM SNP 0045.scaffold00159 327358 1 G T scaffold29022 ScafM SNP 0045.scaffold00159 327361 1 A C scaffold29022 ScafM SNP 0045.scaffold00159 327391 1 A C scaffold29022 ScafM SNP 0045.scaffold00159 327415 3 CAA GGG scaffold29022 ScafM SNP 0045.scaffold00159 327433 1 G A scaffold29022 ScafM INDEL 0045.scaffold00159 327438 1 C . scaffold29022 ScafM INDEL 0045.scaffold00159 327440 2 AA .. scaffold29022 ScafM SNP 0045.scaffold00159 327445 1 G A scaffold29022 ReadM INDEL 0045.scaffold00159 330191 1 C . - ScafM SNP 0045.scaffold00159 332315 1 A T scaffold34526 ReadM SNP 0045.scaffold00159 335994 1 A T - ReadM SNP 0045.scaffold00159 336701 1 C T - ReadM SNP 0045.scaffold00159 337135 1 A G - ScafM SNP 0045.scaffold00159 340519 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 340549 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 340677 1 G T scaffold31246 ScafM SNP 0045.scaffold00159 340726 1 T G scaffold31246 ScafM SNP 0045.scaffold00159 340729 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 340802 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 341069 1 A G scaffold31246 ReadM SNP 0045.scaffold00159 341631 1 A G - ReadM INDEL 0045.scaffold00159 341714 1 . A - ReadM SNP 0045.scaffold00159 341741 1 A G - ReadM SNP 0045.scaffold00159 341781 1 G T - ScafM SNP 0045.scaffold00159 342355 1 G C scaffold31246 ScafM SNP 0045.scaffold00159 342428 1 C T scaffold31246 ScafM INDEL 0045.scaffold00159 342570 9 ......... AATAGAGAA scaffold31246 ScafM SNP 0045.scaffold00159 342619 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 342714 1 C G scaffold31246 Both SNP 0045.scaffold00159 343179 1 T A scaffold31246 ReadM SNP 0045.scaffold00159 343273 1 T C - ReadM SNP 0045.scaffold00159 343314 1 T C - ReadM SNP 0045.scaffold00159 343322 1 A G - ReadM SNP 0045.scaffold00159 343393 1 A G - ScafM SNP 0045.scaffold00159 343841 1 A G scaffold31246 ScafM SNP 0045.scaffold00159 343905 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 344075 1 T A scaffold31246 ScafM SNP 0045.scaffold00159 344112 1 G A scaffold31246 ScafM SNP 0045.scaffold00159 344198 1 T A scaffold31246 ScafM SNP 0045.scaffold00159 344259 1 C T scaffold31246 ReadM SNP 0045.scaffold00159 344796 1 A C - ReadM SNP 0045.scaffold00159 345002 1 C T - ReadM SNP 0045.scaffold00159 345183 1 G T - ReadM SNP 0045.scaffold00159 345366 1 C T - ReadM SNP 0045.scaffold00159 345415 1 G A - ReadM SNP 0045.scaffold00159 345436 1 A G - ReadM SNP 0045.scaffold00159 345522 1 C G - ReadM SNP 0045.scaffold00159 345535 1 A G - ReadM SNP 0045.scaffold00159 345555 1 T A - ReadM SNP 0045.scaffold00159 345955 1 C T - ReadM SNP 0045.scaffold00159 346373 1 G A - ReadM SNP 0045.scaffold00159 346584 1 G A - ScafM SNP 0045.scaffold00159 346658 2 AA GG scaffold31246 ReadM SNP 0045.scaffold00159 346746 1 A G - ReadM SNP 0045.scaffold00159 346929 1 A G - ReadM SNP 0045.scaffold00159 346948 1 T C - ReadM SNP 0045.scaffold00159 347036 1 A G - ScafM SNP 0045.scaffold00159 352999 1 T C scaffold31246 ScafM SNP 0045.scaffold00159 353137 1 G A scaffold31246 ScafM INDEL 0045.scaffold00159 353217 1 . T scaffold31246 ScafM SNP 0045.scaffold00159 353219 1 G C scaffold31246 ScafM SNP 0045.scaffold00159 353251 1 T C scaffold31246 ScafM SNP 0045.scaffold00159 353257 1 A T scaffold31246 ScafM SNP 0045.scaffold00159 353268 1 C T scaffold31246 ScafM INDEL 0045.scaffold00159 353276 1 T . scaffold31246 ScafM SNP 0045.scaffold00159 353293 1 C A scaffold31246 ScafM INDEL 0045.scaffold00159 353309 3 TTA ... scaffold31246 ScafM INDEL 0045.scaffold00159 353333 1 T . scaffold31246 ScafM SNP 0045.scaffold00159 353335 1 T A scaffold31246 ScafM SNP 0045.scaffold00159 353439 1 T C scaffold31246 ScafM SNP 0045.scaffold00159 353519 1 C T scaffold31246 ScafM SNP 0045.scaffold00159 353611 1 T C scaffold31246 ScafM SNP 0045.scaffold00159 353626 1 T A scaffold31246 ScafM SNP 0045.scaffold00159 353633 1 G C scaffold31246 ScafM INDEL 0045.scaffold00159 353673 5 ACTGT ..... scaffold31246 ReadM SNP 0045.scaffold00159 354342 1 T C - ReadM SNP 0045.scaffold00159 354643 1 T C - ReadM SNP 0045.scaffold00159 354685 1 G A - ReadM SNP 0045.scaffold00159 354876 1 G A - ReadM SNP 0045.scaffold00159 354888 1 A C - ReadM SNP 0045.scaffold00159 354931 1 C A - ReadM SNP 0045.scaffold00159 354986 1 A C - ReadM SNP 0045.scaffold00159 355055 1 T C - ReadM SNP 0045.scaffold00159 355421 1 A G - ReadM SNP 0045.scaffold00159 355430 1 A G - ReadM SNP 0045.scaffold00159 355452 1 C G - ReadM SNP 0045.scaffold00159 355479 1 A G - ReadM SNP 0045.scaffold00159 355483 1 T G - ReadM SNP 0045.scaffold00159 355500 1 A C - ReadM SNP 0045.scaffold00159 355593 1 C G - ReadM SNP 0045.scaffold00159 355616 1 A C - ReadM SNP 0045.scaffold00159 355634 1 A G - ReadM SNP 0045.scaffold00159 355730 1 A G - ReadM SNP 0045.scaffold00159 356203 1 A G - ReadM SNP 0045.scaffold00159 356272 1 A G - ReadM SNP 0045.scaffold00159 356329 1 A G - ReadM SNP 0045.scaffold00159 356376 1 T C - ScafM SNP 0045.scaffold00159 356512 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 356518 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 356618 1 C T scaffold9604 Both SNP 0045.scaffold00159 356633 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 356635 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 356711 1 G T scaffold9604 ScafM SNP 0045.scaffold00159 356715 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 356731 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 356749 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 356752 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 356758 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 356760 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 356764 1 T C scaffold9604 ReadM SNP 0045.scaffold00159 356766 1 T G - ReadM SNP 0045.scaffold00159 356792 1 A G - ScafM SNP 0045.scaffold00159 356805 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 356841 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 356852 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 356869 1 G C scaffold9604 ScafM SNP 0045.scaffold00159 356912 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 356928 1 A G scaffold9604 Both SNP 0045.scaffold00159 356949 1 A C scaffold9604 Both SNP 0045.scaffold00159 356968 1 A C scaffold9604 ReadM SNP 0045.scaffold00159 357136 1 C T - ReadM SNP 0045.scaffold00159 357151 1 A G - ReadM SNP 0045.scaffold00159 357256 1 G A - ReadM SNP 0045.scaffold00159 357271 1 T C - ReadM SNP 0045.scaffold00159 357404 1 A C - ReadM SNP 0045.scaffold00159 357413 1 G C - ReadM SNP 0045.scaffold00159 357480 1 T C - ReadM SNP 0045.scaffold00159 357548 1 T G - ReadM SNP 0045.scaffold00159 357605 1 C T - ReadM SNP 0045.scaffold00159 357627 1 G A - ReadM SNP 0045.scaffold00159 357652 1 C T - ReadM SNP 0045.scaffold00159 357689 1 T C - ReadM SNP 0045.scaffold00159 357704 1 T C - ReadM SNP 0045.scaffold00159 357739 1 A G - ReadM SNP 0045.scaffold00159 357788 1 G T - ReadM SNP 0045.scaffold00159 358008 1 G A - ReadM SNP 0045.scaffold00159 358065 1 A G - ReadM SNP 0045.scaffold00159 358068 1 G A - ReadM SNP 0045.scaffold00159 358110 1 C T - ReadM SNP 0045.scaffold00159 358246 1 A C - ReadM SNP 0045.scaffold00159 358259 1 C T - ReadM SNP 0045.scaffold00159 358307 1 T C - ReadM SNP 0045.scaffold00159 358414 1 A G - ReadM SNP 0045.scaffold00159 358438 1 G T - ReadM SNP 0045.scaffold00159 358487 1 G A - ReadM SNP 0045.scaffold00159 358617 1 A T - ReadM SNP 0045.scaffold00159 358622 1 C A - ReadM SNP 0045.scaffold00159 358805 1 T C - ReadM SNP 0045.scaffold00159 358830 1 C A - ReadM SNP 0045.scaffold00159 358909 1 G A - ReadM SNP 0045.scaffold00159 358934 1 A T - ReadM SNP 0045.scaffold00159 359006 1 T A - ReadM SNP 0045.scaffold00159 359014 1 A T - ReadM SNP 0045.scaffold00159 359060 1 T C - ReadM SNP 0045.scaffold00159 359100 1 A G - ReadM SNP 0045.scaffold00159 359187 1 A T - ReadM SNP 0045.scaffold00159 359243 1 T G - ReadM SNP 0045.scaffold00159 359345 1 T A - ReadM SNP 0045.scaffold00159 359394 1 G T - ReadM SNP 0045.scaffold00159 359551 1 A G - ReadM SNP 0045.scaffold00159 359697 1 C T - ReadM SNP 0045.scaffold00159 359732 1 C T - ReadM SNP 0045.scaffold00159 359772 1 G T - ReadM SNP 0045.scaffold00159 359817 1 A G - ReadM SNP 0045.scaffold00159 359848 1 T C - ReadM INDEL 0045.scaffold00159 360085 1 . G - ReadM SNP 0045.scaffold00159 360147 1 T C - ReadM SNP 0045.scaffold00159 360190 1 C T - ReadM SNP 0045.scaffold00159 360360 1 T C - ReadM SNP 0045.scaffold00159 360375 1 A T - ReadM SNP 0045.scaffold00159 360447 1 A G - ReadM SNP 0045.scaffold00159 360562 1 T A - ReadM SNP 0045.scaffold00159 360659 1 A G - ReadM SNP 0045.scaffold00159 360726 1 G T - ReadM SNP 0045.scaffold00159 360789 1 C T - Both SNP 0045.scaffold00159 360896 1 C A scaffold31246 Both SNP 0045.scaffold00159 360924 1 A G scaffold31246 ReadM INDEL 0045.scaffold00159 361095 1 G . - ReadM SNP 0045.scaffold00159 361212 1 C T - ReadM SNP 0045.scaffold00159 361255 1 G A - ReadM SNP 0045.scaffold00159 361273 1 T C - ReadM SNP 0045.scaffold00159 361324 1 T C - ReadM SNP 0045.scaffold00159 361352 1 T A - ReadM SNP 0045.scaffold00159 361493 1 T C - ScafM INDEL 0045.scaffold00159 361882 5 ..... GGAAC scaffold9604 ScafM INDEL 0045.scaffold00159 361883 3 ... GAG scaffold9604 ScafM INDEL 0045.scaffold00159 361893 1 . T scaffold9604 ScafM SNP 0045.scaffold00159 361937 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 361970 1 G A scaffold9604 ScafM INDEL 0045.scaffold00159 361977 1 . T scaffold9604 ScafM INDEL 0045.scaffold00159 361997 5 ..... AAGGC scaffold9604 ScafM SNP 0045.scaffold00159 362013 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 362051 1 T A scaffold9604 ScafM SNP 0045.scaffold00159 362070 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 366577 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 366592 2 TG CA scaffold9604 ScafM SNP 0045.scaffold00159 366597 1 T G scaffold9604 ScafM SNP 0045.scaffold00159 366650 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 366660 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 366672 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 366676 1 C G scaffold9604 ScafM INDEL 0045.scaffold00159 366679 2 .. TG scaffold9604 ScafM SNP 0045.scaffold00159 366680 3 AAA TTG scaffold9604 ScafM SNP 0045.scaffold00159 366684 1 C T scaffold9604 ScafM INDEL 0045.scaffold00159 366686 2 .G AC scaffold9604 ScafM INDEL 0045.scaffold00159 366691 1 G . scaffold9604 ScafM SNP 0045.scaffold00159 366693 1 A G scaffold9604 ScafM SNP 0045.scaffold00159 366697 1 A C scaffold9604 ScafM SNP 0045.scaffold00159 366699 2 CT TG scaffold9604 ScafM INDEL 0045.scaffold00159 366703 1 . G scaffold9604 ScafM SNP 0045.scaffold00159 366708 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 366710 2 AA CT scaffold9604 ScafM SNP 0045.scaffold00159 366713 1 G A scaffold9604 ScafM INDEL 0045.scaffold00159 366717 1 T . scaffold9604 ScafM SNP 0045.scaffold00159 366719 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 366722 2 GG AA scaffold9604 ScafM SNP 0045.scaffold00159 366726 3 GTT AAA scaffold9604 ScafM SNP 0045.scaffold00159 366731 3 AAG TTA scaffold9604 ScafM SNP 0045.scaffold00159 366736 2 TT AA scaffold9604 ScafM INDEL 0045.scaffold00159 366740 1 A . scaffold9604 ScafM SNP 0045.scaffold00159 366745 2 CC GA scaffold9604 ScafM SNP 0045.scaffold00159 366751 1 C T scaffold9604 ScafM INDEL 0045.scaffold00159 366752 2 .A GG scaffold9604 ScafM SNP 0045.scaffold00159 366757 1 C G scaffold9604 ScafM INDEL 0045.scaffold00159 366758 1 . G scaffold9604 ScafM SNP 0045.scaffold00159 366761 2 TT AA scaffold9604 ScafM SNP 0045.scaffold00159 366764 3 TGC AAT scaffold9604 ScafM INDEL 0045.scaffold00159 366771 3 TGT .AA scaffold9604 ScafM SNP 0045.scaffold00159 366775 1 G A scaffold9604 ScafM INDEL 0045.scaffold00159 366824 2 TA .. scaffold9604 ReadM SNP 0045.scaffold00159 366906 1 G A - ReadM SNP 0045.scaffold00159 366959 1 G A - ScafM SNP 0045.scaffold00159 367007 1 C T scaffold9604 ScafM SNP 0045.scaffold00159 367015 2 TG CA scaffold9604 ScafM SNP 0045.scaffold00159 367022 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 367040 2 TT CG scaffold9604 ScafM INDEL 0045.scaffold00159 367192 1 . T scaffold9604 ScafM SNP 0045.scaffold00159 367196 1 G A scaffold9604 ScafM SNP 0045.scaffold00159 367216 1 A C scaffold9604 ScafM INDEL 0045.scaffold00159 367275 1 T . scaffold9604 ScafM SNP 0045.scaffold00159 367283 1 T C scaffold9604 ScafM SNP 0045.scaffold00159 369390 1 T A scaffold31246 ScafM INDEL 0045.scaffold00159 369445 1 A . scaffold31246 ReadM SNP 0045.scaffold00159 371044 1 G A - ReadM SNP 0045.scaffold00159 371130 1 G C - ReadM SNP 0045.scaffold00159 371241 1 C T - ReadM SNP 0045.scaffold00159 371297 1 T G - ReadM SNP 0045.scaffold00159 371329 1 A G -