Method VarType Scaf Position VarLen Reference Varient SOAPScaf ScafM SNP 0001.scaffold00002 112 1 A G scaffold24243 ScafM INDEL 0001.scaffold00002 124 6 ATTAAA ...... scaffold24243 ScafM INDEL 0001.scaffold00002 136 1 . G scaffold24243 ScafM SNP 0001.scaffold00002 191 1 C T scaffold24243 ScafM INDEL 0001.scaffold00002 196 1 T . scaffold24243 ScafM SNP 0001.scaffold00002 250 1 T A scaffold24243 ScafM SNP 0001.scaffold00002 253 1 C A scaffold24243 ScafM INDEL 0001.scaffold00002 345 2 .A GG scaffold24243 ReadM SNP 0001.scaffold00002 1871 1 C T - ScafM SNP 0001.scaffold00002 2123 1 C A scaffold10040 ScafM SNP 0001.scaffold00002 2168 1 T G scaffold10040 ScafM SNP 0001.scaffold00002 2175 1 G C scaffold10040 ScafM SNP 0001.scaffold00002 2241 1 G A scaffold10040 ReadM SNP 0001.scaffold00002 2661 1 A G - ReadM SNP 0001.scaffold00002 8130 1 G C - ReadM SNP 0001.scaffold00002 10365 1 A C - ScafM SNP 0001.scaffold00002 13579 1 C T scaffold1936 ScafM SNP 0001.scaffold00002 13604 1 A C scaffold1936 ScafM SNP 0001.scaffold00002 18043 1 C T scaffold2953 Both SNP 0001.scaffold00002 19578 1 A C scaffold2953 Both SNP 0001.scaffold00002 19595 1 T A scaffold2953 Both SNP 0001.scaffold00002 19689 1 T C scaffold2953 Both SNP 0001.scaffold00002 19728 1 A G scaffold2953 ScafM SNP 0001.scaffold00002 19833 1 C T scaffold2953 ScafM SNP 0001.scaffold00002 19845 1 C T scaffold2953 ScafM SNP 0001.scaffold00002 19851 1 T C scaffold2953 ScafM SNP 0001.scaffold00002 19874 1 C T scaffold2953 ScafM SNP 0001.scaffold00002 19939 1 A T scaffold2953 Both SNP 0001.scaffold00002 19953 1 T A scaffold2953 Both SNP 0001.scaffold00002 20028 1 G A scaffold2953 Both SNP 0001.scaffold00002 20061 1 T C scaffold2953 Both SNP 0001.scaffold00002 20187 1 G A scaffold2953 ScafM SNP 0001.scaffold00002 20305 1 G A scaffold2953 ScafM INDEL 0001.scaffold00002 20319 1 . C scaffold2953 ScafM SNP 0001.scaffold00002 20323 1 G T scaffold2953 ScafM SNP 0001.scaffold00002 20350 1 A T scaffold2953 Both SNP 0001.scaffold00002 20388 1 T C scaffold2953 Both INDEL 0001.scaffold00002 20421 1 A . scaffold2953 Both SNP 0001.scaffold00002 20548 1 A C scaffold2953 Both SNP 0001.scaffold00002 20552 1 G A scaffold2953 ScafM INDEL 0001.scaffold00002 20611 2 .. TA scaffold2953 ReadM SNP 0001.scaffold00002 21108 1 T A - Both SNP 0001.scaffold00002 21227 1 T C scaffold2953 Both SNP 0001.scaffold00002 21240 1 A T scaffold2953 ReadM SNP 0001.scaffold00002 21342 1 A T - ScafM SNP 0001.scaffold00002 21414 1 A G scaffold2953 Both SNP 0001.scaffold00002 21480 1 T C scaffold2953 ScafM INDEL 0001.scaffold00002 21591 4 .... ATAT scaffold2953 ScafM SNP 0001.scaffold00002 21600 1 C A scaffold2953 ScafM INDEL 0001.scaffold00002 21629 1 . T scaffold2953 ScafM SNP 0001.scaffold00002 21906 1 A G scaffold2953 ScafM SNP 0001.scaffold00002 22029 1 T C scaffold2953 ScafM SNP 0001.scaffold00002 22038 1 A G scaffold2953 ScafM INDEL 0001.scaffold00002 22080 3 TTT ... scaffold2953 ScafM INDEL 0001.scaffold00002 22786 2 AA .. scaffold15336 ScafM INDEL 0001.scaffold00002 22822 8 ........ GTCAACCA scaffold15336 ScafM SNP 0001.scaffold00002 22837 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 22905 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 23106 1 A . scaffold15336 ScafM INDEL 0001.scaffold00002 23111 1 T . scaffold15336 ScafM SNP 0001.scaffold00002 23132 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 23144 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 23159 1 A G scaffold15336 Both SNP 0001.scaffold00002 23189 1 C A scaffold15336 Both SNP 0001.scaffold00002 23351 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 24483 1 . T scaffold15336 ReadM INDEL 0001.scaffold00002 24518 1 . A - Both SNP 0001.scaffold00002 25103 1 T A scaffold15336 Both SNP 0001.scaffold00002 25855 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 27493 8 ........ ATATTTTT scaffold15336 ScafM SNP 0001.scaffold00002 27495 1 G A scaffold15336 Both SNP 0001.scaffold00002 27680 1 G A scaffold15336 Both SNP 0001.scaffold00002 27733 1 T C scaffold15336 Both SNP 0001.scaffold00002 27923 1 T C scaffold15336 Both SNP 0001.scaffold00002 28032 1 C T scaffold15336 Both SNP 0001.scaffold00002 28038 1 G A scaffold15336 Both SNP 0001.scaffold00002 28078 1 A G scaffold15336 ReadM SNP 0001.scaffold00002 29601 1 A G - ReadM SNP 0001.scaffold00002 29850 1 T G - ReadM SNP 0001.scaffold00002 30010 1 G C - ReadM SNP 0001.scaffold00002 30109 1 T C - ReadM SNP 0001.scaffold00002 30185 1 T C - ReadM SNP 0001.scaffold00002 30324 1 C T - ReadM SNP 0001.scaffold00002 30640 1 A T - ReadM SNP 0001.scaffold00002 31020 1 T G - ReadM SNP 0001.scaffold00002 31234 1 T C - ReadM SNP 0001.scaffold00002 31259 1 G A - ReadM SNP 0001.scaffold00002 31781 1 G A - ReadM SNP 0001.scaffold00002 31798 1 T A - ScafM SNP 0001.scaffold00002 32073 1 G A scaffold15336 ReadM INDEL 0001.scaffold00002 32361 2 .. AG - ReadM SNP 0001.scaffold00002 32401 1 T A - ReadM SNP 0001.scaffold00002 32836 1 T G - ReadM SNP 0001.scaffold00002 32992 1 T C - ReadM SNP 0001.scaffold00002 33097 1 T C - ReadM SNP 0001.scaffold00002 33099 1 A G - ReadM SNP 0001.scaffold00002 33391 1 T C - ReadM SNP 0001.scaffold00002 33475 1 G A - ReadM SNP 0001.scaffold00002 33569 1 T A - ReadM SNP 0001.scaffold00002 33666 1 A G - ReadM SNP 0001.scaffold00002 33741 1 C T - Both SNP 0001.scaffold00002 33811 1 T C scaffold15336 Both SNP 0001.scaffold00002 33839 1 C A scaffold15336 Both SNP 0001.scaffold00002 33855 1 T C scaffold15336 Both SNP 0001.scaffold00002 33905 1 A G scaffold15336 Both INDEL 0001.scaffold00002 33918 1 . T scaffold15336 ScafM INDEL 0001.scaffold00002 33950 1 . T scaffold15336 Both SNP 0001.scaffold00002 34037 1 T C scaffold15336 Both SNP 0001.scaffold00002 34048 1 A G scaffold15336 Both SNP 0001.scaffold00002 34064 1 T A scaffold15336 Both SNP 0001.scaffold00002 34117 1 T C scaffold15336 Both SNP 0001.scaffold00002 34306 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 34590 3 ... AAA scaffold15336 ScafM SNP 0001.scaffold00002 34639 2 GA TC scaffold15336 ScafM SNP 0001.scaffold00002 34676 1 A T scaffold15336 ScafM INDEL 0001.scaffold00002 34708 1 . A scaffold15336 ReadM SNP 0001.scaffold00002 37501 1 G A - ReadM SNP 0001.scaffold00002 37974 1 C T - ScafM SNP 0001.scaffold00002 38894 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 38902 1 G A scaffold15336 ReadM INDEL 0001.scaffold00002 39167 2 .. CA - ReadM SNP 0001.scaffold00002 39828 1 G T - ReadM SNP 0001.scaffold00002 39878 1 T A - ReadM SNP 0001.scaffold00002 40107 1 A T - ReadM SNP 0001.scaffold00002 40372 1 C T - ReadM SNP 0001.scaffold00002 40397 1 C G - ReadM SNP 0001.scaffold00002 40403 1 T C - ReadM SNP 0001.scaffold00002 40528 1 C A - ReadM INDEL 0001.scaffold00002 40696 2 AC .. - ReadM SNP 0001.scaffold00002 41077 1 T C - ReadM SNP 0001.scaffold00002 41618 1 A G - ReadM SNP 0001.scaffold00002 41696 1 T G - ReadM SNP 0001.scaffold00002 41719 1 A G - ReadM SNP 0001.scaffold00002 41792 1 A G - ScafM SNP 0001.scaffold00002 42186 1 G C scaffold15336 ScafM SNP 0001.scaffold00002 42225 1 G A scaffold15336 Both SNP 0001.scaffold00002 42331 1 T A scaffold15336 Both SNP 0001.scaffold00002 42347 1 G A scaffold15336 Both SNP 0001.scaffold00002 42355 1 T G scaffold15336 ScafM INDEL 0001.scaffold00002 42488 20 GCAGCAATAGGATGCACAAC .................... scaffold15336 ScafM INDEL 0001.scaffold00002 42509 4 GTAG .... scaffold15336 ScafM INDEL 0001.scaffold00002 42522 3 AGG ... scaffold15336 ScafM SNP 0001.scaffold00002 42539 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 42676 12 ............ TTGTAAACCAAC scaffold15336 ScafM SNP 0001.scaffold00002 42722 2 TC CT scaffold15336 ScafM SNP 0001.scaffold00002 42787 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 42794 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 42804 2 AC GA scaffold15336 Both SNP 0001.scaffold00002 42834 1 C T scaffold15336 Both SNP 0001.scaffold00002 42888 1 G A scaffold15336 Both SNP 0001.scaffold00002 42909 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 42921 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 42944 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 42973 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 42990 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 43018 1 C T scaffold15336 ReadM SNP 0001.scaffold00002 43131 1 G C - ReadM SNP 0001.scaffold00002 43146 1 A G - Both SNP 0001.scaffold00002 43175 1 T C scaffold15336 Both SNP 0001.scaffold00002 43236 1 C T scaffold15336 Both SNP 0001.scaffold00002 43316 1 A G scaffold15336 Both SNP 0001.scaffold00002 43332 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 43687 1 A G scaffold15336 ReadM SNP 0001.scaffold00002 43974 1 T A - ScafM SNP 0001.scaffold00002 44025 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 44042 1 T C scaffold15336 ReadM SNP 0001.scaffold00002 44147 1 T C - ReadM SNP 0001.scaffold00002 44191 1 T C - ReadM SNP 0001.scaffold00002 44195 1 T C - ScafM INDEL 0001.scaffold00002 44363 7 TAAAAAA ....... scaffold15336 ScafM SNP 0001.scaffold00002 44389 1 C G scaffold15336 ScafM INDEL 0001.scaffold00002 44432 1 . A scaffold15336 Both SNP 0001.scaffold00002 44542 1 G A scaffold15336 Both SNP 0001.scaffold00002 44635 1 A C scaffold15336 Both SNP 0001.scaffold00002 44691 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 44942 5 TTTCC ..... scaffold15336 Both SNP 0001.scaffold00002 45243 1 C T scaffold15336 Both SNP 0001.scaffold00002 45282 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 45340 1 T G scaffold15336 ScafM INDEL 0001.scaffold00002 45372 1 . A scaffold15336 ScafM INDEL 0001.scaffold00002 45401 2 .. AA scaffold15336 ReadM SNP 0001.scaffold00002 45530 1 C T - ReadM SNP 0001.scaffold00002 45658 1 T A - ReadM SNP 0001.scaffold00002 45728 1 T A - ReadM SNP 0001.scaffold00002 45744 1 A C - ReadM SNP 0001.scaffold00002 45876 1 T G - Both SNP 0001.scaffold00002 45949 1 C T scaffold15336 Both SNP 0001.scaffold00002 46056 1 T A scaffold15336 Both SNP 0001.scaffold00002 46118 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 46309 1 G C scaffold15336 ScafM INDEL 0001.scaffold00002 46397 25 ......................... TCTTAGACATTTTTTCTGGAAATTA scaffold15336 ScafM INDEL 0001.scaffold00002 46404 24 ........................ TATATATAACCCTGTGTTTTCGAC scaffold15336 ScafM INDEL 0001.scaffold00002 46411 5 ..... ATGAA scaffold15336 ScafM INDEL 0001.scaffold00002 46412 4 .... AACC scaffold15336 ScafM INDEL 0001.scaffold00002 46414 3 ... TAC scaffold15336 ScafM SNP 0001.scaffold00002 46417 1 G T scaffold15336 Both SNP 0001.scaffold00002 46516 1 G T scaffold15336 ScafM SNP 0001.scaffold00002 46537 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 46546 2 AA TT scaffold15336 Both SNP 0001.scaffold00002 46589 1 G A scaffold15336 Both SNP 0001.scaffold00002 46709 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 46758 6 GTTTTT ...... scaffold15336 ScafM SNP 0001.scaffold00002 46781 1 C G scaffold15336 Both SNP 0001.scaffold00002 47046 1 G C scaffold15336 Both SNP 0001.scaffold00002 47058 1 G T scaffold15336 ReadM SNP 0001.scaffold00002 47122 1 A G - ReadM SNP 0001.scaffold00002 47198 1 G A - ReadM SNP 0001.scaffold00002 47208 1 C A - ReadM SNP 0001.scaffold00002 47245 1 A T - ReadM SNP 0001.scaffold00002 47566 1 C T - ReadM INDEL 0001.scaffold00002 47632 1 . A - ReadM SNP 0001.scaffold00002 47696 1 G A - ReadM SNP 0001.scaffold00002 47714 1 T C - ReadM SNP 0001.scaffold00002 47735 1 A G - ReadM SNP 0001.scaffold00002 47769 1 G A - ReadM SNP 0001.scaffold00002 47876 1 A C - ReadM SNP 0001.scaffold00002 47878 1 A C - ReadM INDEL 0001.scaffold00002 47927 1 C . - ReadM SNP 0001.scaffold00002 47964 1 C T - ReadM SNP 0001.scaffold00002 48006 1 C G - ReadM INDEL 0001.scaffold00002 48028 1 A . - ReadM SNP 0001.scaffold00002 48228 1 A G - ReadM SNP 0001.scaffold00002 48234 1 C A - ReadM SNP 0001.scaffold00002 48300 1 A G - ReadM SNP 0001.scaffold00002 48399 1 T A - ReadM SNP 0001.scaffold00002 48449 1 G A - ReadM SNP 0001.scaffold00002 48499 1 T C - ReadM SNP 0001.scaffold00002 48502 1 G A - ReadM INDEL 0001.scaffold00002 48527 1 . A - ReadM SNP 0001.scaffold00002 48626 1 A G - ReadM INDEL 0001.scaffold00002 48656 1 T . - ReadM SNP 0001.scaffold00002 48677 1 G T - ReadM SNP 0001.scaffold00002 48722 1 G A - ReadM INDEL 0001.scaffold00002 48796 1 . G - ReadM INDEL 0001.scaffold00002 48829 1 C . - ReadM SNP 0001.scaffold00002 48857 1 T C - ReadM SNP 0001.scaffold00002 49122 1 A G - ReadM SNP 0001.scaffold00002 49454 1 C A - ReadM SNP 0001.scaffold00002 49499 1 A G - ReadM SNP 0001.scaffold00002 49605 1 G C - ReadM SNP 0001.scaffold00002 49641 1 T A - ReadM SNP 0001.scaffold00002 49646 1 A T - ReadM INDEL 0001.scaffold00002 49663 1 . G - ReadM SNP 0001.scaffold00002 49739 1 G A - ReadM SNP 0001.scaffold00002 49817 1 G A - ReadM SNP 0001.scaffold00002 49840 1 C A - ReadM SNP 0001.scaffold00002 49843 1 T C - ReadM SNP 0001.scaffold00002 49970 1 G T - ReadM SNP 0001.scaffold00002 50068 1 T A - ReadM SNP 0001.scaffold00002 50093 1 G C - ReadM INDEL 0001.scaffold00002 50103 1 . C - ReadM SNP 0001.scaffold00002 50170 1 A G - ReadM INDEL 0001.scaffold00002 50382 1 A . - ReadM SNP 0001.scaffold00002 50432 1 T C - ReadM SNP 0001.scaffold00002 50561 1 G T - ReadM SNP 0001.scaffold00002 50704 1 T C - ReadM SNP 0001.scaffold00002 50709 1 A T - ReadM SNP 0001.scaffold00002 50823 1 A T - ReadM INDEL 0001.scaffold00002 50895 1 T . - ReadM SNP 0001.scaffold00002 51002 1 T C - ReadM SNP 0001.scaffold00002 51414 1 G T - ReadM SNP 0001.scaffold00002 51422 1 G A - ReadM SNP 0001.scaffold00002 51444 1 C T - ReadM SNP 0001.scaffold00002 51555 1 G A - ReadM SNP 0001.scaffold00002 51588 1 G T - ReadM SNP 0001.scaffold00002 51671 1 G A - ReadM SNP 0001.scaffold00002 51782 1 T C - ReadM SNP 0001.scaffold00002 52033 1 A T - ReadM SNP 0001.scaffold00002 52200 1 C T - ScafM SNP 0001.scaffold00002 52324 2 CA AT scaffold15336 Both SNP 0001.scaffold00002 52354 1 T A scaffold15336 ScafM SNP 0001.scaffold00002 52378 1 C T scaffold15336 Both SNP 0001.scaffold00002 52428 1 C T scaffold15336 Both SNP 0001.scaffold00002 52439 1 A G scaffold15336 Both SNP 0001.scaffold00002 52510 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 52557 1 T . scaffold15336 ScafM SNP 0001.scaffold00002 52567 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 52589 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 52614 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 52624 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 52657 1 A G scaffold15336 Both SNP 0001.scaffold00002 52738 1 G C scaffold15336 Both SNP 0001.scaffold00002 52928 1 T C scaffold15336 Both SNP 0001.scaffold00002 53103 1 T C scaffold15336 Both SNP 0001.scaffold00002 53110 1 A C scaffold15336 Both SNP 0001.scaffold00002 53127 1 A T scaffold15336 Both SNP 0001.scaffold00002 53226 1 T G scaffold15336 Both INDEL 0001.scaffold00002 53326 1 . T scaffold15336 Both SNP 0001.scaffold00002 53348 1 T G scaffold15336 ReadM SNP 0001.scaffold00002 53394 1 C T - ReadM SNP 0001.scaffold00002 53557 1 G T - Both SNP 0001.scaffold00002 53631 1 T C scaffold15336 Both SNP 0001.scaffold00002 53653 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 53690 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 53693 1 A T scaffold15336 ReadM SNP 0001.scaffold00002 53908 1 G A - ReadM SNP 0001.scaffold00002 54029 1 G C - ReadM SNP 0001.scaffold00002 54121 1 G A - ReadM INDEL 0001.scaffold00002 54153 1 T . - ReadM SNP 0001.scaffold00002 54287 1 G A - ReadM SNP 0001.scaffold00002 54405 1 A T - ReadM SNP 0001.scaffold00002 54453 1 C T - ReadM SNP 0001.scaffold00002 54642 1 T G - ReadM SNP 0001.scaffold00002 54714 1 C A - Both SNP 0001.scaffold00002 54783 1 A C scaffold15336 Both SNP 0001.scaffold00002 54861 1 G A scaffold15336 ReadM INDEL 0001.scaffold00002 55085 3 AGA ... - ReadM SNP 0001.scaffold00002 55141 1 G C - Both SNP 0001.scaffold00002 55291 1 T G scaffold15336 Both SNP 0001.scaffold00002 55521 1 G A scaffold15336 ReadM SNP 0001.scaffold00002 55649 1 G A - ReadM SNP 0001.scaffold00002 55794 1 T C - ReadM SNP 0001.scaffold00002 55873 1 C T - ReadM SNP 0001.scaffold00002 56013 1 C T - Both SNP 0001.scaffold00002 56075 1 T G scaffold15336 Both SNP 0001.scaffold00002 56302 1 T C scaffold15336 Both SNP 0001.scaffold00002 56312 1 G A scaffold15336 ReadM SNP 0001.scaffold00002 57369 1 T A - ReadM SNP 0001.scaffold00002 57401 1 C A - ReadM SNP 0001.scaffold00002 57623 1 C G - Both SNP 0001.scaffold00002 57701 1 A T scaffold15336 Both SNP 0001.scaffold00002 57735 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 57749 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 57811 1 G C scaffold15336 Both SNP 0001.scaffold00002 57879 1 G A scaffold15336 Both SNP 0001.scaffold00002 57901 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 57985 1 T A scaffold15336 Both SNP 0001.scaffold00002 58047 1 A T scaffold15336 Both INDEL 0001.scaffold00002 58097 1 T . scaffold15336 ScafM SNP 0001.scaffold00002 58152 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 58186 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 58210 1 T C scaffold15336 Both SNP 0001.scaffold00002 58248 1 G A scaffold15336 Both SNP 0001.scaffold00002 58275 1 A T scaffold15336 ScafM INDEL 0001.scaffold00002 58395 1 . G scaffold15336 Both SNP 0001.scaffold00002 58425 1 G A scaffold15336 Both SNP 0001.scaffold00002 58491 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 58595 1 G C scaffold15336 Both SNP 0001.scaffold00002 58624 1 C T scaffold15336 Both SNP 0001.scaffold00002 58747 1 A G scaffold15336 Both SNP 0001.scaffold00002 58954 1 T G scaffold15336 ScafM INDEL 0001.scaffold00002 59044 3 CCC ... scaffold15336 ScafM SNP 0001.scaffold00002 59048 2 CC TT scaffold15336 Both SNP 0001.scaffold00002 59202 1 G C scaffold15336 Both SNP 0001.scaffold00002 59212 1 T A scaffold15336 Both SNP 0001.scaffold00002 59232 1 G A scaffold15336 Both SNP 0001.scaffold00002 59297 1 T C scaffold15336 Both SNP 0001.scaffold00002 59352 1 G T scaffold15336 ReadM SNP 0001.scaffold00002 59478 1 T C - ReadM SNP 0001.scaffold00002 59567 1 G C - Both SNP 0001.scaffold00002 59612 1 C T scaffold15336 Both SNP 0001.scaffold00002 59657 1 A T scaffold15336 ScafM INDEL 0001.scaffold00002 59708 7 ....... GTTTTTT scaffold15336 Both SNP 0001.scaffold00002 59984 1 A G scaffold15336 Both INDEL 0001.scaffold00002 60045 1 . A scaffold15336 ScafM SNP 0001.scaffold00002 60211 1 A T scaffold15336 Both SNP 0001.scaffold00002 60274 1 T C scaffold15336 Both SNP 0001.scaffold00002 60281 1 T A scaffold15336 Both INDEL 0001.scaffold00002 60287 1 A . scaffold15336 Both SNP 0001.scaffold00002 60408 1 C G scaffold15336 Both SNP 0001.scaffold00002 60470 1 A G scaffold15336 Both SNP 0001.scaffold00002 60478 1 T A scaffold15336 ScafM SNP 0001.scaffold00002 60507 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 60529 1 T A scaffold15336 Both INDEL 0001.scaffold00002 60535 1 A . scaffold15336 Both SNP 0001.scaffold00002 60558 1 A T scaffold15336 Both SNP 0001.scaffold00002 60764 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 60953 1 . C scaffold15336 Both INDEL 0001.scaffold00002 60982 1 . A scaffold15336 Both SNP 0001.scaffold00002 61041 1 C T scaffold15336 Both SNP 0001.scaffold00002 61083 1 C T scaffold15336 Both SNP 0001.scaffold00002 61191 1 T C scaffold15336 Both SNP 0001.scaffold00002 61205 1 G A scaffold15336 Both INDEL 0001.scaffold00002 61230 1 T . scaffold15336 Both SNP 0001.scaffold00002 61275 1 T C scaffold15336 Both SNP 0001.scaffold00002 61280 1 T C scaffold15336 Both SNP 0001.scaffold00002 61521 1 G T scaffold15336 Both SNP 0001.scaffold00002 61536 1 T G scaffold15336 Both SNP 0001.scaffold00002 61754 1 C G scaffold15336 Both SNP 0001.scaffold00002 61774 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 61781 1 C A scaffold15336 Both SNP 0001.scaffold00002 61806 1 G C scaffold15336 Both SNP 0001.scaffold00002 61850 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 61874 1 . A scaffold15336 ScafM SNP 0001.scaffold00002 61897 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 61900 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 61925 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 61935 1 G A scaffold15336 Both INDEL 0001.scaffold00002 61959 1 . C scaffold15336 ScafM SNP 0001.scaffold00002 62017 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 62020 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 62028 2 GG .A scaffold15336 Both SNP 0001.scaffold00002 62079 1 C T scaffold15336 Both SNP 0001.scaffold00002 62136 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62171 1 T A scaffold15336 ScafM INDEL 0001.scaffold00002 62172 1 . T scaffold15336 ScafM SNP 0001.scaffold00002 62175 1 T A scaffold15336 ScafM SNP 0001.scaffold00002 62189 1 G T scaffold15336 Both SNP 0001.scaffold00002 62202 1 A G scaffold15336 Both SNP 0001.scaffold00002 62332 1 G C scaffold15336 Both SNP 0001.scaffold00002 62423 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 62457 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 62468 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 62489 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 62531 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 62549 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62562 2 AT TG scaffold15336 Both SNP 0001.scaffold00002 62579 1 C A scaffold15336 Both SNP 0001.scaffold00002 62665 1 C G scaffold15336 Both SNP 0001.scaffold00002 62671 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62710 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62716 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 62722 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 62749 2 AA .. scaffold15336 ScafM SNP 0001.scaffold00002 62757 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 62783 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 62786 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 62795 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 62823 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62825 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 62834 1 T C scaffold15336 ScafM INDEL 0001.scaffold00002 62838 2 TA .G scaffold15336 ScafM INDEL 0001.scaffold00002 62856 1 A . scaffold15336 ScafM SNP 0001.scaffold00002 62873 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 62880 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 62897 1 T A scaffold15336 ScafM INDEL 0001.scaffold00002 62903 1 . C scaffold15336 ScafM INDEL 0001.scaffold00002 62908 3 ... CTT scaffold15336 ScafM SNP 0001.scaffold00002 62913 2 CT GC scaffold15336 ScafM SNP 0001.scaffold00002 62939 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 62942 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 62981 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 62997 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63008 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 63018 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 63059 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63072 2 TC CG scaffold15336 ScafM SNP 0001.scaffold00002 63085 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 63094 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63103 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63121 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 63135 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63155 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63158 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 63162 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63210 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63266 1 G T scaffold15336 ScafM SNP 0001.scaffold00002 63269 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63283 1 T A scaffold15336 ScafM SNP 0001.scaffold00002 63286 1 A C scaffold15336 ScafM INDEL 0001.scaffold00002 63289 2 AG .. scaffold15336 ScafM SNP 0001.scaffold00002 63292 1 G C scaffold15336 ScafM INDEL 0001.scaffold00002 63301 5 ..... ATGGA scaffold15336 ScafM SNP 0001.scaffold00002 63340 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 63355 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63382 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63429 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63435 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 63450 2 CT TC scaffold15336 ScafM INDEL 0001.scaffold00002 63455 2 .. TA scaffold15336 ScafM SNP 0001.scaffold00002 63466 1 C G scaffold15336 ScafM SNP 0001.scaffold00002 63495 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 63508 4 .CCT TTGG scaffold15336 ScafM SNP 0001.scaffold00002 63518 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63524 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63537 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 63540 2 GA AC scaffold15336 ScafM SNP 0001.scaffold00002 63546 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63582 3 ACA GTG scaffold15336 ScafM SNP 0001.scaffold00002 63586 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63595 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 63617 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63619 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63624 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63631 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63640 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 63642 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 63659 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 63675 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 63685 1 T C scaffold15336 ScafM INDEL 0001.scaffold00002 63692 28 CAGAAGCGGAATTGCCACAGCCACATAT ............................ scaffold15336 ScafM SNP 0001.scaffold00002 63727 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 63806 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63818 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 63820 2 TG .. scaffold15336 ScafM SNP 0001.scaffold00002 63832 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 63851 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 63863 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 63867 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 63875 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63895 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63901 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 63954 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63959 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 63964 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 63973 1 G T scaffold15336 ScafM SNP 0001.scaffold00002 63995 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 64007 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 64017 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 64035 1 T C scaffold15336 ScafM INDEL 0001.scaffold00002 64057 1 C . scaffold15336 ScafM SNP 0001.scaffold00002 64079 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 64084 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 64107 1 C G scaffold15336 ScafM SNP 0001.scaffold00002 64118 1 G C scaffold15336 ScafM SNP 0001.scaffold00002 64124 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 67295 1 C G scaffold15336 ScafM SNP 0001.scaffold00002 67321 1 A T scaffold15336 ScafM INDEL 0001.scaffold00002 67322 4 .... TATA scaffold15336 ScafM SNP 0001.scaffold00002 67331 1 C G scaffold15336 ScafM SNP 0001.scaffold00002 67337 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67347 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 67358 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67373 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67376 1 G C scaffold15336 ScafM SNP 0001.scaffold00002 67400 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67419 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 67433 1 G T scaffold15336 ScafM SNP 0001.scaffold00002 67464 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67470 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 67472 1 G T scaffold15336 ScafM SNP 0001.scaffold00002 67481 1 G T scaffold15336 ScafM INDEL 0001.scaffold00002 67490 3 ... AAT scaffold15336 ScafM SNP 0001.scaffold00002 67519 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 67527 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67534 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67541 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 67555 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 67570 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 67587 2 CC TT scaffold15336 ScafM SNP 0001.scaffold00002 67601 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67613 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67621 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 67630 1 A C scaffold15336 ScafM SNP 0001.scaffold00002 67653 2 CT GA scaffold15336 ScafM SNP 0001.scaffold00002 67662 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 67680 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 67692 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67871 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67884 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 67886 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 67896 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 67904 2 CA TT scaffold15336 ScafM SNP 0001.scaffold00002 67935 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 67942 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 67944 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 67965 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 67968 2 CG TC scaffold15336 ScafM SNP 0001.scaffold00002 67977 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 67999 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 68005 2 TC CA scaffold15336 ScafM SNP 0001.scaffold00002 68041 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 68044 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 68066 5 ..... AAAAA scaffold15336 ScafM SNP 0001.scaffold00002 68076 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 68092 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 68125 1 G T scaffold15336 ScafM INDEL 0001.scaffold00002 68145 1 A . scaffold15336 ScafM SNP 0001.scaffold00002 68155 2 GT TA scaffold15336 ScafM SNP 0001.scaffold00002 68164 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 68201 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 68216 1 G C scaffold15336 ScafM SNP 0001.scaffold00002 68221 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 68239 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 68249 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 68254 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 68260 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 68302 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 68315 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 68317 1 G A scaffold15336 ScafM INDEL 0001.scaffold00002 68320 1 C . scaffold15336 ScafM SNP 0001.scaffold00002 68332 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 68361 1 T A scaffold15336 ScafM SNP 0001.scaffold00002 68366 1 T G scaffold15336 ScafM SNP 0001.scaffold00002 68368 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 68388 2 AA GG scaffold15336 ScafM INDEL 0001.scaffold00002 68405 1 A . scaffold15336 ScafM INDEL 0001.scaffold00002 68407 1 T . scaffold15336 ScafM INDEL 0001.scaffold00002 68410 5 AATGT ..... scaffold15336 ScafM SNP 0001.scaffold00002 68434 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 68441 1 C T scaffold15336 ScafM INDEL 0001.scaffold00002 68456 31 ACTCCTTCAATCCTATACTCCAGCTAAACTT ............................... scaffold15336 ScafM INDEL 0001.scaffold00002 68490 25 GTCTAAACAAGAATTATTCAAGAAA ......................... scaffold15336 ScafM INDEL 0001.scaffold00002 68516 1 T . scaffold15336 ScafM INDEL 0001.scaffold00002 68519 1 G . scaffold15336 ScafM INDEL 0001.scaffold00002 68522 5 GGATA ..... scaffold15336 ScafM INDEL 0001.scaffold00002 68529 10 TTGGTACTAG .......... scaffold15336 ScafM SNP 0001.scaffold00002 68548 1 A T scaffold15336 ScafM SNP 0001.scaffold00002 68556 1 T C scaffold15336 ScafM SNP 0001.scaffold00002 68589 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 68593 1 C A scaffold15336 ScafM SNP 0001.scaffold00002 68612 1 A T scaffold15336 ScafM INDEL 0001.scaffold00002 68622 1 . A scaffold15336 ScafM SNP 0001.scaffold00002 68629 2 GA TT scaffold15336 ScafM SNP 0001.scaffold00002 68657 1 A G scaffold15336 ScafM INDEL 0001.scaffold00002 68671 10 TATCTTTGTG .......... scaffold15336 ScafM SNP 0001.scaffold00002 68711 1 C A scaffold15336 ScafM INDEL 0001.scaffold00002 68740 4 .... TATA scaffold15336 ScafM INDEL 0001.scaffold00002 68765 1 T . scaffold15336 ScafM INDEL 0001.scaffold00002 68767 1 G . scaffold15336 ScafM SNP 0001.scaffold00002 68773 1 A G scaffold15336 ScafM SNP 0001.scaffold00002 68804 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 69648 1 G A scaffold15336 ScafM SNP 0001.scaffold00002 69656 1 C T scaffold15336 ScafM SNP 0001.scaffold00002 69675 2 TT CG scaffold15336 ScafM SNP 0001.scaffold00002 69686 1 A T scaffold15336 ReadM SNP 0001.scaffold00002 69829 1 C A - ScafM INDEL 0001.scaffold00002 72112 3 CAG ... scaffold9343 ScafM SNP 0001.scaffold00002 72127 1 T C scaffold9343 ScafM SNP 0001.scaffold00002 72135 1 A G scaffold9343 ScafM SNP 0001.scaffold00002 72140 1 A C scaffold9343 ScafM SNP 0001.scaffold00002 72152 1 G A scaffold9343 ScafM INDEL 0001.scaffold00002 72165 5 CCAGC ..... scaffold9343 ScafM INDEL 0001.scaffold00002 72171 4 CAGC .... scaffold9343 ScafM SNP 0001.scaffold00002 72250 1 T C scaffold9343 ScafM SNP 0001.scaffold00002 72510 1 A T scaffold9343 ScafM INDEL 0001.scaffold00002 72539 3 TCT ... scaffold9343 ScafM INDEL 0001.scaffold00002 72545 3 TCT ... scaffold9343 ScafM SNP 0001.scaffold00002 72561 1 A T scaffold9343 ScafM SNP 0001.scaffold00002 72564 1 C T scaffold9343 ScafM SNP 0001.scaffold00002 72568 1 A G scaffold9343 ScafM SNP 0001.scaffold00002 72588 1 A G scaffold9343 ScafM SNP 0001.scaffold00002 72680 1 A G scaffold9343 ScafM SNP 0001.scaffold00002 76483 1 C T scaffold9343 ScafM SNP 0001.scaffold00002 76512 1 C T scaffold9343 ScafM SNP 0001.scaffold00002 76545 1 C T scaffold9343 ScafM SNP 0001.scaffold00002 76576 1 G A scaffold9343 ScafM SNP 0001.scaffold00002 76599 1 A T scaffold9343 ScafM SNP 0001.scaffold00002 76604 1 T C scaffold9343 ScafM SNP 0001.scaffold00002 76633 1 C T scaffold9343 ScafM SNP 0001.scaffold00002 76636 1 A G scaffold9343 ScafM SNP 0001.scaffold00002 76677 1 T C scaffold9343 ReadM SNP 0001.scaffold00002 77431 1 T C - ReadM SNP 0001.scaffold00002 77462 1 T C - ReadM SNP 0001.scaffold00002 77616 1 T C - ReadM SNP 0001.scaffold00002 77871 1 T A - ReadM SNP 0001.scaffold00002 77886 1 T C - ReadM SNP 0001.scaffold00002 77965 1 A G - ReadM SNP 0001.scaffold00002 78009 1 C T - ReadM SNP 0001.scaffold00002 78034 1 A G - ReadM SNP 0001.scaffold00002 78103 1 C T - ScafM SNP 0001.scaffold00002 78644 2 AA GT scaffold21332 ScafM INDEL 0001.scaffold00002 78708 16 ................ CCCATATTCCCAAAAT scaffold21332 ScafM SNP 0001.scaffold00002 78718 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 78721 1 T A scaffold21332 ScafM SNP 0001.scaffold00002 78740 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 78765 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 78773 1 C T scaffold21332 ScafM INDEL 0001.scaffold00002 78805 8 ........ AGACTCCT scaffold21332 ScafM SNP 0001.scaffold00002 78843 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 78879 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 78881 1 T C scaffold21332 ScafM INDEL 0001.scaffold00002 78890 3 ATA ... scaffold21332 ScafM SNP 0001.scaffold00002 78918 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 78929 1 T A scaffold21332 ScafM INDEL 0001.scaffold00002 78988 3 ... TTG scaffold21332 ScafM SNP 0001.scaffold00002 78992 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79000 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 79023 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79053 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 79068 1 T A scaffold21332 ScafM INDEL 0001.scaffold00002 79091 2 .. TT scaffold21332 ScafM SNP 0001.scaffold00002 79093 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 79106 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79131 2 AT TA scaffold21332 Both SNP 0001.scaffold00002 79147 1 A T scaffold21332 ScafM INDEL 0001.scaffold00002 79234 1 . A scaffold21332 ScafM SNP 0001.scaffold00002 79241 2 CA TT scaffold21332 ScafM SNP 0001.scaffold00002 79253 1 T C scaffold21332 ScafM INDEL 0001.scaffold00002 79281 6 ...... ATATAT scaffold21332 ScafM SNP 0001.scaffold00002 79335 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79345 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 79351 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 79362 2 AT TC scaffold21332 ScafM SNP 0001.scaffold00002 79378 1 C G scaffold21332 ScafM SNP 0001.scaffold00002 79427 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 79446 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 79470 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 79496 1 A T scaffold21332 ScafM SNP 0001.scaffold00002 79522 1 T G scaffold21332 ScafM SNP 0001.scaffold00002 79525 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79528 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79536 2 TG GA scaffold21332 ScafM SNP 0001.scaffold00002 79548 1 A T scaffold21332 ScafM SNP 0001.scaffold00002 79554 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79579 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79583 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 79590 1 T C scaffold21332 ScafM INDEL 0001.scaffold00002 79593 5 TTTAT ..... scaffold21332 ScafM SNP 0001.scaffold00002 79604 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79607 1 A T scaffold21332 ScafM SNP 0001.scaffold00002 79611 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79616 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79621 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 79629 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79632 1 G C scaffold21332 ScafM INDEL 0001.scaffold00002 79635 1 C . scaffold21332 ScafM INDEL 0001.scaffold00002 79641 1 . G scaffold21332 ScafM SNP 0001.scaffold00002 79644 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 79653 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79659 1 G T scaffold21332 ScafM INDEL 0001.scaffold00002 79680 1 C . scaffold21332 Both SNP 0001.scaffold00002 79751 1 G A scaffold21332 ScafM INDEL 0001.scaffold00002 79782 1 A . scaffold21332 ScafM INDEL 0001.scaffold00002 79791 1 . A scaffold21332 ScafM SNP 0001.scaffold00002 79812 1 G A scaffold21332 ScafM INDEL 0001.scaffold00002 79817 6 TTTTTT ...... scaffold21332 ScafM SNP 0001.scaffold00002 79839 1 G T scaffold21332 ScafM SNP 0001.scaffold00002 79845 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 79865 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 79868 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 79894 1 A G scaffold21332 Both SNP 0001.scaffold00002 79923 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 80149 1 T A scaffold21332 ScafM INDEL 0001.scaffold00002 80150 4 .... AAAT scaffold21332 Both SNP 0001.scaffold00002 80319 1 T G scaffold21332 ScafM SNP 0001.scaffold00002 80341 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 80343 1 T A scaffold21332 ScafM SNP 0001.scaffold00002 80357 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 80359 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 80365 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 80369 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 80386 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 80410 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 80429 1 T A scaffold21332 ScafM SNP 0001.scaffold00002 80703 1 G A scaffold21332 ScafM INDEL 0001.scaffold00002 80710 1 T . scaffold21332 ScafM INDEL 0001.scaffold00002 80739 1 G . scaffold21332 ScafM INDEL 0001.scaffold00002 80745 1 C . scaffold21332 ScafM SNP 0001.scaffold00002 80792 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 80815 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 80845 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 80853 1 G T scaffold21332 ScafM SNP 0001.scaffold00002 80867 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 81168 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 81195 1 T A scaffold21332 ScafM SNP 0001.scaffold00002 81198 1 A T scaffold21332 ScafM SNP 0001.scaffold00002 81219 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 81261 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 81264 1 G C scaffold21332 ScafM SNP 0001.scaffold00002 81266 1 T G scaffold21332 ScafM INDEL 0001.scaffold00002 81284 2 .. AG scaffold21332 ScafM SNP 0001.scaffold00002 81304 1 T A scaffold21332 ScafM SNP 0001.scaffold00002 81320 1 A C scaffold21332 ScafM SNP 0001.scaffold00002 81343 1 C T scaffold21332 ScafM INDEL 0001.scaffold00002 81413 6 ...... TGATCA scaffold21332 ScafM SNP 0001.scaffold00002 81431 1 G T scaffold21332 ScafM INDEL 0001.scaffold00002 81435 13 ............. TTTGGTTTAATAG scaffold21332 ScafM SNP 0001.scaffold00002 81495 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 81500 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 81502 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 81505 1 C A scaffold21332 ScafM SNP 0001.scaffold00002 82541 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 82577 1 G T scaffold21332 Both SNP 0001.scaffold00002 82731 1 T C scaffold21332 ScafM INDEL 0001.scaffold00002 82998 1 . C scaffold21332 ScafM SNP 0001.scaffold00002 83034 1 T G scaffold21332 ScafM SNP 0001.scaffold00002 83046 1 G T scaffold21332 ScafM INDEL 0001.scaffold00002 83071 1 C . scaffold21332 ScafM SNP 0001.scaffold00002 83098 1 A T scaffold21332 ScafM SNP 0001.scaffold00002 83113 2 CC AT scaffold21332 ScafM SNP 0001.scaffold00002 83151 1 T C scaffold21332 ScafM INDEL 0001.scaffold00002 83171 2 .. AT scaffold21332 ScafM INDEL 0001.scaffold00002 83189 2 .G AA scaffold21332 ScafM SNP 0001.scaffold00002 83230 1 A G scaffold21332 ScafM SNP 0001.scaffold00002 83268 1 G A scaffold21332 ScafM INDEL 0001.scaffold00002 83269 3 ... AAA scaffold21332 ScafM SNP 0001.scaffold00002 83270 1 G A scaffold21332 ScafM SNP 0001.scaffold00002 84021 1 A T scaffold21332 ScafM INDEL 0001.scaffold00002 84035 2 GG .. scaffold21332 ScafM SNP 0001.scaffold00002 84038 3 AAG TGT scaffold21332 ScafM SNP 0001.scaffold00002 84063 1 C A scaffold21332 ScafM SNP 0001.scaffold00002 84076 2 CA AG scaffold21332 ScafM SNP 0001.scaffold00002 84085 1 T C scaffold21332 ScafM SNP 0001.scaffold00002 84171 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 84223 1 G T scaffold21332 ScafM SNP 0001.scaffold00002 84232 1 C T scaffold21332 ScafM SNP 0001.scaffold00002 84249 1 T G scaffold21332 ScafM SNP 0001.scaffold00002 84262 1 A C scaffold21332 Both SNP 0001.scaffold00002 84309 1 T A scaffold21332 Both SNP 0001.scaffold00002 84357 1 C G scaffold21332 ScafM SNP 0001.scaffold00002 84367 1 A C scaffold21332 ReadM SNP 0001.scaffold00002 84441 1 G T - ReadM SNP 0001.scaffold00002 84583 1 C A - ReadM SNP 0001.scaffold00002 84591 1 G T - ReadM SNP 0001.scaffold00002 84714 1 A G - ReadM SNP 0001.scaffold00002 84844 1 G A - ReadM SNP 0001.scaffold00002 85368 1 G C - ReadM SNP 0001.scaffold00002 85395 1 C T - ReadM SNP 0001.scaffold00002 87873 1 G A - ReadM SNP 0001.scaffold00002 87908 1 A T - ReadM SNP 0001.scaffold00002 87987 1 T C - ReadM INDEL 0001.scaffold00002 88390 1 T . - ReadM SNP 0001.scaffold00002 88407 1 C T - ReadM SNP 0001.scaffold00002 88440 1 A T - ReadM SNP 0001.scaffold00002 90301 1 A C - ScafM SNP 0001.scaffold00002 90713 1 G C scaffold18317 ScafM SNP 0001.scaffold00002 90717 2 TT CC scaffold18317 ScafM SNP 0001.scaffold00002 90830 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 90874 2 GG AA scaffold18317 ScafM SNP 0001.scaffold00002 90940 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 90946 1 A T scaffold18317 Both SNP 0001.scaffold00002 91963 1 T C scaffold18317 ScafM INDEL 0001.scaffold00002 92058 2 TA .. scaffold18317 ScafM SNP 0001.scaffold00002 92081 1 T G scaffold18317 ScafM INDEL 0001.scaffold00002 92110 2 .. AA scaffold18317 ScafM SNP 0001.scaffold00002 92142 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 92195 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 92226 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 92272 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 92274 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 92281 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 92347 1 A G scaffold18317 Both SNP 0001.scaffold00002 92504 1 T A scaffold18317 Both SNP 0001.scaffold00002 92562 1 C T scaffold18317 Both SNP 0001.scaffold00002 92629 1 C A scaffold18317 Both SNP 0001.scaffold00002 92675 1 T C scaffold18317 ReadM INDEL 0001.scaffold00002 93670 2 .. AA - ReadM SNP 0001.scaffold00002 94521 1 C T - ReadM SNP 0001.scaffold00002 94797 1 T C - ScafM SNP 0001.scaffold00002 94858 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 94894 1 A G scaffold18317 ScafM INDEL 0001.scaffold00002 94931 7 ....... ACTGATA scaffold18317 Both SNP 0001.scaffold00002 95086 1 T C scaffold18317 ReadM SNP 0001.scaffold00002 95144 1 C T - ReadM SNP 0001.scaffold00002 95161 1 A T - ScafM SNP 0001.scaffold00002 95411 1 G A scaffold18317 ScafM INDEL 0001.scaffold00002 95419 4 TTAA .... scaffold18317 ScafM INDEL 0001.scaffold00002 95620 6 ...... ATTGCG scaffold18317 ScafM SNP 0001.scaffold00002 95835 1 G A scaffold18317 ScafM INDEL 0001.scaffold00002 95840 4 TTAA .... scaffold18317 ScafM SNP 0001.scaffold00002 95904 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 95940 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 95996 1 T G scaffold18317 ScafM SNP 0001.scaffold00002 96034 1 A C scaffold18317 ScafM INDEL 0001.scaffold00002 96081 18 .................. TATTAAATTATTCTATTT scaffold18317 ScafM INDEL 0001.scaffold00002 96084 4 .... CCCC scaffold18317 ScafM INDEL 0001.scaffold00002 96085 14 .............. CAAAAAAAAAAAAA scaffold18317 ScafM INDEL 0001.scaffold00002 96086 1 . G scaffold18317 ScafM SNP 0001.scaffold00002 96109 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 96161 1 A T scaffold18317 ReadM SNP 0001.scaffold00002 96347 1 C G - ScafM INDEL 0001.scaffold00002 97364 2 AA .C scaffold18317 ScafM SNP 0001.scaffold00002 97396 1 A C scaffold18317 ScafM SNP 0001.scaffold00002 97435 1 A C scaffold18317 ScafM SNP 0001.scaffold00002 97451 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 97458 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 97481 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 97487 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 97489 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 97536 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 97539 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 97576 1 A G scaffold18317 ReadM SNP 0001.scaffold00002 98010 1 A G - ReadM SNP 0001.scaffold00002 98013 1 A T - ReadM INDEL 0001.scaffold00002 98101 1 . A - Both SNP 0001.scaffold00002 98156 1 A G scaffold18317 Both SNP 0001.scaffold00002 98167 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 98192 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 98198 1 A C scaffold18317 Both SNP 0001.scaffold00002 98476 1 A G scaffold18317 Both INDEL 0001.scaffold00002 98490 2 .. AT scaffold18317 Both INDEL 0001.scaffold00002 98583 1 A . scaffold18317 ScafM SNP 0001.scaffold00002 98631 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 98639 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 98642 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 98655 1 C T scaffold18317 ScafM INDEL 0001.scaffold00002 98672 1 T . scaffold18317 ScafM SNP 0001.scaffold00002 98711 1 G A scaffold18317 ScafM INDEL 0001.scaffold00002 99127 10 .......... TATGACTTTT scaffold18317 ScafM SNP 0001.scaffold00002 99138 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 99176 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 99178 1 T G scaffold18317 ScafM INDEL 0001.scaffold00002 99229 4 .... TATA scaffold18317 ScafM SNP 0001.scaffold00002 99238 1 T C scaffold18317 ScafM INDEL 0001.scaffold00002 99288 1 T . scaffold18317 ScafM SNP 0001.scaffold00002 99350 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 99385 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 99389 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 99412 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 100700 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 100792 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 100797 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 100867 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 100888 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 101401 1 G A scaffold18317 ScafM INDEL 0001.scaffold00002 101417 6 ...... ATACCT scaffold18317 ScafM INDEL 0001.scaffold00002 101419 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 101425 1 T C scaffold18317 ScafM INDEL 0001.scaffold00002 101461 7 CCCCAGA ....... scaffold18317 ReadM SNP 0001.scaffold00002 102070 1 G A - ReadM SNP 0001.scaffold00002 102127 1 G T - ReadM SNP 0001.scaffold00002 102133 1 A G - ReadM SNP 0001.scaffold00002 102196 1 A G - ReadM SNP 0001.scaffold00002 102208 1 G A - ReadM SNP 0001.scaffold00002 102248 1 C T - ReadM SNP 0001.scaffold00002 102389 1 A G - ReadM SNP 0001.scaffold00002 102405 1 C T - ReadM SNP 0001.scaffold00002 102409 1 A T - ReadM SNP 0001.scaffold00002 102471 1 C T - ReadM SNP 0001.scaffold00002 102475 1 C T - ReadM SNP 0001.scaffold00002 102589 1 T G - ReadM INDEL 0001.scaffold00002 102616 1 . A - ReadM SNP 0001.scaffold00002 102665 1 A G - ReadM SNP 0001.scaffold00002 102702 1 A G - ReadM SNP 0001.scaffold00002 102710 1 G A - ReadM SNP 0001.scaffold00002 102864 1 G A - ReadM SNP 0001.scaffold00002 102898 1 G A - ReadM SNP 0001.scaffold00002 102999 1 T G - ReadM SNP 0001.scaffold00002 103289 1 G T - ReadM SNP 0001.scaffold00002 103313 1 G A - ReadM SNP 0001.scaffold00002 103343 1 G A - ReadM SNP 0001.scaffold00002 103381 1 G A - ReadM SNP 0001.scaffold00002 103533 1 G A - ReadM SNP 0001.scaffold00002 103577 1 C T - ReadM SNP 0001.scaffold00002 103608 1 C T - ReadM SNP 0001.scaffold00002 103618 1 A G - ReadM SNP 0001.scaffold00002 103637 1 C G - ReadM SNP 0001.scaffold00002 103729 1 G C - ReadM SNP 0001.scaffold00002 103870 1 C A - ReadM SNP 0001.scaffold00002 103940 1 A G - ReadM SNP 0001.scaffold00002 104044 1 A G - ReadM SNP 0001.scaffold00002 104184 1 T C - ReadM INDEL 0001.scaffold00002 104195 1 A . - ReadM SNP 0001.scaffold00002 104217 1 T C - ReadM SNP 0001.scaffold00002 104298 1 A G - ReadM SNP 0001.scaffold00002 104319 1 C T - ReadM SNP 0001.scaffold00002 104377 1 C T - ReadM SNP 0001.scaffold00002 104408 1 G T - ReadM SNP 0001.scaffold00002 104415 1 T C - ReadM SNP 0001.scaffold00002 104439 1 T C - ReadM SNP 0001.scaffold00002 104466 1 C T - ReadM SNP 0001.scaffold00002 104517 1 A T - ReadM SNP 0001.scaffold00002 104574 1 T C - ReadM SNP 0001.scaffold00002 104613 1 A G - ReadM SNP 0001.scaffold00002 104673 1 G A - ReadM INDEL 0001.scaffold00002 104814 1 A . - ReadM SNP 0001.scaffold00002 104839 1 T G - ReadM SNP 0001.scaffold00002 104956 1 T C - ReadM SNP 0001.scaffold00002 104977 1 T C - ReadM SNP 0001.scaffold00002 105004 1 T C - ReadM SNP 0001.scaffold00002 105096 1 T C - ReadM SNP 0001.scaffold00002 105136 1 C T - ReadM INDEL 0001.scaffold00002 105220 1 . T - ReadM SNP 0001.scaffold00002 105239 1 T C - ReadM SNP 0001.scaffold00002 105284 1 T C - ReadM SNP 0001.scaffold00002 105313 1 A C - ReadM SNP 0001.scaffold00002 105325 1 T C - ReadM SNP 0001.scaffold00002 105399 1 G A - ReadM SNP 0001.scaffold00002 105420 1 A T - ReadM SNP 0001.scaffold00002 105456 1 A G - ReadM SNP 0001.scaffold00002 105530 1 T G - ReadM SNP 0001.scaffold00002 105537 1 A G - ReadM SNP 0001.scaffold00002 105552 1 T C - ReadM SNP 0001.scaffold00002 105709 1 A T - ReadM SNP 0001.scaffold00002 105716 1 C G - ReadM SNP 0001.scaffold00002 105777 1 T C - ReadM SNP 0001.scaffold00002 105794 1 G A - ReadM SNP 0001.scaffold00002 105820 1 A G - ReadM SNP 0001.scaffold00002 105898 1 T C - ReadM SNP 0001.scaffold00002 105951 1 T C - ReadM SNP 0001.scaffold00002 105994 1 A G - ReadM SNP 0001.scaffold00002 106049 1 G A - ReadM SNP 0001.scaffold00002 106140 1 T C - ReadM SNP 0001.scaffold00002 106178 1 A G - ReadM SNP 0001.scaffold00002 106243 1 G A - ReadM SNP 0001.scaffold00002 106253 1 A G - ReadM SNP 0001.scaffold00002 106322 1 T C - ScafM SNP 0001.scaffold00002 106341 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 106359 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 106363 1 G T scaffold18317 ScafM SNP 0001.scaffold00002 106366 1 A G scaffold18317 Both SNP 0001.scaffold00002 106395 1 C T scaffold18317 ReadM INDEL 0001.scaffold00002 106520 1 T . - ReadM SNP 0001.scaffold00002 106557 1 T C - ReadM SNP 0001.scaffold00002 106637 1 T C - ReadM SNP 0001.scaffold00002 106674 1 A T - ScafM SNP 0001.scaffold00002 107012 1 G A scaffold18317 ScafM INDEL 0001.scaffold00002 107016 1 . C scaffold18317 ScafM SNP 0001.scaffold00002 107081 1 G A scaffold18317 Both SNP 0001.scaffold00002 107104 1 A T scaffold18317 ReadM SNP 0001.scaffold00002 107135 1 G C - ScafM INDEL 0001.scaffold00002 108008 1 C . scaffold18317 ScafM SNP 0001.scaffold00002 108011 1 G C scaffold18317 ScafM INDEL 0001.scaffold00002 108012 1 . A scaffold18317 ScafM SNP 0001.scaffold00002 108043 1 C G scaffold18317 ReadM SNP 0001.scaffold00002 108116 1 A C - ReadM SNP 0001.scaffold00002 108132 1 T C - ReadM SNP 0001.scaffold00002 108200 1 G C - ScafM INDEL 0001.scaffold00002 108397 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 108414 1 G C scaffold18317 ScafM SNP 0001.scaffold00002 108430 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 108461 1 T C scaffold18317 Both SNP 0001.scaffold00002 108740 1 C G scaffold18317 Both INDEL 0001.scaffold00002 109179 1 . G scaffold18317 Both SNP 0001.scaffold00002 109205 1 T C scaffold18317 Both SNP 0001.scaffold00002 109220 1 C A scaffold18317 ScafM SNP 0001.scaffold00002 109276 1 A C scaffold18317 ScafM SNP 0001.scaffold00002 109300 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 109306 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 109414 1 T A scaffold18317 ScafM INDEL 0001.scaffold00002 109506 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 109522 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 109567 1 G A scaffold18317 Both SNP 0001.scaffold00002 109690 1 A G scaffold18317 ScafM SNP 0001.scaffold00002 109770 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 109788 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 109845 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 109848 1 C T scaffold18317 ScafM SNP 0001.scaffold00002 109909 1 A G scaffold18317 ScafM INDEL 0001.scaffold00002 109941 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 109948 1 A C scaffold18317 ScafM SNP 0001.scaffold00002 110035 1 G A scaffold18317 ScafM SNP 0001.scaffold00002 110049 1 T C scaffold18317 ScafM INDEL 0001.scaffold00002 110067 1 . G scaffold18317 ScafM SNP 0001.scaffold00002 110088 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 110098 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 110109 1 G A scaffold18317 Both SNP 0001.scaffold00002 110258 1 T C scaffold18317 ScafM SNP 0001.scaffold00002 110376 1 C G scaffold18317 ScafM INDEL 0001.scaffold00002 110380 4 AAGC .... scaffold18317 ScafM INDEL 0001.scaffold00002 110408 4 TATA .... scaffold18317 Both INDEL 0001.scaffold00002 110431 1 . C scaffold18317 ScafM INDEL 0001.scaffold00002 110557 4 .... AGAT scaffold18317 Both SNP 0001.scaffold00002 110607 1 A T scaffold18317 ScafM SNP 0001.scaffold00002 110826 1 A T scaffold18317 ScafM INDEL 0001.scaffold00002 110901 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 110903 1 C T scaffold18317 ScafM INDEL 0001.scaffold00002 110907 1 . T scaffold18317 ScafM SNP 0001.scaffold00002 110920 1 T G scaffold18317 ScafM INDEL 0001.scaffold00002 110987 1 . T scaffold18317 ScafM INDEL 0001.scaffold00002 111549 25 ......................... CTTATATATATGAATAATTTTCGTT scaffold18317 ScafM SNP 0001.scaffold00002 112905 1 T A scaffold18317 ScafM SNP 0001.scaffold00002 112931 1 A T scaffold18317 ScafM INDEL 0001.scaffold00002 113466 83 TATTGTTTAATGAAAAATAGTGAGAATCACATACATAAATAAATTGGAATTTAGTGTACAAAAAAGAAGTTAATTAGACAAAA ................................................................................... scaffold18317 ScafM INDEL 0001.scaffold00002 114595 1 A . scaffold18317 ReadM SNP 0001.scaffold00002 114975 1 C T - ReadM SNP 0001.scaffold00002 115088 1 A T - ReadM SNP 0001.scaffold00002 115441 1 A C - Both INDEL 0001.scaffold00002 116203 1 T . scaffold18317 Both SNP 0001.scaffold00002 116266 1 G C scaffold18317 ReadM SNP 0001.scaffold00002 116471 1 T C - ReadM SNP 0001.scaffold00002 116799 1 A T - ReadM INDEL 0001.scaffold00002 117962 1 . A - ReadM INDEL 0001.scaffold00002 118831 1 T . - Both INDEL 0001.scaffold00002 120400 3 ATT ... scaffold18317 Both SNP 0001.scaffold00002 120551 1 T C scaffold18317 Both INDEL 0001.scaffold00002 121851 1 . A scaffold18317 ScafM SNP 0001.scaffold00002 127647 1 C A scaffold22671 ScafM SNP 0001.scaffold00002 148929 1 G A scaffold22671 ScafM SNP 0001.scaffold00002 148931 1 A G scaffold22671 Both SNP 0001.scaffold00002 156409 1 C T scaffold22671 ScafM SNP 0001.scaffold00002 162696 1 T A scaffold2012 ScafM SNP 0001.scaffold00002 167895 1 A G scaffold1094 ScafM SNP 0001.scaffold00002 167898 1 A G scaffold1094 ScafM INDEL 0001.scaffold00002 167929 1 . T scaffold1094 ScafM SNP 0001.scaffold00002 167940 1 C T scaffold1094 ScafM SNP 0001.scaffold00002 168064 1 G T scaffold1094 ScafM SNP 0001.scaffold00002 168102 1 C T scaffold1094 ScafM SNP 0001.scaffold00002 168105 1 T C scaffold1094 ScafM SNP 0001.scaffold00002 168119 1 G A scaffold1094 ScafM INDEL 0001.scaffold00002 174051 1 . T scaffold2012 ScafM INDEL 0001.scaffold00002 176775 24 ........................ ACGAACAAGTTTAGTAAAAATCAG scaffold2012 ScafM INDEL 0001.scaffold00002 176776 4 .... TAAA scaffold2012 ScafM INDEL 0001.scaffold00002 176785 17 ................. ATCTAACATCTAAACTC scaffold2012 ScafM INDEL 0001.scaffold00002 176786 7 ....... GGGCAAA scaffold2012 ScafM SNP 0001.scaffold00002 183728 1 T G scaffold20584 ScafM INDEL 0001.scaffold00002 189711 13 ............. GTTGGGGGGGGGG scaffold20584 Both SNP 0002.scaffold00003 6722 1 C G scaffold6977 ReadM SNP 0002.scaffold00003 22182 1 T A - ScafM SNP 0002.scaffold00003 49881 1 T G scaffold37919 ScafM INDEL 0002.scaffold00003 84123 4 GGTG .... scaffold6692 ScafM SNP 0002.scaffold00003 92658 1 C T scaffold15293 ScafM INDEL 0002.scaffold00003 92903 1 . G scaffold15293 ScafM SNP 0002.scaffold00003 93011 1 T A scaffold15293 ScafM INDEL 0002.scaffold00003 93013 3 ... AGT scaffold15293 ScafM SNP 0002.scaffold00003 93501 1 G A scaffold15293 ScafM INDEL 0002.scaffold00003 93511 2 CA .. scaffold15293 ScafM SNP 0002.scaffold00003 93536 1 T C scaffold15293 ScafM SNP 0002.scaffold00003 94605 1 A C scaffold15293 ScafM INDEL 0002.scaffold00003 94750 4 .... CCTT scaffold15293 ScafM SNP 0002.scaffold00003 94752 1 C T scaffold15293 ScafM SNP 0002.scaffold00003 94782 1 G T scaffold15293 ScafM INDEL 0002.scaffold00003 94806 1 . T scaffold15293 ScafM INDEL 0002.scaffold00003 94816 1 T . scaffold15293 ScafM SNP 0002.scaffold00003 94828 1 A C scaffold15293 Both SNP 0002.scaffold00003 94950 1 T A scaffold15293 ScafM SNP 0002.scaffold00003 94981 1 G A scaffold15293 ScafM SNP 0002.scaffold00003 95012 1 A T scaffold15293 ReadM SNP 0002.scaffold00003 95123 1 C A - ReadM SNP 0002.scaffold00003 95156 1 A C - ReadM SNP 0002.scaffold00003 95185 1 T C - ReadM SNP 0002.scaffold00003 95293 1 T G - ReadM SNP 0002.scaffold00003 95338 1 T C - ReadM SNP 0002.scaffold00003 95347 1 T C - ReadM SNP 0002.scaffold00003 95405 1 A G - ReadM SNP 0002.scaffold00003 95431 1 G A - ReadM SNP 0002.scaffold00003 95596 1 C T - ReadM SNP 0002.scaffold00003 95624 1 T C - ReadM SNP 0002.scaffold00003 95744 1 G A - ReadM SNP 0002.scaffold00003 95750 1 T C - ReadM SNP 0002.scaffold00003 95795 1 T G - ScafM SNP 0002.scaffold00003 99409 1 G T scaffold18608 ScafM INDEL 0002.scaffold00003 99425 1 G . scaffold18608 ScafM INDEL 0002.scaffold00003 99428 1 T . scaffold18608 ScafM SNP 0002.scaffold00003 99462 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 99543 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 99685 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 99689 1 T A scaffold18608 ScafM SNP 0002.scaffold00003 99746 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 99773 2 AA CT scaffold18608 ScafM INDEL 0002.scaffold00003 99776 2 .. TA scaffold18608 ScafM SNP 0002.scaffold00003 99799 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 99802 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 99820 1 G T scaffold18608 ScafM SNP 0002.scaffold00003 99873 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 99913 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 99928 1 G T scaffold18608 ScafM SNP 0002.scaffold00003 99930 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 99965 2 GC AT scaffold18608 ScafM SNP 0002.scaffold00003 99975 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100036 1 C A scaffold18608 ScafM SNP 0002.scaffold00003 100131 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 100184 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 100219 1 A G scaffold18608 ScafM SNP 0002.scaffold00003 100291 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100328 1 G T scaffold18608 ScafM SNP 0002.scaffold00003 100357 1 C G scaffold18608 ScafM SNP 0002.scaffold00003 100382 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100425 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 100454 1 A T scaffold18608 ScafM SNP 0002.scaffold00003 100509 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 100521 1 G C scaffold18608 ScafM SNP 0002.scaffold00003 100524 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100544 1 C A scaffold18608 ScafM SNP 0002.scaffold00003 100550 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100568 1 T C scaffold18608 ScafM INDEL 0002.scaffold00003 100580 2 .A GT scaffold18608 ScafM SNP 0002.scaffold00003 100663 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 100761 1 C G scaffold18608 ScafM SNP 0002.scaffold00003 100838 1 A G scaffold18608 ScafM SNP 0002.scaffold00003 100849 1 A T scaffold18608 ScafM SNP 0002.scaffold00003 101025 1 A T scaffold18608 ScafM INDEL 0002.scaffold00003 101094 2 AT .. scaffold18608 ScafM SNP 0002.scaffold00003 101129 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 101142 1 C A scaffold18608 ScafM SNP 0002.scaffold00003 101194 1 A T scaffold18608 ScafM SNP 0002.scaffold00003 101213 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101229 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 101243 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101248 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101259 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 101574 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101576 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 101585 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101606 1 G T scaffold18608 ScafM INDEL 0002.scaffold00003 101622 1 . A scaffold18608 ScafM SNP 0002.scaffold00003 101700 1 C T scaffold18608 ScafM SNP 0002.scaffold00003 101770 1 G A scaffold18608 ScafM SNP 0002.scaffold00003 101799 1 A G scaffold18608 ScafM SNP 0002.scaffold00003 101819 1 T C scaffold18608 ScafM SNP 0002.scaffold00003 101896 1 T G scaffold18608 ScafM SNP 0002.scaffold00003 101905 1 A C scaffold18608 ScafM SNP 0002.scaffold00003 101931 1 C T scaffold18608 ScafM INDEL 0002.scaffold00003 102026 2 TT .G scaffold18608 ScafM SNP 0002.scaffold00003 102101 1 C G scaffold18608 ScafM SNP 0002.scaffold00003 113504 1 C T scaffold1156 ScafM SNP 0002.scaffold00003 113872 1 A T scaffold12626 ScafM SNP 0002.scaffold00003 113918 1 T G scaffold12626 ScafM SNP 0002.scaffold00003 113926 1 C G scaffold12626 ScafM SNP 0002.scaffold00003 114001 1 G A scaffold12626 ScafM SNP 0002.scaffold00003 114040 1 A G scaffold12626 ScafM SNP 0002.scaffold00003 114058 1 G T scaffold12626 ScafM INDEL 0002.scaffold00003 114108 1 T . scaffold12626 ScafM INDEL 0002.scaffold00003 114164 1 A . scaffold12626 ScafM SNP 0002.scaffold00003 114225 1 C G scaffold12626 ScafM SNP 0002.scaffold00003 114324 1 A T scaffold12626 ScafM SNP 0002.scaffold00003 114330 1 C T scaffold12626 ScafM SNP 0002.scaffold00003 114370 1 A G scaffold12626 ScafM SNP 0002.scaffold00003 114396 1 G A scaffold12626 ScafM SNP 0002.scaffold00003 114564 1 C A scaffold12626 ScafM SNP 0002.scaffold00003 114654 1 G A scaffold12626 ScafM SNP 0002.scaffold00003 124103 1 A G scaffold9077 ScafM SNP 0002.scaffold00003 124114 2 CC TT scaffold9077 ScafM SNP 0002.scaffold00003 124137 1 C T scaffold9077 ScafM SNP 0002.scaffold00003 124158 1 C T scaffold9077 ScafM SNP 0002.scaffold00003 124189 1 T G scaffold9077 ScafM SNP 0002.scaffold00003 124210 1 G A scaffold9077 ScafM SNP 0002.scaffold00003 124219 1 T A scaffold9077 ScafM SNP 0002.scaffold00003 124251 1 C T scaffold9077 ScafM SNP 0002.scaffold00003 124262 1 A C scaffold9077 ScafM SNP 0002.scaffold00003 124272 1 A G scaffold9077 ScafM SNP 0002.scaffold00003 124279 1 T G scaffold9077 ScafM SNP 0002.scaffold00003 124299 1 G A scaffold9077 ScafM INDEL 0002.scaffold00003 135444 4 .... AAAA scaffold8265 ScafM SNP 0002.scaffold00003 135446 1 G A scaffold8265 ScafM SNP 0002.scaffold00003 135449 1 T C scaffold8265 ScafM SNP 0002.scaffold00003 135459 1 C T scaffold8265 ScafM SNP 0002.scaffold00003 135464 1 T A scaffold8265 ScafM SNP 0002.scaffold00003 135533 1 G T scaffold8265 ReadM INDEL 0002.scaffold00003 136541 1 T . - ScafM SNP 0002.scaffold00003 155494 1 A G scaffold31039 ScafM SNP 0002.scaffold00003 155550 1 A G scaffold31039 ScafM SNP 0002.scaffold00003 155592 1 A T scaffold31039 ScafM SNP 0002.scaffold00003 162418 1 G A scaffold15237 ScafM SNP 0002.scaffold00003 162420 1 C G scaffold15237 ScafM INDEL 0002.scaffold00003 169553 2 .. AA scaffold15237 ScafM SNP 0002.scaffold00003 189576 1 G A scaffold2138 ScafM SNP 0002.scaffold00003 189610 1 A G scaffold2138 ScafM SNP 0002.scaffold00003 189696 2 GA AT scaffold2138 ScafM SNP 0002.scaffold00003 189738 1 G T scaffold2138 ScafM SNP 0002.scaffold00003 189812 1 T C scaffold2138 ScafM SNP 0002.scaffold00003 189838 1 C A scaffold2138 ScafM SNP 0002.scaffold00003 189849 1 C T scaffold2138 ScafM SNP 0002.scaffold00003 189870 1 T G scaffold2138 ScafM SNP 0002.scaffold00003 189957 1 C T scaffold2138 ScafM SNP 0002.scaffold00003 190164 2 TC CT scaffold16397 ScafM INDEL 0002.scaffold00003 190243 1 . T scaffold16397 ScafM INDEL 0002.scaffold00003 190286 2 .. TT scaffold16397 ScafM SNP 0002.scaffold00003 190292 1 T A scaffold16397 ScafM INDEL 0002.scaffold00003 190308 1 . G scaffold16397 ScafM SNP 0002.scaffold00003 190311 1 A T scaffold16397 ScafM SNP 0002.scaffold00003 190521 1 G C scaffold16397 ScafM SNP 0002.scaffold00003 190526 1 C G scaffold16397 ScafM SNP 0002.scaffold00003 193689 1 T C scaffold1670 ScafM SNP 0002.scaffold00003 193907 1 C A scaffold1670 ScafM SNP 0002.scaffold00003 193961 1 T C scaffold1670 ScafM SNP 0002.scaffold00003 231814 1 G T scaffold1566 ScafM INDEL 0002.scaffold00003 232516 1 . T scaffold1566 Both SNP 0002.scaffold00003 234065 1 T A scaffold1566 Both SNP 0002.scaffold00003 253042 1 C T scaffold1566 ScafM INDEL 0002.scaffold00003 263725 1 . T scaffold1566 ReadM INDEL 0002.scaffold00003 282719 1 . A - ReadM INDEL 0002.scaffold00003 282826 1 . A - ScafM SNP 0002.scaffold00003 334459 1 C T scaffold19694 ScafM SNP 0002.scaffold00003 334522 1 A T scaffold19694 ScafM INDEL 0002.scaffold00003 346574 41 ......................................... ATTTCTGGACGTTTGTGCTATTTAACTTACGACTTTTTTAC scaffold15001 ScafM INDEL 0002.scaffold00003 346588 3 ... AAA scaffold15001 ScafM SNP 0002.scaffold00003 365839 1 G A scaffold15001 ScafM INDEL 0002.scaffold00003 365841 1 . A scaffold15001 ScafM INDEL 0002.scaffold00003 365842 2 .G AT scaffold15001 ScafM INDEL 0002.scaffold00003 365846 2 .. AA scaffold15001 ScafM SNP 0002.scaffold00003 365847 1 G A scaffold15001 ScafM SNP 0002.scaffold00003 365851 1 T G scaffold15001 ScafM SNP 0002.scaffold00003 365856 1 G A scaffold15001 ScafM INDEL 0002.scaffold00003 365858 2 TC .. scaffold15001 ReadM SNP 0002.scaffold00003 372913 1 T C - ReadM INDEL 0002.scaffold00003 386926 2 AG .. - ScafM SNP 0002.scaffold00003 386927 1 G A scaffold13309 ReadM SNP 0002.scaffold00003 429106 1 A C - ScafM INDEL 0002.scaffold00003 431290 33 ................................. TTTTTTTTGACCTCTCAATTTTTTTTTTTTTTT scaffold14160 ScafM INDEL 0002.scaffold00003 431292 1 . A scaffold14160 ReadM SNP 0002.scaffold00003 478699 1 C T - ScafM INDEL 0002.scaffold00003 486849 49 ................................................. TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold455 ScafM INDEL 0002.scaffold00003 507848 1 T . scaffold455 ScafM SNP 0002.scaffold00003 510544 1 A C scaffold455 ScafM INDEL 0002.scaffold00003 510966 1 . A scaffold455 ScafM SNP 0002.scaffold00003 520616 1 G A scaffold455 ScafM INDEL 0002.scaffold00003 527785 1 T . scaffold455 ScafM INDEL 0002.scaffold00003 534886 2 AA .. scaffold11417 ScafM SNP 0002.scaffold00003 534958 1 C T scaffold11417 ScafM SNP 0002.scaffold00003 534963 1 A C scaffold11417 ScafM SNP 0002.scaffold00003 534965 1 T C scaffold11417 Both SNP 0002.scaffold00003 549381 1 G A scaffold37305 ScafM INDEL 0002.scaffold00003 558820 4 .... CCCC scaffold37305 ScafM SNP 0002.scaffold00003 559108 1 T C scaffold37305 ScafM INDEL 0002.scaffold00003 559113 4 TTAA ..CC scaffold37305 ScafM SNP 0002.scaffold00003 568931 1 G T scaffold506 ScafM INDEL 0002.scaffold00003 569009 1 . A scaffold13369 ScafM INDEL 0002.scaffold00003 569011 1 . A scaffold13369 ScafM SNP 0002.scaffold00003 569014 1 G A scaffold13369 ScafM INDEL 0002.scaffold00003 569015 3 ... TTC scaffold13369 ScafM SNP 0002.scaffold00003 569079 1 A G scaffold13369 ScafM SNP 0002.scaffold00003 569083 2 TC CT scaffold13369 ScafM SNP 0002.scaffold00003 569096 1 C T scaffold13369 ScafM SNP 0002.scaffold00003 569129 1 A T scaffold13369 ScafM INDEL 0002.scaffold00003 569315 1 . T scaffold7809 ScafM SNP 0002.scaffold00003 569318 1 T C scaffold7809 ScafM SNP 0002.scaffold00003 569324 1 G A scaffold7809 ScafM SNP 0002.scaffold00003 569326 1 T C scaffold7809 ScafM SNP 0002.scaffold00003 569336 1 A C scaffold7809 ScafM SNP 0002.scaffold00003 569338 2 GT AA scaffold7809 ScafM SNP 0002.scaffold00003 569347 1 T C scaffold7809 ScafM SNP 0002.scaffold00003 569350 1 A G scaffold7809 ScafM SNP 0002.scaffold00003 569389 1 A C scaffold7809 ScafM SNP 0002.scaffold00003 569415 1 G A scaffold7809 ScafM SNP 0002.scaffold00003 569420 1 A G scaffold7809 ScafM SNP 0002.scaffold00003 569425 1 C T scaffold7809 ScafM SNP 0002.scaffold00003 569437 1 T A scaffold7809 ScafM INDEL 0002.scaffold00003 569447 2 .. AA scaffold7809 ScafM SNP 0002.scaffold00003 569465 1 C T scaffold7809 ScafM SNP 0002.scaffold00003 570323 1 T G scaffold506 ReadM SNP 0002.scaffold00003 576610 1 G A - ReadM INDEL 0002.scaffold00003 606614 1 A . - Both INDEL 0002.scaffold00003 624529 1 . A scaffold42282 ScafM SNP 0002.scaffold00003 722311 1 C A scaffold2906 ScafM INDEL 0002.scaffold00003 740377 5 CTCCC ..... scaffold8636 ScafM INDEL 0002.scaffold00003 740402 14 GGGCTAGAATGATT .............. scaffold8636 ReadM INDEL 0002.scaffold00003 746836 1 . A - ScafM SNP 0002.scaffold00003 753693 1 A G scaffold6 ScafM SNP 0002.scaffold00003 753718 1 T C scaffold6 ReadM INDEL 0002.scaffold00003 767925 1 . A - ReadM INDEL 0002.scaffold00003 771219 1 A . - ScafM SNP 0002.scaffold00003 797617 1 T C scaffold22134 ScafM SNP 0002.scaffold00003 797619 1 G A scaffold22134 ScafM SNP 0002.scaffold00003 797664 1 C A scaffold22134 ScafM INDEL 0002.scaffold00003 797669 1 T . scaffold22134 ScafM INDEL 0002.scaffold00003 797704 4 .... GACT scaffold22134 ScafM INDEL 0002.scaffold00003 797705 4 .... CGCA scaffold22134 ScafM INDEL 0002.scaffold00003 797707 4 .... ATAC scaffold22134 ScafM INDEL 0002.scaffold00003 797709 5 ..... TATTG scaffold22134 ScafM SNP 0002.scaffold00003 797718 1 C T scaffold22134 ScafM SNP 0002.scaffold00003 797739 1 G C scaffold22134 ScafM SNP 0002.scaffold00003 797747 1 T C scaffold22134 ScafM SNP 0002.scaffold00003 797802 1 A C scaffold22134 ScafM SNP 0002.scaffold00003 797805 1 A G scaffold22134 ScafM SNP 0002.scaffold00003 797822 1 C A scaffold22134 ScafM INDEL 0002.scaffold00003 797858 1 . G scaffold22134 ScafM SNP 0002.scaffold00003 797873 1 T C scaffold22134 ScafM SNP 0002.scaffold00003 797891 1 G C scaffold22134 ScafM SNP 0002.scaffold00003 797958 1 T G scaffold22134 ScafM SNP 0002.scaffold00003 798003 1 G A scaffold22134 ScafM SNP 0002.scaffold00003 798031 1 G T scaffold22134 ScafM SNP 0002.scaffold00003 798040 1 A G scaffold22134 ScafM SNP 0002.scaffold00003 798201 1 C T scaffold21391 ScafM SNP 0002.scaffold00003 798241 1 T G scaffold21391 ScafM SNP 0002.scaffold00003 798244 1 C T scaffold21391 ScafM SNP 0002.scaffold00003 798247 1 A T scaffold21391 ScafM SNP 0002.scaffold00003 798270 1 A T scaffold21391 ScafM SNP 0002.scaffold00003 798353 1 A T scaffold21391 ScafM SNP 0002.scaffold00003 798373 1 A G scaffold21391 ScafM SNP 0002.scaffold00003 798449 1 G A scaffold21391 ScafM SNP 0002.scaffold00003 798470 1 A C scaffold21391 ScafM SNP 0002.scaffold00003 798544 1 G T scaffold21391 ScafM SNP 0002.scaffold00003 798687 1 A T scaffold21391 ScafM SNP 0002.scaffold00003 798748 1 T C scaffold21391 ScafM SNP 0002.scaffold00003 798752 1 G A scaffold21391 ScafM SNP 0002.scaffold00003 798827 1 A G scaffold21391 ScafM SNP 0002.scaffold00003 798830 1 T C scaffold21391 ScafM SNP 0002.scaffold00003 798864 1 C T scaffold21391 Both SNP 0002.scaffold00003 829360 1 A C scaffold6350 ScafM INDEL 0002.scaffold00003 848943 1 . A scaffold45034 ScafM SNP 0002.scaffold00003 885499 1 G A scaffold16881 ScafM INDEL 0002.scaffold00003 899565 1 . A scaffold16881 Both SNP 0002.scaffold00003 910731 1 A T scaffold16881 ScafM SNP 0002.scaffold00003 920096 1 A C scaffold6934 ScafM SNP 0002.scaffold00003 920099 1 C T scaffold6934 Both SNP 0002.scaffold00003 945715 1 C T scaffold15736 ScafM SNP 0002.scaffold00003 947887 1 G C scaffold15736 ScafM INDEL 0002.scaffold00003 950116 11 ACATGGCGAGT ........... scaffold15736 ScafM SNP 0002.scaffold00003 950153 1 G A scaffold15736 ScafM SNP 0002.scaffold00003 950401 1 G A scaffold15736 ScafM SNP 0002.scaffold00003 950406 1 A G scaffold15736 ScafM SNP 0002.scaffold00003 950480 1 G C scaffold15736 ScafM INDEL 0002.scaffold00003 950682 11 ........... GGAGTCTAGAC scaffold15736 ScafM INDEL 0002.scaffold00003 950723 7 AAAAAAA ......G scaffold15736 ScafM SNP 0002.scaffold00003 950744 1 C A scaffold15736 ScafM INDEL 0002.scaffold00003 950746 5 CCCCC .TTGG scaffold15736 ScafM SNP 0002.scaffold00003 950752 2 AA CC scaffold15736 ScafM SNP 0002.scaffold00003 950755 3 GGG ACC scaffold15736 ScafM SNP 0002.scaffold00003 950761 2 TT CG scaffold15736 ScafM INDEL 0002.scaffold00003 950763 5 .TCGT AAAAA scaffold15736 ScafM SNP 0002.scaffold00003 950769 3 GAT CTA scaffold15736 ScafM INDEL 0002.scaffold00003 995533 2 AA .. scaffold15736 ScafM SNP 0002.scaffold00003 996266 1 A G scaffold15736 ScafM INDEL 0002.scaffold00003 996533 26 .......................... TTTTTTTTTTTTTTTTTTTTTTTTTT scaffold15736 ScafM INDEL 0002.scaffold00003 1007429 17 ................. CCCCCCCCCCCCCCCCC scaffold15736 ReadM SNP 0002.scaffold00003 1008744 1 G T - ReadM SNP 0002.scaffold00003 1018042 1 G T - ScafM INDEL 0002.scaffold00003 1027781 1 . A scaffold5992 ScafM INDEL 0002.scaffold00003 1060379 1 . G scaffold5992 ScafM INDEL 0002.scaffold00003 1061946 1 . A scaffold5992 ScafM INDEL 0002.scaffold00003 1064239 2 CC .. scaffold12358 ScafM INDEL 0002.scaffold00003 1064295 1 . T scaffold12358 ScafM INDEL 0002.scaffold00003 1066473 1 . T scaffold12358 ReadM INDEL 0002.scaffold00003 1086640 1 . A - ReadM INDEL 0002.scaffold00003 1087746 1 T . - ScafM SNP 0002.scaffold00003 1165201 1 T C scaffold7069 ScafM INDEL 0002.scaffold00003 1182441 11 ........... CCCCCCCCCCC scaffold2275 ReadM INDEL 0002.scaffold00003 1203287 1 . T - ScafM SNP 0002.scaffold00003 1210326 1 T C scaffold3039 ScafM SNP 0002.scaffold00003 1210339 1 C T scaffold3039 ScafM SNP 0002.scaffold00003 1210352 1 C T scaffold3039 ScafM INDEL 0002.scaffold00003 1210358 3 ATA ... scaffold3039 ScafM SNP 0002.scaffold00003 1210367 1 C T scaffold3039 ScafM SNP 0002.scaffold00003 1210372 2 TC CT scaffold3039 ScafM SNP 0002.scaffold00003 1210381 2 TC CA scaffold3039 ScafM SNP 0002.scaffold00003 1210390 1 T C scaffold3039 ScafM SNP 0002.scaffold00003 1210407 1 C T scaffold3039 ScafM INDEL 0002.scaffold00003 1210459 1 A . scaffold3039 ScafM INDEL 0002.scaffold00003 1210496 1 G . scaffold3039 ScafM SNP 0002.scaffold00003 1210498 1 G T scaffold3039 ScafM INDEL 0002.scaffold00003 1210519 1 A . scaffold3039 ScafM SNP 0002.scaffold00003 1210533 1 C A scaffold3039 ScafM INDEL 0002.scaffold00003 1210538 1 . T scaffold3039 ScafM SNP 0002.scaffold00003 1210545 1 A G scaffold3039 ScafM SNP 0002.scaffold00003 1210577 1 G T scaffold3039 ScafM INDEL 0002.scaffold00003 1220053 1 G . scaffold1447 ReadM SNP 0002.scaffold00003 1222395 1 A T - ScafM SNP 0002.scaffold00003 1251729 2 TT CC scaffold801 ReadM SNP 0002.scaffold00003 1270477 1 G A - ScafM INDEL 0002.scaffold00003 1297960 1 . A scaffold9695 ScafM INDEL 0002.scaffold00003 1323338 52 TACAAGGAAACTTCTTCTTTTTGTCACATATCATACCATGAAGTTCCCCCCC .................................................... scaffold9695 ScafM INDEL 0002.scaffold00003 1323403 2 CT .. scaffold9695 ScafM SNP 0002.scaffold00003 1362854 1 T G scaffold3224 ReadM INDEL 0002.scaffold00003 1362956 1 . A - ScafM INDEL 0002.scaffold00003 1362956 4 .... AAAA scaffold3224 ScafM SNP 0002.scaffold00003 1400510 1 T C scaffold5403 ScafM SNP 0002.scaffold00003 1400617 1 T C scaffold5403 ScafM SNP 0002.scaffold00003 1400825 1 C T scaffold5403 ScafM SNP 0002.scaffold00003 1400833 1 A T scaffold5403 ScafM SNP 0002.scaffold00003 1400970 1 A G scaffold5403 ScafM SNP 0002.scaffold00003 1401057 1 T C scaffold5403 ScafM SNP 0002.scaffold00003 1401166 1 T A scaffold5403 ScafM SNP 0002.scaffold00003 1401281 2 GT AA scaffold5403 ScafM SNP 0002.scaffold00003 1431503 1 C A scaffold750 ScafM SNP 0002.scaffold00003 1431506 1 C T scaffold750 ScafM SNP 0002.scaffold00003 1431555 1 A G scaffold750 ScafM SNP 0002.scaffold00003 1431604 1 A C scaffold750 ScafM SNP 0002.scaffold00003 1431607 1 G A scaffold750 ScafM INDEL 0002.scaffold00003 1431609 1 A . scaffold750 ScafM SNP 0002.scaffold00003 1431613 2 AA TG scaffold750 ScafM SNP 0002.scaffold00003 1431635 1 C T scaffold750 ReadM SNP 0002.scaffold00003 1438775 1 C T - ScafM SNP 0002.scaffold00003 1443151 1 C T scaffold750 ReadM SNP 0003.scaffold00019 2527 1 T C - ReadM SNP 0003.scaffold00019 11327 1 T C - ReadM SNP 0003.scaffold00019 11832 1 A G - ScafM INDEL 0003.scaffold00019 12886 29 ............................. ATTGCTCGTCGTTTTCTTCGATCTACGCA scaffold1115 ScafM INDEL 0003.scaffold00019 13262 1 . T scaffold1115 ReadM SNP 0003.scaffold00019 19556 1 C G - ReadM SNP 0003.scaffold00019 22605 1 C T - ReadM SNP 0003.scaffold00019 23928 1 C T - ReadM INDEL 0003.scaffold00019 36899 1 . T - ReadM INDEL 0003.scaffold00019 45710 1 A . - ScafM INDEL 0003.scaffold00019 48798 1 A . scaffold1115 ReadM SNP 0003.scaffold00019 66419 1 A G - ReadM SNP 0003.scaffold00019 66743 1 T A - ReadM SNP 0003.scaffold00019 69982 1 G A - ReadM SNP 0003.scaffold00019 71608 1 G A - ReadM SNP 0003.scaffold00019 78510 1 C T - ReadM SNP 0003.scaffold00019 84194 1 A G - Both SNP 0003.scaffold00019 87293 1 G A scaffold1115 ReadM SNP 0003.scaffold00019 94320 1 T A - Both SNP 0003.scaffold00019 101674 1 T A scaffold1115 ReadM SNP 0003.scaffold00019 102854 1 C G - ReadM SNP 0003.scaffold00019 105710 1 A T - ReadM SNP 0003.scaffold00019 108730 1 G A - ReadM SNP 0003.scaffold00019 112120 1 C T - Both SNP 0003.scaffold00019 113277 1 G C scaffold1115 ReadM SNP 0003.scaffold00019 115622 1 A T - ReadM SNP 0003.scaffold00019 115867 1 T C - Both SNP 0003.scaffold00019 119038 1 C G scaffold1115 ReadM INDEL 0003.scaffold00019 125252 1 . T - ReadM INDEL 0003.scaffold00019 128779 1 G . - ScafM SNP 0003.scaffold00019 133449 1 T C scaffold1115 ReadM SNP 0003.scaffold00019 137260 1 C T - ReadM SNP 0003.scaffold00019 145675 1 T C - Both SNP 0003.scaffold00019 151492 1 T C scaffold1115 ReadM SNP 0003.scaffold00019 152417 1 C A - ScafM INDEL 0003.scaffold00019 164663 1 T . scaffold12153 ScafM INDEL 0003.scaffold00019 164679 1 C . scaffold12153 ScafM SNP 0003.scaffold00019 166074 1 C A scaffold12153 ScafM SNP 0003.scaffold00019 166381 1 C A scaffold12153 ReadM SNP 0003.scaffold00019 183424 1 C T - ReadM SNP 0003.scaffold00019 189690 1 T A - ReadM SNP 0003.scaffold00019 196121 1 T G - ReadM INDEL 0003.scaffold00019 204422 1 . T - ReadM SNP 0003.scaffold00019 208371 1 C T - ReadM SNP 0003.scaffold00019 213670 1 T A - ScafM INDEL 0003.scaffold00019 219449 1 A . scaffold5196 ReadM SNP 0003.scaffold00019 224499 1 T C - ScafM INDEL 0003.scaffold00019 226388 10 .......... GGGGGGGGGG scaffold5196 ScafM INDEL 0003.scaffold00019 227194 5 GGGAA ..... scaffold5196 ReadM SNP 0003.scaffold00019 234829 1 C T - ReadM SNP 0003.scaffold00019 235184 1 T C - ScafM SNP 0003.scaffold00019 238681 1 A T scaffold5196 ScafM INDEL 0003.scaffold00019 239406 30 TACAGGGTGGTCTCAATGGGACTAAGCGGC .............................. scaffold15994 Both SNP 0003.scaffold00019 253659 1 G C scaffold15994 ReadM SNP 0003.scaffold00019 272630 1 G A - Both SNP 0003.scaffold00019 283486 1 G A scaffold37226 ScafM INDEL 0003.scaffold00019 285889 1 . T scaffold37226 ReadM SNP 0003.scaffold00019 289188 1 G T - ReadM SNP 0003.scaffold00019 293400 1 T C - ReadM SNP 0003.scaffold00019 304111 1 C G - ReadM SNP 0003.scaffold00019 304499 1 C T - ReadM INDEL 0003.scaffold00019 317615 1 A . - ReadM SNP 0003.scaffold00019 319847 1 G A - ScafM SNP 0004.scaffold00019 1086 1 C T scaffold16371 ScafM SNP 0004.scaffold00019 1129 1 G A scaffold16371 ScafM SNP 0004.scaffold00019 1238 1 C T scaffold16371 ScafM SNP 0004.scaffold00019 4420 1 A C scaffold6428 ScafM SNP 0004.scaffold00019 4432 2 CA GG scaffold6428 ScafM SNP 0004.scaffold00019 4445 1 C A scaffold6428 ScafM SNP 0004.scaffold00019 4455 1 A G scaffold6428 ScafM SNP 0004.scaffold00019 4522 2 GC AA scaffold6428 ScafM SNP 0004.scaffold00019 4538 1 C T scaffold6428 ScafM SNP 0004.scaffold00019 4666 1 T C scaffold6428 ScafM SNP 0004.scaffold00019 4712 1 A G scaffold6428 ScafM SNP 0004.scaffold00019 4737 1 T G scaffold6428 ScafM SNP 0004.scaffold00019 4776 1 T A scaffold6428 Both SNP 0004.scaffold00019 6233 1 C G scaffold16371 ScafM SNP 0004.scaffold00019 7342 1 T A scaffold16371 ReadM SNP 0004.scaffold00019 9218 1 A G - Both SNP 0004.scaffold00019 15918 1 G A scaffold16371 ReadM SNP 0004.scaffold00019 17605 1 T C - ReadM SNP 0004.scaffold00019 17612 1 T A - ScafM SNP 0004.scaffold00019 21704 2 GA AG scaffold16371 ScafM SNP 0004.scaffold00019 24736 1 A G scaffold36356 ScafM SNP 0004.scaffold00019 25490 1 A C scaffold1071 ScafM SNP 0004.scaffold00019 25536 1 G A scaffold1071 ScafM SNP 0004.scaffold00019 28821 1 G T scaffold32225 ScafM SNP 0004.scaffold00019 28845 1 T C scaffold32225 ScafM SNP 0004.scaffold00019 28883 1 G A scaffold32225 ReadM INDEL 0004.scaffold00019 31880 1 T . - ReadM SNP 0004.scaffold00019 31929 1 T A - ScafM SNP 0004.scaffold00019 35806 1 G A scaffold11732 ReadM SNP 0004.scaffold00019 55205 1 A C - ReadM SNP 0004.scaffold00019 89226 1 A G - ScafM SNP 0004.scaffold00019 95219 1 C A scaffold12806 ReadM SNP 0004.scaffold00019 100683 1 C T - ScafM SNP 0004.scaffold00019 105907 1 T G scaffold15796 ScafM SNP 0004.scaffold00019 105933 1 T G scaffold15796 ScafM SNP 0004.scaffold00019 105965 1 G T scaffold15796 ScafM SNP 0004.scaffold00019 105969 1 T C scaffold15796 ScafM SNP 0004.scaffold00019 105982 1 G T scaffold15796 ScafM SNP 0004.scaffold00019 106004 1 A G scaffold15796 ReadM SNP 0004.scaffold00019 126893 1 T C - ReadM SNP 0004.scaffold00019 134392 1 G T - Both SNP 0004.scaffold00019 139922 1 G A scaffold3301 Both SNP 0004.scaffold00019 139958 1 C G scaffold3301 Both SNP 0004.scaffold00019 156064 1 A G scaffold3301 ScafM SNP 0004.scaffold00019 158430 1 A T scaffold3301 ScafM INDEL 0004.scaffold00019 160428 8 ........ AGTATCTG scaffold3301 ReadM SNP 0004.scaffold00019 167188 1 C A - ReadM SNP 0004.scaffold00019 171536 1 A G - Both SNP 0004.scaffold00019 173111 1 G C scaffold3301 ReadM SNP 0004.scaffold00019 188426 1 T C - ReadM SNP 0004.scaffold00019 189286 1 C T - ScafM INDEL 0004.scaffold00019 195692 3 TCT .GA scaffold3301 ScafM INDEL 0004.scaffold00019 195696 1 C . scaffold3301 ScafM INDEL 0004.scaffold00019 195699 1 C . scaffold3301 ScafM SNP 0004.scaffold00019 195703 2 CT GG scaffold3301 ScafM SNP 0004.scaffold00019 195706 7 AAGCCAA GTTTTGG scaffold3301 ScafM INDEL 0004.scaffold00019 197154 1 . T scaffold3301 ScafM INDEL 0004.scaffold00019 199680 18 .................. CCACTGTCCATTAATTAT scaffold3301 Both SNP 0004.scaffold00019 207881 1 C A scaffold3301 ReadM SNP 0004.scaffold00019 232232 1 A C - ReadM SNP 0004.scaffold00019 232711 1 A T - ReadM SNP 0004.scaffold00019 234097 1 A T - ReadM INDEL 0004.scaffold00019 236802 1 A . - ReadM INDEL 0004.scaffold00019 236804 1 C . - ReadM INDEL 0004.scaffold00019 236805 1 A . - ScafM SNP 0004.scaffold00019 240406 1 G A scaffold39015 ScafM SNP 0004.scaffold00019 240420 1 A C scaffold39015 ScafM SNP 0004.scaffold00019 240452 1 A C scaffold39015 ScafM SNP 0004.scaffold00019 240480 1 A G scaffold39015 ScafM SNP 0004.scaffold00019 240571 1 T C scaffold39015 ScafM INDEL 0004.scaffold00019 240596 9 TATGCTTAT ......... scaffold39015 ScafM SNP 0004.scaffold00019 240689 1 G C scaffold39015 ScafM SNP 0004.scaffold00019 240691 1 T C scaffold39015 ScafM SNP 0004.scaffold00019 240697 1 C G scaffold39015 ScafM SNP 0004.scaffold00019 240735 1 A C scaffold39015 ScafM INDEL 0004.scaffold00019 240760 1 . A scaffold39015 ReadM SNP 0004.scaffold00019 241757 1 A T - ReadM SNP 0004.scaffold00019 245307 1 A T - ReadM SNP 0004.scaffold00019 247186 1 T A - ReadM INDEL 0004.scaffold00019 251987 1 . A - ScafM SNP 0004.scaffold00019 257129 1 T C scaffold2399 ScafM INDEL 0004.scaffold00019 259764 1 . A scaffold2399 ScafM INDEL 0004.scaffold00019 277649 24 ........................ TAAATTACTATATTATATAATTAA scaffold2399 ReadM SNP 0004.scaffold00019 288655 1 A C - ScafM INDEL 0004.scaffold00019 306090 1 . A scaffold2399 ScafM INDEL 0004.scaffold00019 318371 1 . T scaffold2399 ScafM SNP 0004.scaffold00019 322726 1 G A scaffold2399 ReadM INDEL 0004.scaffold00019 324079 1 . A - ScafM INDEL 0004.scaffold00019 326639 1 T . scaffold2399 Both SNP 0004.scaffold00019 341699 1 G T scaffold2399 Both SNP 0004.scaffold00019 341718 1 G C scaffold2399 ScafM SNP 0004.scaffold00019 344463 1 C A scaffold2399 ReadM SNP 0004.scaffold00019 374527 1 G C - ReadM INDEL 0004.scaffold00019 387877 2 CT .. - Both INDEL 0004.scaffold00019 390315 1 . C scaffold7816 ScafM INDEL 0004.scaffold00019 390334 1 C . scaffold7816 ScafM INDEL 0004.scaffold00019 390343 1 A . scaffold7816 ScafM INDEL 0004.scaffold00019 390358 1 A . scaffold7816 ScafM INDEL 0004.scaffold00019 390363 1 C . scaffold7816 ScafM INDEL 0004.scaffold00019 390373 2 AC .. scaffold7816 ScafM INDEL 0004.scaffold00019 390393 2 AC .. scaffold7816 ScafM SNP 0004.scaffold00019 394276 1 A T scaffold6160 ScafM INDEL 0004.scaffold00019 394423 1 T . scaffold6160 ScafM SNP 0004.scaffold00019 394426 1 A T scaffold6160 ReadM SNP 0004.scaffold00019 403601 1 C G - Both SNP 0004.scaffold00019 410716 1 A G scaffold7816 ReadM SNP 0004.scaffold00019 425307 1 G C - ReadM SNP 0004.scaffold00019 465441 1 A G - ScafM SNP 0004.scaffold00019 476125 1 C T scaffold5465 ScafM SNP 0004.scaffold00019 476128 2 CA TT scaffold5465 ScafM SNP 0004.scaffold00019 476134 1 T C scaffold5465 ScafM SNP 0004.scaffold00019 484277 1 T C scaffold10037 ScafM INDEL 0004.scaffold00019 484324 3 ... TAA scaffold10037 ScafM SNP 0004.scaffold00019 484335 1 G A scaffold10037 ScafM SNP 0004.scaffold00019 484372 1 T A scaffold10037 ScafM SNP 0004.scaffold00019 484405 1 T C scaffold10037 ScafM SNP 0004.scaffold00019 484447 2 GT AC scaffold10037 ScafM SNP 0004.scaffold00019 484523 1 G A scaffold10037 ScafM SNP 0004.scaffold00019 484528 1 T A scaffold10037 ScafM SNP 0004.scaffold00019 484539 1 C A scaffold10037 ScafM INDEL 0004.scaffold00019 518417 1 . A scaffold3589 ScafM INDEL 0004.scaffold00019 520916 1 . G scaffold3589 ScafM INDEL 0004.scaffold00019 523232 19 ................... CCCTCTCTCCCCCCCCCCC scaffold3589 ReadM SNP 0004.scaffold00019 535802 1 A T - ReadM SNP 0004.scaffold00019 540062 1 T G - ReadM SNP 0004.scaffold00019 540186 1 C G - ReadM SNP 0004.scaffold00019 540203 1 C T - ScafM SNP 0004.scaffold00019 540327 1 C G scaffold3589 ScafM INDEL 0004.scaffold00019 540332 8 ........ AACCGATC scaffold3589 ScafM SNP 0004.scaffold00019 540383 2 CT AC scaffold3589 ScafM SNP 0004.scaffold00019 540396 1 G C scaffold3589 ScafM SNP 0004.scaffold00019 540432 1 G A scaffold3589 ScafM SNP 0004.scaffold00019 540489 1 A T scaffold3589 ScafM SNP 0004.scaffold00019 540511 1 G A scaffold3589 ScafM SNP 0004.scaffold00019 540521 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 540562 1 C A scaffold3589 ScafM SNP 0004.scaffold00019 540569 1 C T scaffold3589 ScafM INDEL 0004.scaffold00019 540574 2 .. CA scaffold3589 ScafM SNP 0004.scaffold00019 540582 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 540600 1 T C scaffold3589 ScafM SNP 0004.scaffold00019 540682 2 TT CA scaffold3589 ScafM SNP 0004.scaffold00019 540867 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 540876 1 A T scaffold3589 ScafM SNP 0004.scaffold00019 540929 1 C T scaffold3589 ScafM SNP 0004.scaffold00019 540945 1 G A scaffold3589 ScafM SNP 0004.scaffold00019 540955 1 G C scaffold3589 ScafM SNP 0004.scaffold00019 540973 1 G A scaffold3589 ScafM SNP 0004.scaffold00019 540984 1 C G scaffold3589 ScafM INDEL 0004.scaffold00019 541019 2 .G AA scaffold3589 ScafM SNP 0004.scaffold00019 541053 1 T C scaffold3589 ScafM SNP 0004.scaffold00019 541080 1 A G scaffold3589 ScafM SNP 0004.scaffold00019 541108 1 A C scaffold3589 ScafM SNP 0004.scaffold00019 541117 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 541136 1 C T scaffold3589 ScafM SNP 0004.scaffold00019 541397 1 A G scaffold3589 ScafM SNP 0004.scaffold00019 541579 1 A G scaffold3589 ScafM SNP 0004.scaffold00019 541589 1 A G scaffold3589 ScafM SNP 0004.scaffold00019 541639 1 C T scaffold3589 ScafM SNP 0004.scaffold00019 541680 1 G C scaffold3589 ScafM SNP 0004.scaffold00019 541952 1 C T scaffold3589 Both SNP 0004.scaffold00019 542001 1 A G scaffold3589 ScafM SNP 0004.scaffold00019 542284 1 C T scaffold3589 ScafM INDEL 0004.scaffold00019 542295 2 .. AA scaffold3589 ScafM SNP 0004.scaffold00019 542510 1 A T scaffold3589 Both SNP 0004.scaffold00019 542631 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 542857 1 T C scaffold3589 ScafM SNP 0004.scaffold00019 542901 1 C T scaffold3589 ScafM SNP 0004.scaffold00019 543097 1 G A scaffold3589 ScafM SNP 0004.scaffold00019 543111 1 G A scaffold3589 ScafM INDEL 0004.scaffold00019 543123 3 ... TTA scaffold3589 ScafM SNP 0004.scaffold00019 543184 1 C A scaffold3589 ScafM SNP 0004.scaffold00019 543222 1 T A scaffold3589 ScafM SNP 0004.scaffold00019 543308 1 A C scaffold3589 ReadM SNP 0004.scaffold00019 543529 1 A C - ReadM SNP 0004.scaffold00019 543558 1 T A - ReadM SNP 0004.scaffold00019 543583 1 T C - ReadM SNP 0004.scaffold00019 543643 1 A C - ReadM SNP 0004.scaffold00019 543670 1 G A - ReadM SNP 0004.scaffold00019 543685 1 G T - ReadM SNP 0004.scaffold00019 543771 1 A G - ReadM SNP 0004.scaffold00019 543775 1 A T - ReadM SNP 0004.scaffold00019 543851 1 A G - ReadM SNP 0004.scaffold00019 543902 1 A G - ReadM SNP 0004.scaffold00019 543955 1 G C - ReadM SNP 0004.scaffold00019 543967 1 C G - ReadM SNP 0004.scaffold00019 544255 1 T C - ReadM SNP 0004.scaffold00019 544300 1 G A - ReadM SNP 0004.scaffold00019 544309 1 A G - ReadM SNP 0004.scaffold00019 544403 1 C T - ReadM SNP 0004.scaffold00019 544448 1 G C - ReadM SNP 0004.scaffold00019 544540 1 T G - ScafM SNP 0004.scaffold00019 544917 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 544953 1 A G scaffold19795 ScafM INDEL 0004.scaffold00019 544994 2 .A TT scaffold19795 Both SNP 0004.scaffold00019 545231 1 A G scaffold19795 ReadM INDEL 0004.scaffold00019 545302 1 . T - ScafM INDEL 0004.scaffold00019 545302 2 .A TT scaffold19795 Both SNP 0004.scaffold00019 545323 1 A C scaffold19795 ScafM SNP 0004.scaffold00019 545427 1 G T scaffold19795 ScafM SNP 0004.scaffold00019 545537 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 545569 2 CC GT scaffold19795 Both SNP 0004.scaffold00019 545673 1 G A scaffold19795 Both INDEL 0004.scaffold00019 545716 1 . A scaffold19795 Both SNP 0004.scaffold00019 545772 1 G C scaffold19795 Both SNP 0004.scaffold00019 545820 1 C G scaffold19795 Both SNP 0004.scaffold00019 545831 1 G A scaffold19795 Both SNP 0004.scaffold00019 546051 1 G T scaffold19795 Both SNP 0004.scaffold00019 546067 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 546103 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 546164 1 T C scaffold19795 Both SNP 0004.scaffold00019 546222 1 T A scaffold19795 Both SNP 0004.scaffold00019 546327 1 G A scaffold19795 ScafM SNP 0004.scaffold00019 546480 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 546511 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 546513 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 546535 1 C A scaffold19795 ScafM SNP 0004.scaffold00019 546548 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 546586 1 G A scaffold19795 ScafM SNP 0004.scaffold00019 546748 1 A T scaffold19795 ScafM INDEL 0004.scaffold00019 546892 3 ... ATT scaffold19795 ScafM SNP 0004.scaffold00019 546922 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 546940 1 C A scaffold19795 Both SNP 0004.scaffold00019 547187 1 A C scaffold19795 Both SNP 0004.scaffold00019 547320 1 C A scaffold19795 Both SNP 0004.scaffold00019 547421 1 G T scaffold19795 Both SNP 0004.scaffold00019 547454 1 T G scaffold19795 Both SNP 0004.scaffold00019 547498 1 A G scaffold19795 Both SNP 0004.scaffold00019 547562 1 G C scaffold19795 Both SNP 0004.scaffold00019 547652 1 G A scaffold19795 Both SNP 0004.scaffold00019 547712 1 G T scaffold19795 Both SNP 0004.scaffold00019 547754 1 A T scaffold19795 ScafM SNP 0004.scaffold00019 547796 1 T C scaffold19795 Both SNP 0004.scaffold00019 547903 1 C T scaffold19795 Both SNP 0004.scaffold00019 547909 1 G A scaffold19795 Both SNP 0004.scaffold00019 547913 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 547976 1 A G scaffold19795 Both SNP 0004.scaffold00019 548042 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 548128 1 G A scaffold19795 Both SNP 0004.scaffold00019 548173 1 A T scaffold19795 ScafM SNP 0004.scaffold00019 548330 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 548335 1 G A scaffold19795 ScafM SNP 0004.scaffold00019 548344 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 548346 1 A T scaffold19795 Both SNP 0004.scaffold00019 548434 1 C T scaffold19795 Both SNP 0004.scaffold00019 548565 1 G T scaffold19795 Both SNP 0004.scaffold00019 548612 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 548624 2 TT AA scaffold19795 Both SNP 0004.scaffold00019 548681 1 A C scaffold19795 ReadM SNP 0004.scaffold00019 548961 1 T C - ScafM SNP 0004.scaffold00019 549616 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 549636 1 G C scaffold19795 ScafM INDEL 0004.scaffold00019 549698 1 . T scaffold19795 Both SNP 0004.scaffold00019 549711 1 T C scaffold19795 ScafM INDEL 0004.scaffold00019 549854 1 . C scaffold19795 ScafM INDEL 0004.scaffold00019 549855 1 . C scaffold19795 ScafM SNP 0004.scaffold00019 549890 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 549907 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 549921 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 549924 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 549943 1 G A scaffold19795 ScafM SNP 0004.scaffold00019 550065 2 AC CT scaffold19795 ScafM INDEL 0004.scaffold00019 550176 1 . A scaffold19795 ScafM SNP 0004.scaffold00019 550203 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 550208 1 G A scaffold19795 ScafM INDEL 0004.scaffold00019 550215 1 . A scaffold19795 ScafM INDEL 0004.scaffold00019 550221 1 . T scaffold19795 ScafM SNP 0004.scaffold00019 550237 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 550265 1 A G scaffold19795 ScafM INDEL 0004.scaffold00019 550503 10 .......... TCGATAAATA scaffold19795 ScafM SNP 0004.scaffold00019 550585 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 550664 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 550730 1 G T scaffold19795 ScafM SNP 0004.scaffold00019 550754 1 G C scaffold19795 ScafM SNP 0004.scaffold00019 550798 1 A G scaffold19795 Both SNP 0004.scaffold00019 550960 1 C A scaffold19795 ScafM INDEL 0004.scaffold00019 551068 10 .......... ATTATGCGAA scaffold19795 Both SNP 0004.scaffold00019 551295 1 T G scaffold19795 Both SNP 0004.scaffold00019 551319 1 G A scaffold19795 Both SNP 0004.scaffold00019 551524 1 A G scaffold19795 Both SNP 0004.scaffold00019 551591 1 G A scaffold19795 ReadM SNP 0004.scaffold00019 551790 1 T C - ScafM INDEL 0004.scaffold00019 551898 1 G . scaffold19795 ScafM SNP 0004.scaffold00019 551928 1 A T scaffold19795 ScafM SNP 0004.scaffold00019 551973 1 G A scaffold19795 ReadM SNP 0004.scaffold00019 552001 1 C A - ReadM SNP 0004.scaffold00019 552061 1 C T - ReadM SNP 0004.scaffold00019 552090 1 G T - Both SNP 0004.scaffold00019 552203 1 C A scaffold19795 ScafM SNP 0004.scaffold00019 552268 1 A C scaffold19795 ScafM INDEL 0004.scaffold00019 552310 2 TA .. scaffold19795 ScafM INDEL 0004.scaffold00019 552352 2 .. AA scaffold19795 ScafM SNP 0004.scaffold00019 552373 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 552387 1 C A scaffold19795 ReadM SNP 0004.scaffold00019 552726 1 A T - ReadM SNP 0004.scaffold00019 552913 1 G C - ReadM SNP 0004.scaffold00019 552964 1 G A - ReadM INDEL 0004.scaffold00019 553059 1 . T - ReadM SNP 0004.scaffold00019 553162 1 T A - ReadM SNP 0004.scaffold00019 553210 1 G A - ReadM SNP 0004.scaffold00019 553225 1 A T - ReadM INDEL 0004.scaffold00019 553294 1 . A - ReadM SNP 0004.scaffold00019 553320 1 T C - ScafM SNP 0004.scaffold00019 553560 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 553568 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 553574 1 G A scaffold19795 Both SNP 0004.scaffold00019 553625 1 T C scaffold19795 Both SNP 0004.scaffold00019 553709 1 G T scaffold19795 Both SNP 0004.scaffold00019 553711 1 G A scaffold19795 Both SNP 0004.scaffold00019 553772 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 553839 1 C A scaffold19795 ScafM SNP 0004.scaffold00019 553843 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 553861 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 553868 1 A T scaffold19795 Both SNP 0004.scaffold00019 554002 1 C G scaffold19795 ReadM SNP 0004.scaffold00019 554232 1 A T - ReadM SNP 0004.scaffold00019 554285 1 A C - ReadM SNP 0004.scaffold00019 554310 1 G A - ReadM SNP 0004.scaffold00019 554400 1 G C - ReadM SNP 0004.scaffold00019 554413 1 C G - ReadM SNP 0004.scaffold00019 554493 1 T G - ReadM SNP 0004.scaffold00019 554545 1 G A - ReadM SNP 0004.scaffold00019 554646 1 A T - ReadM SNP 0004.scaffold00019 554728 1 T C - ReadM SNP 0004.scaffold00019 554810 1 T G - ReadM SNP 0004.scaffold00019 555090 1 C A - ReadM INDEL 0004.scaffold00019 555123 1 A . - ReadM SNP 0004.scaffold00019 555134 1 A G - ReadM SNP 0004.scaffold00019 555148 1 T G - ReadM SNP 0004.scaffold00019 555294 1 G A - ReadM INDEL 0004.scaffold00019 555408 1 . A - ReadM SNP 0004.scaffold00019 555449 1 C T - ReadM SNP 0004.scaffold00019 555549 1 A C - ReadM SNP 0004.scaffold00019 555638 1 G A - ReadM SNP 0004.scaffold00019 555687 1 A G - ReadM SNP 0004.scaffold00019 555711 1 T C - ReadM SNP 0004.scaffold00019 555824 1 T C - ReadM SNP 0004.scaffold00019 555917 1 C T - ReadM SNP 0004.scaffold00019 555974 1 T A - ReadM SNP 0004.scaffold00019 556033 1 G A - ReadM SNP 0004.scaffold00019 556058 1 G T - ReadM SNP 0004.scaffold00019 556081 1 C T - ReadM INDEL 0004.scaffold00019 556379 2 .. GC - ReadM SNP 0004.scaffold00019 556392 1 C T - ReadM SNP 0004.scaffold00019 556445 1 G A - ReadM SNP 0004.scaffold00019 556470 1 G T - ScafM SNP 0004.scaffold00019 556813 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 556900 1 A C scaffold19795 ScafM SNP 0004.scaffold00019 556953 1 G A scaffold19795 ScafM SNP 0004.scaffold00019 556978 1 C G scaffold19795 ScafM SNP 0004.scaffold00019 556987 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 556990 1 G A scaffold19795 Both SNP 0004.scaffold00019 557107 1 A G scaffold19795 Both SNP 0004.scaffold00019 557222 1 G A scaffold19795 Both SNP 0004.scaffold00019 557409 1 A C scaffold19795 Both SNP 0004.scaffold00019 557452 1 T G scaffold19795 Both SNP 0004.scaffold00019 557511 1 A C scaffold19795 Both SNP 0004.scaffold00019 557576 1 C T scaffold19795 Both SNP 0004.scaffold00019 557668 1 A G scaffold19795 Both SNP 0004.scaffold00019 557677 1 C T scaffold19795 Both INDEL 0004.scaffold00019 557709 2 .. AT scaffold19795 Both SNP 0004.scaffold00019 557759 1 C T scaffold19795 Both SNP 0004.scaffold00019 557798 1 A C scaffold19795 Both SNP 0004.scaffold00019 557803 1 C T scaffold19795 ScafM INDEL 0004.scaffold00019 557822 10 TGTTGGCTTG .......... scaffold19795 ScafM INDEL 0004.scaffold00019 557833 1 T . scaffold19795 ScafM INDEL 0004.scaffold00019 557836 2 GC .. scaffold19795 ScafM SNP 0004.scaffold00019 557839 1 A G scaffold19795 ScafM INDEL 0004.scaffold00019 557842 1 G . scaffold19795 ScafM INDEL 0004.scaffold00019 557844 1 A . scaffold19795 ScafM INDEL 0004.scaffold00019 557847 3 ATG ... scaffold19795 ScafM INDEL 0004.scaffold00019 557853 1 C . scaffold19795 ScafM SNP 0004.scaffold00019 557859 1 T C scaffold19795 Both SNP 0004.scaffold00019 557901 1 C G scaffold19795 Both SNP 0004.scaffold00019 557912 1 G A scaffold19795 Both SNP 0004.scaffold00019 558002 1 A C scaffold19795 Both SNP 0004.scaffold00019 558086 1 C G scaffold19795 Both SNP 0004.scaffold00019 558107 1 G T scaffold19795 Both SNP 0004.scaffold00019 558119 1 G C scaffold19795 Both SNP 0004.scaffold00019 558351 1 C T scaffold19795 Both SNP 0004.scaffold00019 558357 1 A G scaffold19795 Both SNP 0004.scaffold00019 558395 1 G C scaffold19795 Both SNP 0004.scaffold00019 558437 1 C T scaffold19795 Both SNP 0004.scaffold00019 558478 1 T A scaffold19795 Both INDEL 0004.scaffold00019 558514 1 G . scaffold19795 Both SNP 0004.scaffold00019 558529 1 A G scaffold19795 Both SNP 0004.scaffold00019 558584 1 A G scaffold19795 Both SNP 0004.scaffold00019 558619 1 C T scaffold19795 ReadM SNP 0004.scaffold00019 558717 1 T A - Both SNP 0004.scaffold00019 558799 1 G T scaffold19795 Both SNP 0004.scaffold00019 558896 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 559000 1 G A scaffold19795 ReadM SNP 0004.scaffold00019 559122 1 C T - ReadM SNP 0004.scaffold00019 559138 1 A G - ReadM SNP 0004.scaffold00019 559179 1 C A - ReadM SNP 0004.scaffold00019 559322 1 A C - ReadM SNP 0004.scaffold00019 559373 1 T C - ScafM SNP 0004.scaffold00019 559583 2 CG TA scaffold19795 ScafM INDEL 0004.scaffold00019 559587 1 . A scaffold19795 Both SNP 0004.scaffold00019 559718 1 A T scaffold19795 Both SNP 0004.scaffold00019 559750 1 A C scaffold19795 ScafM SNP 0004.scaffold00019 559832 1 G C scaffold19795 ScafM SNP 0004.scaffold00019 559834 1 C A scaffold19795 Both SNP 0004.scaffold00019 559955 1 A G scaffold19795 Both SNP 0004.scaffold00019 560018 1 A G scaffold19795 Both SNP 0004.scaffold00019 560069 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 560117 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 560130 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 560152 1 G T scaffold19795 ScafM SNP 0004.scaffold00019 560160 1 C T scaffold19795 ScafM SNP 0004.scaffold00019 560179 1 T C scaffold19795 Both SNP 0004.scaffold00019 560337 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 560457 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 560609 2 TC AG scaffold19795 ReadM SNP 0004.scaffold00019 560690 1 C T - ReadM SNP 0004.scaffold00019 560787 1 G A - ScafM SNP 0004.scaffold00019 560946 2 AC GA scaffold19795 Both SNP 0004.scaffold00019 561043 1 T C scaffold19795 ReadM SNP 0004.scaffold00019 561059 1 T C - ReadM SNP 0004.scaffold00019 561115 1 T G - ReadM SNP 0004.scaffold00019 561123 1 C T - ReadM SNP 0004.scaffold00019 561147 1 G A - ScafM INDEL 0004.scaffold00019 561209 3 ... ATT scaffold19795 ScafM SNP 0004.scaffold00019 561212 1 C A scaffold19795 ScafM INDEL 0004.scaffold00019 561213 2 .. AA scaffold19795 ScafM INDEL 0004.scaffold00019 561214 3 ... AGA scaffold19795 ScafM SNP 0004.scaffold00019 561216 1 C G scaffold19795 ScafM SNP 0004.scaffold00019 561219 2 CT TG scaffold19795 ScafM SNP 0004.scaffold00019 561224 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 561227 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 561230 1 C A scaffold19795 ScafM INDEL 0004.scaffold00019 561231 2 .. GA scaffold19795 ScafM INDEL 0004.scaffold00019 561232 1 . A scaffold19795 ScafM SNP 0004.scaffold00019 561235 1 C A scaffold19795 ScafM SNP 0004.scaffold00019 561237 3 TGA CCC scaffold19795 ScafM INDEL 0004.scaffold00019 561242 2 TT .A scaffold19795 ScafM INDEL 0004.scaffold00019 561250 3 ... ATG scaffold19795 ScafM INDEL 0004.scaffold00019 561252 5 ..... GCCCA scaffold19795 ScafM SNP 0004.scaffold00019 561258 1 A C scaffold19795 ScafM SNP 0004.scaffold00019 561994 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 562027 1 T G scaffold19795 ScafM INDEL 0004.scaffold00019 562034 2 AT .. scaffold19795 ReadM SNP 0004.scaffold00019 562159 1 T C - ReadM SNP 0004.scaffold00019 562304 1 A T - ReadM SNP 0004.scaffold00019 562464 1 C T - ReadM SNP 0004.scaffold00019 562518 1 G T - ReadM SNP 0004.scaffold00019 562589 1 A C - ReadM SNP 0004.scaffold00019 562751 1 G A - ReadM SNP 0004.scaffold00019 562821 1 A T - ReadM SNP 0004.scaffold00019 562837 1 G A - ReadM SNP 0004.scaffold00019 562937 1 T A - ReadM SNP 0004.scaffold00019 562967 1 C T - ReadM SNP 0004.scaffold00019 563112 1 C T - ReadM SNP 0004.scaffold00019 563249 1 G A - ReadM SNP 0004.scaffold00019 563407 1 A G - ReadM SNP 0004.scaffold00019 563436 1 C T - ScafM INDEL 0004.scaffold00019 563497 9 TAGTGGAAA ......... scaffold19795 Both SNP 0004.scaffold00019 563543 1 C A scaffold19795 Both SNP 0004.scaffold00019 563569 1 C T scaffold19795 Both SNP 0004.scaffold00019 563571 1 A G scaffold19795 Both SNP 0004.scaffold00019 563688 1 T G scaffold19795 Both SNP 0004.scaffold00019 563705 1 T G scaffold19795 Both SNP 0004.scaffold00019 563869 1 T C scaffold19795 Both SNP 0004.scaffold00019 563903 1 T C scaffold19795 Both SNP 0004.scaffold00019 563944 1 C T scaffold19795 ReadM SNP 0004.scaffold00019 564017 1 T C - ReadM SNP 0004.scaffold00019 564176 1 G A - ReadM SNP 0004.scaffold00019 564214 1 G A - ReadM SNP 0004.scaffold00019 564225 1 T A - ReadM SNP 0004.scaffold00019 564289 1 G T - ReadM SNP 0004.scaffold00019 564305 1 G A - ReadM SNP 0004.scaffold00019 564419 1 C G - ReadM SNP 0004.scaffold00019 564433 1 G A - ReadM SNP 0004.scaffold00019 564574 1 C T - ReadM SNP 0004.scaffold00019 564579 1 T C - ReadM SNP 0004.scaffold00019 564675 1 T C - ReadM SNP 0004.scaffold00019 564686 1 C G - ReadM SNP 0004.scaffold00019 564764 1 T A - ReadM SNP 0004.scaffold00019 564813 1 C A - ReadM SNP 0004.scaffold00019 564932 1 A G - ReadM SNP 0004.scaffold00019 564939 1 T C - ReadM SNP 0004.scaffold00019 564984 1 G T - ReadM SNP 0004.scaffold00019 565022 1 A C - Both SNP 0004.scaffold00019 565086 1 A G scaffold19795 Both SNP 0004.scaffold00019 565183 1 G A scaffold19795 Both SNP 0004.scaffold00019 565240 1 C G scaffold19795 Both SNP 0004.scaffold00019 565255 1 T G scaffold19795 Both SNP 0004.scaffold00019 565280 1 A T scaffold19795 ReadM SNP 0004.scaffold00019 565339 1 A G - ReadM SNP 0004.scaffold00019 565456 1 A C - ReadM SNP 0004.scaffold00019 565464 1 C T - ReadM SNP 0004.scaffold00019 565567 1 C A - ReadM SNP 0004.scaffold00019 565653 1 C A - ReadM SNP 0004.scaffold00019 565663 1 T C - ReadM INDEL 0004.scaffold00019 565715 1 . T - ReadM SNP 0004.scaffold00019 565746 1 C A - ReadM SNP 0004.scaffold00019 565809 1 G A - ReadM SNP 0004.scaffold00019 565822 1 G A - ReadM SNP 0004.scaffold00019 565854 1 G T - ReadM SNP 0004.scaffold00019 565924 1 G A - ReadM SNP 0004.scaffold00019 566013 1 T A - ReadM SNP 0004.scaffold00019 566092 1 T C - ReadM INDEL 0004.scaffold00019 566162 1 . A - ReadM SNP 0004.scaffold00019 566342 1 A G - ReadM SNP 0004.scaffold00019 566369 1 T C - ReadM SNP 0004.scaffold00019 566430 1 T G - ReadM SNP 0004.scaffold00019 566579 1 C T - ReadM SNP 0004.scaffold00019 566682 1 A G - ReadM SNP 0004.scaffold00019 566833 1 C A - ReadM INDEL 0004.scaffold00019 566894 3 ... ATT - ReadM SNP 0004.scaffold00019 566963 1 G A - ReadM SNP 0004.scaffold00019 567016 1 C T - ReadM SNP 0004.scaffold00019 567058 1 G A - ReadM SNP 0004.scaffold00019 567103 1 A T - ReadM SNP 0004.scaffold00019 567106 1 A G - ReadM SNP 0004.scaffold00019 567184 1 G C - ReadM SNP 0004.scaffold00019 567274 1 G T - ReadM SNP 0004.scaffold00019 567385 1 A C - ReadM SNP 0004.scaffold00019 567482 1 A G - ReadM SNP 0004.scaffold00019 567594 1 T C - ReadM SNP 0004.scaffold00019 567601 1 C T - ReadM SNP 0004.scaffold00019 567623 1 C T - ReadM SNP 0004.scaffold00019 567669 1 G A - ReadM SNP 0004.scaffold00019 567783 1 A G - ReadM SNP 0004.scaffold00019 567963 1 A G - ReadM SNP 0004.scaffold00019 568026 1 A G - ReadM SNP 0004.scaffold00019 568128 1 T C - ReadM SNP 0004.scaffold00019 568296 1 T C - ReadM SNP 0004.scaffold00019 568539 1 C G - ReadM SNP 0004.scaffold00019 568840 1 G A - ReadM SNP 0004.scaffold00019 568868 1 C G - ReadM SNP 0004.scaffold00019 568910 1 A G - ReadM SNP 0004.scaffold00019 569088 1 C A - ReadM SNP 0004.scaffold00019 569201 1 T C - ReadM SNP 0004.scaffold00019 569293 1 C G - ReadM SNP 0004.scaffold00019 569364 1 T C - ReadM SNP 0004.scaffold00019 569392 1 T A - ReadM SNP 0004.scaffold00019 569437 1 G C - ReadM SNP 0004.scaffold00019 569460 1 A G - ReadM SNP 0004.scaffold00019 569473 1 G A - ReadM SNP 0004.scaffold00019 569535 1 G C - ReadM SNP 0004.scaffold00019 569539 1 A G - ReadM SNP 0004.scaffold00019 569558 1 G A - ReadM SNP 0004.scaffold00019 569709 1 A C - ReadM SNP 0004.scaffold00019 569840 1 A C - ReadM SNP 0004.scaffold00019 569919 1 G A - ReadM SNP 0004.scaffold00019 569963 1 C T - ReadM SNP 0004.scaffold00019 570015 1 C T - ReadM SNP 0004.scaffold00019 570161 1 G T - ReadM SNP 0004.scaffold00019 570244 1 A T - ReadM SNP 0004.scaffold00019 570398 1 G T - ReadM SNP 0004.scaffold00019 570425 1 C T - ReadM SNP 0004.scaffold00019 570455 1 G A - ReadM INDEL 0004.scaffold00019 570494 1 A . - ReadM SNP 0004.scaffold00019 570548 1 A C - ReadM SNP 0004.scaffold00019 570581 1 C A - ReadM SNP 0004.scaffold00019 570744 1 T C - ReadM SNP 0004.scaffold00019 570770 1 T C - ReadM SNP 0004.scaffold00019 574438 1 G T - ReadM SNP 0004.scaffold00019 574605 1 T C - ReadM SNP 0004.scaffold00019 574659 1 A C - ReadM SNP 0004.scaffold00019 574665 1 A G - ReadM SNP 0004.scaffold00019 574781 1 A C - ReadM SNP 0004.scaffold00019 574808 1 T G - ReadM SNP 0004.scaffold00019 574820 1 A G - ReadM SNP 0004.scaffold00019 575014 1 C T - ReadM SNP 0004.scaffold00019 575090 1 G C - ReadM SNP 0004.scaffold00019 575208 1 T A - ReadM SNP 0004.scaffold00019 575315 1 G C - ReadM SNP 0004.scaffold00019 575443 1 C A - ReadM SNP 0004.scaffold00019 575490 1 A T - ReadM SNP 0004.scaffold00019 575511 1 G A - ReadM SNP 0004.scaffold00019 575648 1 T G - ReadM SNP 0004.scaffold00019 575686 1 T A - ReadM SNP 0004.scaffold00019 575706 1 T C - Both SNP 0004.scaffold00019 575818 1 C G scaffold19795 Both SNP 0004.scaffold00019 575976 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 576093 1 C G scaffold19795 ScafM SNP 0004.scaffold00019 576215 1 A G scaffold19795 ScafM SNP 0004.scaffold00019 576243 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 576622 1 C T scaffold19795 Both INDEL 0004.scaffold00019 576946 1 . A scaffold19795 ScafM SNP 0004.scaffold00019 576948 1 C A scaffold19795 ScafM SNP 0004.scaffold00019 577012 1 G A scaffold19795 ScafM INDEL 0004.scaffold00019 577025 1 A . scaffold19795 Both SNP 0004.scaffold00019 577292 1 C T scaffold19795 Both SNP 0004.scaffold00019 577489 1 T C scaffold19795 Both SNP 0004.scaffold00019 577571 1 C A scaffold19795 ScafM INDEL 0004.scaffold00019 577853 4 ATAT .... scaffold19795 Both SNP 0004.scaffold00019 577876 1 G A scaffold19795 Both SNP 0004.scaffold00019 577956 1 T G scaffold19795 ReadM SNP 0004.scaffold00019 578054 1 C T - ReadM SNP 0004.scaffold00019 578287 1 T C - ReadM SNP 0004.scaffold00019 578359 1 C T - ReadM SNP 0004.scaffold00019 578504 1 G A - ReadM SNP 0004.scaffold00019 578523 1 A G - ReadM SNP 0004.scaffold00019 578537 1 A G - Both SNP 0004.scaffold00019 578706 1 A C scaffold19795 ReadM SNP 0004.scaffold00019 578758 1 A G - ReadM SNP 0004.scaffold00019 578778 1 C T - ReadM SNP 0004.scaffold00019 578815 1 G T - ReadM INDEL 0004.scaffold00019 578875 1 C . - ReadM SNP 0004.scaffold00019 578880 1 G C - ReadM SNP 0004.scaffold00019 578922 1 C G - ReadM SNP 0004.scaffold00019 578933 1 G A - ReadM SNP 0004.scaffold00019 578955 1 T C - ReadM SNP 0004.scaffold00019 579020 1 G A - ReadM SNP 0004.scaffold00019 579167 1 A C - ReadM SNP 0004.scaffold00019 579169 1 T C - ReadM SNP 0004.scaffold00019 579240 1 A G - ReadM SNP 0004.scaffold00019 579252 1 A C - ReadM SNP 0004.scaffold00019 579294 1 T G - ScafM SNP 0004.scaffold00019 579424 1 T C scaffold19795 ScafM SNP 0004.scaffold00019 579447 1 T A scaffold19795 ScafM SNP 0004.scaffold00019 579452 1 T G scaffold19795 ScafM SNP 0004.scaffold00019 579460 1 C T scaffold19795 Both SNP 0004.scaffold00019 579642 1 C T scaffold19795 Both SNP 0004.scaffold00019 579671 1 T C scaffold19795 Both SNP 0004.scaffold00019 579688 1 A C scaffold19795 Both SNP 0004.scaffold00019 579738 1 C G scaffold19795 ScafM INDEL 0004.scaffold00019 580744 1 A . scaffold1692 ScafM SNP 0004.scaffold00019 580759 1 C A scaffold1692 ScafM SNP 0004.scaffold00019 580793 1 C T scaffold1692 ScafM SNP 0004.scaffold00019 580803 1 A T scaffold1692 ScafM SNP 0004.scaffold00019 580827 1 G A scaffold1692 ScafM SNP 0004.scaffold00019 580830 1 T C scaffold1692 ScafM SNP 0004.scaffold00019 580849 1 C T scaffold1692 Both SNP 0004.scaffold00019 580901 1 C T scaffold1692 Both SNP 0004.scaffold00019 580913 1 C T scaffold1692 Both SNP 0004.scaffold00019 580962 1 A G scaffold1692 Both SNP 0004.scaffold00019 581007 1 A C scaffold1692 ReadM SNP 0004.scaffold00019 581051 1 T C - ReadM SNP 0004.scaffold00019 581054 1 T C - ScafM SNP 0004.scaffold00019 581333 1 T G scaffold1692 ReadM SNP 0004.scaffold00019 581513 1 T C - ReadM SNP 0004.scaffold00019 581516 1 T C - ReadM SNP 0004.scaffold00019 581556 1 C T - ReadM SNP 0004.scaffold00019 581619 1 T G - ReadM INDEL 0004.scaffold00019 581623 1 T . - Both SNP 0004.scaffold00019 581665 1 T A scaffold1692 Both SNP 0004.scaffold00019 581708 1 A T scaffold1692 ScafM SNP 0004.scaffold00019 581744 1 G A scaffold1692 ScafM SNP 0004.scaffold00019 581746 1 A G scaffold1692 ScafM SNP 0004.scaffold00019 581803 1 G A scaffold1692 ScafM SNP 0004.scaffold00019 581826 1 G T scaffold1692 ScafM SNP 0004.scaffold00019 581850 1 T C scaffold1692 ReadM SNP 0004.scaffold00019 581895 1 A C - ReadM SNP 0004.scaffold00019 581939 1 C T - ReadM SNP 0004.scaffold00019 582010 1 T A - Both SNP 0004.scaffold00019 582050 1 T C scaffold1692 ScafM SNP 0004.scaffold00019 582073 1 T G scaffold1692 ReadM SNP 0004.scaffold00019 582426 1 G A - ReadM SNP 0004.scaffold00019 582543 1 G T - ReadM SNP 0004.scaffold00019 582550 1 G A - ReadM SNP 0004.scaffold00019 582820 1 A G - ReadM SNP 0004.scaffold00019 582829 1 A G - ReadM SNP 0004.scaffold00019 582937 1 G A - ReadM SNP 0004.scaffold00019 583074 1 T C - ReadM SNP 0004.scaffold00019 583109 1 T C - ReadM SNP 0004.scaffold00019 583433 1 C T - ReadM SNP 0004.scaffold00019 583469 1 C G - ReadM SNP 0004.scaffold00019 583992 1 C A - ReadM SNP 0004.scaffold00019 584168 1 T A - ReadM SNP 0004.scaffold00019 584186 1 T A - ReadM SNP 0004.scaffold00019 584239 1 C T - ReadM SNP 0004.scaffold00019 584290 1 A G - ReadM SNP 0004.scaffold00019 584311 1 T A - ReadM SNP 0004.scaffold00019 584332 1 G A - ReadM SNP 0004.scaffold00019 584402 1 A C - ReadM SNP 0004.scaffold00019 584436 1 T C - ReadM SNP 0004.scaffold00019 584438 1 T A - ReadM SNP 0004.scaffold00019 584467 1 G T - ReadM SNP 0004.scaffold00019 584499 1 T C - ReadM SNP 0004.scaffold00019 584554 1 A G - ReadM INDEL 0004.scaffold00019 584599 1 A . - ReadM SNP 0004.scaffold00019 584823 1 A G - ReadM SNP 0004.scaffold00019 584847 1 T C - ReadM SNP 0004.scaffold00019 584854 1 T C - ReadM SNP 0004.scaffold00019 584939 1 T G - ReadM SNP 0004.scaffold00019 584948 1 T C - ReadM SNP 0004.scaffold00019 584998 1 C T - ReadM SNP 0004.scaffold00019 585369 1 C G - ReadM SNP 0004.scaffold00019 585390 1 T C - ReadM SNP 0004.scaffold00019 585471 1 G A - ReadM SNP 0004.scaffold00019 586232 1 G C - ReadM SNP 0004.scaffold00019 586242 1 A T - ReadM SNP 0004.scaffold00019 586262 1 G A - ReadM SNP 0004.scaffold00019 586406 1 G C - ReadM SNP 0004.scaffold00019 586458 1 T A - ReadM SNP 0004.scaffold00019 586479 1 G A - ReadM SNP 0004.scaffold00019 586589 1 A T - ReadM SNP 0004.scaffold00019 586670 1 A G - ReadM SNP 0004.scaffold00019 586746 1 A T - ReadM SNP 0004.scaffold00019 586837 1 G A - ReadM SNP 0004.scaffold00019 586890 1 A G - ReadM SNP 0004.scaffold00019 586915 1 G A - ReadM SNP 0004.scaffold00019 586919 1 T C - ReadM SNP 0004.scaffold00019 586959 1 G C - ReadM SNP 0004.scaffold00019 587164 1 A G - ReadM SNP 0004.scaffold00019 587313 1 C T - ReadM SNP 0004.scaffold00019 587384 1 T G - ReadM SNP 0004.scaffold00019 587411 1 G T - ReadM SNP 0004.scaffold00019 587499 1 C T - ReadM SNP 0004.scaffold00019 587509 1 C T - ReadM SNP 0004.scaffold00019 587555 1 T C - ReadM SNP 0004.scaffold00019 587570 1 G A - ReadM SNP 0004.scaffold00019 587700 1 T A - ReadM SNP 0004.scaffold00019 587705 1 G A - ReadM SNP 0004.scaffold00019 587732 1 A T - ReadM SNP 0004.scaffold00019 587785 1 A C - ReadM SNP 0004.scaffold00019 587806 1 C A - ReadM SNP 0004.scaffold00019 587812 1 G A - ReadM SNP 0004.scaffold00019 587874 1 T C - ReadM SNP 0004.scaffold00019 588021 1 C T - ReadM SNP 0004.scaffold00019 588072 1 G T - ReadM SNP 0004.scaffold00019 588094 1 G A - ReadM SNP 0004.scaffold00019 588163 1 G A - ReadM SNP 0004.scaffold00019 588204 1 G A - ReadM SNP 0004.scaffold00019 588355 1 T G - ReadM SNP 0004.scaffold00019 588376 1 T C - ReadM SNP 0004.scaffold00019 588451 1 A G - ReadM SNP 0004.scaffold00019 588487 1 G A - ReadM SNP 0004.scaffold00019 588564 1 C T - ReadM SNP 0004.scaffold00019 588588 1 T C - ReadM SNP 0004.scaffold00019 588641 1 C A - ReadM SNP 0004.scaffold00019 588693 1 A T - ReadM SNP 0004.scaffold00019 588727 1 G A - ReadM SNP 0004.scaffold00019 588770 1 T G - ReadM SNP 0004.scaffold00019 588836 1 C T - ReadM SNP 0004.scaffold00019 588844 1 A G - ReadM SNP 0004.scaffold00019 588992 1 A T - ReadM SNP 0004.scaffold00019 589088 1 A T - ReadM SNP 0004.scaffold00019 589105 1 C G - ReadM SNP 0004.scaffold00019 589113 1 A G - ReadM SNP 0004.scaffold00019 589132 1 A G - ReadM SNP 0004.scaffold00019 589191 1 G A - ReadM SNP 0004.scaffold00019 589237 1 T A - ReadM SNP 0004.scaffold00019 589265 1 T C - ReadM SNP 0004.scaffold00019 589284 1 T G - ReadM SNP 0004.scaffold00019 589307 1 T C - ReadM SNP 0004.scaffold00019 589427 1 T A - ReadM SNP 0004.scaffold00019 589536 1 C T - ReadM SNP 0004.scaffold00019 589661 1 G C - ReadM SNP 0004.scaffold00019 589733 1 G C - ReadM SNP 0004.scaffold00019 589947 1 G T - ReadM SNP 0004.scaffold00019 589959 1 C T - ReadM SNP 0004.scaffold00019 590031 1 C T - ReadM SNP 0004.scaffold00019 590100 1 C A - ReadM SNP 0004.scaffold00019 590113 1 T G - ReadM SNP 0004.scaffold00019 590139 1 G A - ReadM SNP 0004.scaffold00019 590207 1 A C - ReadM SNP 0004.scaffold00019 590216 1 T C - ReadM SNP 0004.scaffold00019 590353 1 A C - ReadM SNP 0004.scaffold00019 590427 1 G A - ReadM SNP 0004.scaffold00019 590472 1 G C - ReadM SNP 0004.scaffold00019 590476 1 G A - ReadM SNP 0004.scaffold00019 590480 1 T A - ReadM SNP 0004.scaffold00019 590573 1 T C - ReadM SNP 0004.scaffold00019 590581 1 A G - ReadM SNP 0004.scaffold00019 590649 1 G T - ReadM SNP 0004.scaffold00019 590863 1 G C - ReadM SNP 0004.scaffold00019 590918 1 A G - ReadM SNP 0004.scaffold00019 591016 1 C T - ReadM SNP 0004.scaffold00019 591034 1 C A - ReadM SNP 0004.scaffold00019 591064 1 C T - ReadM SNP 0004.scaffold00019 591100 1 A C - ReadM SNP 0004.scaffold00019 591139 1 G A - ReadM SNP 0004.scaffold00019 591241 1 G C - ReadM SNP 0004.scaffold00019 591243 1 G C - ReadM SNP 0004.scaffold00019 591270 1 A G - ReadM SNP 0004.scaffold00019 591545 1 G C - ReadM SNP 0004.scaffold00019 591610 1 C T - ReadM SNP 0004.scaffold00019 591661 1 C T - ReadM SNP 0004.scaffold00019 591706 2 AA GG - ReadM SNP 0004.scaffold00019 591808 1 C T - ReadM SNP 0004.scaffold00019 591811 1 C G - ReadM SNP 0004.scaffold00019 591856 1 T C - ReadM SNP 0004.scaffold00019 591863 1 A G - ReadM SNP 0004.scaffold00019 591900 1 G A - ReadM SNP 0004.scaffold00019 591960 1 C T - ReadM SNP 0004.scaffold00019 591963 1 C T - ReadM SNP 0004.scaffold00019 592165 1 T G - ReadM SNP 0004.scaffold00019 592199 1 A G - ReadM SNP 0004.scaffold00019 592246 1 C T - ReadM SNP 0004.scaffold00019 592287 1 C A - ReadM INDEL 0004.scaffold00019 592345 1 . A - ReadM SNP 0004.scaffold00019 592369 1 C T - ReadM SNP 0004.scaffold00019 592447 1 T C - ReadM SNP 0004.scaffold00019 592559 1 C A - ReadM SNP 0004.scaffold00019 592582 1 A C - ReadM SNP 0004.scaffold00019 592600 1 G A - ReadM SNP 0004.scaffold00019 592824 1 C G - ReadM SNP 0004.scaffold00019 592831 1 C T - ReadM SNP 0004.scaffold00019 593038 1 G A - ReadM SNP 0004.scaffold00019 593166 1 G A - ReadM SNP 0004.scaffold00019 593210 1 G A - ReadM SNP 0004.scaffold00019 593229 1 G A - ReadM SNP 0004.scaffold00019 593239 1 G A - ReadM SNP 0004.scaffold00019 593314 1 C A - ReadM SNP 0004.scaffold00019 593361 1 A G - ReadM SNP 0004.scaffold00019 593393 1 T C - ReadM SNP 0004.scaffold00019 593399 1 T C - ReadM SNP 0004.scaffold00019 593469 1 G A - ReadM SNP 0004.scaffold00019 593473 1 A G - ReadM SNP 0004.scaffold00019 593496 1 A G - ReadM SNP 0004.scaffold00019 593570 1 G T - ReadM SNP 0004.scaffold00019 593601 1 T C - ReadM SNP 0004.scaffold00019 593857 1 T G - ReadM SNP 0004.scaffold00019 593874 1 T C - ReadM SNP 0004.scaffold00019 593943 1 G A - ReadM SNP 0004.scaffold00019 594041 1 T C - ReadM SNP 0004.scaffold00019 594099 1 C T - ReadM SNP 0004.scaffold00019 594147 1 C T - ReadM SNP 0004.scaffold00019 594154 1 G C - ReadM SNP 0004.scaffold00019 594159 1 T A - ReadM SNP 0004.scaffold00019 594225 1 A C - ReadM SNP 0004.scaffold00019 594228 1 A G - ReadM SNP 0004.scaffold00019 594230 1 A G - ReadM SNP 0004.scaffold00019 594383 1 A G - ReadM SNP 0004.scaffold00019 594389 1 A G - ReadM SNP 0004.scaffold00019 594394 1 T C - ReadM SNP 0004.scaffold00019 594695 1 C T - ReadM SNP 0004.scaffold00019 594819 1 T A - ReadM SNP 0004.scaffold00019 594844 1 C T - ReadM SNP 0004.scaffold00019 594955 1 T C - ReadM SNP 0004.scaffold00019 594973 1 G T - ReadM SNP 0004.scaffold00019 594989 1 T C - ReadM SNP 0004.scaffold00019 595009 1 T G - ReadM SNP 0004.scaffold00019 595132 1 A T - ReadM SNP 0004.scaffold00019 595158 1 G A - ReadM SNP 0004.scaffold00019 595454 1 G A - Both SNP 0004.scaffold00019 595481 1 C T scaffold16027 ScafM SNP 0004.scaffold00019 595522 1 T A scaffold16027 Both SNP 0004.scaffold00019 595603 1 T G scaffold16027 Both SNP 0004.scaffold00019 595646 1 G A scaffold16027 ReadM SNP 0004.scaffold00019 595657 1 G T - ReadM SNP 0004.scaffold00019 595680 1 G A - ReadM SNP 0004.scaffold00019 595761 1 T G - ReadM SNP 0004.scaffold00019 595886 1 T A - ReadM SNP 0004.scaffold00019 595907 1 T A - ReadM SNP 0004.scaffold00019 595917 1 A G - ReadM SNP 0004.scaffold00019 596052 1 A T - ReadM SNP 0004.scaffold00019 596088 1 C T - ReadM SNP 0004.scaffold00019 596115 1 A G - ReadM SNP 0004.scaffold00019 596162 1 T C - ReadM SNP 0004.scaffold00019 596206 1 A G - ReadM SNP 0004.scaffold00019 596259 1 T A - Both SNP 0004.scaffold00019 596284 1 G T scaffold16027 ScafM SNP 0004.scaffold00019 596317 1 T G scaffold16027 ScafM SNP 0004.scaffold00019 596321 1 G C scaffold16027 ScafM SNP 0004.scaffold00019 596332 1 T C scaffold16027 ScafM INDEL 0004.scaffold00019 596465 1 A . scaffold16027 Both SNP 0004.scaffold00019 596490 1 A C scaffold16027 ScafM SNP 0004.scaffold00019 596531 1 T C scaffold16027 Both SNP 0004.scaffold00019 596567 1 T G scaffold16027 Both SNP 0004.scaffold00019 596573 1 G A scaffold16027 Both SNP 0004.scaffold00019 596631 1 C T scaffold16027 ScafM SNP 0004.scaffold00019 596649 2 TA CC scaffold16027 ReadM SNP 0004.scaffold00019 596681 1 T C - ReadM SNP 0004.scaffold00019 596707 1 A G - ReadM SNP 0004.scaffold00019 596729 1 C T - ReadM SNP 0004.scaffold00019 596856 1 A C - ReadM SNP 0004.scaffold00019 597001 1 A G - ReadM SNP 0004.scaffold00019 597021 1 C T - ReadM SNP 0004.scaffold00019 597110 1 A C - ReadM SNP 0004.scaffold00019 597197 1 G A - ReadM SNP 0004.scaffold00019 597418 1 C T - ReadM SNP 0004.scaffold00019 597686 1 G A - ReadM SNP 0004.scaffold00019 597733 1 C T - Both SNP 0004.scaffold00019 597794 1 A G scaffold16027 ScafM SNP 0004.scaffold00019 597801 1 T A scaffold16027 ScafM SNP 0004.scaffold00019 597926 1 G A scaffold16027 ScafM SNP 0004.scaffold00019 597932 1 G A scaffold16027 ReadM SNP 0004.scaffold00019 598261 1 A T - ReadM SNP 0004.scaffold00019 598349 1 A G - ReadM SNP 0004.scaffold00019 598369 1 C A - ReadM SNP 0004.scaffold00019 598534 1 T G - ReadM SNP 0004.scaffold00019 598541 1 C T - ReadM SNP 0004.scaffold00019 598785 1 T G - ReadM SNP 0004.scaffold00019 598840 1 A C - ReadM SNP 0004.scaffold00019 598870 1 A G - ReadM SNP 0004.scaffold00019 598879 1 C A - ReadM SNP 0004.scaffold00019 598903 1 G C - ReadM SNP 0004.scaffold00019 598956 1 A C - ReadM SNP 0004.scaffold00019 598982 1 A G - ReadM SNP 0004.scaffold00019 598986 1 G A - ReadM SNP 0004.scaffold00019 599025 1 G A - ReadM SNP 0004.scaffold00019 599047 1 C T - ReadM SNP 0004.scaffold00019 599080 1 G A - ReadM SNP 0004.scaffold00019 599113 1 C T - ReadM SNP 0004.scaffold00019 599215 1 C T - ReadM SNP 0004.scaffold00019 599226 1 A G - ReadM SNP 0004.scaffold00019 599272 1 G A - ReadM SNP 0004.scaffold00019 599317 1 A G - ReadM INDEL 0004.scaffold00019 599321 2 .. GA - ReadM SNP 0004.scaffold00019 599441 1 G A - ScafM INDEL 0004.scaffold00019 599566 1 G . scaffold16027 ScafM SNP 0004.scaffold00019 599593 1 C T scaffold16027 ScafM SNP 0004.scaffold00019 599595 1 G A scaffold16027 Both SNP 0004.scaffold00019 599649 1 T A scaffold16027 Both SNP 0004.scaffold00019 599667 1 A C scaffold16027 Both SNP 0004.scaffold00019 599751 1 C A scaffold16027 Both SNP 0004.scaffold00019 599811 1 G T scaffold16027 Both SNP 0004.scaffold00019 599815 1 G A scaffold16027 ScafM SNP 0004.scaffold00019 599855 2 AA GG scaffold16027 ScafM SNP 0004.scaffold00019 599872 1 T C scaffold16027 ScafM SNP 0004.scaffold00019 599904 1 G A scaffold16027 ScafM SNP 0004.scaffold00019 599921 1 T C scaffold16027 ScafM SNP 0004.scaffold00019 599926 2 TT AC scaffold16027 Both SNP 0004.scaffold00019 599975 1 C T scaffold16027 Both SNP 0004.scaffold00019 599984 1 T A scaffold16027 Both SNP 0004.scaffold00019 600043 1 A G scaffold16027 Both SNP 0004.scaffold00019 600078 1 C A scaffold16027 Both SNP 0004.scaffold00019 600084 1 T C scaffold16027 Both SNP 0004.scaffold00019 600091 1 C T scaffold16027 Both SNP 0004.scaffold00019 600171 1 G T scaffold16027 Both SNP 0004.scaffold00019 600210 1 C A scaffold16027 Both SNP 0004.scaffold00019 600295 1 A G scaffold16027 Both SNP 0004.scaffold00019 600300 1 G A scaffold16027 Both SNP 0004.scaffold00019 600336 1 T G scaffold16027 Both SNP 0004.scaffold00019 600342 1 G A scaffold16027 ReadM SNP 0004.scaffold00019 600477 1 A T - ReadM SNP 0004.scaffold00019 600481 1 C G - ReadM SNP 0004.scaffold00019 602168 1 G A - ReadM SNP 0004.scaffold00019 602185 1 G A - ReadM SNP 0004.scaffold00019 603048 1 C T - ReadM SNP 0004.scaffold00019 603161 1 C T - ReadM SNP 0004.scaffold00019 603340 1 C T - Both SNP 0004.scaffold00019 603389 1 A T scaffold719 ScafM SNP 0004.scaffold00019 603421 1 C T scaffold719 ScafM SNP 0004.scaffold00019 603475 1 C T scaffold719 ScafM INDEL 0004.scaffold00019 603524 3 TGT ... scaffold719 ScafM INDEL 0004.scaffold00019 603555 4 TATA .... scaffold719 ScafM SNP 0004.scaffold00019 603616 1 G T scaffold719 ScafM SNP 0004.scaffold00019 603940 1 A G scaffold4792 ScafM INDEL 0004.scaffold00019 603943 3 ... AAT scaffold4792 ScafM SNP 0004.scaffold00019 603993 1 T A scaffold4792 ScafM SNP 0004.scaffold00019 604020 1 A G scaffold4792 ScafM SNP 0004.scaffold00019 604085 1 G T scaffold4792 ScafM SNP 0004.scaffold00019 604093 1 G A scaffold4792 ScafM SNP 0004.scaffold00019 605140 1 A T scaffold719 ScafM SNP 0004.scaffold00019 605191 1 T A scaffold719 ScafM SNP 0004.scaffold00019 605224 1 C A scaffold719 ScafM SNP 0004.scaffold00019 605231 1 C T scaffold719 ScafM SNP 0004.scaffold00019 605243 1 T C scaffold719 ScafM SNP 0004.scaffold00019 605291 1 C T scaffold719 ScafM SNP 0004.scaffold00019 605293 1 A T scaffold719 ScafM SNP 0004.scaffold00019 605321 1 G A scaffold719 Both SNP 0004.scaffold00019 605339 1 T C scaffold719 ScafM SNP 0004.scaffold00019 605351 1 C G scaffold719 ScafM SNP 0004.scaffold00019 605369 1 G A scaffold719 ReadM SNP 0004.scaffold00019 605488 1 C G - ReadM SNP 0004.scaffold00019 605573 1 T G - ReadM SNP 0004.scaffold00019 605781 1 T C - ReadM INDEL 0004.scaffold00019 605840 3 ... TTC - ReadM SNP 0004.scaffold00019 605977 1 A G - ReadM SNP 0004.scaffold00019 606000 1 A T - ReadM SNP 0004.scaffold00019 606108 1 C A - ReadM SNP 0004.scaffold00019 606200 1 T C - ReadM SNP 0004.scaffold00019 606223 1 T C - ReadM SNP 0004.scaffold00019 606479 1 T C - ReadM SNP 0004.scaffold00019 606516 1 T C - ReadM SNP 0004.scaffold00019 606758 1 A T - ReadM SNP 0004.scaffold00019 606922 1 G A - ReadM SNP 0004.scaffold00019 607015 1 C A - ReadM SNP 0004.scaffold00019 607106 1 T C - ReadM SNP 0004.scaffold00019 607255 1 C T - ReadM SNP 0004.scaffold00019 607436 1 A G - ReadM SNP 0004.scaffold00019 607493 1 A C - ReadM SNP 0004.scaffold00019 607581 1 G A - ReadM SNP 0004.scaffold00019 607600 1 A G - ReadM SNP 0004.scaffold00019 607670 1 T C - ReadM SNP 0004.scaffold00019 607679 1 T C - ReadM SNP 0004.scaffold00019 608383 1 A T - ReadM SNP 0004.scaffold00019 608411 1 C T - ReadM SNP 0004.scaffold00019 608564 1 G A - ReadM SNP 0004.scaffold00019 608646 1 T G - ReadM SNP 0004.scaffold00019 608707 1 T C - ReadM SNP 0004.scaffold00019 608809 1 A T - ReadM SNP 0004.scaffold00019 608814 1 G A - ReadM SNP 0004.scaffold00019 608858 1 T C - ReadM SNP 0004.scaffold00019 608961 1 G T - ReadM SNP 0004.scaffold00019 609120 1 G A - ReadM INDEL 0004.scaffold00019 609249 1 A . - ReadM SNP 0004.scaffold00019 609458 1 G C - ReadM SNP 0004.scaffold00019 609550 1 A C - ReadM SNP 0004.scaffold00019 609594 1 C G - ReadM SNP 0004.scaffold00019 609780 1 A G - ReadM SNP 0004.scaffold00019 609854 1 A G - ReadM SNP 0004.scaffold00019 610310 1 G A - Both SNP 0004.scaffold00019 610338 1 A C scaffold6588 ScafM SNP 0004.scaffold00019 610381 1 T A scaffold6588 ScafM SNP 0004.scaffold00019 610397 1 T C scaffold6588 ScafM SNP 0004.scaffold00019 610457 1 T C scaffold6588 ScafM SNP 0004.scaffold00019 610460 1 G T scaffold6588 ScafM SNP 0004.scaffold00019 610464 1 T G scaffold6588 ScafM SNP 0004.scaffold00019 610476 1 A C scaffold6588 Both SNP 0004.scaffold00019 610599 1 A G scaffold6588 Both SNP 0004.scaffold00019 610602 1 G C scaffold6588 ScafM SNP 0004.scaffold00019 610693 1 A T scaffold6588 ScafM SNP 0004.scaffold00019 610718 1 T C scaffold6588 ScafM SNP 0004.scaffold00019 610755 1 T C scaffold6588 ScafM SNP 0004.scaffold00019 610817 1 G A scaffold6588 ScafM SNP 0004.scaffold00019 610842 1 T A scaffold6588 ScafM SNP 0004.scaffold00019 610854 1 C G scaffold6588 ScafM SNP 0004.scaffold00019 614612 1 A G scaffold18848 ScafM SNP 0004.scaffold00019 614727 2 TG AA scaffold18848 ReadM SNP 0004.scaffold00019 614915 1 C T - ReadM SNP 0004.scaffold00019 614941 1 C A - ReadM SNP 0004.scaffold00019 615787 1 C T - ReadM SNP 0004.scaffold00019 615851 1 A G - ReadM SNP 0004.scaffold00019 616231 1 G A - ReadM SNP 0004.scaffold00019 616296 1 A G - ReadM SNP 0004.scaffold00019 616321 1 A C - ReadM SNP 0004.scaffold00019 616661 1 A G - ReadM SNP 0004.scaffold00019 616665 1 C A - ReadM SNP 0004.scaffold00019 616696 1 G A - ReadM SNP 0004.scaffold00019 616951 1 A G - ReadM SNP 0004.scaffold00019 616968 1 T C - ReadM INDEL 0004.scaffold00019 617025 1 A . - ReadM SNP 0004.scaffold00019 617152 1 C T - ReadM SNP 0004.scaffold00019 617165 1 A G - ReadM INDEL 0004.scaffold00019 617760 1 . A - ReadM SNP 0004.scaffold00019 617793 1 A G - ReadM SNP 0004.scaffold00019 618214 1 T C - ReadM SNP 0004.scaffold00019 618237 1 A G - ReadM SNP 0004.scaffold00019 618924 1 C T - ReadM SNP 0004.scaffold00019 618986 1 C G - ReadM SNP 0004.scaffold00019 619031 1 C T - ReadM SNP 0004.scaffold00019 619085 1 T A - ReadM SNP 0004.scaffold00019 619100 1 T C - ReadM SNP 0004.scaffold00019 619118 1 A G - ReadM SNP 0004.scaffold00019 619142 1 A T - ReadM SNP 0004.scaffold00019 619224 1 G A - ReadM SNP 0004.scaffold00019 619249 1 T C - ReadM SNP 0004.scaffold00019 621948 1 G A - ReadM SNP 0004.scaffold00019 622025 1 T C - ReadM SNP 0004.scaffold00019 622040 1 G C - ReadM SNP 0004.scaffold00019 622235 1 G C - ReadM SNP 0004.scaffold00019 622562 1 A T - ReadM SNP 0004.scaffold00019 623002 1 A G - ReadM SNP 0004.scaffold00019 623039 1 G T - ReadM SNP 0004.scaffold00019 623072 1 G T - ReadM SNP 0004.scaffold00019 623181 1 C A - ReadM SNP 0004.scaffold00019 623186 1 G A - ReadM SNP 0004.scaffold00019 623216 1 A C - ReadM SNP 0004.scaffold00019 623230 1 C A - ReadM SNP 0004.scaffold00019 623376 1 A T - ReadM SNP 0004.scaffold00019 623389 1 G A - ReadM SNP 0004.scaffold00019 623627 1 T C - ReadM SNP 0004.scaffold00019 623641 1 A G - ReadM SNP 0004.scaffold00019 623651 1 C G - ReadM SNP 0004.scaffold00019 623706 1 T C - ReadM SNP 0004.scaffold00019 623953 1 C T - ReadM SNP 0004.scaffold00019 623984 1 C A - ReadM SNP 0004.scaffold00019 623995 1 G T - ReadM INDEL 0004.scaffold00019 624037 1 . C - ReadM SNP 0004.scaffold00019 624180 1 G A - ReadM SNP 0004.scaffold00019 624264 1 T C - ReadM SNP 0004.scaffold00019 624309 1 A G - ReadM SNP 0004.scaffold00019 624376 1 C T - ReadM SNP 0004.scaffold00019 624461 1 G A - ReadM SNP 0004.scaffold00019 624474 1 C G - ReadM SNP 0004.scaffold00019 624508 1 A G - ReadM SNP 0004.scaffold00019 624512 1 T G - ReadM SNP 0004.scaffold00019 624597 1 C T - ReadM SNP 0004.scaffold00019 624642 1 A G - ReadM SNP 0004.scaffold00019 624658 1 T C - ReadM SNP 0004.scaffold00019 624735 1 G A - ReadM SNP 0004.scaffold00019 624781 1 T C - ReadM SNP 0004.scaffold00019 624797 1 C T - ReadM SNP 0004.scaffold00019 624807 1 T C - ReadM SNP 0004.scaffold00019 624818 1 T C - ReadM SNP 0004.scaffold00019 625059 1 G A - ReadM SNP 0004.scaffold00019 625062 1 A G - ReadM SNP 0004.scaffold00019 625064 1 C T - Both SNP 0004.scaffold00019 625152 1 G A scaffold18848 Both SNP 0004.scaffold00019 625230 1 C T scaffold18848 Both SNP 0004.scaffold00019 625322 1 T C scaffold18848 Both INDEL 0004.scaffold00019 625507 1 G . scaffold18848 Both SNP 0004.scaffold00019 625517 1 C T scaffold18848 Both SNP 0004.scaffold00019 625661 1 A G scaffold18848 Both SNP 0004.scaffold00019 625771 1 G A scaffold18848 Both SNP 0004.scaffold00019 625800 1 T A scaffold18848 Both SNP 0004.scaffold00019 625810 1 A G scaffold18848 ScafM SNP 0004.scaffold00019 625895 1 T A scaffold18848 Both SNP 0004.scaffold00019 625993 1 A G scaffold18848 ScafM SNP 0004.scaffold00019 626049 1 G A scaffold18848 ScafM SNP 0004.scaffold00019 626079 1 G T scaffold18848 Both SNP 0004.scaffold00019 626226 1 A T scaffold18848 Both SNP 0004.scaffold00019 626254 1 T G scaffold18848 Both SNP 0004.scaffold00019 626257 1 A G scaffold18848 ReadM SNP 0004.scaffold00019 626500 1 A G - ReadM SNP 0004.scaffold00019 626665 1 A G - ReadM SNP 0004.scaffold00019 627035 1 T C - ReadM SNP 0004.scaffold00019 627039 1 A T - ReadM SNP 0004.scaffold00019 627197 1 G T - ReadM SNP 0004.scaffold00019 627231 1 G A - ReadM SNP 0004.scaffold00019 627373 1 C T - ReadM SNP 0004.scaffold00019 627414 1 T G - ReadM SNP 0004.scaffold00019 627419 1 C T - ReadM SNP 0004.scaffold00019 627431 1 A G - ReadM SNP 0004.scaffold00019 627557 1 A C - ReadM SNP 0004.scaffold00019 627563 1 T G - ReadM SNP 0004.scaffold00019 627587 1 G A - ReadM SNP 0004.scaffold00019 627876 1 C T - ReadM SNP 0004.scaffold00019 627918 1 C T - ReadM SNP 0004.scaffold00019 628001 1 G A - ReadM SNP 0004.scaffold00019 628004 1 A G - ReadM SNP 0004.scaffold00019 628038 1 A G - ReadM SNP 0004.scaffold00019 629560 1 T G - ReadM SNP 0004.scaffold00019 629562 1 C A - ReadM INDEL 0004.scaffold00019 629668 1 . T - ReadM SNP 0004.scaffold00019 629709 1 T G - ReadM SNP 0004.scaffold00019 629730 1 G A - ReadM SNP 0004.scaffold00019 629868 1 T C - ReadM SNP 0004.scaffold00019 629870 1 G A - Both SNP 0004.scaffold00019 630221 1 G A scaffold14067 Both SNP 0004.scaffold00019 630302 1 A G scaffold14067 Both SNP 0004.scaffold00019 630383 1 T G scaffold14067 Both SNP 0004.scaffold00019 630401 1 A G scaffold14067 ReadM SNP 0004.scaffold00019 630599 1 A G - ReadM SNP 0004.scaffold00019 630622 1 C T - ReadM SNP 0004.scaffold00019 630644 1 G C - ReadM SNP 0004.scaffold00019 630658 1 T G - ReadM SNP 0004.scaffold00019 630893 1 C A - ReadM SNP 0004.scaffold00019 630942 1 C T - ReadM SNP 0004.scaffold00019 630970 1 T C - ReadM INDEL 0004.scaffold00019 631003 1 . G - ReadM SNP 0004.scaffold00019 631401 1 C G - ReadM SNP 0004.scaffold00019 631420 1 A C - ReadM SNP 0004.scaffold00019 631442 1 A G - ReadM SNP 0004.scaffold00019 631751 1 T A - ReadM SNP 0004.scaffold00019 631942 1 G A - ReadM SNP 0004.scaffold00019 631952 1 T G - ReadM SNP 0004.scaffold00019 632234 1 C A - ReadM SNP 0004.scaffold00019 632247 1 C G - ReadM SNP 0004.scaffold00019 632294 1 C A - ReadM SNP 0004.scaffold00019 632725 1 A G - ReadM SNP 0004.scaffold00019 632769 1 T G - ReadM SNP 0004.scaffold00019 632789 1 C A - ReadM SNP 0004.scaffold00019 632794 1 A C - ScafM SNP 0004.scaffold00019 632969 1 T C scaffold14067 ScafM SNP 0004.scaffold00019 632984 1 T G scaffold14067 ScafM SNP 0004.scaffold00019 632992 1 T G scaffold14067 ScafM SNP 0004.scaffold00019 633004 1 T C scaffold14067 ScafM SNP 0004.scaffold00019 633017 1 G A scaffold14067 ScafM SNP 0004.scaffold00019 633024 1 T C scaffold14067 ScafM SNP 0004.scaffold00019 633029 1 G A scaffold14067 ScafM SNP 0004.scaffold00019 633041 1 A C scaffold14067 ScafM INDEL 0004.scaffold00019 633059 4 AACT .... scaffold14067 ScafM INDEL 0004.scaffold00019 633094 1 G . scaffold14067 Both SNP 0004.scaffold00019 633185 1 T C scaffold14067 Both SNP 0004.scaffold00019 633227 1 G A scaffold14067 Both SNP 0004.scaffold00019 633262 1 C A scaffold14067 Both SNP 0004.scaffold00019 633274 1 G C scaffold14067 Both SNP 0004.scaffold00019 633329 1 A G scaffold14067 ScafM SNP 0004.scaffold00019 633347 2 CC TT scaffold14067 ScafM SNP 0004.scaffold00019 633351 1 C A scaffold14067 ScafM SNP 0004.scaffold00019 633404 1 C T scaffold14067 ScafM SNP 0004.scaffold00019 633415 1 T C scaffold14067 ScafM SNP 0004.scaffold00019 633417 1 A G scaffold14067 ScafM SNP 0004.scaffold00019 633430 1 C T scaffold14067 ScafM SNP 0004.scaffold00019 633452 1 G T scaffold14067 Both SNP 0004.scaffold00019 633494 1 G A scaffold14067 Both SNP 0004.scaffold00019 633553 1 G C scaffold14067 Both SNP 0004.scaffold00019 633614 1 G C scaffold14067 ScafM SNP 0004.scaffold00019 633622 1 T A scaffold14067 ScafM SNP 0004.scaffold00019 633642 1 C T scaffold14067 ScafM SNP 0004.scaffold00019 633653 1 C T scaffold14067 ScafM SNP 0004.scaffold00019 633665 1 T G scaffold14067 ScafM INDEL 0004.scaffold00019 633672 5 ..... TCAGC scaffold14067 Both SNP 0004.scaffold00019 633804 1 G T scaffold14067 Both SNP 0004.scaffold00019 633844 1 T C scaffold14067 Both SNP 0004.scaffold00019 633932 1 A G scaffold14067 ScafM SNP 0004.scaffold00019 633969 1 T A scaffold14067 ScafM SNP 0004.scaffold00019 633971 1 C T scaffold14067 Both SNP 0004.scaffold00019 634035 1 G A scaffold14067 Both SNP 0004.scaffold00019 634041 1 T C scaffold14067 Both SNP 0004.scaffold00019 634112 1 G A scaffold14067 Both SNP 0004.scaffold00019 634115 1 C G scaffold14067 Both SNP 0004.scaffold00019 634124 1 A G scaffold14067 Both SNP 0004.scaffold00019 634197 1 T A scaffold14067 Both SNP 0004.scaffold00019 634210 1 T A scaffold14067 Both SNP 0004.scaffold00019 634244 1 A G scaffold14067 ScafM SNP 0004.scaffold00019 634253 1 A G scaffold14067 Both SNP 0004.scaffold00019 634293 1 G A scaffold14067 Both SNP 0004.scaffold00019 634450 1 A T scaffold14067 Both SNP 0004.scaffold00019 634556 1 A T scaffold14067 Both SNP 0004.scaffold00019 634606 1 G A scaffold14067 Both SNP 0004.scaffold00019 634635 1 T C scaffold14067 Both SNP 0004.scaffold00019 634645 1 G C scaffold14067 Both SNP 0004.scaffold00019 634729 1 T G scaffold14067 ReadM SNP 0004.scaffold00019 634955 1 T C - ReadM SNP 0004.scaffold00019 634962 1 G C - Both SNP 0004.scaffold00019 635070 1 T C scaffold14067 Both SNP 0004.scaffold00019 635125 1 T C scaffold14067 Both SNP 0004.scaffold00019 635139 1 C G scaffold14067 ReadM SNP 0004.scaffold00019 635175 1 A G - ReadM SNP 0004.scaffold00019 635204 1 T C - Both SNP 0004.scaffold00019 635482 1 C T scaffold14067 Both SNP 0004.scaffold00019 635525 1 C G scaffold14067 ScafM INDEL 0004.scaffold00019 635755 40 ........................................ TAATAGTTAACATGCTCACCTACTATAAATATTGCTTCAT scaffold14067 ScafM SNP 0004.scaffold00019 635789 1 T C scaffold14067 ScafM SNP 0004.scaffold00019 635872 1 T G scaffold14067 ScafM INDEL 0004.scaffold00019 635918 9 ......... TCAACAATA scaffold14067 ScafM SNP 0004.scaffold00019 635999 1 G A scaffold14067 ScafM SNP 0004.scaffold00019 636013 1 A G scaffold14067 ScafM SNP 0004.scaffold00019 636241 1 G A scaffold26491 ScafM SNP 0004.scaffold00019 636325 1 C A scaffold26491 ScafM SNP 0004.scaffold00019 636332 1 T G scaffold26491 ScafM SNP 0004.scaffold00019 636344 2 CT TG scaffold26491 ScafM INDEL 0004.scaffold00019 636353 3 AAC ... scaffold26491 ScafM INDEL 0004.scaffold00019 636362 1 A . scaffold26491 ScafM SNP 0004.scaffold00019 636376 1 G T scaffold26491 Both SNP 0004.scaffold00019 636424 1 A T scaffold26491 Both SNP 0004.scaffold00019 636445 1 T A scaffold26491 Both SNP 0004.scaffold00019 636473 1 G T scaffold26491 Both SNP 0004.scaffold00019 636534 1 T C scaffold26491 Both SNP 0004.scaffold00019 636595 1 C A scaffold26491 Both SNP 0004.scaffold00019 636709 1 C T scaffold26491 Both SNP 0004.scaffold00019 636779 1 G T scaffold26491 ScafM SNP 0004.scaffold00019 636798 1 T C scaffold26491 ScafM SNP 0004.scaffold00019 636849 1 A G scaffold26491 ScafM SNP 0004.scaffold00019 636870 1 A T scaffold26491 ScafM SNP 0004.scaffold00019 636895 1 A C scaffold26491 ScafM SNP 0004.scaffold00019 636919 1 A G scaffold26491 ReadM SNP 0004.scaffold00019 650244 1 C T - ReadM SNP 0004.scaffold00019 650261 1 A T - ReadM INDEL 0004.scaffold00019 650392 3 ... GTC - ReadM SNP 0004.scaffold00019 653099 1 G A - ReadM SNP 0004.scaffold00019 653124 1 A T - ReadM SNP 0004.scaffold00019 653228 1 T C - ReadM SNP 0004.scaffold00019 653271 1 A G - ReadM SNP 0004.scaffold00019 653275 1 A G - ReadM SNP 0004.scaffold00019 653315 1 T C - ReadM SNP 0004.scaffold00019 653680 1 C G - ReadM SNP 0004.scaffold00019 653780 1 T G - ReadM SNP 0004.scaffold00019 653786 1 T A - ReadM SNP 0004.scaffold00019 654167 1 T A - ReadM SNP 0004.scaffold00019 654788 1 A G - ReadM SNP 0004.scaffold00019 654862 1 A G - ReadM SNP 0004.scaffold00019 654903 1 G T - ReadM SNP 0004.scaffold00019 655620 1 G C - ReadM INDEL 0004.scaffold00019 655679 1 G . - ReadM SNP 0004.scaffold00019 655974 1 A G - ReadM SNP 0004.scaffold00019 656000 1 A T - ReadM SNP 0004.scaffold00019 656053 1 T G - ReadM SNP 0004.scaffold00019 656095 1 T C - ReadM SNP 0004.scaffold00019 656122 1 C A - ReadM SNP 0004.scaffold00019 656171 1 A C - ReadM SNP 0004.scaffold00019 656176 1 T C - ReadM SNP 0004.scaffold00019 656188 1 G C - ReadM SNP 0004.scaffold00019 656249 1 A G - ReadM INDEL 0004.scaffold00019 656447 1 A . - ReadM SNP 0004.scaffold00019 656459 1 A T - ReadM SNP 0004.scaffold00019 656473 1 G C - ReadM SNP 0004.scaffold00019 656541 1 C G - ReadM SNP 0004.scaffold00019 656544 1 A G - ReadM SNP 0004.scaffold00019 656621 1 A T - ReadM SNP 0004.scaffold00019 656646 1 A G - ReadM SNP 0004.scaffold00019 656794 1 G A - ReadM SNP 0004.scaffold00019 656952 1 T C - ReadM SNP 0004.scaffold00019 656974 1 A C - ReadM SNP 0004.scaffold00019 657005 1 G C - ReadM SNP 0004.scaffold00019 657256 1 A G - ReadM SNP 0004.scaffold00019 657272 1 G A - ReadM SNP 0004.scaffold00019 657442 1 G A - ReadM SNP 0004.scaffold00019 657479 1 G C - ReadM SNP 0004.scaffold00019 657595 1 T G - ReadM SNP 0004.scaffold00019 657616 1 C T - ReadM SNP 0004.scaffold00019 657625 1 C T - ReadM SNP 0004.scaffold00019 657726 1 A G - ReadM SNP 0004.scaffold00019 657784 1 C T - ReadM SNP 0004.scaffold00019 657817 1 A G - ReadM SNP 0004.scaffold00019 657867 1 C T - ReadM SNP 0004.scaffold00019 657877 1 T G - ReadM SNP 0004.scaffold00019 657911 1 A G - ReadM SNP 0004.scaffold00019 657941 1 C T - ReadM SNP 0004.scaffold00019 657984 1 A T - ReadM SNP 0004.scaffold00019 658026 1 T A - ReadM SNP 0004.scaffold00019 658050 1 A T - ReadM SNP 0004.scaffold00019 658074 1 T G - ReadM SNP 0004.scaffold00019 658092 1 C A - ReadM SNP 0004.scaffold00019 658194 1 A G - ReadM SNP 0004.scaffold00019 658213 1 C G - ReadM INDEL 0004.scaffold00019 658345 3 ... CAA - ReadM SNP 0004.scaffold00019 658414 1 C T - ReadM SNP 0004.scaffold00019 658442 1 G A - ReadM SNP 0004.scaffold00019 658483 1 C T - ReadM SNP 0004.scaffold00019 658584 1 C T - ReadM SNP 0004.scaffold00019 658647 1 C T - ReadM SNP 0004.scaffold00019 658689 1 C T - ReadM SNP 0004.scaffold00019 658760 1 C T - ReadM SNP 0004.scaffold00019 658871 1 A G - ReadM SNP 0004.scaffold00019 659098 1 A G - ReadM INDEL 0004.scaffold00019 659161 1 A . - ReadM SNP 0004.scaffold00019 659250 1 T G - ReadM SNP 0004.scaffold00019 659350 1 T C - ReadM SNP 0004.scaffold00019 659369 1 C G - ReadM SNP 0004.scaffold00019 659443 1 T C - ReadM SNP 0004.scaffold00019 659533 1 A G - ReadM SNP 0004.scaffold00019 659550 1 A G - ReadM SNP 0004.scaffold00019 659668 1 G A - ReadM SNP 0004.scaffold00019 659709 1 G A - ReadM SNP 0004.scaffold00019 659803 1 A G - ReadM SNP 0004.scaffold00019 659940 1 A G - ReadM SNP 0004.scaffold00019 659949 1 T C - ReadM SNP 0004.scaffold00019 659988 1 T A - ReadM SNP 0004.scaffold00019 660029 1 A G - ReadM INDEL 0004.scaffold00019 660074 1 C . - ReadM SNP 0004.scaffold00019 660177 1 C T - ReadM SNP 0004.scaffold00019 660195 1 T C - ReadM SNP 0004.scaffold00019 660350 1 A G - ReadM SNP 0004.scaffold00019 660436 1 A G - ScafM INDEL 0004.scaffold00019 660513 5 ..... AAAAA scaffold24716 Both SNP 0004.scaffold00019 660581 1 G A scaffold24716 Both SNP 0004.scaffold00019 660644 1 T C scaffold24716 Both SNP 0004.scaffold00019 660648 1 T G scaffold24716 Both SNP 0004.scaffold00019 660753 1 T C scaffold24716 Both SNP 0004.scaffold00019 660773 1 C T scaffold24716 Both SNP 0004.scaffold00019 660837 1 A G scaffold24716 ReadM SNP 0004.scaffold00019 661010 1 T C - ReadM SNP 0004.scaffold00019 661031 1 T C - ReadM SNP 0004.scaffold00019 661044 1 C T - ReadM SNP 0004.scaffold00019 661086 1 T C - ReadM SNP 0004.scaffold00019 661117 1 C T - ReadM INDEL 0004.scaffold00019 661126 1 . T - ReadM SNP 0004.scaffold00019 661184 1 T G - ReadM SNP 0004.scaffold00019 661225 1 T C - ReadM SNP 0004.scaffold00019 661347 1 C A - ReadM SNP 0004.scaffold00019 661372 1 A T - ReadM SNP 0004.scaffold00019 661402 1 A T - ReadM SNP 0004.scaffold00019 661434 1 G A - ReadM SNP 0004.scaffold00019 661457 1 T G - ReadM SNP 0004.scaffold00019 661486 1 A G - ReadM SNP 0004.scaffold00019 661601 1 A T - ReadM SNP 0004.scaffold00019 661702 1 C T - ReadM SNP 0004.scaffold00019 661763 1 G A - ReadM SNP 0004.scaffold00019 661803 1 A G - ReadM SNP 0004.scaffold00019 661858 1 A G - ReadM SNP 0004.scaffold00019 661974 1 T C - ReadM SNP 0004.scaffold00019 661987 1 A G - ReadM SNP 0004.scaffold00019 662072 1 A G - ReadM SNP 0004.scaffold00019 662075 1 C T - ReadM SNP 0004.scaffold00019 662260 1 G T - ReadM SNP 0004.scaffold00019 662325 1 G T - ReadM SNP 0004.scaffold00019 662343 1 A C - ReadM SNP 0004.scaffold00019 662354 1 C T - ReadM SNP 0004.scaffold00019 662461 1 G T - ReadM SNP 0004.scaffold00019 662539 1 G A - ReadM SNP 0004.scaffold00019 662573 1 T C - ReadM SNP 0004.scaffold00019 662620 1 C T - ReadM SNP 0004.scaffold00019 662682 1 C T - ReadM SNP 0004.scaffold00019 662750 1 C A - ReadM SNP 0004.scaffold00019 662799 1 C T - ReadM SNP 0004.scaffold00019 663064 1 A G - ScafM SNP 0004.scaffold00019 663177 1 G C scaffold24716 ReadM SNP 0004.scaffold00019 663259 1 T A - ReadM SNP 0004.scaffold00019 663289 1 A T - ReadM SNP 0004.scaffold00019 663368 1 G T - ReadM SNP 0004.scaffold00019 663407 1 C A - ReadM SNP 0004.scaffold00019 663424 1 A G - ReadM SNP 0004.scaffold00019 663426 1 T G - Both SNP 0004.scaffold00019 663489 1 C A scaffold24716 Both SNP 0004.scaffold00019 663575 1 A C scaffold24716 Both SNP 0004.scaffold00019 663649 1 A T scaffold24716 Both SNP 0004.scaffold00019 663656 1 G T scaffold24716 Both SNP 0004.scaffold00019 663675 1 C G scaffold24716 Both SNP 0004.scaffold00019 663738 1 G A scaffold24716 ScafM SNP 0004.scaffold00019 663772 1 A T scaffold24716 ScafM SNP 0004.scaffold00019 663786 1 T C scaffold24716 ScafM INDEL 0004.scaffold00019 663840 1 . G scaffold24716 ScafM SNP 0004.scaffold00019 663999 1 C T scaffold6311 ScafM SNP 0004.scaffold00019 664004 1 T G scaffold6311 ScafM SNP 0004.scaffold00019 664025 1 C G scaffold6311 ScafM INDEL 0004.scaffold00019 664037 3 ... ATT scaffold6311 ScafM SNP 0004.scaffold00019 664117 1 C G scaffold6311 ScafM SNP 0004.scaffold00019 664130 1 G A scaffold6311 ScafM SNP 0004.scaffold00019 664134 1 G A scaffold6311 ScafM SNP 0004.scaffold00019 664139 1 T C scaffold6311 ScafM SNP 0004.scaffold00019 664162 1 G T scaffold6311 ScafM SNP 0004.scaffold00019 664168 1 G C scaffold6311 ScafM SNP 0004.scaffold00019 664210 1 T C scaffold6311 ScafM INDEL 0004.scaffold00019 664249 1 G . scaffold6311 ReadM SNP 0004.scaffold00019 664314 1 A G - ReadM SNP 0004.scaffold00019 664378 1 T A - ReadM SNP 0004.scaffold00019 664381 1 C A - ReadM SNP 0004.scaffold00019 664547 1 A G - ReadM SNP 0004.scaffold00019 664551 1 T C - ReadM SNP 0004.scaffold00019 664729 1 C T - ReadM SNP 0004.scaffold00019 664769 1 T C - ReadM SNP 0004.scaffold00019 665276 1 G A - ReadM SNP 0004.scaffold00019 665385 1 T G - ReadM SNP 0004.scaffold00019 665723 1 T G - ReadM SNP 0004.scaffold00019 665877 1 A G - ReadM SNP 0004.scaffold00019 665924 1 A G - ReadM SNP 0004.scaffold00019 666180 1 A G - ReadM SNP 0004.scaffold00019 666215 1 C T - ReadM SNP 0004.scaffold00019 666369 1 C A - ReadM SNP 0004.scaffold00019 666437 1 C A - ReadM SNP 0004.scaffold00019 666522 1 G A - ReadM SNP 0004.scaffold00019 666698 1 T G - ReadM SNP 0004.scaffold00019 666708 1 T G - ReadM SNP 0004.scaffold00019 666972 1 T C - ReadM SNP 0004.scaffold00019 667002 1 C A - ReadM SNP 0004.scaffold00019 667065 1 A C - ReadM SNP 0004.scaffold00019 667274 1 C T - ReadM SNP 0004.scaffold00019 667345 1 C G - ReadM SNP 0004.scaffold00019 667354 1 A T - ReadM SNP 0004.scaffold00019 667519 1 T A - ReadM SNP 0004.scaffold00019 667560 1 T A - ReadM SNP 0004.scaffold00019 667741 1 C A - ReadM SNP 0004.scaffold00019 668156 1 C T - ReadM SNP 0004.scaffold00019 668166 1 G A - ReadM SNP 0004.scaffold00019 668205 1 C T - ReadM SNP 0004.scaffold00019 668249 1 T G - ReadM SNP 0004.scaffold00019 670497 1 T C - ReadM SNP 0004.scaffold00019 670537 1 T A - ReadM SNP 0004.scaffold00019 670601 1 A G - ReadM SNP 0004.scaffold00019 670730 1 A C - ReadM SNP 0004.scaffold00019 670800 1 T A - ReadM SNP 0004.scaffold00019 670807 1 G T - ReadM SNP 0004.scaffold00019 670850 1 C T - ReadM SNP 0004.scaffold00019 672432 1 T C - Both SNP 0004.scaffold00019 673343 1 T A scaffold7007 ReadM SNP 0004.scaffold00019 673564 1 T A - ReadM SNP 0004.scaffold00019 673666 1 G A - ReadM SNP 0004.scaffold00019 674001 1 G A - ReadM SNP 0004.scaffold00019 674128 1 A G - ReadM SNP 0004.scaffold00019 674156 1 T C - ReadM SNP 0004.scaffold00019 674296 1 C T - ReadM SNP 0004.scaffold00019 674372 1 T C - ReadM SNP 0004.scaffold00019 674516 1 G A - ReadM SNP 0004.scaffold00019 674560 1 G T - ScafM SNP 0004.scaffold00019 674815 1 C A scaffold7007 ScafM SNP 0004.scaffold00019 674834 1 C A scaffold7007 ScafM SNP 0004.scaffold00019 675035 1 G C scaffold7007 ScafM SNP 0004.scaffold00019 675037 1 G A scaffold7007 ReadM SNP 0004.scaffold00019 679594 1 G T - ReadM INDEL 0004.scaffold00019 679602 1 A . - ReadM SNP 0004.scaffold00019 679641 1 T G - ReadM SNP 0004.scaffold00019 680312 1 C G - ReadM SNP 0004.scaffold00019 680903 1 T G - ReadM SNP 0004.scaffold00019 681108 1 T A - ReadM SNP 0004.scaffold00019 681138 1 C A - ReadM SNP 0004.scaffold00019 681194 1 T C - ReadM SNP 0004.scaffold00019 681597 1 A G - ScafM SNP 0004.scaffold00019 682270 1 A C scaffold3996 ScafM SNP 0004.scaffold00019 682515 1 G C scaffold3996 ScafM INDEL 0004.scaffold00019 682523 1 T . scaffold3996 ScafM SNP 0004.scaffold00019 682530 1 T A scaffold3996 ScafM SNP 0004.scaffold00019 682547 1 G A scaffold3996 ScafM INDEL 0004.scaffold00019 682608 1 T . scaffold3996 ScafM SNP 0004.scaffold00019 682619 1 T C scaffold3996 ScafM SNP 0004.scaffold00019 682702 1 G A scaffold3996 ScafM SNP 0004.scaffold00019 682741 1 T C scaffold3996 ScafM SNP 0004.scaffold00019 682752 1 T A scaffold3996 ScafM SNP 0004.scaffold00019 682872 1 A T scaffold3996 ReadM SNP 0004.scaffold00019 683104 1 T C - ReadM SNP 0004.scaffold00019 683135 1 C G - ReadM SNP 0004.scaffold00019 683152 1 T A - ReadM SNP 0004.scaffold00019 683357 1 T C - ReadM SNP 0004.scaffold00019 683366 1 C T - ReadM SNP 0004.scaffold00019 683368 1 A T - ReadM SNP 0004.scaffold00019 683688 1 G C - Both SNP 0004.scaffold00019 683763 1 A C scaffold3996 Both SNP 0004.scaffold00019 683785 1 A G scaffold3996 Both INDEL 0004.scaffold00019 683826 1 . T scaffold3996 Both SNP 0004.scaffold00019 683845 1 T C scaffold3996 ScafM SNP 0004.scaffold00019 683959 1 C A scaffold3996 ScafM SNP 0004.scaffold00019 683973 1 C T scaffold3996 Both SNP 0004.scaffold00019 684008 1 C T scaffold3996 Both SNP 0004.scaffold00019 684032 1 A G scaffold3996 Both SNP 0004.scaffold00019 684038 1 G C scaffold3996 Both SNP 0004.scaffold00019 684145 1 C T scaffold3996 ReadM SNP 0004.scaffold00019 684227 1 T G - ReadM SNP 0004.scaffold00019 684283 1 T C - ReadM SNP 0004.scaffold00019 684301 1 A G - Both SNP 0004.scaffold00019 684524 1 G T scaffold3996 Both SNP 0004.scaffold00019 684563 1 T C scaffold3996 ReadM SNP 0004.scaffold00019 684852 1 G A - ScafM SNP 0004.scaffold00019 684920 2 AA GG scaffold3996 ReadM SNP 0004.scaffold00019 685050 1 A T - ReadM SNP 0004.scaffold00019 685297 1 G A - ReadM INDEL 0004.scaffold00019 685305 1 A . - ReadM SNP 0004.scaffold00019 685317 1 T C - ReadM SNP 0004.scaffold00019 685341 1 T G - ReadM SNP 0004.scaffold00019 685384 1 A T - ReadM SNP 0004.scaffold00019 685426 1 C A - ReadM SNP 0004.scaffold00019 685463 1 G C - ReadM SNP 0004.scaffold00019 685466 1 T C - ReadM SNP 0004.scaffold00019 685552 1 T G - ReadM SNP 0004.scaffold00019 685617 1 A G - ReadM SNP 0004.scaffold00019 685624 1 T C - ReadM SNP 0004.scaffold00019 685831 1 A C - ReadM SNP 0004.scaffold00019 686046 1 C T - ReadM SNP 0004.scaffold00019 686089 1 G A - ReadM SNP 0004.scaffold00019 686314 1 G C - ReadM SNP 0004.scaffold00019 686339 1 G A - ReadM SNP 0004.scaffold00019 686450 1 G A - ReadM SNP 0004.scaffold00019 686520 1 T C - ReadM SNP 0004.scaffold00019 686545 1 G C - ReadM SNP 0004.scaffold00019 686610 1 C T - ReadM SNP 0004.scaffold00019 686666 1 A G - ReadM SNP 0004.scaffold00019 686776 1 C A - ReadM SNP 0004.scaffold00019 686794 1 T G - ReadM SNP 0004.scaffold00019 687032 1 C T - ReadM SNP 0004.scaffold00019 687106 1 G A - ReadM SNP 0004.scaffold00019 687236 1 A G - ReadM SNP 0004.scaffold00019 687254 1 G A - ReadM SNP 0004.scaffold00019 687263 1 A T - ReadM SNP 0004.scaffold00019 687306 1 C G - ReadM SNP 0004.scaffold00019 687353 1 G A - ReadM SNP 0004.scaffold00019 687422 1 T G - ReadM SNP 0004.scaffold00019 687452 1 C A - ReadM SNP 0004.scaffold00019 687573 1 C T - ReadM SNP 0004.scaffold00019 687599 1 A G - ReadM SNP 0004.scaffold00019 687710 1 C T - ReadM SNP 0004.scaffold00019 687888 1 A G - ReadM SNP 0004.scaffold00019 687928 1 T G - ReadM SNP 0004.scaffold00019 687987 1 T C - ReadM SNP 0004.scaffold00019 688048 1 G A - ReadM SNP 0004.scaffold00019 688153 1 T C - ReadM SNP 0004.scaffold00019 688320 1 A G - ReadM SNP 0004.scaffold00019 688338 1 G T - ReadM SNP 0004.scaffold00019 688376 1 C T - ReadM SNP 0004.scaffold00019 688399 1 A T - ReadM SNP 0004.scaffold00019 688732 1 A G - ReadM SNP 0004.scaffold00019 688805 1 T A - ScafM SNP 0004.scaffold00019 688912 1 G C scaffold3996 ScafM SNP 0004.scaffold00019 689016 1 A G scaffold3996 ScafM SNP 0004.scaffold00019 689035 1 C T scaffold3996 ScafM SNP 0004.scaffold00019 689177 1 G C scaffold3996 Both SNP 0004.scaffold00019 689460 1 T C scaffold3996 Both SNP 0004.scaffold00019 689502 1 G A scaffold3996 ReadM SNP 0004.scaffold00019 689754 1 A G - ReadM SNP 0004.scaffold00019 689813 1 G A - ReadM SNP 0004.scaffold00019 689873 1 A G - ReadM SNP 0004.scaffold00019 690062 1 T C - ReadM SNP 0004.scaffold00019 690107 1 C A - Both SNP 0004.scaffold00019 690238 1 T G scaffold10479 Both SNP 0004.scaffold00019 690340 1 T C scaffold10479 Both SNP 0004.scaffold00019 690382 1 A G scaffold10479 Both SNP 0004.scaffold00019 690394 1 A G scaffold10479 Both SNP 0004.scaffold00019 690426 1 T C scaffold10479 ScafM SNP 0004.scaffold00019 690452 1 G C scaffold10479 ScafM SNP 0004.scaffold00019 690578 1 T C scaffold10479 ScafM SNP 0004.scaffold00019 690582 1 A G scaffold10479 ScafM SNP 0004.scaffold00019 690585 1 A G scaffold10479 ScafM SNP 0004.scaffold00019 690589 1 G A scaffold10479 Both SNP 0004.scaffold00019 690665 1 G C scaffold10479 Both SNP 0004.scaffold00019 690757 1 G A scaffold10479 Both SNP 0004.scaffold00019 690829 1 T C scaffold10479 Both SNP 0004.scaffold00019 691064 1 A C scaffold10479 Both SNP 0004.scaffold00019 691105 1 T A scaffold10479 Both SNP 0004.scaffold00019 691149 1 C T scaffold10479 Both SNP 0004.scaffold00019 691211 1 C G scaffold10479 ScafM SNP 0004.scaffold00019 691217 1 G A scaffold10479 ScafM SNP 0004.scaffold00019 691236 1 C T scaffold10479 ScafM SNP 0004.scaffold00019 691238 1 G A scaffold10479 Both SNP 0004.scaffold00019 691295 1 A G scaffold10479 Both SNP 0004.scaffold00019 691347 1 T A scaffold10479 ScafM SNP 0004.scaffold00019 691396 1 C G scaffold10479 ScafM SNP 0004.scaffold00019 691416 1 G A scaffold10479 ScafM SNP 0004.scaffold00019 691431 1 G C scaffold10479 ScafM SNP 0004.scaffold00019 691447 1 C T scaffold10479 ScafM SNP 0004.scaffold00019 691484 1 G A scaffold10479 ScafM SNP 0004.scaffold00019 691489 1 C T scaffold10479 ScafM INDEL 0004.scaffold00019 691491 3 TGT ... scaffold10479 ScafM SNP 0004.scaffold00019 691519 1 G T scaffold10479 Both SNP 0004.scaffold00019 691611 1 T C scaffold10479 ScafM SNP 0004.scaffold00019 691643 1 G A scaffold10479 ScafM INDEL 0004.scaffold00019 691725 8 ATGTCTGA ........ scaffold10479 ScafM SNP 0004.scaffold00019 691790 1 G T scaffold10479 ScafM SNP 0004.scaffold00019 691793 1 C T scaffold10479 ScafM SNP 0004.scaffold00019 691822 1 T A scaffold10479 ScafM SNP 0004.scaffold00019 691849 1 C G scaffold10479 ScafM SNP 0004.scaffold00019 691975 1 C A scaffold10479 ScafM SNP 0004.scaffold00019 691994 1 A G scaffold10479 ScafM SNP 0004.scaffold00019 692048 1 C A scaffold18650 ScafM SNP 0004.scaffold00019 692084 1 C G scaffold18650 ScafM SNP 0004.scaffold00019 692118 1 G C scaffold18650 ScafM INDEL 0004.scaffold00019 692141 4 .... ATCA scaffold18650 ScafM INDEL 0004.scaffold00019 692142 5 ..... CAACA scaffold18650 ScafM INDEL 0004.scaffold00019 692144 3 ... ATT scaffold18650 ScafM INDEL 0004.scaffold00019 692150 3 ... ATG scaffold18650 ScafM SNP 0004.scaffold00019 692229 1 C T scaffold18650 ScafM SNP 0004.scaffold00019 692259 1 G C scaffold18650 ScafM SNP 0004.scaffold00019 692297 1 T C scaffold18650 ScafM SNP 0004.scaffold00019 692302 1 T C scaffold18650 ScafM INDEL 0004.scaffold00019 692375 1 . A scaffold18650 ScafM SNP 0004.scaffold00019 692384 1 C A scaffold18650 ScafM SNP 0004.scaffold00019 692391 1 C T scaffold18650 ScafM SNP 0004.scaffold00019 692404 1 T G scaffold18650 ScafM INDEL 0004.scaffold00019 692439 4 ATAT .... scaffold18650 ScafM SNP 0004.scaffold00019 692464 1 C A scaffold18650 ReadM SNP 0004.scaffold00019 692535 1 C G - ReadM SNP 0004.scaffold00019 692662 1 C G - ReadM SNP 0004.scaffold00019 692689 1 A G - ReadM SNP 0004.scaffold00019 692923 1 G A - ReadM SNP 0004.scaffold00019 693114 1 G A - ReadM SNP 0004.scaffold00019 693120 1 T C - ReadM SNP 0004.scaffold00019 693202 1 A G - ReadM SNP 0004.scaffold00019 693234 1 A G - ReadM SNP 0004.scaffold00019 693281 1 T C - ReadM SNP 0004.scaffold00019 693415 1 C G - ReadM SNP 0004.scaffold00019 693423 1 C A - ReadM INDEL 0004.scaffold00019 693695 1 A . - ReadM SNP 0004.scaffold00019 694230 1 A T - ReadM SNP 0004.scaffold00019 694654 1 C A - ReadM SNP 0004.scaffold00019 694667 1 A G - ReadM SNP 0004.scaffold00019 694749 1 C T - ReadM SNP 0004.scaffold00019 694848 1 C G - ReadM SNP 0004.scaffold00019 694886 1 T G - ReadM SNP 0004.scaffold00019 694923 1 C T - ReadM SNP 0004.scaffold00019 694932 1 T C - ReadM SNP 0004.scaffold00019 695296 1 A G - ReadM SNP 0004.scaffold00019 695329 1 G C - ReadM SNP 0004.scaffold00019 695344 1 T C - ReadM SNP 0004.scaffold00019 695397 1 T C - ReadM SNP 0004.scaffold00019 695460 1 G A - ReadM SNP 0004.scaffold00019 696456 1 G A - Both SNP 0004.scaffold00019 696629 1 G A scaffold10479 ScafM SNP 0004.scaffold00019 696945 1 G A scaffold10479 ScafM SNP 0004.scaffold00019 696970 2 AA GG scaffold10479 ScafM SNP 0004.scaffold00019 696985 1 A G scaffold10479 Both SNP 0004.scaffold00019 697051 1 G C scaffold10479 ScafM INDEL 0004.scaffold00019 697245 2 .. AA scaffold10479 ReadM INDEL 0004.scaffold00019 697368 1 . C - ReadM SNP 0004.scaffold00019 697402 1 G C - ReadM SNP 0004.scaffold00019 697554 1 T G - ReadM SNP 0004.scaffold00019 698789 1 T G - ReadM SNP 0004.scaffold00019 698959 1 A G - ReadM SNP 0004.scaffold00019 698971 1 G T - ReadM SNP 0004.scaffold00019 699867 1 T C - ScafM SNP 0004.scaffold00019 700018 1 A G scaffold10479 Both SNP 0004.scaffold00019 700171 1 A G scaffold10479 Both SNP 0004.scaffold00019 700371 1 A G scaffold10479 Both SNP 0004.scaffold00019 700746 1 A T scaffold10479 ScafM SNP 0004.scaffold00019 700853 1 A G scaffold10479 Both SNP 0004.scaffold00019 700924 1 T C scaffold10479 Both SNP 0004.scaffold00019 701000 1 T A scaffold10479 ScafM INDEL 0004.scaffold00019 701022 3 ... CGG scaffold10479 ScafM SNP 0004.scaffold00019 701250 1 C T scaffold10479 ScafM SNP 0004.scaffold00019 701294 1 T A scaffold10479 ScafM SNP 0004.scaffold00019 701593 1 T A scaffold38465 ScafM SNP 0004.scaffold00019 701614 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 701631 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 701637 2 GA AT scaffold38465 ScafM SNP 0004.scaffold00019 701645 1 G C scaffold38465 ScafM SNP 0004.scaffold00019 701647 3 TGA CAT scaffold38465 ScafM SNP 0004.scaffold00019 701652 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 701667 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 701673 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 701704 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 701715 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 701738 1 T G scaffold38465 ScafM SNP 0004.scaffold00019 701753 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 701760 1 G T scaffold38465 ScafM INDEL 0004.scaffold00019 701779 2 AC .G scaffold38465 ScafM SNP 0004.scaffold00019 701803 1 G T scaffold38465 Both SNP 0004.scaffold00019 701832 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 701846 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 701856 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 701858 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 701860 1 C T scaffold38465 ScafM INDEL 0004.scaffold00019 701869 2 TC .. scaffold38465 ScafM SNP 0004.scaffold00019 701882 1 T G scaffold38465 ScafM SNP 0004.scaffold00019 701888 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 701920 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 701924 1 G A scaffold38465 ScafM INDEL 0004.scaffold00019 701951 10 TGAATATAAA .......... scaffold38465 ScafM INDEL 0004.scaffold00019 701962 1 A . scaffold38465 ScafM SNP 0004.scaffold00019 701988 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 701995 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 701998 1 T G scaffold38465 ScafM SNP 0004.scaffold00019 702014 1 G T scaffold38465 ScafM SNP 0004.scaffold00019 702031 1 G T scaffold38465 ScafM SNP 0004.scaffold00019 702036 1 C T scaffold38465 Both SNP 0004.scaffold00019 702039 1 A C scaffold38465 ScafM SNP 0004.scaffold00019 702088 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 702116 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 702131 1 A T scaffold38465 ScafM INDEL 0004.scaffold00019 702209 1 . G scaffold38465 ScafM SNP 0004.scaffold00019 702239 1 G C scaffold38465 ScafM INDEL 0004.scaffold00019 702289 3 ... AAG scaffold38465 ScafM SNP 0004.scaffold00019 702303 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 702305 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 702342 1 T A scaffold38465 ScafM SNP 0004.scaffold00019 702357 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 702394 1 G A scaffold38465 Both SNP 0004.scaffold00019 702439 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 702458 1 G C scaffold38465 ScafM SNP 0004.scaffold00019 702486 1 A T scaffold38465 Both SNP 0004.scaffold00019 702519 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 702527 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 702529 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 702537 3 AAA CTT scaffold38465 ScafM SNP 0004.scaffold00019 702543 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 702551 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 702572 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 702580 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 702599 2 TA CG scaffold38465 ScafM SNP 0004.scaffold00019 702607 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 702618 1 T A scaffold38465 ScafM SNP 0004.scaffold00019 702620 1 G T scaffold38465 ScafM SNP 0004.scaffold00019 702648 1 T A scaffold38465 ScafM SNP 0004.scaffold00019 702653 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 702681 1 T C scaffold38465 ScafM INDEL 0004.scaffold00019 702691 3 ... AAA scaffold38465 ScafM SNP 0004.scaffold00019 702701 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 702759 1 T A scaffold38465 ScafM SNP 0004.scaffold00019 702769 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 702843 1 A C scaffold38465 Both SNP 0004.scaffold00019 702848 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 702864 1 A C scaffold38465 ScafM SNP 0004.scaffold00019 702893 1 G T scaffold38465 ScafM SNP 0004.scaffold00019 702907 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 702935 1 G A scaffold38465 ScafM INDEL 0004.scaffold00019 702961 1 A . scaffold38465 ScafM SNP 0004.scaffold00019 702989 1 C G scaffold38465 ScafM INDEL 0004.scaffold00019 703004 2 AT .. scaffold38465 ScafM INDEL 0004.scaffold00019 703038 6 ...... TGTGCC scaffold38465 ScafM INDEL 0004.scaffold00019 703041 6 ...... GAAACA scaffold38465 ScafM SNP 0004.scaffold00019 703046 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 703087 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 703094 1 A T scaffold38465 ReadM INDEL 0004.scaffold00019 703104 1 A . - ScafM INDEL 0004.scaffold00019 703104 4 AAAA ..TT scaffold38465 ScafM SNP 0004.scaffold00019 703114 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 703141 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 703169 1 T A scaffold38465 Both SNP 0004.scaffold00019 703181 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 703189 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 703195 1 C G scaffold38465 ScafM SNP 0004.scaffold00019 703201 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 703204 1 C T scaffold38465 Both SNP 0004.scaffold00019 703235 1 A G scaffold38465 ScafM SNP 0004.scaffold00019 703240 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 703250 2 GC CT scaffold38465 ScafM SNP 0004.scaffold00019 703304 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 703342 1 C A scaffold38465 ScafM SNP 0004.scaffold00019 703347 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 703368 1 C G scaffold38465 ScafM SNP 0004.scaffold00019 703376 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 703392 1 T G scaffold38465 ScafM SNP 0004.scaffold00019 703416 1 A C scaffold38465 ReadM SNP 0004.scaffold00019 703432 1 T C - ScafM SNP 0004.scaffold00019 703432 2 TA CT scaffold38465 ScafM SNP 0004.scaffold00019 703476 1 G A scaffold38465 ScafM SNP 0004.scaffold00019 703479 1 T A scaffold38465 Both SNP 0004.scaffold00019 703511 1 C T scaffold38465 ScafM SNP 0004.scaffold00019 703540 1 T C scaffold38465 ScafM SNP 0004.scaffold00019 703591 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 703594 2 TT CA scaffold38465 ScafM SNP 0004.scaffold00019 703599 1 C T scaffold38465 ScafM INDEL 0004.scaffold00019 703612 1 A . scaffold38465 ScafM SNP 0004.scaffold00019 703620 1 A C scaffold38465 ScafM SNP 0004.scaffold00019 703624 1 A T scaffold38465 ScafM SNP 0004.scaffold00019 703665 1 C T scaffold4923 ScafM SNP 0004.scaffold00019 703694 1 T A scaffold4923 ScafM SNP 0004.scaffold00019 703709 1 C T scaffold4923 ScafM SNP 0004.scaffold00019 703729 1 A C scaffold4923 ReadM SNP 0004.scaffold00019 703871 1 A G - ReadM SNP 0004.scaffold00019 704185 1 G A - ReadM INDEL 0004.scaffold00019 704287 1 . A - ScafM INDEL 0004.scaffold00019 704418 3 AGA ... scaffold4923 ScafM INDEL 0004.scaffold00019 704423 1 A . scaffold4923 Both SNP 0004.scaffold00019 704468 1 A G scaffold4923 ScafM SNP 0004.scaffold00019 704502 1 T G scaffold4923 ScafM SNP 0004.scaffold00019 704521 1 T A scaffold4923 ScafM INDEL 0004.scaffold00019 704530 1 . T scaffold4923 ReadM SNP 0004.scaffold00019 704536 1 T G - ScafM SNP 0004.scaffold00019 704536 2 TT GG scaffold4923 ReadM SNP 0004.scaffold00019 704548 1 C T - ScafM SNP 0004.scaffold00019 704571 1 A G scaffold4923 ScafM SNP 0004.scaffold00019 704574 1 A G scaffold4923 ReadM SNP 0004.scaffold00019 705235 1 C G - ScafM SNP 0004.scaffold00019 706461 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 706493 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 706564 1 C T scaffold27233 ReadM SNP 0004.scaffold00019 707359 1 A G - ReadM SNP 0004.scaffold00019 707394 1 T A - ReadM INDEL 0004.scaffold00019 707554 2 TT .. - ReadM SNP 0004.scaffold00019 707702 1 T C - ReadM SNP 0004.scaffold00019 707768 1 T C - ReadM SNP 0004.scaffold00019 707940 1 T C - ReadM INDEL 0004.scaffold00019 708094 1 . T - ReadM SNP 0004.scaffold00019 708255 1 C T - ReadM SNP 0004.scaffold00019 708424 1 T C - ReadM SNP 0004.scaffold00019 708471 1 T A - ReadM SNP 0004.scaffold00019 708533 1 A G - ReadM SNP 0004.scaffold00019 708545 1 T C - ReadM SNP 0004.scaffold00019 708566 1 A G - ReadM SNP 0004.scaffold00019 708658 1 G A - ReadM SNP 0004.scaffold00019 708668 1 C T - Both SNP 0004.scaffold00019 708805 1 C T scaffold27233 Both SNP 0004.scaffold00019 708908 1 C T scaffold27233 Both INDEL 0004.scaffold00019 709383 2 .. GT scaffold27233 Both SNP 0004.scaffold00019 709531 1 A G scaffold27233 Both SNP 0004.scaffold00019 709584 1 T C scaffold27233 Both SNP 0004.scaffold00019 709672 1 C T scaffold27233 Both SNP 0004.scaffold00019 709928 1 G T scaffold27233 ReadM SNP 0004.scaffold00019 710018 1 G A - ScafM SNP 0004.scaffold00019 710104 1 C T scaffold27233 Both SNP 0004.scaffold00019 710246 1 G A scaffold27233 Both SNP 0004.scaffold00019 710371 1 G T scaffold27233 Both SNP 0004.scaffold00019 710423 1 T G scaffold27233 Both SNP 0004.scaffold00019 710479 1 C G scaffold27233 Both SNP 0004.scaffold00019 710594 1 A C scaffold27233 Both SNP 0004.scaffold00019 710636 1 C A scaffold27233 Both SNP 0004.scaffold00019 711140 1 G A scaffold27233 Both SNP 0004.scaffold00019 711147 1 C G scaffold27233 Both SNP 0004.scaffold00019 711215 1 A C scaffold27233 Both SNP 0004.scaffold00019 711451 1 A G scaffold27233 Both SNP 0004.scaffold00019 711488 1 T C scaffold27233 Both INDEL 0004.scaffold00019 711552 1 G . scaffold27233 ReadM SNP 0004.scaffold00019 711620 1 A C - ReadM SNP 0004.scaffold00019 711688 1 G A - ReadM SNP 0004.scaffold00019 711691 1 A G - ReadM SNP 0004.scaffold00019 711734 1 C T - ReadM SNP 0004.scaffold00019 711743 1 T C - ReadM SNP 0004.scaffold00019 711835 1 T A - ReadM SNP 0004.scaffold00019 711915 1 T C - ReadM SNP 0004.scaffold00019 711919 1 A G - ReadM SNP 0004.scaffold00019 712259 1 G T - ReadM SNP 0004.scaffold00019 712326 1 T C - ReadM SNP 0004.scaffold00019 712952 1 A C - ReadM SNP 0004.scaffold00019 713082 1 A T - ReadM SNP 0004.scaffold00019 713328 1 A G - ReadM SNP 0004.scaffold00019 713404 1 C A - ReadM SNP 0004.scaffold00019 713442 1 G T - ReadM SNP 0004.scaffold00019 713523 1 T C - ReadM SNP 0004.scaffold00019 713694 1 T C - ReadM SNP 0004.scaffold00019 713763 1 G T - ScafM INDEL 0004.scaffold00019 714154 1 . T scaffold27233 Both SNP 0004.scaffold00019 714205 1 G T scaffold27233 ScafM INDEL 0004.scaffold00019 714342 4 .... TATC scaffold27233 ScafM SNP 0004.scaffold00019 714859 1 A G scaffold27233 Both INDEL 0004.scaffold00019 714901 1 . G scaffold27233 Both SNP 0004.scaffold00019 714918 1 T C scaffold27233 ReadM SNP 0004.scaffold00019 714988 1 G A - ReadM SNP 0004.scaffold00019 715091 1 A G - ReadM SNP 0004.scaffold00019 715205 1 C T - ReadM SNP 0004.scaffold00019 715263 1 G A - ReadM SNP 0004.scaffold00019 715319 1 A G - ReadM SNP 0004.scaffold00019 715397 1 T A - ReadM SNP 0004.scaffold00019 715502 1 G T - ReadM SNP 0004.scaffold00019 715580 1 G T - ReadM SNP 0004.scaffold00019 715605 1 A C - ReadM INDEL 0004.scaffold00019 715711 1 . A - ReadM INDEL 0004.scaffold00019 715877 1 A . - ReadM SNP 0004.scaffold00019 715961 1 T A - ReadM INDEL 0004.scaffold00019 716173 1 C . - ReadM SNP 0004.scaffold00019 716286 1 T C - ReadM SNP 0004.scaffold00019 716925 1 T G - ReadM SNP 0004.scaffold00019 717157 1 T C - ReadM SNP 0004.scaffold00019 717326 1 T G - ReadM SNP 0004.scaffold00019 717534 1 G A - ReadM SNP 0004.scaffold00019 717597 1 A G - ReadM INDEL 0004.scaffold00019 717682 1 . G - ReadM SNP 0004.scaffold00019 717716 1 T C - ReadM SNP 0004.scaffold00019 717740 1 G A - ReadM SNP 0004.scaffold00019 718098 1 C T - ReadM SNP 0004.scaffold00019 718103 1 A G - ReadM SNP 0004.scaffold00019 718139 1 C T - ReadM SNP 0004.scaffold00019 718185 1 A G - ReadM SNP 0004.scaffold00019 718299 1 G A - ReadM SNP 0004.scaffold00019 718437 1 C A - ReadM INDEL 0004.scaffold00019 718573 1 G . - ReadM SNP 0004.scaffold00019 718593 1 G C - ReadM SNP 0004.scaffold00019 718604 1 T C - ReadM SNP 0004.scaffold00019 718662 1 G T - ReadM SNP 0004.scaffold00019 718674 1 A G - ReadM INDEL 0004.scaffold00019 718919 1 A . - ReadM SNP 0004.scaffold00019 718934 1 T C - ReadM SNP 0004.scaffold00019 719096 1 C T - ReadM SNP 0004.scaffold00019 719260 1 T G - ReadM SNP 0004.scaffold00019 719368 1 G A - ReadM SNP 0004.scaffold00019 719609 1 G T - ReadM SNP 0004.scaffold00019 719611 1 G A - ReadM SNP 0004.scaffold00019 719754 1 A G - ReadM SNP 0004.scaffold00019 719969 1 A G - ReadM SNP 0004.scaffold00019 720292 1 A C - ReadM SNP 0004.scaffold00019 720319 1 T C - ReadM SNP 0004.scaffold00019 720358 1 C T - ReadM SNP 0004.scaffold00019 720625 1 G C - ScafM SNP 0004.scaffold00019 720796 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 720836 1 A T scaffold27233 Both SNP 0004.scaffold00019 721119 1 G T scaffold27233 Both SNP 0004.scaffold00019 721438 1 A G scaffold27233 Both SNP 0004.scaffold00019 721466 1 A C scaffold27233 Both SNP 0004.scaffold00019 721483 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 721547 3 ... CAC scaffold27233 Both SNP 0004.scaffold00019 721566 1 G C scaffold27233 Both SNP 0004.scaffold00019 721642 1 C A scaffold27233 ScafM SNP 0004.scaffold00019 721831 1 T A scaffold27233 ScafM INDEL 0004.scaffold00019 721860 2 .. TA scaffold27233 ScafM SNP 0004.scaffold00019 721899 1 G C scaffold27233 ScafM SNP 0004.scaffold00019 721946 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 721954 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 721998 1 C A scaffold27233 ScafM SNP 0004.scaffold00019 722116 1 C T scaffold27233 ScafM INDEL 0004.scaffold00019 722400 23 ....................... AAAGTTAGAATGTCAAATTGGTG scaffold27233 ScafM INDEL 0004.scaffold00019 722403 2 .. GA scaffold27233 ReadM SNP 0004.scaffold00019 722723 1 A G - Both SNP 0004.scaffold00019 722743 1 G A scaffold27233 Both SNP 0004.scaffold00019 722869 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 722907 1 . C scaffold27233 ScafM SNP 0004.scaffold00019 722909 1 T A scaffold27233 ReadM SNP 0004.scaffold00019 723251 1 T C - ScafM INDEL 0004.scaffold00019 723384 1 T . scaffold27233 ScafM SNP 0004.scaffold00019 723388 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 723398 1 G A scaffold27233 ScafM INDEL 0004.scaffold00019 723404 3 ... TAC scaffold27233 ScafM SNP 0004.scaffold00019 723465 1 A G scaffold27233 Both SNP 0004.scaffold00019 723489 1 A G scaffold27233 Both SNP 0004.scaffold00019 723495 1 T A scaffold27233 ScafM SNP 0004.scaffold00019 723557 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 723809 1 G A scaffold27233 Both SNP 0004.scaffold00019 723849 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 724888 1 G C scaffold27233 ScafM INDEL 0004.scaffold00019 724894 1 . G scaffold27233 ScafM SNP 0004.scaffold00019 724920 1 G C scaffold27233 ScafM INDEL 0004.scaffold00019 724955 1 . C scaffold27233 ScafM SNP 0004.scaffold00019 724969 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 724985 2 TC CT scaffold27233 ScafM SNP 0004.scaffold00019 724998 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 725005 1 C A scaffold27233 ScafM INDEL 0004.scaffold00019 725021 13 ............. ATGGAGGTGCTTG scaffold27233 ScafM INDEL 0004.scaffold00019 725022 3 ... GAA scaffold27233 ScafM SNP 0004.scaffold00019 725045 1 C T scaffold27233 ScafM INDEL 0004.scaffold00019 725055 1 . A scaffold27233 ScafM SNP 0004.scaffold00019 725084 1 A T scaffold27233 ScafM SNP 0004.scaffold00019 725380 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 725426 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 725428 1 T G scaffold27233 Both SNP 0004.scaffold00019 725445 1 C T scaffold27233 Both SNP 0004.scaffold00019 725518 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 725547 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 725564 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 725576 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 725581 1 T A scaffold27233 ScafM SNP 0004.scaffold00019 725597 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 725639 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 725649 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 725683 4 TGGT .... scaffold27233 ScafM SNP 0004.scaffold00019 725726 1 G A scaffold27233 ScafM INDEL 0004.scaffold00019 725758 1 A . scaffold27233 ScafM SNP 0004.scaffold00019 725818 1 G C scaffold27233 ScafM SNP 0004.scaffold00019 725846 1 A T scaffold27233 ScafM SNP 0004.scaffold00019 725852 1 A C scaffold27233 ScafM SNP 0004.scaffold00019 725868 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 726334 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 726340 3 AAG ... scaffold27233 ScafM SNP 0004.scaffold00019 726364 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 726378 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 726414 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 726419 1 A C scaffold27233 ScafM SNP 0004.scaffold00019 726422 1 G T scaffold27233 ScafM SNP 0004.scaffold00019 726451 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 726478 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 726496 1 C A scaffold27233 ScafM SNP 0004.scaffold00019 726574 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 726580 1 T G scaffold27233 ScafM SNP 0004.scaffold00019 726679 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 726695 1 G T scaffold27233 ScafM SNP 0004.scaffold00019 726706 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 726710 1 C G scaffold27233 ScafM INDEL 0004.scaffold00019 726768 8 ........ AACTATAC scaffold27233 ScafM SNP 0004.scaffold00019 726789 1 T C scaffold27233 ScafM INDEL 0004.scaffold00019 726824 1 . T scaffold27233 ScafM SNP 0004.scaffold00019 726832 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 726856 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 726886 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 726897 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 726907 1 A G scaffold27233 ScafM SNP 0004.scaffold00019 726922 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 726973 1 A C scaffold27233 ScafM SNP 0004.scaffold00019 726995 3 ACT GAA scaffold27233 ScafM SNP 0004.scaffold00019 727133 1 T A scaffold27233 ScafM SNP 0004.scaffold00019 727161 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 727175 1 T A scaffold27233 ReadM SNP 0004.scaffold00019 727367 1 T A - ReadM SNP 0004.scaffold00019 727372 1 G A - Both SNP 0004.scaffold00019 727490 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 727495 1 A C scaffold27233 ScafM INDEL 0004.scaffold00019 727571 6 ...... ACAATG scaffold27233 ScafM SNP 0004.scaffold00019 727611 3 TTT AAA scaffold27233 ScafM SNP 0004.scaffold00019 727981 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 728800 1 C A scaffold27233 ScafM SNP 0004.scaffold00019 728837 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 728905 2 CG AA scaffold27233 ScafM INDEL 0004.scaffold00019 728908 1 . T scaffold27233 ScafM SNP 0004.scaffold00019 728917 1 T A scaffold27233 ScafM SNP 0004.scaffold00019 728920 1 A T scaffold27233 ScafM INDEL 0004.scaffold00019 728924 2 GA .C scaffold27233 ScafM SNP 0004.scaffold00019 728940 2 CT AA scaffold27233 ScafM SNP 0004.scaffold00019 729341 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 729400 1 C T scaffold27233 ScafM SNP 0004.scaffold00019 729410 2 TA CC scaffold27233 ScafM SNP 0004.scaffold00019 729414 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 729642 1 T C scaffold27233 Both SNP 0004.scaffold00019 729902 1 G C scaffold27233 ScafM SNP 0004.scaffold00019 729946 1 C A scaffold27233 ScafM SNP 0004.scaffold00019 729972 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 729977 1 T C scaffold27233 ScafM SNP 0004.scaffold00019 729989 1 A C scaffold27233 ScafM SNP 0004.scaffold00019 729995 1 C T scaffold27233 ReadM SNP 0004.scaffold00019 733209 1 T C - ReadM SNP 0004.scaffold00019 733213 1 A G - ReadM SNP 0004.scaffold00019 733884 2 AC GT - ScafM SNP 0004.scaffold00019 733972 1 G A scaffold27233 ScafM SNP 0004.scaffold00019 733975 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 733982 1 G . scaffold27233 ScafM SNP 0004.scaffold00019 733989 1 T A scaffold27233 Both SNP 0004.scaffold00019 734000 1 G A scaffold27233 Both SNP 0004.scaffold00019 734114 1 A G scaffold27233 ScafM INDEL 0004.scaffold00019 734126 12 CTAGAAAATGTA ............ scaffold27233 ScafM SNP 0004.scaffold00019 734157 1 C G scaffold27233 ScafM SNP 0004.scaffold00019 734174 1 T C scaffold27233 ScafM INDEL 0004.scaffold00019 734220 3 ... TTT scaffold27233 ReadM INDEL 0004.scaffold00019 734332 1 . A - ReadM SNP 0004.scaffold00019 734357 1 C T - ReadM SNP 0004.scaffold00019 734439 1 T C - ReadM SNP 0004.scaffold00019 734460 1 G A - ReadM SNP 0004.scaffold00019 734530 1 T C - ReadM SNP 0004.scaffold00019 734564 1 A G - ReadM SNP 0004.scaffold00019 734656 1 G T - ReadM SNP 0004.scaffold00019 734986 1 A T - ReadM SNP 0004.scaffold00019 734995 1 C T - ReadM SNP 0004.scaffold00019 735004 1 T C - ScafM SNP 0004.scaffold00019 742355 1 C T scaffold3442 ReadM SNP 0004.scaffold00019 745727 1 C T - ScafM SNP 0004.scaffold00019 748923 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 748965 1 C T scaffold9343 ReadM SNP 0004.scaffold00019 749361 1 T C - ReadM SNP 0004.scaffold00019 749396 1 T A - ReadM SNP 0004.scaffold00019 749456 1 C T - ReadM SNP 0004.scaffold00019 749467 1 C T - ReadM SNP 0004.scaffold00019 749530 1 T C - ScafM SNP 0004.scaffold00019 749610 1 T A scaffold9343 ScafM INDEL 0004.scaffold00019 749617 1 A . scaffold9343 ScafM SNP 0004.scaffold00019 749621 1 T C scaffold9343 ScafM INDEL 0004.scaffold00019 749789 14 .............. CAACCCCCCCCCCC scaffold9343 ScafM INDEL 0004.scaffold00019 749792 1 . A scaffold9343 ScafM SNP 0004.scaffold00019 749811 1 C T scaffold9343 ScafM INDEL 0004.scaffold00019 749842 3 ... GAG scaffold9343 Both SNP 0004.scaffold00019 749898 1 A G scaffold9343 Both SNP 0004.scaffold00019 750034 1 T C scaffold9343 Both SNP 0004.scaffold00019 750055 1 A C scaffold9343 ReadM SNP 0004.scaffold00019 750100 1 A G - Both SNP 0004.scaffold00019 750184 1 A G scaffold9343 Both INDEL 0004.scaffold00019 750241 1 T . scaffold9343 Both SNP 0004.scaffold00019 750320 1 A T scaffold9343 Both SNP 0004.scaffold00019 750335 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 750395 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 750399 1 A C scaffold9343 ScafM INDEL 0004.scaffold00019 750430 1 G . scaffold9343 ScafM SNP 0004.scaffold00019 750479 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 750527 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 750529 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 750643 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 750694 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 750710 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 750782 1 T G scaffold9343 ReadM SNP 0004.scaffold00019 751332 1 C T - ReadM SNP 0004.scaffold00019 751480 1 C A - ReadM SNP 0004.scaffold00019 751570 1 T C - ReadM SNP 0004.scaffold00019 751690 1 A T - ReadM INDEL 0004.scaffold00019 751730 1 G . - ReadM SNP 0004.scaffold00019 752111 1 C A - ReadM INDEL 0004.scaffold00019 752112 1 . T - ReadM INDEL 0004.scaffold00019 752276 1 . C - ScafM INDEL 0004.scaffold00019 752443 1 . T scaffold9343 ScafM SNP 0004.scaffold00019 752822 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 752824 1 G A scaffold9343 ScafM INDEL 0004.scaffold00019 752826 3 CTT ... scaffold9343 ScafM SNP 0004.scaffold00019 752832 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 753010 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 753031 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 753072 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 753076 2 CG TA scaffold9343 ScafM SNP 0004.scaffold00019 753080 1 G C scaffold9343 Both SNP 0004.scaffold00019 753094 1 A T scaffold9343 Both SNP 0004.scaffold00019 753101 1 T A scaffold9343 Both SNP 0004.scaffold00019 753333 1 G C scaffold9343 Both SNP 0004.scaffold00019 753352 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 753366 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 753390 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 753414 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 753448 1 G C scaffold9343 ScafM SNP 0004.scaffold00019 753455 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 753477 1 A C scaffold9343 ScafM INDEL 0004.scaffold00019 753497 8 ........ ACTGTTGT scaffold9343 ScafM SNP 0004.scaffold00019 753531 1 G A scaffold9343 ScafM INDEL 0004.scaffold00019 753618 3 TAA .CT scaffold9343 ScafM SNP 0004.scaffold00019 753642 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 753648 1 T A scaffold9343 ScafM INDEL 0004.scaffold00019 753661 1 T . scaffold9343 ScafM SNP 0004.scaffold00019 753663 1 T A scaffold9343 ScafM INDEL 0004.scaffold00019 753687 1 C . scaffold9343 ScafM SNP 0004.scaffold00019 753695 1 C T scaffold9343 ScafM INDEL 0004.scaffold00019 753729 1 T . scaffold9343 ScafM SNP 0004.scaffold00019 753741 1 C G scaffold9343 ScafM SNP 0004.scaffold00019 753786 1 G C scaffold9343 ScafM SNP 0004.scaffold00019 753824 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 753850 1 G A scaffold9343 ScafM INDEL 0004.scaffold00019 753855 1 . G scaffold9343 ScafM SNP 0004.scaffold00019 753872 1 G A scaffold9343 ReadM SNP 0004.scaffold00019 760899 1 A G - ScafM SNP 0004.scaffold00019 762642 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 762674 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 762676 1 G T scaffold9343 ScafM SNP 0004.scaffold00019 762689 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 762731 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 762786 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 762836 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 762855 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 762861 1 G T scaffold9343 ScafM SNP 0004.scaffold00019 762877 1 G T scaffold9343 ScafM SNP 0004.scaffold00019 762908 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 763001 2 CA TT scaffold9343 ScafM SNP 0004.scaffold00019 763051 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 763123 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 763157 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 763172 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 763177 1 A T scaffold9343 ScafM INDEL 0004.scaffold00019 763226 1 . T scaffold9343 ScafM SNP 0004.scaffold00019 763277 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 763280 1 A G scaffold9343 ScafM INDEL 0004.scaffold00019 763287 5 TAATT ....C scaffold9343 ScafM SNP 0004.scaffold00019 763361 1 T A scaffold9343 ScafM INDEL 0004.scaffold00019 763496 9 TAATGCTTT ......... scaffold9343 ScafM INDEL 0004.scaffold00019 763506 1 T . scaffold9343 ScafM SNP 0004.scaffold00019 763514 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 763531 1 T C scaffold9343 Both SNP 0004.scaffold00019 763663 1 T C scaffold9343 Both SNP 0004.scaffold00019 763763 1 C G scaffold9343 Both SNP 0004.scaffold00019 763793 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 763819 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 763824 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 763837 1 T A scaffold9343 Both SNP 0004.scaffold00019 763863 1 G A scaffold9343 Both SNP 0004.scaffold00019 763884 1 C T scaffold9343 Both SNP 0004.scaffold00019 763906 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 763959 1 A G scaffold9343 ScafM INDEL 0004.scaffold00019 763961 4 .... CGCA scaffold9343 ScafM SNP 0004.scaffold00019 763974 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 763999 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 764003 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 764015 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 764033 1 A G scaffold9343 ReadM SNP 0004.scaffold00019 764093 1 G T - ReadM SNP 0004.scaffold00019 764157 1 G A - ReadM SNP 0004.scaffold00019 764179 1 A C - ReadM SNP 0004.scaffold00019 764464 1 G T - ReadM SNP 0004.scaffold00019 764472 1 C T - ReadM SNP 0004.scaffold00019 764492 1 G A - ReadM SNP 0004.scaffold00019 764555 1 T G - ReadM SNP 0004.scaffold00019 764576 1 G T - ReadM SNP 0004.scaffold00019 764578 1 G T - ReadM SNP 0004.scaffold00019 764680 1 C A - ReadM SNP 0004.scaffold00019 764753 1 A G - ReadM SNP 0004.scaffold00019 764810 1 A G - ReadM INDEL 0004.scaffold00019 764882 2 AA .. - ReadM INDEL 0004.scaffold00019 764948 1 T . - ReadM SNP 0004.scaffold00019 764972 1 C T - ReadM SNP 0004.scaffold00019 765018 1 T C - ReadM SNP 0004.scaffold00019 765079 1 T A - ReadM SNP 0004.scaffold00019 765081 1 T A - ReadM SNP 0004.scaffold00019 765104 1 G C - ReadM SNP 0004.scaffold00019 765194 1 G A - ReadM SNP 0004.scaffold00019 765302 1 G A - ReadM SNP 0004.scaffold00019 765345 1 A G - ReadM SNP 0004.scaffold00019 765364 1 G C - ReadM SNP 0004.scaffold00019 765387 1 G C - ReadM SNP 0004.scaffold00019 765425 1 A G - ReadM SNP 0004.scaffold00019 765550 1 A G - ReadM SNP 0004.scaffold00019 765555 1 C A - ReadM INDEL 0004.scaffold00019 765595 2 AA .. - ReadM SNP 0004.scaffold00019 765634 1 C G - ReadM SNP 0004.scaffold00019 766322 1 C A - ReadM SNP 0004.scaffold00019 766360 1 A G - ReadM SNP 0004.scaffold00019 766439 1 T A - ReadM SNP 0004.scaffold00019 766549 1 T A - ReadM SNP 0004.scaffold00019 766681 1 C A - ReadM SNP 0004.scaffold00019 766734 1 G T - ReadM SNP 0004.scaffold00019 766787 1 A T - ReadM SNP 0004.scaffold00019 767180 1 G T - Both SNP 0004.scaffold00019 767252 1 T C scaffold9343 Both SNP 0004.scaffold00019 767293 1 C T scaffold9343 Both SNP 0004.scaffold00019 767307 1 G A scaffold9343 Both SNP 0004.scaffold00019 767325 1 T C scaffold9343 ReadM SNP 0004.scaffold00019 767506 1 C T - Both SNP 0004.scaffold00019 767599 1 A T scaffold9343 ScafM SNP 0004.scaffold00019 767641 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 767649 1 G A scaffold9343 ScafM INDEL 0004.scaffold00019 767657 1 T . scaffold9343 ScafM SNP 0004.scaffold00019 767661 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 767675 1 T C scaffold9343 Both SNP 0004.scaffold00019 767696 1 G A scaffold9343 Both SNP 0004.scaffold00019 767702 1 T C scaffold9343 Both SNP 0004.scaffold00019 767805 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 767847 1 G T scaffold9343 Both SNP 0004.scaffold00019 767854 1 C T scaffold9343 Both SNP 0004.scaffold00019 767859 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 767926 1 A G scaffold9343 ScafM INDEL 0004.scaffold00019 767949 2 GT .. scaffold9343 ScafM INDEL 0004.scaffold00019 767956 2 AG .. scaffold9343 ScafM INDEL 0004.scaffold00019 767962 9 ACGGGGCAG ......... scaffold9343 ScafM INDEL 0004.scaffold00019 767974 6 AAGCGA ...... scaffold9343 ScafM SNP 0004.scaffold00019 768004 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 768006 1 G C scaffold9343 ScafM SNP 0004.scaffold00019 768015 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 768030 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 768042 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 768049 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 768113 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 768115 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 768204 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 768211 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 768215 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 768222 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 768224 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 768232 1 G A scaffold9343 ReadM SNP 0004.scaffold00019 768366 1 T C - ReadM SNP 0004.scaffold00019 768411 1 T G - ReadM SNP 0004.scaffold00019 768425 1 A G - ReadM SNP 0004.scaffold00019 768568 1 A G - Both SNP 0004.scaffold00019 768585 1 A C scaffold9343 Both SNP 0004.scaffold00019 768601 1 A G scaffold9343 ReadM SNP 0004.scaffold00019 768886 1 C T - Both SNP 0004.scaffold00019 769010 1 C G scaffold9343 Both SNP 0004.scaffold00019 769034 1 C A scaffold9343 Both SNP 0004.scaffold00019 769065 1 C T scaffold9343 Both SNP 0004.scaffold00019 769100 1 G C scaffold9343 Both SNP 0004.scaffold00019 769263 1 A G scaffold9343 Both SNP 0004.scaffold00019 769296 1 G T scaffold9343 Both SNP 0004.scaffold00019 769354 1 A G scaffold9343 Both SNP 0004.scaffold00019 769389 1 T A scaffold9343 Both SNP 0004.scaffold00019 769431 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 769511 2 TC CT scaffold9343 ScafM INDEL 0004.scaffold00019 769515 1 . G scaffold9343 ScafM SNP 0004.scaffold00019 769539 1 G T scaffold9343 Both INDEL 0004.scaffold00019 769661 1 . G scaffold9343 ScafM SNP 0004.scaffold00019 769663 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 769706 1 C T scaffold9343 ScafM INDEL 0004.scaffold00019 769721 2 .. GA scaffold9343 ScafM SNP 0004.scaffold00019 769734 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 769796 1 G T scaffold9343 ScafM INDEL 0004.scaffold00019 769831 1 A . scaffold9343 ReadM SNP 0004.scaffold00019 769879 1 A G - ReadM SNP 0004.scaffold00019 769899 1 T C - ScafM SNP 0004.scaffold00019 769977 1 C A scaffold9343 ScafM INDEL 0004.scaffold00019 769982 3 ... CTT scaffold9343 ReadM SNP 0004.scaffold00019 770153 1 A G - ScafM SNP 0004.scaffold00019 773578 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 773607 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 773622 2 AA CC scaffold9343 Both SNP 0004.scaffold00019 773681 1 A G scaffold9343 Both SNP 0004.scaffold00019 773689 1 A G scaffold9343 ReadM SNP 0004.scaffold00019 773871 1 A G - ReadM SNP 0004.scaffold00019 774039 1 A G - ReadM SNP 0004.scaffold00019 774363 1 T C - ReadM SNP 0004.scaffold00019 774594 1 T C - ScafM SNP 0004.scaffold00019 775131 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 775136 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 775250 2 CG TA scaffold9343 ScafM SNP 0004.scaffold00019 775259 1 G T scaffold9343 ScafM SNP 0004.scaffold00019 775291 1 C G scaffold9343 Both INDEL 0004.scaffold00019 775364 1 A . scaffold9343 Both SNP 0004.scaffold00019 775370 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 775457 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 775539 1 T G scaffold9343 ScafM INDEL 0004.scaffold00019 775546 1 A . scaffold9343 ScafM SNP 0004.scaffold00019 775559 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 775616 1 A G scaffold9343 ScafM INDEL 0004.scaffold00019 775622 2 .. CA scaffold9343 ScafM SNP 0004.scaffold00019 776340 2 TC AA scaffold24145 ScafM SNP 0004.scaffold00019 776343 1 G C scaffold24145 ScafM SNP 0004.scaffold00019 776353 2 AT CC scaffold24145 ScafM SNP 0004.scaffold00019 776363 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776386 1 A C scaffold24145 ScafM SNP 0004.scaffold00019 776390 1 G A scaffold24145 ScafM SNP 0004.scaffold00019 776412 1 G T scaffold24145 ScafM SNP 0004.scaffold00019 776414 1 G C scaffold24145 ScafM SNP 0004.scaffold00019 776423 2 CA AG scaffold24145 ScafM SNP 0004.scaffold00019 776428 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776478 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776496 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776503 1 A C scaffold24145 ScafM SNP 0004.scaffold00019 776543 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776561 1 C G scaffold24145 ScafM SNP 0004.scaffold00019 776578 3 TAA AGT scaffold24145 ScafM SNP 0004.scaffold00019 776584 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776587 2 TC CT scaffold24145 ScafM SNP 0004.scaffold00019 776711 1 G A scaffold24145 ScafM INDEL 0004.scaffold00019 776716 1 . T scaffold24145 ScafM SNP 0004.scaffold00019 776721 1 G A scaffold24145 ScafM SNP 0004.scaffold00019 776739 1 G C scaffold24145 ScafM SNP 0004.scaffold00019 776745 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776747 1 A G scaffold24145 ScafM INDEL 0004.scaffold00019 776753 5 ..... ACACA scaffold24145 ScafM INDEL 0004.scaffold00019 776760 1 . C scaffold24145 ScafM SNP 0004.scaffold00019 776775 1 C T scaffold24145 ScafM INDEL 0004.scaffold00019 776778 1 T . scaffold24145 ScafM SNP 0004.scaffold00019 776784 2 GC AA scaffold24145 ScafM INDEL 0004.scaffold00019 776789 2 AC .T scaffold24145 ScafM SNP 0004.scaffold00019 776793 3 ATT GAC scaffold24145 ScafM SNP 0004.scaffold00019 776816 1 A G scaffold24145 ScafM SNP 0004.scaffold00019 776833 1 A G scaffold24145 ScafM SNP 0004.scaffold00019 776837 1 G T scaffold24145 ScafM SNP 0004.scaffold00019 776853 1 A C scaffold24145 ScafM SNP 0004.scaffold00019 776861 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776869 1 G A scaffold24145 ScafM SNP 0004.scaffold00019 776876 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776909 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776916 1 G A scaffold24145 ScafM INDEL 0004.scaffold00019 776956 1 T . scaffold24145 ScafM SNP 0004.scaffold00019 776958 1 T A scaffold24145 ScafM SNP 0004.scaffold00019 776966 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776968 1 G C scaffold24145 ScafM SNP 0004.scaffold00019 776972 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776982 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 776997 1 C T scaffold24145 ScafM SNP 0004.scaffold00019 776999 1 A G scaffold24145 ScafM SNP 0004.scaffold00019 777045 1 A C scaffold24145 ScafM SNP 0004.scaffold00019 777071 2 TT AC scaffold24145 ScafM INDEL 0004.scaffold00019 777085 1 . A scaffold24145 ScafM SNP 0004.scaffold00019 777091 1 G A scaffold24145 ScafM INDEL 0004.scaffold00019 777102 4 .... CAAT scaffold24145 ScafM SNP 0004.scaffold00019 777120 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 777166 1 A G scaffold24145 ScafM INDEL 0004.scaffold00019 777182 1 . A scaffold24145 ScafM INDEL 0004.scaffold00019 777184 3 ... TTG scaffold24145 ScafM SNP 0004.scaffold00019 777190 1 T C scaffold24145 ScafM SNP 0004.scaffold00019 777194 1 G A scaffold24145 ScafM SNP 0004.scaffold00019 777209 1 G T scaffold24145 ScafM SNP 0004.scaffold00019 777223 1 G T scaffold24145 ScafM SNP 0004.scaffold00019 777236 2 GA AC scaffold24145 ReadM SNP 0004.scaffold00019 792155 1 C G - ReadM SNP 0004.scaffold00019 792178 1 T C - ReadM SNP 0004.scaffold00019 792237 1 T C - ReadM SNP 0004.scaffold00019 792287 1 G A - ReadM SNP 0004.scaffold00019 792706 1 A T - ReadM INDEL 0004.scaffold00019 792716 1 T . - ReadM SNP 0004.scaffold00019 798071 1 A G - ReadM SNP 0004.scaffold00019 798155 1 A C - ReadM SNP 0004.scaffold00019 798399 1 C T - ReadM SNP 0004.scaffold00019 798404 1 C T - ScafM SNP 0004.scaffold00019 798434 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 798465 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 798492 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 798498 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 798503 1 A G scaffold9343 Both SNP 0004.scaffold00019 798618 1 C G scaffold9343 ScafM SNP 0004.scaffold00019 798642 1 C G scaffold9343 Both SNP 0004.scaffold00019 798662 1 T G scaffold9343 Both SNP 0004.scaffold00019 798668 1 A G scaffold9343 Both SNP 0004.scaffold00019 798722 1 G A scaffold9343 ScafM INDEL 0004.scaffold00019 798769 10 .......... AGAATGACGA scaffold9343 ScafM SNP 0004.scaffold00019 798813 1 C T scaffold9343 Both SNP 0004.scaffold00019 798851 1 C G scaffold9343 Both SNP 0004.scaffold00019 798869 1 A G scaffold9343 Both SNP 0004.scaffold00019 798885 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 798927 1 A G scaffold9343 Both SNP 0004.scaffold00019 798985 2 TA CG scaffold9343 Both SNP 0004.scaffold00019 799024 1 G T scaffold9343 Both INDEL 0004.scaffold00019 799063 1 T . scaffold9343 Both SNP 0004.scaffold00019 799187 1 A G scaffold9343 Both SNP 0004.scaffold00019 799242 1 A G scaffold9343 Both SNP 0004.scaffold00019 799293 1 A G scaffold9343 Both SNP 0004.scaffold00019 799343 1 C G scaffold9343 Both SNP 0004.scaffold00019 799357 1 T A scaffold9343 Both SNP 0004.scaffold00019 799524 1 T A scaffold9343 Both SNP 0004.scaffold00019 799564 1 T G scaffold9343 Both SNP 0004.scaffold00019 799589 1 A G scaffold9343 Both SNP 0004.scaffold00019 799761 1 G A scaffold9343 Both SNP 0004.scaffold00019 799772 1 T G scaffold9343 Both SNP 0004.scaffold00019 799775 1 G A scaffold9343 Both SNP 0004.scaffold00019 799817 1 C G scaffold9343 Both SNP 0004.scaffold00019 799842 1 A G scaffold9343 Both SNP 0004.scaffold00019 799863 1 T C scaffold9343 Both SNP 0004.scaffold00019 799885 1 G A scaffold9343 Both SNP 0004.scaffold00019 799897 1 G C scaffold9343 ScafM SNP 0004.scaffold00019 799953 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 799962 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 799968 1 T G scaffold9343 ScafM SNP 0004.scaffold00019 799977 1 G T scaffold9343 Both SNP 0004.scaffold00019 800001 1 C T scaffold9343 Both SNP 0004.scaffold00019 800026 1 C T scaffold9343 Both SNP 0004.scaffold00019 800045 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800091 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800095 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 800107 1 A G scaffold9343 Both SNP 0004.scaffold00019 800131 1 T G scaffold9343 Both SNP 0004.scaffold00019 800147 1 T C scaffold9343 Both SNP 0004.scaffold00019 800186 1 T C scaffold9343 Both SNP 0004.scaffold00019 800237 1 A C scaffold9343 Both SNP 0004.scaffold00019 800268 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800308 1 C G scaffold9343 ScafM SNP 0004.scaffold00019 800326 1 C G scaffold9343 ScafM SNP 0004.scaffold00019 800337 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 800351 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 800371 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 800385 1 G A scaffold9343 Both SNP 0004.scaffold00019 800439 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800469 2 TG CA scaffold9343 ScafM SNP 0004.scaffold00019 800477 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 800496 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 800503 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 800505 1 G C scaffold9343 Both SNP 0004.scaffold00019 800543 1 C T scaffold9343 Both SNP 0004.scaffold00019 800572 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 800612 1 G C scaffold9343 ScafM SNP 0004.scaffold00019 800616 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 800638 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800643 2 CG TA scaffold9343 ScafM SNP 0004.scaffold00019 800664 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 800713 1 C A scaffold9343 ScafM SNP 0004.scaffold00019 800733 2 CT TA scaffold9343 ScafM SNP 0004.scaffold00019 800743 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800761 2 CC AT scaffold9343 ScafM SNP 0004.scaffold00019 800787 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 800792 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 800794 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 800796 1 G T scaffold9343 Both SNP 0004.scaffold00019 800821 1 G A scaffold9343 Both SNP 0004.scaffold00019 800904 1 T C scaffold9343 Both SNP 0004.scaffold00019 800975 1 C T scaffold9343 Both SNP 0004.scaffold00019 801012 1 T C scaffold9343 Both SNP 0004.scaffold00019 801112 1 A C scaffold9343 Both SNP 0004.scaffold00019 801138 1 G A scaffold9343 Both SNP 0004.scaffold00019 801148 1 A G scaffold9343 Both SNP 0004.scaffold00019 801304 1 G A scaffold9343 Both SNP 0004.scaffold00019 801311 1 G A scaffold9343 Both SNP 0004.scaffold00019 801324 1 T C scaffold9343 Both SNP 0004.scaffold00019 801387 1 A C scaffold9343 Both SNP 0004.scaffold00019 801401 1 C A scaffold9343 Both SNP 0004.scaffold00019 801410 1 T C scaffold9343 Both SNP 0004.scaffold00019 801445 1 G T scaffold9343 Both SNP 0004.scaffold00019 801465 1 C A scaffold9343 Both SNP 0004.scaffold00019 801477 1 C A scaffold9343 Both SNP 0004.scaffold00019 801654 1 T C scaffold9343 Both SNP 0004.scaffold00019 801675 1 G T scaffold9343 Both SNP 0004.scaffold00019 801680 1 A G scaffold9343 Both SNP 0004.scaffold00019 801735 1 C T scaffold9343 Both SNP 0004.scaffold00019 801747 1 A T scaffold9343 Both SNP 0004.scaffold00019 801792 1 A G scaffold9343 Both SNP 0004.scaffold00019 801921 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 802049 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 802051 1 G C scaffold9343 Both SNP 0004.scaffold00019 802101 1 T A scaffold9343 ScafM INDEL 0004.scaffold00019 802158 27 ........................... GAAGAAGCTCATAGACTTGTTAACAAT scaffold9343 Both SNP 0004.scaffold00019 802306 1 A C scaffold9343 Both SNP 0004.scaffold00019 802342 1 G A scaffold9343 Both SNP 0004.scaffold00019 802347 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 802413 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 802498 1 T C scaffold9343 Both SNP 0004.scaffold00019 802527 1 T C scaffold9343 Both SNP 0004.scaffold00019 802548 1 T C scaffold9343 Both SNP 0004.scaffold00019 802584 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 802592 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 802606 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 802667 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 802671 1 G A scaffold9343 Both SNP 0004.scaffold00019 802704 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 802717 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 802770 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 802779 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 802784 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 802815 1 T A scaffold9343 Both SNP 0004.scaffold00019 802917 1 C T scaffold9343 Both SNP 0004.scaffold00019 802941 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 802991 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 803008 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 803023 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 803028 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 803033 1 T C scaffold9343 Both SNP 0004.scaffold00019 803071 1 G T scaffold9343 Both SNP 0004.scaffold00019 803124 1 G A scaffold9343 Both SNP 0004.scaffold00019 803154 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 803221 2 TG CA scaffold9343 Both SNP 0004.scaffold00019 803280 1 T G scaffold9343 ReadM SNP 0004.scaffold00019 803359 1 A T - ReadM SNP 0004.scaffold00019 803442 1 G T - ReadM SNP 0004.scaffold00019 803462 1 G T - ReadM SNP 0004.scaffold00019 803502 1 C G - ReadM SNP 0004.scaffold00019 803540 1 G A - ReadM SNP 0004.scaffold00019 803573 1 C G - ReadM SNP 0004.scaffold00019 803596 1 A T - ReadM SNP 0004.scaffold00019 803616 1 G A - ReadM SNP 0004.scaffold00019 803665 1 A G - ReadM SNP 0004.scaffold00019 803672 1 A T - ReadM SNP 0004.scaffold00019 803737 1 G A - ReadM SNP 0004.scaffold00019 803743 1 C T - ReadM SNP 0004.scaffold00019 803752 1 A G - ReadM SNP 0004.scaffold00019 803885 1 A C - ReadM SNP 0004.scaffold00019 804280 1 G A - ReadM SNP 0004.scaffold00019 804434 1 G A - ReadM SNP 0004.scaffold00019 804451 1 A C - ReadM SNP 0004.scaffold00019 804508 1 C T - ReadM SNP 0004.scaffold00019 804564 1 A G - ReadM SNP 0004.scaffold00019 804593 1 C A - ReadM SNP 0004.scaffold00019 804645 1 C T - ReadM SNP 0004.scaffold00019 804711 1 T A - ReadM SNP 0004.scaffold00019 804728 1 C T - ReadM SNP 0004.scaffold00019 804730 1 A G - ReadM SNP 0004.scaffold00019 804796 1 T G - ReadM SNP 0004.scaffold00019 804889 1 G A - ReadM SNP 0004.scaffold00019 804909 1 C T - ReadM SNP 0004.scaffold00019 804964 1 T G - ReadM SNP 0004.scaffold00019 805007 1 C T - ReadM SNP 0004.scaffold00019 805012 1 A G - ReadM INDEL 0004.scaffold00019 805066 1 . G - ReadM SNP 0004.scaffold00019 805354 1 C T - ReadM SNP 0004.scaffold00019 805357 1 C A - ReadM SNP 0004.scaffold00019 805391 1 C T - Both SNP 0004.scaffold00019 805478 1 C T scaffold9343 Both SNP 0004.scaffold00019 805486 1 C T scaffold9343 Both SNP 0004.scaffold00019 805537 1 A T scaffold9343 ReadM SNP 0004.scaffold00019 805728 1 T A - ReadM SNP 0004.scaffold00019 805836 1 A G - ReadM SNP 0004.scaffold00019 805841 1 A G - ReadM SNP 0004.scaffold00019 805996 1 T C - ReadM SNP 0004.scaffold00019 806028 1 G C - ReadM SNP 0004.scaffold00019 806255 1 G C - Both SNP 0004.scaffold00019 806320 1 T C scaffold9343 Both SNP 0004.scaffold00019 806331 1 G A scaffold9343 ScafM SNP 0004.scaffold00019 806349 1 C G scaffold9343 ScafM SNP 0004.scaffold00019 806356 1 T G scaffold9343 Both SNP 0004.scaffold00019 806390 1 C T scaffold9343 ReadM SNP 0004.scaffold00019 806430 1 C A - ReadM SNP 0004.scaffold00019 806464 1 T C - ScafM SNP 0004.scaffold00019 806583 2 CT AC scaffold9343 ScafM INDEL 0004.scaffold00019 806598 1 C . scaffold9343 ScafM SNP 0004.scaffold00019 806624 1 T A scaffold9343 ScafM SNP 0004.scaffold00019 806627 1 C T scaffold9343 Both SNP 0004.scaffold00019 806677 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 806750 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 806836 1 T C scaffold9343 ScafM SNP 0004.scaffold00019 806838 1 A G scaffold9343 ScafM SNP 0004.scaffold00019 806845 1 C T scaffold9343 ScafM SNP 0004.scaffold00019 806880 1 A C scaffold9343 ScafM SNP 0004.scaffold00019 806890 1 A T scaffold9343 ScafM SNP 0005.scaffold00021 1051 1 A G scaffold7868 ScafM SNP 0005.scaffold00021 1072 1 T C scaffold7868 ScafM SNP 0005.scaffold00021 1123 1 A G scaffold7868 Both SNP 0005.scaffold00021 1185 1 A T scaffold7868 ScafM SNP 0005.scaffold00021 1270 1 C T scaffold7868 Both SNP 0005.scaffold00021 1349 1 C T scaffold7868 ReadM SNP 0005.scaffold00021 6625 1 A T - ReadM SNP 0005.scaffold00021 6909 1 A G - ReadM INDEL 0005.scaffold00021 7840 1 . A - ReadM SNP 0005.scaffold00021 7918 1 T G - Both SNP 0005.scaffold00021 9290 1 G T scaffold7868 Both SNP 0005.scaffold00021 9297 1 A G scaffold7868 Both SNP 0005.scaffold00021 9716 1 G A scaffold7868 Both SNP 0005.scaffold00021 9766 1 A G scaffold7868 Both SNP 0005.scaffold00021 9910 1 G T scaffold7868 Both SNP 0005.scaffold00021 10125 1 G T scaffold7868 Both SNP 0005.scaffold00021 10599 1 G C scaffold7868 Both INDEL 0005.scaffold00021 10675 1 . T scaffold7868 Both SNP 0005.scaffold00021 10697 1 A T scaffold7868 Both SNP 0005.scaffold00021 11106 1 G A scaffold7868 ScafM SNP 0005.scaffold00021 11173 1 A T scaffold7868 ScafM INDEL 0005.scaffold00021 11251 3 ... ACA scaffold7868 Both SNP 0005.scaffold00021 11617 1 T C scaffold7868 Both SNP 0005.scaffold00021 11676 1 A C scaffold7868 ScafM SNP 0005.scaffold00021 11854 1 G A scaffold7868 Both INDEL 0005.scaffold00021 12230 1 A . scaffold7868 Both SNP 0005.scaffold00021 12245 1 C A scaffold7868 Both SNP 0005.scaffold00021 12345 1 T A scaffold7868 Both SNP 0005.scaffold00021 12754 1 C T scaffold7868 ScafM SNP 0005.scaffold00021 12838 1 C T scaffold7868 ScafM SNP 0005.scaffold00021 12866 1 A G scaffold7868 ReadM SNP 0005.scaffold00021 13564 1 G T - ReadM SNP 0005.scaffold00021 13586 1 G T - ReadM SNP 0005.scaffold00021 13991 1 A G - ReadM SNP 0005.scaffold00021 14214 1 C A - ReadM SNP 0005.scaffold00021 14602 1 G A - ReadM SNP 0005.scaffold00021 14638 1 T G - ReadM SNP 0005.scaffold00021 15233 1 G C - ReadM SNP 0005.scaffold00021 15323 1 G A - ReadM INDEL 0005.scaffold00021 15423 1 T . - ReadM SNP 0005.scaffold00021 16328 1 G A - ReadM SNP 0005.scaffold00021 16718 1 A G - ReadM INDEL 0005.scaffold00021 16938 1 . T - ReadM SNP 0005.scaffold00021 17218 1 T C - Both SNP 0005.scaffold00021 17625 1 A C scaffold17315 ScafM SNP 0005.scaffold00021 17686 2 TT GC scaffold17315 ScafM SNP 0005.scaffold00021 17943 1 C T scaffold17315 Both SNP 0005.scaffold00021 18344 1 C T scaffold17315 Both SNP 0005.scaffold00021 18402 1 A T scaffold17315 ReadM SNP 0005.scaffold00021 18565 1 A T - ReadM SNP 0005.scaffold00021 18597 1 T G - ReadM SNP 0005.scaffold00021 18775 1 A G - Both SNP 0005.scaffold00021 18784 1 G A scaffold17315 Both SNP 0005.scaffold00021 18815 1 C T scaffold17315 ScafM SNP 0005.scaffold00021 18846 2 GT TA scaffold17315 Both SNP 0005.scaffold00021 19033 1 G A scaffold17315 ScafM SNP 0005.scaffold00021 19185 1 T A scaffold17315 Both SNP 0005.scaffold00021 19570 1 T C scaffold17315 Both SNP 0005.scaffold00021 19706 1 C A scaffold17315 Both SNP 0005.scaffold00021 19803 1 A G scaffold17315 Both SNP 0005.scaffold00021 19877 1 G C scaffold17315 Both SNP 0005.scaffold00021 19943 1 G T scaffold17315 Both SNP 0005.scaffold00021 20431 1 C G scaffold17315 Both INDEL 0005.scaffold00021 20500 1 . A scaffold17315 ScafM SNP 0005.scaffold00021 20663 1 C T scaffold17315 ScafM INDEL 0005.scaffold00021 20698 2 .. TA scaffold17315 ScafM SNP 0005.scaffold00021 20709 1 A C scaffold17315 ReadM SNP 0005.scaffold00021 20782 1 C G - ReadM SNP 0005.scaffold00021 20984 1 A C - ReadM INDEL 0005.scaffold00021 21147 1 T . - ReadM SNP 0005.scaffold00021 21189 1 T C - ReadM SNP 0005.scaffold00021 21314 1 C T - ReadM SNP 0005.scaffold00021 21571 1 C T - ReadM INDEL 0005.scaffold00021 21598 1 G . - ReadM SNP 0005.scaffold00021 21641 1 A G - ReadM SNP 0005.scaffold00021 21794 1 G A - ReadM SNP 0005.scaffold00021 21835 1 G A - ReadM SNP 0005.scaffold00021 21904 1 A C - ReadM SNP 0005.scaffold00021 22008 1 C T - ReadM SNP 0005.scaffold00021 22086 1 T C - ReadM SNP 0005.scaffold00021 22093 1 A G - ReadM SNP 0005.scaffold00021 22419 1 C T - ReadM SNP 0005.scaffold00021 22463 1 T C - ReadM SNP 0005.scaffold00021 22574 1 G A - ScafM SNP 0005.scaffold00021 23451 1 A G scaffold17315 Both SNP 0005.scaffold00021 23555 1 G A scaffold17315 Both SNP 0005.scaffold00021 23683 1 C A scaffold17315 Both SNP 0005.scaffold00021 23732 1 A G scaffold17315 Both SNP 0005.scaffold00021 23849 1 T C scaffold17315 Both SNP 0005.scaffold00021 23902 1 G C scaffold17315 Both SNP 0005.scaffold00021 23972 1 A G scaffold17315 Both SNP 0005.scaffold00021 24029 1 G A scaffold17315 Both SNP 0005.scaffold00021 24127 1 C T scaffold17315 Both INDEL 0005.scaffold00021 24152 1 T . scaffold17315 ScafM SNP 0005.scaffold00021 24199 1 G C scaffold17315 ScafM INDEL 0005.scaffold00021 24204 4 .... TTTC scaffold17315 Both SNP 0005.scaffold00021 24261 1 T C scaffold17315 ReadM SNP 0005.scaffold00021 24372 1 A G - ReadM INDEL 0005.scaffold00021 24856 1 T . - ReadM SNP 0005.scaffold00021 24933 1 C T - ReadM SNP 0005.scaffold00021 25031 1 G A - ReadM SNP 0005.scaffold00021 25036 1 T C - ReadM SNP 0005.scaffold00021 25111 1 A G - ReadM SNP 0005.scaffold00021 25176 1 G A - ReadM SNP 0005.scaffold00021 25271 1 A C - ReadM SNP 0005.scaffold00021 25300 1 A C - ReadM SNP 0005.scaffold00021 25418 1 A G - ReadM SNP 0005.scaffold00021 25452 1 T C - ReadM SNP 0005.scaffold00021 25477 1 G A - ReadM SNP 0005.scaffold00021 25553 1 A G - ReadM SNP 0005.scaffold00021 25593 1 G T - Both SNP 0005.scaffold00021 26405 1 C T scaffold17315 Both SNP 0005.scaffold00021 26469 1 T C scaffold17315 ReadM SNP 0005.scaffold00021 26560 1 A G - ReadM SNP 0005.scaffold00021 27101 1 T C - Both INDEL 0005.scaffold00021 27192 1 T . scaffold26989 ScafM SNP 0005.scaffold00021 27243 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27251 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27253 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27261 1 A T scaffold26989 ScafM SNP 0005.scaffold00021 27266 1 T C scaffold26989 ScafM SNP 0005.scaffold00021 27268 1 G A scaffold26989 ScafM SNP 0005.scaffold00021 27303 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27320 1 T A scaffold26989 ScafM SNP 0005.scaffold00021 27338 1 C T scaffold26989 ScafM SNP 0005.scaffold00021 27356 1 T G scaffold26989 ScafM SNP 0005.scaffold00021 27362 1 C G scaffold26989 ScafM SNP 0005.scaffold00021 27376 1 T C scaffold26989 ScafM SNP 0005.scaffold00021 27382 1 C T scaffold26989 ScafM SNP 0005.scaffold00021 27402 1 C A scaffold26989 ScafM SNP 0005.scaffold00021 27416 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27461 1 A G scaffold26989 ScafM SNP 0005.scaffold00021 27464 1 G T scaffold26989 ScafM SNP 0005.scaffold00021 27475 1 G A scaffold26989 ScafM SNP 0005.scaffold00021 27530 1 G A scaffold26989 ScafM SNP 0005.scaffold00021 27533 1 T A scaffold26989 ScafM SNP 0005.scaffold00021 27547 1 G T scaffold26989 ReadM SNP 0005.scaffold00021 27787 1 A G - ReadM SNP 0005.scaffold00021 28032 1 C T - ReadM SNP 0005.scaffold00021 28096 1 C T - ReadM SNP 0005.scaffold00021 28205 1 G A - ReadM SNP 0005.scaffold00021 28231 1 A T - ReadM SNP 0005.scaffold00021 28300 1 G A - ReadM SNP 0005.scaffold00021 28310 1 T A - ScafM SNP 0005.scaffold00021 28446 2 TA CG scaffold26989 ScafM INDEL 0005.scaffold00021 28483 1 . A scaffold26989 ScafM INDEL 0005.scaffold00021 28484 5 ..... GGAAA scaffold26989 ScafM INDEL 0005.scaffold00021 28487 17 ................. GGAGTGAGATATTTTTG scaffold26989 ScafM INDEL 0005.scaffold00021 28488 3 ... CGT scaffold26989 ScafM INDEL 0005.scaffold00021 28490 3 ... AAT scaffold26989 ReadM SNP 0005.scaffold00021 28493 1 T A - ScafM SNP 0005.scaffold00021 28513 2 AG TA scaffold26989 ScafM INDEL 0005.scaffold00021 28538 1 . A scaffold26989 ScafM SNP 0005.scaffold00021 28540 1 T G scaffold26989 ReadM SNP 0005.scaffold00021 28853 1 C T - ReadM SNP 0005.scaffold00021 29083 1 T C - ReadM INDEL 0005.scaffold00021 29184 1 T . - Both INDEL 0005.scaffold00021 29444 3 ... TGA scaffold12317 Both SNP 0005.scaffold00021 29606 1 C T scaffold12317 Both SNP 0005.scaffold00021 29733 1 A G scaffold12317 ReadM SNP 0005.scaffold00021 29819 1 C T - ReadM SNP 0005.scaffold00021 29826 1 C T - ReadM SNP 0005.scaffold00021 30164 1 A G - ReadM SNP 0005.scaffold00021 30182 1 T G - ReadM SNP 0005.scaffold00021 30189 1 T C - ReadM SNP 0005.scaffold00021 30242 1 A G - ReadM SNP 0005.scaffold00021 30375 1 G C - ReadM INDEL 0005.scaffold00021 30378 1 G . - ReadM SNP 0005.scaffold00021 30483 1 C T - ReadM SNP 0005.scaffold00021 30587 1 C A - ReadM SNP 0005.scaffold00021 30826 1 A G - ReadM SNP 0005.scaffold00021 30833 1 A G - Both SNP 0005.scaffold00021 30868 1 G A scaffold12317 Both SNP 0005.scaffold00021 30923 1 C T scaffold12317 ReadM SNP 0005.scaffold00021 31182 1 A G - ReadM INDEL 0005.scaffold00021 31285 1 . A - ReadM SNP 0005.scaffold00021 31545 1 T C - ReadM SNP 0005.scaffold00021 31585 1 G A - ReadM SNP 0005.scaffold00021 31617 1 T C - ReadM SNP 0005.scaffold00021 31763 1 G T - ReadM SNP 0005.scaffold00021 31922 1 T C - ReadM SNP 0005.scaffold00021 31966 1 G A - ReadM SNP 0005.scaffold00021 32005 1 C A - ReadM SNP 0005.scaffold00021 32038 1 C T - ReadM SNP 0005.scaffold00021 32508 1 G A - ReadM SNP 0005.scaffold00021 32989 1 T C - ReadM SNP 0005.scaffold00021 33034 1 G C - ReadM SNP 0005.scaffold00021 33319 1 C T - ScafM SNP 0005.scaffold00021 33444 1 T C scaffold12317 ScafM SNP 0005.scaffold00021 33517 1 A G scaffold12317 ScafM INDEL 0005.scaffold00021 33641 2 TT .. scaffold12317 ScafM INDEL 0005.scaffold00021 33645 1 T . scaffold12317 ScafM SNP 0005.scaffold00021 34598 1 A C scaffold12317 ScafM SNP 0005.scaffold00021 34603 1 A G scaffold12317 ScafM SNP 0005.scaffold00021 34634 1 C T scaffold12317 ScafM INDEL 0005.scaffold00021 34639 1 . T scaffold12317 Both SNP 0005.scaffold00021 34702 1 C A scaffold12317 Both SNP 0005.scaffold00021 34714 1 G C scaffold12317 ReadM SNP 0005.scaffold00021 34844 1 A G - ReadM INDEL 0005.scaffold00021 34881 1 . C - Both SNP 0005.scaffold00021 35207 1 G T scaffold12317 ReadM SNP 0005.scaffold00021 35650 1 A C - ReadM SNP 0005.scaffold00021 35799 1 C A - ReadM SNP 0005.scaffold00021 35918 1 G A - ReadM SNP 0005.scaffold00021 36126 1 C T - ReadM INDEL 0005.scaffold00021 36180 2 .. AC - ReadM INDEL 0005.scaffold00021 36182 2 .. AA - ReadM SNP 0005.scaffold00021 36387 1 T G - ReadM SNP 0005.scaffold00021 36882 1 C T - ReadM SNP 0005.scaffold00021 37070 1 A C - ReadM SNP 0005.scaffold00021 37165 1 C A - ReadM SNP 0005.scaffold00021 37222 1 A C - ReadM SNP 0005.scaffold00021 37339 1 T C - ReadM SNP 0005.scaffold00021 37981 1 A G - ReadM SNP 0005.scaffold00021 38202 1 C G - Both SNP 0005.scaffold00021 38343 1 G A scaffold12317 ReadM SNP 0005.scaffold00021 38566 1 C G - ReadM SNP 0005.scaffold00021 38596 1 G C - ReadM SNP 0005.scaffold00021 38608 1 C T - ReadM SNP 0005.scaffold00021 38624 1 T C - ReadM SNP 0005.scaffold00021 38832 1 A C - ReadM SNP 0005.scaffold00021 38882 1 C T - ReadM SNP 0005.scaffold00021 39161 1 T A - ReadM SNP 0005.scaffold00021 39221 1 T A - ReadM SNP 0005.scaffold00021 39233 1 C A - ReadM SNP 0005.scaffold00021 39272 1 C G - ReadM INDEL 0005.scaffold00021 39923 1 . T - Both SNP 0005.scaffold00021 40013 1 G A scaffold12317 ReadM SNP 0005.scaffold00021 40119 1 C T - ReadM SNP 0005.scaffold00021 40877 1 A G - ReadM INDEL 0005.scaffold00021 41146 2 .. AT - ReadM SNP 0005.scaffold00021 41212 1 G A - ReadM SNP 0005.scaffold00021 42623 1 C A - ReadM SNP 0005.scaffold00021 42684 1 G A - ReadM SNP 0005.scaffold00021 42695 1 T C - ReadM INDEL 0005.scaffold00021 42773 3 AAA ... - ReadM SNP 0005.scaffold00021 43045 1 C T - ReadM INDEL 0005.scaffold00021 43354 1 . T - ReadM SNP 0005.scaffold00021 43518 1 C T - ReadM SNP 0005.scaffold00021 43583 1 C T - ReadM SNP 0005.scaffold00021 43588 1 A G - ReadM SNP 0005.scaffold00021 43625 1 A G - ReadM SNP 0005.scaffold00021 43996 1 G A - ReadM SNP 0005.scaffold00021 44104 1 G T - ReadM SNP 0005.scaffold00021 44321 1 A T - ReadM SNP 0005.scaffold00021 44357 1 A G - ReadM SNP 0005.scaffold00021 44747 1 C T - ReadM SNP 0005.scaffold00021 44836 1 C T - ReadM SNP 0005.scaffold00021 44930 1 C T - ReadM SNP 0005.scaffold00021 44965 1 T C - ReadM SNP 0005.scaffold00021 45100 1 C T - ReadM SNP 0005.scaffold00021 45437 1 G A - ReadM SNP 0005.scaffold00021 45565 1 G A - ReadM SNP 0005.scaffold00021 45583 1 T C - ReadM SNP 0005.scaffold00021 45633 1 G T - ReadM SNP 0005.scaffold00021 45794 1 T C - ReadM SNP 0005.scaffold00021 45827 1 A C - ReadM SNP 0005.scaffold00021 45913 1 C T - ReadM SNP 0005.scaffold00021 45933 1 A T - ReadM SNP 0005.scaffold00021 45965 1 C T - ReadM SNP 0005.scaffold00021 46028 1 T C - ReadM SNP 0005.scaffold00021 46050 1 G A - ReadM SNP 0005.scaffold00021 46127 1 C T - ReadM SNP 0005.scaffold00021 46192 1 T G - ReadM SNP 0005.scaffold00021 46394 1 A T - ReadM SNP 0005.scaffold00021 46402 1 G C - ReadM SNP 0005.scaffold00021 46411 1 G A - ReadM SNP 0005.scaffold00021 46507 1 T C - ReadM SNP 0005.scaffold00021 46513 1 T A - ReadM SNP 0005.scaffold00021 46738 1 C T - ReadM SNP 0005.scaffold00021 46745 1 T G - ReadM SNP 0005.scaffold00021 46749 1 G A - ReadM SNP 0005.scaffold00021 46866 1 A C - ReadM SNP 0005.scaffold00021 47184 1 C T - ReadM SNP 0005.scaffold00021 47225 1 T A - ReadM SNP 0005.scaffold00021 47514 1 G A - ReadM SNP 0005.scaffold00021 47663 1 A C - ReadM SNP 0005.scaffold00021 47729 1 C T - ReadM SNP 0005.scaffold00021 47837 1 G C - ReadM SNP 0005.scaffold00021 47924 1 T A - ReadM SNP 0005.scaffold00021 48310 1 T C - ReadM SNP 0005.scaffold00021 48315 1 G C - ReadM SNP 0005.scaffold00021 48437 1 C A - ReadM SNP 0005.scaffold00021 48571 1 C T - ReadM SNP 0005.scaffold00021 48579 1 T G - ReadM SNP 0005.scaffold00021 48621 1 C T - ReadM SNP 0005.scaffold00021 48764 1 A G - ReadM SNP 0005.scaffold00021 48795 1 C T - ReadM SNP 0005.scaffold00021 48867 1 A G - ReadM SNP 0005.scaffold00021 49173 1 G T - ReadM SNP 0005.scaffold00021 49223 1 A G - ReadM SNP 0005.scaffold00021 49258 1 G C - ReadM SNP 0005.scaffold00021 49279 1 T A - ReadM SNP 0005.scaffold00021 49512 1 C G - ReadM SNP 0005.scaffold00021 49568 1 A C - ReadM SNP 0005.scaffold00021 49581 1 C A - ReadM SNP 0005.scaffold00021 49601 1 T G - ReadM INDEL 0005.scaffold00021 49634 1 C . - ReadM SNP 0005.scaffold00021 49640 1 A G - ReadM SNP 0005.scaffold00021 49768 1 A C - ReadM INDEL 0005.scaffold00021 49801 2 .. GC - Both SNP 0005.scaffold00021 50214 1 A G scaffold19697 ReadM SNP 0005.scaffold00021 50261 1 C A - ReadM SNP 0005.scaffold00021 50742 1 C T - ReadM SNP 0005.scaffold00021 50859 1 A T - ReadM SNP 0005.scaffold00021 51074 1 T A - ReadM INDEL 0005.scaffold00021 51129 1 A . - ReadM SNP 0005.scaffold00021 51217 1 T G - ReadM SNP 0005.scaffold00021 51352 1 A C - ReadM INDEL 0005.scaffold00021 53837 1 . T - Both SNP 0005.scaffold00021 54404 1 C T scaffold19697 Both SNP 0005.scaffold00021 54571 1 G C scaffold19697 Both SNP 0005.scaffold00021 54686 1 A G scaffold19697 Both SNP 0005.scaffold00021 54822 1 G T scaffold19697 Both SNP 0005.scaffold00021 54938 1 G A scaffold19697 ScafM SNP 0005.scaffold00021 54954 2 TC CT scaffold19697 Both SNP 0005.scaffold00021 54981 1 T C scaffold19697 ReadM SNP 0005.scaffold00021 55105 1 A G - ReadM SNP 0005.scaffold00021 55183 1 C A - ReadM SNP 0005.scaffold00021 55372 1 A G - ReadM SNP 0005.scaffold00021 55409 1 A G - ReadM SNP 0005.scaffold00021 55552 1 C T - ScafM INDEL 0005.scaffold00021 57559 10 .......... AATATCAAAC scaffold19697 Both SNP 0005.scaffold00021 57599 1 G A scaffold19697 Both SNP 0005.scaffold00021 57613 1 A C scaffold19697 ScafM SNP 0005.scaffold00021 57821 1 T A scaffold19697 Both SNP 0005.scaffold00021 58069 1 T C scaffold19697 Both SNP 0005.scaffold00021 58075 1 C T scaffold19697 ScafM SNP 0005.scaffold00021 58144 1 T C scaffold19697 ScafM SNP 0005.scaffold00021 58163 1 T C scaffold19697 ScafM SNP 0005.scaffold00021 58372 1 C T scaffold19697 ScafM SNP 0005.scaffold00021 58595 1 T A scaffold19697 Both INDEL 0005.scaffold00021 58741 2 AA .. scaffold19697 Both SNP 0005.scaffold00021 58814 1 T C scaffold19697 Both SNP 0005.scaffold00021 58886 1 G T scaffold19697 Both SNP 0005.scaffold00021 58903 1 G A scaffold19697 ScafM INDEL 0005.scaffold00021 59191 2 .. AA scaffold19697 ScafM SNP 0005.scaffold00021 59217 1 T C scaffold19697 Both SNP 0005.scaffold00021 59283 1 C T scaffold19697 ScafM SNP 0005.scaffold00021 59306 1 A G scaffold19697 ReadM SNP 0005.scaffold00021 59335 1 T C - ReadM SNP 0005.scaffold00021 59366 1 A C - ScafM SNP 0005.scaffold00021 59380 1 T A scaffold19697 ScafM SNP 0005.scaffold00021 59386 1 T C scaffold19697 Both INDEL 0005.scaffold00021 59486 1 T . scaffold19697 ScafM INDEL 0005.scaffold00021 59664 2 .. TC scaffold19697 Both SNP 0005.scaffold00021 59837 1 A G scaffold19697 ScafM INDEL 0005.scaffold00021 59871 1 . A scaffold19697 ReadM SNP 0005.scaffold00021 59878 1 G T - ScafM INDEL 0005.scaffold00021 59899 1 . C scaffold19697 ScafM INDEL 0005.scaffold00021 59923 8 ........ TTCTTTGA scaffold19697 ScafM SNP 0005.scaffold00021 59983 1 C T scaffold19697 ReadM SNP 0005.scaffold00021 60173 1 A G - ReadM SNP 0005.scaffold00021 60209 1 A G - ReadM INDEL 0005.scaffold00021 61481 3 AAC ... - ReadM SNP 0005.scaffold00021 61726 1 C T - ReadM SNP 0005.scaffold00021 61894 1 A G - ReadM SNP 0005.scaffold00021 61905 1 C T - ReadM SNP 0005.scaffold00021 62109 1 T C - ReadM INDEL 0005.scaffold00021 62189 1 G . - ReadM SNP 0005.scaffold00021 62229 1 C T - ReadM SNP 0005.scaffold00021 62349 1 G T - ReadM SNP 0005.scaffold00021 62741 1 T A - ReadM SNP 0005.scaffold00021 63086 1 A G - ReadM SNP 0005.scaffold00021 63266 1 G C - ReadM SNP 0005.scaffold00021 63347 1 C T - ReadM SNP 0005.scaffold00021 63351 1 C T - ReadM SNP 0005.scaffold00021 63422 1 G A - ReadM SNP 0005.scaffold00021 63459 1 C G - ReadM SNP 0005.scaffold00021 63609 1 T C - ReadM SNP 0005.scaffold00021 63612 1 G A - ReadM SNP 0005.scaffold00021 63799 1 T G - ReadM SNP 0005.scaffold00021 64199 1 G A - ReadM SNP 0005.scaffold00021 64266 1 C A - ReadM INDEL 0005.scaffold00021 64350 1 T . - ReadM SNP 0005.scaffold00021 64834 1 A T - ReadM SNP 0005.scaffold00021 65013 1 T A - ReadM SNP 0005.scaffold00021 65024 1 A G - ReadM SNP 0005.scaffold00021 65235 1 T A - ReadM SNP 0005.scaffold00021 65972 1 G C - ReadM SNP 0005.scaffold00021 66339 1 G A - ReadM INDEL 0005.scaffold00021 66413 1 . T - ReadM SNP 0005.scaffold00021 67372 1 A C - ReadM SNP 0005.scaffold00021 67380 1 T C - ReadM SNP 0005.scaffold00021 67491 1 A G - ReadM SNP 0005.scaffold00021 67534 1 C A - ReadM SNP 0005.scaffold00021 67560 1 G A - ReadM SNP 0005.scaffold00021 67622 1 G A - ReadM SNP 0005.scaffold00021 67675 1 G C - ReadM SNP 0005.scaffold00021 68021 1 C T - Both SNP 0005.scaffold00021 68207 1 C T scaffold35600 Both SNP 0005.scaffold00021 68315 1 G C scaffold35600 Both SNP 0005.scaffold00021 68360 1 C T scaffold35600 Both SNP 0005.scaffold00021 68382 1 G A scaffold35600 ScafM INDEL 0005.scaffold00021 68717 49 ................................................. ACTTGGCACTTGGCACTTGGCACTTGGCACTTGGCACTTGGCACTTGGC scaffold35600 Both SNP 0005.scaffold00021 69238 1 T C scaffold35600 Both SNP 0005.scaffold00021 69441 1 G A scaffold35600 ReadM SNP 0005.scaffold00021 69490 1 G A - ReadM SNP 0005.scaffold00021 70141 1 T G - ReadM SNP 0005.scaffold00021 70723 1 G A - ReadM SNP 0005.scaffold00021 71004 1 C T - ReadM INDEL 0005.scaffold00021 71386 1 . T - Both SNP 0005.scaffold00021 71695 1 G T scaffold41203 Both SNP 0005.scaffold00021 71744 1 T A scaffold41203 Both SNP 0005.scaffold00021 71926 1 A C scaffold41203 Both SNP 0005.scaffold00021 71961 1 G C scaffold41203 ScafM SNP 0005.scaffold00021 72267 1 T C scaffold41203 ScafM INDEL 0005.scaffold00021 72293 50 CTAAGGGCGTGCCTGGTTTCCATTTAACAATTAAGAGGGTATAATTTAGG .................................................. scaffold41203 ReadM SNP 0005.scaffold00021 72302 1 T C - ScafM SNP 0005.scaffold00021 72383 1 T G scaffold41203 Both SNP 0005.scaffold00021 72473 1 C A scaffold41203 ReadM SNP 0005.scaffold00021 73050 1 A G - ReadM SNP 0005.scaffold00021 73642 1 T C - ReadM SNP 0005.scaffold00021 73649 1 C A - ReadM SNP 0005.scaffold00021 75513 1 C A - ReadM SNP 0005.scaffold00021 75956 1 A G - ReadM SNP 0005.scaffold00021 76035 1 T C - ReadM SNP 0005.scaffold00021 77796 1 T G - ReadM SNP 0005.scaffold00021 78282 1 G T - ReadM SNP 0005.scaffold00021 78287 1 A G - ReadM SNP 0005.scaffold00021 78291 1 G T - ScafM SNP 0005.scaffold00021 78708 1 A C scaffold5593 Both SNP 0005.scaffold00021 78867 1 T G scaffold5593 ScafM SNP 0005.scaffold00021 79169 1 C T scaffold5593 Both SNP 0005.scaffold00021 79310 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 79635 1 G A scaffold5593 Both SNP 0005.scaffold00021 80056 1 A G scaffold5593 Both SNP 0005.scaffold00021 80211 1 T G scaffold5593 Both SNP 0005.scaffold00021 81052 1 T G scaffold5593 Both SNP 0005.scaffold00021 81068 1 C A scaffold5593 ScafM SNP 0005.scaffold00021 81150 2 AG CA scaffold5593 ScafM SNP 0005.scaffold00021 81560 1 A G scaffold5593 ReadM SNP 0005.scaffold00021 81798 1 T C - Both SNP 0005.scaffold00021 82461 1 T G scaffold5593 ScafM SNP 0005.scaffold00021 82886 2 AT GA scaffold5593 Both SNP 0005.scaffold00021 82892 1 C T scaffold5593 Both SNP 0005.scaffold00021 83110 1 T G scaffold5593 Both SNP 0005.scaffold00021 83284 1 G C scaffold5593 Both SNP 0005.scaffold00021 83510 1 G C scaffold5593 Both SNP 0005.scaffold00021 83519 2 TC GG scaffold5593 Both SNP 0005.scaffold00021 83634 1 A C scaffold5593 ScafM SNP 0005.scaffold00021 83713 1 C G scaffold5593 Both SNP 0005.scaffold00021 83854 1 G A scaffold5593 Both SNP 0005.scaffold00021 83912 1 C T scaffold5593 Both SNP 0005.scaffold00021 84102 1 C A scaffold5593 Both SNP 0005.scaffold00021 84330 1 C G scaffold5593 Both SNP 0005.scaffold00021 84418 1 G T scaffold5593 Both SNP 0005.scaffold00021 84464 1 G T scaffold5593 ReadM SNP 0005.scaffold00021 84535 1 A G - ReadM SNP 0005.scaffold00021 84721 1 A G - ReadM SNP 0005.scaffold00021 84894 1 A C - ReadM SNP 0005.scaffold00021 85083 2 AA GC - ReadM SNP 0005.scaffold00021 85092 1 C G - Both SNP 0005.scaffold00021 85324 1 G A scaffold5593 ReadM SNP 0005.scaffold00021 85516 1 C G - Both SNP 0005.scaffold00021 85618 1 C T scaffold5593 ScafM SNP 0005.scaffold00021 85622 2 AT TG scaffold5593 ScafM INDEL 0005.scaffold00021 85786 2 TC .. scaffold5593 ScafM SNP 0005.scaffold00021 85790 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 85797 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 85806 1 G A scaffold5593 Both SNP 0005.scaffold00021 85817 1 T C scaffold5593 Both SNP 0005.scaffold00021 85895 1 T C scaffold5593 Both SNP 0005.scaffold00021 85937 1 A G scaffold5593 Both SNP 0005.scaffold00021 86054 1 G A scaffold5593 Both SNP 0005.scaffold00021 86213 1 C T scaffold5593 ReadM SNP 0005.scaffold00021 86358 1 A G - ReadM SNP 0005.scaffold00021 86421 1 T C - ScafM SNP 0005.scaffold00021 86451 1 A G scaffold5593 ScafM SNP 0005.scaffold00021 86512 2 TG AT scaffold5593 ScafM SNP 0005.scaffold00021 86530 1 A G scaffold5593 ScafM INDEL 0005.scaffold00021 86533 1 T . scaffold5593 ScafM SNP 0005.scaffold00021 86604 1 T A scaffold5593 ScafM SNP 0005.scaffold00021 86611 1 C G scaffold5593 Both SNP 0005.scaffold00021 86645 1 T C scaffold5593 Both SNP 0005.scaffold00021 86726 1 G A scaffold5593 Both SNP 0005.scaffold00021 86783 1 C A scaffold5593 Both INDEL 0005.scaffold00021 86812 1 G . scaffold5593 ReadM SNP 0005.scaffold00021 87096 1 G C - Both SNP 0005.scaffold00021 87156 1 A T scaffold5593 Both SNP 0005.scaffold00021 87515 1 T A scaffold5593 Both SNP 0005.scaffold00021 87654 1 T C scaffold5593 Both SNP 0005.scaffold00021 87710 1 C T scaffold5593 Both SNP 0005.scaffold00021 87749 1 G C scaffold5593 Both SNP 0005.scaffold00021 87945 1 A G scaffold5593 Both SNP 0005.scaffold00021 88046 1 C A scaffold5593 ScafM INDEL 0005.scaffold00021 88069 46 .............................................. TCCCGTGGTGTCCAGCATCGTCAACCTACTCGATTGTTGTGTGACA scaffold5593 ScafM SNP 0005.scaffold00021 88079 1 C T scaffold5593 ScafM SNP 0005.scaffold00021 88100 1 C T scaffold5593 ScafM SNP 0005.scaffold00021 88114 1 A C scaffold5593 Both SNP 0005.scaffold00021 88147 1 A G scaffold5593 Both SNP 0005.scaffold00021 88164 1 G A scaffold5593 ReadM SNP 0005.scaffold00021 88678 1 G A - ReadM SNP 0005.scaffold00021 88753 1 C T - Both SNP 0005.scaffold00021 88906 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 89081 1 A T scaffold5593 ScafM SNP 0005.scaffold00021 89111 1 A C scaffold5593 ScafM INDEL 0005.scaffold00021 89144 1 G . scaffold5593 ScafM SNP 0005.scaffold00021 89152 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 89170 1 T C scaffold5593 ScafM SNP 0005.scaffold00021 89178 1 G A scaffold5593 ScafM SNP 0005.scaffold00021 89393 1 T A scaffold5593 ScafM SNP 0005.scaffold00021 89471 1 A C scaffold5593 ScafM SNP 0005.scaffold00021 89521 1 A C scaffold5593 ScafM SNP 0005.scaffold00021 89542 1 C A scaffold5593 ScafM SNP 0005.scaffold00021 89633 1 A T scaffold5593 ScafM SNP 0005.scaffold00021 89641 1 C T scaffold5593 ReadM SNP 0005.scaffold00021 89829 1 T G - ReadM SNP 0005.scaffold00021 90162 1 C G - ReadM SNP 0005.scaffold00021 90208 1 C T - ReadM SNP 0005.scaffold00021 90393 1 A G - ReadM SNP 0005.scaffold00021 90582 1 A G - ReadM SNP 0005.scaffold00021 90719 1 C G - ReadM SNP 0005.scaffold00021 90806 1 A T - ReadM SNP 0005.scaffold00021 91107 1 C T - ReadM SNP 0005.scaffold00021 91302 1 G A - ReadM SNP 0005.scaffold00021 91558 1 G C - ScafM SNP 0005.scaffold00021 91871 1 G A scaffold6787 ScafM SNP 0005.scaffold00021 91877 1 C T scaffold6787 ScafM SNP 0005.scaffold00021 91892 1 A G scaffold6787 Both SNP 0005.scaffold00021 93973 1 T A scaffold6787 Both SNP 0005.scaffold00021 94160 1 T A scaffold6787 Both SNP 0005.scaffold00021 94164 1 A T scaffold6787 Both SNP 0005.scaffold00021 94399 1 C G scaffold6787 ScafM SNP 0005.scaffold00021 94434 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 94607 1 G A scaffold6787 ScafM SNP 0005.scaffold00021 94620 1 T A scaffold6787 ScafM SNP 0005.scaffold00021 94681 1 G A scaffold6787 ReadM SNP 0005.scaffold00021 95325 1 G A - Both SNP 0005.scaffold00021 95381 1 G A scaffold6787 Both SNP 0005.scaffold00021 95422 1 G A scaffold6787 ReadM SNP 0005.scaffold00021 95458 1 A G - ReadM SNP 0005.scaffold00021 95468 1 T G - ReadM SNP 0005.scaffold00021 95522 1 G A - Both SNP 0005.scaffold00021 95636 1 G A scaffold6787 Both INDEL 0005.scaffold00021 95689 1 . T scaffold6787 ScafM SNP 0005.scaffold00021 95809 1 T A scaffold6787 ReadM SNP 0005.scaffold00021 95941 1 A C - ReadM SNP 0005.scaffold00021 95974 1 A C - ReadM SNP 0005.scaffold00021 96801 1 C A - ScafM SNP 0005.scaffold00021 96846 1 T C scaffold6787 Both SNP 0005.scaffold00021 96938 1 A G scaffold6787 Both SNP 0005.scaffold00021 97138 1 C A scaffold6787 Both SNP 0005.scaffold00021 97175 1 C T scaffold6787 Both SNP 0005.scaffold00021 97183 1 C G scaffold6787 Both SNP 0005.scaffold00021 97232 1 A T scaffold6787 Both SNP 0005.scaffold00021 97416 1 G A scaffold6787 Both SNP 0005.scaffold00021 97742 1 T C scaffold6787 Both SNP 0005.scaffold00021 97969 1 G A scaffold6787 Both SNP 0005.scaffold00021 98515 1 C T scaffold6787 Both SNP 0005.scaffold00021 98644 1 C A scaffold6787 Both SNP 0005.scaffold00021 98926 1 A G scaffold6787 Both SNP 0005.scaffold00021 98950 1 C G scaffold6787 ReadM SNP 0005.scaffold00021 99151 1 C T - ReadM SNP 0005.scaffold00021 99223 1 A G - ReadM SNP 0005.scaffold00021 99376 1 C T - Both SNP 0005.scaffold00021 99560 1 T G scaffold6787 Both SNP 0005.scaffold00021 99845 1 G A scaffold6787 Both SNP 0005.scaffold00021 99855 1 C G scaffold6787 Both SNP 0005.scaffold00021 100101 1 C T scaffold6787 Both INDEL 0005.scaffold00021 100143 2 GA .. scaffold6787 ScafM SNP 0005.scaffold00021 100273 1 C T scaffold6787 ScafM SNP 0005.scaffold00021 100310 1 T A scaffold6787 ScafM INDEL 0005.scaffold00021 100378 3 ... TAA scaffold6787 Both SNP 0005.scaffold00021 100542 1 A C scaffold6787 ScafM SNP 0005.scaffold00021 100640 1 G A scaffold6787 Both SNP 0005.scaffold00021 100990 1 T C scaffold6787 Both SNP 0005.scaffold00021 101074 1 G A scaffold6787 Both SNP 0005.scaffold00021 101269 1 A G scaffold6787 ScafM INDEL 0005.scaffold00021 101421 14 .............. TGCTGAAATTTTTT scaffold6787 ScafM SNP 0005.scaffold00021 101436 1 C T scaffold6787 ScafM SNP 0005.scaffold00021 101450 1 A C scaffold6787 Both SNP 0005.scaffold00021 101724 1 A T scaffold6787 ScafM SNP 0005.scaffold00021 101875 2 AG GT scaffold6787 Both SNP 0005.scaffold00021 102118 1 A G scaffold6787 Both SNP 0005.scaffold00021 102153 1 G A scaffold6787 Both SNP 0005.scaffold00021 102211 1 C G scaffold6787 Both SNP 0005.scaffold00021 102313 1 C A scaffold6787 Both SNP 0005.scaffold00021 102405 1 T C scaffold6787 ReadM SNP 0005.scaffold00021 103013 1 A G - ReadM SNP 0005.scaffold00021 103060 1 A C - ReadM SNP 0005.scaffold00021 103140 1 T C - ScafM SNP 0005.scaffold00021 103243 1 A G scaffold6787 ReadM SNP 0005.scaffold00021 103582 1 A G - ReadM SNP 0005.scaffold00021 103720 1 G A - ReadM SNP 0005.scaffold00021 103733 1 C T - ReadM SNP 0005.scaffold00021 103804 1 G C - Both SNP 0005.scaffold00021 103982 1 A T scaffold6787 Both SNP 0005.scaffold00021 104023 1 G C scaffold6787 ReadM SNP 0005.scaffold00021 104146 1 A C - ReadM SNP 0005.scaffold00021 104484 1 C T - ReadM SNP 0005.scaffold00021 104573 1 C T - ReadM SNP 0005.scaffold00021 104585 1 A G - ReadM SNP 0005.scaffold00021 104652 1 A G - ReadM SNP 0005.scaffold00021 105049 1 T C - ReadM SNP 0005.scaffold00021 105077 1 C T - ReadM SNP 0005.scaffold00021 105243 1 A T - ReadM SNP 0005.scaffold00021 105449 1 T G - ReadM SNP 0005.scaffold00021 105559 1 A G - ScafM INDEL 0005.scaffold00021 105656 4 .... TGAC scaffold6787 ScafM INDEL 0005.scaffold00021 105658 4 .... TCTG scaffold6787 ScafM SNP 0005.scaffold00021 105664 1 T C scaffold6787 ReadM SNP 0005.scaffold00021 106352 1 C T - ReadM INDEL 0005.scaffold00021 106428 1 T . - ReadM SNP 0005.scaffold00021 106447 1 C A - ReadM SNP 0005.scaffold00021 106547 1 A G - ReadM SNP 0005.scaffold00021 106721 1 T C - ReadM SNP 0005.scaffold00021 106771 1 C T - ReadM SNP 0005.scaffold00021 106852 1 G A - ReadM SNP 0005.scaffold00021 106984 1 T G - ReadM SNP 0005.scaffold00021 106988 1 A G - ReadM SNP 0005.scaffold00021 107134 1 G A - ReadM SNP 0005.scaffold00021 107255 1 T G - Both SNP 0005.scaffold00021 107431 1 G C scaffold6787 Both SNP 0005.scaffold00021 107606 1 A G scaffold6787 Both SNP 0005.scaffold00021 107827 1 C T scaffold6787 ReadM SNP 0005.scaffold00021 108178 1 T G - ReadM SNP 0005.scaffold00021 108406 1 A C - ReadM SNP 0005.scaffold00021 108473 1 C T - ReadM SNP 0005.scaffold00021 108876 1 T C - Both SNP 0005.scaffold00021 108944 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 108951 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 108972 1 G T scaffold6787 Both SNP 0005.scaffold00021 109249 1 T C scaffold6787 Both SNP 0005.scaffold00021 109559 1 A G scaffold6787 Both SNP 0005.scaffold00021 109693 1 T C scaffold6787 Both SNP 0005.scaffold00021 109695 1 T C scaffold6787 Both SNP 0005.scaffold00021 109792 1 C T scaffold6787 Both SNP 0005.scaffold00021 109978 1 A G scaffold6787 ScafM INDEL 0005.scaffold00021 110359 4 .... AAAA scaffold6787 ScafM SNP 0005.scaffold00021 110385 1 T C scaffold6787 ScafM INDEL 0005.scaffold00021 110423 5 ..... AATAA scaffold6787 ReadM SNP 0005.scaffold00021 110668 1 C T - Both SNP 0005.scaffold00021 111027 1 T G scaffold6787 Both SNP 0005.scaffold00021 111353 1 C A scaffold6787 Both SNP 0005.scaffold00021 111477 1 T C scaffold6787 Both SNP 0005.scaffold00021 111498 1 T C scaffold6787 Both SNP 0005.scaffold00021 111544 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 111689 1 T G scaffold6787 Both SNP 0005.scaffold00021 111965 1 C G scaffold6787 ReadM SNP 0005.scaffold00021 112213 1 G T - Both SNP 0005.scaffold00021 112480 1 A G scaffold6787 Both SNP 0005.scaffold00021 112617 1 A T scaffold6787 Both INDEL 0005.scaffold00021 112980 1 . A scaffold6787 Both SNP 0005.scaffold00021 113175 1 T C scaffold6787 ScafM INDEL 0005.scaffold00021 113353 19 ................... AGATGGACAAAAAAGCAAA scaffold6787 Both SNP 0005.scaffold00021 113566 1 A G scaffold6787 Both SNP 0005.scaffold00021 113690 1 T C scaffold6787 ScafM INDEL 0005.scaffold00021 113715 1 A . scaffold6787 Both SNP 0005.scaffold00021 114415 1 T C scaffold6787 ScafM SNP 0005.scaffold00021 114514 1 A T scaffold6787 ScafM SNP 0005.scaffold00021 114889 1 C T scaffold6787 ReadM SNP 0005.scaffold00021 115416 1 T C - Both SNP 0005.scaffold00021 115624 1 T A scaffold6787 ReadM SNP 0005.scaffold00021 116282 1 C A - ReadM SNP 0005.scaffold00021 116598 1 A G - ReadM SNP 0005.scaffold00021 116652 1 T A - Both SNP 0005.scaffold00021 116756 1 C A scaffold6787 Both SNP 0005.scaffold00021 116806 1 G A scaffold6787 Both SNP 0005.scaffold00021 116922 1 T A scaffold6787 Both SNP 0005.scaffold00021 116991 1 T C scaffold6787 Both SNP 0005.scaffold00021 117000 1 C A scaffold6787 ScafM SNP 0005.scaffold00021 117027 1 C T scaffold6787 Both SNP 0005.scaffold00021 117305 1 G T scaffold6787 Both SNP 0005.scaffold00021 117456 1 T C scaffold6787 Both SNP 0005.scaffold00021 117510 1 C G scaffold6787 ReadM SNP 0005.scaffold00021 117676 1 A C - ReadM SNP 0005.scaffold00021 117694 1 G A - ReadM SNP 0005.scaffold00021 118611 1 T C - Both SNP 0005.scaffold00021 118977 1 C T scaffold6787 ScafM INDEL 0005.scaffold00021 119083 10 AAAATTATGA .......... scaffold6787 ScafM SNP 0005.scaffold00021 119120 1 G A scaffold6787 Both SNP 0005.scaffold00021 119173 1 A T scaffold6787 Both SNP 0005.scaffold00021 119183 1 T G scaffold6787 ReadM SNP 0005.scaffold00021 119298 1 T A - Both SNP 0005.scaffold00021 119752 1 C G scaffold6787 Both SNP 0005.scaffold00021 120040 1 A T scaffold6787 ScafM SNP 0005.scaffold00021 120204 1 A G scaffold6787 Both SNP 0005.scaffold00021 120699 1 A G scaffold6787 Both SNP 0005.scaffold00021 120731 1 G A scaffold6787 Both SNP 0005.scaffold00021 120770 1 T C scaffold6787 Both SNP 0005.scaffold00021 120786 1 A T scaffold6787 Both SNP 0005.scaffold00021 120795 1 G T scaffold6787 Both SNP 0005.scaffold00021 120980 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 121044 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 121071 1 A G scaffold6787 ScafM SNP 0005.scaffold00021 121092 1 A C scaffold6787 ScafM SNP 0005.scaffold00021 121100 1 G A scaffold6787 ScafM SNP 0005.scaffold00021 121141 1 T A scaffold6787 ScafM SNP 0005.scaffold00021 121162 3 AAC GTA scaffold6787 ScafM SNP 0005.scaffold00021 121175 1 T C scaffold6787 Both SNP 0005.scaffold00021 121247 1 T C scaffold6787 Both SNP 0005.scaffold00021 121257 1 C T scaffold6787 Both SNP 0005.scaffold00021 121295 1 C A scaffold6787 Both INDEL 0005.scaffold00021 121411 1 . G scaffold6787 Both SNP 0005.scaffold00021 121488 1 G A scaffold6787 ScafM SNP 0005.scaffold00021 121514 1 C G scaffold6787 ScafM SNP 0005.scaffold00021 121516 1 G A scaffold6787 ScafM SNP 0005.scaffold00021 121594 1 A C scaffold6787 ScafM INDEL 0005.scaffold00021 121602 2 .. GT scaffold6787 ScafM INDEL 0005.scaffold00021 121629 50 TTCACCAAAAAAAAAAAGTTCACCAAAAAAAAAAAAAAGAGAGAGTGGAG .................................................. scaffold6787 ScafM SNP 0005.scaffold00021 121693 1 A C scaffold6787 Both SNP 0005.scaffold00021 121725 1 A C scaffold6787 ScafM INDEL 0005.scaffold00021 121921 8 ........ CACTCCTA scaffold6787 ScafM INDEL 0005.scaffold00021 121949 1 T . scaffold6787 ScafM SNP 0005.scaffold00021 121967 1 C G scaffold6787 ReadM SNP 0005.scaffold00021 125806 1 G C - ReadM SNP 0005.scaffold00021 125963 1 T C - ReadM SNP 0005.scaffold00021 125971 1 A G - ReadM INDEL 0005.scaffold00021 126303 1 . T - ReadM INDEL 0005.scaffold00021 129136 1 C . - ReadM SNP 0005.scaffold00021 129162 1 T C - ReadM SNP 0005.scaffold00021 129524 1 T C - ReadM SNP 0005.scaffold00021 129627 1 G A - ReadM SNP 0005.scaffold00021 129865 1 G C - ReadM SNP 0005.scaffold00021 129967 1 G T - ReadM SNP 0005.scaffold00021 130436 1 A C - ReadM SNP 0005.scaffold00021 130504 1 A G - ReadM INDEL 0005.scaffold00021 130707 1 . T - ReadM SNP 0005.scaffold00021 131028 1 A G - ReadM SNP 0005.scaffold00021 131030 1 C T - ReadM SNP 0005.scaffold00021 131079 1 C T - ReadM SNP 0005.scaffold00021 131154 1 C T - ReadM SNP 0005.scaffold00021 131318 1 G A - ReadM SNP 0005.scaffold00021 131424 1 C T - ReadM SNP 0005.scaffold00021 131505 1 G T - ReadM SNP 0005.scaffold00021 132084 1 A G - ReadM SNP 0005.scaffold00021 132374 1 A G - ReadM SNP 0005.scaffold00021 132486 1 A G - ReadM SNP 0005.scaffold00021 132571 1 A G - ReadM SNP 0005.scaffold00021 132889 1 G A - ReadM SNP 0005.scaffold00021 132913 1 T C - ReadM SNP 0005.scaffold00021 133003 1 A T - ReadM SNP 0005.scaffold00021 133129 1 C G - ReadM SNP 0005.scaffold00021 133424 1 T C - ReadM SNP 0005.scaffold00021 133453 1 C T - ReadM SNP 0005.scaffold00021 133571 1 A T - ReadM SNP 0005.scaffold00021 133586 1 C T - ReadM SNP 0005.scaffold00021 133602 1 G T - ReadM SNP 0005.scaffold00021 133688 1 C G - ReadM SNP 0005.scaffold00021 133693 1 C A - ReadM SNP 0005.scaffold00021 133738 1 G C - ReadM SNP 0005.scaffold00021 133914 1 G A - ReadM SNP 0005.scaffold00021 133941 1 T C - ReadM SNP 0005.scaffold00021 134027 1 A G - ReadM INDEL 0005.scaffold00021 134307 1 G . - ReadM SNP 0005.scaffold00021 134372 1 A G - ReadM SNP 0005.scaffold00021 134430 1 C G - ReadM SNP 0005.scaffold00021 134505 1 G A - ReadM SNP 0005.scaffold00021 134561 1 C T - ReadM SNP 0005.scaffold00021 134610 1 G A - ReadM SNP 0005.scaffold00021 134630 1 G A - ReadM SNP 0005.scaffold00021 134830 1 C T - ReadM SNP 0005.scaffold00021 135405 1 A T - ReadM SNP 0005.scaffold00021 135462 1 A G - ReadM SNP 0005.scaffold00021 135740 1 T A - ReadM SNP 0005.scaffold00021 135825 1 A G - ReadM SNP 0005.scaffold00021 135887 1 C T - ReadM SNP 0005.scaffold00021 136282 1 C A - ReadM SNP 0005.scaffold00021 136439 1 C T - ReadM SNP 0005.scaffold00021 136569 1 C A - ReadM SNP 0005.scaffold00021 136579 1 T C - ReadM SNP 0005.scaffold00021 136626 1 A G - ReadM SNP 0005.scaffold00021 136766 1 G A - ReadM SNP 0005.scaffold00021 136830 1 A G - ReadM SNP 0005.scaffold00021 136878 1 G T - ReadM SNP 0005.scaffold00021 136894 1 G A - ReadM SNP 0005.scaffold00021 136939 1 C A - ReadM SNP 0005.scaffold00021 137016 1 C G - ReadM SNP 0005.scaffold00021 137071 1 T C - ReadM SNP 0005.scaffold00021 137089 1 T C - ReadM SNP 0005.scaffold00021 137164 1 G C - ReadM SNP 0005.scaffold00021 137446 1 T C - ReadM SNP 0005.scaffold00021 137837 1 C T - ReadM SNP 0005.scaffold00021 137839 1 A G - ReadM SNP 0005.scaffold00021 138115 1 T C - ReadM INDEL 0005.scaffold00021 138171 1 . C - ReadM SNP 0005.scaffold00021 138784 1 A C - ReadM SNP 0005.scaffold00021 138879 1 A T - ReadM INDEL 0005.scaffold00021 139327 1 A . - ReadM SNP 0005.scaffold00021 139431 1 A T - ReadM SNP 0005.scaffold00021 139484 1 G T - ReadM SNP 0005.scaffold00021 139710 1 T A - ReadM SNP 0005.scaffold00021 139798 1 A C - ReadM SNP 0005.scaffold00021 139816 1 G A - ReadM SNP 0005.scaffold00021 139983 1 G A - ReadM SNP 0005.scaffold00021 140221 1 A G - ReadM SNP 0005.scaffold00021 140227 1 A G - ReadM SNP 0005.scaffold00021 140240 1 A T - ReadM SNP 0005.scaffold00021 140536 1 C T - ReadM SNP 0005.scaffold00021 140734 1 A G - ReadM SNP 0005.scaffold00021 140761 1 T C - ReadM SNP 0005.scaffold00021 140852 1 C T - ReadM SNP 0005.scaffold00021 140966 1 G T - ReadM SNP 0005.scaffold00021 141152 1 A G - ReadM SNP 0005.scaffold00021 141285 1 A G - ReadM SNP 0005.scaffold00021 141364 1 G A - ReadM SNP 0005.scaffold00021 141468 1 C T - ReadM SNP 0005.scaffold00021 141625 1 G A - ReadM SNP 0005.scaffold00021 141634 1 G A - ReadM SNP 0005.scaffold00021 141715 1 G A - ReadM SNP 0005.scaffold00021 141749 1 T C - ReadM SNP 0005.scaffold00021 141802 1 C T - ReadM SNP 0005.scaffold00021 141910 1 G A - ReadM SNP 0005.scaffold00021 142058 1 A G - ReadM SNP 0005.scaffold00021 142395 1 A G - ReadM SNP 0005.scaffold00021 142543 1 C A - ReadM INDEL 0005.scaffold00021 142661 1 C . - ReadM SNP 0005.scaffold00021 142726 1 C G - ReadM SNP 0005.scaffold00021 142776 1 A G - ReadM SNP 0005.scaffold00021 142834 1 T C - ReadM SNP 0005.scaffold00021 142841 1 G T - ReadM SNP 0005.scaffold00021 142880 1 T G - ReadM SNP 0005.scaffold00021 142886 1 T C - ReadM SNP 0005.scaffold00021 142985 1 T C - ReadM SNP 0005.scaffold00021 143060 1 A T - ReadM SNP 0005.scaffold00021 143434 1 T A - ReadM SNP 0005.scaffold00021 143473 1 T C - ReadM SNP 0005.scaffold00021 143904 1 C T - ReadM SNP 0005.scaffold00021 143920 1 C T - ReadM SNP 0005.scaffold00021 143944 1 T C - ReadM SNP 0005.scaffold00021 144498 1 A G - ReadM SNP 0005.scaffold00021 144539 1 A G - ReadM SNP 0005.scaffold00021 144571 1 C G - ReadM SNP 0005.scaffold00021 144633 1 G A - ReadM SNP 0005.scaffold00021 144725 1 T C - ReadM SNP 0005.scaffold00021 144752 1 C T - ReadM SNP 0005.scaffold00021 144774 1 C T - ReadM SNP 0005.scaffold00021 144822 1 A C - Both SNP 0005.scaffold00021 145220 1 A G scaffold15865 Both SNP 0005.scaffold00021 145223 1 T C scaffold15865 Both SNP 0005.scaffold00021 145246 1 C T scaffold15865 ScafM SNP 0005.scaffold00021 145320 1 T A scaffold15865 ScafM INDEL 0005.scaffold00021 145325 3 AAA ... scaffold15865 ScafM SNP 0005.scaffold00021 145351 1 A G scaffold15865 ScafM SNP 0005.scaffold00021 146933 1 A G scaffold40291 ScafM SNP 0005.scaffold00021 147192 1 A G scaffold40291 ScafM SNP 0005.scaffold00021 147208 1 G A scaffold40291 ScafM SNP 0005.scaffold00021 147322 1 A C scaffold40291 ScafM SNP 0005.scaffold00021 147374 1 T G scaffold40291 ReadM SNP 0005.scaffold00021 147541 1 C T - ReadM SNP 0005.scaffold00021 147873 1 T C - ReadM SNP 0005.scaffold00021 148052 1 T C - ReadM SNP 0005.scaffold00021 148107 1 G A - ReadM SNP 0005.scaffold00021 148147 1 G A - ReadM SNP 0005.scaffold00021 148266 1 T C - ReadM SNP 0005.scaffold00021 148494 1 G A - ReadM INDEL 0005.scaffold00021 148660 1 . A - ReadM SNP 0005.scaffold00021 148879 1 T C - ReadM SNP 0005.scaffold00021 150400 1 A C - ReadM SNP 0005.scaffold00021 150539 1 A G - ReadM SNP 0005.scaffold00021 150570 1 C T - ReadM SNP 0005.scaffold00021 150692 1 G C - ReadM SNP 0005.scaffold00021 150830 1 A G - ReadM SNP 0005.scaffold00021 158296 1 C A - ReadM SNP 0005.scaffold00021 158393 1 C T - ReadM SNP 0005.scaffold00021 158426 1 A G - ReadM SNP 0005.scaffold00021 158491 1 A G - ReadM SNP 0005.scaffold00021 158593 1 T C - ReadM SNP 0005.scaffold00021 158712 1 T C - ReadM SNP 0005.scaffold00021 158717 1 C T - ReadM SNP 0005.scaffold00021 158862 1 A G - ReadM SNP 0005.scaffold00021 159029 1 C A - ReadM SNP 0005.scaffold00021 159217 1 G A - ReadM SNP 0005.scaffold00021 159223 1 A T - Both SNP 0005.scaffold00021 159302 1 C T scaffold11244 Both SNP 0005.scaffold00021 159355 1 T C scaffold11244 ReadM SNP 0005.scaffold00021 159432 1 G T - ReadM SNP 0005.scaffold00021 159710 1 A T - ReadM SNP 0005.scaffold00021 159869 1 C T - ReadM SNP 0005.scaffold00021 159896 1 C T - ReadM SNP 0005.scaffold00021 159909 1 G A - ReadM SNP 0005.scaffold00021 160234 1 G A - ReadM SNP 0005.scaffold00021 160237 1 C T - ReadM SNP 0005.scaffold00021 160368 1 T A - ReadM SNP 0005.scaffold00021 160652 1 A G - ReadM SNP 0005.scaffold00021 160807 1 T C - ReadM SNP 0005.scaffold00021 160878 1 A G - ReadM SNP 0005.scaffold00021 160883 1 C T - Both SNP 0005.scaffold00021 161037 1 C T scaffold11244 ScafM SNP 0005.scaffold00021 161088 1 T C scaffold11244 Both SNP 0005.scaffold00021 161171 1 C T scaffold11244 Both SNP 0005.scaffold00021 161173 1 A G scaffold11244 ReadM SNP 0005.scaffold00021 161291 1 A G - ReadM SNP 0005.scaffold00021 161304 1 T C - ScafM SNP 0005.scaffold00021 161357 1 C T scaffold11244 ScafM SNP 0005.scaffold00021 161361 1 T G scaffold11244 Both SNP 0005.scaffold00021 161411 1 G A scaffold11244 Both SNP 0005.scaffold00021 161417 1 G A scaffold11244 Both SNP 0005.scaffold00021 161526 1 C T scaffold11244 Both SNP 0005.scaffold00021 161603 1 C T scaffold11244 Both SNP 0005.scaffold00021 161716 1 A G scaffold11244 Both SNP 0005.scaffold00021 161858 1 G T scaffold11244 ReadM SNP 0005.scaffold00021 162651 1 A G - ReadM SNP 0005.scaffold00021 162728 1 G C - ReadM SNP 0005.scaffold00021 162822 1 T A - ReadM SNP 0005.scaffold00021 162884 1 C A - ReadM SNP 0005.scaffold00021 162945 1 C T - ReadM SNP 0005.scaffold00021 162986 1 G A - ReadM SNP 0005.scaffold00021 163098 1 G A - ReadM SNP 0005.scaffold00021 163162 1 C T - ReadM SNP 0005.scaffold00021 163228 1 T C - ReadM SNP 0005.scaffold00021 163559 1 T A - ReadM SNP 0005.scaffold00021 163585 1 T G - ReadM SNP 0005.scaffold00021 163637 1 A T - ReadM SNP 0005.scaffold00021 163647 1 A C - ReadM SNP 0005.scaffold00021 163664 1 G C - ReadM SNP 0005.scaffold00021 163774 1 T C - ReadM SNP 0005.scaffold00021 163936 1 A G - ReadM SNP 0005.scaffold00021 164284 1 A G - ReadM SNP 0005.scaffold00021 164301 1 C T - ReadM SNP 0005.scaffold00021 164606 1 G A - ReadM SNP 0005.scaffold00021 164982 1 C T - ReadM SNP 0005.scaffold00021 165263 1 G T - Both SNP 0005.scaffold00021 165508 1 T C scaffold11244 Both SNP 0005.scaffold00021 165512 1 A G scaffold11244 Both SNP 0005.scaffold00021 165574 1 A G scaffold11244 ScafM SNP 0005.scaffold00021 165640 1 C G scaffold11244 ScafM SNP 0005.scaffold00021 165642 1 C T scaffold11244 ScafM SNP 0005.scaffold00021 165644 1 T C scaffold11244 ScafM SNP 0005.scaffold00021 165688 2 GT AC scaffold11244 ScafM SNP 0005.scaffold00021 165828 1 G A scaffold11244 ScafM SNP 0005.scaffold00021 165837 1 T C scaffold11244 ScafM SNP 0005.scaffold00021 165844 1 T G scaffold11244 ScafM SNP 0005.scaffold00021 165855 2 CA AT scaffold11244 ScafM SNP 0005.scaffold00021 165866 1 T C scaffold11244 ScafM SNP 0005.scaffold00021 165868 1 T C scaffold11244 ReadM SNP 0005.scaffold00021 166033 1 G T - ReadM SNP 0005.scaffold00021 166088 1 A G - ReadM SNP 0005.scaffold00021 166097 1 T C - ReadM SNP 0005.scaffold00021 166140 1 C T - ReadM SNP 0005.scaffold00021 166570 1 T A - ReadM SNP 0005.scaffold00021 166577 1 T C - ReadM SNP 0005.scaffold00021 166624 1 T C - ReadM SNP 0005.scaffold00021 167045 1 C T - ReadM SNP 0005.scaffold00021 167049 1 C T - ReadM SNP 0005.scaffold00021 167099 1 A C - ReadM SNP 0005.scaffold00021 167370 1 T G - ReadM SNP 0005.scaffold00021 167439 1 T C - ReadM SNP 0005.scaffold00021 168009 1 G T - ReadM SNP 0005.scaffold00021 168781 1 G A - ReadM SNP 0005.scaffold00021 168883 1 T C - ReadM SNP 0005.scaffold00021 169017 1 G T - ReadM SNP 0005.scaffold00021 169421 1 T C - ReadM SNP 0005.scaffold00021 169441 1 T C - ReadM SNP 0005.scaffold00021 169820 1 C A - ReadM SNP 0005.scaffold00021 170402 1 A G - ReadM SNP 0005.scaffold00021 170492 1 T C - ReadM SNP 0005.scaffold00021 170575 1 A G - ReadM SNP 0005.scaffold00021 173578 1 G C - ReadM SNP 0005.scaffold00021 173740 1 C A - ReadM SNP 0005.scaffold00021 174435 1 T G - ReadM SNP 0005.scaffold00021 174453 1 G C - ReadM SNP 0005.scaffold00021 186548 1 A G - ReadM SNP 0005.scaffold00021 186566 1 G A - ReadM SNP 0005.scaffold00021 186605 1 G A - ReadM SNP 0005.scaffold00021 186988 1 A T - ReadM SNP 0005.scaffold00021 186996 1 T C - ReadM SNP 0005.scaffold00021 187082 1 G A - ReadM SNP 0005.scaffold00021 187168 1 G C - ReadM SNP 0005.scaffold00021 187349 1 T C - ReadM INDEL 0005.scaffold00021 187369 1 . G - ReadM SNP 0005.scaffold00021 187453 1 C T - ReadM SNP 0005.scaffold00021 187517 1 A G - ReadM SNP 0005.scaffold00021 187525 1 A G - ReadM SNP 0005.scaffold00021 189978 1 G A - ReadM SNP 0005.scaffold00021 190203 1 A G - ReadM SNP 0005.scaffold00021 190211 1 G A - ReadM SNP 0005.scaffold00021 190243 1 C T - ReadM SNP 0005.scaffold00021 190283 1 A G - ReadM SNP 0005.scaffold00021 190326 1 A G - ReadM SNP 0005.scaffold00021 190505 1 C A - ReadM SNP 0005.scaffold00021 190540 1 C G - ReadM SNP 0005.scaffold00021 190542 1 T A - ReadM SNP 0005.scaffold00021 190668 1 T C - ReadM SNP 0005.scaffold00021 190718 1 C G - ReadM SNP 0005.scaffold00021 191030 1 A T - ReadM SNP 0005.scaffold00021 191059 1 A G - ReadM SNP 0005.scaffold00021 191226 1 C G - ReadM SNP 0005.scaffold00021 191238 1 T C - ReadM SNP 0005.scaffold00021 191326 1 G A - ReadM INDEL 0005.scaffold00021 191340 1 T . - ReadM SNP 0005.scaffold00021 191416 1 T C - ReadM SNP 0005.scaffold00021 191463 1 C T - ReadM SNP 0005.scaffold00021 191560 1 G C - ReadM SNP 0005.scaffold00021 191651 1 T G - ReadM SNP 0005.scaffold00021 191760 1 T C - ReadM SNP 0005.scaffold00021 191771 1 A G - ReadM SNP 0005.scaffold00021 191843 1 T C - ReadM INDEL 0005.scaffold00021 191906 1 T . - ReadM SNP 0005.scaffold00021 191927 1 T G - ReadM SNP 0005.scaffold00021 191959 1 C G - ReadM SNP 0005.scaffold00021 192000 1 A G - ReadM SNP 0005.scaffold00021 192047 1 G A - ReadM SNP 0005.scaffold00021 192054 1 G A - ReadM SNP 0005.scaffold00021 192122 1 A C - ReadM SNP 0005.scaffold00021 192246 1 G T - ReadM SNP 0005.scaffold00021 192328 1 C G - ReadM INDEL 0005.scaffold00021 194019 1 . A - ReadM SNP 0005.scaffold00021 194372 1 A T - ReadM SNP 0005.scaffold00021 194556 1 A T - ReadM SNP 0005.scaffold00021 194622 1 G A - ReadM SNP 0005.scaffold00021 194813 1 T C - ReadM SNP 0005.scaffold00021 194903 1 T A - ReadM SNP 0005.scaffold00021 195191 1 C T - ReadM SNP 0005.scaffold00021 195287 1 G T - ReadM SNP 0005.scaffold00021 195330 1 C T - ReadM SNP 0005.scaffold00021 195639 1 A T - ReadM SNP 0005.scaffold00021 195698 1 G T - ReadM SNP 0005.scaffold00021 195726 1 C T - ReadM SNP 0005.scaffold00021 196065 1 A G - ReadM SNP 0005.scaffold00021 196115 1 C T - ReadM SNP 0005.scaffold00021 196268 1 A G - ReadM SNP 0005.scaffold00021 196302 1 C A - ReadM SNP 0005.scaffold00021 196417 1 T C - ReadM SNP 0005.scaffold00021 196428 1 G A - ReadM INDEL 0005.scaffold00021 196606 1 . C - ReadM SNP 0005.scaffold00021 196847 1 T C - ReadM SNP 0005.scaffold00021 196969 1 A T - ReadM SNP 0005.scaffold00021 197227 1 T C - ReadM SNP 0005.scaffold00021 197246 1 G A - ReadM SNP 0005.scaffold00021 197458 1 G T - ReadM SNP 0005.scaffold00021 197572 1 C A - ReadM SNP 0005.scaffold00021 197586 1 T C - ReadM SNP 0005.scaffold00021 197689 1 T C - ReadM SNP 0005.scaffold00021 197875 1 G A - ReadM SNP 0005.scaffold00021 197965 1 G T - ReadM SNP 0005.scaffold00021 198183 1 G A - ReadM INDEL 0005.scaffold00021 198199 1 T . - ReadM SNP 0005.scaffold00021 198205 1 A G - ReadM INDEL 0005.scaffold00021 198370 1 . G - ReadM SNP 0005.scaffold00021 198430 1 A G - ReadM INDEL 0005.scaffold00021 198473 1 C . - ReadM SNP 0005.scaffold00021 198497 1 G C - ReadM SNP 0005.scaffold00021 198538 1 T C - ReadM SNP 0005.scaffold00021 198565 1 C A - ReadM SNP 0005.scaffold00021 198818 1 C T - ReadM SNP 0005.scaffold00021 198912 1 T A - ReadM SNP 0005.scaffold00021 199396 1 T C - ReadM SNP 0005.scaffold00021 199408 1 C T - ReadM SNP 0005.scaffold00021 199668 1 T C - ReadM SNP 0005.scaffold00021 199808 1 T A - Both SNP 0005.scaffold00021 199893 1 T G scaffold13731 Both SNP 0005.scaffold00021 199935 1 C A scaffold13731 ReadM SNP 0005.scaffold00021 200200 1 C T - ReadM SNP 0005.scaffold00021 200206 1 A G - ReadM SNP 0005.scaffold00021 200281 1 A T - ReadM SNP 0005.scaffold00021 200384 1 C A - ReadM SNP 0005.scaffold00021 200418 1 T C - ReadM SNP 0005.scaffold00021 200526 1 G A - ReadM SNP 0005.scaffold00021 200547 1 T G - ReadM SNP 0005.scaffold00021 200595 1 C A - ReadM SNP 0005.scaffold00021 200660 1 C A - ReadM SNP 0005.scaffold00021 200802 1 T C - ReadM SNP 0005.scaffold00021 200954 1 G A - ReadM SNP 0005.scaffold00021 201016 1 T C - ReadM SNP 0005.scaffold00021 201076 1 A T - ReadM SNP 0005.scaffold00021 201221 1 C T - ReadM SNP 0005.scaffold00021 201287 1 A T - ReadM SNP 0005.scaffold00021 201471 1 A G - ReadM SNP 0005.scaffold00021 201655 1 A T - ReadM SNP 0005.scaffold00021 201714 1 C T - ScafM SNP 0005.scaffold00021 201971 1 C A scaffold13731 ScafM SNP 0005.scaffold00021 201982 1 C T scaffold13731 ScafM SNP 0005.scaffold00021 202043 1 C G scaffold13731 ScafM INDEL 0005.scaffold00021 202728 1 . G scaffold22438 ScafM SNP 0005.scaffold00021 202793 1 A G scaffold22438 ScafM SNP 0005.scaffold00021 202802 1 A C scaffold22438 ScafM SNP 0005.scaffold00021 202818 1 C A scaffold22438 ScafM SNP 0005.scaffold00021 202873 1 G A scaffold22438 ScafM SNP 0005.scaffold00021 202997 1 A G scaffold22438 ScafM SNP 0005.scaffold00021 203031 1 C A scaffold22438 ScafM INDEL 0005.scaffold00021 203045 1 C . scaffold22438 ReadM INDEL 0005.scaffold00021 203084 1 . A - ScafM INDEL 0005.scaffold00021 203278 3 ... TTG scaffold7461 Both SNP 0005.scaffold00021 203426 1 G A scaffold7461 Both SNP 0005.scaffold00021 203449 1 G C scaffold7461 Both SNP 0005.scaffold00021 203557 1 A G scaffold7461 ScafM SNP 0005.scaffold00021 203603 1 C T scaffold7461 ScafM INDEL 0005.scaffold00021 203616 1 . T scaffold7461 ReadM SNP 0005.scaffold00021 204598 1 G A - ReadM SNP 0005.scaffold00021 204629 1 G C - ReadM SNP 0005.scaffold00021 204658 1 T C - ReadM SNP 0005.scaffold00021 204724 1 G A - ReadM INDEL 0005.scaffold00021 204727 1 G . - ReadM SNP 0005.scaffold00021 204811 1 T C - ReadM SNP 0005.scaffold00021 204880 1 G A - ReadM SNP 0005.scaffold00021 205070 1 G A - ScafM SNP 0005.scaffold00021 206418 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 206439 1 G A scaffold7461 ReadM SNP 0005.scaffold00021 206657 1 T C - ReadM SNP 0005.scaffold00021 206744 1 C T - ReadM SNP 0005.scaffold00021 206868 1 C A - ReadM SNP 0005.scaffold00021 206936 1 C T - ReadM SNP 0005.scaffold00021 207162 1 T C - ReadM SNP 0005.scaffold00021 207250 1 T A - ReadM SNP 0005.scaffold00021 207362 1 C A - ReadM SNP 0005.scaffold00021 207412 1 C T - ReadM SNP 0005.scaffold00021 207414 1 G A - ReadM SNP 0005.scaffold00021 207424 1 C A - ReadM SNP 0005.scaffold00021 207478 1 A G - ReadM SNP 0005.scaffold00021 207617 1 T G - ReadM SNP 0005.scaffold00021 207968 1 T G - ReadM SNP 0005.scaffold00021 208005 1 C T - ReadM SNP 0005.scaffold00021 208060 1 A G - ReadM SNP 0005.scaffold00021 208332 1 T A - ReadM SNP 0005.scaffold00021 208383 1 T C - Both SNP 0005.scaffold00021 208453 1 G C scaffold7461 ReadM SNP 0005.scaffold00021 209434 1 T G - ReadM SNP 0005.scaffold00021 209556 1 T C - ReadM SNP 0005.scaffold00021 209610 1 C G - ScafM SNP 0005.scaffold00021 209774 1 C T scaffold7461 ReadM SNP 0005.scaffold00021 209830 1 C T - ReadM SNP 0005.scaffold00021 209898 1 A G - ScafM SNP 0005.scaffold00021 209920 1 A G scaffold7461 Both SNP 0005.scaffold00021 209942 1 A G scaffold7461 ReadM SNP 0005.scaffold00021 210072 1 C G - ReadM SNP 0005.scaffold00021 210115 1 C T - ReadM SNP 0005.scaffold00021 210153 1 T A - ReadM SNP 0005.scaffold00021 210304 1 A G - ReadM SNP 0005.scaffold00021 210439 1 T A - ReadM SNP 0005.scaffold00021 210501 1 A G - ReadM SNP 0005.scaffold00021 210528 1 A G - ReadM SNP 0005.scaffold00021 210594 1 T C - ReadM SNP 0005.scaffold00021 210607 1 A G - ReadM SNP 0005.scaffold00021 210841 1 G A - ReadM SNP 0005.scaffold00021 210862 1 T A - ReadM SNP 0005.scaffold00021 210871 1 A C - ReadM SNP 0005.scaffold00021 211021 1 A C - ReadM INDEL 0005.scaffold00021 211150 1 . A - ReadM SNP 0005.scaffold00021 211164 1 T G - ReadM SNP 0005.scaffold00021 211216 1 T C - ReadM SNP 0005.scaffold00021 211234 1 T C - ReadM SNP 0005.scaffold00021 211237 1 A G - ReadM SNP 0005.scaffold00021 211330 1 T A - ReadM SNP 0005.scaffold00021 211458 1 T C - Both SNP 0005.scaffold00021 211548 1 G C scaffold7461 Both INDEL 0005.scaffold00021 211611 1 . A scaffold7461 ReadM SNP 0005.scaffold00021 211683 1 T C - ScafM SNP 0005.scaffold00021 211683 2 TT CA scaffold7461 Both SNP 0005.scaffold00021 211714 1 C A scaffold7461 Both SNP 0005.scaffold00021 211742 1 T C scaffold7461 Both SNP 0005.scaffold00021 211809 1 G T scaffold7461 Both SNP 0005.scaffold00021 212131 1 C T scaffold7461 Both SNP 0005.scaffold00021 212169 1 T C scaffold7461 Both SNP 0005.scaffold00021 212178 1 T C scaffold7461 Both SNP 0005.scaffold00021 212301 1 A C scaffold7461 Both SNP 0005.scaffold00021 212345 1 A G scaffold7461 Both SNP 0005.scaffold00021 212555 1 A C scaffold7461 Both SNP 0005.scaffold00021 212585 1 A G scaffold7461 Both SNP 0005.scaffold00021 212778 1 T G scaffold7461 ScafM SNP 0005.scaffold00021 212931 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 212954 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 213080 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 215156 1 C G scaffold7461 Both SNP 0005.scaffold00021 215291 1 A G scaffold7461 Both SNP 0005.scaffold00021 215392 1 T A scaffold7461 Both INDEL 0005.scaffold00021 215539 1 A . scaffold7461 Both SNP 0005.scaffold00021 215607 1 A C scaffold7461 Both SNP 0005.scaffold00021 215611 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 215726 2 AC GA scaffold7461 ScafM SNP 0005.scaffold00021 215778 1 A T scaffold7461 Both SNP 0005.scaffold00021 216028 1 A C scaffold7461 Both SNP 0005.scaffold00021 216123 1 A T scaffold7461 ScafM INDEL 0005.scaffold00021 216243 4 TATA .... scaffold7461 Both SNP 0005.scaffold00021 216297 1 A T scaffold7461 Both INDEL 0005.scaffold00021 216301 1 T . scaffold7461 ReadM SNP 0005.scaffold00021 216326 1 G A - ReadM SNP 0005.scaffold00021 216448 1 T C - ReadM SNP 0005.scaffold00021 216673 1 G A - ReadM SNP 0005.scaffold00021 216729 1 G C - ReadM SNP 0005.scaffold00021 216931 1 A G - ReadM SNP 0005.scaffold00021 216983 1 G C - ReadM SNP 0005.scaffold00021 217011 1 T A - ReadM SNP 0005.scaffold00021 217258 1 A T - ReadM SNP 0005.scaffold00021 217270 1 C A - ReadM SNP 0005.scaffold00021 217346 1 T A - ReadM SNP 0005.scaffold00021 217365 1 G A - ReadM SNP 0005.scaffold00021 217472 1 A C - ReadM SNP 0005.scaffold00021 217514 1 A C - ReadM SNP 0005.scaffold00021 217672 1 G T - ReadM SNP 0005.scaffold00021 217790 1 C T - ReadM SNP 0005.scaffold00021 217861 1 G T - ReadM SNP 0005.scaffold00021 218135 1 T G - ReadM SNP 0005.scaffold00021 218153 1 T C - ReadM SNP 0005.scaffold00021 218163 1 T A - ReadM SNP 0005.scaffold00021 218271 1 C T - ReadM SNP 0005.scaffold00021 218319 1 T C - ReadM SNP 0005.scaffold00021 218457 1 T A - ReadM SNP 0005.scaffold00021 218512 1 A G - ReadM SNP 0005.scaffold00021 218523 1 C A - ReadM SNP 0005.scaffold00021 218547 1 A T - ReadM SNP 0005.scaffold00021 218685 1 T A - ReadM SNP 0005.scaffold00021 218741 1 T C - ReadM SNP 0005.scaffold00021 219107 1 T C - ReadM SNP 0005.scaffold00021 219154 1 T C - ReadM SNP 0005.scaffold00021 219159 1 C T - ReadM SNP 0005.scaffold00021 219832 1 G A - ReadM SNP 0005.scaffold00021 219928 1 T A - ReadM SNP 0005.scaffold00021 219989 1 G A - ReadM SNP 0005.scaffold00021 220175 1 A G - ReadM SNP 0005.scaffold00021 220272 1 G C - ReadM SNP 0005.scaffold00021 220297 1 T C - ReadM SNP 0005.scaffold00021 220512 1 G A - ReadM SNP 0005.scaffold00021 220687 1 C A - ReadM SNP 0005.scaffold00021 220714 1 C G - ReadM SNP 0005.scaffold00021 220869 1 C T - ReadM SNP 0005.scaffold00021 220957 1 G T - ReadM SNP 0005.scaffold00021 221368 1 T A - ReadM SNP 0005.scaffold00021 221400 1 C T - ReadM SNP 0005.scaffold00021 221404 1 A G - ReadM SNP 0005.scaffold00021 221555 1 T G - ReadM SNP 0005.scaffold00021 221615 1 A C - ReadM SNP 0005.scaffold00021 221714 1 A C - ScafM INDEL 0005.scaffold00021 222727 4 .... CGTG scaffold7461 ReadM SNP 0005.scaffold00021 222804 1 A T - ReadM SNP 0005.scaffold00021 222999 1 C T - Both SNP 0005.scaffold00021 223053 1 G A scaffold7461 Both SNP 0005.scaffold00021 223110 1 C T scaffold7461 Both SNP 0005.scaffold00021 223135 1 G A scaffold7461 Both SNP 0005.scaffold00021 223498 1 C A scaffold7461 Both SNP 0005.scaffold00021 223504 1 G A scaffold7461 Both SNP 0005.scaffold00021 223624 1 A C scaffold7461 Both SNP 0005.scaffold00021 223801 1 C G scaffold7461 ScafM SNP 0005.scaffold00021 224005 1 A T scaffold7461 ReadM SNP 0005.scaffold00021 224253 1 T C - ReadM SNP 0005.scaffold00021 224264 1 C T - ScafM INDEL 0005.scaffold00021 224439 1 C . scaffold7461 Both SNP 0005.scaffold00021 224455 1 C T scaffold7461 ScafM SNP 0005.scaffold00021 224663 1 C G scaffold7461 Both SNP 0005.scaffold00021 224684 1 C A scaffold7461 Both SNP 0005.scaffold00021 224882 1 A T scaffold7461 Both SNP 0005.scaffold00021 225083 1 A G scaffold7461 Both SNP 0005.scaffold00021 225167 1 G C scaffold7461 ScafM SNP 0005.scaffold00021 225483 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 225512 1 A T scaffold7461 ScafM SNP 0005.scaffold00021 225530 1 G C scaffold7461 ScafM SNP 0005.scaffold00021 225548 2 AA CT scaffold7461 ScafM SNP 0005.scaffold00021 225572 1 A G scaffold7461 ScafM SNP 0005.scaffold00021 228596 1 C A scaffold7461 ScafM SNP 0005.scaffold00021 228640 1 C G scaffold7461 ScafM SNP 0005.scaffold00021 228661 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 228801 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 228808 2 TA AC scaffold7461 ScafM SNP 0005.scaffold00021 228814 1 A G scaffold7461 ScafM INDEL 0005.scaffold00021 228829 1 A . scaffold7461 ScafM SNP 0005.scaffold00021 228835 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 228841 1 C G scaffold7461 ScafM SNP 0005.scaffold00021 228864 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 228881 1 C A scaffold7461 ScafM SNP 0005.scaffold00021 228951 1 A G scaffold7461 ScafM SNP 0005.scaffold00021 228986 1 A G scaffold7461 ReadM SNP 0005.scaffold00021 230023 1 A T - ReadM SNP 0005.scaffold00021 230158 1 G A - ScafM SNP 0005.scaffold00021 230524 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 230566 1 T G scaffold7461 ScafM INDEL 0005.scaffold00021 230572 1 . T scaffold7461 ScafM SNP 0005.scaffold00021 230644 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 230712 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 230729 1 A T scaffold7461 ScafM SNP 0005.scaffold00021 230780 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 230782 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 230793 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 230797 1 T A scaffold7461 ScafM INDEL 0005.scaffold00021 230819 1 . T scaffold7461 ScafM SNP 0005.scaffold00021 230827 1 C T scaffold7461 ScafM SNP 0005.scaffold00021 230839 1 G A scaffold7461 ScafM SNP 0005.scaffold00021 230877 1 A T scaffold7461 ScafM SNP 0005.scaffold00021 230965 1 C G scaffold7461 ScafM SNP 0005.scaffold00021 231039 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 231054 1 A G scaffold7461 Both SNP 0005.scaffold00021 231194 1 T A scaffold7461 ScafM SNP 0005.scaffold00021 231349 1 T G scaffold7461 ScafM INDEL 0005.scaffold00021 232477 5 ..... ATAAC scaffold7461 ScafM SNP 0005.scaffold00021 232881 1 C T scaffold7461 ScafM INDEL 0005.scaffold00021 233028 8 AATTATTT ........ scaffold7461 ScafM INDEL 0005.scaffold00021 233150 4 .... AAAA scaffold7461 ScafM SNP 0005.scaffold00021 233152 1 T A scaffold7461 Both SNP 0005.scaffold00021 233292 1 G A scaffold7461 ReadM INDEL 0005.scaffold00021 233992 1 . A - ScafM SNP 0005.scaffold00021 234487 1 T C scaffold7461 ScafM SNP 0005.scaffold00021 234944 1 G A scaffold7461 ScafM INDEL 0005.scaffold00021 235114 3 GTT ... scaffold7461 ScafM INDEL 0005.scaffold00021 235138 1 T . scaffold7461 ScafM INDEL 0005.scaffold00021 235140 1 T . scaffold7461 ScafM INDEL 0005.scaffold00021 235142 1 G . scaffold7461 ScafM SNP 0005.scaffold00021 235144 1 T C scaffold7461 ScafM INDEL 0005.scaffold00021 235147 2 AA .. scaffold7461 ScafM INDEL 0005.scaffold00021 235153 9 ATTTCATTG ......... scaffold7461 ScafM INDEL 0005.scaffold00021 235166 8 GGATAGTG ........ scaffold7461 ScafM SNP 0005.scaffold00021 235265 1 T C scaffold7461 ReadM SNP 0005.scaffold00021 235549 1 G T - ReadM SNP 0005.scaffold00021 235835 1 A C - ScafM SNP 0005.scaffold00021 235875 1 A G scaffold13363 ScafM SNP 0005.scaffold00021 235892 1 T C scaffold13363 ReadM SNP 0005.scaffold00021 235906 1 A C - ScafM SNP 0005.scaffold00021 235938 1 A T scaffold13363 ScafM SNP 0005.scaffold00021 235990 1 T G scaffold13363 ScafM SNP 0005.scaffold00021 235996 1 G C scaffold13363 ReadM SNP 0005.scaffold00021 236446 1 C G - ReadM SNP 0005.scaffold00021 236538 1 C G - ReadM SNP 0005.scaffold00021 236752 1 C T - ScafM SNP 0005.scaffold00021 237597 1 C T scaffold2740 ReadM SNP 0005.scaffold00021 239267 1 A G - ScafM SNP 0005.scaffold00021 239648 1 T C scaffold2740 Both SNP 0005.scaffold00021 239954 1 T C scaffold2740 Both SNP 0005.scaffold00021 240080 1 C A scaffold2740 Both SNP 0005.scaffold00021 240319 1 C T scaffold2740 Both SNP 0005.scaffold00021 240554 1 A G scaffold2740 ReadM SNP 0005.scaffold00021 241645 1 C T - ReadM INDEL 0005.scaffold00021 241812 1 . A - ReadM SNP 0005.scaffold00021 242443 1 T G - ScafM SNP 0005.scaffold00021 243294 1 A G scaffold2740 ScafM SNP 0005.scaffold00021 243322 1 C A scaffold2740 ScafM SNP 0005.scaffold00021 243331 1 T A scaffold2740 ScafM SNP 0005.scaffold00021 243352 1 T G scaffold2740 ScafM SNP 0005.scaffold00021 243389 1 T G scaffold2740 ScafM SNP 0005.scaffold00021 243406 1 T A scaffold2740 ScafM SNP 0005.scaffold00021 243481 1 C A scaffold2740 ReadM SNP 0005.scaffold00021 243759 1 T A - ScafM SNP 0005.scaffold00021 243788 1 G A scaffold2740 ScafM SNP 0005.scaffold00021 243790 1 C T scaffold2740 ScafM SNP 0005.scaffold00021 243796 1 G A scaffold2740 ScafM INDEL 0005.scaffold00021 244156 2 TG .. scaffold2740 Both SNP 0005.scaffold00021 244527 1 T A scaffold2740 Both SNP 0005.scaffold00021 245706 1 T C scaffold2740 Both SNP 0005.scaffold00021 245741 1 A G scaffold2740 Both INDEL 0005.scaffold00021 245751 1 . C scaffold2740 ReadM SNP 0005.scaffold00021 248962 1 G T - ReadM SNP 0005.scaffold00021 249874 1 C G - ReadM SNP 0005.scaffold00021 250140 1 G A - ReadM SNP 0005.scaffold00021 250193 1 T C - ReadM SNP 0005.scaffold00021 252193 1 A G - ReadM SNP 0005.scaffold00021 253353 1 A G - ReadM SNP 0005.scaffold00021 254538 1 T A - ReadM SNP 0005.scaffold00021 257538 1 C T - ReadM SNP 0005.scaffold00021 257784 1 G A - ReadM SNP 0005.scaffold00021 258072 1 G A - ReadM SNP 0005.scaffold00021 258101 1 G A - ReadM SNP 0005.scaffold00021 258357 1 T C - ReadM SNP 0005.scaffold00021 258557 1 C A - ReadM SNP 0005.scaffold00021 258713 1 A C - ReadM SNP 0005.scaffold00021 258922 1 G T - ReadM SNP 0005.scaffold00021 258977 1 C T - ReadM SNP 0005.scaffold00021 259123 1 A C - ReadM SNP 0005.scaffold00021 259252 1 G A - ReadM SNP 0005.scaffold00021 262810 1 C T - ReadM SNP 0005.scaffold00021 262893 1 T A - ReadM SNP 0005.scaffold00021 262909 1 T C - ReadM SNP 0005.scaffold00021 263469 1 T C - ReadM SNP 0005.scaffold00021 263813 1 T C - ReadM SNP 0005.scaffold00021 264050 1 T C - Both SNP 0005.scaffold00021 264178 1 C T scaffold2740 ReadM SNP 0005.scaffold00021 264784 1 G C - ReadM SNP 0005.scaffold00021 264884 1 C T - ReadM INDEL 0005.scaffold00021 265263 1 T . - ReadM SNP 0005.scaffold00021 265283 1 T C - ReadM SNP 0005.scaffold00021 265461 1 A G - ReadM SNP 0005.scaffold00021 265500 1 C A - ReadM SNP 0005.scaffold00021 265629 1 A G - ReadM SNP 0005.scaffold00021 265918 1 C T - ReadM SNP 0005.scaffold00021 266014 1 G T - ReadM SNP 0005.scaffold00021 266194 1 C A - ReadM SNP 0005.scaffold00021 266201 1 A T - ReadM SNP 0005.scaffold00021 266457 1 T C - ReadM SNP 0005.scaffold00021 267012 1 A G - ReadM SNP 0005.scaffold00021 267460 1 T C - ReadM INDEL 0005.scaffold00021 267511 1 . G - ReadM SNP 0005.scaffold00021 267521 1 T G - ReadM SNP 0005.scaffold00021 268069 1 A G - ReadM SNP 0005.scaffold00021 268312 1 C T - Both SNP 0005.scaffold00021 269258 1 A G scaffold2740 Both SNP 0005.scaffold00021 269263 1 T A scaffold2740 ReadM SNP 0005.scaffold00021 269572 1 G A - ReadM SNP 0005.scaffold00021 269591 1 G A - ReadM SNP 0005.scaffold00021 269667 1 T C - Both SNP 0005.scaffold00021 269739 1 T C scaffold2740 ReadM SNP 0005.scaffold00021 269946 1 G A - ReadM SNP 0005.scaffold00021 270023 1 A G - ReadM SNP 0005.scaffold00021 270273 1 C T - ReadM SNP 0005.scaffold00021 270275 1 C G - ReadM SNP 0005.scaffold00021 270483 1 T A - ReadM SNP 0005.scaffold00021 271124 1 A G - ReadM SNP 0005.scaffold00021 271218 1 C T - ReadM SNP 0005.scaffold00021 271551 1 C T - ReadM SNP 0005.scaffold00021 271695 1 C T - ReadM SNP 0005.scaffold00021 272225 1 C T - ReadM SNP 0005.scaffold00021 273367 1 C T - ReadM SNP 0005.scaffold00021 273387 1 G A - ReadM INDEL 0006.scaffold00022 19206 1 . A - ScafM INDEL 0006.scaffold00022 28153 1 . A scaffold17198 ReadM SNP 0007.scaffold00024 7152 1 G A - ScafM INDEL 0007.scaffold00024 14683 27 ........................... TTTATGAGGGAGAGAGAATAAAACTAC scaffold11164 ScafM SNP 0007.scaffold00024 28881 1 G T scaffold9623 ScafM INDEL 0007.scaffold00024 34037 3 ACA ... scaffold9623 ScafM INDEL 0007.scaffold00024 34044 26 TGCATGTTCTGAGTGCAAGCAAAGAA .......................... scaffold9623 ScafM INDEL 0007.scaffold00024 34071 2 TA .. scaffold9623 ScafM INDEL 0007.scaffold00024 34074 7 TATAATT ....... scaffold9623 ScafM INDEL 0007.scaffold00024 34083 9 ATGAAGAAA ......... scaffold9623 ScafM INDEL 0007.scaffold00024 34093 19 GGGGGGGGGGGGGGGGGGT ................... scaffold9623 ScafM INDEL 0007.scaffold00024 34114 1 G . scaffold9623 ScafM INDEL 0007.scaffold00024 46252 1 . A scaffold32351 ScafM SNP 0007.scaffold00024 69360 1 T C scaffold8247 ScafM SNP 0007.scaffold00024 69425 1 C T scaffold8247 ScafM SNP 0007.scaffold00024 69442 1 T C scaffold8247 ScafM SNP 0007.scaffold00024 69492 1 A G scaffold8247 ScafM SNP 0007.scaffold00024 116532 1 C A scaffold20387 ScafM SNP 0007.scaffold00024 116545 1 G T scaffold20387 ScafM SNP 0007.scaffold00024 116553 1 G A scaffold20387 ScafM SNP 0007.scaffold00024 116574 1 T C scaffold20387 ScafM SNP 0007.scaffold00024 116583 1 C G scaffold20387 ScafM SNP 0007.scaffold00024 116591 1 G C scaffold20387 ScafM INDEL 0007.scaffold00024 116616 1 A . scaffold20387 ScafM SNP 0007.scaffold00024 116631 1 C G scaffold20387 ScafM SNP 0007.scaffold00024 116972 1 C G scaffold10140 ScafM SNP 0007.scaffold00024 116981 1 T C scaffold10140 ScafM INDEL 0007.scaffold00024 116998 20 .................... CCAGATTTCGTCCGAGCTGA scaffold10140 ScafM SNP 0007.scaffold00024 128655 1 A C scaffold10140 ScafM SNP 0007.scaffold00024 133279 2 GT CC scaffold10140 ScafM INDEL 0007.scaffold00024 146023 1 . T scaffold10140 ScafM SNP 0007.scaffold00024 153984 1 C T scaffold10140 ScafM SNP 0007.scaffold00024 153996 1 T C scaffold10140 ScafM SNP 0007.scaffold00024 153998 1 G A scaffold10140 ScafM SNP 0007.scaffold00024 168086 1 C A scaffold10908 ScafM SNP 0007.scaffold00024 197858 1 G A scaffold10032 ScafM SNP 0007.scaffold00024 197899 1 G C scaffold10032 ScafM SNP 0007.scaffold00024 197975 1 A G scaffold10032 ScafM SNP 0007.scaffold00024 197985 1 C T scaffold10032 ScafM INDEL 0007.scaffold00024 227828 1 . A scaffold10480 Both INDEL 0007.scaffold00024 235129 1 . C scaffold10480 ScafM INDEL 0007.scaffold00024 237385 1 C . scaffold10480 ScafM INDEL 0007.scaffold00024 237398 1 A . scaffold10480 ScafM SNP 0007.scaffold00024 243753 1 A T scaffold10480 ScafM SNP 0007.scaffold00024 268274 1 A C scaffold10480 ScafM SNP 0007.scaffold00024 269809 1 T C scaffold7647 ScafM SNP 0007.scaffold00024 269863 1 T C scaffold7647 ScafM SNP 0007.scaffold00024 269953 1 C T scaffold7647 ScafM SNP 0007.scaffold00024 270005 1 T C scaffold7647 ScafM SNP 0007.scaffold00024 270035 1 A G scaffold7647 ScafM SNP 0007.scaffold00024 270053 1 T A scaffold7647 ScafM SNP 0007.scaffold00024 270058 2 GG AT scaffold7647 ScafM SNP 0007.scaffold00024 283390 1 T C scaffold32872 ScafM INDEL 0007.scaffold00024 292119 1 . T scaffold40664 ScafM INDEL 0007.scaffold00024 292121 1 . G scaffold40664 ScafM INDEL 0007.scaffold00024 292146 1 . G scaffold40664 ScafM SNP 0007.scaffold00024 292161 2 AG GA scaffold40664 ScafM INDEL 0007.scaffold00024 305621 22 ...................... TATATATATATATATATATATA scaffold17472 ScafM INDEL 0007.scaffold00024 305646 3 ... TTT scaffold17472 ScafM INDEL 0007.scaffold00024 309183 49 AATTCGAGATTGTTGCTAAACAGGGGGGGGGGTGGTTTGGGGGGAAAAA ................................................. scaffold17472 ScafM SNP 0007.scaffold00024 361334 1 G A scaffold14652 ScafM INDEL 0007.scaffold00024 362491 46 .............................................. GAACTTCATAAAAAGAGACAATTTATTTCATTCTGTTGTATGCTCA scaffold14652 ScafM INDEL 0007.scaffold00024 370707 2 .. AG scaffold14652 ScafM INDEL 0007.scaffold00024 391711 11 ........... TAGTTTTTTTT scaffold10960 ScafM SNP 0007.scaffold00024 391715 2 AG TT scaffold10960 ScafM INDEL 0007.scaffold00024 408704 1 . A scaffold10960 ScafM INDEL 0007.scaffold00024 442412 1 . A scaffold6593 ScafM INDEL 0007.scaffold00024 442415 7 ....... AGAAAAC scaffold6593 ScafM INDEL 0007.scaffold00024 442486 1 G . scaffold6593 ScafM SNP 0007.scaffold00024 442514 1 C T scaffold6593 ScafM INDEL 0007.scaffold00024 442531 8 ........ TTAAATCT scaffold6593 ScafM INDEL 0007.scaffold00024 442534 3 ... ATT scaffold6593 ScafM INDEL 0007.scaffold00024 442537 4 .... CCAC scaffold6593 ScafM INDEL 0007.scaffold00024 442563 3 ACA ... scaffold6593 ScafM SNP 0007.scaffold00024 442580 1 T C scaffold6593 Both SNP 0007.scaffold00024 445090 1 A G scaffold28714 ScafM SNP 0007.scaffold00024 459832 2 TA AG scaffold26809 ScafM SNP 0007.scaffold00024 459835 2 CA GG scaffold26809 ScafM SNP 0007.scaffold00024 459840 2 TT AA scaffold26809 ScafM SNP 0007.scaffold00024 459844 1 A G scaffold26809 ScafM INDEL 0007.scaffold00024 459859 1 A . scaffold26809 ScafM SNP 0007.scaffold00024 477286 1 A T scaffold17220 ScafM SNP 0007.scaffold00024 477290 1 G A scaffold17220 ScafM SNP 0007.scaffold00024 477293 1 G A scaffold17220 ScafM SNP 0007.scaffold00024 558109 2 TA GG scaffold5666 ScafM SNP 0007.scaffold00024 558163 2 TT GG scaffold5666 ScafM SNP 0007.scaffold00024 558166 1 A G scaffold5666 ScafM INDEL 0007.scaffold00024 558168 5 TTTTT ..GGC scaffold5666 ScafM SNP 0007.scaffold00024 558174 4 TTTT AGGG scaffold5666 ScafM SNP 0007.scaffold00024 558180 2 TA GG scaffold5666 ScafM INDEL 0007.scaffold00024 558184 5 TTTTA ...CG scaffold5666 ScafM INDEL 0007.scaffold00024 558190 3 TTT .GG scaffold5666 ScafM SNP 0007.scaffold00024 558197 3 CAA GGG scaffold5666 ReadM SNP 0007.scaffold00024 564911 1 G C - ReadM SNP 0007.scaffold00024 566021 1 A G - ReadM SNP 0007.scaffold00024 599998 1 G T - ScafM SNP 0007.scaffold00024 608205 1 T C scaffold11623 ScafM INDEL 0007.scaffold00024 608389 1 . A scaffold11623 ScafM SNP 0007.scaffold00024 609498 1 T G scaffold11623 ScafM SNP 0007.scaffold00024 609544 1 T G scaffold11623 ScafM INDEL 0007.scaffold00024 609650 10 .......... CTGATAAAGG scaffold11623 ScafM SNP 0007.scaffold00024 609689 1 G T scaffold11623 ScafM INDEL 0007.scaffold00024 609701 3 ... TCG scaffold11623 ScafM SNP 0007.scaffold00024 609743 1 G A scaffold11623 ScafM SNP 0007.scaffold00024 609748 1 C G scaffold11623 ScafM SNP 0007.scaffold00024 609763 1 G A scaffold11623 ScafM SNP 0007.scaffold00024 609783 1 G A scaffold11623 ScafM INDEL 0007.scaffold00024 609914 7 TCCCCAA ....... scaffold11623 Both SNP 0007.scaffold00024 609943 1 T A scaffold11623 ScafM SNP 0007.scaffold00024 633073 1 G A scaffold24996 ScafM INDEL 0007.scaffold00024 637099 15 CTTCAACCCACCATT ............... scaffold5 ScafM INDEL 0007.scaffold00024 642249 5 ..... AAAAA scaffold5 ScafM SNP 0007.scaffold00024 642251 1 G A scaffold5 ScafM SNP 0007.scaffold00024 645809 1 G T scaffold5 ScafM SNP 0007.scaffold00024 646047 1 A G scaffold5 ScafM SNP 0007.scaffold00024 646303 1 C T scaffold5 ScafM SNP 0007.scaffold00024 647093 1 A G scaffold5 ScafM SNP 0007.scaffold00024 647169 1 T G scaffold5 ScafM SNP 0007.scaffold00024 647258 1 C T scaffold5 ScafM INDEL 0007.scaffold00024 656526 2 .. AA scaffold5 Both INDEL 0007.scaffold00024 664437 1 . T scaffold5 ReadM INDEL 0007.scaffold00024 687866 1 . A - ReadM SNP 0007.scaffold00024 721173 1 A G - ReadM SNP 0007.scaffold00024 738919 1 A G - ScafM INDEL 0007.scaffold00024 745122 1 A . scaffold6323 ScafM INDEL 0007.scaffold00024 745133 3 AAC ... scaffold6323 ScafM SNP 0007.scaffold00024 745165 1 A T scaffold6323 ScafM SNP 0007.scaffold00024 745168 1 A G scaffold6323 ScafM SNP 0007.scaffold00024 745179 1 A G scaffold6323 ScafM SNP 0007.scaffold00024 745203 1 C T scaffold6323 ScafM SNP 0007.scaffold00024 745208 1 G T scaffold6323 ScafM SNP 0007.scaffold00024 745210 1 G T scaffold6323 ScafM SNP 0007.scaffold00024 745221 1 A C scaffold6323 ScafM SNP 0007.scaffold00024 745228 1 T A scaffold6323 ScafM INDEL 0007.scaffold00024 745231 2 GA .. scaffold6323 ScafM INDEL 0007.scaffold00024 745242 1 C . scaffold6323 ScafM SNP 0007.scaffold00024 745284 1 C G scaffold6323 ScafM SNP 0007.scaffold00024 745286 1 G C scaffold6323 ScafM SNP 0007.scaffold00024 745310 1 T C scaffold6323 ScafM SNP 0007.scaffold00024 745320 1 T A scaffold6323 ScafM SNP 0007.scaffold00024 745322 1 A C scaffold6323 ScafM SNP 0007.scaffold00024 745332 1 C A scaffold6323 ScafM SNP 0007.scaffold00024 745348 1 C T scaffold6323 ScafM SNP 0007.scaffold00024 745363 1 T A scaffold6323 ScafM SNP 0007.scaffold00024 745407 1 C T scaffold6323 ScafM SNP 0007.scaffold00024 745420 1 T C scaffold6323 ScafM SNP 0007.scaffold00024 745424 1 T C scaffold6323 ScafM SNP 0007.scaffold00024 745426 1 T C scaffold6323 ScafM SNP 0007.scaffold00024 745440 1 G C scaffold6323 ScafM SNP 0007.scaffold00024 745446 1 G A scaffold6323 ScafM SNP 0007.scaffold00024 745449 1 T C scaffold6323 ScafM SNP 0007.scaffold00024 745459 2 CA TG scaffold6323 ScafM SNP 0007.scaffold00024 745477 1 G A scaffold6323 ScafM SNP 0007.scaffold00024 745480 1 A C scaffold6323 ScafM SNP 0007.scaffold00024 745483 1 G A scaffold6323 ScafM SNP 0007.scaffold00024 745485 1 T C scaffold6323 ScafM INDEL 0007.scaffold00024 745493 1 A . scaffold6323 ScafM SNP 0007.scaffold00024 745498 1 G T scaffold6323 ReadM INDEL 0007.scaffold00024 769620 1 C . - ReadM SNP 0007.scaffold00024 776932 1 G A - ScafM INDEL 0007.scaffold00024 777737 1 . A scaffold19838 ReadM SNP 0007.scaffold00024 789962 1 G A - ScafM INDEL 0007.scaffold00024 804132 48 ................................................ TAACCATCGGCAAGGGGGTTCTTTAACCCTTATCATAGGGAAGGACCT scaffold19838 ScafM SNP 0007.scaffold00024 804145 2 GG TA scaffold19838 ScafM SNP 0007.scaffold00024 804158 1 G A scaffold19838 ReadM INDEL 0007.scaffold00024 804282 1 A . - ScafM INDEL 0007.scaffold00024 805128 2 AA .. scaffold19838 ScafM SNP 0007.scaffold00024 810160 1 A G scaffold17438 ScafM SNP 0007.scaffold00024 810163 1 G A scaffold17438 ReadM INDEL 0007.scaffold00024 813082 1 T . - ReadM SNP 0007.scaffold00024 813121 1 C A - ReadM SNP 0007.scaffold00024 813127 1 C G - ReadM SNP 0007.scaffold00024 813152 1 C A - ReadM SNP 0007.scaffold00024 813175 1 A G - ReadM SNP 0007.scaffold00024 813226 1 G A - ReadM INDEL 0007.scaffold00024 814859 1 . G - ReadM SNP 0007.scaffold00024 814876 1 C T - ReadM SNP 0007.scaffold00024 814949 1 T C - ScafM SNP 0007.scaffold00024 816867 1 C G scaffold3699 ScafM SNP 0007.scaffold00024 816883 1 A G scaffold3699 ScafM INDEL 0007.scaffold00024 816954 1 . T scaffold3699 ReadM SNP 0007.scaffold00024 832187 1 A G - ScafM SNP 0007.scaffold00024 841929 1 T C scaffold3699 ScafM SNP 0007.scaffold00024 844999 1 T C scaffold3699 ScafM SNP 0007.scaffold00024 848478 1 C T scaffold3699 ScafM SNP 0007.scaffold00024 876422 1 A T scaffold20170 ScafM SNP 0007.scaffold00024 876702 1 G A scaffold20170 ScafM SNP 0007.scaffold00024 876867 1 A T scaffold20170 ScafM SNP 0007.scaffold00024 880318 1 A G scaffold20170 ScafM SNP 0007.scaffold00024 880334 1 A G scaffold20170 ScafM INDEL 0007.scaffold00024 885844 1 . T scaffold20170 ScafM INDEL 0007.scaffold00024 892034 2 .. AA scaffold20170 ScafM INDEL 0007.scaffold00024 896000 1 . T scaffold20170 ScafM INDEL 0007.scaffold00024 899055 3 ... CAA scaffold20170 ScafM INDEL 0007.scaffold00024 941905 15 ............... GTGGGGGGGGGGGGT scaffold11326 ScafM SNP 0007.scaffold00024 953127 1 G A scaffold1233 ScafM SNP 0007.scaffold00024 953135 1 A G scaffold1233 ScafM SNP 0007.scaffold00024 953176 1 G T scaffold1233 ScafM SNP 0007.scaffold00024 953202 1 G A scaffold1233 ScafM INDEL 0007.scaffold00024 1014006 24 ........................ CTTTTTTTTTTTTTTTGGGTCTTT scaffold10439 ScafM INDEL 0007.scaffold00024 1016539 25 ......................... TTTGGTTCTTTTTTTTTTTTTTTTT scaffold10439 Both SNP 0007.scaffold00024 1030837 1 T C scaffold10439 ScafM INDEL 0007.scaffold00024 1041777 1 T . scaffold11171 ScafM SNP 0007.scaffold00024 1041782 1 T A scaffold11171 ScafM SNP 0007.scaffold00024 1041787 1 T A scaffold11171 ScafM INDEL 0007.scaffold00024 1041850 1 C . scaffold11171 ScafM INDEL 0007.scaffold00024 1042030 1 A . scaffold11171 ScafM SNP 0007.scaffold00024 1042048 1 C T scaffold11171 ScafM SNP 0007.scaffold00024 1042051 2 TC AT scaffold11171 ScafM SNP 0007.scaffold00024 1042054 1 C A scaffold11171 ScafM SNP 0007.scaffold00024 1042085 1 A T scaffold11171 ScafM SNP 0007.scaffold00024 1042095 1 A C scaffold11171 ScafM SNP 0007.scaffold00024 1042117 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042133 1 T C scaffold11171 ScafM INDEL 0007.scaffold00024 1042138 2 AA .. scaffold11171 ScafM SNP 0007.scaffold00024 1042154 1 A G scaffold11171 ScafM SNP 0007.scaffold00024 1042163 1 A T scaffold11171 ScafM SNP 0007.scaffold00024 1042167 1 T G scaffold11171 ScafM SNP 0007.scaffold00024 1042189 1 C A scaffold11171 ScafM SNP 0007.scaffold00024 1042200 1 T G scaffold11171 ScafM SNP 0007.scaffold00024 1042219 2 GT AC scaffold11171 ScafM SNP 0007.scaffold00024 1042273 1 C T scaffold11171 ScafM SNP 0007.scaffold00024 1042277 1 G C scaffold11171 ScafM SNP 0007.scaffold00024 1042353 1 T G scaffold11171 ScafM SNP 0007.scaffold00024 1042362 1 A T scaffold11171 ScafM SNP 0007.scaffold00024 1042384 1 C T scaffold11171 ScafM SNP 0007.scaffold00024 1042397 1 A G scaffold11171 ScafM SNP 0007.scaffold00024 1042400 1 C A scaffold11171 ScafM SNP 0007.scaffold00024 1042409 1 C G scaffold11171 ScafM SNP 0007.scaffold00024 1042414 1 G C scaffold11171 ScafM SNP 0007.scaffold00024 1042423 1 T C scaffold11171 ScafM SNP 0007.scaffold00024 1042449 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042453 1 C A scaffold11171 ScafM SNP 0007.scaffold00024 1042467 2 AC TA scaffold11171 ScafM SNP 0007.scaffold00024 1042488 1 C G scaffold11171 ScafM SNP 0007.scaffold00024 1042506 1 C G scaffold11171 ScafM SNP 0007.scaffold00024 1042520 1 T G scaffold11171 ScafM SNP 0007.scaffold00024 1042531 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042558 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042573 1 A G scaffold11171 ScafM SNP 0007.scaffold00024 1042637 1 T C scaffold11171 ScafM SNP 0007.scaffold00024 1042650 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042658 1 G A scaffold11171 ScafM SNP 0007.scaffold00024 1042671 1 C T scaffold11171 ScafM SNP 0007.scaffold00024 1042679 1 C T scaffold11171 ScafM SNP 0007.scaffold00024 1042681 1 A G scaffold11171 ScafM SNP 0007.scaffold00024 1042683 1 A C scaffold11171 ScafM SNP 0007.scaffold00024 1042752 1 G T scaffold43553 ScafM SNP 0007.scaffold00024 1042755 1 C T scaffold43553 ScafM SNP 0007.scaffold00024 1042767 1 G A scaffold43553 ScafM SNP 0007.scaffold00024 1042770 2 GT CC scaffold43553 ScafM SNP 0007.scaffold00024 1042781 1 C T scaffold43553 ScafM SNP 0007.scaffold00024 1042804 1 G C scaffold43553 ScafM SNP 0007.scaffold00024 1042807 1 A G scaffold43553 ScafM SNP 0007.scaffold00024 1042813 1 C T scaffold43553 ScafM SNP 0007.scaffold00024 1042837 1 G T scaffold43553 ScafM SNP 0007.scaffold00024 1042840 2 TA CT scaffold43553 ScafM SNP 0007.scaffold00024 1042847 1 C A scaffold43553 ScafM SNP 0007.scaffold00024 1042854 1 T C scaffold43553 ScafM SNP 0007.scaffold00024 1042859 2 AC GT scaffold43553 ScafM SNP 0007.scaffold00024 1042864 1 C T scaffold43553 ScafM SNP 0007.scaffold00024 1042890 1 G A scaffold43553 ScafM INDEL 0007.scaffold00024 1042896 4 .... TGCT scaffold43553 ScafM SNP 0007.scaffold00024 1042934 2 TA CC scaffold43553 ScafM SNP 0007.scaffold00024 1042937 1 G T scaffold43553 ScafM SNP 0007.scaffold00024 1042956 1 C G scaffold43553 ScafM SNP 0007.scaffold00024 1042964 1 C A scaffold43553 ScafM SNP 0007.scaffold00024 1042968 1 C T scaffold43553 ReadM SNP 0007.scaffold00024 1060662 1 G T - ScafM INDEL 0007.scaffold00024 1076952 1 A . scaffold1881 ScafM SNP 0007.scaffold00024 1082520 1 A G scaffold1881 ReadM SNP 0007.scaffold00024 1097679 1 T A - ScafM SNP 0007.scaffold00024 1121577 1 T C scaffold16326 ScafM SNP 0007.scaffold00024 1121842 1 G C scaffold16326 ScafM SNP 0007.scaffold00024 1132504 1 C T scaffold16326 ScafM SNP 0007.scaffold00024 1132873 1 T C scaffold16326 Both SNP 0007.scaffold00024 1133027 1 T A scaffold16326 ReadM INDEL 0007.scaffold00024 1149016 2 TT .. - ReadM SNP 0007.scaffold00024 1164362 1 A G - ReadM SNP 0007.scaffold00024 1173191 1 G T - ScafM INDEL 0007.scaffold00024 1183148 1 . A scaffold1456 ScafM INDEL 0007.scaffold00024 1198628 1 . A scaffold1456 ReadM INDEL 0007.scaffold00024 1198636 1 . T - ScafM SNP 0007.scaffold00024 1220845 1 T C scaffold1456 ScafM SNP 0007.scaffold00024 1234141 1 A G scaffold25306 ScafM SNP 0007.scaffold00024 1234159 1 A G scaffold25306 ScafM SNP 0007.scaffold00024 1234193 1 C T scaffold25306 ScafM SNP 0007.scaffold00024 1234355 1 A G scaffold25306 ScafM SNP 0007.scaffold00024 1234732 1 T C scaffold25306 ScafM SNP 0007.scaffold00024 1237839 1 T C scaffold23359 ScafM SNP 0007.scaffold00024 1237877 1 C A scaffold23359 ScafM SNP 0007.scaffold00024 1238328 1 C T scaffold6103 ScafM SNP 0007.scaffold00024 1238404 1 T A scaffold6103 ScafM SNP 0007.scaffold00024 1271281 1 T C scaffold11782 ReadM SNP 0007.scaffold00024 1311193 1 G T - ScafM SNP 0007.scaffold00024 1353891 1 G A scaffold23973 ScafM INDEL 0007.scaffold00024 1358468 9 TTCCAAAAT ......... scaffold23973 ScafM SNP 0007.scaffold00024 1404365 1 G A scaffold11882 ScafM SNP 0007.scaffold00024 1404412 1 T A scaffold11882 ScafM SNP 0007.scaffold00024 1404423 2 CT TC scaffold11882 ScafM SNP 0007.scaffold00024 1404428 1 T G scaffold11882 ReadM SNP 0007.scaffold00024 1406345 1 G A - ScafM SNP 0007.scaffold00024 1419390 1 T C scaffold4066 ScafM SNP 0007.scaffold00024 1460007 1 T A scaffold7362 ScafM SNP 0007.scaffold00024 1460023 1 C A scaffold7362 ScafM SNP 0007.scaffold00024 1460037 1 G A scaffold7362 ScafM SNP 0007.scaffold00024 1460080 1 T C scaffold7362 ScafM SNP 0007.scaffold00024 1460108 1 G T scaffold7362 ScafM SNP 0007.scaffold00024 1460125 1 T G scaffold7362 ScafM SNP 0007.scaffold00024 1460193 1 A G scaffold7362 ScafM SNP 0007.scaffold00024 1465813 1 A G scaffold8512 ScafM SNP 0007.scaffold00024 1466713 1 C G scaffold8512 ScafM SNP 0007.scaffold00024 1466719 1 A G scaffold8512 Both SNP 0007.scaffold00024 1466757 1 A G scaffold8512 ScafM INDEL 0007.scaffold00024 1490214 1 A . scaffold8512 ReadM INDEL 0007.scaffold00024 1527225 1 . A - ScafM SNP 0007.scaffold00024 1563844 1 A C scaffold34431 ScafM SNP 0007.scaffold00024 1584002 1 A T scaffold13591 ScafM SNP 0007.scaffold00024 1584017 1 G A scaffold13591 ScafM SNP 0007.scaffold00024 1584110 1 A G scaffold13591 ScafM SNP 0007.scaffold00024 1584117 1 T G scaffold13591 ScafM SNP 0007.scaffold00024 1593581 1 A G scaffold24049 ScafM SNP 0007.scaffold00024 1618152 1 G T scaffold4035 ScafM INDEL 0007.scaffold00024 1629963 14 .............. GGGGGGGGGGGGGG scaffold414 ReadM SNP 0007.scaffold00024 1637867 1 T C - ReadM SNP 0007.scaffold00024 1659000 1 A G - ScafM INDEL 0007.scaffold00024 1679073 1 T . scaffold414 ScafM INDEL 0007.scaffold00024 1679075 1 . T scaffold414 ScafM SNP 0007.scaffold00024 1696237 1 C A scaffold11232 ScafM SNP 0007.scaffold00024 1696256 1 T G scaffold11232 ScafM SNP 0007.scaffold00024 1696261 1 T C scaffold11232 ScafM SNP 0007.scaffold00024 1696269 2 TG CA scaffold11232 ScafM SNP 0007.scaffold00024 1696275 1 G A scaffold11232 ScafM SNP 0007.scaffold00024 1696282 1 C T scaffold11232 ScafM INDEL 0007.scaffold00024 1696301 1 . C scaffold11232 ScafM SNP 0007.scaffold00024 1696313 1 C T scaffold11232 ScafM SNP 0007.scaffold00024 1696320 1 T C scaffold11232 ScafM SNP 0007.scaffold00024 1696323 1 T C scaffold11232 ScafM SNP 0007.scaffold00024 1696339 1 C T scaffold11232 ScafM SNP 0007.scaffold00024 1696348 1 T A scaffold11232 ScafM SNP 0007.scaffold00024 1696358 1 T C scaffold11232 ScafM SNP 0007.scaffold00024 1696367 1 G A scaffold11232 ScafM INDEL 0007.scaffold00024 1696382 2 AA .. scaffold11232 ScafM INDEL 0007.scaffold00024 1696389 2 AG .. scaffold11232 ScafM SNP 0007.scaffold00024 1696418 1 A T scaffold11232 ScafM SNP 0007.scaffold00024 1696424 1 C T scaffold11232 ScafM SNP 0007.scaffold00024 1696442 1 T G scaffold11232 ScafM SNP 0007.scaffold00024 1696445 1 T C scaffold11232 ScafM SNP 0007.scaffold00024 1696488 2 TC CA scaffold11232 ScafM INDEL 0007.scaffold00024 1696500 2 TA .C scaffold11232 ScafM SNP 0007.scaffold00024 1696517 1 C G scaffold11232 ScafM SNP 0007.scaffold00024 1719938 1 G A scaffold30637 ScafM SNP 0007.scaffold00024 1720559 1 C G scaffold30637 ScafM INDEL 0007.scaffold00024 1720571 3 ... CTT scaffold30637 ScafM INDEL 0007.scaffold00024 1720595 11 GTTTTTTTTTT ........... scaffold30637 ScafM INDEL 0007.scaffold00024 1721265 1 . A scaffold30637 ScafM SNP 0007.scaffold00024 1721296 1 C G scaffold30637 ScafM INDEL 0007.scaffold00024 1733335 1 . T scaffold9577 ScafM SNP 0007.scaffold00024 1753346 1 C A scaffold30144 ScafM SNP 0007.scaffold00024 1753360 1 T A scaffold30144 ScafM SNP 0007.scaffold00024 1753369 1 G T scaffold30144 ScafM SNP 0007.scaffold00024 1753433 1 T C scaffold30144 ScafM INDEL 0007.scaffold00024 1753435 3 TTC ... scaffold30144 ScafM SNP 0007.scaffold00024 1753527 1 G A scaffold30144 ScafM INDEL 0007.scaffold00024 1753535 2 TG .. scaffold30144 ScafM INDEL 0007.scaffold00024 1753590 1 . C scaffold30144 ScafM SNP 0007.scaffold00024 1753635 1 T G scaffold30144 ScafM SNP 0007.scaffold00024 1753647 1 T A scaffold30144 ScafM INDEL 0007.scaffold00024 1753658 2 CT .. scaffold30144 ScafM INDEL 0007.scaffold00024 1753684 1 . C scaffold30144 ScafM SNP 0007.scaffold00024 1767482 1 A G scaffold13891 ScafM SNP 0007.scaffold00024 1767509 1 A G scaffold13891 ScafM SNP 0007.scaffold00024 1768304 1 G A scaffold2149 ScafM SNP 0007.scaffold00024 1768350 1 A G scaffold2149 ReadM INDEL 0007.scaffold00024 1772288 1 . T - ReadM SNP 0007.scaffold00024 1788148 1 A T - ScafM SNP 0007.scaffold00024 1792839 1 G A scaffold30917 ScafM SNP 0007.scaffold00024 1793035 1 G A scaffold30917 ScafM SNP 0007.scaffold00024 1793037 1 G A scaffold30917 ScafM SNP 0007.scaffold00024 1793056 1 T C scaffold30917 ScafM SNP 0007.scaffold00024 1793070 1 A G scaffold30917 ScafM INDEL 0007.scaffold00024 1793072 1 . A scaffold30917 ScafM SNP 0007.scaffold00024 1793097 1 T G scaffold30917 ScafM SNP 0007.scaffold00024 1793101 1 A G scaffold30917 ScafM SNP 0007.scaffold00024 1793104 1 G T scaffold30917 ScafM SNP 0007.scaffold00024 1793126 1 A T scaffold30917 ScafM SNP 0007.scaffold00024 1793183 1 C T scaffold30917 ScafM INDEL 0007.scaffold00024 1793185 1 C . scaffold30917 ScafM SNP 0007.scaffold00024 1793188 1 A C scaffold30917 ScafM INDEL 0007.scaffold00024 1793192 5 GGGGC ..... scaffold30917 ScafM SNP 0007.scaffold00024 1793233 1 T C scaffold30917 ScafM SNP 0007.scaffold00024 1793238 1 G A scaffold30917 ScafM SNP 0007.scaffold00024 1793263 2 CA TG scaffold30917 ScafM INDEL 0007.scaffold00024 1793299 3 TAG ... scaffold30917 ScafM INDEL 0007.scaffold00024 1793303 7 TGAGATA ....... scaffold30917 ScafM INDEL 0007.scaffold00024 1793312 1 G . scaffold30917 ScafM INDEL 0007.scaffold00024 1793317 6 CCTGTC ...... scaffold30917 ScafM SNP 0007.scaffold00024 1793384 1 A G scaffold30917 ScafM SNP 0007.scaffold00024 1793462 1 G A scaffold30917 ScafM SNP 0007.scaffold00024 1793466 1 C T scaffold30917 ScafM SNP 0007.scaffold00024 1794883 1 A T scaffold2924 ScafM SNP 0007.scaffold00024 1795000 1 G A scaffold2924 ScafM INDEL 0007.scaffold00024 1800215 2 CG .. scaffold2924 ScafM INDEL 0007.scaffold00024 1800252 1 A . scaffold2924 ScafM INDEL 0007.scaffold00024 1800255 1 G . scaffold2924 ScafM INDEL 0007.scaffold00024 1800262 16 CGGAGGAGAAAGATAT ................ scaffold2924 ScafM INDEL 0007.scaffold00024 1819956 1 . T scaffold3603 ScafM SNP 0007.scaffold00024 1819958 1 G T scaffold3603 ScafM SNP 0007.scaffold00024 1819961 1 A G scaffold3603 ScafM SNP 0007.scaffold00024 1819982 1 A T scaffold3603 ScafM INDEL 0007.scaffold00024 1820018 1 A . scaffold3603 ScafM SNP 0007.scaffold00024 1820021 1 A T scaffold3603 ScafM SNP 0007.scaffold00024 1820028 2 AA GC scaffold3603 ScafM SNP 0007.scaffold00024 1820075 1 A G scaffold3603 ScafM SNP 0007.scaffold00024 1820078 1 A C scaffold3603 ScafM SNP 0007.scaffold00024 1820095 1 C T scaffold3603 ScafM SNP 0007.scaffold00024 1820120 1 C A scaffold3603 ScafM SNP 0007.scaffold00024 1820129 1 G C scaffold3603 ScafM SNP 0007.scaffold00024 1820148 1 C T scaffold3603 ScafM SNP 0007.scaffold00024 1820155 1 T C scaffold3603 ScafM SNP 0007.scaffold00024 1820616 1 G A scaffold3603 ScafM SNP 0007.scaffold00024 1820619 1 A G scaffold3603 ScafM SNP 0007.scaffold00024 1820634 1 G A scaffold3603 ScafM SNP 0007.scaffold00024 1820640 1 C A scaffold3603 ScafM SNP 0007.scaffold00024 1820824 1 G A scaffold3603 ScafM SNP 0007.scaffold00024 1820837 1 A G scaffold3603 ReadM INDEL 0007.scaffold00024 1834270 2 GG .. - ReadM INDEL 0007.scaffold00024 1856007 1 . A - ScafM INDEL 0007.scaffold00024 1886451 1 . G scaffold3211 ScafM INDEL 0007.scaffold00024 1899367 31 ............................... TGGGGGGGGGGGGGGGGGCAAGTGAGGAAGT scaffold3211 Both INDEL 0007.scaffold00024 1899693 1 . T scaffold3211 ScafM INDEL 0007.scaffold00024 1911109 2 .. AA scaffold3211 ScafM INDEL 0007.scaffold00024 1912736 1 . C scaffold6096 ScafM SNP 0007.scaffold00024 1921613 1 C T scaffold25623 ScafM SNP 0007.scaffold00024 1921660 1 G A scaffold25623 ScafM SNP 0007.scaffold00024 1921779 1 G C scaffold25623 ScafM SNP 0007.scaffold00024 1922011 1 T A scaffold25623 ScafM SNP 0007.scaffold00024 1922013 1 G A scaffold25623 ScafM SNP 0007.scaffold00024 1922546 1 A T scaffold43784 ScafM SNP 0007.scaffold00024 1922550 1 G A scaffold43784 ScafM SNP 0007.scaffold00024 1922555 1 A G scaffold43784 ScafM SNP 0007.scaffold00024 1922571 2 CC TT scaffold43784 ScafM SNP 0007.scaffold00024 1922593 1 C T scaffold43784 ScafM SNP 0007.scaffold00024 1922598 1 A G scaffold43784 ScafM SNP 0007.scaffold00024 1924590 2 AA GG scaffold38120 ScafM INDEL 0007.scaffold00024 1924603 11 ........... TAAGCCACCAT scaffold38120 ScafM SNP 0007.scaffold00024 1924608 1 A C scaffold38120 ScafM SNP 0007.scaffold00024 1924620 1 C G scaffold38120 ScafM SNP 0007.scaffold00024 1924633 1 C A scaffold38120 ScafM SNP 0007.scaffold00024 1924656 1 T C scaffold38120 ScafM SNP 0007.scaffold00024 1924674 1 G A scaffold38120 ScafM SNP 0007.scaffold00024 1924696 1 T C scaffold38120 ScafM SNP 0007.scaffold00024 1924818 1 A C scaffold38120 ScafM INDEL 0007.scaffold00024 1924896 6 ...... CCCATC scaffold38120 ScafM SNP 0007.scaffold00024 1924905 1 G C scaffold38120 ScafM SNP 0007.scaffold00024 1924942 1 A T scaffold38120 ScafM SNP 0007.scaffold00024 1924944 1 G C scaffold38120 ScafM SNP 0007.scaffold00024 1924976 1 T C scaffold38120 ScafM SNP 0007.scaffold00024 1924992 1 T C scaffold38120 ScafM SNP 0007.scaffold00024 1925029 1 T C scaffold38120 ScafM SNP 0007.scaffold00024 1925079 1 G A scaffold38120 ScafM SNP 0007.scaffold00024 1925116 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1925125 2 TT CA scaffold38120 ScafM SNP 0007.scaffold00024 1925188 1 A C scaffold38120 ScafM SNP 0007.scaffold00024 1925228 2 CC TT scaffold38120 ScafM SNP 0007.scaffold00024 1925297 2 GC AT scaffold38120 ScafM SNP 0007.scaffold00024 1925424 1 C G scaffold38120 ScafM SNP 0007.scaffold00024 1925468 1 A G scaffold38120 ScafM SNP 0007.scaffold00024 1925520 1 T G scaffold38120 ScafM SNP 0007.scaffold00024 1925544 1 A C scaffold38120 ScafM SNP 0007.scaffold00024 1925563 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1925589 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1925623 1 C G scaffold38120 ScafM SNP 0007.scaffold00024 1925659 1 G A scaffold38120 ScafM SNP 0007.scaffold00024 1925662 1 C A scaffold38120 ScafM SNP 0007.scaffold00024 1925677 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1925704 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1925710 1 C T scaffold38120 ScafM SNP 0007.scaffold00024 1926245 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926264 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926267 1 A G scaffold20755 ScafM SNP 0007.scaffold00024 1926272 1 T G scaffold20755 ScafM SNP 0007.scaffold00024 1926295 1 T A scaffold20755 ScafM SNP 0007.scaffold00024 1926310 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926369 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926378 1 G T scaffold20755 ScafM SNP 0007.scaffold00024 1926411 1 A G scaffold20755 ScafM SNP 0007.scaffold00024 1926439 1 C A scaffold20755 ScafM SNP 0007.scaffold00024 1926445 1 A G scaffold20755 ScafM INDEL 0007.scaffold00024 1926462 1 A . scaffold20755 ScafM SNP 0007.scaffold00024 1926489 1 C G scaffold20755 ScafM SNP 0007.scaffold00024 1926503 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926531 1 T A scaffold20755 ScafM SNP 0007.scaffold00024 1926558 1 A G scaffold20755 ScafM SNP 0007.scaffold00024 1926563 1 T G scaffold20755 ScafM SNP 0007.scaffold00024 1926565 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926606 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926633 1 T G scaffold20755 ScafM SNP 0007.scaffold00024 1926663 1 G T scaffold20755 ScafM SNP 0007.scaffold00024 1926696 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1926718 1 T C scaffold20755 ScafM SNP 0007.scaffold00024 1926801 1 C T scaffold20755 ScafM SNP 0007.scaffold00024 1926849 1 T C scaffold20755 ScafM SNP 0007.scaffold00024 1926857 1 A G scaffold20755 ScafM SNP 0007.scaffold00024 1926947 1 A G scaffold20755 ScafM SNP 0007.scaffold00024 1926974 1 G A scaffold20755 ScafM SNP 0007.scaffold00024 1927358 1 C T scaffold34747 ScafM SNP 0007.scaffold00024 1927378 1 A G scaffold34747 ScafM SNP 0007.scaffold00024 1927394 1 C T scaffold34747 ScafM INDEL 0007.scaffold00024 1927430 2 AC .. scaffold34747 ScafM INDEL 0007.scaffold00024 1932770 30 ATTAATGTTCTTCCCCAATTCCCCAACCCT .............................. scaffold456 Both SNP 0007.scaffold00024 1933058 1 A C scaffold456 ReadM SNP 0007.scaffold00024 1942302 1 T G - ScafM SNP 0007.scaffold00024 1963953 1 T C scaffold7513 ScafM INDEL 0007.scaffold00024 1992167 56 ........................................................ CTTGTTCTATGTTAATGTAATATGCACATTTCAAATAGAGATGTTAGTTAGATAAT scaffold8963 ScafM SNP 0007.scaffold00024 2002757 1 A G scaffold8963 ScafM INDEL 0007.scaffold00024 2003906 1 . T scaffold8963 ScafM SNP 0008.scaffold00029 851 1 C T scaffold24062 ScafM SNP 0008.scaffold00029 927 1 T G scaffold24062 ScafM INDEL 0008.scaffold00029 2872 2 .. TA scaffold5116 ScafM SNP 0008.scaffold00029 2880 1 G C scaffold5116 ScafM SNP 0008.scaffold00029 2887 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 2979 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 2981 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 3007 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 3035 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 3088 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 3092 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 3128 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 3151 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 3169 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 3203 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 3205 1 G C scaffold5116 ReadM SNP 0008.scaffold00029 3276 1 G T - ReadM SNP 0008.scaffold00029 3294 1 C T - ReadM SNP 0008.scaffold00029 3302 1 T G - ReadM SNP 0008.scaffold00029 3347 1 T C - ReadM SNP 0008.scaffold00029 4508 1 C A - ScafM SNP 0008.scaffold00029 4612 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 4617 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 4635 2 GT AC scaffold5116 ReadM SNP 0008.scaffold00029 4794 1 C A - Both SNP 0008.scaffold00029 4892 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 4914 1 A G scaffold5116 Both SNP 0008.scaffold00029 4936 1 G C scaffold5116 Both SNP 0008.scaffold00029 4975 1 C T scaffold5116 Both SNP 0008.scaffold00029 4987 1 A G scaffold5116 Both SNP 0008.scaffold00029 5049 1 T G scaffold5116 ReadM INDEL 0008.scaffold00029 5093 1 G . - ReadM SNP 0008.scaffold00029 5110 1 A G - Both INDEL 0008.scaffold00029 5432 1 T . scaffold5116 Both SNP 0008.scaffold00029 5477 1 G A scaffold5116 ReadM SNP 0008.scaffold00029 5491 1 T C - ReadM SNP 0008.scaffold00029 5567 1 A T - ReadM SNP 0008.scaffold00029 5592 1 G C - ReadM SNP 0008.scaffold00029 5625 1 A G - ReadM INDEL 0008.scaffold00029 5641 1 A . - ReadM SNP 0008.scaffold00029 5789 1 T C - ReadM SNP 0008.scaffold00029 5864 1 A C - ReadM SNP 0008.scaffold00029 5946 1 G A - ReadM SNP 0008.scaffold00029 5960 1 G T - ReadM SNP 0008.scaffold00029 6029 1 A G - ReadM SNP 0008.scaffold00029 6146 1 T C - ReadM INDEL 0008.scaffold00029 6277 1 . A - ReadM SNP 0008.scaffold00029 6344 1 T C - ReadM SNP 0008.scaffold00029 6354 1 A G - ReadM SNP 0008.scaffold00029 6475 1 G A - ReadM SNP 0008.scaffold00029 6504 1 T C - ReadM SNP 0008.scaffold00029 6514 1 C A - ReadM SNP 0008.scaffold00029 6566 1 T C - ReadM SNP 0008.scaffold00029 6578 1 T C - ReadM SNP 0008.scaffold00029 6602 1 C T - ReadM SNP 0008.scaffold00029 6654 1 C T - ReadM SNP 0008.scaffold00029 6669 1 G A - ReadM SNP 0008.scaffold00029 6695 1 T C - ReadM INDEL 0008.scaffold00029 6719 1 A . - ReadM SNP 0008.scaffold00029 6734 1 C T - ReadM SNP 0008.scaffold00029 6888 1 A G - ReadM SNP 0008.scaffold00029 6901 1 G A - ReadM SNP 0008.scaffold00029 6992 1 C T - ReadM SNP 0008.scaffold00029 7082 1 G A - ReadM SNP 0008.scaffold00029 7276 1 C T - ReadM SNP 0008.scaffold00029 7351 1 A G - ReadM SNP 0008.scaffold00029 7375 1 A G - ReadM SNP 0008.scaffold00029 7391 1 C T - ReadM SNP 0008.scaffold00029 7404 1 G T - ReadM SNP 0008.scaffold00029 7493 1 G A - ReadM SNP 0008.scaffold00029 7529 1 T A - ReadM SNP 0008.scaffold00029 7539 1 G A - ReadM SNP 0008.scaffold00029 7647 1 T C - ReadM SNP 0008.scaffold00029 7688 1 C T - ReadM SNP 0008.scaffold00029 7722 1 G A - ReadM SNP 0008.scaffold00029 7732 1 A C - ReadM SNP 0008.scaffold00029 7828 1 T G - ReadM SNP 0008.scaffold00029 7859 1 C G - ReadM SNP 0008.scaffold00029 7864 1 A G - ReadM SNP 0008.scaffold00029 8008 1 A G - ReadM SNP 0008.scaffold00029 8051 1 G A - ReadM SNP 0008.scaffold00029 8071 1 T G - ReadM SNP 0008.scaffold00029 8076 1 G C - ReadM SNP 0008.scaffold00029 8285 1 T C - ReadM INDEL 0008.scaffold00029 8413 2 TA .. - ReadM SNP 0008.scaffold00029 8424 1 C A - ReadM SNP 0008.scaffold00029 8480 1 T G - ReadM SNP 0008.scaffold00029 8530 1 G A - ReadM SNP 0008.scaffold00029 8650 1 T G - ReadM SNP 0008.scaffold00029 8704 1 T C - ReadM SNP 0008.scaffold00029 8781 1 A G - ReadM SNP 0008.scaffold00029 8938 1 G A - ReadM SNP 0008.scaffold00029 9010 1 A G - ReadM SNP 0008.scaffold00029 9014 1 C A - ReadM SNP 0008.scaffold00029 9019 1 T G - ReadM SNP 0008.scaffold00029 9086 1 G C - ReadM SNP 0008.scaffold00029 9137 1 T A - ReadM INDEL 0008.scaffold00029 9310 1 G . - Both SNP 0008.scaffold00029 9330 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 9341 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 9379 2 TG AT scaffold5116 ScafM SNP 0008.scaffold00029 9404 2 AT CA scaffold5116 ScafM SNP 0008.scaffold00029 9431 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 9470 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 9536 2 AA CG scaffold5116 ScafM INDEL 0008.scaffold00029 9544 2 GA .T scaffold5116 ScafM SNP 0008.scaffold00029 9550 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 9565 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 10089 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 10098 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 10248 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 10258 1 T C scaffold5116 ReadM SNP 0008.scaffold00029 10473 1 G T - ReadM INDEL 0008.scaffold00029 10479 1 A . - Both SNP 0008.scaffold00029 10743 1 T G scaffold5116 Both SNP 0008.scaffold00029 10795 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 10892 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 10905 1 A C scaffold5116 ScafM INDEL 0008.scaffold00029 10926 7 ACTCGTA ....... scaffold5116 ScafM SNP 0008.scaffold00029 11031 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 11041 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 11043 1 C T scaffold5116 ScafM INDEL 0008.scaffold00029 11086 2 GA .T scaffold5116 ScafM SNP 0008.scaffold00029 11111 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 11125 1 T G scaffold5116 Both SNP 0008.scaffold00029 11166 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 11217 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 11240 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 11256 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 11272 1 T C scaffold5116 ScafM INDEL 0008.scaffold00029 11274 1 . G scaffold5116 ScafM SNP 0008.scaffold00029 11288 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 11295 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 11359 1 G C scaffold5116 ScafM SNP 0008.scaffold00029 11380 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 11399 1 T C scaffold5116 ScafM INDEL 0008.scaffold00029 11414 1 . T scaffold5116 ScafM SNP 0008.scaffold00029 13576 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 13582 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 13629 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 13632 1 A T scaffold5116 ScafM SNP 0008.scaffold00029 13634 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 13643 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 13680 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 13696 1 A C scaffold5116 ScafM INDEL 0008.scaffold00029 13758 1 . G scaffold5116 ScafM SNP 0008.scaffold00029 13780 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 13797 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 13805 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 13822 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 13861 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 13864 1 C G scaffold5116 ScafM SNP 0008.scaffold00029 13870 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 13887 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 13890 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 13897 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 13905 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 13926 1 T C scaffold5116 ScafM INDEL 0008.scaffold00029 13943 2 TT .. scaffold5116 ScafM SNP 0008.scaffold00029 13946 1 T G scaffold5116 ScafM SNP 0008.scaffold00029 13957 1 A T scaffold5116 ScafM SNP 0008.scaffold00029 14008 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 14287 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 14290 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 14320 2 AT GC scaffold5116 ScafM SNP 0008.scaffold00029 14867 1 A T scaffold5116 ScafM SNP 0008.scaffold00029 14898 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 14923 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 14937 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 14941 1 T A scaffold5116 ScafM INDEL 0008.scaffold00029 14965 1 . A scaffold5116 ScafM INDEL 0008.scaffold00029 14972 3 ... AAC scaffold5116 ScafM SNP 0008.scaffold00029 14997 1 C A scaffold5116 ScafM SNP 0008.scaffold00029 15033 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15039 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 15048 1 G C scaffold5116 ScafM INDEL 0008.scaffold00029 15067 1 . T scaffold5116 ScafM SNP 0008.scaffold00029 15069 2 GT AC scaffold5116 ScafM SNP 0008.scaffold00029 15099 1 C G scaffold5116 ScafM SNP 0008.scaffold00029 15116 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 15128 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15173 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 15569 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 15582 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15594 1 A C scaffold5116 ScafM SNP 0008.scaffold00029 15604 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15610 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 15623 1 A C scaffold5116 ScafM INDEL 0008.scaffold00029 15679 3 TTT ..A scaffold5116 ScafM SNP 0008.scaffold00029 15707 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 15723 1 G A scaffold5116 ScafM INDEL 0008.scaffold00029 15726 6 TAACTA ...... scaffold5116 ScafM SNP 0008.scaffold00029 15746 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 15767 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 15774 1 A G scaffold5116 ScafM INDEL 0008.scaffold00029 15780 1 T . scaffold5116 ScafM SNP 0008.scaffold00029 15842 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 15844 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 15848 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 15867 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15869 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 15871 1 A T scaffold5116 ScafM INDEL 0008.scaffold00029 15878 3 TAA ... scaffold5116 ScafM SNP 0008.scaffold00029 15903 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 15941 1 G T scaffold5116 ScafM SNP 0008.scaffold00029 15948 2 AT TC scaffold5116 ScafM INDEL 0008.scaffold00029 15960 1 . G scaffold5116 ScafM SNP 0008.scaffold00029 16165 1 A T scaffold5116 ScafM SNP 0008.scaffold00029 16194 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 16199 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 16206 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 16217 1 A G scaffold5116 ScafM INDEL 0008.scaffold00029 16229 7 CGATGAA ....... scaffold5116 ScafM INDEL 0008.scaffold00029 16238 7 CCGGCGG ....... scaffold5116 ScafM INDEL 0008.scaffold00029 16246 1 A . scaffold5116 ScafM INDEL 0008.scaffold00029 16248 4 GAGC .... scaffold5116 ScafM SNP 0008.scaffold00029 16286 1 C T scaffold5116 ScafM SNP 0008.scaffold00029 16304 1 A G scaffold5116 ScafM SNP 0008.scaffold00029 17609 1 C T scaffold26138 ReadM SNP 0008.scaffold00029 18181 1 C T - ReadM INDEL 0008.scaffold00029 18197 1 C . - Both SNP 0008.scaffold00029 18240 1 C T scaffold26138 Both SNP 0008.scaffold00029 18298 1 G C scaffold26138 Both SNP 0008.scaffold00029 18343 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 18373 1 T A scaffold26138 ScafM INDEL 0008.scaffold00029 18418 5 ..... ATAAC scaffold26138 ScafM SNP 0008.scaffold00029 18422 1 C T scaffold26138 ScafM INDEL 0008.scaffold00029 18498 7 CAAAAAA ....... scaffold26138 ScafM INDEL 0008.scaffold00029 18582 3 ACA ... scaffold26138 ScafM SNP 0008.scaffold00029 18589 1 G A scaffold26138 ScafM SNP 0008.scaffold00029 18595 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 18600 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 18606 1 A G scaffold26138 ScafM SNP 0008.scaffold00029 18625 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 18629 1 A G scaffold26138 ScafM SNP 0008.scaffold00029 18686 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 18991 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 19007 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 19047 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 19054 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 19056 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 19091 1 G C scaffold26138 Both SNP 0008.scaffold00029 25183 1 T C scaffold26138 Both SNP 0008.scaffold00029 25312 1 C A scaffold26138 Both SNP 0008.scaffold00029 25322 1 G T scaffold26138 Both SNP 0008.scaffold00029 25454 1 T A scaffold26138 Both SNP 0008.scaffold00029 26013 1 T A scaffold26138 Both SNP 0008.scaffold00029 26243 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 26262 1 A G scaffold26138 ScafM INDEL 0008.scaffold00029 26285 1 . C scaffold26138 ScafM INDEL 0008.scaffold00029 26294 9 AACAAGAGC ......... scaffold26138 ScafM INDEL 0008.scaffold00029 26304 1 T . scaffold26138 ScafM SNP 0008.scaffold00029 26310 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 26344 1 C A scaffold26138 ScafM SNP 0008.scaffold00029 26360 2 GG AA scaffold26138 ScafM SNP 0008.scaffold00029 26363 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 26384 1 G A scaffold26138 ScafM SNP 0008.scaffold00029 26967 1 G A scaffold26138 ScafM SNP 0008.scaffold00029 26989 1 A G scaffold26138 Both SNP 0008.scaffold00029 27018 1 C G scaffold26138 ScafM SNP 0008.scaffold00029 27203 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 27208 1 C A scaffold26138 ScafM SNP 0008.scaffold00029 27221 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 27230 1 G A scaffold26138 ScafM SNP 0008.scaffold00029 27236 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 27243 1 A T scaffold26138 ScafM SNP 0008.scaffold00029 27247 1 A T scaffold26138 ScafM SNP 0008.scaffold00029 27249 1 T G scaffold26138 ScafM SNP 0008.scaffold00029 27292 1 A C scaffold26138 ScafM SNP 0008.scaffold00029 27298 1 A G scaffold26138 ScafM SNP 0008.scaffold00029 27334 1 C A scaffold26138 ScafM SNP 0008.scaffold00029 27355 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 27384 1 A T scaffold26138 ScafM INDEL 0008.scaffold00029 27397 1 . A scaffold26138 ScafM SNP 0008.scaffold00029 27410 1 G C scaffold26138 ScafM SNP 0008.scaffold00029 27419 1 T C scaffold26138 ScafM INDEL 0008.scaffold00029 27448 1 . A scaffold26138 ScafM INDEL 0008.scaffold00029 28135 1 G . scaffold26138 ScafM SNP 0008.scaffold00029 28181 1 A C scaffold26138 ScafM SNP 0008.scaffold00029 28185 1 G C scaffold26138 ScafM SNP 0008.scaffold00029 28210 1 T G scaffold26138 ScafM SNP 0008.scaffold00029 28452 1 T C scaffold26138 ReadM SNP 0008.scaffold00029 28949 1 A T - ReadM SNP 0008.scaffold00029 28955 1 A T - ScafM SNP 0008.scaffold00029 29062 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 29068 1 G T scaffold26138 ScafM SNP 0008.scaffold00029 29101 1 C A scaffold26138 ScafM INDEL 0008.scaffold00029 29119 1 . T scaffold26138 ReadM INDEL 0008.scaffold00029 29410 2 .. TT - ReadM SNP 0008.scaffold00029 29437 1 G A - Both SNP 0008.scaffold00029 29541 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 29691 1 C G scaffold26138 ScafM INDEL 0008.scaffold00029 29735 6 ...... TACTAA scaffold26138 ScafM INDEL 0008.scaffold00029 29737 2 .. AA scaffold26138 ScafM INDEL 0008.scaffold00029 29769 1 T . scaffold26138 ScafM SNP 0008.scaffold00029 29809 1 G C scaffold26138 ScafM SNP 0008.scaffold00029 29822 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 29849 1 C T scaffold26138 Both SNP 0008.scaffold00029 29942 1 C A scaffold26138 Both SNP 0008.scaffold00029 29977 1 C T scaffold26138 Both SNP 0008.scaffold00029 29999 1 T C scaffold26138 ReadM SNP 0008.scaffold00029 30070 1 C T - ReadM SNP 0008.scaffold00029 30106 1 T C - ScafM SNP 0008.scaffold00029 30132 1 T A scaffold26138 ScafM SNP 0008.scaffold00029 30135 1 A G scaffold26138 ScafM SNP 0008.scaffold00029 30139 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 30152 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 30176 1 A G scaffold26138 Both SNP 0008.scaffold00029 30225 1 A T scaffold26138 ScafM SNP 0008.scaffold00029 30259 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 30286 1 A G scaffold26138 ScafM SNP 0008.scaffold00029 30289 1 A G scaffold26138 Both SNP 0008.scaffold00029 30324 1 T C scaffold26138 ScafM SNP 0008.scaffold00029 30407 1 C T scaffold26138 ScafM INDEL 0008.scaffold00029 30460 2 .. AG scaffold26138 ScafM SNP 0008.scaffold00029 30500 1 C T scaffold26138 ScafM SNP 0008.scaffold00029 30636 1 T G scaffold26138 ScafM SNP 0008.scaffold00029 30662 1 T G scaffold26138 ScafM SNP 0008.scaffold00029 31505 1 A G scaffold639 ScafM SNP 0008.scaffold00029 34957 1 C G scaffold3160 ScafM SNP 0008.scaffold00029 34967 1 A G scaffold3160 ScafM SNP 0008.scaffold00029 34970 1 T A scaffold3160 ScafM SNP 0008.scaffold00029 34976 1 C A scaffold3160 ScafM SNP 0008.scaffold00029 34985 1 G A scaffold3160 ScafM INDEL 0008.scaffold00029 35020 1 A . scaffold3160 ScafM SNP 0008.scaffold00029 35028 1 T C scaffold3160 ScafM INDEL 0008.scaffold00029 35090 2 CC .. scaffold3160 ScafM SNP 0008.scaffold00029 35104 1 C T scaffold3160 ScafM SNP 0008.scaffold00029 35114 1 T C scaffold3160 ScafM INDEL 0008.scaffold00029 35129 6 ...... TCACCT scaffold3160 ScafM INDEL 0008.scaffold00029 35133 5 ..... CGACG scaffold3160 ScafM SNP 0008.scaffold00029 35210 1 C T scaffold3160 ScafM SNP 0008.scaffold00029 35245 1 G A scaffold3160 ScafM SNP 0008.scaffold00029 35573 1 G T scaffold3160 ScafM SNP 0008.scaffold00029 35583 1 T G scaffold3160 ScafM SNP 0008.scaffold00029 35596 1 G T scaffold3160 ScafM INDEL 0008.scaffold00029 35609 5 TTGGG ..... scaffold3160 ScafM SNP 0008.scaffold00029 35713 1 G A scaffold3160 ScafM SNP 0008.scaffold00029 35747 1 T C scaffold3160 ScafM SNP 0008.scaffold00029 35764 1 G A scaffold3160 ScafM SNP 0008.scaffold00029 35770 1 C T scaffold3160 ScafM SNP 0008.scaffold00029 35805 1 T C scaffold3160 ScafM SNP 0008.scaffold00029 35812 1 T A scaffold3160 ScafM SNP 0008.scaffold00029 35814 1 T A scaffold3160 ScafM SNP 0008.scaffold00029 35932 1 A G scaffold3160 ScafM SNP 0008.scaffold00029 35979 1 G T scaffold3160 ScafM SNP 0008.scaffold00029 35987 1 C G scaffold3160 ScafM SNP 0008.scaffold00029 36026 1 C T scaffold3160 ReadM SNP 0008.scaffold00029 36884 1 T A - ReadM SNP 0008.scaffold00029 36904 1 A C - ScafM INDEL 0008.scaffold00029 37018 1 . C scaffold639 ScafM SNP 0008.scaffold00029 37024 1 T C scaffold639 ScafM SNP 0008.scaffold00029 37046 1 G C scaffold639 ScafM SNP 0008.scaffold00029 37083 1 C T scaffold639 ReadM SNP 0008.scaffold00029 37494 1 G A - ReadM SNP 0008.scaffold00029 38134 1 G A - ReadM SNP 0008.scaffold00029 38150 1 C T - ReadM SNP 0008.scaffold00029 38162 1 G A - ReadM SNP 0008.scaffold00029 38307 1 G C - ReadM SNP 0008.scaffold00029 38313 1 T A - ReadM SNP 0008.scaffold00029 38466 1 C T - ReadM SNP 0008.scaffold00029 38483 1 A C - Both SNP 0008.scaffold00029 38600 1 T G scaffold639 Both SNP 0008.scaffold00029 38649 1 T C scaffold639 Both SNP 0008.scaffold00029 38706 1 A G scaffold639 ScafM SNP 0008.scaffold00029 38799 1 G A scaffold639 ScafM SNP 0008.scaffold00029 38823 1 A T scaffold639 ScafM SNP 0008.scaffold00029 38826 1 A C scaffold639 ReadM SNP 0008.scaffold00029 38920 1 C A - ReadM SNP 0008.scaffold00029 39017 1 T C - ReadM SNP 0008.scaffold00029 39042 1 T C - ReadM SNP 0008.scaffold00029 39057 1 C T - Both SNP 0008.scaffold00029 54976 1 G A scaffold639 Both SNP 0008.scaffold00029 55021 1 T C scaffold639 Both SNP 0008.scaffold00029 55249 1 T C scaffold639 Both SNP 0008.scaffold00029 55306 1 T A scaffold639 Both SNP 0008.scaffold00029 55444 1 G T scaffold639 Both SNP 0008.scaffold00029 55463 1 C A scaffold639 ReadM INDEL 0008.scaffold00029 55655 1 . A - ScafM INDEL 0008.scaffold00029 55655 2 .T AC scaffold639 ScafM SNP 0008.scaffold00029 55853 1 A C scaffold639 Both INDEL 0008.scaffold00029 55858 2 AT .. scaffold639 Both SNP 0008.scaffold00029 56066 1 T C scaffold639 Both SNP 0008.scaffold00029 56076 1 C T scaffold639 ScafM SNP 0008.scaffold00029 56682 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 56833 1 . T scaffold639 ScafM SNP 0008.scaffold00029 56846 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 56853 5 TCTGA ..... scaffold639 ScafM SNP 0008.scaffold00029 57936 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 57947 1 A . scaffold639 ScafM SNP 0008.scaffold00029 57956 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 57964 1 C . scaffold639 ScafM SNP 0008.scaffold00029 57983 1 A T scaffold639 ScafM SNP 0008.scaffold00029 57985 1 T G scaffold639 ScafM SNP 0008.scaffold00029 57988 1 T C scaffold639 ScafM SNP 0008.scaffold00029 57999 1 C A scaffold639 ScafM SNP 0008.scaffold00029 58006 1 T C scaffold639 ScafM SNP 0008.scaffold00029 58036 1 A G scaffold639 ScafM SNP 0008.scaffold00029 58038 2 CA TG scaffold639 ScafM INDEL 0008.scaffold00029 58045 18 .................. CTTATATATTGTCCTCGC scaffold639 ScafM INDEL 0008.scaffold00029 58048 6 ...... TGTTGA scaffold639 ScafM INDEL 0008.scaffold00029 58052 3 ... TAA scaffold639 ScafM INDEL 0008.scaffold00029 58053 1 . C scaffold639 ScafM SNP 0008.scaffold00029 58055 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 58076 1 A . scaffold639 ScafM SNP 0008.scaffold00029 58097 1 C T scaffold639 ScafM SNP 0008.scaffold00029 58102 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 58123 1 . A scaffold639 ScafM SNP 0008.scaffold00029 58139 1 A G scaffold639 ScafM SNP 0008.scaffold00029 58142 1 A G scaffold639 ScafM SNP 0008.scaffold00029 58159 1 A G scaffold639 ScafM SNP 0008.scaffold00029 58163 1 G A scaffold639 ScafM SNP 0008.scaffold00029 58170 1 T C scaffold639 ScafM SNP 0008.scaffold00029 58557 1 C T scaffold639 ScafM SNP 0008.scaffold00029 58585 1 T C scaffold639 ScafM SNP 0008.scaffold00029 58594 1 A C scaffold639 ScafM SNP 0008.scaffold00029 58636 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 58681 1 . T scaffold639 Both SNP 0008.scaffold00029 58713 1 G A scaffold639 ScafM SNP 0008.scaffold00029 58827 1 C T scaffold639 ScafM SNP 0008.scaffold00029 58869 1 C T scaffold639 ScafM SNP 0008.scaffold00029 58876 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 58896 1 T . scaffold639 ScafM SNP 0008.scaffold00029 58902 1 A C scaffold639 ScafM SNP 0008.scaffold00029 58936 1 A G scaffold639 Both SNP 0008.scaffold00029 58966 1 T C scaffold639 Both SNP 0008.scaffold00029 59029 1 C T scaffold639 Both SNP 0008.scaffold00029 59052 1 T G scaffold639 ScafM SNP 0008.scaffold00029 59144 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 59146 1 T . scaffold639 ScafM SNP 0008.scaffold00029 59149 1 T G scaffold639 ScafM SNP 0008.scaffold00029 59179 2 AT TC scaffold639 Both SNP 0008.scaffold00029 59199 1 A G scaffold639 Both SNP 0008.scaffold00029 59244 1 C T scaffold639 Both SNP 0008.scaffold00029 59273 1 G A scaffold639 Both SNP 0008.scaffold00029 59316 1 A G scaffold639 Both SNP 0008.scaffold00029 59377 1 A T scaffold639 ScafM SNP 0008.scaffold00029 59514 1 A G scaffold639 Both SNP 0008.scaffold00029 59602 1 T C scaffold639 Both SNP 0008.scaffold00029 59885 1 T A scaffold639 Both SNP 0008.scaffold00029 60339 1 C A scaffold639 Both SNP 0008.scaffold00029 60436 1 G A scaffold639 Both INDEL 0008.scaffold00029 60453 1 A . scaffold639 Both SNP 0008.scaffold00029 60503 1 T C scaffold639 ScafM SNP 0008.scaffold00029 60773 2 TA GT scaffold639 ScafM SNP 0008.scaffold00029 60776 1 A T scaffold639 Both SNP 0008.scaffold00029 60856 1 G T scaffold639 Both SNP 0008.scaffold00029 60988 1 T C scaffold639 Both SNP 0008.scaffold00029 61139 1 C T scaffold639 ReadM SNP 0008.scaffold00029 61431 1 C T - Both SNP 0008.scaffold00029 61453 1 G A scaffold639 Both SNP 0008.scaffold00029 61460 1 G T scaffold639 ReadM INDEL 0008.scaffold00029 61994 1 A . - Both SNP 0008.scaffold00029 62099 1 T A scaffold639 ReadM SNP 0008.scaffold00029 62344 1 A G - ReadM SNP 0008.scaffold00029 62357 1 A G - ReadM SNP 0008.scaffold00029 62386 1 T C - ScafM SNP 0008.scaffold00029 62764 1 C T scaffold639 ScafM SNP 0008.scaffold00029 63031 1 A C scaffold639 ScafM SNP 0008.scaffold00029 63045 1 G A scaffold639 Both SNP 0008.scaffold00029 63072 1 A G scaffold639 Both SNP 0008.scaffold00029 63090 1 T C scaffold639 Both SNP 0008.scaffold00029 63258 1 C T scaffold639 ScafM SNP 0008.scaffold00029 63264 1 T G scaffold639 Both SNP 0008.scaffold00029 63286 1 G A scaffold639 Both SNP 0008.scaffold00029 63650 1 A G scaffold639 Both SNP 0008.scaffold00029 63669 1 G C scaffold639 Both SNP 0008.scaffold00029 63985 1 A G scaffold639 Both SNP 0008.scaffold00029 64111 1 A G scaffold639 Both SNP 0008.scaffold00029 64214 1 A G scaffold639 Both SNP 0008.scaffold00029 64415 1 T C scaffold639 Both SNP 0008.scaffold00029 64453 1 A T scaffold639 ScafM SNP 0008.scaffold00029 64549 1 T G scaffold639 ScafM SNP 0008.scaffold00029 64600 1 A G scaffold639 ScafM SNP 0008.scaffold00029 64806 1 T C scaffold639 Both SNP 0008.scaffold00029 64825 1 A T scaffold639 Both SNP 0008.scaffold00029 64855 1 C T scaffold639 Both SNP 0008.scaffold00029 64871 1 G A scaffold639 ScafM SNP 0008.scaffold00029 64951 1 G T scaffold639 ScafM INDEL 0008.scaffold00029 64952 4 .... ACCA scaffold639 ScafM SNP 0008.scaffold00029 64975 1 T C scaffold639 Both SNP 0008.scaffold00029 65070 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 65096 8 ........ CGTTTGTT scaffold639 Both SNP 0008.scaffold00029 65157 1 C T scaffold639 Both SNP 0008.scaffold00029 65238 1 C A scaffold639 Both SNP 0008.scaffold00029 65260 1 C T scaffold639 Both INDEL 0008.scaffold00029 65389 1 . T scaffold639 ScafM SNP 0008.scaffold00029 65398 1 G T scaffold639 Both SNP 0008.scaffold00029 65651 1 C T scaffold639 Both SNP 0008.scaffold00029 65784 2 AA TT scaffold639 Both SNP 0008.scaffold00029 65927 1 C T scaffold639 ReadM INDEL 0008.scaffold00029 66028 1 . T - Both INDEL 0008.scaffold00029 66184 1 G . scaffold639 Both SNP 0008.scaffold00029 66249 1 T A scaffold639 Both INDEL 0008.scaffold00029 66306 2 .. TG scaffold639 Both SNP 0008.scaffold00029 66423 2 AT GC scaffold639 Both SNP 0008.scaffold00029 66736 1 A C scaffold639 Both SNP 0008.scaffold00029 66870 1 T C scaffold639 Both SNP 0008.scaffold00029 67034 1 C T scaffold639 Both SNP 0008.scaffold00029 67075 1 A T scaffold639 Both INDEL 0008.scaffold00029 67226 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 67330 7 CAGCTAT ....... scaffold639 ScafM SNP 0008.scaffold00029 67465 1 T C scaffold639 ReadM SNP 0008.scaffold00029 67656 1 C G - ReadM SNP 0008.scaffold00029 67675 1 C T - ReadM SNP 0008.scaffold00029 67771 1 A T - ReadM SNP 0008.scaffold00029 67780 1 A C - Both SNP 0008.scaffold00029 67890 1 T C scaffold639 Both SNP 0008.scaffold00029 67902 1 T C scaffold639 Both SNP 0008.scaffold00029 67962 1 A G scaffold639 ReadM SNP 0008.scaffold00029 67996 1 C T - ReadM SNP 0008.scaffold00029 68234 1 C T - ReadM SNP 0008.scaffold00029 68339 1 G A - ReadM SNP 0008.scaffold00029 68465 1 G A - ReadM SNP 0008.scaffold00029 68552 1 A T - ScafM SNP 0008.scaffold00029 69628 1 A G scaffold639 ScafM SNP 0008.scaffold00029 69630 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 69658 11 ACAAAGAAGCA ........... scaffold639 ScafM SNP 0008.scaffold00029 69685 1 G T scaffold639 ScafM SNP 0008.scaffold00029 69713 1 C T scaffold639 ScafM SNP 0008.scaffold00029 69751 1 C G scaffold639 ScafM SNP 0008.scaffold00029 69763 1 A G scaffold639 Both SNP 0008.scaffold00029 69796 1 G A scaffold639 ScafM SNP 0008.scaffold00029 69931 1 T A scaffold639 Both SNP 0008.scaffold00029 70027 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 70478 7 ....... AGTGAGT scaffold639 Both SNP 0008.scaffold00029 70519 1 T G scaffold639 ReadM SNP 0008.scaffold00029 70651 1 T G - ReadM SNP 0008.scaffold00029 70742 1 T C - ReadM SNP 0008.scaffold00029 70782 1 A G - ScafM SNP 0008.scaffold00029 71500 1 A G scaffold639 Both SNP 0008.scaffold00029 71564 1 G A scaffold639 Both SNP 0008.scaffold00029 71595 1 G C scaffold639 ScafM SNP 0008.scaffold00029 71625 1 A T scaffold639 ScafM SNP 0008.scaffold00029 71645 1 A G scaffold639 ScafM SNP 0008.scaffold00029 71718 1 G C scaffold639 ScafM SNP 0008.scaffold00029 71735 1 A G scaffold639 ReadM SNP 0008.scaffold00029 74102 1 C T - Both SNP 0008.scaffold00029 75302 1 C A scaffold639 Both SNP 0008.scaffold00029 75612 1 T A scaffold639 ScafM SNP 0008.scaffold00029 75680 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 75687 2 .. GG scaffold639 ScafM SNP 0008.scaffold00029 75709 1 C T scaffold639 ScafM SNP 0008.scaffold00029 75718 1 A G scaffold639 ScafM SNP 0008.scaffold00029 75737 1 C T scaffold639 ScafM SNP 0008.scaffold00029 75746 1 T G scaffold639 ScafM SNP 0008.scaffold00029 75755 1 T C scaffold639 ScafM SNP 0008.scaffold00029 75778 1 A G scaffold639 ScafM SNP 0008.scaffold00029 75780 1 G A scaffold639 ScafM SNP 0008.scaffold00029 75788 1 T C scaffold639 ScafM SNP 0008.scaffold00029 75815 1 T C scaffold639 ScafM SNP 0008.scaffold00029 75826 1 G A scaffold639 Both SNP 0008.scaffold00029 75861 1 T G scaffold639 Both SNP 0008.scaffold00029 75876 1 T C scaffold639 Both SNP 0008.scaffold00029 75924 1 T C scaffold639 ScafM SNP 0008.scaffold00029 75969 1 G T scaffold639 ScafM SNP 0008.scaffold00029 75992 1 T A scaffold639 ScafM SNP 0008.scaffold00029 76014 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76019 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76065 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76083 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76091 1 C A scaffold639 ScafM INDEL 0008.scaffold00029 76102 6 ...... CACAGA scaffold639 ScafM SNP 0008.scaffold00029 76113 1 A G scaffold639 ScafM SNP 0008.scaffold00029 76202 2 TC GA scaffold639 ScafM SNP 0008.scaffold00029 76207 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 76211 2 .. TA scaffold639 ScafM SNP 0008.scaffold00029 76223 1 G A scaffold639 ScafM SNP 0008.scaffold00029 76262 1 G T scaffold639 ScafM SNP 0008.scaffold00029 76272 1 C A scaffold639 ScafM SNP 0008.scaffold00029 76275 1 A C scaffold639 ScafM SNP 0008.scaffold00029 76293 2 TT CC scaffold639 ScafM SNP 0008.scaffold00029 76306 1 A C scaffold639 ScafM SNP 0008.scaffold00029 76316 1 C G scaffold639 ScafM SNP 0008.scaffold00029 76321 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 76337 1 G . scaffold639 ScafM INDEL 0008.scaffold00029 76340 3 TCG ... scaffold639 ScafM SNP 0008.scaffold00029 76349 1 G C scaffold639 ScafM INDEL 0008.scaffold00029 76351 3 ... CTG scaffold639 ScafM SNP 0008.scaffold00029 76355 1 A C scaffold639 ScafM SNP 0008.scaffold00029 76374 1 G C scaffold639 ScafM INDEL 0008.scaffold00029 76404 1 A . scaffold639 ScafM SNP 0008.scaffold00029 76410 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76413 1 C A scaffold639 ScafM SNP 0008.scaffold00029 76418 1 G A scaffold639 ScafM SNP 0008.scaffold00029 76473 1 T G scaffold639 ScafM SNP 0008.scaffold00029 76475 1 G T scaffold639 Both SNP 0008.scaffold00029 76483 1 T A scaffold639 Both SNP 0008.scaffold00029 76544 1 A G scaffold639 Both SNP 0008.scaffold00029 76586 1 T C scaffold639 Both SNP 0008.scaffold00029 76593 1 C T scaffold639 ScafM SNP 0008.scaffold00029 76649 2 AG GA scaffold639 ScafM INDEL 0008.scaffold00029 76655 2 AT .. scaffold639 ScafM SNP 0008.scaffold00029 76679 1 T C scaffold639 ScafM SNP 0008.scaffold00029 76682 1 G A scaffold639 ScafM SNP 0008.scaffold00029 76685 1 C T scaffold639 ScafM SNP 0008.scaffold00029 76738 1 T A scaffold639 Both SNP 0008.scaffold00029 76784 1 T A scaffold639 ScafM SNP 0008.scaffold00029 76823 1 A G scaffold639 ScafM SNP 0008.scaffold00029 76828 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 76846 2 TT .. scaffold639 Both SNP 0008.scaffold00029 76861 1 A G scaffold639 Both SNP 0008.scaffold00029 76937 1 G A scaffold639 Both SNP 0008.scaffold00029 76984 1 T C scaffold639 ScafM SNP 0008.scaffold00029 77056 1 C T scaffold639 ScafM SNP 0008.scaffold00029 77058 1 C A scaffold639 ScafM SNP 0008.scaffold00029 77060 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 77121 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 77125 2 AA .C scaffold639 ScafM SNP 0008.scaffold00029 77130 4 AACA TCTT scaffold639 ScafM INDEL 0008.scaffold00029 77181 1 A . scaffold639 ScafM SNP 0008.scaffold00029 77196 1 G A scaffold639 ScafM SNP 0008.scaffold00029 77209 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 77217 1 . G scaffold639 ScafM SNP 0008.scaffold00029 77240 1 A T scaffold639 Both SNP 0008.scaffold00029 77272 1 G T scaffold639 Both SNP 0008.scaffold00029 77318 1 T G scaffold639 ScafM SNP 0008.scaffold00029 77368 1 C T scaffold639 ScafM SNP 0008.scaffold00029 77384 1 C T scaffold639 ScafM SNP 0008.scaffold00029 77391 1 T A scaffold639 ScafM SNP 0008.scaffold00029 77442 1 G A scaffold639 ScafM SNP 0008.scaffold00029 77454 1 G T scaffold639 ScafM SNP 0008.scaffold00029 77464 1 A T scaffold639 ScafM SNP 0008.scaffold00029 79027 1 A G scaffold639 ScafM SNP 0008.scaffold00029 79030 1 C A scaffold639 ScafM SNP 0008.scaffold00029 79040 1 C T scaffold639 ScafM SNP 0008.scaffold00029 79048 1 A C scaffold639 ScafM SNP 0008.scaffold00029 79052 1 C T scaffold639 ScafM SNP 0008.scaffold00029 79057 1 T C scaffold639 ScafM SNP 0008.scaffold00029 79073 1 A T scaffold639 ScafM SNP 0008.scaffold00029 79086 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 79096 1 . C scaffold639 ScafM SNP 0008.scaffold00029 79124 1 C T scaffold639 ScafM SNP 0008.scaffold00029 79126 1 A T scaffold639 ScafM SNP 0008.scaffold00029 79191 1 A T scaffold639 ScafM SNP 0008.scaffold00029 79198 1 T A scaffold639 ScafM SNP 0008.scaffold00029 79203 1 A T scaffold639 ScafM SNP 0008.scaffold00029 79220 1 A G scaffold639 ScafM SNP 0008.scaffold00029 79235 1 T G scaffold639 ScafM SNP 0008.scaffold00029 79240 1 T C scaffold639 ScafM SNP 0008.scaffold00029 79266 2 CA AG scaffold639 ScafM SNP 0008.scaffold00029 79282 1 G C scaffold639 ScafM SNP 0008.scaffold00029 79300 1 T C scaffold639 ScafM SNP 0008.scaffold00029 79334 2 GA AG scaffold639 ScafM INDEL 0008.scaffold00029 79339 2 GA .. scaffold639 ScafM SNP 0008.scaffold00029 79342 1 A G scaffold639 ScafM SNP 0008.scaffold00029 79354 1 G A scaffold639 ScafM SNP 0008.scaffold00029 79363 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 79364 4 .... TTTG scaffold639 ScafM SNP 0008.scaffold00029 79474 1 G T scaffold639 ScafM INDEL 0008.scaffold00029 79517 1 . T scaffold639 ScafM SNP 0008.scaffold00029 79522 1 T A scaffold639 Both SNP 0008.scaffold00029 79545 1 G A scaffold639 Both SNP 0008.scaffold00029 79605 1 A G scaffold639 Both SNP 0008.scaffold00029 79648 1 C T scaffold639 Both INDEL 0008.scaffold00029 79664 1 . C scaffold639 Both SNP 0008.scaffold00029 79744 1 G A scaffold639 Both SNP 0008.scaffold00029 79753 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 79777 25 GTAAGGGATCAACTTTTTGGGTTTC ......................... scaffold639 ScafM SNP 0008.scaffold00029 79821 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80172 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 80182 4 GTGC .... scaffold639 ScafM SNP 0008.scaffold00029 80212 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 80238 7 ACTGACC ....... scaffold639 ScafM SNP 0008.scaffold00029 80263 1 A G scaffold639 ScafM SNP 0008.scaffold00029 80314 1 C A scaffold639 ScafM SNP 0008.scaffold00029 80323 1 G T scaffold639 ScafM SNP 0008.scaffold00029 80333 1 T A scaffold639 ScafM SNP 0008.scaffold00029 80371 1 A G scaffold639 ScafM SNP 0008.scaffold00029 80373 1 G T scaffold639 ScafM SNP 0008.scaffold00029 80407 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 80417 6 CCTAGA ...... scaffold639 ScafM INDEL 0008.scaffold00029 80425 2 CC .. scaffold639 ScafM INDEL 0008.scaffold00029 80430 3 GGG ... scaffold639 ScafM INDEL 0008.scaffold00029 80434 1 G . scaffold639 ScafM SNP 0008.scaffold00029 80456 1 C G scaffold639 ScafM SNP 0008.scaffold00029 80468 1 C A scaffold639 ScafM SNP 0008.scaffold00029 80482 1 G A scaffold639 ScafM SNP 0008.scaffold00029 80492 1 C G scaffold639 ScafM SNP 0008.scaffold00029 80506 1 C T scaffold639 ScafM SNP 0008.scaffold00029 80509 1 C T scaffold639 ScafM SNP 0008.scaffold00029 80565 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80570 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 80572 1 T . scaffold639 ScafM SNP 0008.scaffold00029 80575 1 G C scaffold639 ScafM SNP 0008.scaffold00029 80583 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80591 1 C A scaffold639 ScafM INDEL 0008.scaffold00029 80607 1 T . scaffold639 ScafM INDEL 0008.scaffold00029 80609 1 G . scaffold639 ScafM SNP 0008.scaffold00029 80636 1 T G scaffold639 ScafM SNP 0008.scaffold00029 80640 1 G T scaffold639 ScafM SNP 0008.scaffold00029 80652 1 G A scaffold639 ScafM SNP 0008.scaffold00029 80666 1 G A scaffold639 ScafM SNP 0008.scaffold00029 80672 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80713 1 A G scaffold639 ScafM SNP 0008.scaffold00029 80716 2 TT AC scaffold639 ScafM SNP 0008.scaffold00029 80725 1 T G scaffold639 ScafM SNP 0008.scaffold00029 80739 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 80742 1 . T scaffold639 ScafM SNP 0008.scaffold00029 80752 1 C G scaffold639 ScafM SNP 0008.scaffold00029 80781 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 80801 1 . A scaffold639 ScafM SNP 0008.scaffold00029 80803 1 T A scaffold639 ScafM SNP 0008.scaffold00029 80817 1 T G scaffold639 ScafM SNP 0008.scaffold00029 80870 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80897 1 G A scaffold639 ScafM SNP 0008.scaffold00029 80899 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80907 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 80911 1 A . scaffold639 ScafM SNP 0008.scaffold00029 80923 1 T C scaffold639 ScafM SNP 0008.scaffold00029 80939 1 C A scaffold639 ScafM SNP 0008.scaffold00029 80991 1 C T scaffold639 ScafM SNP 0008.scaffold00029 80993 2 AG GA scaffold639 ScafM SNP 0008.scaffold00029 81001 1 G C scaffold639 ScafM SNP 0008.scaffold00029 81010 1 A G scaffold639 ScafM SNP 0008.scaffold00029 81012 1 A G scaffold639 ScafM SNP 0008.scaffold00029 81037 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81060 1 C A scaffold639 ScafM SNP 0008.scaffold00029 81075 1 G T scaffold639 ScafM INDEL 0008.scaffold00029 81080 1 A . scaffold639 ScafM SNP 0008.scaffold00029 81105 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81116 1 T C scaffold639 ScafM SNP 0008.scaffold00029 81138 1 C T scaffold639 ScafM SNP 0008.scaffold00029 81165 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 81173 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 81206 1 . A scaffold639 ScafM SNP 0008.scaffold00029 81212 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81232 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 81242 1 . T scaffold639 ScafM INDEL 0008.scaffold00029 81252 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 81260 2 .. TT scaffold639 ScafM SNP 0008.scaffold00029 81266 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81274 1 T A scaffold639 ScafM SNP 0008.scaffold00029 81279 3 AAG GGA scaffold639 ScafM SNP 0008.scaffold00029 81295 1 T G scaffold639 ScafM SNP 0008.scaffold00029 81308 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81314 1 G C scaffold639 ScafM SNP 0008.scaffold00029 81316 2 AT GC scaffold639 ScafM SNP 0008.scaffold00029 81329 1 C T scaffold639 ScafM SNP 0008.scaffold00029 81337 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81365 1 T C scaffold639 ScafM SNP 0008.scaffold00029 81378 1 C T scaffold639 ScafM SNP 0008.scaffold00029 81390 1 A G scaffold639 ScafM SNP 0008.scaffold00029 81444 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81453 1 T C scaffold639 ScafM SNP 0008.scaffold00029 81458 1 C T scaffold639 ScafM SNP 0008.scaffold00029 81468 1 T C scaffold639 ScafM SNP 0008.scaffold00029 81478 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81482 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 81488 1 . A scaffold639 ScafM SNP 0008.scaffold00029 81491 1 T A scaffold639 ScafM SNP 0008.scaffold00029 81493 1 G A scaffold639 ScafM SNP 0008.scaffold00029 81497 1 A G scaffold639 ScafM SNP 0008.scaffold00029 81543 1 G T scaffold639 ScafM SNP 0008.scaffold00029 81552 2 TC CT scaffold639 ScafM SNP 0008.scaffold00029 81565 1 A G scaffold639 ScafM SNP 0008.scaffold00029 81571 1 A C scaffold639 ScafM SNP 0008.scaffold00029 81589 1 C T scaffold639 ScafM SNP 0008.scaffold00029 81973 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 82003 2 .T GA scaffold639 ScafM SNP 0008.scaffold00029 82016 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82018 2 TA CG scaffold639 ScafM SNP 0008.scaffold00029 82026 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82029 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82041 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82048 1 G T scaffold639 ScafM SNP 0008.scaffold00029 82074 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 82096 1 . T scaffold639 ScafM SNP 0008.scaffold00029 82100 1 A T scaffold639 ScafM SNP 0008.scaffold00029 82106 1 G T scaffold639 ScafM SNP 0008.scaffold00029 82113 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82119 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82133 1 C A scaffold639 ScafM SNP 0008.scaffold00029 82143 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82177 2 CC TT scaffold639 ScafM SNP 0008.scaffold00029 82188 1 G T scaffold639 ScafM SNP 0008.scaffold00029 82202 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82207 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82217 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 82237 1 A . scaffold639 ScafM SNP 0008.scaffold00029 82246 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82281 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82287 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82297 1 A C scaffold639 ScafM SNP 0008.scaffold00029 82302 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82310 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82344 1 G C scaffold639 ScafM SNP 0008.scaffold00029 82369 1 C G scaffold639 ScafM SNP 0008.scaffold00029 82374 1 A T scaffold639 ScafM SNP 0008.scaffold00029 82386 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82394 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 82401 1 G . scaffold639 ScafM SNP 0008.scaffold00029 82407 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82409 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82418 1 G A scaffold639 ScafM SNP 0008.scaffold00029 82421 1 T G scaffold639 ScafM SNP 0008.scaffold00029 82425 1 A T scaffold639 ScafM SNP 0008.scaffold00029 82432 1 T C scaffold639 ScafM SNP 0008.scaffold00029 82437 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82447 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82451 1 G C scaffold639 ScafM SNP 0008.scaffold00029 82651 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82676 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 82681 1 T . scaffold639 ScafM SNP 0008.scaffold00029 82741 1 T A scaffold639 ScafM SNP 0008.scaffold00029 82761 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 82773 6 ...... TACTAC scaffold639 ScafM SNP 0008.scaffold00029 82792 1 G C scaffold639 ScafM SNP 0008.scaffold00029 82801 1 C T scaffold639 ScafM SNP 0008.scaffold00029 82824 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82834 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 82843 3 ... GGG scaffold639 ScafM SNP 0008.scaffold00029 82870 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82925 1 C A scaffold639 ScafM SNP 0008.scaffold00029 82941 1 G T scaffold639 ScafM SNP 0008.scaffold00029 82961 1 A G scaffold639 ScafM SNP 0008.scaffold00029 82965 2 CG TA scaffold639 ScafM SNP 0008.scaffold00029 82983 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 82998 6 AAAAAG ...... scaffold639 ScafM SNP 0008.scaffold00029 83011 1 G A scaffold639 ScafM SNP 0008.scaffold00029 83037 1 C G scaffold639 ScafM SNP 0008.scaffold00029 83056 1 C T scaffold639 ScafM SNP 0008.scaffold00029 83058 1 A C scaffold639 ScafM SNP 0008.scaffold00029 83066 1 C G scaffold639 ScafM SNP 0008.scaffold00029 83092 2 TT AG scaffold639 ScafM INDEL 0008.scaffold00029 83120 3 AAA ... scaffold639 ScafM SNP 0008.scaffold00029 83150 1 C T scaffold639 ScafM SNP 0008.scaffold00029 83177 1 A C scaffold639 ScafM SNP 0008.scaffold00029 83187 2 GG AA scaffold639 ScafM INDEL 0008.scaffold00029 83195 1 . A scaffold639 ScafM INDEL 0008.scaffold00029 83196 1 . A scaffold639 ScafM SNP 0008.scaffold00029 83205 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 83248 1 A . scaffold639 ScafM SNP 0008.scaffold00029 83271 1 T C scaffold639 ScafM SNP 0008.scaffold00029 83287 1 T C scaffold639 Both SNP 0008.scaffold00029 83307 1 G T scaffold639 Both SNP 0008.scaffold00029 83323 1 A C scaffold639 Both INDEL 0008.scaffold00029 83435 1 . T scaffold639 Both SNP 0008.scaffold00029 83452 1 G A scaffold639 Both SNP 0008.scaffold00029 83602 1 C A scaffold639 Both SNP 0008.scaffold00029 83665 1 T A scaffold639 Both SNP 0008.scaffold00029 83825 1 G T scaffold639 Both SNP 0008.scaffold00029 83834 1 G A scaffold639 ScafM SNP 0008.scaffold00029 83963 2 AC GT scaffold639 Both SNP 0008.scaffold00029 83999 1 T A scaffold639 Both SNP 0008.scaffold00029 84239 1 G A scaffold639 Both SNP 0008.scaffold00029 84355 1 G T scaffold639 Both INDEL 0008.scaffold00029 84357 1 A . scaffold639 Both SNP 0008.scaffold00029 84404 1 T G scaffold639 Both SNP 0008.scaffold00029 84427 1 G A scaffold639 Both SNP 0008.scaffold00029 84465 1 A G scaffold639 Both SNP 0008.scaffold00029 84542 1 G T scaffold639 Both SNP 0008.scaffold00029 84582 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 84625 1 . T scaffold639 ScafM SNP 0008.scaffold00029 84663 1 G A scaffold639 ScafM SNP 0008.scaffold00029 84679 3 CTA TGG scaffold639 ScafM SNP 0008.scaffold00029 84768 1 C A scaffold639 Both SNP 0008.scaffold00029 84868 1 C A scaffold639 ScafM SNP 0008.scaffold00029 84920 1 A G scaffold639 ScafM SNP 0008.scaffold00029 84928 1 T G scaffold639 ScafM SNP 0008.scaffold00029 84950 1 T G scaffold639 Both SNP 0008.scaffold00029 85002 1 G T scaffold639 Both SNP 0008.scaffold00029 85011 1 G T scaffold639 ScafM SNP 0008.scaffold00029 85074 1 T G scaffold639 ScafM SNP 0008.scaffold00029 85108 1 G C scaffold639 Both SNP 0008.scaffold00029 85132 1 A G scaffold639 Both SNP 0008.scaffold00029 85140 1 G A scaffold639 Both SNP 0008.scaffold00029 85200 1 C A scaffold639 Both SNP 0008.scaffold00029 85269 1 A T scaffold639 Both SNP 0008.scaffold00029 85495 1 T C scaffold639 Both SNP 0008.scaffold00029 85561 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 85615 8 AGGCTTTA ........ scaffold639 ScafM SNP 0008.scaffold00029 85641 1 G A scaffold639 Both SNP 0008.scaffold00029 85680 1 G C scaffold639 Both SNP 0008.scaffold00029 85743 1 C T scaffold639 Both SNP 0008.scaffold00029 85767 1 A T scaffold639 Both SNP 0008.scaffold00029 86289 1 A T scaffold639 Both SNP 0008.scaffold00029 86301 1 T G scaffold639 Both SNP 0008.scaffold00029 86318 1 C G scaffold639 Both SNP 0008.scaffold00029 86340 1 A G scaffold639 Both SNP 0008.scaffold00029 86357 1 T C scaffold639 Both SNP 0008.scaffold00029 86392 1 T C scaffold639 Both SNP 0008.scaffold00029 86446 2 GG AA scaffold639 Both SNP 0008.scaffold00029 86451 1 T C scaffold639 ScafM SNP 0008.scaffold00029 86512 1 A G scaffold639 ScafM SNP 0008.scaffold00029 86518 1 T C scaffold639 ScafM SNP 0008.scaffold00029 86544 1 T C scaffold639 ScafM SNP 0008.scaffold00029 86549 1 C A scaffold639 Both SNP 0008.scaffold00029 86615 1 T C scaffold639 Both SNP 0008.scaffold00029 86698 1 G T scaffold639 Both INDEL 0008.scaffold00029 86714 1 . A scaffold639 ScafM INDEL 0008.scaffold00029 86738 3 ACA ... scaffold639 Both INDEL 0008.scaffold00029 86766 1 A . scaffold639 Both SNP 0008.scaffold00029 86821 1 C T scaffold639 ScafM SNP 0008.scaffold00029 86844 1 C T scaffold639 ScafM SNP 0008.scaffold00029 86856 1 G A scaffold639 ScafM SNP 0008.scaffold00029 86875 1 G A scaffold639 ScafM SNP 0008.scaffold00029 86908 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 86912 1 . A scaffold639 ScafM SNP 0008.scaffold00029 86926 2 AC GT scaffold639 Both SNP 0008.scaffold00029 87013 1 A G scaffold639 Both SNP 0008.scaffold00029 87117 1 T G scaffold639 ReadM INDEL 0008.scaffold00029 87226 1 A . - ScafM INDEL 0008.scaffold00029 87226 2 AA .C scaffold639 ScafM SNP 0008.scaffold00029 87254 1 C A scaffold639 ScafM INDEL 0008.scaffold00029 87256 4 CCCC ...A scaffold639 ScafM SNP 0008.scaffold00029 87261 2 GG AA scaffold639 ScafM SNP 0008.scaffold00029 87268 1 A C scaffold639 ScafM SNP 0008.scaffold00029 87278 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 87286 1 A . scaffold639 Both SNP 0008.scaffold00029 87369 1 A G scaffold639 Both INDEL 0008.scaffold00029 87425 2 .. TG scaffold639 Both SNP 0008.scaffold00029 87610 1 G A scaffold639 Both SNP 0008.scaffold00029 87870 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 87903 8 ........ AGTCATAG scaffold639 ScafM SNP 0008.scaffold00029 87913 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 87924 2 .A GT scaffold639 ScafM SNP 0008.scaffold00029 87928 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 87937 7 GTACTAT ....... scaffold639 ScafM SNP 0008.scaffold00029 87970 1 A T scaffold639 ScafM SNP 0008.scaffold00029 87981 1 G A scaffold639 ScafM SNP 0008.scaffold00029 87983 1 G A scaffold639 ScafM SNP 0008.scaffold00029 87995 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 87996 1 . A scaffold639 ScafM SNP 0008.scaffold00029 88006 1 A G scaffold639 ScafM SNP 0008.scaffold00029 88025 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88028 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88044 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88052 1 T G scaffold639 ScafM SNP 0008.scaffold00029 88085 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88112 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88123 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88127 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88131 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88134 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88140 1 A G scaffold639 ScafM SNP 0008.scaffold00029 88144 2 AG GA scaffold639 ScafM SNP 0008.scaffold00029 88179 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 88198 8 ........ TTTACAAG scaffold639 ScafM SNP 0008.scaffold00029 88215 2 AG GA scaffold639 Both SNP 0008.scaffold00029 88248 1 A G scaffold639 Both SNP 0008.scaffold00029 88256 1 C T scaffold639 Both SNP 0008.scaffold00029 88320 1 A C scaffold639 Both INDEL 0008.scaffold00029 88345 1 G . scaffold639 Both SNP 0008.scaffold00029 88359 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88377 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88379 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88405 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88436 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88439 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88459 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 88461 1 . A scaffold639 ScafM SNP 0008.scaffold00029 88466 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88517 1 G C scaffold639 ScafM INDEL 0008.scaffold00029 88539 4 AATG .... scaffold639 ScafM SNP 0008.scaffold00029 88549 1 T C scaffold639 ScafM SNP 0008.scaffold00029 88564 1 G T scaffold639 ScafM SNP 0008.scaffold00029 88582 1 T G scaffold639 ScafM SNP 0008.scaffold00029 88596 2 GC AA scaffold639 ScafM SNP 0008.scaffold00029 88621 1 C T scaffold639 ScafM SNP 0008.scaffold00029 88629 1 G A scaffold639 ScafM SNP 0008.scaffold00029 88694 1 A G scaffold639 ScafM SNP 0008.scaffold00029 88698 1 T A scaffold639 ScafM SNP 0008.scaffold00029 88708 1 G A scaffold639 Both SNP 0008.scaffold00029 88789 1 G A scaffold639 Both SNP 0008.scaffold00029 88801 1 T C scaffold639 Both SNP 0008.scaffold00029 88841 1 A G scaffold639 ScafM SNP 0008.scaffold00029 88866 1 A G scaffold639 ReadM SNP 0008.scaffold00029 89579 1 C T - ReadM SNP 0008.scaffold00029 89587 1 A G - ScafM SNP 0008.scaffold00029 89662 1 A C scaffold639 ScafM SNP 0008.scaffold00029 89665 1 A T scaffold639 ScafM SNP 0008.scaffold00029 89668 1 T A scaffold639 ScafM SNP 0008.scaffold00029 89670 1 C T scaffold639 ScafM SNP 0008.scaffold00029 89677 1 T C scaffold639 ScafM SNP 0008.scaffold00029 89691 1 T C scaffold639 ScafM SNP 0008.scaffold00029 89703 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 89709 2 AA .T scaffold639 ScafM SNP 0008.scaffold00029 89721 1 C T scaffold639 ScafM SNP 0008.scaffold00029 89745 1 T C scaffold639 ScafM SNP 0008.scaffold00029 89757 1 T C scaffold639 ScafM SNP 0008.scaffold00029 89761 1 C A scaffold639 ScafM SNP 0008.scaffold00029 89821 1 A G scaffold639 ScafM SNP 0008.scaffold00029 89849 1 T C scaffold639 ScafM SNP 0008.scaffold00029 89865 1 T G scaffold639 ScafM SNP 0008.scaffold00029 89881 1 A C scaffold639 ScafM SNP 0008.scaffold00029 89887 1 G C scaffold639 ScafM SNP 0008.scaffold00029 89889 1 T C scaffold639 ScafM SNP 0008.scaffold00029 90349 1 T C scaffold639 ScafM SNP 0008.scaffold00029 90356 4 CCCT TTGA scaffold639 ScafM SNP 0008.scaffold00029 90399 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 90412 1 . A scaffold639 ScafM SNP 0008.scaffold00029 90432 1 T G scaffold639 ScafM SNP 0008.scaffold00029 90435 1 C T scaffold639 ScafM SNP 0008.scaffold00029 90447 1 G A scaffold639 ScafM SNP 0008.scaffold00029 90484 1 A G scaffold639 ScafM SNP 0008.scaffold00029 90513 1 C T scaffold639 ScafM SNP 0008.scaffold00029 90522 1 G A scaffold639 ScafM SNP 0008.scaffold00029 93284 1 T A scaffold6959 ScafM SNP 0008.scaffold00029 93360 1 A C scaffold6959 ScafM SNP 0008.scaffold00029 93430 1 T C scaffold6959 ScafM SNP 0008.scaffold00029 93467 1 C G scaffold6959 ScafM SNP 0008.scaffold00029 93712 1 A C scaffold6959 ScafM SNP 0008.scaffold00029 93779 1 A T scaffold6959 ScafM SNP 0008.scaffold00029 93807 1 C T scaffold6959 ScafM SNP 0008.scaffold00029 93862 1 A C scaffold6959 ScafM SNP 0008.scaffold00029 93960 1 T C scaffold6959 ScafM SNP 0008.scaffold00029 94023 1 T C scaffold6959 ScafM SNP 0008.scaffold00029 94066 1 A G scaffold6959 ScafM SNP 0008.scaffold00029 94240 1 G C scaffold6959 ScafM SNP 0008.scaffold00029 94293 1 G A scaffold6959 ScafM SNP 0008.scaffold00029 94295 1 T C scaffold6959 ScafM SNP 0008.scaffold00029 94298 1 A G scaffold6959 ScafM SNP 0008.scaffold00029 94305 1 A G scaffold6959 ScafM SNP 0008.scaffold00029 94462 1 A T scaffold6959 ScafM INDEL 0008.scaffold00029 94536 1 T . scaffold19282 ScafM SNP 0008.scaffold00029 94616 1 A G scaffold19282 ScafM SNP 0008.scaffold00029 94683 1 T C scaffold19282 ScafM SNP 0008.scaffold00029 94715 1 A C scaffold19282 ScafM SNP 0008.scaffold00029 94732 1 G A scaffold19282 ScafM SNP 0008.scaffold00029 111867 1 G A scaffold639 ScafM SNP 0008.scaffold00029 111873 1 C T scaffold639 ScafM SNP 0008.scaffold00029 111886 1 C T scaffold639 ScafM SNP 0008.scaffold00029 111905 1 A G scaffold639 ScafM SNP 0008.scaffold00029 111924 1 G A scaffold639 ScafM SNP 0008.scaffold00029 111938 1 T C scaffold639 ScafM SNP 0008.scaffold00029 111941 1 C A scaffold639 ScafM SNP 0008.scaffold00029 111955 2 AC TT scaffold639 ScafM SNP 0008.scaffold00029 111981 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112015 1 A T scaffold639 ScafM SNP 0008.scaffold00029 112042 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112044 2 CT TC scaffold639 ScafM SNP 0008.scaffold00029 112057 1 G T scaffold639 ScafM SNP 0008.scaffold00029 112059 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112086 1 C T scaffold639 ScafM SNP 0008.scaffold00029 112097 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112099 1 T A scaffold639 ScafM SNP 0008.scaffold00029 112125 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 112148 1 . T scaffold639 ScafM SNP 0008.scaffold00029 112150 1 A T scaffold639 ScafM SNP 0008.scaffold00029 112187 1 G T scaffold639 ScafM SNP 0008.scaffold00029 112205 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112211 2 AT CC scaffold639 ScafM SNP 0008.scaffold00029 112219 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112221 1 C T scaffold639 ScafM SNP 0008.scaffold00029 112250 1 G A scaffold639 ScafM SNP 0008.scaffold00029 112533 1 G A scaffold639 ScafM SNP 0008.scaffold00029 112536 1 G C scaffold639 ScafM SNP 0008.scaffold00029 112539 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112583 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112588 1 C A scaffold639 ScafM SNP 0008.scaffold00029 112624 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112663 2 TA AT scaffold639 ScafM SNP 0008.scaffold00029 112702 1 G A scaffold639 ScafM SNP 0008.scaffold00029 112722 1 C T scaffold639 ScafM SNP 0008.scaffold00029 112727 1 T A scaffold639 ScafM SNP 0008.scaffold00029 112752 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112761 1 G A scaffold639 ScafM SNP 0008.scaffold00029 112778 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112790 1 G C scaffold639 ScafM SNP 0008.scaffold00029 112792 1 C T scaffold639 ScafM SNP 0008.scaffold00029 112826 1 G A scaffold639 ScafM SNP 0008.scaffold00029 112829 1 A C scaffold639 ScafM SNP 0008.scaffold00029 112858 1 A T scaffold639 ScafM SNP 0008.scaffold00029 112877 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112884 1 C T scaffold639 ScafM SNP 0008.scaffold00029 112899 1 A T scaffold639 ScafM SNP 0008.scaffold00029 112903 1 T C scaffold639 ScafM SNP 0008.scaffold00029 112914 1 C A scaffold639 ScafM SNP 0008.scaffold00029 112924 2 GC AA scaffold639 ScafM SNP 0008.scaffold00029 112977 1 G T scaffold639 ScafM SNP 0008.scaffold00029 112984 2 TA CT scaffold639 ScafM SNP 0008.scaffold00029 112989 1 A G scaffold639 ScafM SNP 0008.scaffold00029 112996 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113006 1 T C scaffold639 ScafM SNP 0008.scaffold00029 113013 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113016 1 T G scaffold639 ScafM SNP 0008.scaffold00029 113023 1 G A scaffold639 ReadM SNP 0008.scaffold00029 113165 1 A G - Both SNP 0008.scaffold00029 113188 1 A C scaffold639 Both SNP 0008.scaffold00029 113242 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 113263 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 113266 3 AAC ... scaffold639 ScafM SNP 0008.scaffold00029 113271 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 113273 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 113277 1 C . scaffold639 ScafM INDEL 0008.scaffold00029 113279 1 C . scaffold639 ScafM SNP 0008.scaffold00029 113282 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 113285 5 TTTTT ..... scaffold639 ScafM SNP 0008.scaffold00029 113292 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 113296 4 TTCA ...G scaffold639 ScafM INDEL 0008.scaffold00029 113304 4 ACAA .... scaffold639 ScafM SNP 0008.scaffold00029 113310 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 113313 2 CA .. scaffold639 ScafM SNP 0008.scaffold00029 113355 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 113381 2 .. TT scaffold639 ScafM SNP 0008.scaffold00029 113388 1 G A scaffold639 ScafM SNP 0008.scaffold00029 113422 1 G C scaffold639 ScafM SNP 0008.scaffold00029 113439 1 T A scaffold639 ScafM SNP 0008.scaffold00029 113456 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113465 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113499 1 A C scaffold639 ScafM SNP 0008.scaffold00029 113529 2 GA TG scaffold639 ScafM SNP 0008.scaffold00029 113536 1 T C scaffold639 ScafM SNP 0008.scaffold00029 113548 1 C A scaffold639 ScafM SNP 0008.scaffold00029 113558 1 T G scaffold639 ScafM SNP 0008.scaffold00029 113563 1 T C scaffold639 ScafM SNP 0008.scaffold00029 113579 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 113588 1 . T scaffold639 Both INDEL 0008.scaffold00029 113685 2 .. AG scaffold639 Both SNP 0008.scaffold00029 113715 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113777 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113792 1 G A scaffold639 ScafM SNP 0008.scaffold00029 113799 1 C G scaffold639 ScafM SNP 0008.scaffold00029 113803 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 113858 1 . A scaffold639 ScafM SNP 0008.scaffold00029 113861 1 A T scaffold639 ScafM SNP 0008.scaffold00029 113867 1 A T scaffold639 ScafM SNP 0008.scaffold00029 113876 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113879 1 A G scaffold639 ScafM SNP 0008.scaffold00029 113976 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 113983 1 G . scaffold639 ScafM SNP 0008.scaffold00029 114000 1 T C scaffold639 ScafM SNP 0008.scaffold00029 114031 1 A G scaffold639 ScafM SNP 0008.scaffold00029 114034 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 114081 3 TTT ... scaffold639 ScafM INDEL 0008.scaffold00029 114107 2 TT .. scaffold639 ScafM SNP 0008.scaffold00029 114117 1 A G scaffold639 ScafM SNP 0008.scaffold00029 114146 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 114172 3 ATA ... scaffold639 ScafM INDEL 0008.scaffold00029 114176 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 114208 1 . A scaffold639 ScafM SNP 0008.scaffold00029 114210 1 T C scaffold639 ScafM SNP 0008.scaffold00029 114227 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 114237 1 . T scaffold639 ScafM SNP 0008.scaffold00029 114463 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 114479 1 A . scaffold639 ScafM SNP 0008.scaffold00029 114493 1 G A scaffold639 ScafM SNP 0008.scaffold00029 114507 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 114510 1 T . scaffold639 ScafM SNP 0008.scaffold00029 114545 1 G A scaffold639 ScafM SNP 0008.scaffold00029 114553 1 A G scaffold639 ScafM SNP 0008.scaffold00029 114574 1 C T scaffold639 ScafM SNP 0008.scaffold00029 114638 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 114641 4 GATG .... scaffold639 ScafM SNP 0008.scaffold00029 114657 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 114693 1 . A scaffold639 ScafM SNP 0008.scaffold00029 114695 1 T C scaffold639 ScafM SNP 0008.scaffold00029 114762 1 G T scaffold639 ScafM SNP 0008.scaffold00029 114767 1 A G scaffold639 ScafM SNP 0008.scaffold00029 114793 1 G A scaffold639 ScafM SNP 0008.scaffold00029 114802 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 116155 3 ..C AAA scaffold5787 ScafM SNP 0008.scaffold00029 116163 1 G C scaffold5787 ScafM SNP 0008.scaffold00029 116176 1 C A scaffold5787 ScafM SNP 0008.scaffold00029 116186 1 T C scaffold5787 ScafM INDEL 0008.scaffold00029 116191 3 TTT ... scaffold5787 ScafM SNP 0008.scaffold00029 116203 2 AC GT scaffold5787 ScafM SNP 0008.scaffold00029 116235 1 T G scaffold5787 ScafM SNP 0008.scaffold00029 116240 1 A C scaffold5787 ScafM SNP 0008.scaffold00029 116252 1 G A scaffold5787 ScafM SNP 0008.scaffold00029 116334 1 C G scaffold5787 ScafM SNP 0008.scaffold00029 116342 1 A T scaffold5787 ScafM SNP 0008.scaffold00029 116344 1 G A scaffold5787 ScafM SNP 0008.scaffold00029 116352 1 T A scaffold5787 ScafM INDEL 0008.scaffold00029 122879 1 . A scaffold639 ScafM SNP 0008.scaffold00029 122882 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 122887 4 AATT .... scaffold639 ScafM SNP 0008.scaffold00029 122904 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 122928 1 . A scaffold639 ScafM SNP 0008.scaffold00029 122947 1 A G scaffold639 ScafM SNP 0008.scaffold00029 122990 1 T A scaffold639 ScafM SNP 0008.scaffold00029 123009 1 C T scaffold639 ScafM SNP 0008.scaffold00029 123013 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 123042 2 .. AC scaffold639 ScafM SNP 0008.scaffold00029 123164 1 A G scaffold639 ScafM SNP 0008.scaffold00029 123178 1 G T scaffold639 ScafM SNP 0008.scaffold00029 123191 2 TA AC scaffold639 ScafM SNP 0008.scaffold00029 123222 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 123246 1 . T scaffold639 ScafM INDEL 0008.scaffold00029 123266 1 . A scaffold639 ScafM SNP 0008.scaffold00029 123274 1 T A scaffold639 ScafM SNP 0008.scaffold00029 123303 1 A T scaffold639 ScafM SNP 0008.scaffold00029 123335 1 G C scaffold639 ScafM SNP 0008.scaffold00029 123374 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 123394 2 AA .. scaffold639 ScafM INDEL 0008.scaffold00029 123400 9 CCGCATTTT ......... scaffold639 ScafM INDEL 0008.scaffold00029 123410 3 AAG ... scaffold639 ScafM INDEL 0008.scaffold00029 123415 5 ATTAA ..... scaffold639 ScafM INDEL 0008.scaffold00029 123422 1 T . scaffold639 ScafM INDEL 0008.scaffold00029 123425 1 G . scaffold639 ScafM INDEL 0008.scaffold00029 123427 2 CT .. scaffold639 ScafM INDEL 0008.scaffold00029 123430 6 AGAAAA ...... scaffold639 ScafM SNP 0008.scaffold00029 123443 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 123476 2 .. TG scaffold639 ScafM INDEL 0008.scaffold00029 123478 1 . G scaffold639 ScafM SNP 0008.scaffold00029 123499 1 T C scaffold639 ScafM SNP 0008.scaffold00029 123506 1 G A scaffold639 ScafM SNP 0008.scaffold00029 123523 1 G A scaffold639 ScafM SNP 0008.scaffold00029 123535 1 T A scaffold639 Both SNP 0008.scaffold00029 123664 1 T C scaffold639 Both SNP 0008.scaffold00029 123802 1 T G scaffold639 Both SNP 0008.scaffold00029 124042 1 T C scaffold639 Both SNP 0008.scaffold00029 124553 1 T A scaffold639 ScafM SNP 0008.scaffold00029 124663 1 A T scaffold639 ScafM SNP 0008.scaffold00029 124691 1 A T scaffold639 Both SNP 0008.scaffold00029 124735 1 A T scaffold639 Both SNP 0008.scaffold00029 125058 1 G A scaffold639 Both SNP 0008.scaffold00029 125087 1 A T scaffold639 Both SNP 0008.scaffold00029 125128 1 C T scaffold639 ReadM SNP 0008.scaffold00029 125512 1 C T - ScafM INDEL 0008.scaffold00029 125731 7 ....... TCTGTGG scaffold639 ScafM INDEL 0008.scaffold00029 125758 32 ................................ TATCTTAAGGGTGTGGGTTTTAAAAAGGAGTA scaffold639 ReadM INDEL 0008.scaffold00029 125882 1 T . - ScafM INDEL 0008.scaffold00029 125882 2 TA .G scaffold639 ScafM INDEL 0008.scaffold00029 126092 1 . T scaffold639 ScafM INDEL 0008.scaffold00029 126127 1 G . scaffold639 Both SNP 0008.scaffold00029 126439 1 C T scaffold639 Both SNP 0008.scaffold00029 126441 1 A G scaffold639 ReadM SNP 0008.scaffold00029 126640 1 C A - ReadM SNP 0008.scaffold00029 127045 1 G A - Both SNP 0008.scaffold00029 127093 1 T C scaffold639 Both SNP 0008.scaffold00029 127196 1 C A scaffold639 Both SNP 0008.scaffold00029 127733 1 A G scaffold639 Both SNP 0008.scaffold00029 127963 1 C T scaffold639 Both SNP 0008.scaffold00029 128418 1 C G scaffold639 Both SNP 0008.scaffold00029 128812 1 T A scaffold639 Both SNP 0008.scaffold00029 129078 1 T C scaffold639 ScafM SNP 0008.scaffold00029 129217 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 129223 3 AGT ... scaffold639 ScafM INDEL 0008.scaffold00029 129326 27 ........................... TATCTGGGCATTAATGGATGGTTGGTG scaffold639 Both SNP 0008.scaffold00029 129392 1 T C scaffold639 Both SNP 0008.scaffold00029 129835 1 G T scaffold639 Both SNP 0008.scaffold00029 129872 1 G T scaffold639 ScafM SNP 0008.scaffold00029 129881 1 A C scaffold639 ScafM SNP 0008.scaffold00029 129890 1 T G scaffold639 ScafM SNP 0008.scaffold00029 129956 1 T C scaffold639 Both SNP 0008.scaffold00029 130067 1 G T scaffold639 Both SNP 0008.scaffold00029 130352 1 A T scaffold639 Both SNP 0008.scaffold00029 130518 1 A C scaffold639 Both SNP 0008.scaffold00029 130605 1 A G scaffold639 ScafM SNP 0008.scaffold00029 130634 1 A G scaffold639 Both SNP 0008.scaffold00029 130732 1 A G scaffold639 Both SNP 0008.scaffold00029 131219 1 A G scaffold639 Both SNP 0008.scaffold00029 131306 1 T C scaffold639 Both SNP 0008.scaffold00029 131634 1 T C scaffold639 Both SNP 0008.scaffold00029 131676 1 T G scaffold639 Both SNP 0008.scaffold00029 131696 1 A G scaffold639 ScafM SNP 0008.scaffold00029 131894 1 G A scaffold639 ScafM SNP 0008.scaffold00029 131907 1 G T scaffold639 ScafM INDEL 0008.scaffold00029 131951 15 ............... ATTATTATTATTAGG scaffold639 ScafM INDEL 0008.scaffold00029 132001 3 TCT ... scaffold639 ScafM SNP 0008.scaffold00029 132005 1 C A scaffold639 ScafM SNP 0008.scaffold00029 132066 1 T C scaffold639 ScafM SNP 0008.scaffold00029 132089 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 132104 1 T . scaffold639 ScafM INDEL 0008.scaffold00029 132156 1 . T scaffold639 ScafM SNP 0008.scaffold00029 132159 1 A C scaffold639 ScafM SNP 0008.scaffold00029 132171 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 132175 2 AG .. scaffold639 ScafM SNP 0008.scaffold00029 132243 1 T A scaffold639 Both SNP 0008.scaffold00029 132408 1 A G scaffold639 Both SNP 0008.scaffold00029 132460 1 C T scaffold639 Both SNP 0008.scaffold00029 132591 1 C T scaffold639 Both SNP 0008.scaffold00029 132674 1 T C scaffold639 Both SNP 0008.scaffold00029 133247 1 G A scaffold639 Both SNP 0008.scaffold00029 133296 1 G C scaffold639 Both INDEL 0008.scaffold00029 133332 1 . T scaffold639 ReadM SNP 0008.scaffold00029 133506 1 G T - ReadM SNP 0008.scaffold00029 133511 1 A T - Both SNP 0008.scaffold00029 133719 1 G A scaffold639 ReadM SNP 0008.scaffold00029 133899 1 G A - ScafM SNP 0008.scaffold00029 133899 2 GG AA scaffold639 Both SNP 0008.scaffold00029 133984 1 T G scaffold639 Both SNP 0008.scaffold00029 134003 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 134041 9 ......... TTGAGGTGG scaffold639 Both SNP 0008.scaffold00029 134090 1 A G scaffold639 Both SNP 0008.scaffold00029 134102 1 G A scaffold639 Both SNP 0008.scaffold00029 134191 1 T A scaffold639 ScafM SNP 0008.scaffold00029 134227 2 CC TT scaffold639 Both SNP 0008.scaffold00029 134496 1 T C scaffold639 Both SNP 0008.scaffold00029 134794 1 G T scaffold639 Both SNP 0008.scaffold00029 135039 1 G A scaffold639 Both SNP 0008.scaffold00029 135423 1 A G scaffold639 Both SNP 0008.scaffold00029 135931 1 A T scaffold639 Both SNP 0008.scaffold00029 136020 1 C G scaffold639 Both INDEL 0008.scaffold00029 136722 1 G . scaffold639 Both SNP 0008.scaffold00029 136756 1 T C scaffold639 Both SNP 0008.scaffold00029 136789 1 G A scaffold639 Both SNP 0008.scaffold00029 136836 1 C T scaffold639 Both SNP 0008.scaffold00029 136902 1 A G scaffold639 Both INDEL 0008.scaffold00029 136977 1 . C scaffold639 Both SNP 0008.scaffold00029 137145 1 C T scaffold639 Both SNP 0008.scaffold00029 137270 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 137334 8 ........ AGTCTGAG scaffold639 ScafM SNP 0008.scaffold00029 137353 1 G A scaffold639 Both SNP 0008.scaffold00029 137388 1 C G scaffold639 Both SNP 0008.scaffold00029 137643 1 C T scaffold639 ScafM SNP 0008.scaffold00029 137701 1 T A scaffold639 Both SNP 0008.scaffold00029 138078 1 C T scaffold639 Both INDEL 0008.scaffold00029 138149 3 ... AAG scaffold639 ScafM SNP 0008.scaffold00029 138873 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 138877 1 . A scaffold639 ScafM SNP 0008.scaffold00029 139336 1 A G scaffold639 Both SNP 0008.scaffold00029 139410 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 139500 21 ..................... CTGGGGGGGGGGGGGGAGGGG scaffold639 ScafM INDEL 0008.scaffold00029 139504 1 . G scaffold639 Both SNP 0008.scaffold00029 139853 1 C T scaffold639 Both SNP 0008.scaffold00029 140184 1 G C scaffold639 Both SNP 0008.scaffold00029 140305 1 T A scaffold639 Both SNP 0008.scaffold00029 140570 1 A G scaffold639 Both SNP 0008.scaffold00029 140666 1 G A scaffold639 Both INDEL 0008.scaffold00029 140670 1 . A scaffold639 Both SNP 0008.scaffold00029 140762 1 C T scaffold639 Both SNP 0008.scaffold00029 140913 1 A G scaffold639 ReadM SNP 0008.scaffold00029 141010 1 T C - ReadM SNP 0008.scaffold00029 141071 1 T C - Both SNP 0008.scaffold00029 141205 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 141260 21 ..................... TTTCTTTTTCTTTTCTTTTTT scaffold639 ScafM INDEL 0008.scaffold00029 141341 1 . T scaffold639 ScafM SNP 0008.scaffold00029 141344 2 AC CT scaffold639 Both INDEL 0008.scaffold00029 141377 1 . A scaffold639 ScafM SNP 0008.scaffold00029 141384 1 A T scaffold639 ReadM SNP 0008.scaffold00029 141494 1 C T - Both SNP 0008.scaffold00029 141586 1 T C scaffold639 ReadM SNP 0008.scaffold00029 141920 1 C T - ReadM SNP 0008.scaffold00029 141940 1 G C - Both SNP 0008.scaffold00029 142063 1 C T scaffold639 Both SNP 0008.scaffold00029 142392 1 A C scaffold639 Both SNP 0008.scaffold00029 142721 1 G C scaffold639 Both SNP 0008.scaffold00029 142805 1 T C scaffold639 Both SNP 0008.scaffold00029 142840 1 T C scaffold639 Both SNP 0008.scaffold00029 142911 1 A G scaffold639 ReadM SNP 0008.scaffold00029 143342 1 G T - ReadM SNP 0008.scaffold00029 143945 1 A G - ReadM SNP 0008.scaffold00029 143983 1 T C - ReadM SNP 0008.scaffold00029 143986 1 C G - Both SNP 0008.scaffold00029 144292 1 A G scaffold639 ReadM INDEL 0008.scaffold00029 144379 2 AC .. - Both INDEL 0008.scaffold00029 144380 2 CT .. scaffold639 Both SNP 0008.scaffold00029 144563 1 C T scaffold639 Both INDEL 0008.scaffold00029 144642 1 T . scaffold639 Both INDEL 0008.scaffold00029 145589 1 . A scaffold639 Both SNP 0008.scaffold00029 145610 1 C T scaffold639 ScafM SNP 0008.scaffold00029 145723 1 T C scaffold639 Both SNP 0008.scaffold00029 145823 1 G A scaffold639 Both INDEL 0008.scaffold00029 145967 1 . C scaffold639 ReadM SNP 0008.scaffold00029 146141 1 G C - Both SNP 0008.scaffold00029 146704 1 A G scaffold639 Both SNP 0008.scaffold00029 146870 1 C T scaffold639 Both SNP 0008.scaffold00029 146933 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 147095 1 . T scaffold639 Both SNP 0008.scaffold00029 147232 1 A T scaffold639 Both SNP 0008.scaffold00029 147265 1 G T scaffold639 Both SNP 0008.scaffold00029 147623 1 C A scaffold639 ReadM SNP 0008.scaffold00029 148098 1 A G - ReadM INDEL 0008.scaffold00029 148132 1 . C - Both SNP 0008.scaffold00029 148318 1 A C scaffold639 Both SNP 0008.scaffold00029 148484 1 T C scaffold639 Both SNP 0008.scaffold00029 148626 1 G A scaffold639 Both SNP 0008.scaffold00029 148659 1 A T scaffold639 Both SNP 0008.scaffold00029 148756 1 C T scaffold639 ScafM SNP 0008.scaffold00029 148888 1 A C scaffold639 Both SNP 0008.scaffold00029 149103 1 A T scaffold639 Both SNP 0008.scaffold00029 149134 1 G A scaffold639 Both SNP 0008.scaffold00029 149490 1 G T scaffold639 Both SNP 0008.scaffold00029 149527 1 A G scaffold639 Both SNP 0008.scaffold00029 149815 1 G T scaffold639 Both SNP 0008.scaffold00029 149954 1 T C scaffold639 ScafM SNP 0008.scaffold00029 150089 1 C T scaffold639 Both SNP 0008.scaffold00029 150203 1 T C scaffold639 Both SNP 0008.scaffold00029 150358 1 G A scaffold639 ReadM SNP 0008.scaffold00029 150438 1 C T - Both SNP 0008.scaffold00029 150606 1 A C scaffold639 Both SNP 0008.scaffold00029 150726 1 C G scaffold639 Both SNP 0008.scaffold00029 150992 1 A T scaffold639 Both SNP 0008.scaffold00029 151017 1 C T scaffold639 ReadM SNP 0008.scaffold00029 151230 1 T C - ReadM SNP 0008.scaffold00029 151317 1 A G - ReadM INDEL 0008.scaffold00029 151355 2 AG .. - ScafM INDEL 0008.scaffold00029 152281 5 ..... ACTTT scaffold639 Both SNP 0008.scaffold00029 152443 1 C A scaffold639 ReadM SNP 0008.scaffold00029 152471 1 G A - ReadM SNP 0008.scaffold00029 152579 1 T C - ReadM SNP 0008.scaffold00029 152733 1 T C - ReadM SNP 0008.scaffold00029 152792 1 T C - ReadM SNP 0008.scaffold00029 152834 1 G A - Both SNP 0008.scaffold00029 152980 1 C T scaffold639 Both SNP 0008.scaffold00029 153075 1 C T scaffold639 Both SNP 0008.scaffold00029 153106 1 T C scaffold639 ReadM SNP 0008.scaffold00029 153137 1 T C - ReadM SNP 0008.scaffold00029 153145 1 C T - ReadM SNP 0008.scaffold00029 153266 1 T C - ReadM SNP 0008.scaffold00029 153919 1 G C - ReadM SNP 0008.scaffold00029 153941 1 T G - ReadM SNP 0008.scaffold00029 154118 1 G T - ReadM SNP 0008.scaffold00029 154120 1 A T - ScafM SNP 0008.scaffold00029 154223 1 G T scaffold639 ScafM SNP 0008.scaffold00029 154269 1 T A scaffold639 ScafM SNP 0008.scaffold00029 155373 1 A G scaffold639 Both SNP 0008.scaffold00029 155599 1 T C scaffold639 ScafM SNP 0008.scaffold00029 155617 1 C A scaffold639 ScafM SNP 0008.scaffold00029 155619 1 A C scaffold639 ReadM INDEL 0008.scaffold00029 155748 1 . T - ScafM INDEL 0008.scaffold00029 155756 2 .. TA scaffold639 Both SNP 0008.scaffold00029 155782 1 G A scaffold639 Both INDEL 0008.scaffold00029 155843 1 A . scaffold639 ReadM SNP 0008.scaffold00029 155934 1 A G - ScafM SNP 0008.scaffold00029 156119 2 AC CT scaffold639 Both SNP 0008.scaffold00029 156253 1 T C scaffold639 Both SNP 0008.scaffold00029 156317 1 T C scaffold639 ScafM SNP 0008.scaffold00029 156454 1 C T scaffold639 ScafM SNP 0008.scaffold00029 156551 1 T G scaffold639 ScafM SNP 0008.scaffold00029 156586 1 T G scaffold639 Both SNP 0008.scaffold00029 156621 1 C T scaffold639 Both SNP 0008.scaffold00029 156813 1 A G scaffold639 Both SNP 0008.scaffold00029 156854 1 A G scaffold639 Both SNP 0008.scaffold00029 157086 1 A G scaffold639 Both SNP 0008.scaffold00029 157125 2 AT CC scaffold639 Both SNP 0008.scaffold00029 157227 1 T C scaffold639 Both SNP 0008.scaffold00029 157461 1 C G scaffold639 ScafM SNP 0008.scaffold00029 157715 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 157737 6 CATCTT ...... scaffold639 Both SNP 0008.scaffold00029 157790 1 C T scaffold639 Both SNP 0008.scaffold00029 157878 1 A G scaffold639 Both SNP 0008.scaffold00029 157912 1 T C scaffold639 Both SNP 0008.scaffold00029 157991 1 G T scaffold639 Both SNP 0008.scaffold00029 158155 1 A G scaffold639 ScafM SNP 0008.scaffold00029 158250 1 A G scaffold639 ScafM SNP 0008.scaffold00029 158254 1 A G scaffold639 ScafM SNP 0008.scaffold00029 158258 1 C T scaffold639 ScafM SNP 0008.scaffold00029 158260 1 T C scaffold639 ScafM SNP 0008.scaffold00029 158306 1 A G scaffold639 Both SNP 0008.scaffold00029 158403 1 T A scaffold639 Both INDEL 0008.scaffold00029 158677 1 T . scaffold639 ReadM SNP 0008.scaffold00029 158836 2 GC AT - ReadM SNP 0008.scaffold00029 158859 1 T C - ReadM SNP 0008.scaffold00029 158931 1 A G - ReadM SNP 0008.scaffold00029 158976 1 G T - ReadM SNP 0008.scaffold00029 159112 1 C A - ReadM SNP 0008.scaffold00029 159147 1 A T - ReadM SNP 0008.scaffold00029 159164 1 G C - ReadM SNP 0008.scaffold00029 159254 1 T C - ScafM SNP 0008.scaffold00029 159297 1 T C scaffold639 ScafM SNP 0008.scaffold00029 159315 1 A C scaffold639 ScafM SNP 0008.scaffold00029 159342 1 G T scaffold639 ScafM SNP 0008.scaffold00029 159347 1 C A scaffold639 ScafM SNP 0008.scaffold00029 159373 1 C T scaffold639 Both SNP 0008.scaffold00029 168830 1 C G scaffold639 ReadM SNP 0008.scaffold00029 168893 1 A G - ReadM SNP 0008.scaffold00029 168899 1 A G - ReadM SNP 0008.scaffold00029 169089 1 G A - ReadM SNP 0008.scaffold00029 169248 1 C T - ReadM SNP 0008.scaffold00029 169271 1 C T - ReadM SNP 0008.scaffold00029 169712 1 C T - ScafM SNP 0008.scaffold00029 170090 1 T C scaffold639 ScafM SNP 0008.scaffold00029 170098 1 A C scaffold639 ScafM SNP 0008.scaffold00029 170215 1 A C scaffold639 ScafM SNP 0008.scaffold00029 170228 1 T G scaffold639 ScafM SNP 0008.scaffold00029 170237 1 C T scaffold639 ScafM SNP 0008.scaffold00029 170242 1 C T scaffold639 ScafM SNP 0008.scaffold00029 170244 1 A G scaffold639 Both SNP 0008.scaffold00029 170305 1 A G scaffold639 ScafM SNP 0008.scaffold00029 170478 1 T A scaffold639 ReadM SNP 0008.scaffold00029 170665 1 T A - ReadM SNP 0008.scaffold00029 170697 1 T C - ReadM SNP 0008.scaffold00029 170816 1 T G - ReadM SNP 0008.scaffold00029 170820 1 C G - ReadM SNP 0008.scaffold00029 171154 1 G A - ReadM SNP 0008.scaffold00029 171307 1 A G - ReadM SNP 0008.scaffold00029 171376 1 G T - ReadM SNP 0008.scaffold00029 171414 1 G A - ReadM SNP 0008.scaffold00029 171434 1 C A - ReadM SNP 0008.scaffold00029 171488 1 T C - ReadM SNP 0008.scaffold00029 171568 1 G T - ReadM SNP 0008.scaffold00029 171774 1 C T - ReadM SNP 0008.scaffold00029 171802 1 C T - Both SNP 0008.scaffold00029 171890 1 A T scaffold639 Both SNP 0008.scaffold00029 171931 1 T G scaffold639 ReadM SNP 0008.scaffold00029 172408 1 T C - ReadM SNP 0008.scaffold00029 172439 1 T A - ReadM SNP 0008.scaffold00029 172719 1 T C - ReadM SNP 0008.scaffold00029 172739 1 C A - ReadM SNP 0008.scaffold00029 172839 1 G C - ReadM SNP 0008.scaffold00029 172991 1 T G - ReadM SNP 0008.scaffold00029 173091 1 C T - ReadM SNP 0008.scaffold00029 173100 1 C T - ReadM SNP 0008.scaffold00029 173239 1 G A - ReadM SNP 0008.scaffold00029 173312 1 C T - ReadM SNP 0008.scaffold00029 173358 1 G A - ReadM SNP 0008.scaffold00029 173384 1 G A - ReadM INDEL 0008.scaffold00029 173405 2 TA .. - ReadM SNP 0008.scaffold00029 173580 1 C T - ReadM SNP 0008.scaffold00029 173611 1 T C - ReadM SNP 0008.scaffold00029 173654 1 A G - ReadM SNP 0008.scaffold00029 173815 1 T G - ReadM SNP 0008.scaffold00029 173820 1 A G - ReadM SNP 0008.scaffold00029 173851 1 G A - ReadM SNP 0008.scaffold00029 173978 1 G A - ReadM SNP 0008.scaffold00029 174251 1 C T - ReadM SNP 0008.scaffold00029 174269 1 T C - ReadM SNP 0008.scaffold00029 174659 1 C G - ReadM SNP 0008.scaffold00029 174663 1 C G - ReadM SNP 0008.scaffold00029 175560 1 T C - ReadM SNP 0008.scaffold00029 175605 1 A G - ReadM SNP 0008.scaffold00029 175723 1 G A - ReadM SNP 0008.scaffold00029 175879 1 G A - ReadM SNP 0008.scaffold00029 175890 1 A G - ReadM SNP 0008.scaffold00029 175942 1 A T - ReadM SNP 0008.scaffold00029 175982 1 A G - ReadM SNP 0008.scaffold00029 176038 1 T C - ReadM SNP 0008.scaffold00029 176060 1 C T - ReadM SNP 0008.scaffold00029 176261 1 G A - ReadM SNP 0008.scaffold00029 176313 1 G A - ReadM SNP 0008.scaffold00029 176529 1 T A - ReadM SNP 0008.scaffold00029 176578 1 G A - ReadM SNP 0008.scaffold00029 176636 1 C T - ReadM SNP 0008.scaffold00029 176655 1 A G - ReadM SNP 0008.scaffold00029 176802 1 G A - ReadM SNP 0008.scaffold00029 176849 1 A G - ReadM SNP 0008.scaffold00029 176853 1 T G - ReadM SNP 0008.scaffold00029 177001 1 T C - ReadM SNP 0008.scaffold00029 177154 1 C T - ReadM SNP 0008.scaffold00029 177200 1 G A - ScafM SNP 0008.scaffold00029 177289 1 T C scaffold639 Both SNP 0008.scaffold00029 177323 1 C T scaffold639 Both SNP 0008.scaffold00029 177820 1 A C scaffold639 Both SNP 0008.scaffold00029 177869 1 T C scaffold639 Both INDEL 0008.scaffold00029 177967 1 . C scaffold639 Both SNP 0008.scaffold00029 177978 1 G A scaffold639 Both SNP 0008.scaffold00029 178002 1 G A scaffold639 Both SNP 0008.scaffold00029 178093 1 A T scaffold639 Both SNP 0008.scaffold00029 178205 1 A G scaffold639 Both SNP 0008.scaffold00029 178316 1 C G scaffold639 ScafM SNP 0008.scaffold00029 178332 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 178389 1 A . scaffold639 ScafM SNP 0008.scaffold00029 178513 2 GT AA scaffold639 ScafM SNP 0008.scaffold00029 178541 2 GT AG scaffold639 ScafM INDEL 0008.scaffold00029 178630 8 ........ CAATTCTA scaffold639 Both SNP 0008.scaffold00029 178730 1 G C scaffold639 ScafM SNP 0008.scaffold00029 178887 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 178899 11 TTTGTCTTTTC ........... scaffold639 ScafM INDEL 0008.scaffold00029 178946 7 TGATTGT ....... scaffold639 ScafM INDEL 0008.scaffold00029 178995 2 TT .. scaffold639 ScafM SNP 0008.scaffold00029 179121 1 T C scaffold639 ScafM SNP 0008.scaffold00029 179124 1 T A scaffold639 ScafM SNP 0008.scaffold00029 179161 1 A G scaffold639 ScafM SNP 0008.scaffold00029 179175 1 C T scaffold639 ScafM SNP 0008.scaffold00029 179198 1 A G scaffold639 ScafM SNP 0008.scaffold00029 179217 1 A G scaffold639 ScafM SNP 0008.scaffold00029 179242 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 179306 1 . T scaffold639 ScafM SNP 0008.scaffold00029 179317 1 G A scaffold639 ScafM SNP 0008.scaffold00029 179322 1 C T scaffold639 ScafM SNP 0008.scaffold00029 179354 1 A C scaffold639 ScafM SNP 0008.scaffold00029 179369 1 G A scaffold639 ScafM SNP 0008.scaffold00029 179372 1 A G scaffold639 ScafM SNP 0008.scaffold00029 179381 1 T A scaffold639 ScafM SNP 0008.scaffold00029 179398 3 ATT GAA scaffold639 ScafM INDEL 0008.scaffold00029 179443 2 AA .T scaffold639 ScafM SNP 0008.scaffold00029 179451 1 G A scaffold639 ScafM SNP 0008.scaffold00029 179455 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 179468 2 .. CA scaffold639 ScafM INDEL 0008.scaffold00029 179537 1 C . scaffold639 ScafM SNP 0008.scaffold00029 179549 1 C G scaffold639 ScafM SNP 0008.scaffold00029 179566 1 G C scaffold639 ScafM SNP 0008.scaffold00029 179583 1 A C scaffold639 ScafM SNP 0008.scaffold00029 179610 1 T G scaffold639 ScafM SNP 0008.scaffold00029 179642 1 G T scaffold639 ScafM SNP 0008.scaffold00029 179644 1 T C scaffold639 ScafM SNP 0008.scaffold00029 179661 1 C A scaffold639 Both SNP 0008.scaffold00029 179746 1 C A scaffold639 Both SNP 0008.scaffold00029 179844 1 T A scaffold639 Both SNP 0008.scaffold00029 179850 1 T A scaffold639 Both INDEL 0008.scaffold00029 179863 1 T . scaffold639 ScafM INDEL 0008.scaffold00029 180037 1 . G scaffold639 ScafM SNP 0008.scaffold00029 180148 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 180256 2 .. TC scaffold639 Both SNP 0008.scaffold00029 180286 1 T C scaffold639 Both SNP 0008.scaffold00029 180331 1 G C scaffold639 Both INDEL 0008.scaffold00029 180396 2 TA .. scaffold639 Both SNP 0008.scaffold00029 180478 1 G C scaffold639 Both SNP 0008.scaffold00029 180487 1 T C scaffold639 ScafM SNP 0008.scaffold00029 180536 1 C G scaffold639 ScafM SNP 0008.scaffold00029 180576 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 180582 2 TC .A scaffold639 ScafM INDEL 0008.scaffold00029 180593 1 A . scaffold639 ScafM SNP 0008.scaffold00029 180615 1 G C scaffold639 ScafM SNP 0008.scaffold00029 180621 1 A T scaffold639 ScafM SNP 0008.scaffold00029 180626 1 C T scaffold639 ScafM SNP 0008.scaffold00029 180632 1 T G scaffold639 ScafM SNP 0008.scaffold00029 180639 1 A G scaffold639 ScafM SNP 0008.scaffold00029 180648 1 G A scaffold639 ScafM SNP 0008.scaffold00029 180659 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 180660 4 .... CCTC scaffold639 ScafM INDEL 0008.scaffold00029 180661 1 . A scaffold639 ScafM INDEL 0008.scaffold00029 180662 3 ... TTT scaffold639 ScafM INDEL 0008.scaffold00029 180665 12 ............ ATATTATGGGAT scaffold639 ScafM SNP 0008.scaffold00029 180712 1 G T scaffold639 ScafM SNP 0008.scaffold00029 180754 1 T A scaffold639 ScafM SNP 0008.scaffold00029 180785 1 T A scaffold639 ScafM INDEL 0008.scaffold00029 180798 10 GTGAAAATTG .......... scaffold639 ScafM SNP 0008.scaffold00029 180814 1 A C scaffold639 ScafM SNP 0008.scaffold00029 180832 1 G C scaffold639 ScafM SNP 0008.scaffold00029 180850 1 G A scaffold639 Both SNP 0008.scaffold00029 180911 1 A T scaffold639 Both SNP 0008.scaffold00029 180925 1 G A scaffold639 ScafM SNP 0008.scaffold00029 180955 1 A T scaffold639 Both SNP 0008.scaffold00029 180980 1 T C scaffold639 Both SNP 0008.scaffold00029 181189 1 C T scaffold639 Both SNP 0008.scaffold00029 181195 1 G A scaffold639 Both SNP 0008.scaffold00029 181294 1 T A scaffold639 Both SNP 0008.scaffold00029 181317 1 T C scaffold639 Both SNP 0008.scaffold00029 181561 1 A G scaffold639 Both SNP 0008.scaffold00029 181568 1 G T scaffold639 Both SNP 0008.scaffold00029 181607 1 A C scaffold639 ScafM INDEL 0008.scaffold00029 181626 1 . T scaffold639 ScafM SNP 0008.scaffold00029 181628 1 A T scaffold639 ScafM SNP 0008.scaffold00029 181636 1 A C scaffold639 ScafM SNP 0008.scaffold00029 181648 1 T A scaffold639 Both SNP 0008.scaffold00029 181669 1 A G scaffold639 Both SNP 0008.scaffold00029 181691 1 G A scaffold639 Both SNP 0008.scaffold00029 181768 1 C T scaffold639 Both SNP 0008.scaffold00029 181998 1 A C scaffold639 Both SNP 0008.scaffold00029 182187 1 G C scaffold639 Both SNP 0008.scaffold00029 182244 1 C G scaffold639 Both SNP 0008.scaffold00029 182252 1 C A scaffold639 ScafM SNP 0008.scaffold00029 182309 1 C T scaffold639 ScafM SNP 0008.scaffold00029 182320 1 C T scaffold639 ScafM SNP 0008.scaffold00029 182363 1 C A scaffold639 ScafM SNP 0008.scaffold00029 182390 1 C T scaffold639 ScafM SNP 0008.scaffold00029 182407 1 T G scaffold639 ScafM INDEL 0008.scaffold00029 182409 2 TC .. scaffold639 ScafM SNP 0008.scaffold00029 182412 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 182418 5 AGATC ..... scaffold639 ScafM SNP 0008.scaffold00029 182466 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 182511 8 TGGGGGGG ........ scaffold639 ScafM INDEL 0008.scaffold00029 182525 7 GGTGGGG ....... scaffold639 ScafM INDEL 0008.scaffold00029 182533 1 G . scaffold639 ScafM INDEL 0008.scaffold00029 182618 2 .. CT scaffold639 ScafM SNP 0008.scaffold00029 182639 1 T C scaffold639 ScafM SNP 0008.scaffold00029 182642 1 C T scaffold639 ScafM SNP 0008.scaffold00029 182648 1 T C scaffold639 ScafM INDEL 0008.scaffold00029 182669 2 .. TA scaffold639 ScafM SNP 0008.scaffold00029 182705 1 T C scaffold639 ScafM SNP 0008.scaffold00029 182711 1 C T scaffold639 Both SNP 0008.scaffold00029 182908 1 G A scaffold639 Both INDEL 0008.scaffold00029 182913 2 .. AA scaffold639 ScafM INDEL 0008.scaffold00029 182982 2 AT .. scaffold639 ScafM INDEL 0008.scaffold00029 182990 3 ... CCC scaffold639 ScafM SNP 0008.scaffold00029 183066 1 T A scaffold639 ScafM SNP 0008.scaffold00029 183090 1 A G scaffold639 ScafM SNP 0008.scaffold00029 183105 1 T C scaffold639 ScafM SNP 0008.scaffold00029 183111 1 G A scaffold639 ScafM SNP 0008.scaffold00029 183120 1 C G scaffold639 ScafM SNP 0008.scaffold00029 183137 1 T A scaffold639 ScafM SNP 0008.scaffold00029 183158 1 G A scaffold639 ScafM SNP 0008.scaffold00029 183163 1 T C scaffold639 ScafM SNP 0008.scaffold00029 183171 1 T C scaffold639 ScafM SNP 0008.scaffold00029 183182 1 A G scaffold639 ScafM SNP 0008.scaffold00029 183211 1 G A scaffold639 ScafM SNP 0008.scaffold00029 183214 1 C G scaffold639 ScafM SNP 0008.scaffold00029 183222 1 T G scaffold639 ScafM SNP 0008.scaffold00029 183226 1 G T scaffold639 ScafM SNP 0008.scaffold00029 183228 1 G A scaffold639 ScafM SNP 0008.scaffold00029 183230 1 G A scaffold639 Both SNP 0008.scaffold00029 183334 1 C T scaffold639 Both SNP 0008.scaffold00029 183618 1 T A scaffold639 Both SNP 0008.scaffold00029 183652 1 G T scaffold639 Both SNP 0008.scaffold00029 183665 1 T C scaffold639 Both SNP 0008.scaffold00029 183722 1 T G scaffold639 Both SNP 0008.scaffold00029 183746 1 T A scaffold639 Both SNP 0008.scaffold00029 183784 1 C T scaffold639 ScafM INDEL 0008.scaffold00029 183901 8 TATTTGAT ........ scaffold639 Both SNP 0008.scaffold00029 185904 1 C T scaffold639 Both SNP 0008.scaffold00029 186153 1 G A scaffold639 Both SNP 0008.scaffold00029 186326 1 C G scaffold639 Both SNP 0008.scaffold00029 186342 1 C T scaffold639 Both SNP 0008.scaffold00029 186410 1 A G scaffold639 ReadM SNP 0008.scaffold00029 186651 1 G A - ReadM SNP 0008.scaffold00029 186715 1 C A - ReadM SNP 0008.scaffold00029 186738 1 G C - ReadM SNP 0008.scaffold00029 186787 1 C T - ReadM SNP 0008.scaffold00029 186806 1 A G - ReadM SNP 0008.scaffold00029 186918 1 G A - ReadM SNP 0008.scaffold00029 187226 1 C G - ReadM SNP 0008.scaffold00029 187233 1 G A - ReadM SNP 0008.scaffold00029 187396 1 A G - ReadM SNP 0008.scaffold00029 187500 1 T C - ReadM INDEL 0008.scaffold00029 187715 1 C . - ReadM SNP 0008.scaffold00029 187743 1 G A - ReadM SNP 0008.scaffold00029 187854 1 G T - ReadM SNP 0008.scaffold00029 188035 1 G C - ReadM SNP 0008.scaffold00029 188243 1 G A - ReadM SNP 0008.scaffold00029 188632 1 C T - ReadM SNP 0008.scaffold00029 188688 1 A G - ReadM SNP 0008.scaffold00029 188923 1 A C - ReadM INDEL 0008.scaffold00029 189723 1 A . - ReadM SNP 0008.scaffold00029 190010 1 C T - ReadM SNP 0008.scaffold00029 190035 1 C A - Both SNP 0008.scaffold00029 190177 1 T A scaffold639 ScafM SNP 0008.scaffold00029 190224 1 T G scaffold639 ScafM SNP 0008.scaffold00029 190226 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 190524 4 .... AAAA scaffold639 ScafM SNP 0008.scaffold00029 190569 1 G T scaffold639 ScafM INDEL 0008.scaffold00029 191052 3 ... AAA scaffold639 ScafM SNP 0008.scaffold00029 191057 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 191067 1 . G scaffold639 ScafM SNP 0008.scaffold00029 191162 1 C T scaffold639 ScafM SNP 0008.scaffold00029 191204 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 191286 8 GCCATATG ........ scaffold639 ScafM SNP 0008.scaffold00029 191538 1 C T scaffold639 ReadM SNP 0008.scaffold00029 193233 1 C T - ReadM SNP 0008.scaffold00029 193241 1 C T - ReadM SNP 0008.scaffold00029 193329 1 A G - ScafM SNP 0008.scaffold00029 193709 1 A T scaffold639 ScafM INDEL 0008.scaffold00029 193723 1 . T scaffold639 ScafM SNP 0008.scaffold00029 193905 1 C T scaffold639 ScafM SNP 0008.scaffold00029 193936 1 C A scaffold639 ReadM INDEL 0008.scaffold00029 194209 1 . A - ReadM SNP 0008.scaffold00029 194220 1 A G - ReadM SNP 0008.scaffold00029 194265 1 T C - ReadM SNP 0008.scaffold00029 195169 1 G A - Both SNP 0008.scaffold00029 195620 1 C T scaffold639 ScafM SNP 0008.scaffold00029 195645 1 C A scaffold639 ScafM SNP 0008.scaffold00029 195651 1 C T scaffold639 ScafM SNP 0008.scaffold00029 195721 1 C T scaffold639 ScafM SNP 0008.scaffold00029 195723 1 A G scaffold639 Both SNP 0008.scaffold00029 195776 1 C T scaffold639 Both SNP 0008.scaffold00029 195925 1 T A scaffold639 Both SNP 0008.scaffold00029 196027 1 T C scaffold639 Both SNP 0008.scaffold00029 196070 1 A G scaffold639 Both SNP 0008.scaffold00029 196097 1 A T scaffold639 Both SNP 0008.scaffold00029 196099 1 C T scaffold639 Both SNP 0008.scaffold00029 196250 1 G A scaffold639 ReadM SNP 0008.scaffold00029 199156 1 A G - ReadM SNP 0008.scaffold00029 199189 1 A G - ReadM SNP 0008.scaffold00029 199205 1 G A - ScafM INDEL 0008.scaffold00029 199437 6 ...... ATTATC scaffold639 ScafM SNP 0008.scaffold00029 199951 1 A T scaffold639 ScafM SNP 0008.scaffold00029 200344 1 T A scaffold639 ScafM SNP 0008.scaffold00029 200468 1 A G scaffold639 ScafM SNP 0008.scaffold00029 200514 1 C T scaffold639 ScafM SNP 0008.scaffold00029 200546 1 C G scaffold639 ScafM INDEL 0008.scaffold00029 200582 3 AGT ... scaffold639 ScafM INDEL 0008.scaffold00029 200656 3 ... ATA scaffold639 ScafM INDEL 0008.scaffold00029 200711 1 A . scaffold639 ScafM INDEL 0008.scaffold00029 200813 3 ... CAT scaffold639 Both SNP 0008.scaffold00029 200877 1 G C scaffold639 Both SNP 0008.scaffold00029 200905 1 A G scaffold639 Both SNP 0008.scaffold00029 200971 1 G A scaffold639 Both SNP 0008.scaffold00029 201229 1 G A scaffold639 ScafM INDEL 0008.scaffold00029 201238 3 ... TAT scaffold639 Both SNP 0008.scaffold00029 201393 1 G T scaffold639 Both SNP 0008.scaffold00029 201417 1 G T scaffold639 Both SNP 0008.scaffold00029 201420 1 A G scaffold639 ScafM INDEL 0008.scaffold00029 210284 2 .. AA scaffold12151 ScafM INDEL 0008.scaffold00029 210655 1 . C scaffold12151 ScafM SNP 0008.scaffold00029 219523 1 G T scaffold12151 ScafM SNP 0008.scaffold00029 219559 1 G A scaffold12151 Both SNP 0008.scaffold00029 241516 1 A C scaffold23427 ScafM INDEL 0008.scaffold00029 261098 1 . T scaffold2293 ScafM SNP 0008.scaffold00029 267933 1 A C scaffold2293 Both SNP 0008.scaffold00029 302752 1 C G scaffold3387 Both SNP 0008.scaffold00029 302821 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 302842 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 302885 1 G C scaffold3387 ScafM SNP 0008.scaffold00029 302903 1 G T scaffold3387 ScafM SNP 0008.scaffold00029 302928 1 A T scaffold3387 ScafM SNP 0008.scaffold00029 302939 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 302945 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 302947 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 302957 1 T G scaffold3387 ScafM SNP 0008.scaffold00029 303865 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 303897 1 C A scaffold3387 ScafM INDEL 0008.scaffold00029 303925 1 A . scaffold3387 ScafM SNP 0008.scaffold00029 303955 1 C G scaffold3387 ScafM SNP 0008.scaffold00029 303964 1 G A scaffold3387 ScafM INDEL 0008.scaffold00029 304002 1 . T scaffold3387 ScafM INDEL 0008.scaffold00029 304082 4 ATTT .... scaffold3387 ScafM SNP 0008.scaffold00029 304091 1 G A scaffold3387 Both SNP 0008.scaffold00029 304136 1 G A scaffold3387 Both SNP 0008.scaffold00029 304217 1 G T scaffold3387 Both SNP 0008.scaffold00029 304277 1 T A scaffold3387 Both SNP 0008.scaffold00029 304380 1 C T scaffold3387 Both SNP 0008.scaffold00029 304604 1 C A scaffold3387 Both INDEL 0008.scaffold00029 304663 3 TTT ... scaffold3387 ScafM SNP 0008.scaffold00029 304784 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 304788 2 GT TG scaffold3387 Both SNP 0008.scaffold00029 305024 1 G A scaffold3387 Both SNP 0008.scaffold00029 305220 1 C T scaffold3387 Both SNP 0008.scaffold00029 305452 1 C T scaffold3387 Both SNP 0008.scaffold00029 305504 1 G A scaffold3387 Both SNP 0008.scaffold00029 305662 1 T A scaffold3387 ReadM INDEL 0008.scaffold00029 305900 1 G . - ReadM SNP 0008.scaffold00029 305950 1 G T - ReadM SNP 0008.scaffold00029 305979 1 C T - ReadM SNP 0008.scaffold00029 306044 1 C T - ReadM SNP 0008.scaffold00029 306061 1 A G - ReadM INDEL 0008.scaffold00029 306093 1 . A - ReadM SNP 0008.scaffold00029 306132 1 A T - ReadM SNP 0008.scaffold00029 306184 1 T C - ReadM SNP 0008.scaffold00029 306200 1 G A - ReadM SNP 0008.scaffold00029 306206 1 T G - ReadM SNP 0008.scaffold00029 306240 1 C G - ReadM SNP 0008.scaffold00029 306342 1 C T - ReadM SNP 0008.scaffold00029 306418 1 T C - ReadM SNP 0008.scaffold00029 306485 1 T C - ReadM SNP 0008.scaffold00029 306496 1 G C - ReadM SNP 0008.scaffold00029 306506 1 T C - ReadM SNP 0008.scaffold00029 306616 1 C T - ReadM SNP 0008.scaffold00029 306706 1 G T - ReadM SNP 0008.scaffold00029 306750 1 A G - ReadM SNP 0008.scaffold00029 306822 1 C A - ReadM SNP 0008.scaffold00029 307041 1 A G - ReadM SNP 0008.scaffold00029 307083 1 A G - ReadM SNP 0008.scaffold00029 307152 1 C T - ReadM SNP 0008.scaffold00029 307292 1 C T - ReadM INDEL 0008.scaffold00029 307327 1 . T - ReadM SNP 0008.scaffold00029 307337 1 C G - ReadM SNP 0008.scaffold00029 307387 1 C T - ReadM SNP 0008.scaffold00029 307451 1 G A - ReadM SNP 0008.scaffold00029 307494 1 C T - ReadM SNP 0008.scaffold00029 307549 1 G A - ReadM SNP 0008.scaffold00029 307578 1 T C - ReadM SNP 0008.scaffold00029 307709 1 G A - ReadM SNP 0008.scaffold00029 307720 1 G A - ReadM SNP 0008.scaffold00029 307760 1 A G - ReadM SNP 0008.scaffold00029 307836 1 A C - ReadM SNP 0008.scaffold00029 307847 1 A C - ReadM SNP 0008.scaffold00029 307852 1 T A - Both SNP 0008.scaffold00029 307900 1 T C scaffold3387 Both SNP 0008.scaffold00029 307926 1 G A scaffold3387 Both SNP 0008.scaffold00029 307932 1 G T scaffold3387 Both SNP 0008.scaffold00029 307978 1 G C scaffold3387 Both SNP 0008.scaffold00029 308056 1 C T scaffold3387 Both SNP 0008.scaffold00029 308061 1 C A scaffold3387 Both SNP 0008.scaffold00029 308105 1 G A scaffold3387 Both INDEL 0008.scaffold00029 308153 1 A . scaffold3387 Both INDEL 0008.scaffold00029 308231 1 . T scaffold3387 ScafM INDEL 0008.scaffold00029 308265 2 .. TC scaffold3387 ScafM SNP 0008.scaffold00029 308303 1 G A scaffold3387 Both SNP 0008.scaffold00029 308307 1 G C scaffold3387 Both SNP 0008.scaffold00029 308416 1 C A scaffold3387 Both SNP 0008.scaffold00029 308454 1 C T scaffold3387 Both SNP 0008.scaffold00029 308469 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 308604 1 T A scaffold3387 ScafM SNP 0008.scaffold00029 308606 1 C T scaffold3387 Both SNP 0008.scaffold00029 308619 1 T C scaffold3387 Both SNP 0008.scaffold00029 308756 1 C A scaffold3387 ScafM SNP 0008.scaffold00029 308887 1 T C scaffold3387 ScafM SNP 0008.scaffold00029 308890 1 T A scaffold3387 ScafM SNP 0008.scaffold00029 308901 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 308918 1 A G scaffold3387 ReadM SNP 0008.scaffold00029 310071 1 C A - ReadM SNP 0008.scaffold00029 310115 1 C T - ReadM SNP 0008.scaffold00029 310265 1 G A - ReadM SNP 0008.scaffold00029 310281 1 T C - ReadM SNP 0008.scaffold00029 310284 1 C A - ReadM SNP 0008.scaffold00029 310319 1 A G - ReadM SNP 0008.scaffold00029 310412 1 G T - ReadM SNP 0008.scaffold00029 310437 1 A T - ReadM SNP 0008.scaffold00029 310507 1 T G - ReadM SNP 0008.scaffold00029 310623 1 C T - ReadM INDEL 0008.scaffold00029 310627 1 . T - ReadM SNP 0008.scaffold00029 310690 1 G T - ReadM SNP 0008.scaffold00029 310749 1 G A - ReadM SNP 0008.scaffold00029 310754 1 G C - ReadM SNP 0008.scaffold00029 310810 1 C T - ReadM SNP 0008.scaffold00029 310834 1 C T - ReadM SNP 0008.scaffold00029 310861 1 T C - ReadM SNP 0008.scaffold00029 311035 1 G A - ReadM SNP 0008.scaffold00029 311081 1 A G - ReadM SNP 0008.scaffold00029 311116 1 C T - ReadM INDEL 0008.scaffold00029 311158 1 . C - ReadM SNP 0008.scaffold00029 311220 1 T C - ReadM SNP 0008.scaffold00029 311226 1 A T - ReadM SNP 0008.scaffold00029 311230 1 G A - ReadM SNP 0008.scaffold00029 311428 1 T C - ReadM SNP 0008.scaffold00029 311461 1 G A - ReadM SNP 0008.scaffold00029 311562 1 G C - ReadM SNP 0008.scaffold00029 311587 1 C T - ReadM SNP 0008.scaffold00029 311643 1 T C - Both SNP 0008.scaffold00029 311835 1 A T scaffold3387 Both SNP 0008.scaffold00029 311845 1 T C scaffold3387 Both SNP 0008.scaffold00029 311924 1 A C scaffold3387 Both SNP 0008.scaffold00029 311952 1 T G scaffold3387 Both SNP 0008.scaffold00029 311954 1 T C scaffold3387 Both SNP 0008.scaffold00029 311988 1 C A scaffold3387 Both SNP 0008.scaffold00029 312008 1 T C scaffold3387 Both SNP 0008.scaffold00029 312018 1 C T scaffold3387 Both SNP 0008.scaffold00029 312131 1 G A scaffold3387 Both INDEL 0008.scaffold00029 312173 1 T . scaffold3387 Both SNP 0008.scaffold00029 312185 1 T C scaffold3387 ScafM INDEL 0008.scaffold00029 312211 3 ... GCG scaffold3387 Both SNP 0008.scaffold00029 312326 1 T C scaffold3387 ScafM SNP 0008.scaffold00029 312367 2 CG AT scaffold3387 ScafM SNP 0008.scaffold00029 312381 1 G T scaffold3387 Both SNP 0008.scaffold00029 312430 1 C T scaffold3387 Both SNP 0008.scaffold00029 312448 1 T C scaffold3387 Both SNP 0008.scaffold00029 312483 1 A G scaffold3387 Both SNP 0008.scaffold00029 312501 1 G A scaffold3387 Both SNP 0008.scaffold00029 312530 1 C A scaffold3387 Both SNP 0008.scaffold00029 312571 1 G C scaffold3387 Both SNP 0008.scaffold00029 312625 1 T C scaffold3387 Both SNP 0008.scaffold00029 312633 1 A G scaffold3387 Both SNP 0008.scaffold00029 312648 1 A T scaffold3387 Both SNP 0008.scaffold00029 312685 1 A G scaffold3387 Both SNP 0008.scaffold00029 312741 1 A G scaffold3387 Both SNP 0008.scaffold00029 312771 1 G C scaffold3387 Both SNP 0008.scaffold00029 313025 1 G A scaffold3387 Both SNP 0008.scaffold00029 313034 1 T A scaffold3387 Both SNP 0008.scaffold00029 313048 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 313097 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 313113 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 313126 1 A T scaffold3387 ScafM INDEL 0008.scaffold00029 313214 2 CC .G scaffold3387 ScafM SNP 0008.scaffold00029 313326 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 313799 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 313810 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 313816 1 T C scaffold3387 ScafM INDEL 0008.scaffold00029 313818 2 TT .. scaffold3387 ScafM INDEL 0008.scaffold00029 313842 1 . T scaffold3387 ScafM INDEL 0008.scaffold00029 313876 1 . A scaffold3387 ScafM SNP 0008.scaffold00029 313891 1 G A scaffold3387 Both SNP 0008.scaffold00029 314169 1 T C scaffold3387 Both SNP 0008.scaffold00029 314256 1 G C scaffold3387 Both SNP 0008.scaffold00029 314418 2 AT GG scaffold3387 Both SNP 0008.scaffold00029 314478 1 C T scaffold3387 Both SNP 0008.scaffold00029 314532 1 G T scaffold3387 ScafM SNP 0008.scaffold00029 314594 1 T C scaffold3387 ScafM INDEL 0008.scaffold00029 314647 3 ... TTG scaffold3387 ScafM SNP 0008.scaffold00029 314711 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 314774 1 G A scaffold3387 ScafM INDEL 0008.scaffold00029 314864 1 . A scaffold3387 ScafM SNP 0008.scaffold00029 314945 1 G A scaffold3387 ScafM INDEL 0008.scaffold00029 314956 4 .... TATT scaffold3387 ScafM SNP 0008.scaffold00029 314976 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 314982 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 315029 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 315061 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 315453 1 A T scaffold3387 Both SNP 0008.scaffold00029 315555 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 315576 1 G C scaffold3387 ScafM SNP 0008.scaffold00029 315589 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 315634 1 G C scaffold3387 ScafM SNP 0008.scaffold00029 315657 1 A G scaffold3387 Both INDEL 0008.scaffold00029 315815 1 A . scaffold3387 ScafM SNP 0008.scaffold00029 315864 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 316035 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 316053 1 T C scaffold3387 ScafM SNP 0008.scaffold00029 316115 1 T G scaffold3387 ReadM SNP 0008.scaffold00029 316865 1 G A - ScafM SNP 0008.scaffold00029 316971 1 T A scaffold3387 Both SNP 0008.scaffold00029 317064 1 T C scaffold3387 ScafM SNP 0008.scaffold00029 317106 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 317133 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 317145 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 317148 1 T C scaffold3387 ScafM INDEL 0008.scaffold00029 317244 4 .... GCAT scaffold3387 ScafM INDEL 0008.scaffold00029 317348 1 T . scaffold3387 ScafM SNP 0008.scaffold00029 317388 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 317412 1 A G scaffold3387 ScafM INDEL 0008.scaffold00029 317420 1 A . scaffold3387 Both SNP 0008.scaffold00029 317454 1 C A scaffold3387 ReadM SNP 0008.scaffold00029 317545 1 T C - ReadM SNP 0008.scaffold00029 317567 1 G A - ReadM SNP 0008.scaffold00029 317651 1 C A - ReadM SNP 0008.scaffold00029 317703 1 T C - ReadM SNP 0008.scaffold00029 317705 1 G A - ReadM SNP 0008.scaffold00029 317744 1 T C - ReadM SNP 0008.scaffold00029 317837 1 A G - ReadM SNP 0008.scaffold00029 317960 1 G A - ReadM SNP 0008.scaffold00029 317993 1 C G - ReadM SNP 0008.scaffold00029 318019 1 T G - ReadM SNP 0008.scaffold00029 318072 1 C A - ReadM SNP 0008.scaffold00029 318151 1 C T - ReadM SNP 0008.scaffold00029 318314 1 C T - ReadM SNP 0008.scaffold00029 318515 1 T C - ReadM SNP 0008.scaffold00029 318595 1 A C - ReadM SNP 0008.scaffold00029 318613 1 C T - ReadM SNP 0008.scaffold00029 318671 1 T A - ReadM SNP 0008.scaffold00029 318785 1 C T - ReadM SNP 0008.scaffold00029 318869 1 C T - ReadM SNP 0008.scaffold00029 318889 1 T C - ReadM SNP 0008.scaffold00029 318900 1 T C - ReadM INDEL 0008.scaffold00029 318940 1 . C - ReadM SNP 0008.scaffold00029 319012 1 A C - ReadM SNP 0008.scaffold00029 319071 1 C T - ReadM SNP 0008.scaffold00029 319228 1 G A - ReadM SNP 0008.scaffold00029 319301 1 A G - ReadM SNP 0008.scaffold00029 319316 1 G A - ReadM SNP 0008.scaffold00029 319329 1 T C - ReadM SNP 0008.scaffold00029 319408 1 T G - ReadM SNP 0008.scaffold00029 319480 1 A G - ReadM SNP 0008.scaffold00029 319605 1 T C - ReadM SNP 0008.scaffold00029 319675 1 T G - ReadM SNP 0008.scaffold00029 319696 1 C G - ReadM SNP 0008.scaffold00029 319790 1 C T - ReadM SNP 0008.scaffold00029 319862 1 G T - Both SNP 0008.scaffold00029 319886 1 T C scaffold3387 Both SNP 0008.scaffold00029 319960 1 C T scaffold3387 ReadM SNP 0008.scaffold00029 320019 1 C G - ReadM SNP 0008.scaffold00029 320047 1 A G - ReadM SNP 0008.scaffold00029 320072 1 A T - ReadM SNP 0008.scaffold00029 320127 1 G C - ReadM SNP 0008.scaffold00029 320172 1 T C - ReadM SNP 0008.scaffold00029 320299 1 A C - ReadM SNP 0008.scaffold00029 320333 1 C A - ReadM SNP 0008.scaffold00029 320398 1 T C - ReadM SNP 0008.scaffold00029 320438 1 A C - ReadM SNP 0008.scaffold00029 320460 1 T C - ReadM SNP 0008.scaffold00029 320519 1 C T - ReadM SNP 0008.scaffold00029 320572 1 A G - ReadM SNP 0008.scaffold00029 320579 1 G A - ReadM SNP 0008.scaffold00029 320612 1 T C - ReadM SNP 0008.scaffold00029 320943 1 A G - ReadM SNP 0008.scaffold00029 320950 1 C T - ReadM SNP 0008.scaffold00029 321029 1 C T - ReadM SNP 0008.scaffold00029 321115 1 A G - ReadM SNP 0008.scaffold00029 321140 1 A C - ReadM SNP 0008.scaffold00029 321243 1 C T - ReadM SNP 0008.scaffold00029 321518 1 G A - ReadM SNP 0008.scaffold00029 321544 1 G A - ReadM SNP 0008.scaffold00029 321688 1 G A - ReadM SNP 0008.scaffold00029 321697 1 A G - ReadM SNP 0008.scaffold00029 321734 1 A G - ReadM SNP 0008.scaffold00029 321793 1 G A - ReadM SNP 0008.scaffold00029 321827 1 G A - ReadM SNP 0008.scaffold00029 321980 1 A G - ReadM SNP 0008.scaffold00029 322142 1 G C - ReadM SNP 0008.scaffold00029 322187 1 A G - ReadM SNP 0008.scaffold00029 322283 1 G A - ReadM SNP 0008.scaffold00029 322291 1 G A - ReadM SNP 0008.scaffold00029 322493 1 G A - ReadM SNP 0008.scaffold00029 322519 1 A G - ReadM SNP 0008.scaffold00029 322586 1 G C - ReadM INDEL 0008.scaffold00029 322610 1 . G - ReadM SNP 0008.scaffold00029 322681 1 A T - ReadM SNP 0008.scaffold00029 322691 1 A G - ReadM SNP 0008.scaffold00029 322771 1 C G - ReadM SNP 0008.scaffold00029 322783 1 T G - Both SNP 0008.scaffold00029 322922 1 C T scaffold3387 Both SNP 0008.scaffold00029 322930 1 A G scaffold3387 Both SNP 0008.scaffold00029 322967 1 A G scaffold3387 ReadM SNP 0008.scaffold00029 323054 1 A G - ReadM SNP 0008.scaffold00029 323059 1 T C - ReadM SNP 0008.scaffold00029 323417 1 A G - ReadM SNP 0008.scaffold00029 324940 1 T G - ReadM SNP 0008.scaffold00029 325020 1 A G - ReadM SNP 0008.scaffold00029 325110 1 G A - ReadM SNP 0008.scaffold00029 325181 1 A G - ReadM SNP 0008.scaffold00029 325192 1 G T - ReadM SNP 0008.scaffold00029 325202 1 A C - ReadM SNP 0008.scaffold00029 325356 1 G A - ReadM SNP 0008.scaffold00029 325450 1 C T - ReadM SNP 0008.scaffold00029 325640 1 A G - ReadM SNP 0008.scaffold00029 325710 1 G A - ReadM SNP 0008.scaffold00029 325718 1 C T - ReadM SNP 0008.scaffold00029 325819 1 T A - ReadM SNP 0008.scaffold00029 325837 1 T C - ReadM SNP 0008.scaffold00029 325922 1 C T - ReadM SNP 0008.scaffold00029 325951 1 A T - Both SNP 0008.scaffold00029 325999 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 326208 1 G C scaffold3387 ScafM SNP 0008.scaffold00029 326216 1 T G scaffold3387 ScafM SNP 0008.scaffold00029 326236 2 GA AG scaffold3387 ScafM SNP 0008.scaffold00029 326246 1 T C scaffold3387 ScafM SNP 0008.scaffold00029 327168 1 C G scaffold3387 ScafM INDEL 0008.scaffold00029 327290 1 . T scaffold3387 ScafM SNP 0008.scaffold00029 327468 1 C G scaffold3387 ScafM SNP 0008.scaffold00029 327547 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 327554 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 327597 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 328653 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 328656 1 A G scaffold3387 Both SNP 0008.scaffold00029 328756 1 T G scaffold3387 Both SNP 0008.scaffold00029 328796 1 T G scaffold3387 Both SNP 0008.scaffold00029 328824 1 A G scaffold3387 Both SNP 0008.scaffold00029 328903 1 A G scaffold3387 Both SNP 0008.scaffold00029 328932 1 A T scaffold3387 Both SNP 0008.scaffold00029 329025 1 T C scaffold3387 ReadM SNP 0008.scaffold00029 329224 1 C T - ReadM SNP 0008.scaffold00029 329230 1 C T - ScafM SNP 0008.scaffold00029 329320 1 G T scaffold3387 ReadM SNP 0008.scaffold00029 329426 1 A G - ReadM SNP 0008.scaffold00029 329452 1 G T - ReadM SNP 0008.scaffold00029 329582 1 G T - ReadM SNP 0008.scaffold00029 329645 1 C T - ReadM INDEL 0008.scaffold00029 329667 1 A . - ReadM SNP 0008.scaffold00029 329684 1 C T - ReadM SNP 0008.scaffold00029 329815 1 A G - ReadM SNP 0008.scaffold00029 329858 1 T A - ReadM SNP 0008.scaffold00029 329922 1 A G - Both INDEL 0008.scaffold00029 330029 1 . A scaffold3387 Both SNP 0008.scaffold00029 330053 1 T C scaffold3387 Both SNP 0008.scaffold00029 330075 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 330102 1 G A scaffold3387 ScafM INDEL 0008.scaffold00029 330116 1 . G scaffold3387 ScafM SNP 0008.scaffold00029 330140 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 330182 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 330185 1 T G scaffold3387 ScafM SNP 0008.scaffold00029 330192 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 330218 1 A T scaffold3387 ScafM SNP 0008.scaffold00029 330232 1 T G scaffold3387 ScafM SNP 0008.scaffold00029 330287 1 C A scaffold3387 ScafM SNP 0008.scaffold00029 330298 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 330308 1 T C scaffold3387 Both SNP 0008.scaffold00029 330315 1 C T scaffold3387 Both SNP 0008.scaffold00029 330354 1 A G scaffold3387 Both SNP 0008.scaffold00029 330416 1 A G scaffold3387 ReadM SNP 0008.scaffold00029 330467 1 G A - ReadM SNP 0008.scaffold00029 330518 1 C T - ReadM SNP 0008.scaffold00029 330547 1 G A - ReadM SNP 0008.scaffold00029 330736 1 G A - ReadM SNP 0008.scaffold00029 330765 1 T C - ReadM SNP 0008.scaffold00029 330795 1 G A - ReadM SNP 0008.scaffold00029 330928 1 G A - ReadM SNP 0008.scaffold00029 331024 1 G A - ScafM SNP 0008.scaffold00029 331361 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 331376 1 C A scaffold3387 ScafM SNP 0008.scaffold00029 331419 1 A G scaffold3387 Both SNP 0008.scaffold00029 331601 1 G T scaffold3387 Both SNP 0008.scaffold00029 331635 1 G T scaffold3387 Both SNP 0008.scaffold00029 331651 1 T A scaffold3387 Both SNP 0008.scaffold00029 331758 1 T A scaffold3387 Both SNP 0008.scaffold00029 331779 1 C T scaffold3387 Both SNP 0008.scaffold00029 331800 1 A T scaffold3387 Both SNP 0008.scaffold00029 331917 1 A G scaffold3387 Both INDEL 0008.scaffold00029 331950 1 . A scaffold3387 ScafM INDEL 0008.scaffold00029 332080 1 . T scaffold3387 Both SNP 0008.scaffold00029 332171 1 A G scaffold3387 Both SNP 0008.scaffold00029 332187 1 C T scaffold3387 Both SNP 0008.scaffold00029 332206 1 C T scaffold3387 Both SNP 0008.scaffold00029 332289 1 A G scaffold3387 Both SNP 0008.scaffold00029 332300 1 C T scaffold3387 ReadM INDEL 0008.scaffold00029 332318 1 . A - ReadM SNP 0008.scaffold00029 332346 1 A T - ReadM SNP 0008.scaffold00029 332435 1 G C - ReadM SNP 0008.scaffold00029 332440 1 A C - ReadM SNP 0008.scaffold00029 332452 1 C A - ReadM SNP 0008.scaffold00029 333619 1 C T - ReadM SNP 0008.scaffold00029 333638 1 T C - ReadM SNP 0008.scaffold00029 333797 1 A G - ReadM SNP 0008.scaffold00029 333812 1 A C - ReadM SNP 0008.scaffold00029 333821 1 A G - ReadM SNP 0008.scaffold00029 333887 1 C T - ReadM SNP 0008.scaffold00029 333899 1 C A - ReadM SNP 0008.scaffold00029 333928 1 C T - ReadM SNP 0008.scaffold00029 334256 1 G A - ReadM SNP 0008.scaffold00029 334259 1 C G - ReadM SNP 0008.scaffold00029 334331 1 C G - ReadM SNP 0008.scaffold00029 334353 1 T C - ReadM SNP 0008.scaffold00029 334423 1 C A - ReadM SNP 0008.scaffold00029 334459 1 T A - ReadM SNP 0008.scaffold00029 334544 1 A G - ReadM SNP 0008.scaffold00029 334570 1 T C - ReadM SNP 0008.scaffold00029 334619 1 A G - ReadM SNP 0008.scaffold00029 335055 1 T A - ReadM SNP 0008.scaffold00029 335066 1 A G - ReadM SNP 0008.scaffold00029 335202 1 A C - ReadM SNP 0008.scaffold00029 341685 1 A G - ReadM SNP 0008.scaffold00029 341704 1 T C - ReadM SNP 0008.scaffold00029 349837 1 G A - ReadM SNP 0008.scaffold00029 349841 1 G T - ScafM SNP 0008.scaffold00029 352763 1 A T scaffold8217 ScafM SNP 0008.scaffold00029 352791 1 C T scaffold8217 ScafM SNP 0008.scaffold00029 352797 1 A G scaffold8217 ScafM SNP 0008.scaffold00029 352836 1 G A scaffold8217 ScafM SNP 0008.scaffold00029 352860 1 G A scaffold8217 ScafM INDEL 0008.scaffold00029 352890 3 ... ACA scaffold8217 ScafM SNP 0008.scaffold00029 352906 1 T G scaffold8217 ScafM SNP 0008.scaffold00029 358827 1 A G scaffold25851 ScafM SNP 0008.scaffold00029 358843 2 CC TT scaffold25851 ScafM SNP 0008.scaffold00029 358862 2 AT TC scaffold25851 ScafM SNP 0008.scaffold00029 358879 1 C T scaffold25851 ScafM SNP 0008.scaffold00029 358894 1 C G scaffold25851 ScafM SNP 0008.scaffold00029 358950 1 T A scaffold25851 ScafM SNP 0008.scaffold00029 358958 1 A G scaffold25851 ScafM SNP 0008.scaffold00029 358977 1 C T scaffold25851 ScafM SNP 0008.scaffold00029 358993 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359024 1 A G scaffold25851 ScafM SNP 0008.scaffold00029 359131 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359163 1 A T scaffold25851 ScafM SNP 0008.scaffold00029 359172 1 C T scaffold25851 ScafM SNP 0008.scaffold00029 359198 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359203 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359227 1 A G scaffold25851 ScafM SNP 0008.scaffold00029 359229 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359242 1 T A scaffold25851 ScafM SNP 0008.scaffold00029 359264 1 A G scaffold25851 ScafM SNP 0008.scaffold00029 359287 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359300 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359305 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359310 1 C G scaffold25851 ScafM SNP 0008.scaffold00029 359374 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359393 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359426 1 A C scaffold25851 ScafM SNP 0008.scaffold00029 359448 1 G T scaffold25851 ScafM SNP 0008.scaffold00029 359462 1 G T scaffold25851 ScafM SNP 0008.scaffold00029 359478 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359482 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359487 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359489 1 G T scaffold25851 ScafM SNP 0008.scaffold00029 359499 1 T G scaffold25851 ScafM SNP 0008.scaffold00029 359507 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359509 1 A T scaffold25851 ScafM SNP 0008.scaffold00029 359513 1 C T scaffold25851 ScafM SNP 0008.scaffold00029 359531 1 G A scaffold25851 ScafM SNP 0008.scaffold00029 359541 1 C T scaffold25851 ScafM SNP 0008.scaffold00029 359544 1 T C scaffold25851 ScafM SNP 0008.scaffold00029 359572 1 G A scaffold25851 ReadM SNP 0008.scaffold00029 361700 1 A C - ReadM SNP 0008.scaffold00029 361727 1 T A - ReadM SNP 0008.scaffold00029 361811 1 C T - ReadM SNP 0008.scaffold00029 361830 1 T G - ReadM SNP 0008.scaffold00029 361903 1 A C - ReadM SNP 0008.scaffold00029 361998 1 T A - Both SNP 0008.scaffold00029 362036 1 T A scaffold29788 Both SNP 0008.scaffold00029 362119 1 T C scaffold29788 Both SNP 0008.scaffold00029 362126 1 G T scaffold29788 ReadM SNP 0008.scaffold00029 362200 1 A G - ReadM SNP 0008.scaffold00029 362285 1 G T - ReadM SNP 0008.scaffold00029 362314 1 G T - ReadM SNP 0008.scaffold00029 362326 1 T A - ReadM SNP 0008.scaffold00029 362492 1 A G - ReadM SNP 0008.scaffold00029 362554 1 T G - ReadM SNP 0008.scaffold00029 362585 1 T C - ReadM SNP 0008.scaffold00029 362768 1 G A - ReadM SNP 0008.scaffold00029 362814 1 T G - ReadM SNP 0008.scaffold00029 362828 1 C T - ReadM SNP 0008.scaffold00029 362879 1 T A - ReadM SNP 0008.scaffold00029 363048 1 A C - ReadM SNP 0008.scaffold00029 363080 1 T C - ReadM SNP 0008.scaffold00029 363125 1 A T - ReadM SNP 0008.scaffold00029 363180 1 A C - ReadM SNP 0008.scaffold00029 363202 1 T C - ReadM SNP 0008.scaffold00029 363221 1 A G - ReadM SNP 0008.scaffold00029 363356 1 C T - ReadM SNP 0008.scaffold00029 363389 1 C A - ReadM SNP 0008.scaffold00029 363449 1 G C - ReadM SNP 0008.scaffold00029 363476 1 T C - ReadM SNP 0008.scaffold00029 363536 1 C T - ReadM SNP 0008.scaffold00029 363541 1 T C - ReadM SNP 0008.scaffold00029 363587 1 G A - ReadM SNP 0008.scaffold00029 363634 1 T G - ReadM SNP 0008.scaffold00029 363644 1 G T - ReadM SNP 0008.scaffold00029 363703 1 C T - ReadM SNP 0008.scaffold00029 363919 1 A C - ReadM SNP 0008.scaffold00029 363990 1 T C - Both SNP 0008.scaffold00029 364035 1 A G scaffold29788 Both SNP 0008.scaffold00029 364045 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 364061 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 364070 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 364079 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 364082 1 T A scaffold29788 ScafM SNP 0008.scaffold00029 364114 1 T C scaffold29788 ReadM SNP 0008.scaffold00029 364178 1 A G - ReadM SNP 0008.scaffold00029 364205 1 A C - Both SNP 0008.scaffold00029 364239 1 C T scaffold29788 Both SNP 0008.scaffold00029 364272 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 364277 1 A G scaffold29788 Both SNP 0008.scaffold00029 364310 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 364355 1 A T scaffold29788 ScafM SNP 0008.scaffold00029 364371 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 364382 2 TA CC scaffold29788 Both SNP 0008.scaffold00029 364445 1 C T scaffold29788 Both SNP 0008.scaffold00029 364463 1 G A scaffold29788 Both SNP 0008.scaffold00029 364468 1 T G scaffold29788 ScafM SNP 0008.scaffold00029 364544 1 A C scaffold29788 ScafM INDEL 0008.scaffold00029 364560 11 ........... CTTCTAATTTA scaffold29788 Both SNP 0008.scaffold00029 364602 1 A C scaffold29788 ReadM SNP 0008.scaffold00029 364662 1 A G - ReadM SNP 0008.scaffold00029 364732 1 C A - ReadM SNP 0008.scaffold00029 364889 1 C A - ReadM SNP 0008.scaffold00029 364941 1 T C - ReadM SNP 0008.scaffold00029 364950 1 T A - ReadM SNP 0008.scaffold00029 365073 1 A C - ReadM SNP 0008.scaffold00029 365112 1 G T - ReadM SNP 0008.scaffold00029 365180 1 A G - ReadM SNP 0008.scaffold00029 365435 1 T C - ReadM SNP 0008.scaffold00029 365447 1 T A - ReadM SNP 0008.scaffold00029 365462 1 T G - Both SNP 0008.scaffold00029 365493 1 G A scaffold29788 Both SNP 0008.scaffold00029 365617 1 T A scaffold29788 Both SNP 0008.scaffold00029 365638 1 A C scaffold29788 Both SNP 0008.scaffold00029 365660 1 G A scaffold29788 ScafM SNP 0008.scaffold00029 365683 1 T G scaffold29788 Both SNP 0008.scaffold00029 365720 1 C A scaffold29788 Both SNP 0008.scaffold00029 365723 1 T G scaffold29788 ScafM SNP 0008.scaffold00029 365766 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 365799 1 C A scaffold29788 ScafM SNP 0008.scaffold00029 365803 1 G T scaffold29788 ScafM SNP 0008.scaffold00029 365810 1 C T scaffold29788 Both SNP 0008.scaffold00029 365886 1 C T scaffold29788 Both INDEL 0008.scaffold00029 365961 1 C . scaffold29788 Both SNP 0008.scaffold00029 365989 1 C G scaffold29788 ScafM SNP 0008.scaffold00029 366035 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 366053 1 G T scaffold29788 ScafM SNP 0008.scaffold00029 366063 1 C A scaffold29788 ScafM SNP 0008.scaffold00029 366081 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 366088 1 G T scaffold29788 ScafM SNP 0008.scaffold00029 366091 1 A T scaffold29788 Both SNP 0008.scaffold00029 366164 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 366243 1 G A scaffold29788 ScafM SNP 0008.scaffold00029 366262 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 366286 1 T A scaffold29788 ScafM SNP 0008.scaffold00029 366295 1 T G scaffold29788 ScafM SNP 0008.scaffold00029 366299 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 366306 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 366332 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 366352 1 T A scaffold29788 Both SNP 0008.scaffold00029 366398 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 366416 1 T G scaffold29788 ScafM SNP 0008.scaffold00029 366424 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 366473 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 366481 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 366483 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 366485 1 A G scaffold29788 Both SNP 0008.scaffold00029 366578 1 G A scaffold29788 Both SNP 0008.scaffold00029 366589 1 G T scaffold29788 Both SNP 0008.scaffold00029 366601 1 A G scaffold29788 Both SNP 0008.scaffold00029 366760 1 C T scaffold29788 Both SNP 0008.scaffold00029 366799 1 C T scaffold29788 Both SNP 0008.scaffold00029 366835 1 A T scaffold29788 Both SNP 0008.scaffold00029 366868 1 A G scaffold29788 Both SNP 0008.scaffold00029 366910 1 T G scaffold29788 Both SNP 0008.scaffold00029 366946 1 A G scaffold29788 Both SNP 0008.scaffold00029 366978 1 T A scaffold29788 Both SNP 0008.scaffold00029 367039 1 T C scaffold29788 Both SNP 0008.scaffold00029 367094 1 C T scaffold29788 Both SNP 0008.scaffold00029 367099 1 C T scaffold29788 Both SNP 0008.scaffold00029 367195 1 T C scaffold29788 Both SNP 0008.scaffold00029 367202 1 G T scaffold29788 Both SNP 0008.scaffold00029 367231 1 A C scaffold29788 ScafM SNP 0008.scaffold00029 367283 1 G A scaffold29788 ScafM SNP 0008.scaffold00029 367291 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 367319 1 C T scaffold29788 ScafM SNP 0008.scaffold00029 367327 1 T C scaffold29788 ScafM SNP 0008.scaffold00029 367353 1 G A scaffold29788 ScafM SNP 0008.scaffold00029 367356 1 G T scaffold29788 ScafM SNP 0008.scaffold00029 367363 2 AT GG scaffold29788 ScafM SNP 0008.scaffold00029 367370 1 A G scaffold29788 ScafM SNP 0008.scaffold00029 367390 1 G A scaffold29788 ScafM SNP 0008.scaffold00029 367399 1 A C scaffold29788 ScafM SNP 0008.scaffold00029 368238 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 368240 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 368256 2 TT AC scaffold16715 ScafM INDEL 0008.scaffold00029 368266 2 .. GG scaffold16715 ScafM SNP 0008.scaffold00029 368488 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 368510 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 368512 3 TTC ... scaffold16715 ScafM INDEL 0008.scaffold00029 368516 2 CG .. scaffold16715 ScafM SNP 0008.scaffold00029 368526 1 G A scaffold16715 ScafM INDEL 0008.scaffold00029 368539 5 TTGAA ..... scaffold16715 ScafM SNP 0008.scaffold00029 368550 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368555 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 368565 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 368591 2 TA AT scaffold16715 ScafM SNP 0008.scaffold00029 368594 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 368622 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368633 2 AA TG scaffold16715 ScafM SNP 0008.scaffold00029 368640 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 368649 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 368668 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 368684 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 368711 2 CC TA scaffold16715 ScafM SNP 0008.scaffold00029 368715 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 368722 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368729 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368749 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368753 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 368771 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 368778 2 TC AA scaffold16715 ScafM SNP 0008.scaffold00029 368784 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 368787 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 368803 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 368808 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 368824 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 368830 1 G C scaffold16715 ScafM SNP 0008.scaffold00029 368852 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 368854 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 368899 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 368928 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 368939 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 368951 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 368957 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 369601 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 369607 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 369619 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 369629 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 369631 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 369638 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 369724 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 369730 1 T G scaffold16715 ScafM INDEL 0008.scaffold00029 369756 1 . C scaffold16715 ScafM SNP 0008.scaffold00029 369779 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 369790 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 369792 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 369807 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 369812 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 369816 1 A T scaffold16715 ScafM INDEL 0008.scaffold00029 369860 4 .... TTTA scaffold16715 ScafM SNP 0008.scaffold00029 369863 1 G C scaffold16715 ScafM SNP 0008.scaffold00029 369868 1 T G scaffold16715 ScafM INDEL 0008.scaffold00029 369871 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 369886 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 369889 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 369891 1 G T scaffold16715 ScafM INDEL 0008.scaffold00029 369899 3 ... TTC scaffold16715 ScafM SNP 0008.scaffold00029 369900 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 369913 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 369936 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 369945 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 369952 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 369955 1 A G scaffold16715 ScafM INDEL 0008.scaffold00029 369995 1 . T scaffold16715 ScafM SNP 0008.scaffold00029 370013 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 370016 1 G C scaffold16715 ScafM SNP 0008.scaffold00029 370019 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 370025 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 370032 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 370036 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 370049 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 370074 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 370088 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 370095 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 370104 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 370118 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 370358 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 370368 2 AT GC scaffold3387 ScafM SNP 0008.scaffold00029 370371 2 TA CT scaffold3387 ScafM INDEL 0008.scaffold00029 370422 2 .. CT scaffold3387 ScafM SNP 0008.scaffold00029 370426 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 370458 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 370466 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 370494 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370498 1 T A scaffold3387 ScafM SNP 0008.scaffold00029 370521 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 370529 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 370536 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 370542 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370578 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370620 1 G A scaffold3387 ScafM SNP 0008.scaffold00029 370645 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370672 1 T A scaffold3387 Both SNP 0008.scaffold00029 370741 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370773 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370776 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 370780 1 A C scaffold3387 ScafM SNP 0008.scaffold00029 370783 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370789 1 G C scaffold3387 ScafM SNP 0008.scaffold00029 370807 1 C T scaffold3387 ScafM SNP 0008.scaffold00029 370809 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370885 1 T A scaffold3387 ScafM SNP 0008.scaffold00029 370889 1 A G scaffold3387 ScafM SNP 0008.scaffold00029 370907 2 AA GT scaffold3387 ScafM SNP 0008.scaffold00029 370938 1 A T scaffold3387 ScafM INDEL 0008.scaffold00029 370964 7 AATTTCA ....... scaffold3387 ScafM SNP 0008.scaffold00029 370976 1 C G scaffold3387 ScafM SNP 0008.scaffold00029 370987 1 T G scaffold3387 ScafM INDEL 0008.scaffold00029 371100 2 AT .G scaffold16715 ScafM SNP 0008.scaffold00029 371106 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 371112 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 371155 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 371167 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 371241 24 AAAAGAAGAGAGGTTTTAAGGTAA ........................ scaffold16715 ScafM INDEL 0008.scaffold00029 371267 2 AA .. scaffold16715 ScafM SNP 0008.scaffold00029 371328 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 371354 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 371356 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 371386 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 371391 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 371404 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 371420 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 371432 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 371615 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 371708 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 371807 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 371918 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 371995 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 372004 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 372059 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 372125 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 372188 1 G A scaffold16715 Both INDEL 0008.scaffold00029 372269 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 372318 1 C G scaffold16715 ScafM INDEL 0008.scaffold00029 372328 1 . C scaffold16715 ScafM SNP 0008.scaffold00029 372392 2 TT AG scaffold16715 ScafM SNP 0008.scaffold00029 372400 1 A C scaffold16715 ScafM INDEL 0008.scaffold00029 372404 1 G . scaffold16715 ScafM INDEL 0008.scaffold00029 372477 3 TAA ... scaffold16715 ScafM SNP 0008.scaffold00029 372488 1 T G scaffold16715 ScafM INDEL 0008.scaffold00029 372716 18 TTAATGTAGCACCCAATT .................. scaffold16715 ScafM INDEL 0008.scaffold00029 372737 9 AACTACAGC ......... scaffold16715 ScafM INDEL 0008.scaffold00029 372748 4 CCAG .... scaffold16715 ScafM INDEL 0008.scaffold00029 372753 2 CT .. scaffold16715 ScafM SNP 0008.scaffold00029 372756 1 G T scaffold16715 ScafM INDEL 0008.scaffold00029 372760 3 AGG ... scaffold16715 ScafM SNP 0008.scaffold00029 372839 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 372855 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 373799 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 373801 1 A T scaffold16715 ScafM INDEL 0008.scaffold00029 373802 1 . A scaffold16715 ScafM SNP 0008.scaffold00029 373806 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 373816 1 A T scaffold16715 ScafM INDEL 0008.scaffold00029 373826 1 . T scaffold16715 ScafM SNP 0008.scaffold00029 373834 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 373837 2 TT AA scaffold16715 ScafM SNP 0008.scaffold00029 373951 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 374023 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 374040 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 374046 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 374263 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 374277 1 T C scaffold16715 ScafM INDEL 0008.scaffold00029 374292 5 AACTG ..... scaffold16715 ScafM INDEL 0008.scaffold00029 374299 3 TGT ..A scaffold16715 ScafM SNP 0008.scaffold00029 374321 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 374359 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 374369 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 374496 1 . T scaffold16715 ScafM SNP 0008.scaffold00029 374499 1 A G scaffold16715 ScafM INDEL 0008.scaffold00029 374562 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 374666 1 G C scaffold16715 ScafM SNP 0008.scaffold00029 374693 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 374740 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 374768 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 375001 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 375013 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 375018 1 G A scaffold16715 ScafM INDEL 0008.scaffold00029 375022 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 375041 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 375073 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 375109 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 375204 1 G A scaffold16715 Both SNP 0008.scaffold00029 375226 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 375285 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 375298 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 375300 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 375319 1 A G scaffold16715 Both SNP 0008.scaffold00029 375361 1 T C scaffold16715 Both SNP 0008.scaffold00029 375402 1 A G scaffold16715 Both SNP 0008.scaffold00029 375433 1 A C scaffold16715 Both INDEL 0008.scaffold00029 375462 1 . A scaffold16715 Both INDEL 0008.scaffold00029 375561 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 375563 1 G C scaffold16715 Both SNP 0008.scaffold00029 375582 1 T C scaffold16715 Both SNP 0008.scaffold00029 375629 1 A G scaffold16715 Both SNP 0008.scaffold00029 375777 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 375796 3 TAA ... scaffold16715 ReadM SNP 0008.scaffold00029 375918 1 G A - ReadM SNP 0008.scaffold00029 376237 1 C T - ReadM SNP 0008.scaffold00029 376272 1 T C - ReadM SNP 0008.scaffold00029 376401 1 G A - ReadM SNP 0008.scaffold00029 376516 1 C T - ReadM SNP 0008.scaffold00029 376871 1 T C - ReadM SNP 0008.scaffold00029 376878 1 G A - ReadM SNP 0008.scaffold00029 376883 1 C T - ReadM SNP 0008.scaffold00029 377150 1 T C - ReadM SNP 0008.scaffold00029 377275 1 C T - ReadM SNP 0008.scaffold00029 377293 1 T A - ReadM SNP 0008.scaffold00029 377302 1 T C - ReadM SNP 0008.scaffold00029 377557 1 A G - ReadM SNP 0008.scaffold00029 377599 2 GG AA - ReadM SNP 0008.scaffold00029 377769 1 G T - ReadM SNP 0008.scaffold00029 377956 1 A G - ReadM SNP 0008.scaffold00029 377970 1 T C - ScafM INDEL 0008.scaffold00029 378391 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 378393 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 378402 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 378417 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 378421 1 A G scaffold16715 ScafM INDEL 0008.scaffold00029 378423 6 TCTTAG ...... scaffold16715 ScafM SNP 0008.scaffold00029 378436 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 378440 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 378442 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 378496 1 A . scaffold16715 ScafM SNP 0008.scaffold00029 378503 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 378533 1 G C scaffold16715 ScafM INDEL 0008.scaffold00029 378542 2 GG .. scaffold16715 ScafM INDEL 0008.scaffold00029 378546 1 T . scaffold16715 ScafM INDEL 0008.scaffold00029 378548 1 T . scaffold16715 ScafM SNP 0008.scaffold00029 378555 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 378564 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 378834 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 378838 1 A T scaffold16715 ScafM INDEL 0008.scaffold00029 378844 1 . T scaffold16715 ScafM SNP 0008.scaffold00029 378846 1 C G scaffold16715 ScafM SNP 0008.scaffold00029 378854 1 A G scaffold16715 ScafM INDEL 0008.scaffold00029 378867 1 . C scaffold16715 ScafM SNP 0008.scaffold00029 379001 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 379014 2 AT TC scaffold16715 ScafM SNP 0008.scaffold00029 379078 1 C A scaffold16715 ScafM SNP 0008.scaffold00029 379110 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 379119 1 A G scaffold16715 ReadM SNP 0008.scaffold00029 379137 1 G A - ScafM SNP 0008.scaffold00029 379144 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 379168 1 C T scaffold16715 Both SNP 0008.scaffold00029 379190 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 379224 1 A G scaffold16715 Both SNP 0008.scaffold00029 379247 1 A G scaffold16715 ScafM INDEL 0008.scaffold00029 379281 3 ... AAT scaffold16715 ReadM SNP 0008.scaffold00029 379283 1 T C - ScafM INDEL 0008.scaffold00029 379291 2 .. TA scaffold16715 ScafM SNP 0008.scaffold00029 379317 1 C T scaffold16715 ScafM INDEL 0008.scaffold00029 379324 4 GCAC .... scaffold16715 ScafM INDEL 0008.scaffold00029 379335 2 AA .. scaffold16715 ReadM SNP 0008.scaffold00029 379336 1 A T - ScafM SNP 0008.scaffold00029 379382 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 379389 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 379422 1 G A scaffold16715 Both SNP 0008.scaffold00029 379425 1 G A scaffold16715 Both SNP 0008.scaffold00029 379457 1 T G scaffold16715 ScafM SNP 0008.scaffold00029 379499 1 C A scaffold16715 ScafM INDEL 0008.scaffold00029 379503 2 .. GG scaffold16715 ScafM SNP 0008.scaffold00029 379504 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 379506 1 T A scaffold16715 ScafM INDEL 0008.scaffold00029 379512 2 .. TT scaffold16715 ScafM INDEL 0008.scaffold00029 379514 2 .. GT scaffold16715 ScafM INDEL 0008.scaffold00029 379523 4 .... TCAG scaffold16715 ReadM SNP 0008.scaffold00029 379525 1 A C - ScafM INDEL 0008.scaffold00029 379525 3 ... TTC scaffold16715 Both SNP 0008.scaffold00029 379536 1 G T scaffold16715 ScafM SNP 0008.scaffold00029 379544 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 379561 1 G A scaffold16715 Both SNP 0008.scaffold00029 379564 1 T A scaffold16715 ScafM SNP 0008.scaffold00029 379648 1 A G scaffold16715 Both SNP 0008.scaffold00029 379657 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 379702 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 379705 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 379730 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 379732 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 379738 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 379749 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 379759 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 379782 1 C T scaffold16715 Both SNP 0008.scaffold00029 379849 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 379881 2 AA CT scaffold16715 ScafM SNP 0008.scaffold00029 379895 1 A G scaffold16715 ReadM SNP 0008.scaffold00029 379900 1 A G - ReadM SNP 0008.scaffold00029 379958 1 A T - ReadM SNP 0008.scaffold00029 380102 1 A G - ReadM SNP 0008.scaffold00029 380438 1 T C - Both SNP 0008.scaffold00029 381188 1 A T scaffold16715 Both SNP 0008.scaffold00029 381258 1 A G scaffold16715 Both SNP 0008.scaffold00029 381352 1 G C scaffold16715 Both SNP 0008.scaffold00029 381528 1 G C scaffold16715 Both SNP 0008.scaffold00029 381599 1 A G scaffold16715 Both SNP 0008.scaffold00029 381670 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 381822 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 381827 2 GC AG scaffold16715 ScafM SNP 0008.scaffold00029 381833 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 381838 1 C T scaffold16715 Both SNP 0008.scaffold00029 381863 1 T C scaffold16715 Both SNP 0008.scaffold00029 382051 1 C G scaffold16715 Both SNP 0008.scaffold00029 382137 1 T A scaffold16715 ScafM INDEL 0008.scaffold00029 382569 3 ... TTT scaffold16715 ScafM SNP 0008.scaffold00029 382997 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 383015 1 T C scaffold16715 ScafM SNP 0008.scaffold00029 383017 1 G A scaffold16715 ScafM SNP 0008.scaffold00029 383023 2 GT AA scaffold16715 Both INDEL 0008.scaffold00029 383038 1 . A scaffold16715 Both SNP 0008.scaffold00029 383465 1 T G scaffold16715 Both SNP 0008.scaffold00029 383599 1 T C scaffold16715 Both SNP 0008.scaffold00029 383616 1 T A scaffold16715 Both SNP 0008.scaffold00029 383678 1 T A scaffold16715 ReadM SNP 0008.scaffold00029 383808 1 A G - ReadM SNP 0008.scaffold00029 383958 1 T C - ScafM SNP 0008.scaffold00029 401877 1 A C scaffold16715 ScafM SNP 0008.scaffold00029 401999 1 G T scaffold16715 ScafM INDEL 0008.scaffold00029 402328 15 GAATTAAGATTTTTA ............... scaffold16715 Both SNP 0008.scaffold00029 402924 1 T C scaffold16715 ReadM INDEL 0008.scaffold00029 403217 1 T . - Both SNP 0008.scaffold00029 403451 1 G C scaffold16715 ReadM SNP 0008.scaffold00029 404315 1 T C - ReadM SNP 0008.scaffold00029 404569 1 G A - ReadM SNP 0008.scaffold00029 404683 1 A T - ReadM SNP 0008.scaffold00029 404832 1 G T - ScafM INDEL 0008.scaffold00029 405289 1 . T scaffold16715 ScafM SNP 0008.scaffold00029 406348 1 C T scaffold16715 ScafM SNP 0008.scaffold00029 406368 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 406451 1 A G scaffold16715 ScafM SNP 0008.scaffold00029 406508 1 A T scaffold16715 ScafM SNP 0008.scaffold00029 406571 1 G T scaffold16715 ScafM INDEL 0008.scaffold00029 406621 2 .. TA scaffold16715 ScafM INDEL 0008.scaffold00029 406627 1 . A scaffold16715 ScafM SNP 0008.scaffold00029 409343 1 G T scaffold8454 ScafM SNP 0008.scaffold00029 409396 1 A G scaffold8454 ScafM SNP 0008.scaffold00029 409619 1 C G scaffold8454 ScafM INDEL 0008.scaffold00029 409696 3 TTA ... scaffold8454 ScafM SNP 0008.scaffold00029 409876 1 C G scaffold8454 ReadM SNP 0008.scaffold00029 410074 1 A C - Both SNP 0008.scaffold00029 410430 1 A G scaffold8454 Both SNP 0008.scaffold00029 410486 1 C T scaffold8454 ReadM SNP 0008.scaffold00029 410643 1 G A - ReadM SNP 0008.scaffold00029 410685 1 G T - ReadM SNP 0008.scaffold00029 410699 1 T G - ReadM SNP 0008.scaffold00029 410811 1 T C - ReadM SNP 0008.scaffold00029 410840 1 T C - ReadM SNP 0008.scaffold00029 411077 1 A G - ReadM SNP 0008.scaffold00029 411286 1 C T - ReadM INDEL 0008.scaffold00029 411455 1 T . - ReadM SNP 0008.scaffold00029 411627 1 T C - ReadM SNP 0008.scaffold00029 411732 1 C T - ReadM SNP 0008.scaffold00029 411818 1 G A - Both SNP 0008.scaffold00029 412002 1 C T scaffold8454 Both SNP 0008.scaffold00029 412106 1 T G scaffold8454 ReadM SNP 0008.scaffold00029 412274 1 G A - ReadM SNP 0008.scaffold00029 412374 1 C G - ReadM SNP 0008.scaffold00029 412408 1 G T - ReadM SNP 0008.scaffold00029 412479 1 G A - ReadM SNP 0008.scaffold00029 412889 1 G C - ReadM SNP 0008.scaffold00029 413129 1 A G - ReadM SNP 0008.scaffold00029 413163 1 C G - Both SNP 0008.scaffold00029 413534 1 C T scaffold8454 Both SNP 0008.scaffold00029 413550 1 T A scaffold8454 ReadM SNP 0008.scaffold00029 413859 1 A C - Both SNP 0008.scaffold00029 413907 1 G T scaffold8454 ReadM SNP 0008.scaffold00029 413953 1 C T - ScafM SNP 0008.scaffold00029 414194 1 G A scaffold8454 Both SNP 0008.scaffold00029 414226 1 C T scaffold8454 ReadM SNP 0008.scaffold00029 414253 1 C T - ReadM SNP 0008.scaffold00029 414317 1 A C - ReadM SNP 0008.scaffold00029 415065 1 A T - ReadM SNP 0008.scaffold00029 415096 1 T C - ReadM SNP 0008.scaffold00029 415168 1 A G - ReadM SNP 0008.scaffold00029 415251 1 G T - ReadM SNP 0008.scaffold00029 415494 1 A G - ReadM SNP 0008.scaffold00029 415585 1 G C - ReadM SNP 0008.scaffold00029 415793 1 T A - ReadM SNP 0008.scaffold00029 415941 1 G A - ReadM SNP 0008.scaffold00029 416223 1 A G - ReadM SNP 0008.scaffold00029 416469 1 T C - Both SNP 0008.scaffold00029 416766 1 T C scaffold8454 Both SNP 0008.scaffold00029 416908 1 G A scaffold8454 Both SNP 0008.scaffold00029 417262 1 C T scaffold8454 ScafM SNP 0008.scaffold00029 417344 1 T C scaffold8454 ScafM SNP 0008.scaffold00029 418753 1 C G scaffold9721 ScafM SNP 0008.scaffold00029 418880 1 T A scaffold9721 ReadM SNP 0008.scaffold00029 419162 1 T C - ReadM SNP 0008.scaffold00029 419263 1 A G - ReadM SNP 0008.scaffold00029 419679 1 T C - ReadM SNP 0008.scaffold00029 421600 1 G A - ReadM SNP 0008.scaffold00029 421818 1 C A - ReadM SNP 0008.scaffold00029 422004 1 C A - ReadM SNP 0008.scaffold00029 422012 1 C T - Both SNP 0008.scaffold00029 422554 1 C T scaffold9721 ScafM SNP 0008.scaffold00029 423180 1 T G scaffold9721 ReadM SNP 0008.scaffold00029 423305 1 T G - ReadM SNP 0008.scaffold00029 423432 1 T A - ReadM SNP 0008.scaffold00029 423466 1 T C - ReadM SNP 0008.scaffold00029 423670 1 G A - ScafM INDEL 0008.scaffold00029 423733 1 . C scaffold9721 ReadM SNP 0008.scaffold00029 424174 1 T C - ReadM SNP 0008.scaffold00029 424457 1 A G - ScafM INDEL 0008.scaffold00029 424592 2 .. TT scaffold9721 ScafM SNP 0008.scaffold00029 424594 1 G T scaffold9721 ScafM SNP 0008.scaffold00029 424599 1 G A scaffold9721 ReadM SNP 0008.scaffold00029 424669 1 C A - ReadM SNP 0008.scaffold00029 424840 1 T A - ReadM SNP 0008.scaffold00029 424856 1 A C - ReadM SNP 0008.scaffold00029 425527 1 A G - ReadM SNP 0008.scaffold00029 425567 1 C T - ReadM SNP 0008.scaffold00029 425635 1 C T - ReadM SNP 0008.scaffold00029 426665 1 G T - ReadM SNP 0008.scaffold00029 426717 1 C T - ReadM SNP 0008.scaffold00029 426804 1 G A - ReadM SNP 0008.scaffold00029 426877 1 A G - ReadM SNP 0008.scaffold00029 426952 1 T A - ReadM SNP 0008.scaffold00029 427031 1 G A - ReadM SNP 0008.scaffold00029 427236 1 C T - ReadM SNP 0008.scaffold00029 427315 1 A G - ReadM SNP 0008.scaffold00029 427350 1 A G - ReadM SNP 0008.scaffold00029 427507 1 G T - ReadM SNP 0008.scaffold00029 427570 1 A G - ReadM SNP 0008.scaffold00029 427575 1 T C - ReadM SNP 0008.scaffold00029 427670 1 A G - ReadM SNP 0008.scaffold00029 427758 1 A G - ReadM SNP 0008.scaffold00029 427832 1 C G - ReadM SNP 0008.scaffold00029 427875 1 G A - ReadM SNP 0008.scaffold00029 427929 1 G C - ReadM SNP 0008.scaffold00029 428150 1 A G - ReadM SNP 0008.scaffold00029 428153 1 C T - ReadM SNP 0008.scaffold00029 428158 1 G A - ReadM SNP 0008.scaffold00029 428308 1 T G - ReadM SNP 0008.scaffold00029 428411 1 A G - ReadM SNP 0008.scaffold00029 428419 1 A G - ReadM SNP 0008.scaffold00029 428538 1 G A - ReadM SNP 0008.scaffold00029 428549 1 T G - ReadM SNP 0008.scaffold00029 428569 1 C T - ReadM SNP 0008.scaffold00029 428595 1 C G - ReadM SNP 0008.scaffold00029 428656 1 C A - ReadM SNP 0008.scaffold00029 428718 1 G A - ReadM SNP 0008.scaffold00029 428848 1 A C - ReadM SNP 0008.scaffold00029 428868 1 T C - ReadM SNP 0008.scaffold00029 428897 1 G A - ReadM INDEL 0008.scaffold00029 428974 2 CG .. - ReadM SNP 0008.scaffold00029 429065 1 C A - ReadM SNP 0008.scaffold00029 429107 1 A G - ReadM SNP 0008.scaffold00029 429217 1 A G - ReadM SNP 0008.scaffold00029 429332 1 G A - ReadM SNP 0008.scaffold00029 429486 1 A G - ReadM SNP 0008.scaffold00029 429599 1 A C - ReadM SNP 0008.scaffold00029 429757 1 G A - ReadM INDEL 0008.scaffold00029 429900 1 . C - ScafM SNP 0008.scaffold00029 433584 1 G T scaffold13816 ScafM SNP 0008.scaffold00029 433595 1 T G scaffold13816 ScafM SNP 0008.scaffold00029 433600 1 A G scaffold13816 ScafM SNP 0008.scaffold00029 433606 1 G A scaffold13816 ScafM SNP 0008.scaffold00029 433612 1 T C scaffold13816 ScafM SNP 0008.scaffold00029 433702 1 C T scaffold13816 ScafM SNP 0008.scaffold00029 433748 1 A G scaffold13816 ScafM SNP 0008.scaffold00029 433780 1 A T scaffold13816 ReadM SNP 0008.scaffold00029 437837 1 C A - ReadM SNP 0008.scaffold00029 437850 1 T A - ReadM SNP 0008.scaffold00029 438128 1 A C - ReadM SNP 0008.scaffold00029 438165 1 T C - ReadM SNP 0008.scaffold00029 438213 1 A G - ReadM SNP 0008.scaffold00029 438217 1 A T - ReadM SNP 0008.scaffold00029 438341 1 A G - ReadM SNP 0008.scaffold00029 438363 1 C T - Both SNP 0008.scaffold00029 438704 1 T C scaffold9721 ReadM SNP 0008.scaffold00029 438764 1 C T - ReadM SNP 0008.scaffold00029 438791 1 G T - ScafM INDEL 0008.scaffold00029 439180 1 T . scaffold9721 ScafM INDEL 0008.scaffold00029 439191 1 A . scaffold9721 ScafM SNP 0008.scaffold00029 439241 1 A T scaffold9721 ScafM SNP 0008.scaffold00029 439415 1 C A scaffold9721 ScafM SNP 0008.scaffold00029 439432 1 T A scaffold9721 ScafM SNP 0008.scaffold00029 439438 1 G A scaffold9721 ScafM SNP 0008.scaffold00029 439444 1 A T scaffold9721 Both INDEL 0008.scaffold00029 439998 1 T . scaffold9721 Both SNP 0008.scaffold00029 440013 1 T C scaffold9721 ScafM INDEL 0008.scaffold00029 440161 1 . A scaffold9721 ReadM SNP 0008.scaffold00029 440295 1 G A - ReadM SNP 0008.scaffold00029 440316 1 T G - ReadM SNP 0008.scaffold00029 440429 1 T A - ReadM SNP 0008.scaffold00029 441234 1 G T - ReadM SNP 0008.scaffold00029 441306 1 G T - ReadM SNP 0008.scaffold00029 441319 1 A C - ReadM INDEL 0008.scaffold00029 441351 1 T . - ReadM SNP 0008.scaffold00029 441403 1 T C - ReadM SNP 0008.scaffold00029 441524 1 C T - Both SNP 0008.scaffold00029 441561 1 T A scaffold9721 ReadM SNP 0008.scaffold00029 441668 1 A T - ReadM SNP 0008.scaffold00029 441758 1 A T - ScafM SNP 0008.scaffold00029 442277 1 C T scaffold9832 Both SNP 0008.scaffold00029 442502 1 G A scaffold9832 ScafM INDEL 0008.scaffold00029 442628 1 . C scaffold9832 ReadM SNP 0008.scaffold00029 442638 1 G T - Both SNP 0008.scaffold00029 442699 1 A T scaffold9832 Both SNP 0008.scaffold00029 442711 1 C T scaffold9832 Both SNP 0008.scaffold00029 442824 1 C T scaffold9832 Both SNP 0008.scaffold00029 442851 1 G C scaffold9832 Both INDEL 0008.scaffold00029 442878 1 C . scaffold9832 Both SNP 0008.scaffold00029 442933 1 C G scaffold9832 ReadM SNP 0008.scaffold00029 443066 1 A T - ReadM SNP 0008.scaffold00029 443084 1 T G - ScafM SNP 0008.scaffold00029 444563 1 A G scaffold9832 ReadM SNP 0008.scaffold00029 444774 1 G A - ReadM SNP 0008.scaffold00029 445017 1 C T - ReadM SNP 0008.scaffold00029 445036 1 C T - ReadM SNP 0008.scaffold00029 445392 1 C A - ReadM SNP 0008.scaffold00029 445689 1 A T - ReadM SNP 0008.scaffold00029 445717 1 T A - ReadM SNP 0008.scaffold00029 446327 1 A G - ReadM SNP 0008.scaffold00029 446469 1 C A - Both SNP 0008.scaffold00029 446554 1 T A scaffold9832 Both INDEL 0008.scaffold00029 446562 1 . T scaffold9832 Both SNP 0008.scaffold00029 446613 1 A G scaffold9832 Both SNP 0008.scaffold00029 446728 1 T C scaffold9832 Both SNP 0008.scaffold00029 446908 1 C G scaffold9832 ScafM SNP 0008.scaffold00029 447088 1 T C scaffold9832 ScafM INDEL 0008.scaffold00029 448819 5 GTTAA ..... scaffold9832 ScafM INDEL 0008.scaffold00029 448825 1 T . scaffold9832 ScafM SNP 0008.scaffold00029 448900 1 C T scaffold9832 ScafM SNP 0008.scaffold00029 448903 1 C A scaffold9832 Both SNP 0008.scaffold00029 448963 1 A G scaffold9832 Both SNP 0008.scaffold00029 449022 1 G C scaffold9832 Both SNP 0008.scaffold00029 449124 1 C T scaffold9832 Both SNP 0008.scaffold00029 449213 1 A T scaffold9832 Both INDEL 0008.scaffold00029 449255 2 AA .. scaffold9832 ReadM SNP 0008.scaffold00029 449360 1 T A - ReadM SNP 0008.scaffold00029 449374 1 G C - ReadM SNP 0008.scaffold00029 449512 1 T A - ReadM SNP 0008.scaffold00029 449550 1 T G - ReadM SNP 0008.scaffold00029 449586 1 T G - ReadM SNP 0008.scaffold00029 449626 1 T C - ReadM SNP 0008.scaffold00029 449722 1 C T - ReadM SNP 0008.scaffold00029 449830 1 G T - ReadM SNP 0008.scaffold00029 449914 1 G A - ReadM SNP 0008.scaffold00029 450085 1 C T - ReadM SNP 0008.scaffold00029 450244 1 T C - ScafM SNP 0008.scaffold00029 450293 1 C A scaffold9832 ScafM SNP 0008.scaffold00029 450310 1 G A scaffold9832 ScafM SNP 0008.scaffold00029 450396 1 G A scaffold9832 ScafM INDEL 0008.scaffold00029 450553 1 G . scaffold9832 ScafM SNP 0008.scaffold00029 450605 1 T A scaffold9832 Both SNP 0008.scaffold00029 450814 1 T C scaffold9832 Both SNP 0008.scaffold00029 450820 1 A G scaffold9832 ReadM SNP 0008.scaffold00029 450863 1 G A - ReadM INDEL 0008.scaffold00029 450894 1 T . - Both SNP 0008.scaffold00029 451192 1 T C scaffold9832 ReadM SNP 0008.scaffold00029 451433 1 A G - ReadM SNP 0008.scaffold00029 451662 1 G A - ReadM SNP 0008.scaffold00029 451756 1 A G - ReadM SNP 0008.scaffold00029 451814 1 C T - ReadM SNP 0008.scaffold00029 451842 1 G A - ReadM SNP 0008.scaffold00029 451854 1 G A - ReadM SNP 0008.scaffold00029 451999 1 T C - Both SNP 0008.scaffold00029 452027 1 A G scaffold9832 Both SNP 0008.scaffold00029 452146 1 T C scaffold9832 ReadM SNP 0008.scaffold00029 452287 1 A G - ReadM SNP 0008.scaffold00029 452463 1 C T - ReadM SNP 0008.scaffold00029 452476 1 G A - ScafM SNP 0008.scaffold00029 452612 1 T C scaffold9832 ReadM SNP 0008.scaffold00029 452870 1 A G - ReadM SNP 0008.scaffold00029 453182 1 G A - ReadM SNP 0008.scaffold00029 453573 1 A T - ReadM SNP 0008.scaffold00029 453617 1 A C - ReadM SNP 0008.scaffold00029 453809 1 T C - ReadM SNP 0008.scaffold00029 454230 1 A G - ReadM SNP 0008.scaffold00029 454329 1 A T - ReadM SNP 0008.scaffold00029 454420 1 C T - ReadM SNP 0008.scaffold00029 454467 1 A G - ReadM SNP 0008.scaffold00029 454491 1 C A - ReadM SNP 0008.scaffold00029 454532 1 A T - ReadM SNP 0008.scaffold00029 454546 1 T C - ReadM SNP 0008.scaffold00029 454562 1 A T - Both SNP 0008.scaffold00029 455208 1 C A scaffold9832 Both SNP 0008.scaffold00029 455359 1 T G scaffold9832 ReadM SNP 0008.scaffold00029 456568 1 C T - ReadM SNP 0008.scaffold00029 456713 1 G A - ReadM SNP 0008.scaffold00029 456854 1 G A - ReadM SNP 0008.scaffold00029 457225 1 T C - ReadM SNP 0008.scaffold00029 457398 1 C T - ReadM SNP 0008.scaffold00029 457778 1 A G - ReadM SNP 0008.scaffold00029 457796 1 A G - ReadM SNP 0008.scaffold00029 457868 1 T C - ReadM SNP 0008.scaffold00029 458087 1 A G - ReadM INDEL 0008.scaffold00029 458162 2 .. AG - ReadM SNP 0008.scaffold00029 458907 1 G T - ReadM SNP 0008.scaffold00029 459400 1 A G - ReadM SNP 0008.scaffold00029 459579 1 A T - ReadM SNP 0008.scaffold00029 459740 1 G A - ReadM SNP 0008.scaffold00029 459751 1 G A - ReadM SNP 0008.scaffold00029 460329 1 C T - ScafM SNP 0008.scaffold00029 460336 1 G C scaffold9983 ScafM SNP 0008.scaffold00029 460341 1 T G scaffold9983 ScafM SNP 0008.scaffold00029 460343 1 T A scaffold9983 ScafM SNP 0008.scaffold00029 460350 2 GC AT scaffold9983 ScafM INDEL 0008.scaffold00029 460354 2 AG .. scaffold9983 ScafM SNP 0008.scaffold00029 460360 1 C G scaffold9983 ScafM SNP 0008.scaffold00029 460363 1 C G scaffold9983 ScafM SNP 0008.scaffold00029 460368 1 C G scaffold9983 ScafM SNP 0008.scaffold00029 460389 1 A T scaffold9983 ScafM SNP 0008.scaffold00029 460394 1 G T scaffold9983 ScafM SNP 0008.scaffold00029 460406 1 T C scaffold9983 ReadM SNP 0008.scaffold00029 460792 1 A G - ReadM SNP 0008.scaffold00029 461586 1 C T - ScafM INDEL 0008.scaffold00029 462474 4 .... AGTT scaffold32395 ScafM SNP 0008.scaffold00029 462562 1 G A scaffold32395 ScafM SNP 0008.scaffold00029 462612 1 T C scaffold32395 ScafM INDEL 0008.scaffold00029 462700 9 ......... AAGGTTGTT scaffold32395 ScafM SNP 0008.scaffold00029 462747 1 T G scaffold32395 ScafM SNP 0008.scaffold00029 462936 1 G T scaffold32395 Both SNP 0008.scaffold00029 463438 1 G A scaffold32395 Both SNP 0008.scaffold00029 463444 1 T C scaffold32395 Both SNP 0008.scaffold00029 463451 1 C T scaffold32395 ScafM INDEL 0008.scaffold00029 463627 15 ATCAGAGAAGAAGAA ............... scaffold32395 Both SNP 0008.scaffold00029 463678 1 A G scaffold32395 Both SNP 0008.scaffold00029 463686 1 C A scaffold32395 Both SNP 0008.scaffold00029 464036 1 A C scaffold32395 Both SNP 0008.scaffold00029 464048 1 A G scaffold32395 Both SNP 0008.scaffold00029 464220 1 A G scaffold32395 Both INDEL 0008.scaffold00029 464291 2 .. GT scaffold32395 Both SNP 0008.scaffold00029 464438 1 T A scaffold32395 ScafM SNP 0008.scaffold00029 464877 1 G T scaffold32395 Both SNP 0008.scaffold00029 465123 1 T A scaffold32395 ScafM SNP 0008.scaffold00029 465442 1 A G scaffold32395 Both SNP 0008.scaffold00029 465530 1 T C scaffold32395 Both SNP 0008.scaffold00029 465592 1 C A scaffold32395 Both SNP 0008.scaffold00029 465745 1 C G scaffold32395 Both SNP 0008.scaffold00029 465950 1 T A scaffold32395 ReadM SNP 0008.scaffold00029 466776 1 T G - ReadM INDEL 0008.scaffold00029 466982 1 A . - ReadM SNP 0008.scaffold00029 467010 1 G C - ReadM INDEL 0008.scaffold00029 467125 1 . A - ReadM SNP 0008.scaffold00029 467612 1 C T - ReadM SNP 0008.scaffold00029 468632 1 G A - ReadM SNP 0008.scaffold00029 468872 1 C T - ReadM SNP 0008.scaffold00029 469535 1 A G - ReadM SNP 0008.scaffold00029 469617 1 T C - ReadM SNP 0008.scaffold00029 469755 1 T C - ReadM SNP 0008.scaffold00029 470066 1 A T - ReadM SNP 0008.scaffold00029 470228 1 C G - ReadM SNP 0008.scaffold00029 470745 1 T C - ReadM SNP 0008.scaffold00029 470751 1 A G - ReadM SNP 0008.scaffold00029 470825 1 C T - ReadM SNP 0008.scaffold00029 471241 1 G C - ReadM SNP 0008.scaffold00029 471791 1 A T - ReadM INDEL 0008.scaffold00029 472094 1 A . - ReadM SNP 0008.scaffold00029 472213 1 T C - ReadM SNP 0008.scaffold00029 472668 1 C T - ReadM SNP 0008.scaffold00029 472859 1 A G - ReadM INDEL 0008.scaffold00029 473636 1 . T - ReadM SNP 0008.scaffold00029 473767 1 C A - ReadM SNP 0008.scaffold00029 473814 1 T C - Both SNP 0008.scaffold00029 474180 1 A T scaffold16613 Both SNP 0008.scaffold00029 474251 1 T C scaffold16613 Both SNP 0008.scaffold00029 474475 1 A G scaffold16613 Both SNP 0008.scaffold00029 475061 1 C T scaffold16613 Both SNP 0008.scaffold00029 476131 1 T C scaffold16613 ScafM SNP 0008.scaffold00029 476231 1 A C scaffold16613 Both SNP 0008.scaffold00029 476456 1 A G scaffold16613 ReadM SNP 0008.scaffold00029 476780 1 G A - ReadM SNP 0008.scaffold00029 476821 1 T A - ReadM SNP 0008.scaffold00029 476892 1 C T - ReadM SNP 0008.scaffold00029 477103 1 A C - ReadM INDEL 0008.scaffold00029 477610 1 . A - ReadM SNP 0008.scaffold00029 478201 1 T C - ReadM SNP 0008.scaffold00029 480420 1 T C - ReadM SNP 0008.scaffold00029 480999 1 T A - ReadM SNP 0008.scaffold00029 481056 1 G A - ReadM SNP 0008.scaffold00029 481881 1 C T - ReadM SNP 0008.scaffold00029 483191 1 T C - ReadM SNP 0008.scaffold00029 483216 1 C A - ReadM SNP 0008.scaffold00029 483954 1 C A - ReadM SNP 0008.scaffold00029 483997 1 G A - ReadM SNP 0008.scaffold00029 484544 1 G C - ReadM SNP 0008.scaffold00029 484658 1 G A - ScafM SNP 0008.scaffold00029 484758 1 C T scaffold560 ScafM SNP 0008.scaffold00029 484779 2 CT TG scaffold560 ScafM SNP 0008.scaffold00029 484786 1 A G scaffold560 ScafM SNP 0008.scaffold00029 485442 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 487927 1 T C scaffold8260 ReadM INDEL 0008.scaffold00029 488247 1 C . - Both SNP 0008.scaffold00029 488443 1 G A scaffold8260 Both SNP 0008.scaffold00029 488448 1 C T scaffold8260 Both SNP 0008.scaffold00029 488560 1 A G scaffold8260 Both SNP 0008.scaffold00029 488984 1 T A scaffold8260 Both SNP 0008.scaffold00029 489035 1 T C scaffold8260 Both SNP 0008.scaffold00029 489418 1 C T scaffold8260 Both SNP 0008.scaffold00029 489467 1 T G scaffold8260 Both SNP 0008.scaffold00029 489623 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 490052 1 G A scaffold8260 Both SNP 0008.scaffold00029 491221 1 T C scaffold8260 Both SNP 0008.scaffold00029 491339 1 C T scaffold8260 Both INDEL 0008.scaffold00029 491417 2 .. TC scaffold8260 Both SNP 0008.scaffold00029 491431 1 C T scaffold8260 Both SNP 0008.scaffold00029 491612 1 T C scaffold8260 Both INDEL 0008.scaffold00029 491654 2 .. CT scaffold8260 ScafM SNP 0008.scaffold00029 491913 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 491916 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 491923 1 A C scaffold8260 Both SNP 0008.scaffold00029 491949 1 A G scaffold8260 Both SNP 0008.scaffold00029 491994 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 492082 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 492084 1 G A scaffold8260 Both SNP 0008.scaffold00029 492166 1 A T scaffold8260 Both SNP 0008.scaffold00029 492192 1 A T scaffold8260 Both SNP 0008.scaffold00029 492196 1 T G scaffold8260 Both SNP 0008.scaffold00029 492422 1 T C scaffold8260 Both SNP 0008.scaffold00029 492426 1 G T scaffold8260 Both INDEL 0008.scaffold00029 492472 1 T . scaffold8260 Both SNP 0008.scaffold00029 492509 1 A G scaffold8260 ScafM INDEL 0008.scaffold00029 492612 1 . A scaffold8260 ScafM SNP 0008.scaffold00029 492710 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 492721 1 G C scaffold8260 ScafM SNP 0008.scaffold00029 492733 1 A G scaffold8260 Both SNP 0008.scaffold00029 492841 1 T C scaffold8260 Both SNP 0008.scaffold00029 492961 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 493081 1 T A scaffold8260 ScafM INDEL 0008.scaffold00029 493089 3 ... CAA scaffold8260 ScafM INDEL 0008.scaffold00029 493345 4 .... TTTT scaffold8260 ScafM SNP 0008.scaffold00029 493901 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 493912 1 C A scaffold8260 ScafM SNP 0008.scaffold00029 493919 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 493963 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 493966 1 T C scaffold8260 Both SNP 0008.scaffold00029 494038 1 A G scaffold8260 Both SNP 0008.scaffold00029 494361 1 A G scaffold8260 Both SNP 0008.scaffold00029 494454 1 G C scaffold8260 Both SNP 0008.scaffold00029 494460 1 T G scaffold8260 Both SNP 0008.scaffold00029 495308 1 A C scaffold8260 Both SNP 0008.scaffold00029 495665 1 A G scaffold8260 ReadM INDEL 0008.scaffold00029 496308 1 A . - ReadM INDEL 0008.scaffold00029 496392 2 TT .. - ReadM SNP 0008.scaffold00029 496494 1 C T - ReadM SNP 0008.scaffold00029 496603 1 C T - ReadM SNP 0008.scaffold00029 496645 1 T G - Both SNP 0008.scaffold00029 496833 1 G C scaffold8260 Both SNP 0008.scaffold00029 496861 1 G A scaffold8260 Both SNP 0008.scaffold00029 496950 1 C T scaffold8260 Both SNP 0008.scaffold00029 496977 1 T C scaffold8260 Both SNP 0008.scaffold00029 497014 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 497066 1 G C scaffold8260 Both SNP 0008.scaffold00029 497070 1 G A scaffold8260 Both SNP 0008.scaffold00029 497139 1 A C scaffold8260 Both SNP 0008.scaffold00029 497189 1 A G scaffold8260 ScafM INDEL 0008.scaffold00029 497222 3 TTT ... scaffold8260 ScafM SNP 0008.scaffold00029 497236 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 497256 2 AT .. scaffold8260 ScafM INDEL 0008.scaffold00029 497266 1 . A scaffold8260 ScafM INDEL 0008.scaffold00029 497272 1 . T scaffold8260 Both INDEL 0008.scaffold00029 497286 1 . A scaffold8260 Both SNP 0008.scaffold00029 497458 1 A G scaffold8260 Both SNP 0008.scaffold00029 497572 1 T C scaffold8260 Both SNP 0008.scaffold00029 497646 1 C T scaffold8260 Both SNP 0008.scaffold00029 497719 1 C G scaffold8260 Both SNP 0008.scaffold00029 497880 1 T C scaffold8260 Both SNP 0008.scaffold00029 497915 1 G A scaffold8260 Both INDEL 0008.scaffold00029 497967 3 ... CTT scaffold8260 Both SNP 0008.scaffold00029 498053 1 C T scaffold8260 Both SNP 0008.scaffold00029 498222 1 G A scaffold8260 Both SNP 0008.scaffold00029 498449 1 T G scaffold8260 Both SNP 0008.scaffold00029 498525 1 A G scaffold8260 Both SNP 0008.scaffold00029 498527 1 A G scaffold8260 Both SNP 0008.scaffold00029 498561 1 G T scaffold8260 Both SNP 0008.scaffold00029 498581 1 C T scaffold8260 Both SNP 0008.scaffold00029 498605 1 T C scaffold8260 Both SNP 0008.scaffold00029 498683 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 498738 2 AA TG scaffold8260 Both SNP 0008.scaffold00029 499045 1 C G scaffold8260 Both SNP 0008.scaffold00029 499091 1 T A scaffold8260 Both SNP 0008.scaffold00029 499111 1 C G scaffold8260 Both SNP 0008.scaffold00029 499146 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 499204 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 499216 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 499219 1 G T scaffold8260 ScafM INDEL 0008.scaffold00029 499264 10 GCGAAGAAGA .......... scaffold8260 ScafM SNP 0008.scaffold00029 499320 1 T G scaffold8260 ScafM INDEL 0008.scaffold00029 499355 30 ATTTTTTTTAGAATCAGAAAAAGGAAGGAG .............................. scaffold8260 ScafM SNP 0008.scaffold00029 499396 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 499419 2 .. GG scaffold8260 ScafM INDEL 0008.scaffold00029 499430 1 G . scaffold8260 ScafM SNP 0008.scaffold00029 499457 1 C G scaffold8260 ScafM SNP 0008.scaffold00029 499462 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 499487 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 499489 1 C G scaffold8260 ScafM SNP 0008.scaffold00029 499499 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 499540 1 G . scaffold8260 ScafM SNP 0008.scaffold00029 499568 1 G T scaffold8260 ScafM SNP 0008.scaffold00029 499892 2 CG AA scaffold3469 ScafM SNP 0008.scaffold00029 499900 1 A C scaffold3469 ScafM SNP 0008.scaffold00029 499931 1 C T scaffold3469 ScafM SNP 0008.scaffold00029 499935 1 C T scaffold3469 ScafM SNP 0008.scaffold00029 499958 1 T A scaffold3469 ScafM SNP 0008.scaffold00029 499961 1 G C scaffold3469 ScafM SNP 0008.scaffold00029 499999 1 G T scaffold3469 ScafM SNP 0008.scaffold00029 500002 1 G A scaffold3469 ScafM SNP 0008.scaffold00029 500011 1 T A scaffold3469 ScafM INDEL 0008.scaffold00029 500015 1 . T scaffold3469 ScafM SNP 0008.scaffold00029 500020 1 G A scaffold3469 ScafM SNP 0008.scaffold00029 500023 1 C T scaffold3469 ScafM SNP 0008.scaffold00029 500030 1 T G scaffold3469 ScafM SNP 0008.scaffold00029 500041 1 G A scaffold3469 ScafM SNP 0008.scaffold00029 500048 1 C T scaffold3469 ScafM SNP 0008.scaffold00029 500075 1 A G scaffold3469 ScafM SNP 0008.scaffold00029 500105 1 C G scaffold3469 ScafM SNP 0008.scaffold00029 500107 1 T G scaffold3469 ScafM SNP 0008.scaffold00029 500115 1 A G scaffold3469 ScafM SNP 0008.scaffold00029 500127 1 A C scaffold3469 ScafM SNP 0008.scaffold00029 500751 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 500762 1 G T scaffold8260 Both SNP 0008.scaffold00029 500862 1 C T scaffold8260 Both SNP 0008.scaffold00029 500868 1 T C scaffold8260 Both SNP 0008.scaffold00029 501129 1 T C scaffold8260 Both SNP 0008.scaffold00029 501177 1 T A scaffold8260 Both SNP 0008.scaffold00029 501231 1 T A scaffold8260 Both SNP 0008.scaffold00029 501247 1 T C scaffold8260 Both SNP 0008.scaffold00029 501306 1 A G scaffold8260 Both SNP 0008.scaffold00029 501414 1 A G scaffold8260 Both SNP 0008.scaffold00029 501553 1 G C scaffold8260 ReadM SNP 0008.scaffold00029 501576 1 C G - ReadM SNP 0008.scaffold00029 501605 1 A G - ReadM SNP 0008.scaffold00029 501641 1 C T - Both SNP 0008.scaffold00029 501741 1 A T scaffold8260 Both SNP 0008.scaffold00029 501804 1 A T scaffold8260 Both SNP 0008.scaffold00029 501839 1 C T scaffold8260 Both SNP 0008.scaffold00029 501939 1 T C scaffold8260 ReadM SNP 0008.scaffold00029 501973 1 T C - ReadM SNP 0008.scaffold00029 502072 1 A G - Both SNP 0008.scaffold00029 502170 1 C G scaffold8260 Both SNP 0008.scaffold00029 502180 1 T A scaffold8260 ScafM SNP 0008.scaffold00029 502394 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 502434 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 502453 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 502471 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 502532 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 502569 1 G T scaffold8260 ScafM SNP 0008.scaffold00029 503550 1 A G scaffold26818 ScafM SNP 0008.scaffold00029 503628 1 A G scaffold26818 ScafM SNP 0008.scaffold00029 503639 1 A G scaffold26818 ScafM SNP 0008.scaffold00029 503671 1 C T scaffold26818 ScafM INDEL 0008.scaffold00029 503723 1 T . scaffold26818 ReadM SNP 0008.scaffold00029 504229 1 T A - ReadM SNP 0008.scaffold00029 504516 1 T A - ReadM SNP 0008.scaffold00029 504542 1 T A - ReadM SNP 0008.scaffold00029 504558 1 C T - ReadM SNP 0008.scaffold00029 504606 1 A T - ReadM SNP 0008.scaffold00029 504663 1 T C - ReadM SNP 0008.scaffold00029 504772 1 T G - ReadM SNP 0008.scaffold00029 504815 1 G T - ReadM SNP 0008.scaffold00029 504932 1 C T - ReadM SNP 0008.scaffold00029 505068 1 A C - ReadM SNP 0008.scaffold00029 505372 1 A G - Both SNP 0008.scaffold00029 505420 1 T G scaffold8260 ScafM INDEL 0008.scaffold00029 505466 28 TTAAGTTTTACCAAAAAAAAAAGGTGAA ............................ scaffold8260 ScafM SNP 0008.scaffold00029 505505 1 G T scaffold8260 ScafM SNP 0008.scaffold00029 505508 1 C T scaffold8260 Both SNP 0008.scaffold00029 505541 1 T C scaffold8260 Both SNP 0008.scaffold00029 505586 1 C A scaffold8260 Both SNP 0008.scaffold00029 505614 1 G T scaffold8260 Both SNP 0008.scaffold00029 505688 1 G A scaffold8260 Both SNP 0008.scaffold00029 505727 1 T A scaffold8260 Both SNP 0008.scaffold00029 505916 1 C T scaffold8260 Both SNP 0008.scaffold00029 505956 1 G T scaffold8260 ScafM SNP 0008.scaffold00029 505990 1 C A scaffold8260 ScafM SNP 0008.scaffold00029 505996 2 AG GC scaffold8260 ScafM SNP 0008.scaffold00029 506011 1 C T scaffold8260 Both SNP 0008.scaffold00029 506039 1 G A scaffold8260 Both SNP 0008.scaffold00029 506097 1 A G scaffold8260 Both SNP 0008.scaffold00029 506260 1 A G scaffold8260 Both INDEL 0008.scaffold00029 506380 2 .. AT scaffold8260 Both INDEL 0008.scaffold00029 506467 1 . C scaffold8260 Both SNP 0008.scaffold00029 506495 1 A T scaffold8260 Both SNP 0008.scaffold00029 506512 1 G A scaffold8260 Both SNP 0008.scaffold00029 506570 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 506582 1 . A scaffold8260 ScafM SNP 0008.scaffold00029 506904 1 T G scaffold8260 ScafM INDEL 0008.scaffold00029 506954 8 ........ TCAAGACT scaffold8260 ScafM SNP 0008.scaffold00029 507118 1 C A scaffold8260 ScafM INDEL 0008.scaffold00029 507206 2 TA .. scaffold8260 ScafM SNP 0008.scaffold00029 507285 1 T A scaffold8260 Both SNP 0008.scaffold00029 507323 1 A T scaffold8260 Both SNP 0008.scaffold00029 507373 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 507512 4 ATTA .... scaffold8260 ScafM INDEL 0008.scaffold00029 507552 2 .. TC scaffold8260 Both SNP 0008.scaffold00029 507839 1 G A scaffold8260 Both SNP 0008.scaffold00029 507848 1 G A scaffold8260 Both SNP 0008.scaffold00029 507880 1 T G scaffold8260 Both SNP 0008.scaffold00029 507885 1 C T scaffold8260 Both SNP 0008.scaffold00029 507927 1 C G scaffold8260 ReadM SNP 0008.scaffold00029 508098 1 A C - ReadM SNP 0008.scaffold00029 508236 1 G A - ReadM INDEL 0008.scaffold00029 508276 1 . T - ReadM SNP 0008.scaffold00029 508310 1 T A - Both SNP 0008.scaffold00029 508362 1 C T scaffold8260 Both INDEL 0008.scaffold00029 508384 1 A . scaffold8260 Both SNP 0008.scaffold00029 508410 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 508568 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 508583 2 GG .. scaffold8260 ScafM SNP 0008.scaffold00029 508586 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 508594 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 508603 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 508607 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 508654 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 508657 1 G . scaffold8260 ScafM SNP 0008.scaffold00029 508668 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 508680 1 . G scaffold8260 Both SNP 0008.scaffold00029 508800 1 C A scaffold8260 Both SNP 0008.scaffold00029 508808 1 G T scaffold8260 Both SNP 0008.scaffold00029 508843 1 A T scaffold8260 Both INDEL 0008.scaffold00029 508970 1 . T scaffold8260 Both SNP 0008.scaffold00029 508995 1 A G scaffold8260 ReadM SNP 0008.scaffold00029 509020 1 A G - ReadM SNP 0008.scaffold00029 509526 1 A T - ReadM SNP 0008.scaffold00029 509684 1 C T - ReadM SNP 0008.scaffold00029 509719 1 C T - ReadM SNP 0008.scaffold00029 509994 1 G C - ReadM SNP 0008.scaffold00029 510016 1 A T - Both SNP 0008.scaffold00029 510044 1 C A scaffold8260 Both SNP 0008.scaffold00029 510086 1 T C scaffold8260 Both SNP 0008.scaffold00029 510182 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 510193 1 A . scaffold8260 ScafM SNP 0008.scaffold00029 510200 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 510222 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 510236 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 510238 1 G A scaffold8260 Both SNP 0008.scaffold00029 510255 1 G C scaffold8260 ReadM SNP 0008.scaffold00029 510400 1 A C - ReadM SNP 0008.scaffold00029 510426 1 G T - ScafM SNP 0008.scaffold00029 510527 1 G T scaffold8260 ScafM SNP 0008.scaffold00029 510550 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 510555 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 510590 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 510594 1 G C scaffold8260 ScafM SNP 0008.scaffold00029 510596 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 510598 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 510658 4 TAAG .... scaffold8260 ReadM SNP 0008.scaffold00029 510780 1 G A - ReadM SNP 0008.scaffold00029 510801 1 T A - ReadM SNP 0008.scaffold00029 510826 1 G A - ReadM SNP 0008.scaffold00029 510899 1 T G - ScafM SNP 0008.scaffold00029 510985 1 G C scaffold8260 ScafM SNP 0008.scaffold00029 511351 1 C G scaffold8260 ScafM SNP 0008.scaffold00029 511369 1 T C scaffold8260 Both SNP 0008.scaffold00029 511423 1 G T scaffold8260 Both SNP 0008.scaffold00029 511432 1 G T scaffold8260 Both SNP 0008.scaffold00029 511459 1 G A scaffold8260 Both SNP 0008.scaffold00029 511580 1 A G scaffold8260 Both SNP 0008.scaffold00029 511587 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 511602 1 A . scaffold8260 ScafM SNP 0008.scaffold00029 511604 2 TG CT scaffold8260 ScafM INDEL 0008.scaffold00029 511618 2 .. TT scaffold8260 ScafM SNP 0008.scaffold00029 511624 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 511628 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 511634 1 A T scaffold8260 Both SNP 0008.scaffold00029 512170 1 A T scaffold8260 Both INDEL 0008.scaffold00029 512195 1 G . scaffold8260 Both SNP 0008.scaffold00029 512199 1 G C scaffold8260 Both SNP 0008.scaffold00029 512225 1 G T scaffold8260 Both INDEL 0008.scaffold00029 512240 1 A . scaffold8260 ScafM SNP 0008.scaffold00029 512243 1 A G scaffold8260 Both INDEL 0008.scaffold00029 512363 1 . T scaffold8260 ScafM SNP 0008.scaffold00029 512375 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 512394 2 GC AT scaffold8260 Both SNP 0008.scaffold00029 512461 1 A C scaffold8260 Both SNP 0008.scaffold00029 512474 1 G A scaffold8260 Both SNP 0008.scaffold00029 512518 1 G T scaffold8260 Both SNP 0008.scaffold00029 512544 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 512610 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 512615 2 .. TT scaffold8260 ScafM SNP 0008.scaffold00029 512629 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 512631 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 512654 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 512658 1 C T scaffold8260 Both SNP 0008.scaffold00029 512716 1 A T scaffold8260 ReadM SNP 0008.scaffold00029 512803 1 T C - ReadM SNP 0008.scaffold00029 512813 1 T C - ReadM SNP 0008.scaffold00029 512836 1 C T - ReadM SNP 0008.scaffold00029 512853 1 T C - ReadM SNP 0008.scaffold00029 513649 1 A T - ScafM SNP 0008.scaffold00029 513902 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 513905 1 T A scaffold8260 ScafM SNP 0008.scaffold00029 513925 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 513929 4 .... ATTC scaffold8260 ScafM SNP 0008.scaffold00029 513933 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 513935 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 513943 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 513957 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 513962 1 . T scaffold8260 ScafM SNP 0008.scaffold00029 513984 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 513996 1 T . scaffold8260 ScafM SNP 0008.scaffold00029 514012 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 514043 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 514051 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514106 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 514115 2 GG AA scaffold8260 ScafM SNP 0008.scaffold00029 514120 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 514328 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 514335 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514358 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 514387 1 . T scaffold8260 ScafM INDEL 0008.scaffold00029 514403 11 AGAGGCCATTA ........... scaffold8260 ScafM SNP 0008.scaffold00029 514422 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514467 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 514477 4 .... CTCG scaffold8260 ScafM SNP 0008.scaffold00029 514488 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514507 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 514581 1 T C scaffold8260 ScafM INDEL 0008.scaffold00029 514588 7 CTTTTAA ....... scaffold8260 ScafM INDEL 0008.scaffold00029 514622 2 .. AT scaffold8260 ScafM SNP 0008.scaffold00029 514631 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 514675 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 514714 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 514804 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 514818 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514821 1 T A scaffold8260 ScafM SNP 0008.scaffold00029 514823 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 514838 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 514865 2 GA AG scaffold8260 ScafM SNP 0008.scaffold00029 514868 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 514897 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 514917 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 514924 1 T A scaffold8260 ScafM SNP 0008.scaffold00029 515026 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 515029 1 A G scaffold8260 ScafM INDEL 0008.scaffold00029 515037 1 A . scaffold8260 ScafM SNP 0008.scaffold00029 515057 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 515060 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 515063 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 515066 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 515074 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 515102 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 515144 1 G T scaffold8260 Both INDEL 0008.scaffold00029 515175 1 . T scaffold8260 ScafM SNP 0008.scaffold00029 515279 1 A T scaffold8260 ScafM INDEL 0008.scaffold00029 515284 1 T . scaffold8260 ScafM SNP 0008.scaffold00029 515341 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 515366 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 515397 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 515400 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 515408 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 515470 3 ACC GAT scaffold8260 ScafM SNP 0008.scaffold00029 515542 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 515564 1 C G scaffold8260 ScafM SNP 0008.scaffold00029 515567 1 T G scaffold8260 ReadM SNP 0008.scaffold00029 515771 1 T C - ReadM SNP 0008.scaffold00029 515816 1 A G - ReadM SNP 0008.scaffold00029 515823 1 G A - ScafM SNP 0008.scaffold00029 515959 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 515968 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 515973 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 515997 1 C T scaffold8260 Both SNP 0008.scaffold00029 516000 1 T C scaffold8260 Both SNP 0008.scaffold00029 516058 1 T C scaffold8260 Both INDEL 0008.scaffold00029 516111 1 C . scaffold8260 Both SNP 0008.scaffold00029 516148 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 516165 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 516171 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 516199 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 516216 1 C A scaffold8260 ScafM SNP 0008.scaffold00029 516218 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 516245 1 T A scaffold8260 ScafM SNP 0008.scaffold00029 516257 1 C A scaffold8260 ScafM SNP 0008.scaffold00029 516276 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 516300 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 516307 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 516316 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 516364 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 516375 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 516379 2 AC GT scaffold8260 ScafM INDEL 0008.scaffold00029 516392 5 .CCCC GGGAG scaffold8260 ScafM SNP 0008.scaffold00029 516407 2 GG AC scaffold8260 ScafM SNP 0008.scaffold00029 516414 1 C T scaffold8260 ScafM INDEL 0008.scaffold00029 516415 1 . C scaffold8260 ScafM SNP 0008.scaffold00029 516417 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 516440 1 G A scaffold8260 ScafM INDEL 0008.scaffold00029 516447 11 TTTCTCGAGAG ........... scaffold8260 ScafM SNP 0008.scaffold00029 516487 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 516522 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 516525 2 TT GA scaffold8260 ScafM SNP 0008.scaffold00029 516547 2 AG CT scaffold8260 ScafM SNP 0008.scaffold00029 516559 1 C T scaffold8260 ScafM SNP 0008.scaffold00029 516588 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 516638 1 A G scaffold8260 ReadM SNP 0008.scaffold00029 516766 1 A C - ReadM SNP 0008.scaffold00029 516786 1 A G - ScafM SNP 0008.scaffold00029 517077 1 A C scaffold8260 ScafM SNP 0008.scaffold00029 517090 1 A G scaffold8260 ScafM SNP 0008.scaffold00029 517107 1 T C scaffold8260 ScafM SNP 0008.scaffold00029 517112 1 T G scaffold8260 ScafM SNP 0008.scaffold00029 517129 1 C A scaffold8260 ScafM SNP 0008.scaffold00029 517155 2 CC TT scaffold8260 ScafM SNP 0008.scaffold00029 517160 1 C A scaffold8260 ScafM INDEL 0008.scaffold00029 517171 2 AC .. scaffold8260 ScafM SNP 0008.scaffold00029 517576 1 A T scaffold8260 ScafM SNP 0008.scaffold00029 517578 1 G A scaffold8260 ScafM SNP 0008.scaffold00029 517834 1 C T scaffold23 ScafM SNP 0008.scaffold00029 517851 1 A T scaffold23 ScafM SNP 0008.scaffold00029 517898 1 G A scaffold23 ScafM SNP 0008.scaffold00029 517963 1 C T scaffold23 ScafM SNP 0008.scaffold00029 517967 1 A C scaffold23 ScafM SNP 0008.scaffold00029 518017 1 A C scaffold23 ScafM INDEL 0008.scaffold00029 518033 3 .AA TTT scaffold23 ScafM SNP 0008.scaffold00029 518069 1 T C scaffold23 ScafM SNP 0008.scaffold00029 518145 1 T C scaffold23 Both SNP 0008.scaffold00029 518192 1 T A scaffold23 ScafM INDEL 0008.scaffold00029 518336 1 A . scaffold23 ScafM SNP 0008.scaffold00029 518365 1 G T scaffold23 ScafM INDEL 0008.scaffold00029 518416 1 T . scaffold23 Both SNP 0008.scaffold00029 519099 1 A T scaffold23 Both SNP 0008.scaffold00029 519140 1 G T scaffold23 Both SNP 0008.scaffold00029 519330 1 C T scaffold23 Both SNP 0008.scaffold00029 519824 1 T A scaffold23 ScafM INDEL 0008.scaffold00029 519962 4 TGAT .... scaffold23 ScafM SNP 0008.scaffold00029 519976 1 T G scaffold23 ScafM SNP 0008.scaffold00029 519986 1 T C scaffold23 Both SNP 0008.scaffold00029 520179 1 C T scaffold23 Both SNP 0008.scaffold00029 520213 1 C A scaffold23 ScafM INDEL 0008.scaffold00029 520239 6 ...... AATTTT scaffold23 ScafM INDEL 0008.scaffold00029 520397 3 ... CCT scaffold23 ScafM SNP 0008.scaffold00029 520422 1 A G scaffold23 ScafM INDEL 0008.scaffold00029 520571 1 . C scaffold23 Both INDEL 0008.scaffold00029 520597 2 AT .. scaffold23 ScafM INDEL 0008.scaffold00029 520955 10 .......... TTTTTTTTTT scaffold23 Both SNP 0008.scaffold00029 521430 1 G C scaffold23 Both SNP 0008.scaffold00029 521804 1 T A scaffold23 Both SNP 0008.scaffold00029 521912 1 A G scaffold23 Both INDEL 0008.scaffold00029 522094 2 TT .. scaffold23 ReadM SNP 0008.scaffold00029 522294 1 A C - ReadM SNP 0008.scaffold00029 522312 1 G A - ReadM SNP 0008.scaffold00029 522473 1 C T - ReadM SNP 0008.scaffold00029 522482 1 A G - ReadM SNP 0008.scaffold00029 522526 1 G T - ReadM SNP 0008.scaffold00029 522694 1 C T - Both SNP 0008.scaffold00029 522970 1 G C scaffold23 Both SNP 0008.scaffold00029 523004 1 C T scaffold23 ScafM SNP 0008.scaffold00029 523023 1 C T scaffold23 ScafM INDEL 0008.scaffold00029 523037 2 .. AA scaffold23 Both INDEL 0008.scaffold00029 523074 2 TG .. scaffold23 Both SNP 0008.scaffold00029 523232 1 A G scaffold23 Both INDEL 0008.scaffold00029 523290 1 A . scaffold23 Both SNP 0008.scaffold00029 523320 1 C T scaffold23 Both SNP 0008.scaffold00029 523340 1 G A scaffold23 Both INDEL 0008.scaffold00029 523486 1 . A scaffold23 Both SNP 0008.scaffold00029 523527 1 C T scaffold23 Both SNP 0008.scaffold00029 523567 1 C T scaffold23 Both SNP 0008.scaffold00029 523573 1 C T scaffold23 ScafM INDEL 0008.scaffold00029 523632 3 TAT ... scaffold23 ScafM SNP 0008.scaffold00029 523666 1 G T scaffold23 ScafM SNP 0008.scaffold00029 523766 1 A G scaffold23 Both SNP 0008.scaffold00029 523907 1 A G scaffold23 ScafM INDEL 0008.scaffold00029 524004 5 AATTT ..... scaffold23 ScafM SNP 0008.scaffold00029 524119 1 C A scaffold23 ScafM INDEL 0008.scaffold00029 524159 1 G . scaffold23 ScafM SNP 0008.scaffold00029 524213 1 C T scaffold23 ScafM SNP 0008.scaffold00029 524248 1 A C scaffold23 ScafM SNP 0008.scaffold00029 524270 1 G C scaffold23 ScafM SNP 0008.scaffold00029 524289 1 G C scaffold23 ScafM SNP 0008.scaffold00029 524291 1 G C scaffold23 ScafM SNP 0008.scaffold00029 524407 1 T C scaffold23 ScafM SNP 0008.scaffold00029 524417 1 C T scaffold23 Both SNP 0008.scaffold00029 524489 1 A G scaffold23 ScafM SNP 0008.scaffold00029 524593 1 A G scaffold23 ScafM SNP 0008.scaffold00029 524595 1 A G scaffold23 ScafM SNP 0008.scaffold00029 524604 1 C T scaffold23 ScafM INDEL 0008.scaffold00029 524618 34 CAGTTTGATAAAATTAAATATGGAAAAGTACCAC .................................. scaffold23 ScafM SNP 0008.scaffold00029 524721 1 C T scaffold23 ScafM SNP 0008.scaffold00029 524745 1 T G scaffold23 Both SNP 0008.scaffold00029 524789 1 T C scaffold23 Both SNP 0008.scaffold00029 524832 1 C T scaffold23 Both INDEL 0008.scaffold00029 524848 1 A . scaffold23 Both SNP 0008.scaffold00029 525099 1 G A scaffold23 ScafM SNP 0008.scaffold00029 525122 1 G T scaffold23 ScafM SNP 0008.scaffold00029 525149 1 G A scaffold23 Both SNP 0008.scaffold00029 525333 1 A G scaffold23 ScafM SNP 0008.scaffold00029 525431 1 G C scaffold23 ScafM INDEL 0008.scaffold00029 525453 13 TTCGTATCTGCAA ............. scaffold23 ScafM INDEL 0008.scaffold00029 525470 3 GCG ... scaffold23 ScafM INDEL 0008.scaffold00029 525474 2 AG .. scaffold23 ScafM INDEL 0008.scaffold00029 525477 2 GA .. scaffold23 ScafM SNP 0008.scaffold00029 525514 1 G A scaffold23 ScafM SNP 0008.scaffold00029 525521 1 A G scaffold23 ScafM SNP 0008.scaffold00029 525977 1 C T scaffold3226 ScafM INDEL 0008.scaffold00029 525986 4 GCTA .... scaffold3226 ScafM SNP 0008.scaffold00029 526039 1 T C scaffold3226 ScafM SNP 0008.scaffold00029 526044 1 A C scaffold3226 ScafM SNP 0008.scaffold00029 526068 2 TC CA scaffold3226 ScafM SNP 0008.scaffold00029 526098 1 T A scaffold3226 ScafM SNP 0008.scaffold00029 526127 1 C T scaffold3226 ScafM SNP 0008.scaffold00029 526139 1 A C scaffold3226 ScafM INDEL 0008.scaffold00029 526155 16 CAAAGGTTGTGCTGTT ................ scaffold3226 ScafM SNP 0008.scaffold00029 526188 1 G A scaffold3226 ScafM SNP 0008.scaffold00029 526249 1 A G scaffold3226 ScafM SNP 0008.scaffold00029 526259 1 T C scaffold3226 ScafM SNP 0008.scaffold00029 526337 1 A G scaffold3226 ScafM SNP 0008.scaffold00029 526401 1 A G scaffold3226 Both SNP 0008.scaffold00029 527140 1 C T scaffold23 Both SNP 0008.scaffold00029 527297 1 C T scaffold23 Both SNP 0008.scaffold00029 527345 1 C T scaffold23 Both SNP 0008.scaffold00029 527348 1 C T scaffold23 Both SNP 0008.scaffold00029 527407 1 T C scaffold23 Both SNP 0008.scaffold00029 527414 1 G A scaffold23 Both SNP 0008.scaffold00029 527477 1 C T scaffold23 Both SNP 0008.scaffold00029 527552 1 C G scaffold23 ScafM SNP 0008.scaffold00029 527599 1 G A scaffold23 ScafM SNP 0008.scaffold00029 527606 1 A G scaffold23 ScafM SNP 0008.scaffold00029 527619 1 A T scaffold23 ScafM SNP 0008.scaffold00029 527624 2 GT CC scaffold23 ScafM SNP 0008.scaffold00029 527630 1 T C scaffold23 ScafM SNP 0008.scaffold00029 527636 1 C T scaffold23 ScafM SNP 0008.scaffold00029 527639 1 C A scaffold23 ScafM SNP 0008.scaffold00029 527654 1 C T scaffold23 ScafM SNP 0008.scaffold00029 527663 1 A G scaffold23 ScafM SNP 0008.scaffold00029 527717 1 T G scaffold23 ScafM SNP 0008.scaffold00029 527815 2 AC CA scaffold23 ScafM SNP 0008.scaffold00029 527867 1 G A scaffold23 Both SNP 0008.scaffold00029 527941 1 C T scaffold23 ScafM SNP 0008.scaffold00029 528137 1 G T scaffold23 ScafM INDEL 0008.scaffold00029 528226 1 T . scaffold23 ScafM INDEL 0008.scaffold00029 528268 3 ... AAG scaffold23 ScafM INDEL 0008.scaffold00029 528310 1 A . scaffold23 ScafM INDEL 0008.scaffold00029 528335 1 . T scaffold23 ScafM SNP 0008.scaffold00029 530287 1 T G scaffold23 ScafM SNP 0008.scaffold00029 530291 1 T A scaffold23 ScafM INDEL 0008.scaffold00029 530295 1 A . scaffold23 ScafM SNP 0008.scaffold00029 530299 1 C T scaffold23 ScafM SNP 0008.scaffold00029 530313 2 GG AC scaffold23 ScafM SNP 0008.scaffold00029 530317 1 G C scaffold23 ScafM SNP 0008.scaffold00029 530321 1 T C scaffold23 ScafM SNP 0008.scaffold00029 530323 1 C A scaffold23 ScafM SNP 0008.scaffold00029 530330 1 A G scaffold23 ScafM SNP 0008.scaffold00029 530347 1 G A scaffold23 ScafM SNP 0008.scaffold00029 530353 1 T C scaffold23 ScafM INDEL 0008.scaffold00029 530355 1 A . scaffold23 ScafM SNP 0008.scaffold00029 530423 1 G A scaffold23 ScafM INDEL 0008.scaffold00029 530426 3 GGT ... scaffold23 ScafM INDEL 0008.scaffold00029 530435 3 ... CCA scaffold23 ScafM SNP 0008.scaffold00029 530436 1 T C scaffold23 ScafM SNP 0008.scaffold00029 530440 5 GGGGG CCCAC scaffold23 ScafM SNP 0008.scaffold00029 530489 1 T G scaffold23 ReadM SNP 0008.scaffold00029 531757 1 T A - ReadM SNP 0008.scaffold00029 531776 1 C T - ScafM SNP 0008.scaffold00029 532637 1 A T scaffold18737 ScafM SNP 0008.scaffold00029 532681 1 A T scaffold18737 ScafM SNP 0008.scaffold00029 532687 1 G T scaffold18737 ScafM SNP 0008.scaffold00029 532691 1 C T scaffold18737 ScafM INDEL 0008.scaffold00029 532708 9 ......... TTTTAATTT scaffold18737 ScafM INDEL 0008.scaffold00029 532709 1 . T scaffold18737 ScafM SNP 0008.scaffold00029 532727 1 T C scaffold18737 ScafM INDEL 0008.scaffold00029 535929 1 . A scaffold23 ScafM SNP 0008.scaffold00029 535950 1 G A scaffold23 ScafM SNP 0008.scaffold00029 535966 1 T C scaffold23 ScafM SNP 0008.scaffold00029 535975 1 A G scaffold23 ScafM INDEL 0008.scaffold00029 535978 1 G . scaffold23 ScafM INDEL 0008.scaffold00029 535984 3 ATC ... scaffold23 ScafM INDEL 0008.scaffold00029 535991 5 AACAG ..... scaffold23 ScafM INDEL 0008.scaffold00029 536003 2 .A CT scaffold23 ScafM SNP 0008.scaffold00029 536010 1 G A scaffold23 ScafM SNP 0008.scaffold00029 536022 1 T C scaffold23 ScafM SNP 0008.scaffold00029 536034 1 A T scaffold23 ScafM SNP 0008.scaffold00029 536054 1 A G scaffold23 ScafM SNP 0008.scaffold00029 536056 1 A G scaffold23 ScafM SNP 0008.scaffold00029 536059 1 G A scaffold23 ScafM SNP 0008.scaffold00029 536080 2 CG AC scaffold23 ScafM INDEL 0008.scaffold00029 536106 2 TA .. scaffold23 ScafM INDEL 0008.scaffold00029 536122 1 C . scaffold23 ScafM SNP 0008.scaffold00029 536124 1 T A scaffold23 ScafM SNP 0008.scaffold00029 536138 1 C T scaffold23 ScafM SNP 0008.scaffold00029 536145 1 A T scaffold23 ScafM SNP 0008.scaffold00029 536152 1 C T scaffold23 ScafM INDEL 0008.scaffold00029 536174 1 . A scaffold23 ScafM SNP 0008.scaffold00029 536178 1 C T scaffold23 ScafM SNP 0008.scaffold00029 536190 1 C T scaffold23 ScafM SNP 0008.scaffold00029 536197 1 G C scaffold23 ScafM INDEL 0008.scaffold00029 536203 1 . T scaffold23 ScafM SNP 0008.scaffold00029 536208 2 TA AC scaffold23 ScafM INDEL 0008.scaffold00029 536211 1 . C scaffold23 ScafM SNP 0008.scaffold00029 536227 3 TCA CTT scaffold23 ScafM SNP 0008.scaffold00029 536240 1 T C scaffold23 ScafM INDEL 0008.scaffold00029 536248 1 . T scaffold23 ScafM INDEL 0008.scaffold00029 536288 7 CAATTAT ....... scaffold23 ScafM INDEL 0008.scaffold00029 536298 7 TTTCTAA ....... scaffold23 ScafM SNP 0008.scaffold00029 536321 1 C A scaffold23 ScafM SNP 0008.scaffold00029 536326 1 G C scaffold23 ScafM SNP 0008.scaffold00029 536344 1 C G scaffold23 ScafM SNP 0008.scaffold00029 536918 1 T G scaffold22537 ScafM SNP 0008.scaffold00029 536981 1 G T scaffold22537 ScafM SNP 0008.scaffold00029 536995 1 A T scaffold22537 ScafM SNP 0008.scaffold00029 537000 1 C A scaffold22537 ScafM SNP 0008.scaffold00029 537005 1 G T scaffold22537 ScafM SNP 0008.scaffold00029 537026 1 T C scaffold22537 ScafM SNP 0008.scaffold00029 537035 1 T G scaffold22537 ScafM SNP 0008.scaffold00029 537044 1 G T scaffold22537 ScafM SNP 0008.scaffold00029 537049 1 C A scaffold22537 ScafM SNP 0008.scaffold00029 537064 1 T G scaffold22537 ScafM SNP 0008.scaffold00029 537079 1 C A scaffold22537 ScafM SNP 0008.scaffold00029 537087 1 G T scaffold22537 ScafM SNP 0008.scaffold00029 537207 1 C G scaffold22537 ScafM SNP 0008.scaffold00029 546132 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546138 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 546154 1 G T scaffold6516 ScafM SNP 0008.scaffold00029 546171 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 546175 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546188 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 546217 1 T C scaffold6516 ScafM INDEL 0008.scaffold00029 546225 1 A . scaffold6516 ScafM INDEL 0008.scaffold00029 546227 4 TTGT .... scaffold6516 ScafM INDEL 0008.scaffold00029 546233 1 A . scaffold6516 ScafM INDEL 0008.scaffold00029 546238 2 GT .. scaffold6516 ScafM INDEL 0008.scaffold00029 546244 7 TACAAGT ....... scaffold6516 ScafM INDEL 0008.scaffold00029 546257 1 T . scaffold6516 ScafM SNP 0008.scaffold00029 546261 1 C A scaffold6516 ScafM INDEL 0008.scaffold00029 546287 4 CCTA .... scaffold6516 ScafM SNP 0008.scaffold00029 546292 1 G C scaffold6516 ScafM SNP 0008.scaffold00029 546298 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 546314 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 546334 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 546358 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546364 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 546372 1 C A scaffold6516 ScafM SNP 0008.scaffold00029 546379 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546403 1 C T scaffold6516 Both SNP 0008.scaffold00029 546517 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 546562 1 A C scaffold6516 Both SNP 0008.scaffold00029 546668 1 A G scaffold6516 Both SNP 0008.scaffold00029 546754 1 A G scaffold6516 Both SNP 0008.scaffold00029 546768 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546831 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 546835 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 546847 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 546856 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 546886 1 G T scaffold6516 ScafM SNP 0008.scaffold00029 546949 1 G C scaffold6516 ScafM SNP 0008.scaffold00029 546961 1 T A scaffold6516 Both SNP 0008.scaffold00029 546967 1 A G scaffold6516 Both SNP 0008.scaffold00029 547120 1 A T scaffold6516 Both SNP 0008.scaffold00029 547167 1 C T scaffold6516 Both SNP 0008.scaffold00029 547270 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 547297 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 547303 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 547394 1 T A scaffold6516 ScafM INDEL 0008.scaffold00029 547404 2 .T AA scaffold6516 ScafM INDEL 0008.scaffold00029 547544 1 T . scaffold6516 ScafM INDEL 0008.scaffold00029 547548 1 A . scaffold6516 Both SNP 0008.scaffold00029 547580 1 T A scaffold6516 Both SNP 0008.scaffold00029 547668 1 G T scaffold6516 ScafM SNP 0008.scaffold00029 547737 1 A G scaffold6516 ScafM INDEL 0008.scaffold00029 547766 8 ........ GACTGAGT scaffold6516 ScafM SNP 0008.scaffold00029 547781 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 547808 1 C G scaffold6516 ScafM SNP 0008.scaffold00029 547811 1 A G scaffold6516 ScafM INDEL 0008.scaffold00029 547825 5 GGCCT ..... scaffold6516 ScafM INDEL 0008.scaffold00029 547835 6 TGTCAT ...... scaffold6516 ScafM INDEL 0008.scaffold00029 547860 1 . A scaffold6516 ScafM SNP 0008.scaffold00029 547863 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 547868 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 547922 1 G C scaffold6516 ScafM INDEL 0008.scaffold00029 547936 1 . T scaffold6516 ScafM SNP 0008.scaffold00029 547940 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 547947 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 548048 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 548061 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 548064 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 548089 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 548095 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 548109 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 548129 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 548139 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 548432 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 548451 2 AA GG scaffold6516 ScafM INDEL 0008.scaffold00029 548471 5 ..... GTACC scaffold6516 ScafM INDEL 0008.scaffold00029 548473 2 .. CG scaffold6516 ScafM SNP 0008.scaffold00029 548488 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 548512 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 548517 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 548529 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 548534 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 548538 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 548545 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 548550 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 548563 1 C T scaffold6516 ScafM INDEL 0008.scaffold00029 548584 1 G . scaffold6516 ScafM SNP 0008.scaffold00029 549296 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 549302 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 549304 2 AT GC scaffold6516 ScafM SNP 0008.scaffold00029 549341 1 C G scaffold6516 ScafM SNP 0008.scaffold00029 549349 1 A G scaffold6516 ScafM INDEL 0008.scaffold00029 549372 5 ATTAA ..... scaffold6516 ScafM SNP 0008.scaffold00029 549385 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 549387 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 549411 1 G C scaffold6516 ScafM SNP 0008.scaffold00029 549424 1 C A scaffold6516 ScafM SNP 0008.scaffold00029 549450 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 549454 2 AG TT scaffold6516 ScafM INDEL 0008.scaffold00029 549457 1 C . scaffold6516 ScafM SNP 0008.scaffold00029 549463 2 TG AT scaffold6516 ScafM SNP 0008.scaffold00029 549471 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 549481 1 C G scaffold6516 ScafM SNP 0008.scaffold00029 549492 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 549497 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 549507 2 CG AC scaffold6516 ScafM INDEL 0008.scaffold00029 549517 10 GTGAAACCCC .......... scaffold6516 ScafM SNP 0008.scaffold00029 549529 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 549573 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 549583 2 CT TC scaffold6516 ScafM SNP 0008.scaffold00029 549615 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 549644 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 549671 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 549684 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 549716 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 549744 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 550053 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 550064 2 TG AT scaffold6516 ScafM SNP 0008.scaffold00029 550119 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 550170 1 G T scaffold6516 ScafM SNP 0008.scaffold00029 550175 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 550185 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 550462 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 550469 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 550482 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 550509 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 550521 2 TA CC scaffold6516 ScafM SNP 0008.scaffold00029 550529 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 550537 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 550539 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 550544 2 AT CC scaffold6516 ScafM SNP 0008.scaffold00029 550558 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 550565 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 550585 1 T A scaffold6516 ScafM SNP 0008.scaffold00029 550623 1 C G scaffold6516 ScafM INDEL 0008.scaffold00029 550635 7 ......A TGGGGCT scaffold6516 ScafM SNP 0008.scaffold00029 550675 1 G T scaffold6516 ScafM INDEL 0008.scaffold00029 550687 1 G . scaffold6516 ScafM SNP 0008.scaffold00029 550725 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 550752 2 AC GG scaffold6516 ScafM SNP 0008.scaffold00029 550764 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 550798 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 550809 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 550811 1 C G scaffold6516 ScafM SNP 0008.scaffold00029 550831 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 550834 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 550865 2 CT TA scaffold6516 ScafM SNP 0008.scaffold00029 550870 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 550872 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 550876 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 554791 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 554802 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 554830 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 554859 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 554899 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 554913 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 554926 1 T C scaffold6516 ScafM INDEL 0008.scaffold00029 554935 4 ACGA .... scaffold6516 ScafM SNP 0008.scaffold00029 556348 1 G T scaffold6516 ScafM SNP 0008.scaffold00029 556697 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 556703 1 A C scaffold6516 ScafM SNP 0008.scaffold00029 556710 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 556719 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 556721 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 556756 1 A G scaffold6516 ScafM INDEL 0008.scaffold00029 556764 1 . T scaffold6516 ScafM SNP 0008.scaffold00029 556780 1 C T scaffold6516 ScafM SNP 0008.scaffold00029 556797 1 T G scaffold6516 ScafM SNP 0008.scaffold00029 556824 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 556831 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 556866 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 556902 1 T C scaffold6516 ScafM INDEL 0008.scaffold00029 556946 8 ........ GCCTTATT scaffold6516 ScafM INDEL 0008.scaffold00029 556978 8 CAATTGTA ........ scaffold6516 ScafM SNP 0008.scaffold00029 556997 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 557042 1 A G scaffold6516 ScafM SNP 0008.scaffold00029 560858 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 561265 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 561267 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 561300 1 G A scaffold6516 ScafM INDEL 0008.scaffold00029 561309 5 AAATA ....G scaffold6516 ScafM INDEL 0008.scaffold00029 561323 3 GCC ... scaffold6516 ScafM INDEL 0008.scaffold00029 561334 8 TACATAGC ........ scaffold6516 ScafM SNP 0008.scaffold00029 561359 1 G A scaffold6516 ScafM SNP 0008.scaffold00029 561458 1 T C scaffold6516 ScafM SNP 0008.scaffold00029 561461 1 G A scaffold6516 ScafM INDEL 0008.scaffold00029 561489 7 ....... GGCCAAG scaffold6516 ScafM SNP 0008.scaffold00029 561502 1 C G scaffold6516 ScafM SNP 0008.scaffold00029 561527 1 A T scaffold6516 ScafM SNP 0008.scaffold00029 563567 1 C T C13913566 ScafM SNP 0008.scaffold00029 563575 3 CAG TGA C13913566 Both SNP 0008.scaffold00029 563633 1 A G C13913566 ScafM SNP 0008.scaffold00029 563723 1 G T C13913566 ScafM INDEL 0008.scaffold00029 563798 30 CCCCTCGCCACCAGCCATTATCTCTCTCCT .............................. C13913566 ScafM SNP 0008.scaffold00029 563836 1 A G C13913566 ReadM INDEL 0008.scaffold00029 563908 1 . G - ReadM SNP 0008.scaffold00029 563949 1 T C - ReadM INDEL 0008.scaffold00029 563964 1 . A - ReadM SNP 0008.scaffold00029 563975 1 A G - ReadM INDEL 0008.scaffold00029 564520 1 T . - Both SNP 0008.scaffold00029 564606 1 A G C13913566 ReadM SNP 0008.scaffold00029 564730 1 A C - ReadM SNP 0008.scaffold00029 564945 1 A C - ReadM SNP 0008.scaffold00029 564980 1 T C - ReadM SNP 0008.scaffold00029 565112 1 A G - ReadM SNP 0008.scaffold00029 565333 1 A T - ReadM SNP 0008.scaffold00029 565384 1 G A - ReadM SNP 0008.scaffold00029 565390 1 A T - ReadM SNP 0008.scaffold00029 565468 1 G A - ReadM SNP 0008.scaffold00029 565581 1 A C - ReadM SNP 0008.scaffold00029 565677 1 C T - ReadM SNP 0008.scaffold00029 565679 1 G A - ReadM SNP 0008.scaffold00029 565742 1 G T - ReadM SNP 0008.scaffold00029 565782 1 T C - Both INDEL 0008.scaffold00029 565934 1 A . scaffold10404 Both SNP 0008.scaffold00029 566100 1 T C scaffold10404 ReadM INDEL 0008.scaffold00029 566189 2 AT .. - ReadM SNP 0008.scaffold00029 566225 1 G T - ScafM SNP 0008.scaffold00029 567155 1 C T scaffold10404 ScafM INDEL 0008.scaffold00029 567177 1 . A scaffold10404 ScafM SNP 0008.scaffold00029 567179 2 AT TA scaffold10404 ScafM SNP 0008.scaffold00029 567217 1 T A scaffold10404 ScafM SNP 0008.scaffold00029 567260 1 A C scaffold10404 ScafM SNP 0008.scaffold00029 567315 1 G T scaffold10404 ScafM INDEL 0008.scaffold00029 567345 1 T . scaffold10404 ScafM INDEL 0008.scaffold00029 567380 4 .... TATA scaffold10404 ScafM SNP 0008.scaffold00029 567414 1 T C scaffold10404 ScafM SNP 0008.scaffold00029 567427 1 A G scaffold10404 ScafM INDEL 0008.scaffold00029 567729 1 . C scaffold10404 Both SNP 0008.scaffold00029 568075 1 A C scaffold10404 Both INDEL 0008.scaffold00029 568244 3 ATT ... scaffold10404 Both SNP 0008.scaffold00029 568353 1 G A scaffold10404 Both SNP 0008.scaffold00029 568365 1 C T scaffold10404 Both SNP 0008.scaffold00029 568442 1 C T scaffold10404 Both SNP 0008.scaffold00029 568484 1 A C scaffold10404 ScafM INDEL 0008.scaffold00029 568532 1 G . scaffold10404 Both SNP 0008.scaffold00029 568616 1 T C scaffold10404 Both INDEL 0008.scaffold00029 568743 2 AA .. scaffold10404 Both SNP 0008.scaffold00029 568820 1 A G scaffold10404 Both SNP 0008.scaffold00029 568853 1 A G scaffold10404 ScafM SNP 0008.scaffold00029 568868 1 C T scaffold10404 ScafM SNP 0008.scaffold00029 568889 1 A G scaffold10404 ScafM INDEL 0008.scaffold00029 568924 1 A . scaffold10404 ScafM SNP 0008.scaffold00029 568935 1 T A scaffold10404 ScafM SNP 0008.scaffold00029 568963 1 A C scaffold10404 ScafM SNP 0008.scaffold00029 569681 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 569708 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 570110 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 570121 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 570160 1 A C scaffold7763 ScafM SNP 0008.scaffold00029 570188 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 570242 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 570410 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 570482 1 A C scaffold7763 ScafM SNP 0008.scaffold00029 570506 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 570537 1 C G scaffold7763 ScafM INDEL 0008.scaffold00029 570593 1 . C scaffold7763 ScafM SNP 0008.scaffold00029 570813 1 G C scaffold7763 ReadM SNP 0008.scaffold00029 573204 1 A G - ReadM SNP 0008.scaffold00029 573206 1 C T - ReadM SNP 0008.scaffold00029 573274 1 A C - ReadM SNP 0008.scaffold00029 573401 1 C T - Both SNP 0008.scaffold00029 573510 1 T C scaffold7763 Both INDEL 0008.scaffold00029 573542 1 A . scaffold7763 Both INDEL 0008.scaffold00029 573602 1 A . scaffold7763 Both SNP 0008.scaffold00029 573692 1 A G scaffold7763 Both SNP 0008.scaffold00029 573752 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 573898 1 T A - ReadM SNP 0008.scaffold00029 573958 1 G A - ReadM SNP 0008.scaffold00029 573972 1 A C - ReadM SNP 0008.scaffold00029 574077 1 T C - ReadM SNP 0008.scaffold00029 574325 1 A G - ReadM SNP 0008.scaffold00029 574335 1 T G - ReadM SNP 0008.scaffold00029 574387 1 A C - ReadM SNP 0008.scaffold00029 574396 1 A G - ReadM SNP 0008.scaffold00029 574427 1 T G - ReadM SNP 0008.scaffold00029 574527 1 C T - ReadM SNP 0008.scaffold00029 574543 1 T C - ReadM SNP 0008.scaffold00029 574555 1 T C - ReadM SNP 0008.scaffold00029 574580 1 C A - ReadM SNP 0008.scaffold00029 574833 1 C A - ReadM SNP 0008.scaffold00029 574844 1 G C - ReadM INDEL 0008.scaffold00029 574918 1 C . - Both SNP 0008.scaffold00029 575013 1 C A scaffold7763 Both INDEL 0008.scaffold00029 575036 1 A . scaffold7763 Both SNP 0008.scaffold00029 575066 1 A G scaffold7763 Both SNP 0008.scaffold00029 575458 1 T C scaffold7763 Both SNP 0008.scaffold00029 575496 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 575570 1 G A scaffold7763 Both SNP 0008.scaffold00029 576786 1 A T scaffold35416 Both INDEL 0008.scaffold00029 576832 1 . T scaffold35416 ScafM SNP 0008.scaffold00029 576948 1 A C scaffold35416 ScafM INDEL 0008.scaffold00029 578253 9 ......... ATGGCTGGG scaffold7763 ScafM INDEL 0008.scaffold00029 578403 21 ..................... GCCGGTGTTCGCGGTGGGCAT scaffold7763 ScafM SNP 0008.scaffold00029 578441 1 A G scaffold7763 ScafM INDEL 0008.scaffold00029 578552 2 .. AT scaffold7763 ScafM SNP 0008.scaffold00029 578579 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 579705 1 C A scaffold7763 Both SNP 0008.scaffold00029 579738 1 T G scaffold7763 Both SNP 0008.scaffold00029 579760 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 579861 1 A G scaffold7763 ScafM INDEL 0008.scaffold00029 579869 2 .T AA scaffold7763 ScafM SNP 0008.scaffold00029 579969 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 580015 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 580032 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 580108 1 C A scaffold7763 ScafM INDEL 0008.scaffold00029 581493 1 . A scaffold7763 ScafM SNP 0008.scaffold00029 581537 1 C T scaffold7763 ReadM SNP 0008.scaffold00029 581669 1 T G - ReadM INDEL 0008.scaffold00029 581818 1 C . - ReadM SNP 0008.scaffold00029 582043 1 C A - ReadM SNP 0008.scaffold00029 582443 1 A G - ReadM SNP 0008.scaffold00029 582520 1 A G - ReadM SNP 0008.scaffold00029 582562 1 G A - ReadM SNP 0008.scaffold00029 582730 1 A G - ReadM SNP 0008.scaffold00029 582746 1 G A - ReadM SNP 0008.scaffold00029 582781 1 A G - ReadM SNP 0008.scaffold00029 582923 1 G T - ReadM SNP 0008.scaffold00029 582960 1 T C - ReadM SNP 0008.scaffold00029 583005 1 T C - ReadM SNP 0008.scaffold00029 583125 1 A G - ReadM SNP 0008.scaffold00029 583185 1 A C - ReadM SNP 0008.scaffold00029 583248 1 G T - ReadM SNP 0008.scaffold00029 583457 1 T C - ReadM SNP 0008.scaffold00029 583596 1 C G - ReadM INDEL 0008.scaffold00029 583681 1 . C - ReadM SNP 0008.scaffold00029 583702 1 T C - ReadM SNP 0008.scaffold00029 584064 1 C T - ReadM SNP 0008.scaffold00029 584259 1 A T - ReadM SNP 0008.scaffold00029 584291 1 C T - ReadM SNP 0008.scaffold00029 584300 1 C A - ReadM SNP 0008.scaffold00029 584304 1 C T - Both SNP 0008.scaffold00029 584551 1 C T scaffold7763 Both SNP 0008.scaffold00029 584595 1 T C scaffold7763 Both SNP 0008.scaffold00029 584598 1 C A scaffold7763 Both SNP 0008.scaffold00029 584601 1 C T scaffold7763 Both SNP 0008.scaffold00029 584704 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 584727 1 G A - ReadM SNP 0008.scaffold00029 585253 1 G C - ReadM SNP 0008.scaffold00029 585597 1 C T - ReadM SNP 0008.scaffold00029 585614 1 G T - ReadM SNP 0008.scaffold00029 585642 1 T C - ReadM SNP 0008.scaffold00029 585703 1 G A - ReadM SNP 0008.scaffold00029 585717 1 A T - ReadM SNP 0008.scaffold00029 585727 1 T C - ScafM SNP 0008.scaffold00029 586751 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 586802 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 586838 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 586890 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 586904 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 586929 1 G T scaffold7763 Both SNP 0008.scaffold00029 587098 1 G A scaffold7763 Both INDEL 0008.scaffold00029 587153 1 T . scaffold7763 Both SNP 0008.scaffold00029 587206 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 587309 1 G A - ReadM SNP 0008.scaffold00029 587412 1 T A - ReadM SNP 0008.scaffold00029 587454 1 G T - ReadM SNP 0008.scaffold00029 587592 1 A G - ReadM SNP 0008.scaffold00029 587609 1 C T - Both SNP 0008.scaffold00029 587761 1 C G scaffold7763 Both INDEL 0008.scaffold00029 587828 1 . C scaffold7763 Both SNP 0008.scaffold00029 587835 1 G A scaffold7763 Both SNP 0008.scaffold00029 587859 1 C G scaffold7763 ReadM SNP 0008.scaffold00029 587912 1 A G - ScafM SNP 0008.scaffold00029 588201 1 T A scaffold1983 ScafM SNP 0008.scaffold00029 588231 1 T G scaffold1983 ScafM SNP 0008.scaffold00029 588250 1 C T scaffold1983 ScafM SNP 0008.scaffold00029 588254 1 T C scaffold1983 ScafM SNP 0008.scaffold00029 591295 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 591571 1 C G scaffold7763 ScafM SNP 0008.scaffold00029 591585 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 591598 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 591657 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 591662 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 591669 1 G C scaffold7763 ScafM SNP 0008.scaffold00029 591679 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 591696 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 591733 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 591770 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 591815 1 T C scaffold7763 ScafM INDEL 0008.scaffold00029 591839 2 TG .. scaffold7763 ReadM SNP 0008.scaffold00029 591945 1 G A - ScafM SNP 0008.scaffold00029 591974 1 T A scaffold7763 Both SNP 0008.scaffold00029 592036 1 A G scaffold7763 Both SNP 0008.scaffold00029 592041 1 A G scaffold7763 ScafM INDEL 0008.scaffold00029 592070 1 . G scaffold7763 Both SNP 0008.scaffold00029 592087 1 T C scaffold7763 Both SNP 0008.scaffold00029 592100 1 T C scaffold7763 Both SNP 0008.scaffold00029 592154 1 C T scaffold7763 ScafM INDEL 0008.scaffold00029 592306 1 C . scaffold7763 ScafM INDEL 0008.scaffold00029 592339 5 ..... ATGAC scaffold7763 ScafM SNP 0008.scaffold00029 592342 1 T C scaffold7763 ScafM INDEL 0008.scaffold00029 592346 1 . A scaffold7763 ScafM SNP 0008.scaffold00029 592495 2 AT TA scaffold7763 Both SNP 0008.scaffold00029 592612 1 T A scaffold7763 ScafM SNP 0008.scaffold00029 592856 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 592880 1 T G scaffold7763 ScafM SNP 0008.scaffold00029 592882 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 592915 1 A T scaffold7763 ScafM INDEL 0008.scaffold00029 592947 1 T . scaffold7763 ScafM SNP 0008.scaffold00029 592963 1 G T scaffold7763 ReadM INDEL 0008.scaffold00029 593161 1 . G - ScafM INDEL 0008.scaffold00029 593161 2 .A GT scaffold7763 Both SNP 0008.scaffold00029 593194 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 593301 1 A G scaffold7763 Both SNP 0008.scaffold00029 593972 1 C T scaffold7763 Both SNP 0008.scaffold00029 594461 1 G A scaffold7763 Both SNP 0008.scaffold00029 594738 1 T C scaffold7763 Both SNP 0008.scaffold00029 594906 1 T C scaffold7763 Both SNP 0008.scaffold00029 595175 1 G A scaffold7763 Both SNP 0008.scaffold00029 596061 1 A T scaffold7763 Both SNP 0008.scaffold00029 596105 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 596857 1 G C scaffold7763 Both SNP 0008.scaffold00029 597229 1 T G scaffold7763 ScafM SNP 0008.scaffold00029 597325 1 C T scaffold7763 Both SNP 0008.scaffold00029 597471 1 A C scaffold7763 Both SNP 0008.scaffold00029 598004 1 C A scaffold7763 Both SNP 0008.scaffold00029 598071 1 T C scaffold7763 Both SNP 0008.scaffold00029 598268 1 C T scaffold7763 Both SNP 0008.scaffold00029 598440 1 G A scaffold7763 Both SNP 0008.scaffold00029 599183 1 C A scaffold7763 Both SNP 0008.scaffold00029 599866 1 T C scaffold7763 ReadM SNP 0008.scaffold00029 600865 1 C T - ReadM SNP 0008.scaffold00029 601719 1 A T - ScafM SNP 0008.scaffold00029 603560 1 T C scaffold7763 ReadM SNP 0008.scaffold00029 604074 1 A T - ReadM SNP 0008.scaffold00029 604154 1 G A - Both SNP 0008.scaffold00029 604581 1 C T scaffold7763 Both SNP 0008.scaffold00029 605031 1 T A scaffold7763 ScafM INDEL 0008.scaffold00029 605197 21 ..................... AAAACTTAAGTTGGTAGCAAT scaffold7763 ScafM INDEL 0008.scaffold00029 605594 2 AA .. scaffold7763 ScafM INDEL 0008.scaffold00029 606346 1 . T scaffold7763 ReadM SNP 0008.scaffold00029 606439 1 T A - ScafM SNP 0008.scaffold00029 606491 1 A T scaffold7763 ReadM INDEL 0008.scaffold00029 606560 1 A . - ReadM SNP 0008.scaffold00029 607231 1 T G - ReadM SNP 0008.scaffold00029 607295 1 T G - ReadM SNP 0008.scaffold00029 607454 1 A G - ReadM SNP 0008.scaffold00029 607566 1 A T - ReadM SNP 0008.scaffold00029 607718 1 C T - ReadM SNP 0008.scaffold00029 607895 1 C T - ReadM SNP 0008.scaffold00029 607946 1 G A - ReadM SNP 0008.scaffold00029 608284 1 C A - ReadM SNP 0008.scaffold00029 608287 1 T C - ReadM SNP 0008.scaffold00029 608482 1 A G - ReadM SNP 0008.scaffold00029 608632 1 T C - ScafM SNP 0008.scaffold00029 608719 1 G T scaffold7763 Both SNP 0008.scaffold00029 608962 1 C T scaffold7763 Both SNP 0008.scaffold00029 608986 1 C G scaffold7763 ReadM SNP 0008.scaffold00029 609029 1 G A - ReadM SNP 0008.scaffold00029 610736 2 AA GG - ReadM SNP 0008.scaffold00029 610952 1 C T - ReadM INDEL 0008.scaffold00029 611109 1 . G - Both SNP 0008.scaffold00029 611604 1 T C scaffold7763 Both SNP 0008.scaffold00029 611746 1 A G scaffold7763 Both SNP 0008.scaffold00029 611797 1 G T scaffold7763 Both SNP 0008.scaffold00029 611831 1 G A scaffold7763 Both SNP 0008.scaffold00029 611891 1 T C scaffold7763 Both INDEL 0008.scaffold00029 612097 1 G . scaffold7763 ReadM SNP 0008.scaffold00029 612156 1 T C - ReadM SNP 0008.scaffold00029 612902 1 C T - Both SNP 0008.scaffold00029 614384 1 A T scaffold7763 ReadM SNP 0008.scaffold00029 614737 1 T C - ReadM SNP 0008.scaffold00029 614776 1 T C - ReadM SNP 0008.scaffold00029 614860 1 G C - ReadM SNP 0008.scaffold00029 614863 1 T C - ReadM SNP 0008.scaffold00029 614934 1 C T - Both SNP 0008.scaffold00029 615177 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 615200 2 GA TT scaffold7763 Both SNP 0008.scaffold00029 615387 1 G T scaffold7763 ReadM SNP 0008.scaffold00029 616302 1 C T - ReadM SNP 0008.scaffold00029 616645 1 C T - ReadM INDEL 0008.scaffold00029 617105 1 G . - ReadM SNP 0008.scaffold00029 617417 1 C T - ReadM SNP 0008.scaffold00029 617710 1 T A - ReadM SNP 0008.scaffold00029 618106 1 A T - ReadM SNP 0008.scaffold00029 618198 1 T C - ReadM SNP 0008.scaffold00029 618899 1 G A - ReadM SNP 0008.scaffold00029 618906 1 G A - ReadM SNP 0008.scaffold00029 619539 1 T C - Both SNP 0008.scaffold00029 619912 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 620388 1 T A - Both SNP 0008.scaffold00029 620724 1 C T scaffold7763 Both SNP 0008.scaffold00029 621088 1 G A scaffold7763 Both SNP 0008.scaffold00029 621296 1 A G scaffold7763 Both SNP 0008.scaffold00029 621373 1 T C scaffold7763 Both SNP 0008.scaffold00029 621481 1 T C scaffold7763 Both SNP 0008.scaffold00029 623026 1 G T scaffold7763 Both INDEL 0008.scaffold00029 623153 1 T . scaffold7763 Both SNP 0008.scaffold00029 623385 1 C T scaffold7763 Both SNP 0008.scaffold00029 623424 1 G A scaffold7763 ReadM INDEL 0008.scaffold00029 623559 1 . C - ReadM SNP 0008.scaffold00029 623711 1 T A - ReadM SNP 0008.scaffold00029 623764 1 C T - ScafM SNP 0008.scaffold00029 623915 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 623933 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 623951 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 623953 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 623959 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 623965 1 A G scaffold7763 ScafM INDEL 0008.scaffold00029 623974 19 ................... CATAAGTGTTATATGCAAT scaffold7763 ScafM INDEL 0008.scaffold00029 623982 1 . G scaffold7763 ScafM INDEL 0008.scaffold00029 623995 2 AA .. scaffold7763 ScafM SNP 0008.scaffold00029 624003 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 624039 1 C T scaffold7763 ScafM INDEL 0008.scaffold00029 624081 1 . A scaffold7763 ScafM INDEL 0008.scaffold00029 624135 2 .. TA scaffold7763 ScafM SNP 0008.scaffold00029 624196 1 G A scaffold7763 ScafM INDEL 0008.scaffold00029 625941 1 A . scaffold7763 ScafM SNP 0008.scaffold00029 625986 1 G A scaffold7763 ScafM INDEL 0008.scaffold00029 626032 6 GATGTT ...... scaffold7763 ScafM SNP 0008.scaffold00029 626174 1 G T scaffold7763 ScafM SNP 0008.scaffold00029 626284 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 626328 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 626454 1 G A scaffold7763 Both INDEL 0008.scaffold00029 626626 1 . T scaffold7763 ReadM SNP 0008.scaffold00029 626772 1 T C - ReadM SNP 0008.scaffold00029 626965 1 T C - ReadM SNP 0008.scaffold00029 627032 1 T C - ReadM SNP 0008.scaffold00029 627037 1 A T - ScafM SNP 0008.scaffold00029 627226 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 627237 1 C T scaffold7763 Both SNP 0008.scaffold00029 627640 1 T C scaffold7763 Both SNP 0008.scaffold00029 627651 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 627771 1 T A - ReadM SNP 0008.scaffold00029 627789 1 T C - ReadM SNP 0008.scaffold00029 627817 1 C T - Both SNP 0008.scaffold00029 627969 1 A G scaffold7763 Both SNP 0008.scaffold00029 628031 1 T C scaffold7763 ScafM INDEL 0008.scaffold00029 628145 3 TAA ... scaffold7763 ReadM SNP 0008.scaffold00029 628457 1 T G - ReadM SNP 0008.scaffold00029 628735 1 A T - Both SNP 0008.scaffold00029 628965 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 631507 1 A G - ReadM SNP 0008.scaffold00029 631553 1 G T - ReadM SNP 0008.scaffold00029 631583 1 A G - Both SNP 0008.scaffold00029 631905 1 G A scaffold7763 ReadM SNP 0008.scaffold00029 632031 1 G A - ReadM SNP 0008.scaffold00029 632153 1 T G - ReadM SNP 0008.scaffold00029 632192 1 C G - ReadM SNP 0008.scaffold00029 632465 1 G A - ReadM SNP 0008.scaffold00029 632616 1 C T - ReadM SNP 0008.scaffold00029 632658 1 G T - ReadM SNP 0008.scaffold00029 632742 1 T C - ReadM SNP 0008.scaffold00029 632759 1 G C - ReadM SNP 0008.scaffold00029 634253 1 T C - Both SNP 0008.scaffold00029 634280 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 634347 1 T A scaffold7763 Both SNP 0008.scaffold00029 634472 1 G A scaffold7763 Both SNP 0008.scaffold00029 634525 1 G A scaffold7763 Both INDEL 0008.scaffold00029 634550 1 . T scaffold7763 Both SNP 0008.scaffold00029 635131 1 A T scaffold7763 Both INDEL 0008.scaffold00029 635393 1 T . scaffold7763 ScafM INDEL 0008.scaffold00029 635721 1 T . scaffold7763 ScafM INDEL 0008.scaffold00029 635755 3 ... TCT scaffold7763 Both SNP 0008.scaffold00029 635826 1 A C scaffold7763 Both SNP 0008.scaffold00029 635927 1 T A scaffold7763 ScafM SNP 0008.scaffold00029 636156 1 G T scaffold7763 ScafM INDEL 0008.scaffold00029 637499 4 ATAT .... scaffold7763 ScafM INDEL 0008.scaffold00029 637504 1 A . scaffold7763 Both SNP 0008.scaffold00029 637571 1 C T scaffold7763 ScafM INDEL 0008.scaffold00029 638065 16 CCCCTGAAAACCCCTC ................ scaffold7763 Both SNP 0008.scaffold00029 638249 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 638356 1 T G scaffold7763 Both INDEL 0008.scaffold00029 638516 1 T . scaffold7763 Both SNP 0008.scaffold00029 639240 1 T G scaffold7763 Both SNP 0008.scaffold00029 639496 1 G A scaffold7763 Both SNP 0008.scaffold00029 640126 1 A T scaffold7763 ReadM SNP 0008.scaffold00029 640241 1 A G - Both INDEL 0008.scaffold00029 640560 1 . A scaffold7763 Both SNP 0008.scaffold00029 641182 1 G C scaffold7763 Both SNP 0008.scaffold00029 642555 1 T A scaffold7763 Both SNP 0008.scaffold00029 642559 1 A C scaffold7763 Both SNP 0008.scaffold00029 642863 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 643016 1 C G scaffold7763 ScafM INDEL 0008.scaffold00029 643029 7 ....... TTCTAAG scaffold7763 ScafM SNP 0008.scaffold00029 643040 1 C G scaffold7763 ScafM SNP 0008.scaffold00029 643043 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 643047 1 A C scaffold7763 ScafM SNP 0008.scaffold00029 643057 2 GT TA scaffold7763 ScafM INDEL 0008.scaffold00029 643066 1 . T scaffold7763 ScafM SNP 0008.scaffold00029 643428 2 AC TT scaffold7763 ScafM SNP 0008.scaffold00029 643435 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 643461 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 643471 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 643481 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 643485 1 C G scaffold7763 ScafM INDEL 0008.scaffold00029 643498 20 .................... AAATTTAGTTTGCAACAATG scaffold7763 ScafM INDEL 0008.scaffold00029 643501 2 .. AA scaffold7763 ScafM SNP 0008.scaffold00029 643525 2 AT GG scaffold7763 ScafM SNP 0008.scaffold00029 643532 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 643558 1 C G scaffold7763 ScafM INDEL 0008.scaffold00029 643584 4 AGTT .... scaffold7763 ScafM INDEL 0008.scaffold00029 643590 4 ACAT ...G scaffold7763 ScafM SNP 0008.scaffold00029 643613 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 643616 1 G T scaffold7763 ScafM INDEL 0008.scaffold00029 643629 7 TCATTAA ....... scaffold7763 ScafM SNP 0008.scaffold00029 643664 1 G T scaffold7763 ScafM SNP 0008.scaffold00029 643666 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 643683 1 A C scaffold7763 ScafM SNP 0008.scaffold00029 643708 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 643714 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 643719 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 643721 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 643739 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 643783 1 T G scaffold7763 ScafM SNP 0008.scaffold00029 643827 1 G C scaffold7763 ScafM SNP 0008.scaffold00029 643829 1 A G scaffold7763 ScafM INDEL 0008.scaffold00029 643837 1 C . scaffold7763 ScafM INDEL 0008.scaffold00029 643849 4 ATTT .... scaffold7763 ScafM INDEL 0008.scaffold00029 643854 2 CA .. scaffold7763 ScafM SNP 0008.scaffold00029 643869 1 T A scaffold7763 ScafM SNP 0008.scaffold00029 644445 1 T G scaffold7763 ScafM SNP 0008.scaffold00029 644506 1 C G scaffold7763 ScafM SNP 0008.scaffold00029 644861 1 A T scaffold7763 ScafM SNP 0008.scaffold00029 644863 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 644871 1 C A scaffold7763 ScafM SNP 0008.scaffold00029 644874 1 C T scaffold7763 ScafM INDEL 0008.scaffold00029 644938 1 . G scaffold7763 ScafM INDEL 0008.scaffold00029 645367 1 T . scaffold7763 ScafM SNP 0008.scaffold00029 645380 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 645385 1 T C scaffold7763 ScafM INDEL 0008.scaffold00029 645393 1 . T scaffold7763 ScafM SNP 0008.scaffold00029 645440 1 G C scaffold7763 ScafM SNP 0008.scaffold00029 645444 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 645446 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 645452 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 645479 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 645520 1 G T scaffold7763 ScafM SNP 0008.scaffold00029 645525 1 G A scaffold7763 ScafM INDEL 0008.scaffold00029 645531 7 CGGAAGG ....... scaffold7763 Both INDEL 0008.scaffold00029 645830 3 AAC ... scaffold7763 Both SNP 0008.scaffold00029 646252 1 T A scaffold7763 Both SNP 0008.scaffold00029 646318 1 T G scaffold7763 Both SNP 0008.scaffold00029 646363 1 T C scaffold7763 Both SNP 0008.scaffold00029 646390 1 C T scaffold7763 Both SNP 0008.scaffold00029 646420 1 A G scaffold7763 Both SNP 0008.scaffold00029 646456 1 G A scaffold7763 Both SNP 0008.scaffold00029 646574 1 T G scaffold7763 Both SNP 0008.scaffold00029 646635 1 T C scaffold7763 Both SNP 0008.scaffold00029 646657 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 646714 1 C T scaffold7763 ScafM SNP 0008.scaffold00029 646819 1 T C scaffold7763 ScafM SNP 0008.scaffold00029 646843 1 A C scaffold7763 Both SNP 0008.scaffold00029 646930 1 A G scaffold7763 ScafM SNP 0008.scaffold00029 646998 1 G T scaffold7763 Both SNP 0008.scaffold00029 647065 1 T A scaffold7763 ScafM SNP 0008.scaffold00029 647155 1 G A scaffold7763 ScafM SNP 0008.scaffold00029 647261 1 C T scaffold7763 Both SNP 0008.scaffold00029 648586 1 A G scaffold27966 Both SNP 0008.scaffold00029 648739 1 G T scaffold27966 Both SNP 0008.scaffold00029 648840 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 649079 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 649114 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 649379 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 649478 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 650709 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 650772 1 G C scaffold2478 ScafM SNP 0008.scaffold00029 650787 1 G C scaffold2478 ScafM SNP 0008.scaffold00029 650807 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 650848 1 T G scaffold2478 ScafM SNP 0008.scaffold00029 650853 1 G C scaffold2478 ScafM SNP 0008.scaffold00029 650875 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 650942 1 T G scaffold2478 ScafM SNP 0008.scaffold00029 650950 1 G C scaffold2478 ScafM SNP 0008.scaffold00029 650964 1 A G scaffold2478 ScafM SNP 0008.scaffold00029 651001 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 651038 1 A T scaffold2478 ScafM SNP 0008.scaffold00029 651074 1 A G scaffold2478 ScafM SNP 0008.scaffold00029 651152 1 A G scaffold2478 ScafM SNP 0008.scaffold00029 651187 1 C G scaffold2478 ScafM INDEL 0008.scaffold00029 651195 1 G . scaffold2478 ReadM SNP 0008.scaffold00029 651215 1 G C - ReadM SNP 0008.scaffold00029 651221 1 G A - ScafM SNP 0008.scaffold00029 651311 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 651322 1 C T scaffold2478 ReadM SNP 0008.scaffold00029 651377 1 G A - ScafM SNP 0008.scaffold00029 651384 1 G A scaffold2478 ScafM SNP 0008.scaffold00029 651419 1 A T scaffold2478 ScafM SNP 0008.scaffold00029 651443 1 A T scaffold2478 ScafM SNP 0008.scaffold00029 651518 1 A G scaffold2478 Both SNP 0008.scaffold00029 651647 1 T G scaffold27966 Both SNP 0008.scaffold00029 651710 1 A G scaffold27966 Both SNP 0008.scaffold00029 651764 1 A G scaffold27966 Both SNP 0008.scaffold00029 651783 1 T C scaffold27966 Both SNP 0008.scaffold00029 651798 1 G A scaffold27966 Both SNP 0008.scaffold00029 651832 1 A G scaffold27966 Both SNP 0008.scaffold00029 651921 1 C G scaffold27966 Both SNP 0008.scaffold00029 652052 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 652169 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 652195 1 A . scaffold27966 Both SNP 0008.scaffold00029 652215 1 T A scaffold27966 Both SNP 0008.scaffold00029 652241 1 C T scaffold27966 Both SNP 0008.scaffold00029 652365 1 T C scaffold27966 Both SNP 0008.scaffold00029 652367 1 T G scaffold27966 ReadM SNP 0008.scaffold00029 652472 1 G T - ReadM SNP 0008.scaffold00029 652636 1 A T - ReadM SNP 0008.scaffold00029 652726 1 G A - ReadM INDEL 0008.scaffold00029 652765 1 A . - ReadM SNP 0008.scaffold00029 652911 1 A T - ReadM SNP 0008.scaffold00029 653226 1 G A - ScafM INDEL 0008.scaffold00029 654270 1 . A scaffold27966 ScafM SNP 0008.scaffold00029 654339 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 654386 1 T G scaffold27966 Both SNP 0008.scaffold00029 654719 1 C A scaffold27966 Both SNP 0008.scaffold00029 655339 1 C T scaffold27966 Both SNP 0008.scaffold00029 655809 1 G C scaffold27966 Both SNP 0008.scaffold00029 655831 1 T C scaffold27966 ReadM SNP 0008.scaffold00029 655886 1 A G - Both SNP 0008.scaffold00029 655969 1 T A scaffold27966 Both SNP 0008.scaffold00029 655974 1 A C scaffold27966 Both SNP 0008.scaffold00029 656103 1 G T scaffold27966 Both INDEL 0008.scaffold00029 656178 1 . A scaffold27966 ReadM SNP 0008.scaffold00029 656370 1 G A - ReadM SNP 0008.scaffold00029 656372 1 G A - ReadM SNP 0008.scaffold00029 656577 1 G A - ReadM SNP 0008.scaffold00029 656672 1 T C - ReadM SNP 0008.scaffold00029 656707 1 C A - ReadM SNP 0008.scaffold00029 656827 1 G C - ScafM SNP 0008.scaffold00029 657044 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 657046 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 657048 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 657052 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 657090 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 657092 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 657095 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 657097 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 657110 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 657133 1 C A scaffold27966 ScafM SNP 0008.scaffold00029 657143 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 657173 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 657177 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 657194 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 657198 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 657204 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 657220 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 657240 1 G A scaffold27966 ScafM INDEL 0008.scaffold00029 657258 1 A . scaffold27966 ScafM SNP 0008.scaffold00029 657268 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 657299 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 657306 1 T C scaffold27966 Both SNP 0008.scaffold00029 657359 1 G A scaffold27966 Both SNP 0008.scaffold00029 657394 1 G A scaffold27966 Both SNP 0008.scaffold00029 657415 1 G C scaffold27966 Both SNP 0008.scaffold00029 657427 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 657477 1 . A scaffold27966 ScafM SNP 0008.scaffold00029 657495 1 G C scaffold27966 Both SNP 0008.scaffold00029 657518 1 A G scaffold27966 Both SNP 0008.scaffold00029 657533 1 T C scaffold27966 Both SNP 0008.scaffold00029 657587 1 A T scaffold27966 Both INDEL 0008.scaffold00029 657841 1 . A scaffold27966 Both SNP 0008.scaffold00029 657980 1 C T scaffold27966 Both SNP 0008.scaffold00029 658076 1 T G scaffold27966 Both SNP 0008.scaffold00029 658164 1 A C scaffold27966 Both SNP 0008.scaffold00029 658263 1 G A scaffold27966 Both SNP 0008.scaffold00029 658292 1 C A scaffold27966 Both SNP 0008.scaffold00029 658318 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 658378 1 C G scaffold27966 ScafM INDEL 0008.scaffold00029 658413 3 ... AAA scaffold27966 ScafM SNP 0008.scaffold00029 658454 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 658457 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 658481 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 658484 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 658511 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 658692 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 658698 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 658703 1 A . scaffold27966 ScafM SNP 0008.scaffold00029 658711 1 C A scaffold27966 ScafM SNP 0008.scaffold00029 658720 1 T A scaffold27966 ScafM INDEL 0008.scaffold00029 658722 4 TGTG .... scaffold27966 ScafM SNP 0008.scaffold00029 658731 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 658895 1 G A scaffold27966 ScafM INDEL 0008.scaffold00029 658896 4 .... TACG scaffold27966 ScafM INDEL 0008.scaffold00029 658897 2 .. GT scaffold27966 ScafM SNP 0008.scaffold00029 658914 2 AA TG scaffold27966 ScafM SNP 0008.scaffold00029 658930 1 A T scaffold27966 ScafM INDEL 0008.scaffold00029 658935 2 GC .A scaffold27966 ScafM SNP 0008.scaffold00029 658938 1 C A scaffold27966 ScafM SNP 0008.scaffold00029 658947 1 C A scaffold27966 ScafM SNP 0008.scaffold00029 659031 1 G T scaffold27966 ScafM SNP 0008.scaffold00029 659044 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 659059 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659072 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 659080 1 C A scaffold27966 ScafM INDEL 0008.scaffold00029 659085 2 AA .. scaffold27966 ScafM SNP 0008.scaffold00029 659089 1 A G scaffold27966 ScafM INDEL 0008.scaffold00029 659098 18 .................. CGATTACCAACAAATCGT scaffold27966 ScafM SNP 0008.scaffold00029 659126 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 659135 1 T C scaffold27966 ScafM INDEL 0008.scaffold00029 659140 2 CA .. scaffold27966 ScafM SNP 0008.scaffold00029 659145 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 659149 1 T C scaffold27966 ScafM INDEL 0008.scaffold00029 659150 1 . T scaffold27966 ScafM SNP 0008.scaffold00029 659168 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 659171 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659174 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 659176 2 AG CA scaffold27966 ScafM SNP 0008.scaffold00029 659181 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659184 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659195 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 659203 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 659215 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 659230 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659235 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 659240 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 659242 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 659252 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 659255 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 659497 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 659499 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 659513 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 659521 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 659525 1 A T scaffold27966 ScafM INDEL 0008.scaffold00029 659552 1 . G scaffold27966 ScafM SNP 0008.scaffold00029 659559 1 C G scaffold27966 ScafM INDEL 0008.scaffold00029 659560 1 . G scaffold27966 ScafM SNP 0008.scaffold00029 659568 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 659588 2 CC TT scaffold27966 ScafM SNP 0008.scaffold00029 659626 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 659644 1 A T scaffold27966 ScafM INDEL 0008.scaffold00029 659663 1 . T scaffold27966 ScafM INDEL 0008.scaffold00029 659670 1 G . scaffold27966 ScafM SNP 0008.scaffold00029 660750 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 660752 2 AG GA scaffold27966 ScafM SNP 0008.scaffold00029 660765 1 A G scaffold27966 ScafM INDEL 0008.scaffold00029 660782 1 . A scaffold27966 ScafM SNP 0008.scaffold00029 660784 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 660798 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 660807 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 660811 1 T G scaffold27966 ScafM SNP 0008.scaffold00029 660829 4 CATC TTGT scaffold27966 ScafM SNP 0008.scaffold00029 660848 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 660854 3 CAT TCC scaffold27966 ScafM SNP 0008.scaffold00029 660859 1 G C scaffold27966 ScafM SNP 0008.scaffold00029 660868 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 660875 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 660905 1 G T scaffold27966 ScafM INDEL 0008.scaffold00029 660925 1 A . scaffold27966 ScafM SNP 0008.scaffold00029 660931 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 660961 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 660977 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 660986 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 660995 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 661015 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661032 1 A G scaffold27966 ScafM INDEL 0008.scaffold00029 661035 4 CCCC ...T scaffold27966 ScafM SNP 0008.scaffold00029 661042 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 661068 2 .. TA scaffold27966 ScafM SNP 0008.scaffold00029 661072 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661078 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661093 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 661111 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 661139 1 A . scaffold27966 ScafM INDEL 0008.scaffold00029 661141 5 ATAAA ..... scaffold27966 ScafM SNP 0008.scaffold00029 661156 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 661163 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 661175 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 661195 1 A . scaffold27966 ScafM SNP 0008.scaffold00029 661240 1 G T scaffold27966 ScafM SNP 0008.scaffold00029 661254 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 661270 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661273 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661321 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661331 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661357 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661366 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 661391 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 661393 1 G T scaffold27966 ScafM SNP 0008.scaffold00029 661396 2 CT TC scaffold27966 ScafM SNP 0008.scaffold00029 661626 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 661647 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 661888 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 661891 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661894 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 661900 2 GC AT scaffold27966 ScafM SNP 0008.scaffold00029 661905 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661947 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661968 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 661974 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 662037 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662044 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662047 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 662050 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 662452 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 662471 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 662473 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 662496 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662504 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 662513 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662521 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662539 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662562 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662595 1 T A scaffold27966 ScafM SNP 0008.scaffold00029 662600 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662602 1 G C scaffold27966 ScafM SNP 0008.scaffold00029 662620 1 A C scaffold27966 ScafM SNP 0008.scaffold00029 662633 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 662667 1 T G scaffold27966 ScafM INDEL 0008.scaffold00029 662669 2 TC .. scaffold27966 ScafM INDEL 0008.scaffold00029 662681 1 . G scaffold27966 ScafM INDEL 0008.scaffold00029 662689 1 . G scaffold27966 ScafM SNP 0008.scaffold00029 662703 2 GT AC scaffold27966 ScafM SNP 0008.scaffold00029 662706 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662767 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 662775 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 662780 1 G T scaffold27966 ScafM SNP 0008.scaffold00029 662783 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 662794 1 C G scaffold27966 ScafM SNP 0008.scaffold00029 662796 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662798 1 A T scaffold27966 ScafM SNP 0008.scaffold00029 662804 1 C A scaffold27966 ScafM SNP 0008.scaffold00029 662829 1 A C scaffold27966 ScafM INDEL 0008.scaffold00029 662852 3 AAA ... scaffold27966 ScafM SNP 0008.scaffold00029 662860 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662877 1 T A scaffold27966 ScafM INDEL 0008.scaffold00029 662880 2 CG .T scaffold27966 ScafM SNP 0008.scaffold00029 662902 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 662919 1 G A scaffold27966 ReadM SNP 0008.scaffold00029 663810 1 T C - ScafM SNP 0008.scaffold00029 664433 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 664439 1 T C scaffold27966 ScafM INDEL 0008.scaffold00029 664489 1 . G scaffold27966 ScafM SNP 0008.scaffold00029 664530 1 C T scaffold27966 ScafM INDEL 0008.scaffold00029 665743 2 .. GA scaffold27966 ScafM SNP 0008.scaffold00029 665762 1 G T scaffold27966 ScafM SNP 0008.scaffold00029 665765 1 T C scaffold27966 ScafM SNP 0008.scaffold00029 665784 1 A G scaffold27966 ScafM INDEL 0008.scaffold00029 666165 6 ...... ACTCAT scaffold27966 ScafM INDEL 0008.scaffold00029 666375 1 T . scaffold27966 ScafM SNP 0008.scaffold00029 666404 1 T G scaffold27966 ScafM INDEL 0008.scaffold00029 666426 1 . T scaffold27966 ReadM INDEL 0008.scaffold00029 666736 3 ATA ... - Both INDEL 0008.scaffold00029 667142 1 . A scaffold27966 ScafM SNP 0008.scaffold00029 667494 1 A G scaffold27966 ScafM SNP 0008.scaffold00029 667514 1 G C scaffold27966 ReadM SNP 0008.scaffold00029 667656 1 C T - ReadM SNP 0008.scaffold00029 667667 1 G A - ReadM SNP 0008.scaffold00029 667757 1 G A - ReadM INDEL 0008.scaffold00029 668100 1 . G - ReadM SNP 0008.scaffold00029 668134 1 T C - ReadM SNP 0008.scaffold00029 668320 1 A T - ReadM SNP 0008.scaffold00029 668616 1 C T - ReadM SNP 0008.scaffold00029 668664 1 G A - ReadM SNP 0008.scaffold00029 668840 1 G A - ReadM SNP 0008.scaffold00029 668855 1 G A - ReadM INDEL 0008.scaffold00029 668913 1 A . - ReadM SNP 0008.scaffold00029 668951 1 G C - ReadM SNP 0008.scaffold00029 669099 1 A G - ReadM SNP 0008.scaffold00029 669398 1 C T - ReadM SNP 0008.scaffold00029 669418 1 A G - ReadM SNP 0008.scaffold00029 669469 1 G T - ReadM SNP 0008.scaffold00029 669830 1 T C - ReadM INDEL 0008.scaffold00029 670233 1 . C - Both SNP 0008.scaffold00029 670384 1 C G scaffold27966 Both SNP 0008.scaffold00029 670432 1 C T scaffold27966 ScafM SNP 0008.scaffold00029 670460 1 G A scaffold27966 ScafM SNP 0008.scaffold00029 670486 1 A G scaffold27966 ReadM SNP 0008.scaffold00029 671079 1 A C - ReadM SNP 0008.scaffold00029 671490 1 C A - ReadM SNP 0008.scaffold00029 671593 1 T C - ReadM SNP 0008.scaffold00029 671611 1 G C - ReadM SNP 0008.scaffold00029 671969 1 T C - ReadM SNP 0008.scaffold00029 671996 1 C T - ReadM SNP 0008.scaffold00029 672087 1 T G - ReadM SNP 0008.scaffold00029 672177 1 A G - ReadM SNP 0008.scaffold00029 672200 1 G C - ReadM SNP 0008.scaffold00029 672317 1 T A - ReadM SNP 0008.scaffold00029 672366 1 A G - ReadM SNP 0008.scaffold00029 672520 1 G A - ReadM SNP 0008.scaffold00029 672592 1 G T - ReadM SNP 0008.scaffold00029 673066 1 T C - ReadM SNP 0008.scaffold00029 673068 1 G A - ReadM SNP 0008.scaffold00029 673236 1 G T - ReadM SNP 0008.scaffold00029 673256 1 T C - ReadM SNP 0008.scaffold00029 673316 1 T G - ReadM SNP 0008.scaffold00029 673336 1 G A - ReadM SNP 0008.scaffold00029 673395 1 G T - ReadM SNP 0008.scaffold00029 673582 1 T C - ReadM SNP 0008.scaffold00029 673605 1 A C - ReadM SNP 0008.scaffold00029 673706 1 C T - ReadM SNP 0008.scaffold00029 673834 1 A C - ReadM SNP 0008.scaffold00029 674066 1 G A - ReadM SNP 0008.scaffold00029 674187 1 T C - ReadM SNP 0008.scaffold00029 674224 1 T C - ReadM SNP 0008.scaffold00029 674243 1 C T - ReadM SNP 0008.scaffold00029 674307 1 G A - ReadM SNP 0008.scaffold00029 674344 1 T C - Both SNP 0008.scaffold00029 674821 1 A G scaffold16865 ReadM SNP 0008.scaffold00029 674971 1 A G - ReadM SNP 0008.scaffold00029 675143 1 C T - ReadM SNP 0008.scaffold00029 675202 1 A G - ReadM SNP 0008.scaffold00029 675315 1 C T - ReadM SNP 0008.scaffold00029 675337 1 T G - ReadM SNP 0008.scaffold00029 675470 1 T C - Both SNP 0008.scaffold00029 675673 1 T C scaffold16865 Both SNP 0008.scaffold00029 675680 1 C G scaffold16865 Both SNP 0008.scaffold00029 675816 1 C T scaffold16865 Both SNP 0008.scaffold00029 675922 1 G T scaffold16865 ScafM INDEL 0008.scaffold00029 675984 1 . T scaffold16865 Both SNP 0008.scaffold00029 676132 1 T C scaffold16865 Both SNP 0008.scaffold00029 676210 1 A G scaffold16865 Both SNP 0008.scaffold00029 676392 1 T C scaffold16865 Both SNP 0008.scaffold00029 676552 1 G A scaffold16865 ScafM INDEL 0008.scaffold00029 676613 5 TGGCC ..... scaffold16865 ScafM SNP 0008.scaffold00029 676648 1 C T scaffold16865 Both SNP 0008.scaffold00029 676718 1 A G scaffold16865 ReadM INDEL 0008.scaffold00029 676743 1 T . - ReadM SNP 0008.scaffold00029 676784 1 C T - ReadM SNP 0008.scaffold00029 676862 1 G A - ReadM SNP 0008.scaffold00029 676883 1 C A - ReadM SNP 0008.scaffold00029 676901 1 A G - ReadM INDEL 0008.scaffold00029 677042 1 C . - ReadM SNP 0008.scaffold00029 677141 1 T C - ReadM SNP 0008.scaffold00029 682727 1 T C - ScafM SNP 0008.scaffold00029 682814 1 A C scaffold16865 ScafM SNP 0008.scaffold00029 682861 1 C T scaffold16865 ScafM INDEL 0008.scaffold00029 682984 3 GAG ... scaffold16865 ScafM SNP 0008.scaffold00029 683042 1 C T scaffold16865 ScafM SNP 0008.scaffold00029 683063 1 G A scaffold16865 ScafM INDEL 0008.scaffold00029 683094 2 .. AA scaffold16865 ScafM INDEL 0008.scaffold00029 683108 1 A . scaffold16865 ScafM SNP 0008.scaffold00029 683260 1 T C scaffold16865 ScafM SNP 0008.scaffold00029 683263 1 A T scaffold16865 ScafM SNP 0008.scaffold00029 683299 1 G C scaffold16865 ScafM SNP 0008.scaffold00029 683302 1 T C scaffold16865 ScafM SNP 0008.scaffold00029 683325 1 G A scaffold16865 ScafM SNP 0008.scaffold00029 683355 1 T A scaffold16865 ScafM SNP 0008.scaffold00029 683403 1 T G scaffold16865 ScafM SNP 0008.scaffold00029 683442 1 A G scaffold16865 ScafM INDEL 0008.scaffold00029 683460 1 G . scaffold16865 ScafM SNP 0008.scaffold00029 683515 1 C T scaffold16865 ScafM SNP 0008.scaffold00029 683517 1 A T scaffold16865 ScafM INDEL 0008.scaffold00029 683550 7 TCTTGGG ....... scaffold16865 ScafM INDEL 0008.scaffold00029 683575 1 C . scaffold16865 ScafM INDEL 0008.scaffold00029 683604 8 TGAGTGTG ........ scaffold16865 ScafM SNP 0008.scaffold00029 683630 1 C A scaffold16865 Both SNP 0008.scaffold00029 683682 1 A C scaffold16865 Both SNP 0008.scaffold00029 683702 1 G C scaffold16865 Both SNP 0008.scaffold00029 683776 1 T C scaffold16865 ScafM SNP 0008.scaffold00029 683797 1 T C scaffold16865 Both INDEL 0008.scaffold00029 683870 1 . T scaffold16865 ReadM SNP 0008.scaffold00029 684053 1 A T - ReadM SNP 0008.scaffold00029 684135 1 G A - ReadM SNP 0008.scaffold00029 684352 1 G A - ReadM INDEL 0008.scaffold00029 684406 1 G . - ReadM SNP 0008.scaffold00029 684696 1 G A - ReadM SNP 0008.scaffold00029 684746 1 G A - Both SNP 0008.scaffold00029 684916 1 T C scaffold16865 ReadM SNP 0008.scaffold00029 685025 1 T C - Both SNP 0008.scaffold00029 685080 1 T C scaffold16865 Both INDEL 0008.scaffold00029 685132 1 . A scaffold16865 Both SNP 0008.scaffold00029 685221 1 G T scaffold16865 Both SNP 0008.scaffold00029 685230 1 T A scaffold16865 ReadM SNP 0008.scaffold00029 685261 1 T A - ReadM SNP 0008.scaffold00029 685306 1 G C - ReadM SNP 0008.scaffold00029 685391 1 T A - ReadM SNP 0008.scaffold00029 685607 1 C A - ReadM SNP 0008.scaffold00029 685640 1 G A - ReadM SNP 0008.scaffold00029 685678 1 A G - ReadM SNP 0008.scaffold00029 685727 1 T A - ReadM SNP 0008.scaffold00029 685770 1 G A - ReadM SNP 0008.scaffold00029 685813 1 A C - ReadM SNP 0008.scaffold00029 686086 1 T C - ReadM SNP 0008.scaffold00029 687107 1 T C - ReadM SNP 0008.scaffold00029 687263 1 A G - ReadM SNP 0008.scaffold00029 687627 1 G A - ReadM SNP 0008.scaffold00029 687651 1 T C - ReadM SNP 0008.scaffold00029 687697 1 T A - ReadM SNP 0008.scaffold00029 687724 1 A G - ReadM SNP 0008.scaffold00029 687822 1 G A - ReadM SNP 0008.scaffold00029 687849 1 T C - Both SNP 0008.scaffold00029 688203 1 T C scaffold29254 ScafM SNP 0008.scaffold00029 688600 2 AG CA scaffold29254 Both SNP 0008.scaffold00029 688669 1 T G scaffold29254 Both SNP 0008.scaffold00029 688764 1 G T scaffold29254 Both SNP 0008.scaffold00029 688820 1 C T scaffold29254 Both SNP 0008.scaffold00029 688822 1 A G scaffold29254 Both SNP 0008.scaffold00029 688885 1 C T scaffold29254 ReadM SNP 0008.scaffold00029 688920 1 G A - ReadM SNP 0008.scaffold00029 688923 1 G A - ScafM SNP 0008.scaffold00029 688999 1 A C scaffold29254 ScafM INDEL 0008.scaffold00029 689005 1 T . scaffold29254 ScafM SNP 0008.scaffold00029 689008 1 C T scaffold29254 ReadM SNP 0008.scaffold00029 689114 1 A G - ReadM SNP 0008.scaffold00029 689154 1 T G - Both SNP 0008.scaffold00029 689278 1 G A scaffold29254 Both SNP 0008.scaffold00029 689343 1 T A scaffold29254 Both SNP 0008.scaffold00029 689471 1 T C scaffold29254 ReadM SNP 0008.scaffold00029 689663 1 C T - ReadM SNP 0008.scaffold00029 689731 1 G A - Both SNP 0008.scaffold00029 689919 1 A T scaffold29254 Both SNP 0008.scaffold00029 689989 1 C T scaffold29254 ReadM SNP 0008.scaffold00029 690001 1 G T - ReadM SNP 0008.scaffold00029 690117 1 C A - ReadM SNP 0008.scaffold00029 690147 1 A G - ReadM SNP 0008.scaffold00029 690324 1 G T - ReadM SNP 0008.scaffold00029 690336 1 G C - ReadM SNP 0008.scaffold00029 690401 1 T C - ReadM SNP 0008.scaffold00029 690731 1 T G - ReadM SNP 0008.scaffold00029 690767 1 A G - ReadM SNP 0008.scaffold00029 690788 1 C G - ReadM SNP 0008.scaffold00029 690826 1 T C - ReadM SNP 0008.scaffold00029 690960 1 G A - ReadM SNP 0008.scaffold00029 690995 1 C T - ReadM SNP 0008.scaffold00029 691060 1 A G - ReadM SNP 0008.scaffold00029 691158 1 C A - ReadM SNP 0008.scaffold00029 691164 1 A G - ReadM SNP 0008.scaffold00029 691184 1 C T - ReadM SNP 0008.scaffold00029 691258 1 A G - ReadM SNP 0008.scaffold00029 691337 1 C T - ReadM SNP 0008.scaffold00029 691345 1 C T - ReadM SNP 0008.scaffold00029 691683 1 A G - ReadM SNP 0008.scaffold00029 691732 1 A T - ReadM SNP 0008.scaffold00029 691762 1 C T - ReadM SNP 0008.scaffold00029 691773 1 A C - ReadM SNP 0008.scaffold00029 691799 1 C T - ReadM SNP 0008.scaffold00029 691914 1 T C - ReadM SNP 0008.scaffold00029 691935 1 A C - ReadM SNP 0008.scaffold00029 691956 1 T C - ReadM SNP 0008.scaffold00029 692062 1 T A - ReadM SNP 0008.scaffold00029 692084 1 T C - ReadM SNP 0008.scaffold00029 692092 1 A G - Both SNP 0008.scaffold00029 692244 1 A G scaffold29254 Both INDEL 0008.scaffold00029 692331 1 A . scaffold29254 Both SNP 0008.scaffold00029 692387 1 A T scaffold29254 Both SNP 0008.scaffold00029 692405 1 C T scaffold29254 Both SNP 0008.scaffold00029 692647 1 A G scaffold29254 ReadM SNP 0008.scaffold00029 692779 1 C T - ReadM SNP 0008.scaffold00029 692845 1 G A - Both SNP 0008.scaffold00029 692955 1 T C scaffold29254 ScafM SNP 0008.scaffold00029 693039 1 T C scaffold29254 ScafM INDEL 0008.scaffold00029 693135 4 TTGT .... scaffold29254 ScafM SNP 0008.scaffold00029 693146 1 T C scaffold29254 ScafM SNP 0008.scaffold00029 693186 1 G A scaffold29254 ScafM INDEL 0008.scaffold00029 693264 1 . A scaffold29254 Both SNP 0008.scaffold00029 694748 1 C A scaffold29254 Both SNP 0008.scaffold00029 694773 1 A G scaffold29254 Both SNP 0008.scaffold00029 694780 1 C T scaffold29254 ScafM SNP 0008.scaffold00029 694892 1 C T scaffold29254 Both SNP 0008.scaffold00029 694931 1 C T scaffold29254 ScafM SNP 0008.scaffold00029 695226 1 G A scaffold29254 Both SNP 0008.scaffold00029 695270 1 T C scaffold29254 Both SNP 0008.scaffold00029 695284 1 A C scaffold29254 Both INDEL 0008.scaffold00029 695369 2 .. TT scaffold29254 ScafM SNP 0008.scaffold00029 695777 2 AG CC scaffold29254 ScafM SNP 0008.scaffold00029 695789 1 T C scaffold29254 ScafM SNP 0008.scaffold00029 695799 1 C T scaffold29254 Both SNP 0008.scaffold00029 695842 1 C T scaffold29254 ScafM SNP 0008.scaffold00029 695964 1 G A scaffold29254 Both SNP 0008.scaffold00029 696042 1 A T scaffold29254 ScafM SNP 0008.scaffold00029 696071 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 696108 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 696177 1 G A scaffold29254 ScafM INDEL 0008.scaffold00029 696208 2 .. CT scaffold29254 ScafM INDEL 0008.scaffold00029 696306 6 TCTAGG ...... scaffold29254 ScafM SNP 0008.scaffold00029 696319 1 A G scaffold29254 ReadM SNP 0008.scaffold00029 696618 1 C T - Both SNP 0008.scaffold00029 696886 1 A G scaffold29254 Both SNP 0008.scaffold00029 696913 1 A G scaffold29254 ScafM SNP 0008.scaffold00029 696952 1 C T scaffold29254 ScafM SNP 0008.scaffold00029 696958 1 C T scaffold29254 Both SNP 0008.scaffold00029 697018 1 C G scaffold29254 ScafM INDEL 0008.scaffold00029 697293 4 TTTT .... scaffold29254 Both SNP 0008.scaffold00029 697342 1 C T scaffold29254 Both SNP 0008.scaffold00029 697375 1 A G scaffold29254 Both SNP 0008.scaffold00029 697561 1 C T scaffold29254 Both SNP 0008.scaffold00029 697817 1 T A scaffold29254 Both SNP 0008.scaffold00029 697820 1 A G scaffold29254 Both SNP 0008.scaffold00029 697898 1 T A scaffold29254 Both SNP 0008.scaffold00029 697904 1 A G scaffold29254 ScafM SNP 0008.scaffold00029 697961 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 698040 1 A T scaffold29254 Both SNP 0008.scaffold00029 698067 1 C A scaffold29254 Both SNP 0008.scaffold00029 698126 1 G C scaffold29254 Both SNP 0008.scaffold00029 698186 1 G A scaffold29254 Both SNP 0008.scaffold00029 698512 1 A C scaffold29254 Both SNP 0008.scaffold00029 698674 1 C G scaffold29254 Both SNP 0008.scaffold00029 698957 1 A G scaffold29254 ScafM INDEL 0008.scaffold00029 699015 2 .. TT scaffold29254 Both SNP 0008.scaffold00029 699394 1 G T scaffold29254 Both INDEL 0008.scaffold00029 699400 2 .. TG scaffold29254 Both SNP 0008.scaffold00029 699456 1 A C scaffold29254 Both SNP 0008.scaffold00029 699494 1 G A scaffold29254 Both SNP 0008.scaffold00029 699574 1 G A scaffold29254 Both SNP 0008.scaffold00029 699627 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 699801 1 A T scaffold29254 ScafM SNP 0008.scaffold00029 699823 1 T C scaffold29254 Both SNP 0008.scaffold00029 699859 1 T G scaffold29254 Both SNP 0008.scaffold00029 699867 1 A G scaffold29254 Both SNP 0008.scaffold00029 699958 1 A C scaffold29254 Both SNP 0008.scaffold00029 699981 1 G A scaffold29254 Both INDEL 0008.scaffold00029 700011 1 T . scaffold29254 ScafM SNP 0008.scaffold00029 700038 1 A G scaffold29254 ScafM SNP 0008.scaffold00029 700226 1 T A scaffold29254 ScafM SNP 0008.scaffold00029 700510 1 A G scaffold29254 Both SNP 0008.scaffold00029 700593 1 C G scaffold29254 Both INDEL 0008.scaffold00029 700801 1 T . scaffold29254 Both SNP 0008.scaffold00029 700819 1 C G scaffold29254 Both SNP 0008.scaffold00029 700889 1 A G scaffold29254 Both SNP 0008.scaffold00029 700937 2 AA TG scaffold29254 Both SNP 0008.scaffold00029 701119 1 G T scaffold29254 ScafM SNP 0008.scaffold00029 701179 1 G A scaffold29254 Both SNP 0008.scaffold00029 701212 1 A G scaffold29254 Both SNP 0008.scaffold00029 701345 1 A C scaffold29254 ScafM INDEL 0008.scaffold00029 701378 1 . C scaffold29254 Both SNP 0008.scaffold00029 701401 1 T C scaffold29254 Both SNP 0008.scaffold00029 701412 1 C G scaffold29254 ScafM SNP 0008.scaffold00029 701502 1 C T scaffold29254 ScafM INDEL 0008.scaffold00029 701544 1 . G scaffold29254 ScafM INDEL 0008.scaffold00029 701567 1 T . scaffold29254 ReadM SNP 0008.scaffold00029 701636 1 T C - ReadM SNP 0008.scaffold00029 701674 1 G A - Both SNP 0008.scaffold00029 701914 1 A T scaffold29254 ScafM SNP 0008.scaffold00029 701979 1 A C scaffold29254 Both SNP 0008.scaffold00029 702256 1 T C scaffold29254 ScafM SNP 0008.scaffold00029 702350 1 A C scaffold29254 ScafM SNP 0008.scaffold00029 702353 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 702360 2 TG AC scaffold29254 ScafM SNP 0008.scaffold00029 702370 1 A G scaffold29254 ScafM INDEL 0008.scaffold00029 702513 4 .... TAGC scaffold29254 Both SNP 0008.scaffold00029 702555 1 C T scaffold29254 Both SNP 0008.scaffold00029 702615 1 G T scaffold29254 Both SNP 0008.scaffold00029 702629 1 C T scaffold29254 ScafM SNP 0008.scaffold00029 702675 1 G A scaffold29254 ScafM INDEL 0008.scaffold00029 702716 14 .............. TATAGGCCAGTAGG scaffold29254 ScafM SNP 0008.scaffold00029 702740 1 G A scaffold29254 ScafM SNP 0008.scaffold00029 702767 1 G C scaffold29254 ScafM SNP 0008.scaffold00029 702781 1 T C scaffold29254 ScafM INDEL 0008.scaffold00029 702794 1 . C scaffold29254 Both SNP 0008.scaffold00029 702848 1 T A scaffold29254 Both SNP 0008.scaffold00029 702882 1 G T scaffold29254 ScafM SNP 0008.scaffold00029 703161 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 703218 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 703236 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 703249 1 A G scaffold26310 ScafM SNP 0008.scaffold00029 703278 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 703322 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 703372 1 C G scaffold26310 ScafM SNP 0008.scaffold00029 703376 1 T G scaffold26310 ScafM SNP 0008.scaffold00029 703407 1 G A scaffold26310 ScafM SNP 0008.scaffold00029 703416 1 T A scaffold26310 ScafM SNP 0008.scaffold00029 703432 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 703449 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 703475 1 G A scaffold26310 ScafM SNP 0008.scaffold00029 703494 1 T G scaffold26310 ScafM SNP 0008.scaffold00029 703520 3 GGC AAT scaffold26310 Both SNP 0008.scaffold00029 703554 1 C T scaffold26310 Both SNP 0008.scaffold00029 703603 1 A C scaffold26310 ScafM INDEL 0008.scaffold00029 703662 8 GACTTGTA ........ scaffold26310 ScafM SNP 0008.scaffold00029 703691 1 A T scaffold26310 ScafM SNP 0008.scaffold00029 703717 1 G C scaffold26310 ScafM SNP 0008.scaffold00029 703722 1 G C scaffold26310 ScafM SNP 0008.scaffold00029 703753 1 A G scaffold26310 ReadM SNP 0008.scaffold00029 704944 1 A G - ReadM SNP 0008.scaffold00029 705041 1 T C - ReadM SNP 0008.scaffold00029 705088 1 A T - ReadM SNP 0008.scaffold00029 705211 1 A T - ReadM SNP 0008.scaffold00029 705214 1 C T - ReadM SNP 0008.scaffold00029 705216 1 A G - ReadM INDEL 0008.scaffold00029 705380 1 . T - ReadM SNP 0008.scaffold00029 705422 1 C G - ReadM SNP 0008.scaffold00029 705468 1 A C - ScafM SNP 0008.scaffold00029 706254 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 706281 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 706321 1 G A scaffold26310 ScafM INDEL 0008.scaffold00029 706375 4 .... GCGA scaffold26310 ScafM SNP 0008.scaffold00029 706377 1 T G scaffold26310 ScafM SNP 0008.scaffold00029 706403 2 GG TA scaffold26310 ScafM SNP 0008.scaffold00029 706425 1 G A scaffold26310 ScafM SNP 0008.scaffold00029 706433 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 706439 1 C G scaffold26310 ScafM SNP 0008.scaffold00029 706459 1 A G scaffold26310 ScafM SNP 0008.scaffold00029 706481 1 A G scaffold26310 ScafM SNP 0008.scaffold00029 706497 2 CA TC scaffold26310 ScafM INDEL 0008.scaffold00029 706508 5 AACAG ..... scaffold26310 ScafM SNP 0008.scaffold00029 706561 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 706571 2 CT TC scaffold26310 ScafM INDEL 0008.scaffold00029 706584 5 AGCGA ..... scaffold26310 ScafM SNP 0008.scaffold00029 706639 2 TA AT scaffold26310 ScafM SNP 0008.scaffold00029 706667 1 G A scaffold26310 ScafM SNP 0008.scaffold00029 706686 1 A G scaffold26310 ScafM SNP 0008.scaffold00029 706722 1 C T scaffold26310 ScafM SNP 0008.scaffold00029 706740 1 T C scaffold26310 Both INDEL 0008.scaffold00029 708286 1 . T scaffold7667 Both SNP 0008.scaffold00029 708585 1 C T scaffold7667 ScafM SNP 0008.scaffold00029 710134 1 G A scaffold14164 ScafM SNP 0008.scaffold00029 710136 1 C A scaffold14164 ScafM SNP 0008.scaffold00029 711561 1 C G scaffold26310 ScafM SNP 0008.scaffold00029 711567 1 T A scaffold26310 ScafM SNP 0008.scaffold00029 711569 1 C A scaffold26310 ScafM INDEL 0008.scaffold00029 711576 2 TG .. scaffold26310 ScafM INDEL 0008.scaffold00029 711752 14 .............. ACTGACCACTGACC scaffold26310 ScafM SNP 0008.scaffold00029 711780 1 C A scaffold26310 ScafM SNP 0008.scaffold00029 711784 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 711905 1 T A scaffold26310 Both SNP 0008.scaffold00029 711991 1 A T scaffold26310 Both SNP 0008.scaffold00029 712097 1 T A scaffold26310 ScafM SNP 0008.scaffold00029 712108 1 A G scaffold26310 ScafM INDEL 0008.scaffold00029 712117 2 .. TT scaffold26310 Both INDEL 0008.scaffold00029 712165 1 . A scaffold26310 Both SNP 0008.scaffold00029 712204 1 C T scaffold26310 ScafM INDEL 0008.scaffold00029 712258 4 .... ACAT scaffold26310 ScafM SNP 0008.scaffold00029 712271 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 712295 1 T G scaffold26310 ScafM SNP 0008.scaffold00029 712298 1 A G scaffold26310 Both SNP 0008.scaffold00029 712353 1 A C scaffold26310 Both INDEL 0008.scaffold00029 712412 1 A . scaffold26310 ScafM SNP 0008.scaffold00029 712468 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 712511 1 C G scaffold26310 ScafM INDEL 0008.scaffold00029 712535 3 AAG ... scaffold26310 ScafM SNP 0008.scaffold00029 712547 1 G A scaffold26310 Both SNP 0008.scaffold00029 712582 1 A G scaffold26310 Both SNP 0008.scaffold00029 712600 1 T C scaffold26310 Both SNP 0008.scaffold00029 712681 1 C T scaffold26310 Both INDEL 0008.scaffold00029 712706 1 C . scaffold26310 Both SNP 0008.scaffold00029 712741 1 G C scaffold26310 ScafM SNP 0008.scaffold00029 712754 1 C A scaffold26310 ReadM INDEL 0008.scaffold00029 712983 2 AC .. - ScafM INDEL 0008.scaffold00029 715175 1 . T scaffold26310 ScafM INDEL 0008.scaffold00029 716617 1 . T scaffold26310 ScafM INDEL 0008.scaffold00029 732221 55 ....................................................... CCACATCAGGTGACAAAAAAACTTGATCCAATTTGTCAAACTTATCTAGTTCTTT scaffold26310 ScafM SNP 0008.scaffold00029 732317 1 A G scaffold26310 ScafM SNP 0008.scaffold00029 732373 2 GA AT scaffold26310 ScafM SNP 0008.scaffold00029 732390 1 T C scaffold26310 ScafM SNP 0008.scaffold00029 732475 1 G A scaffold26310 ScafM INDEL 0008.scaffold00029 741886 29 ............................. TTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold26310 ReadM SNP 0008.scaffold00029 744572 1 C T - ScafM INDEL 0008.scaffold00029 756295 1 G . scaffold26078 ScafM INDEL 0008.scaffold00029 759966 57 ......................................................... TCCTAGTCATTTCCAACAGTAACAAATAGGAACCTGAACTGTCATATATGAATTCTC scaffold26078 ScafM INDEL 0008.scaffold00029 764347 8 ........ AATTGCTA scaffold7883 ScafM SNP 0008.scaffold00029 765815 2 GA AG scaffold7883 ReadM INDEL 0008.scaffold00029 770072 1 . A - ReadM SNP 0008.scaffold00029 770897 1 C G - ScafM INDEL 0008.scaffold00029 801234 1 . A scaffold7883 ReadM SNP 0008.scaffold00029 834816 1 C T - ReadM SNP 0008.scaffold00029 835411 1 C T - ScafM INDEL 0008.scaffold00029 840592 1 G . scaffold41347 ScafM SNP 0008.scaffold00029 841346 1 T C scaffold41347 Both SNP 0008.scaffold00029 854592 1 C G scaffold16955 ReadM SNP 0008.scaffold00029 855723 1 A G - ScafM SNP 0008.scaffold00029 861136 1 C G scaffold5133 ScafM SNP 0008.scaffold00029 861150 1 T C scaffold5133 ScafM SNP 0008.scaffold00029 861153 1 A T scaffold5133 ScafM SNP 0008.scaffold00029 861185 1 T C scaffold5133 ScafM SNP 0008.scaffold00029 861288 1 T C scaffold5133 ScafM SNP 0008.scaffold00029 861645 1 A C scaffold5133 ScafM SNP 0008.scaffold00029 861752 1 T C scaffold5133 ScafM SNP 0008.scaffold00029 861786 1 A G scaffold5133 ScafM SNP 0008.scaffold00029 861916 1 C T scaffold5133 ScafM SNP 0008.scaffold00029 862095 3 CAT GTA scaffold5133 ScafM SNP 0008.scaffold00029 862189 1 T G scaffold5133 ScafM SNP 0008.scaffold00029 862272 1 C T scaffold5133 ScafM SNP 0008.scaffold00029 862372 1 G A scaffold5133 ScafM SNP 0008.scaffold00029 862389 1 T C scaffold5133 ScafM SNP 0008.scaffold00029 862421 1 C A scaffold5133 ScafM INDEL 0008.scaffold00029 862489 1 A . scaffold5133 ScafM SNP 0008.scaffold00029 862522 1 C T scaffold5133 ScafM INDEL 0008.scaffold00029 862606 1 T . scaffold5133 ScafM SNP 0008.scaffold00029 862638 1 C T scaffold5133 ScafM INDEL 0008.scaffold00029 867675 2 .. AA scaffold2543 ScafM SNP 0008.scaffold00029 883021 1 T C scaffold2543 ScafM SNP 0008.scaffold00029 892677 1 C T scaffold20810 ScafM SNP 0008.scaffold00029 892683 1 G T scaffold20810 ScafM SNP 0008.scaffold00029 892704 1 G A scaffold20810 ScafM SNP 0008.scaffold00029 892723 1 A T scaffold20810 ScafM SNP 0008.scaffold00029 892755 1 G A scaffold20810 ScafM SNP 0008.scaffold00029 892761 1 G T scaffold20810 ScafM SNP 0008.scaffold00029 892779 1 T C scaffold20810 ScafM SNP 0008.scaffold00029 892822 1 A G scaffold20810 ReadM SNP 0008.scaffold00029 895621 1 A G - ScafM INDEL 0008.scaffold00029 899096 8 TGGTATGA ........ scaffold2543 ScafM INDEL 0008.scaffold00029 899105 6 TGGTAT ...... scaffold2543 ScafM INDEL 0008.scaffold00029 899116 1 T . scaffold2543 ScafM INDEL 0008.scaffold00029 899118 1 A . scaffold2543 ReadM SNP 0008.scaffold00029 904874 1 C G - ScafM SNP 0008.scaffold00029 921556 2 TA GG scaffold2543 ScafM INDEL 0008.scaffold00029 922382 4 CTAA .... scaffold2543 ScafM INDEL 0008.scaffold00029 922390 3 TAT ... scaffold2543 ScafM INDEL 0008.scaffold00029 922394 6 TAGATA ...... scaffold2543 ScafM INDEL 0008.scaffold00029 922401 4 TTGA .... scaffold2543 ScafM INDEL 0008.scaffold00029 922407 7 GGATAGT ......C scaffold2543 ScafM INDEL 0008.scaffold00029 922416 4 GTAA .... scaffold2543 ScafM INDEL 0008.scaffold00029 922421 4 TTAA .... scaffold2543 ScafM SNP 0008.scaffold00029 927656 1 G T scaffold2543 ScafM SNP 0008.scaffold00029 929388 1 C T scaffold2543 Both SNP 0008.scaffold00029 933766 1 A C scaffold2543 ScafM SNP 0008.scaffold00029 933814 1 A C scaffold2543 ScafM SNP 0008.scaffold00029 933816 1 G A scaffold2543 ScafM SNP 0008.scaffold00029 941135 1 G T scaffold8452 ScafM SNP 0008.scaffold00029 941233 1 T C scaffold8452 ScafM SNP 0008.scaffold00029 941287 1 C T scaffold8452 ScafM INDEL 0008.scaffold00029 941298 1 . A scaffold8452 ScafM SNP 0008.scaffold00029 941324 1 A G scaffold8452 ScafM SNP 0008.scaffold00029 941339 1 T C scaffold8452 ScafM SNP 0008.scaffold00029 941372 1 C T scaffold8452 ScafM INDEL 0008.scaffold00029 941380 1 . T scaffold8452 ScafM SNP 0008.scaffold00029 941387 1 C A scaffold8452 Both SNP 0008.scaffold00029 941516 1 A G scaffold2286 ScafM SNP 0008.scaffold00029 941556 1 C T scaffold2286 ScafM SNP 0008.scaffold00029 941653 1 T C scaffold2286 ScafM SNP 0008.scaffold00029 945332 1 T A scaffold22903 ScafM SNP 0008.scaffold00029 945343 1 A T scaffold22903 ScafM SNP 0008.scaffold00029 945369 1 A T scaffold22903 ScafM INDEL 0008.scaffold00029 945376 4 CAAG .... scaffold22903 ScafM SNP 0008.scaffold00029 945448 1 C T scaffold22903 ScafM SNP 0008.scaffold00029 945465 1 T G scaffold22903 ScafM SNP 0008.scaffold00029 945476 1 T C scaffold22903 ScafM SNP 0008.scaffold00029 945498 1 T A scaffold22903 ScafM SNP 0008.scaffold00029 945501 1 A T scaffold22903 ScafM INDEL 0008.scaffold00029 945518 29 TTAAGCTTAAAAAAATGTTGTTGAAGCTT ............................. scaffold22903 ScafM SNP 0008.scaffold00029 945632 1 T C scaffold22903 ScafM SNP 0008.scaffold00029 945659 1 C G scaffold22903 ScafM SNP 0008.scaffold00029 945677 1 G A scaffold22903 ScafM SNP 0008.scaffold00029 945703 1 C T scaffold22903 ScafM SNP 0008.scaffold00029 945748 1 T A scaffold22903 ScafM SNP 0008.scaffold00029 945750 1 T G scaffold22903 ScafM SNP 0008.scaffold00029 945752 1 G T scaffold22903 ScafM SNP 0008.scaffold00029 945757 1 A G scaffold22903 ScafM SNP 0008.scaffold00029 945779 1 G A scaffold22903 ScafM SNP 0008.scaffold00029 945813 1 C T scaffold22903 ScafM SNP 0008.scaffold00029 945822 2 GG TA scaffold22903 ScafM SNP 0008.scaffold00029 945848 1 C G scaffold22903 ScafM SNP 0008.scaffold00029 945851 1 C T scaffold22903 ScafM SNP 0008.scaffold00029 945876 2 AA CT scaffold22903 Both INDEL 0008.scaffold00029 967691 1 . T scaffold27997 ReadM SNP 0008.scaffold00029 976513 1 T C - ReadM SNP 0008.scaffold00029 976519 1 C T - ScafM SNP 0008.scaffold00029 978211 1 A T scaffold12619 ScafM SNP 0008.scaffold00029 993504 1 T G scaffold12619 ScafM SNP 0008.scaffold00029 993507 1 G T scaffold12619 ReadM SNP 0008.scaffold00029 1008082 1 G T - ScafM INDEL 0008.scaffold00029 1009368 8 ........ TTTTTTTT scaffold12619 ScafM SNP 0008.scaffold00029 1011362 1 T C scaffold12619 ScafM INDEL 0008.scaffold00029 1012312 1 . A scaffold12619 ScafM SNP 0008.scaffold00029 1062454 1 G A scaffold10511 ScafM INDEL 0008.scaffold00029 1078715 2 .. CA scaffold10511 ScafM SNP 0008.scaffold00029 1078717 1 C A scaffold10511 ScafM INDEL 0008.scaffold00029 1090929 1 . C scaffold10511 ScafM INDEL 0008.scaffold00029 1117250 1 . C scaffold16278 ScafM SNP 0008.scaffold00029 1120307 1 T C scaffold16278 ScafM INDEL 0008.scaffold00029 1145185 16 ................ GGGGGGGGGGGGGGGG scaffold16278 ScafM INDEL 0008.scaffold00029 1145827 11 ........... CCCCCCCCCCC scaffold16278 ScafM SNP 0008.scaffold00029 1149237 1 A C scaffold16278 ScafM INDEL 0008.scaffold00029 1149243 11 TTCCTTCTCAT ........... scaffold16278 ScafM INDEL 0008.scaffold00029 1154183 5 ..... GGGGG scaffold16278 ScafM INDEL 0008.scaffold00029 1163246 25 ......................... AAAAAAAAAAAAAAAAAAAAAAAAA scaffold5926 ScafM INDEL 0008.scaffold00029 1163783 1 . C scaffold5926 ScafM SNP 0008.scaffold00029 1226376 1 A C scaffold14326 ScafM INDEL 0008.scaffold00029 1226412 1 . T scaffold14326 ScafM SNP 0008.scaffold00029 1244139 1 G A scaffold14326 ScafM SNP 0008.scaffold00029 1244299 1 G A scaffold14326 ScafM SNP 0008.scaffold00029 1244473 1 G A scaffold14326 ScafM INDEL 0008.scaffold00029 1247992 6 ...... AAAAAA scaffold14326 ScafM INDEL 0008.scaffold00029 1251502 1 . T scaffold14326 ScafM SNP 0008.scaffold00029 1251568 2 TG GT scaffold14326 ScafM INDEL 0008.scaffold00029 1251675 2 GG .A scaffold14326 Both SNP 0008.scaffold00029 1267684 1 C T scaffold14326 ScafM SNP 0008.scaffold00029 1267758 1 C A scaffold14326 ScafM SNP 0008.scaffold00029 1286060 2 GT AC scaffold12069 ScafM INDEL 0008.scaffold00029 1288561 2 .. AA scaffold12069 ScafM INDEL 0008.scaffold00029 1294121 8 ........ GGGGGGGG scaffold12069 ScafM INDEL 0008.scaffold00029 1300492 18 .................. TTTTTTTTTTTTTCTTTT scaffold12069 ReadM SNP 0008.scaffold00029 1350613 1 G T - ScafM INDEL 0008.scaffold00029 1351563 1 . A scaffold5201 ScafM SNP 0008.scaffold00029 1351569 1 G A scaffold5201 ScafM SNP 0008.scaffold00029 1351585 1 T C scaffold5201 ScafM SNP 0008.scaffold00029 1351592 2 AT GC scaffold5201 ScafM SNP 0008.scaffold00029 1351602 1 T G scaffold5201 ScafM SNP 0008.scaffold00029 1351624 1 A T scaffold5201 ScafM SNP 0008.scaffold00029 1351680 2 TA CG scaffold5201 ScafM SNP 0008.scaffold00029 1351688 2 CC TT scaffold5201 ScafM INDEL 0008.scaffold00029 1351783 1 . A scaffold5201 ScafM SNP 0008.scaffold00029 1351805 1 C G scaffold5201 ScafM INDEL 0008.scaffold00029 1351864 2 .G CA scaffold5201 ScafM SNP 0008.scaffold00029 1351907 1 C T scaffold5201 ReadM SNP 0008.scaffold00029 1365378 1 T C - ScafM INDEL 0008.scaffold00029 1378393 1 . T scaffold2379 ScafM SNP 0008.scaffold00029 1383118 1 T C scaffold2379 ScafM INDEL 0008.scaffold00029 1383150 2 .. GC scaffold2379 ScafM INDEL 0008.scaffold00029 1383154 2 GC .A scaffold2379 ScafM SNP 0008.scaffold00029 1383170 1 A G scaffold2379 ScafM SNP 0008.scaffold00029 1383179 1 T A scaffold2379 ScafM SNP 0008.scaffold00029 1383197 1 C T scaffold2379 ScafM INDEL 0008.scaffold00029 1383211 11 ........... CTAGAGATGCT scaffold2379 ScafM INDEL 0008.scaffold00029 1383212 1 . C scaffold2379 ReadM INDEL 0008.scaffold00029 1384882 1 . A - ReadM SNP 0008.scaffold00029 1409654 1 T C - ScafM INDEL 0009.scaffold00036 131 1 . A scaffold4590 ScafM INDEL 0009.scaffold00036 134 12 ............ TTCCTTAATTGA scaffold4590 ScafM SNP 0009.scaffold00036 185 1 A G scaffold4590 ScafM SNP 0009.scaffold00036 188 1 A T scaffold4590 ScafM SNP 0009.scaffold00036 289 1 G A scaffold4590 ScafM INDEL 0009.scaffold00036 2061 22 ...................... TAATGTTATGTTGGTTGAACAA scaffold4590 ScafM SNP 0009.scaffold00036 2339 2 AA TT scaffold4590 Both SNP 0009.scaffold00036 4588 1 G A scaffold4590 Both INDEL 0009.scaffold00036 8454 1 A . scaffold4590 Both SNP 0009.scaffold00036 9385 1 T G scaffold4590 Both SNP 0009.scaffold00036 10062 1 G A scaffold4590 Both SNP 0009.scaffold00036 12458 1 T C scaffold4590 ReadM SNP 0009.scaffold00036 15841 1 A G - ReadM SNP 0009.scaffold00036 16213 1 A G - Both INDEL 0009.scaffold00036 16927 1 A . scaffold4590 ScafM INDEL 0009.scaffold00036 17740 24 ........................ TTTTTTTTTTTTTTTTTTTTTTTT scaffold4590 ScafM INDEL 0009.scaffold00036 18848 2 AA .. scaffold4590 ReadM SNP 0009.scaffold00036 19185 1 C A - ScafM INDEL 0009.scaffold00036 21484 3 AAT ... scaffold4590 Both SNP 0009.scaffold00036 21641 1 C T scaffold4590 ScafM SNP 0009.scaffold00036 21671 1 A G scaffold4590 ScafM SNP 0009.scaffold00036 21725 1 T C scaffold4590 ScafM INDEL 0009.scaffold00036 21729 1 A . scaffold4590 ScafM SNP 0009.scaffold00036 21731 1 T A scaffold4590 ScafM SNP 0009.scaffold00036 21733 2 AG CC scaffold4590 ScafM INDEL 0009.scaffold00036 21736 3 TAT ..G scaffold4590 ScafM SNP 0009.scaffold00036 21741 1 A G scaffold4590 ScafM INDEL 0009.scaffold00036 21743 4 CACG .... scaffold4590 ScafM SNP 0009.scaffold00036 21748 1 A T scaffold4590 ScafM SNP 0009.scaffold00036 21750 1 A C scaffold4590 ScafM SNP 0009.scaffold00036 21752 1 G A scaffold4590 ScafM SNP 0009.scaffold00036 21754 1 C T scaffold4590 ScafM SNP 0009.scaffold00036 21756 1 G A scaffold4590 ScafM SNP 0009.scaffold00036 21758 2 GG TT scaffold4590 ScafM INDEL 0009.scaffold00036 21764 14 GAGAAAAAAAAAAC .............. scaffold4590 ScafM INDEL 0009.scaffold00036 21779 1 T . scaffold4590 ScafM INDEL 0009.scaffold00036 21783 2 .. GG scaffold4590 ScafM SNP 0009.scaffold00036 21791 1 A C scaffold4590 ScafM SNP 0009.scaffold00036 21810 1 T G scaffold4590 ScafM INDEL 0009.scaffold00036 21832 2 AA .. scaffold4590 ScafM INDEL 0009.scaffold00036 21907 1 T . scaffold4590 Both INDEL 0009.scaffold00036 21929 2 .. TT scaffold4590 Both SNP 0009.scaffold00036 26099 1 T C scaffold4590 Both SNP 0009.scaffold00036 26363 1 T C scaffold4590 Both INDEL 0009.scaffold00036 27022 1 . T scaffold4590 Both SNP 0009.scaffold00036 27367 1 T G scaffold4590 Both SNP 0009.scaffold00036 27708 1 G A scaffold4590 ReadM SNP 0009.scaffold00036 31265 1 A C - ReadM SNP 0009.scaffold00036 33152 1 C T - Both SNP 0009.scaffold00036 38228 1 A G scaffold9033 Both SNP 0009.scaffold00036 40667 1 T G scaffold9033 ReadM SNP 0009.scaffold00036 41982 1 A T - Both SNP 0009.scaffold00036 42674 1 G A scaffold9033 ScafM SNP 0009.scaffold00036 44169 1 C T scaffold9033 ScafM SNP 0009.scaffold00036 44230 1 G C scaffold9033 ScafM SNP 0009.scaffold00036 44250 1 T C scaffold9033 ScafM SNP 0009.scaffold00036 44332 1 C A scaffold9033 ScafM SNP 0009.scaffold00036 44375 1 T C scaffold9033 ScafM SNP 0009.scaffold00036 44455 1 T C scaffold9033 ScafM SNP 0009.scaffold00036 50563 1 G A scaffold5721 ReadM SNP 0009.scaffold00036 51338 1 G A - Both SNP 0009.scaffold00036 51747 1 C T scaffold5721 ReadM SNP 0009.scaffold00036 54264 1 T G - ScafM SNP 0009.scaffold00036 54916 1 A G scaffold12374 ScafM SNP 0009.scaffold00036 54938 1 T A scaffold12374 ScafM SNP 0009.scaffold00036 54943 1 T C scaffold12374 ScafM SNP 0009.scaffold00036 54951 1 C G scaffold12374 ScafM SNP 0009.scaffold00036 54953 1 A G scaffold12374 ScafM SNP 0009.scaffold00036 54961 1 C T scaffold12374 ReadM SNP 0009.scaffold00036 56262 1 A T - ReadM SNP 0009.scaffold00036 57140 1 C G - ReadM SNP 0009.scaffold00036 61636 1 G C - ReadM SNP 0009.scaffold00036 63141 1 C T - ReadM SNP 0009.scaffold00036 65125 1 T C - ReadM SNP 0009.scaffold00036 65383 1 A G - ReadM SNP 0009.scaffold00036 66930 1 C G - ScafM SNP 0009.scaffold00036 77892 1 C T scaffold1438 ScafM SNP 0009.scaffold00036 77954 1 T C scaffold1438 ScafM SNP 0009.scaffold00036 78024 1 C T scaffold1438 ScafM SNP 0009.scaffold00036 78107 2 TA AC scaffold1438 ReadM SNP 0009.scaffold00036 80833 1 G A - ReadM SNP 0009.scaffold00036 81286 1 T A - ReadM SNP 0009.scaffold00036 82961 1 C T - ReadM SNP 0009.scaffold00036 82977 1 C T - Both SNP 0009.scaffold00036 84734 1 C A scaffold1438 ScafM SNP 0009.scaffold00036 85196 2 CA AC scaffold1438 ScafM INDEL 0009.scaffold00036 86759 1 T . scaffold1438 ReadM SNP 0009.scaffold00036 88614 1 A G - ReadM SNP 0009.scaffold00036 90496 1 A G - ReadM SNP 0009.scaffold00036 91096 1 C T - ReadM INDEL 0009.scaffold00036 91537 1 . G - ReadM SNP 0009.scaffold00036 91943 1 A G - Both SNP 0009.scaffold00036 92482 1 C T scaffold1438 Both SNP 0009.scaffold00036 92665 1 A C scaffold1438 ReadM SNP 0009.scaffold00036 94298 1 T A - ReadM INDEL 0009.scaffold00036 94527 1 . G - ReadM SNP 0009.scaffold00036 94899 1 G A - ReadM SNP 0009.scaffold00036 95833 1 T C - ReadM SNP 0009.scaffold00036 96258 1 A G - ReadM SNP 0009.scaffold00036 96582 1 C T - ReadM INDEL 0009.scaffold00036 96991 1 T . - ReadM SNP 0009.scaffold00036 97492 1 G A - ReadM SNP 0009.scaffold00036 99526 1 C A - ReadM SNP 0009.scaffold00036 100026 1 C T - ReadM SNP 0009.scaffold00036 104017 1 G A - Both SNP 0009.scaffold00036 105294 1 G A scaffold1438 ScafM INDEL 0009.scaffold00036 107067 1 . T scaffold1438 ScafM SNP 0009.scaffold00036 107388 1 T C scaffold1438 ScafM SNP 0009.scaffold00036 107470 1 T A scaffold1438 Both SNP 0009.scaffold00036 108938 1 T C scaffold1438 ScafM SNP 0009.scaffold00036 112546 1 C A scaffold1438 ScafM INDEL 0009.scaffold00036 114206 38 ...................................... TGTTTTCAGTTTTCAGATCAAGAGTTGTTTTCACAAGA scaffold1438 ReadM INDEL 0009.scaffold00036 114254 2 TA .. - Both SNP 0009.scaffold00036 118941 1 A G scaffold1438 ReadM INDEL 0009.scaffold00036 122204 2 .. TA - ScafM INDEL 0009.scaffold00036 123019 1 . T scaffold1438 Both INDEL 0009.scaffold00036 123067 1 . A scaffold1438 ScafM INDEL 0009.scaffold00036 123289 1 . A scaffold1438 ScafM INDEL 0009.scaffold00036 123390 1 . A scaffold1438 ScafM INDEL 0009.scaffold00036 124009 4 .... TATA scaffold1438 Both SNP 0009.scaffold00036 124454 1 T A scaffold1438 Both SNP 0009.scaffold00036 125380 1 A G scaffold1438 ReadM SNP 0009.scaffold00036 126538 1 C T - ReadM SNP 0009.scaffold00036 127211 1 G T - Both SNP 0009.scaffold00036 127962 1 C G scaffold1438 ReadM SNP 0009.scaffold00036 129910 1 A C - Both SNP 0009.scaffold00036 130857 1 T A scaffold1438 ScafM SNP 0009.scaffold00036 133643 1 T C scaffold1438 Both SNP 0009.scaffold00036 133927 1 A G scaffold1438 ScafM SNP 0009.scaffold00036 135624 1 T A scaffold1438 ReadM SNP 0009.scaffold00036 138234 1 T C - Both SNP 0009.scaffold00036 139120 1 G C scaffold1438 Both SNP 0009.scaffold00036 139173 1 A G scaffold1438 ScafM SNP 0009.scaffold00036 139910 1 G A scaffold1438 ScafM SNP 0009.scaffold00036 139931 1 G A scaffold1438 ReadM SNP 0009.scaffold00036 143650 1 A T - ReadM SNP 0009.scaffold00036 143668 1 G A - ScafM SNP 0009.scaffold00036 145753 1 A G scaffold21295 ScafM SNP 0009.scaffold00036 145763 1 A T scaffold21295 ReadM SNP 0009.scaffold00036 145792 1 C T - ScafM SNP 0009.scaffold00036 145811 1 G A scaffold21295 ScafM SNP 0009.scaffold00036 145853 1 T G scaffold21295 ScafM SNP 0009.scaffold00036 145882 1 T C scaffold21295 ScafM SNP 0009.scaffold00036 145918 1 G A scaffold21295 ScafM INDEL 0009.scaffold00036 145943 4 .... TTTA scaffold21295 ScafM SNP 0009.scaffold00036 145976 1 T C scaffold21295 ScafM SNP 0009.scaffold00036 146028 1 T C scaffold21295 ScafM SNP 0009.scaffold00036 146054 1 C T scaffold21295 ScafM SNP 0009.scaffold00036 146064 1 G A scaffold21295 ScafM SNP 0009.scaffold00036 146100 1 C A scaffold21295 ScafM SNP 0009.scaffold00036 146108 1 A G scaffold21295 ScafM SNP 0009.scaffold00036 146112 1 C T scaffold21295 ScafM SNP 0009.scaffold00036 146120 1 A G scaffold21295 ScafM SNP 0009.scaffold00036 146131 1 G A scaffold21295 ScafM SNP 0009.scaffold00036 146140 1 T A scaffold21295 ScafM INDEL 0009.scaffold00036 146148 3 ... AAA scaffold21295 ScafM SNP 0009.scaffold00036 146150 1 C A scaffold21295 ScafM SNP 0009.scaffold00036 146158 1 A C scaffold21295 ScafM SNP 0009.scaffold00036 146170 1 T G scaffold21295 ReadM SNP 0009.scaffold00036 147980 1 A C - ScafM SNP 0009.scaffold00036 149377 1 A C scaffold26834 ReadM SNP 0009.scaffold00036 154348 1 T G - ReadM SNP 0009.scaffold00036 154414 1 C G - ReadM SNP 0009.scaffold00036 154463 1 A G - ReadM SNP 0009.scaffold00036 161958 1 A G - ReadM SNP 0009.scaffold00036 162223 1 C T - ReadM SNP 0009.scaffold00036 162354 1 G A - Both SNP 0009.scaffold00036 163325 1 A C scaffold25901 ScafM INDEL 0009.scaffold00036 170477 1 T . scaffold7852 ScafM SNP 0009.scaffold00036 171401 1 T G scaffold7852 ScafM SNP 0009.scaffold00036 171450 1 T A scaffold7852 ScafM SNP 0009.scaffold00036 171565 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 171578 1 A G scaffold7852 ScafM SNP 0009.scaffold00036 171632 1 G A scaffold7852 ScafM SNP 0009.scaffold00036 171653 1 C T scaffold7852 ScafM SNP 0009.scaffold00036 171711 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 171785 2 AC CT scaffold7852 ScafM SNP 0009.scaffold00036 171788 1 C T scaffold7852 ScafM INDEL 0009.scaffold00036 171836 1 . C scaffold7852 ScafM SNP 0009.scaffold00036 172620 1 G A scaffold7852 ScafM SNP 0009.scaffold00036 172680 1 G A scaffold7852 ScafM INDEL 0009.scaffold00036 172720 3 ... ATG scaffold7852 ScafM SNP 0009.scaffold00036 172727 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 172751 1 C T scaffold7852 ScafM SNP 0009.scaffold00036 172781 1 C G scaffold7852 ScafM SNP 0009.scaffold00036 172797 1 G A scaffold7852 ScafM SNP 0009.scaffold00036 172851 1 C T scaffold7852 ScafM SNP 0009.scaffold00036 172872 1 C T scaffold7852 ScafM INDEL 0009.scaffold00036 172912 8 ........ ATGTTACT scaffold7852 ScafM SNP 0009.scaffold00036 172916 1 G T scaffold7852 ScafM SNP 0009.scaffold00036 172940 1 T A scaffold7852 ReadM SNP 0009.scaffold00036 174171 1 A C - ScafM INDEL 0009.scaffold00036 175053 54 ...................................................... TTAAGAGAAAAGACACACGAATTTTTACAAGGAAAACTTCCTAGGCCCAATAGG scaffold7852 ReadM SNP 0009.scaffold00036 176751 1 T A - ScafM SNP 0009.scaffold00036 179050 1 G T scaffold7852 ReadM SNP 0009.scaffold00036 181130 1 C T - Both SNP 0009.scaffold00036 181316 1 T C scaffold7852 ScafM INDEL 0009.scaffold00036 184206 1 T . scaffold7852 ScafM INDEL 0009.scaffold00036 184211 1 . T scaffold7852 ScafM INDEL 0009.scaffold00036 185279 1 . T scaffold7852 Both SNP 0009.scaffold00036 185818 1 G A scaffold7852 ReadM SNP 0009.scaffold00036 187130 1 G A - ReadM SNP 0009.scaffold00036 190398 1 T G - ScafM SNP 0009.scaffold00036 191171 1 A T scaffold7852 ScafM SNP 0009.scaffold00036 193508 1 T C scaffold7852 ReadM SNP 0009.scaffold00036 194997 1 C T - ReadM SNP 0009.scaffold00036 195640 1 G A - ReadM SNP 0009.scaffold00036 196171 1 G A - ScafM INDEL 0009.scaffold00036 196797 1 A . scaffold7852 ScafM SNP 0009.scaffold00036 197535 1 G T scaffold7852 Both SNP 0009.scaffold00036 200527 1 A G scaffold7852 ScafM SNP 0009.scaffold00036 201262 1 G A scaffold7852 ScafM SNP 0009.scaffold00036 204871 1 T A scaffold7852 ReadM SNP 0009.scaffold00036 205047 1 T A - ReadM SNP 0009.scaffold00036 205062 1 G T - Both SNP 0009.scaffold00036 205990 1 A T scaffold7852 ScafM SNP 0009.scaffold00036 206358 1 T C scaffold7852 ReadM INDEL 0009.scaffold00036 206384 1 G . - Both SNP 0009.scaffold00036 206447 1 G C scaffold7852 ScafM INDEL 0009.scaffold00036 207631 1 . A scaffold7852 ScafM SNP 0009.scaffold00036 207841 1 T G scaffold7852 ScafM INDEL 0009.scaffold00036 207894 4 .... ATTC scaffold7852 ScafM INDEL 0009.scaffold00036 207895 4 .... AAAC scaffold7852 ScafM SNP 0009.scaffold00036 207909 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 207926 1 C T scaffold7852 ScafM SNP 0009.scaffold00036 207941 1 G C scaffold7852 ScafM SNP 0009.scaffold00036 207944 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 208016 1 G A scaffold7852 ScafM SNP 0009.scaffold00036 208041 1 A T scaffold7852 ScafM SNP 0009.scaffold00036 208052 2 TG AA scaffold7852 ScafM SNP 0009.scaffold00036 208055 2 TT AA scaffold7852 ScafM SNP 0009.scaffold00036 208058 1 T A scaffold7852 ScafM INDEL 0009.scaffold00036 208061 3 TTA ... scaffold7852 ScafM INDEL 0009.scaffold00036 208067 3 TCG ... scaffold7852 ScafM SNP 0009.scaffold00036 208072 3 GTT AAG scaffold7852 ScafM INDEL 0009.scaffold00036 208077 1 C . scaffold7852 ScafM INDEL 0009.scaffold00036 208083 8 CTCTTACA ........ scaffold7852 ScafM INDEL 0009.scaffold00036 208094 1 T . scaffold7852 ScafM INDEL 0009.scaffold00036 208257 1 A . scaffold7852 ScafM SNP 0009.scaffold00036 208265 1 G A scaffold7852 Both SNP 0009.scaffold00036 208459 1 A T scaffold7852 Both SNP 0009.scaffold00036 208508 1 T C scaffold7852 Both SNP 0009.scaffold00036 208584 1 A G scaffold7852 ScafM SNP 0009.scaffold00036 208613 1 G C scaffold7852 ScafM SNP 0009.scaffold00036 208693 1 C A scaffold7852 ScafM SNP 0009.scaffold00036 208724 2 TA AT scaffold7852 ScafM SNP 0009.scaffold00036 208729 1 G A scaffold7852 ScafM INDEL 0009.scaffold00036 208730 2 .. AT scaffold7852 ScafM INDEL 0009.scaffold00036 208732 2 .. AG scaffold7852 ScafM INDEL 0009.scaffold00036 208734 1 . A scaffold7852 ScafM INDEL 0009.scaffold00036 208735 1 . A scaffold7852 ScafM SNP 0009.scaffold00036 208739 3 ACG CTT scaffold7852 ScafM SNP 0009.scaffold00036 208744 1 G T scaffold7852 ScafM INDEL 0009.scaffold00036 208745 2 .. TT scaffold7852 ScafM INDEL 0009.scaffold00036 208748 1 C . scaffold7852 ScafM SNP 0009.scaffold00036 208750 1 A T scaffold7852 ScafM INDEL 0009.scaffold00036 208751 1 . C scaffold7852 ScafM INDEL 0009.scaffold00036 208756 1 A . scaffold7852 ScafM SNP 0009.scaffold00036 208759 2 GA TC scaffold7852 ScafM SNP 0009.scaffold00036 208762 2 TC CG scaffold7852 ScafM INDEL 0009.scaffold00036 208765 4 .... TGAG scaffold7852 ScafM INDEL 0009.scaffold00036 208767 2 .. AG scaffold7852 ScafM INDEL 0009.scaffold00036 208768 2 .C AA scaffold7852 ScafM SNP 0009.scaffold00036 208798 1 G T scaffold7852 Both SNP 0009.scaffold00036 208814 1 A G scaffold7852 Both SNP 0009.scaffold00036 208868 1 T A scaffold7852 Both SNP 0009.scaffold00036 208931 1 T A scaffold7852 Both SNP 0009.scaffold00036 208949 1 A C scaffold7852 Both SNP 0009.scaffold00036 208965 1 G T scaffold7852 ScafM INDEL 0009.scaffold00036 209000 1 A . scaffold7852 ScafM INDEL 0009.scaffold00036 209831 2 CT .. scaffold7852 ScafM INDEL 0009.scaffold00036 209834 2 AC .. scaffold7852 Both SNP 0009.scaffold00036 210003 1 A T scaffold7852 ScafM INDEL 0009.scaffold00036 210168 1 . T scaffold7852 Both SNP 0009.scaffold00036 210376 1 G A scaffold7852 ScafM INDEL 0009.scaffold00036 210474 28 ............................ GCCTGTAGCCTGTAGCCTGTAGCCTGTA scaffold7852 ScafM SNP 0009.scaffold00036 210514 1 A G scaffold7852 ScafM SNP 0009.scaffold00036 210525 1 C T scaffold7852 ScafM SNP 0009.scaffold00036 210578 2 TT CA scaffold7852 ScafM SNP 0009.scaffold00036 210605 1 G A scaffold7852 ReadM SNP 0009.scaffold00036 210618 1 G T - Both SNP 0009.scaffold00036 210909 1 A G scaffold7852 ScafM INDEL 0009.scaffold00036 211086 1 . C scaffold7852 ReadM SNP 0009.scaffold00036 211165 1 A G - ReadM SNP 0009.scaffold00036 211178 1 G C - ReadM SNP 0009.scaffold00036 211554 1 A G - ReadM SNP 0009.scaffold00036 211581 1 A G - ScafM SNP 0009.scaffold00036 212943 1 G T scaffold7852 ScafM SNP 0009.scaffold00036 213026 1 T C scaffold7852 Both SNP 0009.scaffold00036 213785 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 213882 2 AT TC scaffold7852 ScafM INDEL 0009.scaffold00036 213910 1 . A scaffold7852 ScafM SNP 0009.scaffold00036 213927 1 C G scaffold7852 ScafM SNP 0009.scaffold00036 213934 1 T C scaffold7852 ScafM SNP 0009.scaffold00036 214022 1 T A scaffold7852 ReadM SNP 0009.scaffold00036 214078 1 G A - ReadM INDEL 0009.scaffold00036 214081 1 . G - ReadM SNP 0009.scaffold00036 214146 1 A G - ReadM SNP 0009.scaffold00036 214350 1 T C - ReadM SNP 0009.scaffold00036 214408 1 T C - ReadM SNP 0009.scaffold00036 214410 1 G A - ReadM SNP 0009.scaffold00036 214506 1 C T - ReadM SNP 0009.scaffold00036 214658 1 C A - ReadM SNP 0009.scaffold00036 214661 1 T C - ReadM SNP 0009.scaffold00036 214717 1 A T - ReadM SNP 0009.scaffold00036 214730 1 G C - ReadM SNP 0009.scaffold00036 214733 1 A T - ReadM SNP 0009.scaffold00036 214790 1 A G - ReadM SNP 0009.scaffold00036 214888 1 C T - ReadM SNP 0009.scaffold00036 214908 1 G A - ReadM SNP 0009.scaffold00036 215031 1 G C - ReadM SNP 0009.scaffold00036 215089 1 G A - ReadM SNP 0009.scaffold00036 215151 1 T C - ReadM SNP 0009.scaffold00036 215219 1 A C - ReadM SNP 0009.scaffold00036 215309 1 C T - ReadM SNP 0009.scaffold00036 215318 1 C T - ReadM INDEL 0009.scaffold00036 215435 1 T . - ReadM SNP 0009.scaffold00036 215523 1 A G - ReadM SNP 0009.scaffold00036 215692 1 G T - ReadM SNP 0009.scaffold00036 215846 1 G A - ReadM SNP 0009.scaffold00036 215942 1 A G - ReadM SNP 0009.scaffold00036 215948 1 G A - ReadM SNP 0009.scaffold00036 216060 1 C T - ReadM SNP 0009.scaffold00036 216174 1 C T - ReadM SNP 0009.scaffold00036 216651 1 A G - ReadM SNP 0009.scaffold00036 216710 1 A G - ReadM SNP 0009.scaffold00036 216784 1 C T - ReadM SNP 0009.scaffold00036 216839 1 A G - ReadM SNP 0009.scaffold00036 216893 1 C A - ReadM SNP 0009.scaffold00036 216914 1 T C - ReadM SNP 0009.scaffold00036 217269 1 C T - ReadM SNP 0009.scaffold00036 217551 1 T G - ReadM SNP 0009.scaffold00036 217654 1 A T - ReadM SNP 0009.scaffold00036 217678 1 C T - ReadM SNP 0009.scaffold00036 217724 1 A G - ReadM SNP 0009.scaffold00036 217901 1 C T - ReadM SNP 0009.scaffold00036 217999 1 T A - ReadM SNP 0009.scaffold00036 218014 1 G A - ReadM SNP 0009.scaffold00036 218048 1 T G - ReadM SNP 0009.scaffold00036 218091 1 T C - ReadM SNP 0009.scaffold00036 218184 1 C G - ReadM SNP 0009.scaffold00036 218234 1 G A - ReadM SNP 0009.scaffold00036 218256 1 A G - ReadM SNP 0009.scaffold00036 218267 1 G C - ReadM SNP 0009.scaffold00036 218292 1 C T - ReadM SNP 0009.scaffold00036 218316 1 A C - ReadM SNP 0009.scaffold00036 218490 1 A G - ReadM SNP 0009.scaffold00036 218605 1 G A - ReadM SNP 0009.scaffold00036 218624 1 A T - ReadM SNP 0009.scaffold00036 218664 1 C T - ReadM SNP 0009.scaffold00036 218721 1 C T - ReadM SNP 0009.scaffold00036 218775 1 T C - ReadM SNP 0009.scaffold00036 218811 1 G A - ReadM INDEL 0009.scaffold00036 218860 1 . G - ReadM SNP 0009.scaffold00036 218933 1 C T - ReadM SNP 0009.scaffold00036 218967 1 A G - ReadM SNP 0009.scaffold00036 219201 1 C T - ReadM SNP 0009.scaffold00036 219332 1 C G - ReadM SNP 0009.scaffold00036 219365 1 A G - ReadM SNP 0009.scaffold00036 219389 1 A G - ReadM SNP 0009.scaffold00036 219541 1 C T - ReadM SNP 0009.scaffold00036 219553 1 C A - ReadM SNP 0009.scaffold00036 219560 1 C A - ReadM SNP 0009.scaffold00036 219641 1 A G - ReadM SNP 0009.scaffold00036 219653 1 A T - ReadM SNP 0009.scaffold00036 219775 1 T C - ReadM SNP 0009.scaffold00036 219860 1 C A - ReadM SNP 0009.scaffold00036 220067 1 C G - ScafM SNP 0009.scaffold00036 220662 1 A T scaffold14203 ScafM SNP 0009.scaffold00036 220672 1 G A scaffold14203 ScafM SNP 0009.scaffold00036 220740 1 T C scaffold14203 ScafM SNP 0009.scaffold00036 220742 1 A G scaffold14203 ScafM SNP 0009.scaffold00036 220758 1 G A scaffold14203 ReadM SNP 0009.scaffold00036 220976 1 C T - ReadM SNP 0009.scaffold00036 220979 1 C A - ReadM SNP 0009.scaffold00036 221108 1 A G - ReadM SNP 0009.scaffold00036 221190 1 C T - ReadM SNP 0009.scaffold00036 221537 1 G A - ReadM SNP 0009.scaffold00036 221566 1 G C - ReadM INDEL 0009.scaffold00036 221583 1 . T - ReadM SNP 0009.scaffold00036 221702 1 G A - ReadM SNP 0009.scaffold00036 221826 1 G A - ReadM SNP 0009.scaffold00036 221916 1 T C - ReadM SNP 0009.scaffold00036 222005 1 C T - ReadM SNP 0009.scaffold00036 222050 1 A G - ReadM SNP 0009.scaffold00036 222082 1 C T - ReadM SNP 0009.scaffold00036 222186 1 G T - ReadM SNP 0009.scaffold00036 222233 1 C A - ReadM SNP 0009.scaffold00036 222267 1 A G - ReadM SNP 0009.scaffold00036 222285 1 A G - ReadM INDEL 0009.scaffold00036 222366 1 . T - ReadM SNP 0009.scaffold00036 222458 1 C A - ReadM SNP 0009.scaffold00036 222479 1 T A - ReadM SNP 0009.scaffold00036 222503 1 G T - ReadM SNP 0009.scaffold00036 222593 1 T C - ReadM SNP 0009.scaffold00036 222604 1 A C - ReadM SNP 0009.scaffold00036 222639 1 A G - ReadM SNP 0009.scaffold00036 222668 1 C T - ReadM SNP 0009.scaffold00036 222752 1 G T - ReadM SNP 0009.scaffold00036 222769 1 G A - ReadM SNP 0009.scaffold00036 222782 1 A G - ReadM SNP 0009.scaffold00036 222804 1 C T - ReadM SNP 0009.scaffold00036 222815 1 A G - ReadM SNP 0009.scaffold00036 222869 1 G A - ReadM SNP 0009.scaffold00036 222892 1 G A - ReadM SNP 0009.scaffold00036 222938 1 C T - ReadM SNP 0009.scaffold00036 222976 1 A G - ReadM SNP 0009.scaffold00036 223053 1 A G - ReadM SNP 0009.scaffold00036 223060 1 T C - ReadM SNP 0009.scaffold00036 223085 1 G A - ReadM SNP 0009.scaffold00036 223441 1 G A - ReadM SNP 0009.scaffold00036 223474 1 T C - ReadM SNP 0009.scaffold00036 223491 1 C A - ReadM SNP 0009.scaffold00036 223530 1 G C - ReadM SNP 0009.scaffold00036 223542 1 C G - ReadM SNP 0009.scaffold00036 223586 1 C T - ReadM SNP 0009.scaffold00036 223639 1 A G - ReadM SNP 0009.scaffold00036 223753 1 T C - ReadM SNP 0009.scaffold00036 223784 1 A G - ReadM SNP 0009.scaffold00036 223786 1 A G - ReadM SNP 0009.scaffold00036 223862 1 A G - ReadM SNP 0009.scaffold00036 223979 1 T A - ReadM SNP 0009.scaffold00036 224030 1 C T - ReadM SNP 0009.scaffold00036 224047 1 A G - ReadM SNP 0009.scaffold00036 224209 1 T C - ReadM SNP 0009.scaffold00036 224354 1 G A - ScafM SNP 0009.scaffold00036 225043 1 A C scaffold20511 ScafM SNP 0009.scaffold00036 225080 1 G T scaffold20511 ReadM SNP 0009.scaffold00036 225542 1 G A - ReadM SNP 0009.scaffold00036 225842 1 G A - ReadM SNP 0009.scaffold00036 225961 1 A G - ReadM SNP 0009.scaffold00036 226321 1 A G - ReadM SNP 0009.scaffold00036 226361 1 A T - ReadM SNP 0009.scaffold00036 230086 1 A G - ReadM SNP 0009.scaffold00036 230094 1 C G - ReadM SNP 0009.scaffold00036 230202 1 C A - ReadM SNP 0009.scaffold00036 230315 1 C T - ReadM SNP 0009.scaffold00036 230319 1 T C - ReadM SNP 0009.scaffold00036 230382 1 G C - ReadM SNP 0009.scaffold00036 230395 1 G C - ReadM SNP 0009.scaffold00036 230699 1 A T - ReadM SNP 0009.scaffold00036 230704 1 G A - ReadM SNP 0009.scaffold00036 230791 1 A C - ReadM SNP 0009.scaffold00036 230795 1 A G - ReadM SNP 0009.scaffold00036 230930 1 G C - ReadM SNP 0009.scaffold00036 230961 1 T C - ReadM SNP 0009.scaffold00036 230994 1 A G - ReadM SNP 0009.scaffold00036 231114 1 A G - ReadM SNP 0009.scaffold00036 231133 1 T C - ReadM SNP 0009.scaffold00036 231199 1 C T - ReadM SNP 0009.scaffold00036 231211 1 T C - ReadM SNP 0009.scaffold00036 231233 1 C T - ReadM SNP 0009.scaffold00036 231241 1 A G - ReadM SNP 0009.scaffold00036 231260 1 A G - ReadM SNP 0009.scaffold00036 231410 1 C A - ReadM SNP 0009.scaffold00036 231505 1 A C - ReadM SNP 0009.scaffold00036 231615 1 T C - ReadM SNP 0009.scaffold00036 231815 1 T A - ReadM SNP 0009.scaffold00036 231911 1 T A - ReadM SNP 0009.scaffold00036 231921 1 T C - ReadM SNP 0009.scaffold00036 231962 1 A G - ReadM SNP 0009.scaffold00036 232006 1 T C - ReadM SNP 0009.scaffold00036 232081 1 A G - ReadM SNP 0009.scaffold00036 232144 1 C T - ReadM SNP 0009.scaffold00036 232274 1 G T - ReadM SNP 0009.scaffold00036 232301 1 G A - ReadM SNP 0009.scaffold00036 232330 1 T C - ReadM SNP 0009.scaffold00036 232382 1 G C - ReadM SNP 0009.scaffold00036 232499 1 G A - ReadM SNP 0009.scaffold00036 232590 1 A G - ReadM SNP 0009.scaffold00036 232684 1 T C - ReadM SNP 0009.scaffold00036 232695 1 A G - ReadM SNP 0009.scaffold00036 232747 1 T G - ReadM SNP 0009.scaffold00036 232774 1 G A - ReadM SNP 0009.scaffold00036 232826 1 C T - ReadM SNP 0009.scaffold00036 232847 1 T A - ReadM SNP 0009.scaffold00036 232898 1 T A - ReadM INDEL 0009.scaffold00036 232925 1 . A - ReadM SNP 0009.scaffold00036 232986 1 G A - ReadM SNP 0009.scaffold00036 232990 1 C A - ReadM SNP 0009.scaffold00036 232998 1 T C - ReadM SNP 0009.scaffold00036 233050 1 C A - ReadM SNP 0009.scaffold00036 233145 1 T C - ReadM SNP 0009.scaffold00036 233193 1 T C - ReadM SNP 0009.scaffold00036 233215 1 T A - ReadM SNP 0009.scaffold00036 233221 1 C G - ReadM SNP 0009.scaffold00036 233282 1 G A - ReadM SNP 0009.scaffold00036 233332 1 C A - Both SNP 0009.scaffold00036 233462 1 A G scaffold23121 Both SNP 0009.scaffold00036 233553 1 T C scaffold23121 Both SNP 0009.scaffold00036 233828 1 A T scaffold23121 Both SNP 0009.scaffold00036 233944 1 T C scaffold23121 ReadM SNP 0009.scaffold00036 233997 1 G T - ReadM SNP 0009.scaffold00036 234174 1 G T - ReadM SNP 0009.scaffold00036 234196 1 T C - ReadM SNP 0009.scaffold00036 234294 1 G T - Both SNP 0009.scaffold00036 234405 1 A G scaffold23121 Both SNP 0009.scaffold00036 234457 1 A C scaffold23121 Both SNP 0009.scaffold00036 234474 1 G C scaffold23121 Both SNP 0009.scaffold00036 234477 1 T G scaffold23121 Both SNP 0009.scaffold00036 234518 1 T A scaffold23121 ReadM SNP 0009.scaffold00036 234630 1 G A - ReadM SNP 0009.scaffold00036 234677 1 T G - Both SNP 0009.scaffold00036 234783 1 T A scaffold23121 ScafM SNP 0009.scaffold00036 234843 2 TA AT scaffold23121 ReadM SNP 0009.scaffold00036 235102 1 T C - ReadM SNP 0009.scaffold00036 235298 1 T A - ReadM SNP 0009.scaffold00036 235311 1 C T - ReadM SNP 0009.scaffold00036 235350 1 T C - ReadM SNP 0009.scaffold00036 235469 1 G A - ReadM SNP 0009.scaffold00036 235675 1 T G - ReadM SNP 0009.scaffold00036 235679 1 A C - ScafM SNP 0009.scaffold00036 235708 2 CA GT scaffold23121 ScafM SNP 0009.scaffold00036 235747 1 A C scaffold23121 ScafM SNP 0009.scaffold00036 235754 1 C G scaffold23121 ScafM SNP 0009.scaffold00036 235768 1 A T scaffold23121 ScafM SNP 0009.scaffold00036 235790 1 A G scaffold23121 ScafM SNP 0009.scaffold00036 235802 1 T A scaffold23121 Both SNP 0009.scaffold00036 235813 1 A T scaffold23121 Both SNP 0009.scaffold00036 235834 1 C T scaffold23121 ScafM SNP 0009.scaffold00036 235953 1 A T scaffold23121 ReadM SNP 0009.scaffold00036 236121 1 A G - ReadM SNP 0009.scaffold00036 236149 1 C A - ReadM SNP 0009.scaffold00036 236293 1 T G - ReadM INDEL 0009.scaffold00036 236569 1 . C - ReadM SNP 0009.scaffold00036 236672 1 G T - ReadM SNP 0009.scaffold00036 237283 1 G A - ReadM SNP 0009.scaffold00036 237656 1 A G - ReadM SNP 0009.scaffold00036 238647 1 C T - ReadM SNP 0009.scaffold00036 238713 1 G A - ReadM SNP 0009.scaffold00036 238736 1 G A - ReadM SNP 0009.scaffold00036 238772 1 A G - ReadM SNP 0009.scaffold00036 238815 1 C T - ReadM SNP 0009.scaffold00036 238825 1 A C - ReadM SNP 0009.scaffold00036 238867 1 T G - ReadM SNP 0009.scaffold00036 238944 1 A G - ReadM SNP 0009.scaffold00036 239002 1 A G - ReadM SNP 0009.scaffold00036 239068 1 C T - ReadM INDEL 0009.scaffold00036 239117 2 TT .. - ReadM SNP 0009.scaffold00036 239233 1 T G - ReadM SNP 0009.scaffold00036 239499 1 T G - ReadM SNP 0009.scaffold00036 239505 1 A C - ReadM SNP 0009.scaffold00036 240580 1 C T - ReadM SNP 0009.scaffold00036 240597 1 A G - ReadM SNP 0009.scaffold00036 240622 1 T C - ReadM SNP 0009.scaffold00036 240675 1 G A - ReadM SNP 0009.scaffold00036 240719 1 C T - ReadM SNP 0009.scaffold00036 240754 1 T C - ReadM SNP 0009.scaffold00036 240821 1 G T - ReadM SNP 0009.scaffold00036 240860 1 T C - ReadM SNP 0009.scaffold00036 240893 1 T G - ReadM SNP 0009.scaffold00036 241060 1 T C - ReadM SNP 0009.scaffold00036 241127 1 G A - ReadM SNP 0009.scaffold00036 241213 1 A G - ReadM SNP 0009.scaffold00036 241315 1 A G - ReadM SNP 0009.scaffold00036 241335 1 A T - ReadM SNP 0009.scaffold00036 241396 1 C T - ReadM SNP 0009.scaffold00036 241477 1 C T - ReadM SNP 0009.scaffold00036 241549 1 C A - ReadM SNP 0009.scaffold00036 241570 1 T C - ReadM SNP 0009.scaffold00036 242357 1 C A - ReadM SNP 0009.scaffold00036 242523 1 A T - ReadM SNP 0009.scaffold00036 242779 1 T C - ReadM SNP 0009.scaffold00036 242855 1 G A - ReadM SNP 0009.scaffold00036 242944 1 T C - ReadM SNP 0009.scaffold00036 243073 1 A G - ReadM SNP 0009.scaffold00036 243088 1 A T - ReadM SNP 0009.scaffold00036 243154 1 A G - ReadM SNP 0009.scaffold00036 244424 1 T C - ReadM SNP 0009.scaffold00036 244693 1 G A - ReadM SNP 0009.scaffold00036 244784 1 A C - ReadM SNP 0009.scaffold00036 244941 1 C A - ReadM SNP 0009.scaffold00036 244970 1 A G - ReadM SNP 0009.scaffold00036 244977 1 T C - ReadM SNP 0009.scaffold00036 245118 1 A G - ReadM SNP 0009.scaffold00036 245126 1 A G - ReadM SNP 0009.scaffold00036 245250 1 T C - ReadM INDEL 0009.scaffold00036 245322 1 . C - ReadM SNP 0009.scaffold00036 245435 1 A C - ReadM SNP 0009.scaffold00036 245469 1 G A - ReadM SNP 0009.scaffold00036 245581 1 C T - ReadM SNP 0009.scaffold00036 245599 1 G A - ReadM SNP 0009.scaffold00036 245616 1 C T - ReadM SNP 0009.scaffold00036 245673 1 C T - ReadM SNP 0009.scaffold00036 245683 1 T G - ReadM SNP 0009.scaffold00036 245945 1 C T - ReadM SNP 0009.scaffold00036 246313 1 T C - ReadM SNP 0009.scaffold00036 246487 1 G A - ReadM SNP 0009.scaffold00036 246504 1 C A - ReadM SNP 0009.scaffold00036 246544 1 C T - ReadM SNP 0009.scaffold00036 246701 1 C G - ReadM SNP 0009.scaffold00036 246745 1 A G - ReadM SNP 0009.scaffold00036 246779 1 A C - ReadM SNP 0009.scaffold00036 246813 1 T A - ReadM SNP 0009.scaffold00036 246836 1 T C - ReadM SNP 0009.scaffold00036 247120 1 C T - ReadM SNP 0009.scaffold00036 247224 1 G T - ReadM SNP 0009.scaffold00036 247321 1 A T - ReadM SNP 0009.scaffold00036 247414 1 G T - ReadM INDEL 0009.scaffold00036 247479 1 T . - ReadM SNP 0009.scaffold00036 247682 1 G C - ReadM SNP 0009.scaffold00036 247785 1 A G - ReadM SNP 0009.scaffold00036 247789 1 G A - ReadM SNP 0009.scaffold00036 247824 1 G C - ReadM SNP 0009.scaffold00036 247832 1 A G - ReadM SNP 0009.scaffold00036 247943 1 T G - ReadM SNP 0009.scaffold00036 248287 1 A G - ReadM SNP 0009.scaffold00036 248309 1 G A - ReadM SNP 0009.scaffold00036 248315 1 G A - ReadM SNP 0009.scaffold00036 248391 1 A G - ReadM SNP 0009.scaffold00036 248463 1 T G - Both SNP 0009.scaffold00036 248522 1 C T scaffold625 Both SNP 0009.scaffold00036 248740 1 C T scaffold625 ReadM SNP 0009.scaffold00036 248803 1 T G - ReadM SNP 0009.scaffold00036 248988 1 C A - ReadM SNP 0009.scaffold00036 249120 1 A T - ReadM SNP 0009.scaffold00036 249220 1 A G - ReadM SNP 0009.scaffold00036 249223 1 C T - ReadM SNP 0009.scaffold00036 249341 1 A G - ReadM SNP 0009.scaffold00036 249454 1 G A - ReadM SNP 0009.scaffold00036 249476 1 G T - Both SNP 0009.scaffold00036 249848 1 C G scaffold625 ReadM SNP 0009.scaffold00036 249972 1 C T - ReadM SNP 0009.scaffold00036 250078 1 C T - ReadM SNP 0009.scaffold00036 250094 1 T G - ReadM SNP 0009.scaffold00036 250138 1 C T - ReadM SNP 0009.scaffold00036 250181 1 T C - ReadM SNP 0009.scaffold00036 250191 1 A G - ReadM SNP 0009.scaffold00036 250236 1 T C - ReadM SNP 0009.scaffold00036 250314 1 T C - ReadM SNP 0009.scaffold00036 250423 1 G T - ReadM SNP 0009.scaffold00036 250456 1 C G - ReadM SNP 0009.scaffold00036 250472 1 T G - ReadM SNP 0009.scaffold00036 250493 1 A G - ReadM SNP 0009.scaffold00036 250508 1 T G - ReadM SNP 0009.scaffold00036 250572 2 AC GT - ReadM SNP 0009.scaffold00036 250618 1 C G - ReadM SNP 0009.scaffold00036 250622 1 A G - ReadM SNP 0009.scaffold00036 250751 1 G C - ReadM SNP 0009.scaffold00036 250798 1 G A - ReadM SNP 0009.scaffold00036 251181 1 A T - ReadM SNP 0009.scaffold00036 251224 1 T C - ReadM SNP 0009.scaffold00036 251241 1 A C - ReadM SNP 0009.scaffold00036 251284 1 G A - ReadM SNP 0009.scaffold00036 251350 1 T C - ReadM SNP 0009.scaffold00036 251414 1 C G - ReadM SNP 0009.scaffold00036 251440 1 T C - ReadM SNP 0009.scaffold00036 251458 1 C G - ReadM SNP 0009.scaffold00036 251511 1 G A - ReadM SNP 0009.scaffold00036 251572 1 C G - ReadM SNP 0009.scaffold00036 251600 1 A G - ReadM SNP 0009.scaffold00036 251612 1 G A - ReadM SNP 0009.scaffold00036 251684 1 A G - ReadM SNP 0009.scaffold00036 251758 1 C G - ReadM SNP 0009.scaffold00036 251992 1 G A - ReadM SNP 0009.scaffold00036 252119 1 G T - ReadM SNP 0009.scaffold00036 252132 1 G A - ReadM SNP 0009.scaffold00036 252144 1 A C - ReadM SNP 0009.scaffold00036 252213 1 A T - ReadM SNP 0009.scaffold00036 252356 1 T C - ReadM SNP 0009.scaffold00036 252606 1 G A - ReadM SNP 0009.scaffold00036 252609 1 A G - ReadM SNP 0009.scaffold00036 252793 1 G A - ReadM SNP 0009.scaffold00036 252856 1 C A - ReadM SNP 0009.scaffold00036 252903 1 A G - ReadM SNP 0009.scaffold00036 252965 1 A G - ReadM SNP 0009.scaffold00036 253104 1 T C - ReadM SNP 0009.scaffold00036 253357 1 A T - ReadM SNP 0009.scaffold00036 253360 1 G A - ReadM INDEL 0009.scaffold00036 253408 1 . G - ReadM SNP 0009.scaffold00036 253432 1 A T - ReadM SNP 0009.scaffold00036 253459 1 G A - ReadM SNP 0009.scaffold00036 253795 1 A G - ReadM SNP 0009.scaffold00036 253809 1 A G - ReadM SNP 0009.scaffold00036 253869 1 A G - ReadM SNP 0009.scaffold00036 253909 1 G A - ReadM SNP 0009.scaffold00036 253945 1 T A - ReadM INDEL 0009.scaffold00036 253953 1 C . - ReadM SNP 0009.scaffold00036 253972 1 G T - ReadM SNP 0009.scaffold00036 254057 1 T A - ReadM SNP 0009.scaffold00036 254222 1 G T - ReadM SNP 0009.scaffold00036 254247 1 C T - ReadM SNP 0009.scaffold00036 254317 1 A G - ReadM SNP 0009.scaffold00036 254322 1 G C - ReadM SNP 0009.scaffold00036 254549 1 T G - ReadM SNP 0009.scaffold00036 254612 1 A G - ReadM SNP 0009.scaffold00036 254809 1 G A - ReadM SNP 0009.scaffold00036 254882 1 C T - ReadM SNP 0009.scaffold00036 254958 1 C T - ReadM SNP 0009.scaffold00036 255335 1 G A - ReadM SNP 0009.scaffold00036 255415 1 C A - ReadM SNP 0009.scaffold00036 255457 1 C T - ReadM SNP 0009.scaffold00036 255547 1 G C - ReadM SNP 0009.scaffold00036 255743 1 C A - ReadM SNP 0009.scaffold00036 255888 1 T A - ReadM SNP 0009.scaffold00036 255955 1 A G - ReadM SNP 0009.scaffold00036 256129 1 C G - ReadM SNP 0009.scaffold00036 256133 1 T C - Both SNP 0009.scaffold00036 256501 1 C T scaffold625 ReadM SNP 0009.scaffold00036 256572 1 T C - ReadM SNP 0009.scaffold00036 256758 1 C T - ReadM SNP 0009.scaffold00036 256952 1 A G - ReadM SNP 0009.scaffold00036 256982 1 G A - ReadM SNP 0009.scaffold00036 257002 1 G T - ReadM SNP 0009.scaffold00036 257067 1 C T - Both SNP 0009.scaffold00036 257119 1 G T scaffold625 Both SNP 0009.scaffold00036 257123 1 A G scaffold625 Both SNP 0009.scaffold00036 257272 1 C T scaffold625 Both SNP 0009.scaffold00036 257279 1 C T scaffold625 ReadM SNP 0009.scaffold00036 257343 1 T G - ReadM SNP 0009.scaffold00036 257423 1 A T - ReadM SNP 0009.scaffold00036 257535 1 T C - ScafM SNP 0009.scaffold00036 257833 1 T C scaffold625 ScafM SNP 0009.scaffold00036 257889 2 GG AA scaffold625 ScafM SNP 0009.scaffold00036 258087 1 C A scaffold625 ScafM SNP 0009.scaffold00036 258139 1 A G scaffold625 ScafM SNP 0009.scaffold00036 258256 1 T G scaffold625 ReadM SNP 0009.scaffold00036 258734 1 T C - ScafM INDEL 0009.scaffold00036 261539 1 . A scaffold27423 ScafM SNP 0009.scaffold00036 261547 1 G A scaffold27423 ScafM INDEL 0009.scaffold00036 261552 1 T . scaffold27423 ScafM SNP 0009.scaffold00036 261591 1 A G scaffold27423 ScafM SNP 0009.scaffold00036 261598 2 CT AC scaffold27423 ScafM SNP 0009.scaffold00036 261619 1 T G scaffold27423 ScafM SNP 0009.scaffold00036 261665 1 T C scaffold27423 ScafM SNP 0009.scaffold00036 261670 1 T A scaffold27423 ScafM SNP 0009.scaffold00036 261672 1 T A scaffold27423 ScafM INDEL 0009.scaffold00036 261679 13 GATGTGAACACGT ............. scaffold27423 ScafM SNP 0009.scaffold00036 261737 1 G A scaffold27423 ScafM INDEL 0009.scaffold00036 261820 1 T . scaffold625 ScafM SNP 0009.scaffold00036 261824 1 T A scaffold625 ScafM INDEL 0009.scaffold00036 261856 2 .. TT scaffold625 ScafM INDEL 0009.scaffold00036 261988 5 ..... AAGTG scaffold625 ReadM SNP 0009.scaffold00036 262936 1 G A - ReadM SNP 0009.scaffold00036 263138 1 C T - ReadM SNP 0009.scaffold00036 263168 1 T G - Both SNP 0009.scaffold00036 263458 1 C T scaffold625 ReadM SNP 0009.scaffold00036 263500 1 C A - ReadM SNP 0009.scaffold00036 263514 1 A C - Both SNP 0009.scaffold00036 263651 1 G T scaffold625 Both SNP 0009.scaffold00036 263785 1 G A scaffold625 Both SNP 0009.scaffold00036 263903 1 A G scaffold625 Both SNP 0009.scaffold00036 263981 1 T G scaffold625 Both SNP 0009.scaffold00036 264109 1 T C scaffold625 Both SNP 0009.scaffold00036 264167 1 T C scaffold625 Both SNP 0009.scaffold00036 264203 1 T C scaffold625 Both INDEL 0009.scaffold00036 264289 2 CA .. scaffold625 ReadM SNP 0009.scaffold00036 264573 1 A G - ReadM SNP 0009.scaffold00036 264663 1 A G - ReadM SNP 0009.scaffold00036 264743 1 C T - ReadM SNP 0009.scaffold00036 264749 1 T G - ReadM SNP 0009.scaffold00036 264788 1 G T - Both SNP 0009.scaffold00036 264846 1 A C scaffold625 Both SNP 0009.scaffold00036 264894 1 C A scaffold625 Both SNP 0009.scaffold00036 265002 1 A G scaffold625 ScafM INDEL 0009.scaffold00036 265013 1 . A scaffold625 ReadM INDEL 0009.scaffold00036 265029 1 . C - Both SNP 0009.scaffold00036 265072 1 A G scaffold625 ScafM SNP 0009.scaffold00036 265222 1 C T scaffold625 ScafM SNP 0009.scaffold00036 265232 1 T C scaffold625 ScafM SNP 0009.scaffold00036 265238 1 A G scaffold625 ScafM SNP 0009.scaffold00036 265260 1 A G scaffold625 ScafM INDEL 0009.scaffold00036 265275 3 ACG .GT scaffold625 ScafM SNP 0009.scaffold00036 265282 2 TG AA scaffold625 ScafM SNP 0009.scaffold00036 265285 2 TG AA scaffold625 ScafM INDEL 0009.scaffold00036 265287 2 .G TC scaffold625 ReadM SNP 0009.scaffold00036 266120 1 G T - ReadM SNP 0009.scaffold00036 266124 1 G A - ReadM SNP 0009.scaffold00036 266181 1 T C - ReadM SNP 0009.scaffold00036 266313 1 T C - ReadM SNP 0009.scaffold00036 266410 1 T A - ReadM SNP 0009.scaffold00036 266609 1 A G - ReadM SNP 0009.scaffold00036 266791 1 C T - ReadM SNP 0009.scaffold00036 267022 1 G T - ReadM SNP 0009.scaffold00036 267192 1 T C - ScafM SNP 0009.scaffold00036 267398 3 TTT AAA scaffold625 Both SNP 0009.scaffold00036 267496 1 G T scaffold625 Both SNP 0009.scaffold00036 267572 1 T C scaffold625 Both SNP 0009.scaffold00036 267607 1 T A scaffold625 Both SNP 0009.scaffold00036 267704 1 G A scaffold625 ReadM SNP 0009.scaffold00036 267806 1 A G - ReadM SNP 0009.scaffold00036 267880 1 G A - ReadM SNP 0009.scaffold00036 267952 1 T G - ReadM SNP 0009.scaffold00036 268065 1 G A - ReadM SNP 0009.scaffold00036 268167 1 A G - ReadM SNP 0009.scaffold00036 268271 1 A G - ReadM SNP 0009.scaffold00036 268392 1 G A - ReadM SNP 0009.scaffold00036 268408 1 T C - ReadM SNP 0009.scaffold00036 268813 1 C T - ReadM SNP 0009.scaffold00036 268834 1 A T - ReadM SNP 0009.scaffold00036 268853 1 C T - ReadM SNP 0009.scaffold00036 268970 1 C T - ReadM SNP 0009.scaffold00036 269087 1 A G - Both SNP 0009.scaffold00036 269345 1 G T scaffold625 ScafM SNP 0009.scaffold00036 269425 1 G A scaffold625 ScafM SNP 0009.scaffold00036 269511 1 G A scaffold625 ScafM INDEL 0009.scaffold00036 269526 7 ....... TTCTTGC scaffold625 ScafM SNP 0009.scaffold00036 269689 1 G A scaffold625 ScafM SNP 0009.scaffold00036 269860 1 C T scaffold625 ReadM SNP 0009.scaffold00036 270481 1 A G - ReadM SNP 0009.scaffold00036 270665 1 C A - ReadM INDEL 0009.scaffold00036 270691 1 A . - Both INDEL 0009.scaffold00036 270787 2 AT .. scaffold625 ScafM SNP 0009.scaffold00036 270836 1 C G scaffold625 ScafM SNP 0009.scaffold00036 270885 1 C T scaffold625 Both SNP 0009.scaffold00036 270971 1 C T scaffold625 Both SNP 0009.scaffold00036 270998 1 A G scaffold625 Both SNP 0009.scaffold00036 271162 1 A T scaffold625 Both SNP 0009.scaffold00036 271342 1 C A scaffold625 Both SNP 0009.scaffold00036 271425 1 A G scaffold625 Both SNP 0009.scaffold00036 271438 1 C T scaffold625 Both SNP 0009.scaffold00036 271471 1 A C scaffold625 Both SNP 0009.scaffold00036 271474 1 G A scaffold625 Both SNP 0009.scaffold00036 271598 1 C T scaffold625 Both SNP 0009.scaffold00036 271607 1 T A scaffold625 Both SNP 0009.scaffold00036 271740 1 C T scaffold625 Both SNP 0009.scaffold00036 271844 1 G A scaffold625 Both SNP 0009.scaffold00036 271915 1 T C scaffold625 Both SNP 0009.scaffold00036 271978 1 G A scaffold625 ScafM SNP 0009.scaffold00036 272221 1 T A scaffold625 Both SNP 0009.scaffold00036 272251 1 C G scaffold625 Both SNP 0009.scaffold00036 272340 1 A G scaffold625 Both SNP 0009.scaffold00036 272476 1 T C scaffold625 Both SNP 0009.scaffold00036 272499 1 T C scaffold625 ReadM SNP 0009.scaffold00036 272585 1 C G - ScafM INDEL 0009.scaffold00036 272782 42 TAATATTTTAATTTTGGTACCTTTTCTCATTTCCAACTAAAT .......................................... scaffold625 ScafM INDEL 0009.scaffold00036 272870 1 . T scaffold625 ScafM INDEL 0009.scaffold00036 272922 2 .. CT scaffold625 Both SNP 0009.scaffold00036 273014 1 C A scaffold625 Both SNP 0009.scaffold00036 273049 1 T C scaffold625 Both INDEL 0009.scaffold00036 273266 1 G . scaffold625 ScafM SNP 0009.scaffold00036 273329 1 A C scaffold625 ScafM SNP 0009.scaffold00036 273331 1 C T scaffold625 ReadM SNP 0009.scaffold00036 273407 1 A G - Both SNP 0009.scaffold00036 273477 1 A G scaffold625 ReadM SNP 0009.scaffold00036 273550 1 A G - ReadM SNP 0009.scaffold00036 273581 1 A T - Both SNP 0009.scaffold00036 273667 1 T C scaffold625 ReadM SNP 0009.scaffold00036 274333 1 T C - ReadM SNP 0009.scaffold00036 274483 1 A G - Both SNP 0009.scaffold00036 274527 1 A G scaffold625 Both SNP 0009.scaffold00036 274541 1 T C scaffold625 Both SNP 0009.scaffold00036 274729 1 C A scaffold625 ReadM SNP 0009.scaffold00036 274792 1 T C - ReadM SNP 0009.scaffold00036 274808 1 C T - ReadM SNP 0009.scaffold00036 275137 1 C T - Both SNP 0009.scaffold00036 275312 1 T C scaffold625 Both SNP 0009.scaffold00036 275337 1 T G scaffold625 Both SNP 0009.scaffold00036 275419 1 T C scaffold625 Both SNP 0009.scaffold00036 275425 1 C T scaffold625 ReadM SNP 0009.scaffold00036 275537 1 T A - Both SNP 0009.scaffold00036 275710 1 A G scaffold625 ReadM SNP 0009.scaffold00036 275765 1 G A - ScafM SNP 0009.scaffold00036 275963 2 GA AG scaffold625 ScafM INDEL 0009.scaffold00036 276099 42 TCCCTCTGTTTTTTTTTTATCTTTCTCACTTTTCAGAGGGAG .......................................... scaffold625 ScafM SNP 0009.scaffold00036 276177 1 C G scaffold625 ReadM SNP 0009.scaffold00036 277421 1 G A - ScafM SNP 0009.scaffold00036 277717 1 G C scaffold625 ScafM SNP 0009.scaffold00036 277980 1 A T scaffold625 Both INDEL 0009.scaffold00036 278060 1 . T scaffold625 Both SNP 0009.scaffold00036 278089 1 T C scaffold625 ScafM INDEL 0009.scaffold00036 278114 2 .. TT scaffold625 ScafM SNP 0009.scaffold00036 278120 1 G A scaffold625 ScafM INDEL 0009.scaffold00036 278133 4 .... TATT scaffold625 Both SNP 0009.scaffold00036 278173 1 G A scaffold625 Both INDEL 0009.scaffold00036 278375 1 . A scaffold625 Both SNP 0009.scaffold00036 278395 1 T G scaffold625 ScafM SNP 0009.scaffold00036 279108 1 A G scaffold625 ReadM SNP 0009.scaffold00036 279580 1 C T - ReadM SNP 0009.scaffold00036 279658 1 C T - ReadM SNP 0009.scaffold00036 279692 1 T A - ReadM SNP 0009.scaffold00036 279763 1 A G - ReadM SNP 0009.scaffold00036 279805 1 A C - ReadM SNP 0009.scaffold00036 279809 1 A G - ReadM SNP 0009.scaffold00036 280075 1 G C - ReadM SNP 0009.scaffold00036 280215 1 T C - ReadM SNP 0009.scaffold00036 280513 1 C T - ReadM SNP 0009.scaffold00036 280627 1 T C - ReadM SNP 0009.scaffold00036 280832 1 G A - ReadM SNP 0009.scaffold00036 280867 1 G A - ReadM SNP 0009.scaffold00036 281099 1 G T - ReadM SNP 0009.scaffold00036 281213 1 A G - ReadM SNP 0009.scaffold00036 281242 1 G C - ReadM SNP 0009.scaffold00036 281468 1 G A - ReadM SNP 0009.scaffold00036 281576 1 A G - ReadM SNP 0009.scaffold00036 281597 1 G T - ReadM SNP 0009.scaffold00036 281642 1 C T - ReadM SNP 0009.scaffold00036 281804 1 A G - ReadM SNP 0009.scaffold00036 281822 1 G T - ReadM SNP 0009.scaffold00036 282239 1 A T - ReadM SNP 0009.scaffold00036 282275 1 G A - ReadM SNP 0009.scaffold00036 282342 1 A T - ReadM SNP 0009.scaffold00036 282431 1 G A - ReadM SNP 0009.scaffold00036 282500 1 C T - ReadM SNP 0009.scaffold00036 282750 1 G A - ReadM SNP 0009.scaffold00036 283118 1 C G - ReadM SNP 0009.scaffold00036 283247 1 G A - ReadM SNP 0009.scaffold00036 283306 1 A T - ReadM SNP 0009.scaffold00036 283335 1 C T - ReadM SNP 0009.scaffold00036 283488 1 C T - ReadM SNP 0009.scaffold00036 283518 1 A G - ReadM INDEL 0009.scaffold00036 283622 1 A . - ReadM SNP 0009.scaffold00036 283660 1 T A - ReadM SNP 0009.scaffold00036 283667 1 T G - ReadM SNP 0009.scaffold00036 283774 1 G T - ReadM SNP 0009.scaffold00036 284053 1 T A - ReadM SNP 0009.scaffold00036 284056 1 T C - ReadM SNP 0009.scaffold00036 284133 1 C T - ReadM SNP 0009.scaffold00036 284170 1 T A - ReadM SNP 0009.scaffold00036 284185 1 C T - ScafM SNP 0009.scaffold00036 284207 1 C G scaffold625 Both SNP 0009.scaffold00036 284233 1 T A scaffold625 ReadM SNP 0009.scaffold00036 284656 1 C T - ReadM SNP 0009.scaffold00036 285123 1 G C - ScafM SNP 0009.scaffold00036 285484 1 A T scaffold625 ScafM SNP 0009.scaffold00036 285544 1 G A scaffold625 ScafM SNP 0009.scaffold00036 285584 1 T G scaffold625 ScafM SNP 0009.scaffold00036 285615 1 T C scaffold625 Both SNP 0009.scaffold00036 285698 1 T C scaffold625 ReadM SNP 0009.scaffold00036 286148 1 C T - ScafM SNP 0009.scaffold00036 286339 1 T G scaffold16921 ReadM SNP 0009.scaffold00036 287362 1 C T - ReadM SNP 0009.scaffold00036 287412 1 T C - ScafM SNP 0009.scaffold00036 288076 1 T C scaffold9603 ScafM SNP 0009.scaffold00036 288089 1 T A scaffold9603 ScafM SNP 0009.scaffold00036 288104 1 T G scaffold9603 ScafM SNP 0009.scaffold00036 288115 1 A C scaffold9603 ScafM SNP 0009.scaffold00036 288139 1 G A scaffold9603 ScafM SNP 0009.scaffold00036 288244 1 A G scaffold9603 ScafM SNP 0009.scaffold00036 288312 1 G A scaffold9603 ScafM SNP 0009.scaffold00036 288359 1 C T scaffold9603 ScafM SNP 0009.scaffold00036 288363 1 G A scaffold9603 ScafM SNP 0009.scaffold00036 288381 1 G A scaffold9603 ScafM SNP 0009.scaffold00036 288444 1 T A scaffold9603 ScafM SNP 0009.scaffold00036 288464 1 T G scaffold9603 ReadM SNP 0009.scaffold00036 288822 1 A G - ReadM INDEL 0009.scaffold00036 288847 1 A . - ReadM SNP 0009.scaffold00036 288864 1 G A - ReadM SNP 0009.scaffold00036 288905 1 C T - ReadM SNP 0009.scaffold00036 289020 1 A G - Both SNP 0009.scaffold00036 289167 1 G C scaffold625 Both SNP 0009.scaffold00036 289169 1 G A scaffold625 ScafM INDEL 0009.scaffold00036 289239 1 . T scaffold625 Both SNP 0009.scaffold00036 289351 1 A C scaffold625 Both SNP 0009.scaffold00036 289425 1 A G scaffold625 Both SNP 0009.scaffold00036 289537 1 G C scaffold625 ScafM SNP 0009.scaffold00036 289569 2 AC TG scaffold625 ScafM INDEL 0009.scaffold00036 289629 3 ... TCT scaffold625 ScafM SNP 0009.scaffold00036 289639 1 C G scaffold625 ScafM INDEL 0009.scaffold00036 289642 2 .. AG scaffold625 ScafM SNP 0009.scaffold00036 289658 1 A G scaffold625 ScafM SNP 0009.scaffold00036 289660 1 G T scaffold625 ScafM SNP 0009.scaffold00036 289666 1 C T scaffold625 ScafM SNP 0009.scaffold00036 289675 3 TTG AAA scaffold625 ScafM SNP 0009.scaffold00036 289724 1 T C scaffold625 ScafM SNP 0009.scaffold00036 289731 1 G C scaffold625 ScafM SNP 0009.scaffold00036 289747 1 A T scaffold625 ScafM SNP 0009.scaffold00036 289755 1 T G scaffold625 ScafM SNP 0009.scaffold00036 289773 1 G T scaffold625 ScafM SNP 0009.scaffold00036 289823 1 T C scaffold625 ScafM SNP 0009.scaffold00036 289851 1 C T scaffold625 ScafM SNP 0009.scaffold00036 289873 1 A C scaffold625 ScafM SNP 0009.scaffold00036 289878 1 C T scaffold625 ScafM SNP 0009.scaffold00036 289899 1 A G scaffold625 ScafM SNP 0009.scaffold00036 289908 1 G A scaffold625 ScafM SNP 0009.scaffold00036 289915 1 A G scaffold625 ScafM SNP 0009.scaffold00036 289950 1 G C scaffold625 ScafM SNP 0009.scaffold00036 289980 1 G A scaffold625 ScafM SNP 0009.scaffold00036 290074 1 T C scaffold625 ScafM SNP 0009.scaffold00036 290141 1 T A scaffold625 ScafM SNP 0009.scaffold00036 290143 1 T G scaffold625 ScafM SNP 0009.scaffold00036 290211 1 G A scaffold625 ScafM SNP 0009.scaffold00036 290214 1 C T scaffold625 ScafM INDEL 0009.scaffold00036 290222 2 .. TA scaffold625 ScafM SNP 0009.scaffold00036 290238 1 A G scaffold625 ScafM SNP 0009.scaffold00036 290244 1 A T scaffold625 ScafM SNP 0009.scaffold00036 290281 1 A T scaffold625 ScafM SNP 0009.scaffold00036 290283 1 C A scaffold625 ScafM SNP 0009.scaffold00036 290289 1 A C scaffold625 ScafM SNP 0009.scaffold00036 290297 1 T C scaffold625 ScafM SNP 0009.scaffold00036 290313 1 T C scaffold625 ScafM SNP 0009.scaffold00036 290514 1 C T scaffold625 ScafM SNP 0009.scaffold00036 290516 1 A C scaffold625 ScafM SNP 0009.scaffold00036 290534 1 A G scaffold625 ScafM INDEL 0009.scaffold00036 290559 5 ACAAA ..... scaffold625 ScafM SNP 0009.scaffold00036 290567 2 AG GT scaffold625 ScafM SNP 0009.scaffold00036 290630 1 A G scaffold625 ScafM SNP 0009.scaffold00036 290632 1 C T scaffold625 ScafM INDEL 0009.scaffold00036 290661 2 .. GA scaffold625 ScafM SNP 0009.scaffold00036 290669 1 G T scaffold625 ScafM SNP 0009.scaffold00036 290696 1 T C scaffold625 ScafM SNP 0009.scaffold00036 290771 1 A C scaffold625 ScafM SNP 0009.scaffold00036 290803 1 C A scaffold625 ScafM INDEL 0009.scaffold00036 290814 1 T . scaffold625 ScafM INDEL 0009.scaffold00036 290823 1 . A scaffold625 ScafM SNP 0009.scaffold00036 290851 1 T C scaffold625 ScafM INDEL 0009.scaffold00036 290861 1 A . scaffold625 ScafM SNP 0009.scaffold00036 290865 1 T A scaffold625 ScafM SNP 0009.scaffold00036 290953 1 G C scaffold625 ScafM SNP 0009.scaffold00036 290974 1 C T scaffold625 ScafM SNP 0009.scaffold00036 291001 1 A G scaffold625 ScafM SNP 0009.scaffold00036 291015 1 T A scaffold625 ScafM SNP 0009.scaffold00036 291026 1 A G scaffold625 ScafM INDEL 0009.scaffold00036 291032 4 AAGG .... scaffold625 ScafM INDEL 0009.scaffold00036 291037 3 TTA ... scaffold625 ScafM SNP 0009.scaffold00036 291146 1 C A scaffold625 ScafM INDEL 0009.scaffold00036 291151 1 . G scaffold625 ScafM INDEL 0009.scaffold00036 291155 1 . G scaffold625 ScafM SNP 0009.scaffold00036 291253 1 C G scaffold625 ScafM INDEL 0009.scaffold00036 291267 2 AT .. scaffold625 ScafM SNP 0009.scaffold00036 291291 1 T C scaffold625 ScafM SNP 0009.scaffold00036 291300 1 T C scaffold625 ScafM SNP 0009.scaffold00036 291324 1 A G scaffold625 ScafM SNP 0009.scaffold00036 291361 1 G A scaffold625 ScafM SNP 0009.scaffold00036 291378 1 A C scaffold625 ScafM SNP 0009.scaffold00036 291383 2 TG CC scaffold625 ScafM SNP 0009.scaffold00036 291393 1 C A scaffold625 ScafM INDEL 0009.scaffold00036 291408 7 ....... AGCAGAC scaffold625 ScafM INDEL 0009.scaffold00036 291410 1 . C scaffold625 ScafM INDEL 0009.scaffold00036 291412 12 ............ TCTCATTTTATC scaffold625 ScafM INDEL 0009.scaffold00036 291417 12 ............ TCAGAGGAAAAT scaffold625 ScafM INDEL 0009.scaffold00036 291419 12 ............ TATTTATTACTC scaffold625 ScafM INDEL 0009.scaffold00036 291422 12 ............ TGTAATTAAACT scaffold625 ScafM SNP 0009.scaffold00036 291431 1 C T scaffold625 ScafM SNP 0009.scaffold00036 291439 1 C G scaffold625 ScafM INDEL 0009.scaffold00036 291469 1 A . scaffold625 ScafM SNP 0009.scaffold00036 291493 1 T C scaffold625 ScafM INDEL 0009.scaffold00036 291510 3 ... TTA scaffold625 ScafM SNP 0009.scaffold00036 291526 1 A G scaffold625 ScafM SNP 0009.scaffold00036 291788 1 C G scaffold625 ScafM INDEL 0009.scaffold00036 291792 4 .... AAAA scaffold625 ScafM SNP 0009.scaffold00036 291809 1 G C scaffold625 ScafM INDEL 0009.scaffold00036 291810 8 ........ TTTTTTTT scaffold625 ScafM SNP 0009.scaffold00036 291813 1 A T scaffold625 ScafM SNP 0009.scaffold00036 291828 1 C A scaffold625 ScafM SNP 0009.scaffold00036 291857 1 T C scaffold625 ScafM SNP 0009.scaffold00036 291897 1 A T scaffold625 ScafM SNP 0009.scaffold00036 291959 1 C T scaffold625 ScafM SNP 0009.scaffold00036 293568 1 A G scaffold625 ScafM SNP 0009.scaffold00036 293586 1 T C scaffold625 ScafM SNP 0009.scaffold00036 293602 2 TC GT scaffold625 ScafM SNP 0009.scaffold00036 293610 1 G C scaffold625 ScafM SNP 0009.scaffold00036 293612 1 T A scaffold625 ScafM SNP 0009.scaffold00036 293614 2 AA GG scaffold625 ScafM SNP 0009.scaffold00036 293635 1 C A scaffold625 ScafM SNP 0009.scaffold00036 293646 1 G A scaffold625 ReadM SNP 0009.scaffold00036 293699 1 T C - ReadM SNP 0009.scaffold00036 293706 1 A T - ReadM SNP 0009.scaffold00036 294400 1 G A - ReadM SNP 0009.scaffold00036 294411 1 T C - ReadM SNP 0009.scaffold00036 294714 1 G A - ReadM SNP 0009.scaffold00036 294725 1 G A - ScafM SNP 0009.scaffold00036 294786 1 G A scaffold625 ScafM SNP 0009.scaffold00036 294791 1 C A scaffold625 ScafM SNP 0009.scaffold00036 294794 1 C T scaffold625 ScafM SNP 0009.scaffold00036 294824 1 T C scaffold625 ScafM SNP 0009.scaffold00036 294845 1 C T scaffold625 Both SNP 0009.scaffold00036 294855 1 A C scaffold625 Both SNP 0009.scaffold00036 294889 1 A G scaffold625 Both SNP 0009.scaffold00036 294912 1 A G scaffold625 ScafM SNP 0009.scaffold00036 294952 1 G T scaffold625 ScafM SNP 0009.scaffold00036 294958 1 G T scaffold625 ScafM SNP 0009.scaffold00036 294971 1 A T scaffold625 ScafM SNP 0009.scaffold00036 294983 1 C T scaffold625 ScafM SNP 0009.scaffold00036 294996 2 CA TT scaffold625 ScafM SNP 0009.scaffold00036 295006 3 TGC GTA scaffold625 ScafM INDEL 0009.scaffold00036 296416 1 . T scaffold625 ReadM SNP 0009.scaffold00036 297117 1 G A - ScafM SNP 0009.scaffold00036 297696 1 A G scaffold625 ScafM SNP 0009.scaffold00036 297726 1 G C scaffold625 ScafM SNP 0009.scaffold00036 297739 1 T C scaffold625 ScafM SNP 0009.scaffold00036 297798 2 AC TT scaffold625 ScafM SNP 0009.scaffold00036 297885 1 G T scaffold625 Both SNP 0009.scaffold00036 298002 1 T A scaffold625 Both SNP 0009.scaffold00036 298010 1 A G scaffold625 ScafM SNP 0009.scaffold00036 298024 1 T C scaffold625 Both SNP 0009.scaffold00036 298074 1 G C scaffold625 Both SNP 0009.scaffold00036 298343 1 A G scaffold625 Both SNP 0009.scaffold00036 298349 1 A C scaffold625 ScafM SNP 0009.scaffold00036 298571 1 A G scaffold625 ScafM INDEL 0009.scaffold00036 298590 1 . A scaffold625 ScafM INDEL 0009.scaffold00036 298741 1 . T scaffold625 ScafM SNP 0009.scaffold00036 298774 1 G C scaffold625 ScafM SNP 0009.scaffold00036 298785 1 T C scaffold625 ScafM SNP 0009.scaffold00036 298798 1 A G scaffold625 Both SNP 0009.scaffold00036 298870 1 C T scaffold625 Both SNP 0009.scaffold00036 298881 1 T C scaffold625 ScafM SNP 0009.scaffold00036 298903 1 T C scaffold625 ScafM SNP 0009.scaffold00036 298922 1 G A scaffold625 ScafM SNP 0009.scaffold00036 298973 1 G A scaffold625 ScafM SNP 0009.scaffold00036 299011 1 T C scaffold625 ReadM INDEL 0009.scaffold00036 300242 1 . G - ReadM SNP 0009.scaffold00036 300541 1 G A - ReadM SNP 0009.scaffold00036 300555 1 C T - ReadM SNP 0009.scaffold00036 300562 1 G C - ReadM SNP 0009.scaffold00036 300575 1 A G - ReadM SNP 0009.scaffold00036 302171 1 G T - ReadM SNP 0009.scaffold00036 302201 1 T G - ReadM SNP 0009.scaffold00036 302282 1 C T - ReadM SNP 0009.scaffold00036 302325 1 T A - ReadM SNP 0009.scaffold00036 302493 1 C T - ReadM SNP 0009.scaffold00036 302525 1 C G - Both SNP 0009.scaffold00036 302700 1 A T scaffold39885 ReadM INDEL 0009.scaffold00036 302796 1 . T - ReadM INDEL 0009.scaffold00036 302953 1 . G - ScafM SNP 0009.scaffold00036 303117 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 303127 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 303131 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 303138 1 C T scaffold39885 ReadM SNP 0009.scaffold00036 303211 1 C A - ReadM SNP 0009.scaffold00036 303244 1 C T - Both SNP 0009.scaffold00036 303407 1 A G scaffold39885 ReadM SNP 0009.scaffold00036 303417 1 G T - ReadM INDEL 0009.scaffold00036 303468 1 A . - ReadM SNP 0009.scaffold00036 303792 1 C A - ReadM SNP 0009.scaffold00036 303993 1 T G - ReadM SNP 0009.scaffold00036 304281 1 T C - ReadM SNP 0009.scaffold00036 304316 1 C T - ReadM SNP 0009.scaffold00036 304460 1 A G - ReadM SNP 0009.scaffold00036 304464 1 C T - ReadM SNP 0009.scaffold00036 304568 1 T A - ScafM SNP 0009.scaffold00036 304742 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 304746 1 C T scaffold39885 ReadM SNP 0009.scaffold00036 305047 1 C T - ReadM SNP 0009.scaffold00036 305066 1 A G - ReadM SNP 0009.scaffold00036 305093 1 C T - Both SNP 0009.scaffold00036 305133 1 G A scaffold39885 ReadM SNP 0009.scaffold00036 305182 1 T C - ReadM SNP 0009.scaffold00036 305227 1 C G - Both SNP 0009.scaffold00036 305416 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 305543 1 G T scaffold39885 ReadM SNP 0009.scaffold00036 305761 1 C T - ScafM SNP 0009.scaffold00036 305932 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 305938 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 306051 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 306070 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 306081 1 G T scaffold39885 ScafM INDEL 0009.scaffold00036 306137 8 AGGCAATA ........ scaffold39885 ScafM SNP 0009.scaffold00036 306160 1 G A scaffold39885 ScafM INDEL 0009.scaffold00036 306169 3 ... AAA scaffold39885 Both SNP 0009.scaffold00036 306208 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 306477 1 C T scaffold39885 Both SNP 0009.scaffold00036 306484 1 A G scaffold39885 Both INDEL 0009.scaffold00036 306505 1 . A scaffold39885 Both SNP 0009.scaffold00036 306527 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 306592 1 G A scaffold39885 Both SNP 0009.scaffold00036 306595 1 T C scaffold39885 Both SNP 0009.scaffold00036 306653 1 G A scaffold39885 Both INDEL 0009.scaffold00036 306663 1 G . scaffold39885 Both SNP 0009.scaffold00036 306697 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 306711 1 A T scaffold39885 ScafM INDEL 0009.scaffold00036 306729 4 CCTT .... scaffold39885 ScafM SNP 0009.scaffold00036 306776 1 A C scaffold39885 ScafM SNP 0009.scaffold00036 306812 1 T A scaffold39885 ScafM INDEL 0009.scaffold00036 306820 2 GT .C scaffold39885 ScafM INDEL 0009.scaffold00036 306860 8 ........ TAGCAGAT scaffold39885 ScafM INDEL 0009.scaffold00036 306875 1 A . scaffold39885 ScafM SNP 0009.scaffold00036 306890 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 306892 1 G A scaffold39885 Both SNP 0009.scaffold00036 306950 1 C A scaffold39885 Both SNP 0009.scaffold00036 307009 1 T A scaffold39885 Both SNP 0009.scaffold00036 307017 1 C G scaffold39885 Both SNP 0009.scaffold00036 307030 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 307094 1 G T scaffold39885 ScafM SNP 0009.scaffold00036 307109 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 307115 1 C T scaffold39885 Both SNP 0009.scaffold00036 307160 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 307251 1 G T scaffold39885 ReadM SNP 0009.scaffold00036 307649 1 T A - ReadM SNP 0009.scaffold00036 307671 1 T C - ReadM SNP 0009.scaffold00036 307820 1 A G - ReadM SNP 0009.scaffold00036 307961 1 G T - ReadM SNP 0009.scaffold00036 308016 1 G A - ReadM SNP 0009.scaffold00036 308375 1 G T - ReadM SNP 0009.scaffold00036 308383 1 A C - ScafM SNP 0009.scaffold00036 308554 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 308583 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 308586 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 308598 1 A G scaffold39885 ScafM INDEL 0009.scaffold00036 308627 1 G . scaffold39885 ScafM SNP 0009.scaffold00036 308669 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 308681 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 308686 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 308699 1 G T scaffold39885 ScafM SNP 0009.scaffold00036 308701 1 A T scaffold39885 ScafM INDEL 0009.scaffold00036 308745 6 AGGGGG ...... scaffold39885 ScafM SNP 0009.scaffold00036 308760 1 G A scaffold39885 ScafM INDEL 0009.scaffold00036 308768 1 A . scaffold39885 ScafM SNP 0009.scaffold00036 308772 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 308799 1 T G scaffold39885 ScafM INDEL 0009.scaffold00036 308810 1 . T scaffold39885 ScafM SNP 0009.scaffold00036 308832 1 G A scaffold39885 Both SNP 0009.scaffold00036 308876 1 A G scaffold39885 Both SNP 0009.scaffold00036 308882 1 A T scaffold39885 Both INDEL 0009.scaffold00036 308913 1 T . scaffold39885 Both INDEL 0009.scaffold00036 309002 2 AT .. scaffold39885 ScafM SNP 0009.scaffold00036 309125 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 309128 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 309164 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 309171 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 309178 1 C G scaffold39885 ScafM SNP 0009.scaffold00036 309185 1 G T scaffold39885 ScafM SNP 0009.scaffold00036 309194 1 G A scaffold39885 Both SNP 0009.scaffold00036 309228 1 A G scaffold39885 Both SNP 0009.scaffold00036 309317 1 G C scaffold39885 Both SNP 0009.scaffold00036 309328 1 G A scaffold39885 Both SNP 0009.scaffold00036 309367 1 G C scaffold39885 Both SNP 0009.scaffold00036 309375 1 G A scaffold39885 Both SNP 0009.scaffold00036 309461 1 G A scaffold39885 Both SNP 0009.scaffold00036 309475 1 A T scaffold39885 Both SNP 0009.scaffold00036 309545 1 G A scaffold39885 Both SNP 0009.scaffold00036 309577 1 G A scaffold39885 Both SNP 0009.scaffold00036 309626 1 C T scaffold39885 Both SNP 0009.scaffold00036 309639 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 309686 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 309688 1 T C scaffold39885 Both SNP 0009.scaffold00036 309816 1 G A scaffold39885 ReadM SNP 0009.scaffold00036 309987 1 G A - ScafM SNP 0009.scaffold00036 310068 1 G A scaffold39885 ScafM INDEL 0009.scaffold00036 310118 2 .. TA scaffold39885 ScafM SNP 0009.scaffold00036 310133 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 310142 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 310153 1 A C scaffold39885 ScafM SNP 0009.scaffold00036 310165 1 C T scaffold39885 ReadM SNP 0009.scaffold00036 310331 1 T G - ReadM SNP 0009.scaffold00036 310339 1 T C - ReadM SNP 0009.scaffold00036 310361 1 G A - ReadM INDEL 0009.scaffold00036 310501 1 A . - ReadM SNP 0009.scaffold00036 310510 1 C G - ScafM SNP 0009.scaffold00036 310548 1 A G scaffold39885 Both SNP 0009.scaffold00036 310599 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 310625 1 G A scaffold39885 ReadM SNP 0009.scaffold00036 310679 1 A G - ReadM SNP 0009.scaffold00036 311119 1 G A - ReadM SNP 0009.scaffold00036 311145 1 T C - ReadM SNP 0009.scaffold00036 311237 1 G T - ScafM INDEL 0009.scaffold00036 311472 1 . C scaffold39885 ScafM SNP 0009.scaffold00036 311504 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 311806 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 311823 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 311835 1 G T scaffold39885 ScafM INDEL 0009.scaffold00036 311839 1 . C scaffold39885 ScafM SNP 0009.scaffold00036 311866 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 311879 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 311890 2 TT CA scaffold39885 ScafM SNP 0009.scaffold00036 311907 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 311916 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 311926 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 311944 1 G C scaffold39885 ScafM SNP 0009.scaffold00036 311957 1 C G scaffold39885 ScafM SNP 0009.scaffold00036 311969 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 311976 1 G C scaffold39885 ScafM SNP 0009.scaffold00036 311980 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 311992 1 G C scaffold39885 Both SNP 0009.scaffold00036 312014 1 C T scaffold39885 Both SNP 0009.scaffold00036 312055 1 C A scaffold39885 Both SNP 0009.scaffold00036 312072 1 T C scaffold39885 Both SNP 0009.scaffold00036 312137 1 G T scaffold39885 Both SNP 0009.scaffold00036 312152 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 312173 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 312185 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 312205 1 T C scaffold39885 ScafM INDEL 0009.scaffold00036 312211 1 . G scaffold39885 ScafM SNP 0009.scaffold00036 312224 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 312258 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 312266 1 T C scaffold39885 ScafM INDEL 0009.scaffold00036 312293 1 A . scaffold39885 ScafM SNP 0009.scaffold00036 312295 1 G C scaffold39885 ScafM SNP 0009.scaffold00036 312297 1 T A scaffold39885 ScafM INDEL 0009.scaffold00036 312324 1 T . scaffold39885 ScafM SNP 0009.scaffold00036 312348 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 312390 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 312409 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 312423 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 312425 1 C G scaffold39885 Both SNP 0009.scaffold00036 312450 1 G A scaffold39885 Both SNP 0009.scaffold00036 312514 1 G C scaffold39885 Both SNP 0009.scaffold00036 312522 1 C T scaffold39885 Both INDEL 0009.scaffold00036 312698 1 T . scaffold39885 Both SNP 0009.scaffold00036 312719 1 G C scaffold39885 Both SNP 0009.scaffold00036 312729 1 T C scaffold39885 Both SNP 0009.scaffold00036 312788 1 C T scaffold39885 Both SNP 0009.scaffold00036 312813 1 C G scaffold39885 Both SNP 0009.scaffold00036 312853 1 T A scaffold39885 Both SNP 0009.scaffold00036 312924 1 C A scaffold39885 Both SNP 0009.scaffold00036 313025 1 A G scaffold39885 Both SNP 0009.scaffold00036 313035 1 A T scaffold39885 Both SNP 0009.scaffold00036 313065 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313094 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 313096 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313113 1 G C scaffold39885 ScafM INDEL 0009.scaffold00036 313120 6 ...... GCGTGA scaffold39885 ScafM INDEL 0009.scaffold00036 313122 2 .. CC scaffold39885 ScafM SNP 0009.scaffold00036 313142 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 313146 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313162 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 313214 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 313236 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 313240 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313246 1 T C scaffold39885 ScafM INDEL 0009.scaffold00036 313258 2 .. CT scaffold39885 ScafM SNP 0009.scaffold00036 313260 1 A C scaffold39885 ScafM SNP 0009.scaffold00036 313266 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 313278 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 313281 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313291 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 313315 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 313346 1 A G scaffold39885 Both INDEL 0009.scaffold00036 313395 1 . A scaffold39885 Both SNP 0009.scaffold00036 313407 1 C T scaffold39885 Both SNP 0009.scaffold00036 313442 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 313470 1 G C scaffold39885 Both SNP 0009.scaffold00036 313479 1 T C scaffold39885 Both SNP 0009.scaffold00036 313531 1 A G scaffold39885 Both SNP 0009.scaffold00036 313537 1 C A scaffold39885 Both SNP 0009.scaffold00036 313592 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 313617 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 313626 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 313638 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 313651 1 C T scaffold39885 Both INDEL 0009.scaffold00036 313814 2 .. TT scaffold39885 Both SNP 0009.scaffold00036 313864 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 313913 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313920 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 313935 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 313942 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 314027 1 C T scaffold39885 ScafM INDEL 0009.scaffold00036 314037 1 T . scaffold39885 ScafM SNP 0009.scaffold00036 314039 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 314049 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 314062 1 A T scaffold39885 Both SNP 0009.scaffold00036 314094 1 A T scaffold39885 Both SNP 0009.scaffold00036 314128 1 A C scaffold39885 ScafM SNP 0009.scaffold00036 314268 2 CT TC scaffold39885 ScafM SNP 0009.scaffold00036 314318 1 C T scaffold39885 ReadM INDEL 0009.scaffold00036 314475 1 T . - ReadM SNP 0009.scaffold00036 314481 1 A G - ReadM INDEL 0009.scaffold00036 314547 2 .. AT - ReadM SNP 0009.scaffold00036 314569 1 T C - ReadM INDEL 0009.scaffold00036 314603 2 .. AT - ReadM SNP 0009.scaffold00036 315207 1 A T - ReadM SNP 0009.scaffold00036 315241 1 G T - ReadM INDEL 0009.scaffold00036 315245 1 . A - ReadM SNP 0009.scaffold00036 315297 1 G A - ReadM SNP 0009.scaffold00036 315393 1 T A - ScafM SNP 0009.scaffold00036 316028 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 316050 1 G T scaffold39885 ScafM SNP 0009.scaffold00036 316075 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 316080 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 316087 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 316092 1 A T scaffold39885 ScafM SNP 0009.scaffold00036 316125 1 C G scaffold39885 ScafM INDEL 0009.scaffold00036 316325 1 . T scaffold39885 ScafM SNP 0009.scaffold00036 316364 2 TA GG scaffold39885 ScafM SNP 0009.scaffold00036 316368 1 T C scaffold39885 ScafM SNP 0009.scaffold00036 316384 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 316390 1 A G scaffold39885 ScafM INDEL 0009.scaffold00036 316393 1 T . scaffold39885 ScafM SNP 0009.scaffold00036 316425 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 316431 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 316452 2 GT AC scaffold39885 ScafM SNP 0009.scaffold00036 316465 1 C T scaffold39885 ScafM INDEL 0009.scaffold00036 316477 4 .... TTTA scaffold39885 ScafM SNP 0009.scaffold00036 316480 1 T G scaffold39885 ScafM SNP 0009.scaffold00036 316495 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 316498 1 C A scaffold39885 ScafM SNP 0009.scaffold00036 316500 1 A G scaffold39885 ScafM SNP 0009.scaffold00036 316568 1 G A scaffold39885 ScafM INDEL 0009.scaffold00036 316583 1 T . scaffold39885 ScafM SNP 0009.scaffold00036 316587 1 G A scaffold39885 ScafM SNP 0009.scaffold00036 316592 1 C T scaffold39885 ScafM SNP 0009.scaffold00036 316607 1 T A scaffold39885 ScafM SNP 0009.scaffold00036 319588 1 C T scaffold28782 ScafM INDEL 0009.scaffold00036 319601 1 . T scaffold28782 ScafM SNP 0009.scaffold00036 319610 1 A G scaffold28782 ScafM SNP 0009.scaffold00036 319621 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319627 1 T A scaffold28782 ScafM SNP 0009.scaffold00036 319632 1 G A scaffold28782 ScafM INDEL 0009.scaffold00036 319645 2 AA .G scaffold28782 ScafM SNP 0009.scaffold00036 319649 1 A G scaffold28782 ScafM SNP 0009.scaffold00036 319660 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319676 1 A T scaffold28782 ScafM SNP 0009.scaffold00036 319700 1 A G scaffold28782 ScafM SNP 0009.scaffold00036 319713 1 C T scaffold28782 ScafM SNP 0009.scaffold00036 319717 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 319719 1 A C scaffold28782 ScafM SNP 0009.scaffold00036 319730 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319736 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319738 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319740 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 319745 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 319750 1 G C scaffold28782 ScafM SNP 0009.scaffold00036 319766 1 C T scaffold28782 ScafM SNP 0009.scaffold00036 319786 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 319791 2 CT TC scaffold28782 ScafM SNP 0009.scaffold00036 319799 2 GC AA scaffold28782 ScafM INDEL 0009.scaffold00036 319804 1 A . scaffold28782 ScafM SNP 0009.scaffold00036 319812 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 319816 1 C A scaffold28782 ScafM SNP 0009.scaffold00036 319830 1 A G scaffold28782 ScafM SNP 0009.scaffold00036 319851 1 A C scaffold28782 ScafM SNP 0009.scaffold00036 319861 1 A T scaffold28782 ScafM INDEL 0009.scaffold00036 319883 2 .. GT scaffold28782 ScafM INDEL 0009.scaffold00036 319892 5 GAATC ..... scaffold28782 ScafM INDEL 0009.scaffold00036 319914 1 A . scaffold28782 ScafM SNP 0009.scaffold00036 319926 1 A T scaffold28782 ScafM SNP 0009.scaffold00036 319928 1 A C scaffold28782 ScafM SNP 0009.scaffold00036 319931 1 C T scaffold28782 ScafM INDEL 0009.scaffold00036 319937 9 ......... ATCCTACTT scaffold28782 ScafM INDEL 0009.scaffold00036 319940 11 ........... AAATTTCCCAT scaffold28782 ScafM SNP 0009.scaffold00036 319945 1 T A scaffold28782 ScafM SNP 0009.scaffold00036 319960 1 A T scaffold28782 ScafM INDEL 0009.scaffold00036 319964 1 . G scaffold28782 ScafM SNP 0009.scaffold00036 319966 2 CC AA scaffold28782 ScafM SNP 0009.scaffold00036 320003 1 A T scaffold28782 ScafM INDEL 0009.scaffold00036 320011 2 AC .. scaffold28782 ScafM INDEL 0009.scaffold00036 320016 6 ATACTG ...... scaffold28782 ScafM INDEL 0009.scaffold00036 320037 2 .. AT scaffold28782 ScafM INDEL 0009.scaffold00036 320041 1 . C scaffold28782 ScafM INDEL 0009.scaffold00036 320042 2 .. CT scaffold28782 ScafM SNP 0009.scaffold00036 320044 1 A C scaffold28782 ScafM SNP 0009.scaffold00036 320047 2 AA CT scaffold28782 ScafM INDEL 0009.scaffold00036 320051 3 .AC TTT scaffold28782 ScafM INDEL 0009.scaffold00036 320056 4 .... TTTT scaffold28782 ScafM SNP 0009.scaffold00036 320059 3 CTT AAA scaffold28782 ScafM SNP 0009.scaffold00036 320063 1 T A scaffold28782 ScafM INDEL 0009.scaffold00036 320069 1 . T scaffold28782 ScafM SNP 0009.scaffold00036 320098 1 G A scaffold28782 Both SNP 0009.scaffold00036 320359 1 T C scaffold28782 Both SNP 0009.scaffold00036 320449 1 C T scaffold28782 Both SNP 0009.scaffold00036 320599 1 G A scaffold28782 Both SNP 0009.scaffold00036 320605 1 C T scaffold28782 Both SNP 0009.scaffold00036 320689 1 A G scaffold28782 Both SNP 0009.scaffold00036 320935 1 C A scaffold28782 Both SNP 0009.scaffold00036 320989 1 G A scaffold28782 Both SNP 0009.scaffold00036 321031 1 A G scaffold28782 Both SNP 0009.scaffold00036 321154 1 G A scaffold28782 Both SNP 0009.scaffold00036 321279 1 A G scaffold28782 Both SNP 0009.scaffold00036 321445 1 A G scaffold28782 Both SNP 0009.scaffold00036 321480 1 T A scaffold28782 Both SNP 0009.scaffold00036 321556 1 A G scaffold28782 Both SNP 0009.scaffold00036 321625 1 A G scaffold28782 Both SNP 0009.scaffold00036 321687 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 321721 1 G C scaffold28782 ScafM INDEL 0009.scaffold00036 321723 6 TGTGAG ...... scaffold28782 Both INDEL 0009.scaffold00036 321910 1 . A scaffold28782 ScafM INDEL 0009.scaffold00036 321955 1 G . scaffold28782 Both SNP 0009.scaffold00036 322076 1 A T scaffold28782 ReadM SNP 0009.scaffold00036 322089 1 C T - ReadM SNP 0009.scaffold00036 322171 1 C T - ReadM SNP 0009.scaffold00036 322236 1 A G - ReadM SNP 0009.scaffold00036 322271 1 A T - ReadM SNP 0009.scaffold00036 322291 1 A T - ReadM INDEL 0009.scaffold00036 322464 1 G . - ScafM SNP 0009.scaffold00036 322662 1 A C scaffold28782 ScafM SNP 0009.scaffold00036 322702 2 TC AT scaffold28782 ScafM INDEL 0009.scaffold00036 322858 1 T . scaffold28782 ScafM SNP 0009.scaffold00036 323038 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 323455 1 A C scaffold28782 ScafM INDEL 0009.scaffold00036 323468 2 .. TT scaffold28782 ScafM SNP 0009.scaffold00036 323481 1 A T scaffold28782 ScafM INDEL 0009.scaffold00036 323786 7 AGTCAAA ....... scaffold28782 ScafM INDEL 0009.scaffold00036 323814 3 ... TTT scaffold28782 Both SNP 0009.scaffold00036 323965 1 A G scaffold28782 ReadM SNP 0009.scaffold00036 324005 1 C T - ScafM SNP 0009.scaffold00036 324135 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 324182 1 T C scaffold28782 ScafM SNP 0009.scaffold00036 324380 2 TT CC scaffold28782 ScafM SNP 0009.scaffold00036 324500 1 T A scaffold28782 ReadM SNP 0009.scaffold00036 325503 1 A G - ScafM SNP 0009.scaffold00036 325707 1 T G scaffold28782 Both SNP 0009.scaffold00036 325891 1 T A scaffold28782 Both SNP 0009.scaffold00036 326073 1 C A scaffold28782 ReadM INDEL 0009.scaffold00036 326088 1 . A - ReadM SNP 0009.scaffold00036 326135 1 C T - ReadM SNP 0009.scaffold00036 326137 1 C T - ReadM SNP 0009.scaffold00036 326146 1 G A - Both SNP 0009.scaffold00036 326594 1 G A scaffold28782 ScafM SNP 0009.scaffold00036 326688 1 G C scaffold28782 ScafM SNP 0009.scaffold00036 326713 1 A G scaffold28782 ScafM SNP 0009.scaffold00036 326715 1 A G scaffold28782 ScafM INDEL 0009.scaffold00036 327472 1 . A scaffold28782 ReadM SNP 0009.scaffold00036 327905 1 T C - ScafM SNP 0009.scaffold00036 328307 1 A T scaffold18961 ScafM SNP 0009.scaffold00036 328348 1 T C scaffold18961 ReadM SNP 0009.scaffold00036 328464 1 G A - ScafM INDEL 0009.scaffold00036 329401 9 AGGCGTCAA ......... scaffold18961 ReadM SNP 0009.scaffold00036 330157 1 A C - ReadM SNP 0009.scaffold00036 330304 1 G C - ScafM SNP 0009.scaffold00036 330353 1 G C scaffold18961 ScafM SNP 0009.scaffold00036 330459 1 G T scaffold18961 Both SNP 0009.scaffold00036 330562 1 A G scaffold18961 Both SNP 0009.scaffold00036 330662 1 A G scaffold18961 Both SNP 0009.scaffold00036 330664 1 A G scaffold18961 Both SNP 0009.scaffold00036 330675 1 C T scaffold18961 ScafM INDEL 0009.scaffold00036 330739 1 A . scaffold18961 ScafM SNP 0009.scaffold00036 330757 1 T G scaffold18961 ScafM SNP 0009.scaffold00036 330843 1 T C scaffold18961 Both INDEL 0009.scaffold00036 330931 1 A . scaffold18961 Both SNP 0009.scaffold00036 330947 1 C T scaffold18961 ReadM SNP 0009.scaffold00036 331910 1 C A - ReadM SNP 0009.scaffold00036 331995 1 C T - ReadM SNP 0009.scaffold00036 332089 1 A T - ReadM SNP 0009.scaffold00036 332233 1 A C - ReadM SNP 0009.scaffold00036 332305 1 A G - ReadM SNP 0009.scaffold00036 332513 1 T A - ReadM SNP 0009.scaffold00036 333152 1 T C - ScafM SNP 0009.scaffold00036 333972 1 T A scaffold18961 ReadM SNP 0009.scaffold00036 334969 1 G T - ReadM SNP 0009.scaffold00036 335025 1 C T - ReadM SNP 0009.scaffold00036 335291 1 T C - ReadM SNP 0009.scaffold00036 335401 1 G A - ReadM SNP 0009.scaffold00036 335410 1 C A - ReadM SNP 0009.scaffold00036 335530 1 G C - ReadM INDEL 0009.scaffold00036 335548 2 .. TC - ReadM SNP 0009.scaffold00036 335727 1 G A - ReadM SNP 0009.scaffold00036 335762 1 C A - ReadM SNP 0009.scaffold00036 335776 1 G C - ReadM SNP 0009.scaffold00036 336016 1 T G - ReadM SNP 0009.scaffold00036 336166 1 A G - ReadM SNP 0009.scaffold00036 336226 1 C A - ReadM SNP 0009.scaffold00036 336810 1 T C - ReadM SNP 0009.scaffold00036 336859 1 T C - ReadM SNP 0009.scaffold00036 337727 1 A G - ReadM SNP 0009.scaffold00036 337747 1 T A - ReadM SNP 0009.scaffold00036 337762 1 C T - ReadM INDEL 0009.scaffold00036 337817 1 . T - ReadM SNP 0009.scaffold00036 338036 1 C T - ReadM SNP 0009.scaffold00036 338102 1 T C - ReadM SNP 0009.scaffold00036 338179 1 G A - ReadM SNP 0009.scaffold00036 338540 1 C T - ReadM SNP 0009.scaffold00036 338694 1 A G - ReadM SNP 0009.scaffold00036 339253 1 A G - ReadM SNP 0009.scaffold00036 339446 1 C T - ReadM SNP 0009.scaffold00036 339606 1 G A - ReadM SNP 0009.scaffold00036 339643 1 T A - ReadM SNP 0009.scaffold00036 339660 1 C A - ReadM SNP 0009.scaffold00036 339665 1 A G - ReadM INDEL 0009.scaffold00036 339956 1 . A - ReadM SNP 0009.scaffold00036 340590 1 C T - ReadM SNP 0009.scaffold00036 340736 1 C T - ReadM SNP 0009.scaffold00036 340911 1 G A - ReadM SNP 0009.scaffold00036 340955 1 G T - ReadM SNP 0009.scaffold00036 341014 1 A G - ReadM SNP 0009.scaffold00036 342630 1 G C - ReadM SNP 0009.scaffold00036 342754 1 T C - ReadM SNP 0009.scaffold00036 342809 1 C T - ReadM SNP 0009.scaffold00036 343324 1 T G - ReadM INDEL 0009.scaffold00036 343476 1 . A - Both SNP 0009.scaffold00036 343605 1 C T scaffold18961 ReadM SNP 0009.scaffold00036 343732 1 A G - Both SNP 0009.scaffold00036 343862 1 A T scaffold18961 ReadM SNP 0009.scaffold00036 344365 1 A C - ReadM SNP 0009.scaffold00036 344800 1 G A - ReadM SNP 0009.scaffold00036 344903 1 G A - ReadM SNP 0009.scaffold00036 345154 1 A G - ReadM INDEL 0009.scaffold00036 345166 1 . T - ReadM SNP 0009.scaffold00036 345215 1 G A - ReadM INDEL 0009.scaffold00036 345299 1 . A - ReadM SNP 0009.scaffold00036 345506 1 A C - ReadM SNP 0009.scaffold00036 345514 1 T C - ReadM SNP 0009.scaffold00036 345656 1 T C - ReadM SNP 0009.scaffold00036 345715 1 C T - ReadM SNP 0009.scaffold00036 346160 1 G T - ReadM SNP 0009.scaffold00036 346275 1 A C - ReadM SNP 0009.scaffold00036 346389 1 G A - ReadM SNP 0009.scaffold00036 346765 1 T C - ReadM SNP 0009.scaffold00036 346904 1 A C - ReadM SNP 0009.scaffold00036 346915 1 C A - ReadM SNP 0009.scaffold00036 346937 1 G A - Both SNP 0009.scaffold00036 346966 1 A G scaffold18961 Both INDEL 0009.scaffold00036 347087 1 T . scaffold18961 Both SNP 0009.scaffold00036 347147 1 G A scaffold18961 Both SNP 0009.scaffold00036 347224 1 C A scaffold18961 ReadM SNP 0009.scaffold00036 347469 1 A T - ReadM SNP 0009.scaffold00036 347600 1 G A - ReadM SNP 0009.scaffold00036 347607 1 A T - ReadM SNP 0009.scaffold00036 347610 1 A T - ReadM INDEL 0009.scaffold00036 347776 1 A . - Both SNP 0009.scaffold00036 347859 1 A G scaffold18961 ScafM INDEL 0009.scaffold00036 347950 7 ....... GTTGTTC scaffold18961 ReadM SNP 0009.scaffold00036 347977 1 G A - Both SNP 0009.scaffold00036 348036 1 A G scaffold18961 Both SNP 0009.scaffold00036 348044 1 C G scaffold18961 ReadM SNP 0009.scaffold00036 348166 1 C T - ReadM SNP 0009.scaffold00036 348218 1 C T - ReadM SNP 0009.scaffold00036 348226 1 G T - ReadM SNP 0009.scaffold00036 348440 1 C T - ReadM SNP 0009.scaffold00036 348444 1 A C - ReadM SNP 0009.scaffold00036 348471 1 T A - ReadM SNP 0009.scaffold00036 348560 1 C T - ReadM INDEL 0009.scaffold00036 349228 1 T . - ReadM SNP 0009.scaffold00036 349374 1 A G - ReadM SNP 0009.scaffold00036 349982 1 T C - ReadM SNP 0009.scaffold00036 349992 1 C T - ReadM SNP 0009.scaffold00036 350004 1 T C - ReadM SNP 0009.scaffold00036 350116 1 C T - ReadM SNP 0009.scaffold00036 350247 1 G C - ReadM SNP 0009.scaffold00036 350507 1 T C - ReadM SNP 0009.scaffold00036 350549 1 A G - ScafM SNP 0009.scaffold00036 350805 1 T A scaffold18961 ScafM INDEL 0009.scaffold00036 351175 7 ....... ATCACTA scaffold18961 ScafM INDEL 0009.scaffold00036 351403 1 . T scaffold18961 ReadM SNP 0009.scaffold00036 351666 1 C T - Both SNP 0009.scaffold00036 352244 1 T C scaffold18961 Both SNP 0009.scaffold00036 352930 1 C G scaffold18961 Both INDEL 0009.scaffold00036 352941 1 A . scaffold18961 ReadM SNP 0009.scaffold00036 353019 1 A C - ReadM SNP 0009.scaffold00036 353073 1 C T - ScafM INDEL 0009.scaffold00036 353226 7 AGTATAA ....... scaffold18961 ScafM SNP 0009.scaffold00036 353579 1 A G scaffold18961 Both SNP 0009.scaffold00036 353673 1 T C scaffold18961 Both SNP 0009.scaffold00036 353788 1 T G scaffold18961 Both SNP 0009.scaffold00036 353877 1 G T scaffold18961 Both SNP 0009.scaffold00036 354742 1 A T scaffold18961 Both SNP 0009.scaffold00036 354811 1 A C scaffold18961 ScafM SNP 0009.scaffold00036 355531 1 C T scaffold18961 ScafM SNP 0009.scaffold00036 355594 1 A C scaffold18961 Both SNP 0009.scaffold00036 356211 1 A G scaffold18961 ReadM INDEL 0009.scaffold00036 357335 1 . A - ReadM SNP 0009.scaffold00036 357441 1 C A - Both SNP 0009.scaffold00036 357709 1 A G scaffold18961 ReadM SNP 0009.scaffold00036 357851 1 G A - Both SNP 0009.scaffold00036 358161 1 G A scaffold18961 Both SNP 0009.scaffold00036 358208 1 T C scaffold18961 Both SNP 0009.scaffold00036 359145 1 C A scaffold18961 Both SNP 0009.scaffold00036 359202 1 T C scaffold18961 ReadM SNP 0009.scaffold00036 359254 1 T A - Both SNP 0009.scaffold00036 360147 1 A T scaffold18961 Both SNP 0009.scaffold00036 360745 1 A G scaffold18961 Both SNP 0009.scaffold00036 360820 1 G C scaffold18961 Both SNP 0009.scaffold00036 360854 1 A G scaffold18961 ScafM SNP 0009.scaffold00036 361064 1 G A scaffold18961 ScafM SNP 0009.scaffold00036 361084 1 C A scaffold18961 Both SNP 0009.scaffold00036 361209 1 A G scaffold18961 ScafM INDEL 0009.scaffold00036 361549 18 TAAGGTATTAGAGAGAAA .................. scaffold18961 ScafM SNP 0009.scaffold00036 361610 1 T C scaffold18961 Both SNP 0009.scaffold00036 362304 1 C G scaffold18961 ScafM SNP 0009.scaffold00036 362381 1 A G scaffold18961 ScafM SNP 0009.scaffold00036 362412 1 T C scaffold18961 ScafM SNP 0009.scaffold00036 362418 1 T C scaffold18961 ScafM SNP 0009.scaffold00036 362457 1 A C scaffold18961 Both SNP 0009.scaffold00036 362480 1 T C scaffold18961 Both SNP 0009.scaffold00036 362579 1 A G scaffold18961 Both SNP 0009.scaffold00036 362629 1 G A scaffold18961 ScafM SNP 0009.scaffold00036 362707 1 T C scaffold18961 ScafM SNP 0009.scaffold00036 362791 1 C T scaffold18961 Both SNP 0009.scaffold00036 362932 1 A G scaffold18961 ScafM SNP 0009.scaffold00036 362942 1 T A scaffold18961 ScafM SNP 0009.scaffold00036 362960 1 A G scaffold18961 ScafM SNP 0009.scaffold00036 363032 1 T A scaffold18961 ScafM INDEL 0009.scaffold00036 363042 17 AGAAGACGAGCTAGACG ................. scaffold18961 ScafM SNP 0009.scaffold00036 363176 1 T C scaffold18961 ReadM SNP 0009.scaffold00036 363422 1 C T - ReadM SNP 0009.scaffold00036 363722 1 A G - ReadM SNP 0009.scaffold00036 363766 1 G A - ReadM SNP 0009.scaffold00036 363802 1 G T - Both SNP 0009.scaffold00036 363835 1 G A scaffold35647 Both SNP 0009.scaffold00036 363851 1 T C scaffold35647 ReadM SNP 0009.scaffold00036 363966 1 A C - Both SNP 0009.scaffold00036 364051 1 T C scaffold35647 Both SNP 0009.scaffold00036 364058 1 C T scaffold35647 ScafM SNP 0009.scaffold00036 364080 1 A T scaffold35647 ScafM INDEL 0009.scaffold00036 364089 12 ............ TCCTTGCTTGTT scaffold35647 ScafM SNP 0009.scaffold00036 364124 1 T C scaffold35647 ScafM SNP 0009.scaffold00036 364132 1 C T scaffold35647 ScafM SNP 0009.scaffold00036 364148 1 T C scaffold35647 ScafM SNP 0009.scaffold00036 364174 1 G A scaffold35647 ScafM SNP 0009.scaffold00036 364194 1 C T scaffold35647 ScafM SNP 0009.scaffold00036 364199 1 T C scaffold35647 ScafM SNP 0009.scaffold00036 364217 1 G A scaffold35647 ScafM SNP 0009.scaffold00036 364243 1 C T scaffold35647 ScafM INDEL 0009.scaffold00036 364311 21 ..................... CCTTTTTTTCGTTTTTTTTTT scaffold35647 Both SNP 0009.scaffold00036 364366 1 G C scaffold35647 ScafM INDEL 0009.scaffold00036 364440 13 ............. TATTTTTGTTTTT scaffold35647 Both SNP 0009.scaffold00036 364511 1 T C scaffold35647 Both SNP 0009.scaffold00036 364552 1 C A scaffold35647 ReadM SNP 0009.scaffold00036 364957 1 A G - ReadM SNP 0009.scaffold00036 364998 1 A T - ReadM SNP 0009.scaffold00036 365003 1 G A - ReadM SNP 0009.scaffold00036 365327 1 A G - ReadM SNP 0009.scaffold00036 365344 1 T C - ReadM SNP 0009.scaffold00036 365349 1 A T - ReadM INDEL 0009.scaffold00036 365461 1 . T - ReadM SNP 0009.scaffold00036 365495 1 G A - ReadM SNP 0009.scaffold00036 365522 1 T G - ReadM SNP 0009.scaffold00036 365669 1 A G - ReadM SNP 0009.scaffold00036 365711 1 T C - ReadM SNP 0009.scaffold00036 365787 1 A T - ReadM SNP 0009.scaffold00036 365820 1 G A - ReadM SNP 0009.scaffold00036 365891 1 A C - ReadM SNP 0009.scaffold00036 365934 1 G A - ReadM SNP 0009.scaffold00036 365944 1 G A - ReadM SNP 0009.scaffold00036 366023 1 C A - ReadM SNP 0009.scaffold00036 366064 1 C T - ReadM SNP 0009.scaffold00036 366084 1 T C - ReadM SNP 0009.scaffold00036 366356 1 C T - ReadM SNP 0009.scaffold00036 366368 1 A T - ReadM SNP 0009.scaffold00036 366624 1 G A - ReadM SNP 0009.scaffold00036 366724 1 G T - ReadM SNP 0009.scaffold00036 366801 1 T C - ReadM SNP 0009.scaffold00036 366830 1 T G - ReadM SNP 0009.scaffold00036 366912 1 G C - ReadM SNP 0009.scaffold00036 367028 1 T C - ReadM SNP 0009.scaffold00036 367034 1 G A - ReadM SNP 0009.scaffold00036 367038 1 C T - ReadM SNP 0009.scaffold00036 367185 1 T C - ReadM SNP 0009.scaffold00036 367231 1 C T - ReadM SNP 0009.scaffold00036 367252 1 T G - ReadM SNP 0009.scaffold00036 367344 1 C A - ReadM SNP 0009.scaffold00036 367419 1 A G - ReadM SNP 0009.scaffold00036 367447 1 T C - ReadM SNP 0009.scaffold00036 367509 1 T C - ReadM INDEL 0009.scaffold00036 367551 1 . A - ReadM INDEL 0009.scaffold00036 367567 2 .. AC - ReadM SNP 0009.scaffold00036 367747 1 T A - ReadM SNP 0009.scaffold00036 367900 1 C A - ReadM SNP 0009.scaffold00036 367903 1 T C - ReadM SNP 0009.scaffold00036 367969 1 G A - ReadM SNP 0009.scaffold00036 368001 1 C T - ReadM SNP 0009.scaffold00036 368106 1 G T - ReadM SNP 0009.scaffold00036 368133 1 G T - ReadM SNP 0009.scaffold00036 368176 1 A G - ReadM SNP 0009.scaffold00036 368314 1 C G - ReadM SNP 0009.scaffold00036 368454 1 T C - ReadM SNP 0009.scaffold00036 368489 1 T C - ReadM SNP 0009.scaffold00036 368513 1 A T - ReadM SNP 0009.scaffold00036 368598 1 C T - Both SNP 0009.scaffold00036 368906 1 G A scaffold35647 Both SNP 0009.scaffold00036 368960 1 A T scaffold35647 ReadM INDEL 0009.scaffold00036 369038 1 A . - ReadM SNP 0009.scaffold00036 369052 1 G T - ReadM SNP 0009.scaffold00036 369371 1 G A - ReadM SNP 0009.scaffold00036 369480 1 G A - ReadM SNP 0009.scaffold00036 369521 1 C T - ReadM SNP 0009.scaffold00036 369541 1 A G - ReadM SNP 0009.scaffold00036 369550 1 G A - ReadM SNP 0009.scaffold00036 369651 1 T C - Both SNP 0009.scaffold00036 369809 1 C T scaffold1802 Both SNP 0009.scaffold00036 369861 1 G A scaffold1802 Both SNP 0009.scaffold00036 369887 1 C T scaffold1802 ScafM SNP 0009.scaffold00036 370016 1 G A scaffold1802 ScafM SNP 0009.scaffold00036 370025 2 TA GG scaffold1802 ScafM INDEL 0009.scaffold00036 370033 1 T . scaffold1802 ScafM SNP 0009.scaffold00036 370036 1 T A scaffold1802 ScafM SNP 0009.scaffold00036 370042 1 A G scaffold1802 ScafM SNP 0009.scaffold00036 370052 1 G A scaffold1802 ScafM SNP 0009.scaffold00036 370093 1 T A scaffold1802 ScafM SNP 0009.scaffold00036 370100 1 A C scaffold1802 ScafM SNP 0009.scaffold00036 370117 1 C A scaffold1802 ScafM SNP 0009.scaffold00036 370139 1 A C scaffold1802 ScafM SNP 0009.scaffold00036 370146 1 T A scaffold1802 ScafM SNP 0009.scaffold00036 370149 1 T A scaffold1802 ScafM SNP 0009.scaffold00036 370157 1 C T scaffold1802 ReadM SNP 0009.scaffold00036 370236 1 A G - ReadM SNP 0009.scaffold00036 370243 1 C G - ReadM SNP 0009.scaffold00036 370311 1 A T - ReadM SNP 0009.scaffold00036 370320 1 G T - ReadM SNP 0009.scaffold00036 370362 1 A T - ScafM SNP 0009.scaffold00036 370590 1 T C scaffold1802 ScafM SNP 0009.scaffold00036 370622 1 A G scaffold1802 Both SNP 0009.scaffold00036 370653 1 C T scaffold1802 ReadM SNP 0009.scaffold00036 370846 1 T C - ReadM SNP 0009.scaffold00036 379934 1 T C - Both SNP 0009.scaffold00036 380039 1 A T scaffold2271 Both SNP 0009.scaffold00036 380058 1 A G scaffold2271 Both INDEL 0009.scaffold00036 380133 1 . A scaffold2271 ReadM SNP 0009.scaffold00036 380273 1 T C - ReadM SNP 0009.scaffold00036 380461 1 G A - Both SNP 0009.scaffold00036 380480 1 C T scaffold2271 Both SNP 0009.scaffold00036 380589 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 380644 1 T G scaffold2271 ScafM INDEL 0009.scaffold00036 380656 13 GGTGAAGAGAAAC ............. scaffold2271 ScafM SNP 0009.scaffold00036 380673 1 A G scaffold2271 ReadM SNP 0009.scaffold00036 381047 1 C T - ReadM SNP 0009.scaffold00036 381068 1 C T - ReadM SNP 0009.scaffold00036 381071 1 T C - ReadM SNP 0009.scaffold00036 381277 1 G T - ReadM SNP 0009.scaffold00036 381375 1 T G - ReadM SNP 0009.scaffold00036 381383 1 T C - ReadM SNP 0009.scaffold00036 381418 1 G T - ReadM INDEL 0009.scaffold00036 381419 1 . A - ReadM SNP 0009.scaffold00036 381492 1 C T - ReadM SNP 0009.scaffold00036 381536 1 T C - ReadM SNP 0009.scaffold00036 381585 1 T C - ReadM SNP 0009.scaffold00036 381607 1 A G - ScafM SNP 0009.scaffold00036 381971 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 382071 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 382109 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 382155 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 382158 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 382257 3 ... TGG scaffold2271 ScafM INDEL 0009.scaffold00036 382289 1 . T scaffold2271 ScafM SNP 0009.scaffold00036 382305 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 382310 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 382332 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 382377 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 382402 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 382441 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 382521 1 . A scaffold2271 ScafM SNP 0009.scaffold00036 382601 1 T A scaffold2271 ScafM INDEL 0009.scaffold00036 382634 8 CCAAGTTG ........ scaffold2271 ScafM INDEL 0009.scaffold00036 382704 2 .. CT scaffold2271 ScafM INDEL 0009.scaffold00036 382707 1 . T scaffold2271 ScafM INDEL 0009.scaffold00036 382712 1 . A scaffold2271 ScafM SNP 0009.scaffold00036 382715 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 382750 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 382793 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 382818 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 382827 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 382848 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 382864 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 382954 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 382973 1 C T scaffold2271 ScafM INDEL 0009.scaffold00036 382976 2 CC .. scaffold2271 ScafM INDEL 0009.scaffold00036 383025 7 ....... CGTGCTG scaffold2271 ScafM SNP 0009.scaffold00036 383036 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 383040 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 383062 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 384052 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 384363 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 384409 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 384456 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 384491 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 384542 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 384838 1 T C scaffold34815 ScafM SNP 0009.scaffold00036 384877 1 G A scaffold34815 ScafM INDEL 0009.scaffold00036 384893 5 TGCGA ..... scaffold34815 ScafM INDEL 0009.scaffold00036 384900 4 ACCC .... scaffold34815 ScafM INDEL 0009.scaffold00036 384913 2 GA .. scaffold34815 ScafM INDEL 0009.scaffold00036 384919 6 CCCGAT ...... scaffold34815 ScafM SNP 0009.scaffold00036 384996 1 G A scaffold34815 ScafM INDEL 0009.scaffold00036 385031 2 .. TA scaffold34815 ScafM SNP 0009.scaffold00036 385075 1 T C scaffold34815 ScafM SNP 0009.scaffold00036 385290 1 G C scaffold34815 ScafM SNP 0009.scaffold00036 385439 1 C T scaffold34815 ScafM SNP 0009.scaffold00036 385480 1 C T scaffold34815 ScafM SNP 0009.scaffold00036 385568 1 C A scaffold34815 ScafM INDEL 0009.scaffold00036 385661 34 TCAAACACTATTCCTTCAATAATATGTATATATG .................................. scaffold34815 ScafM INDEL 0009.scaffold00036 385889 1 . G scaffold34815 ScafM SNP 0009.scaffold00036 386101 1 G A scaffold64 ScafM SNP 0009.scaffold00036 386121 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386129 1 A G scaffold64 ScafM SNP 0009.scaffold00036 386141 1 G T scaffold64 ScafM SNP 0009.scaffold00036 386161 2 GA AT scaffold64 ScafM SNP 0009.scaffold00036 386183 1 G T scaffold64 ScafM SNP 0009.scaffold00036 386213 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386229 1 T G scaffold64 ScafM INDEL 0009.scaffold00036 386248 1 . A scaffold64 ScafM SNP 0009.scaffold00036 386263 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386295 1 C A scaffold64 ScafM SNP 0009.scaffold00036 386331 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386333 1 A G scaffold64 ScafM SNP 0009.scaffold00036 386338 1 T A scaffold64 ScafM SNP 0009.scaffold00036 386347 1 G A scaffold64 ScafM SNP 0009.scaffold00036 386384 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386404 1 T C scaffold64 ScafM SNP 0009.scaffold00036 386414 1 G C scaffold64 ScafM INDEL 0009.scaffold00036 386446 1 . T scaffold64 ScafM INDEL 0009.scaffold00036 386448 2 .. TT scaffold64 ScafM INDEL 0009.scaffold00036 386449 1 . A scaffold64 ScafM SNP 0009.scaffold00036 386455 1 T C scaffold64 ScafM SNP 0009.scaffold00036 386466 1 G T scaffold64 ScafM SNP 0009.scaffold00036 386501 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386520 1 A G scaffold64 ScafM SNP 0009.scaffold00036 386537 1 G A scaffold64 ScafM SNP 0009.scaffold00036 386547 1 C T scaffold64 ScafM SNP 0009.scaffold00036 386592 1 T G scaffold64 ScafM SNP 0009.scaffold00036 387242 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 387246 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 387253 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 387261 1 C T scaffold2271 ScafM INDEL 0009.scaffold00036 387268 1 . A scaffold2271 ScafM SNP 0009.scaffold00036 387275 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 387357 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396058 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 396081 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396095 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 396104 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 396107 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 396118 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 396134 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 396136 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 396150 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 396156 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396171 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 396198 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 396207 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 396219 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396222 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396255 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 396275 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396295 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 396300 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 396302 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 396330 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396338 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 396345 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 396348 1 T . scaffold2271 ScafM SNP 0009.scaffold00036 396357 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396360 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 396363 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396401 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 396416 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396426 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 396447 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 396504 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 396523 1 . G scaffold2271 ScafM SNP 0009.scaffold00036 396526 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 396528 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 396539 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 396568 2 TC CA scaffold2271 ScafM SNP 0009.scaffold00036 396574 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 396885 7 ACCCCCT ....... scaffold3656 ScafM SNP 0009.scaffold00036 396919 1 T G scaffold3656 ScafM SNP 0009.scaffold00036 396922 1 C T scaffold3656 ScafM SNP 0009.scaffold00036 402462 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 402499 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 402502 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 402544 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 402564 1 A T scaffold2271 ScafM INDEL 0009.scaffold00036 402618 1 . G scaffold2271 ScafM SNP 0009.scaffold00036 402624 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 402629 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 402644 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 402653 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 402673 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 402678 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 402702 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 402715 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 402723 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 402741 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 402745 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 402748 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 402758 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 402784 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 402801 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 402867 1 . T scaffold2729 ScafM SNP 0009.scaffold00036 402875 1 G A scaffold2729 ScafM SNP 0009.scaffold00036 402887 2 AT GA scaffold2729 ScafM SNP 0009.scaffold00036 402894 1 C T scaffold2729 ScafM SNP 0009.scaffold00036 402899 1 T A scaffold2729 ScafM SNP 0009.scaffold00036 402912 1 C T scaffold2729 ScafM SNP 0009.scaffold00036 402916 1 G C scaffold2729 ScafM SNP 0009.scaffold00036 402936 1 C T scaffold2729 ScafM SNP 0009.scaffold00036 402946 2 CC TT scaffold2729 ScafM SNP 0009.scaffold00036 402955 1 A G scaffold2729 ScafM SNP 0009.scaffold00036 402963 1 A T scaffold2729 ScafM SNP 0009.scaffold00036 402994 1 G A scaffold2729 ScafM SNP 0009.scaffold00036 403007 1 T C scaffold2729 ScafM SNP 0009.scaffold00036 403010 1 G A scaffold2729 ScafM SNP 0009.scaffold00036 403012 1 G A scaffold2729 ScafM INDEL 0009.scaffold00036 403039 1 A . scaffold2729 ScafM INDEL 0009.scaffold00036 403059 1 A . scaffold2729 ScafM SNP 0009.scaffold00036 403067 1 A G scaffold2729 ScafM SNP 0009.scaffold00036 403070 1 G A scaffold2729 ScafM SNP 0009.scaffold00036 404495 1 G T scaffold32937 ScafM SNP 0009.scaffold00036 404508 1 C T scaffold32937 ScafM SNP 0009.scaffold00036 404512 1 A G scaffold32937 ScafM SNP 0009.scaffold00036 404521 1 T C scaffold32937 ScafM INDEL 0009.scaffold00036 404524 1 C . scaffold32937 ScafM INDEL 0009.scaffold00036 404542 1 A . scaffold32937 ScafM INDEL 0009.scaffold00036 404555 1 T . scaffold32937 ScafM SNP 0009.scaffold00036 404560 1 G A scaffold32937 ScafM SNP 0009.scaffold00036 404562 3 CAT GGC scaffold32937 ScafM SNP 0009.scaffold00036 404586 1 T A scaffold32937 ScafM SNP 0009.scaffold00036 404606 1 G T scaffold32937 ScafM SNP 0009.scaffold00036 404608 1 C A scaffold32937 ScafM SNP 0009.scaffold00036 404614 1 C A scaffold32937 ScafM SNP 0009.scaffold00036 404616 1 G A scaffold32937 ScafM INDEL 0009.scaffold00036 404623 1 T . scaffold32937 ScafM SNP 0009.scaffold00036 404625 1 A C scaffold32937 ScafM SNP 0009.scaffold00036 404641 2 TG CA scaffold32937 ScafM SNP 0009.scaffold00036 404647 1 G A scaffold32937 ScafM SNP 0009.scaffold00036 404672 1 C T scaffold32937 ScafM SNP 0009.scaffold00036 404693 1 C G scaffold32937 ScafM SNP 0009.scaffold00036 404698 1 C G scaffold32937 ScafM SNP 0009.scaffold00036 404748 2 CA TG scaffold32937 ScafM SNP 0009.scaffold00036 404753 1 C T scaffold32937 ScafM SNP 0009.scaffold00036 404759 1 G A scaffold32937 ScafM SNP 0009.scaffold00036 404762 2 GC AG scaffold32937 ScafM SNP 0009.scaffold00036 404767 2 TT CA scaffold32937 ScafM INDEL 0009.scaffold00036 404773 2 .. AA scaffold32937 ScafM SNP 0009.scaffold00036 404838 1 A T scaffold32937 ScafM SNP 0009.scaffold00036 404843 1 A G scaffold32937 ScafM SNP 0009.scaffold00036 404880 1 A G scaffold32937 ScafM SNP 0009.scaffold00036 404889 1 A G scaffold32937 ScafM SNP 0009.scaffold00036 404898 1 C T scaffold32937 ScafM SNP 0009.scaffold00036 404908 1 C A scaffold32937 ScafM SNP 0009.scaffold00036 404918 1 T G scaffold32937 ScafM SNP 0009.scaffold00036 404927 1 T A scaffold32937 ScafM SNP 0009.scaffold00036 404930 1 T A scaffold32937 ScafM SNP 0009.scaffold00036 406703 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 406707 1 . G scaffold2271 ScafM SNP 0009.scaffold00036 406713 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 406734 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 406744 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 406746 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 406756 1 C T scaffold2271 ReadM SNP 0009.scaffold00036 407004 1 A C - ReadM SNP 0009.scaffold00036 407049 1 A G - ReadM INDEL 0009.scaffold00036 407099 1 . T - ReadM SNP 0009.scaffold00036 407119 1 C T - ReadM SNP 0009.scaffold00036 407143 1 G C - ReadM SNP 0009.scaffold00036 407155 1 G C - ScafM SNP 0009.scaffold00036 407720 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 407735 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 407795 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 407807 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 407812 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 407821 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 407824 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 407850 1 G A scaffold2271 ScafM INDEL 0009.scaffold00036 407912 2 .. AG scaffold19389 ScafM SNP 0009.scaffold00036 407924 1 G A scaffold19389 ScafM INDEL 0009.scaffold00036 407931 1 G . scaffold19389 ScafM INDEL 0009.scaffold00036 407933 1 . T scaffold19389 ScafM SNP 0009.scaffold00036 407938 1 T A scaffold19389 ScafM SNP 0009.scaffold00036 407964 1 T A scaffold19389 ScafM INDEL 0009.scaffold00036 407992 2 CA .. scaffold19389 ScafM INDEL 0009.scaffold00036 407996 1 A . scaffold19389 ScafM INDEL 0009.scaffold00036 407998 1 A . scaffold19389 ScafM SNP 0009.scaffold00036 408053 1 A G scaffold19389 ScafM SNP 0009.scaffold00036 408055 1 C T scaffold19389 ScafM SNP 0009.scaffold00036 408057 1 C G scaffold19389 ReadM SNP 0009.scaffold00036 413351 1 T C - ReadM SNP 0009.scaffold00036 413479 1 A G - ReadM SNP 0009.scaffold00036 413516 1 T G - ScafM SNP 0009.scaffold00036 414875 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 414897 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 414911 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 414924 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 414930 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 414982 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 414988 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 415015 2 CA AT scaffold2271 ScafM SNP 0009.scaffold00036 415038 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415063 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 415081 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 415111 1 C A scaffold2271 ScafM INDEL 0009.scaffold00036 415119 5 ..... GTTAC scaffold2271 ScafM SNP 0009.scaffold00036 415149 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 415157 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 415162 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 415208 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 415214 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415227 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 415253 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 415279 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 415285 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 415586 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 415592 2 CA GG scaffold2271 ScafM SNP 0009.scaffold00036 415630 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415687 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 415700 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 415707 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 415737 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415758 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415764 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 415804 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 415829 1 A C scaffold2271 ScafM INDEL 0009.scaffold00036 415852 3 ... TTA scaffold2271 ScafM INDEL 0009.scaffold00036 415853 1 . C scaffold2271 ScafM SNP 0009.scaffold00036 415863 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 415866 5 ..... CTTGT scaffold2271 ScafM INDEL 0009.scaffold00036 415867 3 ... TTG scaffold2271 ScafM SNP 0009.scaffold00036 415869 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 415880 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415888 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 415901 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 415913 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 415924 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 415934 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 415958 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 415979 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 415984 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 415996 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 416004 2 GA CT scaffold2271 ScafM INDEL 0009.scaffold00036 416015 2 AA .G scaffold2271 ScafM SNP 0009.scaffold00036 416034 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 416042 1 C . scaffold2271 ScafM SNP 0009.scaffold00036 416045 1 A T scaffold2271 ScafM INDEL 0009.scaffold00036 416056 1 . G scaffold2271 ScafM SNP 0009.scaffold00036 416077 2 CA TG scaffold2271 ScafM INDEL 0009.scaffold00036 416089 6 ATTATT ...... scaffold2271 ScafM INDEL 0009.scaffold00036 416101 1 A . scaffold2271 ScafM INDEL 0009.scaffold00036 416159 3 ... ACA scaffold2271 ScafM INDEL 0009.scaffold00036 416170 2 .. TC scaffold2271 ScafM INDEL 0009.scaffold00036 416173 3 ... TCT scaffold2271 ScafM SNP 0009.scaffold00036 416198 1 C A scaffold2271 ScafM INDEL 0009.scaffold00036 416205 2 .. TT scaffold2271 ScafM INDEL 0009.scaffold00036 416218 2 AA .. scaffold2271 ScafM SNP 0009.scaffold00036 416250 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 416266 1 G . scaffold2271 ScafM SNP 0009.scaffold00036 416308 1 C A scaffold2271 ScafM INDEL 0009.scaffold00036 416318 4 ATGC .... scaffold2271 ScafM SNP 0009.scaffold00036 416357 1 A T scaffold2271 ScafM INDEL 0009.scaffold00036 416369 1 . C scaffold2271 ScafM INDEL 0009.scaffold00036 416371 1 . C scaffold2271 ScafM SNP 0009.scaffold00036 416394 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 416422 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 416429 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 416441 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 416869 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 416878 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 416891 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 416926 2 AT GG scaffold2271 ScafM SNP 0009.scaffold00036 416937 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 416944 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 416955 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 416958 1 G . scaffold2271 ScafM SNP 0009.scaffold00036 416960 1 C A scaffold2271 ReadM SNP 0009.scaffold00036 417734 1 C T - ScafM SNP 0009.scaffold00036 417845 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 417882 1 C T scaffold2271 ScafM INDEL 0009.scaffold00036 417954 3 TCT ... scaffold2271 ScafM INDEL 0009.scaffold00036 417993 1 G . scaffold2271 ScafM SNP 0009.scaffold00036 418282 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 418299 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 418307 1 T G scaffold2271 ScafM INDEL 0009.scaffold00036 418356 2 .. AA scaffold2271 ScafM SNP 0009.scaffold00036 418372 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 418378 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 418387 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 419721 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 419730 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 419752 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 419813 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 419855 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 419878 1 G C scaffold2271 ScafM INDEL 0009.scaffold00036 419933 1 . A scaffold2271 ScafM INDEL 0009.scaffold00036 419949 3 ... ACT scaffold2271 Both INDEL 0009.scaffold00036 420010 1 A . scaffold2271 ScafM INDEL 0009.scaffold00036 420100 6 TAGGCA ...... scaffold2271 ScafM INDEL 0009.scaffold00036 420138 7 ....... AGTTGTG scaffold2271 ScafM INDEL 0009.scaffold00036 420214 5 ACGCA ..... scaffold2271 ScafM SNP 0009.scaffold00036 420229 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 420238 1 G C scaffold2271 ScafM INDEL 0009.scaffold00036 420323 7 TACCTCA ....... scaffold2271 ScafM INDEL 0009.scaffold00036 420332 1 T . scaffold2271 ScafM INDEL 0009.scaffold00036 420335 10 CCAGTTTACT .......... scaffold2271 ScafM SNP 0009.scaffold00036 420348 1 C G scaffold2271 ScafM INDEL 0009.scaffold00036 420350 7 CATCCTC ....... scaffold2271 ScafM INDEL 0009.scaffold00036 420358 4 TCTT .... scaffold2271 ScafM SNP 0009.scaffold00036 420556 1 C T scaffold2271 ScafM INDEL 0009.scaffold00036 420612 5 ..... TTTGA scaffold2271 ReadM SNP 0009.scaffold00036 420684 1 G A - ScafM INDEL 0009.scaffold00036 420819 9 ......... TTTCTCTTT scaffold2271 ScafM INDEL 0009.scaffold00036 420830 1 . T scaffold2271 ScafM SNP 0009.scaffold00036 420873 1 G T scaffold2271 ScafM INDEL 0009.scaffold00036 420899 2 AT .. scaffold2271 ScafM SNP 0009.scaffold00036 420914 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 420919 1 T A scaffold2271 ReadM SNP 0009.scaffold00036 421379 1 T C - Both INDEL 0009.scaffold00036 421466 2 TT .. scaffold2271 ScafM SNP 0009.scaffold00036 421480 1 T A scaffold2271 Both SNP 0009.scaffold00036 421553 1 T C scaffold2271 Both SNP 0009.scaffold00036 421580 1 T A scaffold2271 Both SNP 0009.scaffold00036 421671 1 G C scaffold2271 Both SNP 0009.scaffold00036 421715 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 421740 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 422616 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 422780 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 422848 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 423206 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 423208 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 423229 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 423248 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 423268 2 TC CT scaffold2271 ScafM SNP 0009.scaffold00036 423276 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 423279 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 423377 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 423394 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 423404 2 TG AA scaffold2271 ScafM INDEL 0009.scaffold00036 423416 4 .... AAGC scaffold2271 ScafM SNP 0009.scaffold00036 423431 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 423463 1 C T scaffold2271 Both SNP 0009.scaffold00036 423505 1 C T scaffold2271 Both SNP 0009.scaffold00036 423550 1 A G scaffold2271 ReadM SNP 0009.scaffold00036 423604 1 T C - Both SNP 0009.scaffold00036 423702 1 T C scaffold2271 Both SNP 0009.scaffold00036 423724 1 G A scaffold2271 Both SNP 0009.scaffold00036 423788 1 G A scaffold2271 Both SNP 0009.scaffold00036 424039 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 424118 2 AT .. scaffold2271 ScafM SNP 0009.scaffold00036 424124 2 AG TA scaffold2271 ScafM SNP 0009.scaffold00036 424144 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 424189 1 C T scaffold2271 ScafM INDEL 0009.scaffold00036 424196 2 TT .. scaffold2271 ScafM SNP 0009.scaffold00036 424212 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 424243 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 424245 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 424254 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 424471 1 G A scaffold2271 ScafM INDEL 0009.scaffold00036 424508 3 TTG ... scaffold2271 ScafM SNP 0009.scaffold00036 424542 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 424554 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 424567 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 424581 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 424585 4 TCGA .... scaffold2271 ScafM SNP 0009.scaffold00036 424614 1 C A scaffold2271 ReadM SNP 0009.scaffold00036 424781 1 T C - ReadM SNP 0009.scaffold00036 424795 1 C T - ReadM SNP 0009.scaffold00036 425005 1 T C - ScafM SNP 0009.scaffold00036 425391 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 425407 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 425420 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 425432 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 425496 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 425550 2 TA AT scaffold2271 ReadM SNP 0009.scaffold00036 425802 1 T C - ReadM SNP 0009.scaffold00036 425948 1 C T - ReadM SNP 0009.scaffold00036 426176 1 T G - ReadM SNP 0009.scaffold00036 426331 1 T C - ReadM SNP 0009.scaffold00036 426335 1 A G - ReadM SNP 0009.scaffold00036 426358 1 C A - Both SNP 0009.scaffold00036 426442 1 C T scaffold2271 Both SNP 0009.scaffold00036 426455 1 A G scaffold2271 Both SNP 0009.scaffold00036 426471 1 A T scaffold2271 Both SNP 0009.scaffold00036 426507 1 A C scaffold2271 Both SNP 0009.scaffold00036 426597 1 G A scaffold2271 Both INDEL 0009.scaffold00036 426732 2 .. GT scaffold2271 Both SNP 0009.scaffold00036 426754 1 C A scaffold2271 Both SNP 0009.scaffold00036 426861 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 426875 1 T C scaffold2271 Both SNP 0009.scaffold00036 426946 1 C T scaffold2271 Both SNP 0009.scaffold00036 426989 1 C G scaffold2271 ScafM SNP 0009.scaffold00036 427003 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 427029 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 427047 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 427093 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 427097 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 427105 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 427109 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 427132 1 C G scaffold2271 Both SNP 0009.scaffold00036 427207 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 427317 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 427430 1 G T scaffold2271 ReadM SNP 0009.scaffold00036 427608 1 G A - ReadM SNP 0009.scaffold00036 427671 1 G A - ScafM INDEL 0009.scaffold00036 427756 4 .... TAGC scaffold2271 ScafM SNP 0009.scaffold00036 427810 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 427832 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 427856 1 A G scaffold2271 ScafM INDEL 0009.scaffold00036 427875 4 .... TTAT scaffold2271 ScafM SNP 0009.scaffold00036 427898 1 T C scaffold2271 Both SNP 0009.scaffold00036 427975 1 A G scaffold2271 Both SNP 0009.scaffold00036 428007 1 C T scaffold2271 Both SNP 0009.scaffold00036 428081 1 A G scaffold2271 Both SNP 0009.scaffold00036 428153 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 428364 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 428400 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 428420 1 G A scaffold2271 Both SNP 0009.scaffold00036 428433 1 T G scaffold2271 Both SNP 0009.scaffold00036 428480 1 G C scaffold2271 Both SNP 0009.scaffold00036 428504 1 A G scaffold2271 Both SNP 0009.scaffold00036 428591 1 C A scaffold2271 Both SNP 0009.scaffold00036 428596 1 A G scaffold2271 Both SNP 0009.scaffold00036 428626 1 G A scaffold2271 Both SNP 0009.scaffold00036 428655 1 A G scaffold2271 Both SNP 0009.scaffold00036 428675 1 T C scaffold2271 Both SNP 0009.scaffold00036 428713 1 G A scaffold2271 Both SNP 0009.scaffold00036 428799 1 A G scaffold2271 ReadM SNP 0009.scaffold00036 428900 1 C T - ReadM SNP 0009.scaffold00036 428902 1 G A - ReadM SNP 0009.scaffold00036 429182 1 T C - ReadM SNP 0009.scaffold00036 429200 1 A G - Both SNP 0009.scaffold00036 429410 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 429587 1 G T scaffold2271 ScafM INDEL 0009.scaffold00036 429611 1 T . scaffold2271 ScafM SNP 0009.scaffold00036 429633 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 429654 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 429743 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 429759 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 429770 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 429789 1 A G scaffold2271 Both SNP 0009.scaffold00036 429833 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 429904 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 429910 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 429922 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 430052 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 430069 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 430090 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 430092 1 T G scaffold2271 Both SNP 0009.scaffold00036 430170 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 430295 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 430297 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 430303 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 430697 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 430699 1 A G scaffold2271 Both SNP 0009.scaffold00036 430735 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 430788 1 T C scaffold2271 ScafM INDEL 0009.scaffold00036 430820 2 AT .. scaffold2271 ScafM SNP 0009.scaffold00036 431136 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 431138 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 431150 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 431153 1 T A scaffold2271 ScafM SNP 0009.scaffold00036 431269 1 T G scaffold2271 ScafM SNP 0009.scaffold00036 431298 1 C A scaffold2271 ScafM SNP 0009.scaffold00036 431459 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 431467 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 431490 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 431516 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 431554 2 CA TG scaffold2271 ScafM SNP 0009.scaffold00036 431582 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 431594 1 C A scaffold2271 ReadM SNP 0009.scaffold00036 431749 1 C T - ReadM SNP 0009.scaffold00036 431770 1 T G - ScafM SNP 0009.scaffold00036 432340 1 T A scaffold12345 ScafM SNP 0009.scaffold00036 432453 1 T C scaffold12345 ScafM SNP 0009.scaffold00036 432465 1 G A scaffold12345 ScafM INDEL 0009.scaffold00036 432473 2 .. AT scaffold12345 ScafM SNP 0009.scaffold00036 432478 1 C A scaffold12345 ScafM SNP 0009.scaffold00036 432499 1 G T scaffold12345 ReadM SNP 0009.scaffold00036 433281 1 C T - ReadM SNP 0009.scaffold00036 433310 1 T C - ReadM SNP 0009.scaffold00036 433329 1 G C - ReadM SNP 0009.scaffold00036 434781 1 A G - ReadM SNP 0009.scaffold00036 434873 1 G A - Both SNP 0009.scaffold00036 434888 1 C T scaffold9686 ScafM SNP 0009.scaffold00036 434926 1 C G scaffold9686 ScafM SNP 0009.scaffold00036 434931 1 G A scaffold9686 ScafM SNP 0009.scaffold00036 434992 1 T C scaffold9686 ScafM SNP 0009.scaffold00036 435004 1 A T scaffold9686 ScafM SNP 0009.scaffold00036 435018 1 C T scaffold9686 ScafM SNP 0009.scaffold00036 435026 1 G A scaffold9686 ScafM SNP 0009.scaffold00036 435868 1 T C scaffold8387 ScafM SNP 0009.scaffold00036 435888 1 T C scaffold8387 ScafM SNP 0009.scaffold00036 435897 1 C T scaffold8387 ScafM SNP 0009.scaffold00036 435928 1 T G scaffold8387 ScafM SNP 0009.scaffold00036 435931 1 A C scaffold8387 ScafM SNP 0009.scaffold00036 435960 1 G T scaffold8387 ScafM SNP 0009.scaffold00036 435966 1 C A scaffold8387 ScafM SNP 0009.scaffold00036 436006 1 A G scaffold8387 ScafM SNP 0009.scaffold00036 436018 1 A T scaffold8387 ScafM SNP 0009.scaffold00036 436052 1 G T scaffold8387 ScafM SNP 0009.scaffold00036 436057 1 G A scaffold8387 ScafM SNP 0009.scaffold00036 436070 1 C T scaffold8387 ScafM SNP 0009.scaffold00036 436074 1 C T scaffold8387 ScafM SNP 0009.scaffold00036 436080 1 T A scaffold8387 ScafM SNP 0009.scaffold00036 436083 2 CT TC scaffold8387 ScafM SNP 0009.scaffold00036 436096 1 A T scaffold8387 ScafM SNP 0009.scaffold00036 436104 1 T G scaffold8387 ScafM SNP 0009.scaffold00036 436117 1 G A scaffold8387 ScafM SNP 0009.scaffold00036 436128 1 T G scaffold8387 ScafM SNP 0009.scaffold00036 436141 1 A G scaffold8387 ScafM SNP 0009.scaffold00036 436152 1 G A scaffold8387 ScafM SNP 0009.scaffold00036 436165 1 T C scaffold8387 ScafM SNP 0009.scaffold00036 436168 1 G A scaffold8387 ScafM SNP 0009.scaffold00036 436180 1 C T scaffold8387 ScafM SNP 0009.scaffold00036 436187 1 T C scaffold8387 ScafM SNP 0009.scaffold00036 437209 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 437227 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 437248 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 437307 1 G T scaffold2271 ScafM INDEL 0009.scaffold00036 437309 1 A . scaffold2271 ScafM SNP 0009.scaffold00036 437323 1 G C scaffold2271 ScafM SNP 0009.scaffold00036 437370 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 437420 1 C T scaffold2271 Both SNP 0009.scaffold00036 437466 1 A G scaffold2271 Both SNP 0009.scaffold00036 437610 1 T C scaffold2271 Both SNP 0009.scaffold00036 437621 1 A T scaffold2271 Both SNP 0009.scaffold00036 437626 1 A T scaffold2271 Both INDEL 0009.scaffold00036 437687 1 A . scaffold2271 ScafM INDEL 0009.scaffold00036 437761 17 ................. CTTTAATTTTTTATTTT scaffold2271 Both SNP 0009.scaffold00036 437839 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 437899 1 C G scaffold2271 ScafM INDEL 0009.scaffold00036 437913 2 .. TT scaffold2271 ScafM SNP 0009.scaffold00036 437918 1 A T scaffold2271 ScafM SNP 0009.scaffold00036 437975 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 437986 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 437992 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 438011 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 438017 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 438057 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 438060 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 438076 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 438100 1 A C scaffold2271 ScafM SNP 0009.scaffold00036 438118 1 C T scaffold2271 ScafM SNP 0009.scaffold00036 438124 1 A G scaffold2271 ScafM SNP 0009.scaffold00036 438143 1 G T scaffold2271 ScafM SNP 0009.scaffold00036 438207 1 G A scaffold2271 ScafM SNP 0009.scaffold00036 438219 1 T C scaffold2271 ScafM SNP 0009.scaffold00036 438382 2 TT AA scaffold2271 ScafM INDEL 0009.scaffold00036 438497 1 A . scaffold2271 ScafM SNP 0009.scaffold00036 438502 2 TA AT scaffold2271 ScafM SNP 0009.scaffold00036 439002 1 T G scaffold2271 Both SNP 0009.scaffold00036 439050 1 T C scaffold2271 ReadM SNP 0009.scaffold00036 439067 1 G T - ReadM INDEL 0009.scaffold00036 439440 1 . C - ReadM SNP 0009.scaffold00036 439452 1 T C - ReadM SNP 0009.scaffold00036 439517 1 A T - ReadM SNP 0009.scaffold00036 439617 1 T G - ReadM INDEL 0009.scaffold00036 439780 2 .. CA - ReadM SNP 0009.scaffold00036 440019 1 G A - ReadM SNP 0009.scaffold00036 440163 1 A C - ReadM SNP 0009.scaffold00036 440317 1 G A - ReadM SNP 0009.scaffold00036 440359 1 C A - ReadM SNP 0009.scaffold00036 440453 1 G A - ReadM SNP 0009.scaffold00036 440482 1 T C - ReadM SNP 0009.scaffold00036 440526 1 C T - ReadM SNP 0009.scaffold00036 440546 1 G A - ReadM SNP 0009.scaffold00036 440574 1 C T - ReadM SNP 0009.scaffold00036 440596 1 G A - ReadM SNP 0009.scaffold00036 440634 1 C G - ReadM SNP 0009.scaffold00036 440688 1 T G - ReadM SNP 0009.scaffold00036 440861 1 C T - ScafM SNP 0009.scaffold00036 443856 1 A T scaffold25254 ScafM SNP 0009.scaffold00036 443887 1 T A scaffold25254 ScafM SNP 0009.scaffold00036 443915 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 444439 1 A T scaffold25254 ScafM SNP 0009.scaffold00036 444448 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 444451 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 444538 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 444564 1 A T scaffold25254 ScafM SNP 0009.scaffold00036 444601 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 444632 1 T C scaffold25254 ScafM SNP 0009.scaffold00036 444656 1 G A scaffold25254 ScafM SNP 0009.scaffold00036 444661 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 444713 1 C G scaffold25254 ScafM SNP 0009.scaffold00036 444858 1 A T scaffold25254 ScafM INDEL 0009.scaffold00036 444890 1 . T scaffold25254 ScafM SNP 0009.scaffold00036 444904 2 AT TG scaffold25254 ScafM SNP 0009.scaffold00036 444945 1 G A scaffold25254 ScafM SNP 0009.scaffold00036 444962 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 444981 1 G A scaffold25254 ScafM SNP 0009.scaffold00036 445025 1 T A scaffold25254 ScafM INDEL 0009.scaffold00036 445045 5 ..... CAAGG scaffold25254 ScafM INDEL 0009.scaffold00036 445046 2 .. CA scaffold25254 ScafM INDEL 0009.scaffold00036 445047 5 ..... AAACC scaffold25254 ScafM INDEL 0009.scaffold00036 445048 2 .. GC scaffold25254 ScafM SNP 0009.scaffold00036 445111 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 446897 1 T C scaffold25254 ScafM SNP 0009.scaffold00036 446909 2 GA AG scaffold25254 ScafM SNP 0009.scaffold00036 446938 1 C G scaffold25254 ScafM SNP 0009.scaffold00036 446941 1 G A scaffold25254 ScafM INDEL 0009.scaffold00036 447374 5 ..... ATTGC scaffold25254 ScafM SNP 0009.scaffold00036 447390 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 447656 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 447681 1 A T scaffold25254 ScafM SNP 0009.scaffold00036 447721 1 A G scaffold25254 ScafM SNP 0009.scaffold00036 447773 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 450573 1 T G scaffold25254 ScafM SNP 0009.scaffold00036 450606 1 C A scaffold25254 ScafM INDEL 0009.scaffold00036 450699 2 .. AT scaffold25254 ScafM SNP 0009.scaffold00036 450725 1 C T scaffold25254 ScafM SNP 0009.scaffold00036 451727 1 T A scaffold20827 Both SNP 0009.scaffold00036 451951 1 A G scaffold20827 Both SNP 0009.scaffold00036 451965 1 G A scaffold20827 Both SNP 0009.scaffold00036 451974 1 T C scaffold20827 Both SNP 0009.scaffold00036 452050 1 A G scaffold20827 Both SNP 0009.scaffold00036 452077 1 C T scaffold20827 Both SNP 0009.scaffold00036 452084 1 G A scaffold20827 Both SNP 0009.scaffold00036 452191 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 452200 1 A T scaffold20827 ScafM SNP 0009.scaffold00036 452222 1 G A scaffold20827 ScafM SNP 0009.scaffold00036 452251 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 452275 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 452284 1 T G scaffold20827 ScafM SNP 0009.scaffold00036 452331 1 T C scaffold20827 ScafM SNP 0009.scaffold00036 452350 1 A T scaffold20827 Both SNP 0009.scaffold00036 452466 1 G A scaffold20827 ReadM SNP 0009.scaffold00036 453659 1 A G - ReadM SNP 0009.scaffold00036 453724 1 A C - ReadM SNP 0009.scaffold00036 453731 1 T A - ReadM SNP 0009.scaffold00036 453920 1 A G - ReadM SNP 0009.scaffold00036 454017 1 G A - ReadM SNP 0009.scaffold00036 454065 1 G C - ReadM SNP 0009.scaffold00036 454068 1 C T - Both SNP 0009.scaffold00036 454231 1 C T scaffold20827 Both SNP 0009.scaffold00036 454250 1 A C scaffold20827 Both SNP 0009.scaffold00036 454367 1 T C scaffold20827 Both INDEL 0009.scaffold00036 454450 1 T . scaffold20827 ScafM SNP 0009.scaffold00036 454465 1 A C scaffold20827 ScafM SNP 0009.scaffold00036 454502 1 T C scaffold20827 Both SNP 0009.scaffold00036 454579 1 A T scaffold20827 ReadM SNP 0009.scaffold00036 454761 1 G A - ReadM SNP 0009.scaffold00036 454766 1 A G - ReadM SNP 0009.scaffold00036 454829 1 C G - Both INDEL 0009.scaffold00036 454972 1 A . scaffold20827 ReadM SNP 0009.scaffold00036 455306 1 C G - ReadM SNP 0009.scaffold00036 455324 1 A G - ReadM SNP 0009.scaffold00036 455483 1 A G - ReadM SNP 0009.scaffold00036 455500 1 C A - Both SNP 0009.scaffold00036 455706 1 A C scaffold20827 Both SNP 0009.scaffold00036 455721 1 T C scaffold20827 Both SNP 0009.scaffold00036 455779 1 A C scaffold20827 Both SNP 0009.scaffold00036 455804 1 G A scaffold20827 ScafM SNP 0009.scaffold00036 455869 2 GT TA scaffold20827 ScafM SNP 0009.scaffold00036 455888 1 T G scaffold20827 ScafM SNP 0009.scaffold00036 455894 1 C G scaffold20827 ScafM SNP 0009.scaffold00036 455900 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 455915 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 455951 1 C A scaffold20827 ScafM SNP 0009.scaffold00036 455960 1 T C scaffold20827 ScafM SNP 0009.scaffold00036 455980 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 455995 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 456000 1 T G scaffold20827 ScafM SNP 0009.scaffold00036 456010 1 C T scaffold20827 Both SNP 0009.scaffold00036 456051 1 T A scaffold20827 Both SNP 0009.scaffold00036 456091 1 T A scaffold20827 Both SNP 0009.scaffold00036 456147 1 C T scaffold20827 Both SNP 0009.scaffold00036 456226 1 C T scaffold20827 Both SNP 0009.scaffold00036 456239 1 C A scaffold20827 Both SNP 0009.scaffold00036 456281 1 T C scaffold20827 Both SNP 0009.scaffold00036 456351 1 A G scaffold20827 Both SNP 0009.scaffold00036 456373 1 G A scaffold20827 ReadM SNP 0009.scaffold00036 456493 1 C A - ReadM SNP 0009.scaffold00036 456519 1 G T - ReadM SNP 0009.scaffold00036 456563 1 T C - ReadM SNP 0009.scaffold00036 456576 1 T A - ReadM SNP 0009.scaffold00036 456600 1 G A - ReadM SNP 0009.scaffold00036 456758 1 C T - ReadM SNP 0009.scaffold00036 456831 1 G A - ReadM SNP 0009.scaffold00036 456965 1 T C - Both SNP 0009.scaffold00036 457045 1 C T scaffold20827 Both SNP 0009.scaffold00036 457050 1 G C scaffold20827 Both SNP 0009.scaffold00036 457066 1 T C scaffold20827 Both SNP 0009.scaffold00036 457335 1 G T scaffold20827 Both SNP 0009.scaffold00036 457346 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 457380 1 A C scaffold20827 ScafM SNP 0009.scaffold00036 457383 1 G C scaffold20827 Both SNP 0009.scaffold00036 457451 1 G C scaffold20827 Both SNP 0009.scaffold00036 457471 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 457528 1 T A scaffold20827 Both SNP 0009.scaffold00036 457584 1 G A scaffold20827 ScafM SNP 0009.scaffold00036 457693 2 GA TG scaffold20827 Both SNP 0009.scaffold00036 457739 1 A T scaffold20827 ScafM SNP 0009.scaffold00036 457752 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 457781 1 C A scaffold20827 ScafM SNP 0009.scaffold00036 457798 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 457803 1 C T scaffold20827 Both SNP 0009.scaffold00036 457823 1 T C scaffold20827 Both SNP 0009.scaffold00036 457834 1 T C scaffold20827 Both SNP 0009.scaffold00036 457925 1 T C scaffold20827 Both SNP 0009.scaffold00036 457949 1 T C scaffold20827 Both SNP 0009.scaffold00036 458007 1 G A scaffold20827 Both SNP 0009.scaffold00036 458020 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 458045 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 458060 1 C A scaffold20827 ScafM INDEL 0009.scaffold00036 458079 4 GTCT .... scaffold20827 ScafM SNP 0009.scaffold00036 458085 1 A T scaffold20827 ScafM SNP 0009.scaffold00036 458099 1 T G scaffold20827 ReadM SNP 0009.scaffold00036 458119 1 T G - ReadM SNP 0009.scaffold00036 458173 1 A G - ReadM SNP 0009.scaffold00036 458292 1 G A - ReadM SNP 0009.scaffold00036 458342 1 C T - Both SNP 0009.scaffold00036 458415 1 C A scaffold20827 Both SNP 0009.scaffold00036 458458 1 C T scaffold20827 ReadM SNP 0009.scaffold00036 459079 1 A C - ScafM SNP 0009.scaffold00036 459168 1 C G scaffold20827 Both SNP 0009.scaffold00036 459291 1 T C scaffold20827 ReadM SNP 0009.scaffold00036 459405 1 T C - Both SNP 0009.scaffold00036 459559 1 A T scaffold20827 ScafM INDEL 0009.scaffold00036 459779 8 ATTTTTTA ........ scaffold20827 ScafM INDEL 0009.scaffold00036 459881 85 ATCATGGCTCTTCCTGTAACTTTGCCTCTTCTTCCTACTACTATTACAACAACAGAATTAAGCAGCTTAGGTTGGTTTTTCCCCC ..................................................................................... scaffold20827 ScafM INDEL 0009.scaffold00036 460236 12 ............ ACAACAACAACA scaffold20827 ScafM SNP 0009.scaffold00036 460379 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 460487 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 460501 1 T C scaffold20827 ScafM INDEL 0009.scaffold00036 460534 5 AAGTA ..... scaffold20827 ScafM INDEL 0009.scaffold00036 460541 1 T . scaffold20827 ScafM INDEL 0009.scaffold00036 460543 1 T . scaffold20827 ScafM SNP 0009.scaffold00036 460565 1 G T scaffold20827 ScafM INDEL 0009.scaffold00036 460593 2 AA .. scaffold20827 Both SNP 0009.scaffold00036 460816 1 G T scaffold20827 ScafM SNP 0009.scaffold00036 460884 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 461112 1 C G scaffold20827 Both SNP 0009.scaffold00036 461162 1 T C scaffold20827 Both SNP 0009.scaffold00036 461206 1 C T scaffold20827 ScafM SNP 0009.scaffold00036 461327 1 A G scaffold20827 Both SNP 0009.scaffold00036 461365 1 A G scaffold20827 ScafM SNP 0009.scaffold00036 461383 1 T G scaffold20827 ScafM INDEL 0009.scaffold00036 461474 4 TTTT .... scaffold20827 ScafM SNP 0009.scaffold00036 461553 1 G A scaffold20827 ScafM SNP 0009.scaffold00036 462413 1 T A scaffold20827 ScafM INDEL 0009.scaffold00036 462479 1 . T scaffold20827 ScafM SNP 0009.scaffold00036 462565 1 C T scaffold20827 ScafM INDEL 0009.scaffold00036 462784 1 . A scaffold20827 ScafM INDEL 0009.scaffold00036 463020 1 G . scaffold20827 ScafM INDEL 0009.scaffold00036 463063 2 AT .. scaffold20827 Both SNP 0009.scaffold00036 463309 1 A G scaffold20827 ScafM INDEL 0009.scaffold00036 463849 4 TACA .... scaffold20827 Both SNP 0009.scaffold00036 476719 1 A G scaffold5425 Both SNP 0009.scaffold00036 476734 1 A T scaffold5425 Both SNP 0009.scaffold00036 476776 1 G A scaffold5425 ScafM INDEL 0009.scaffold00036 502181 5 ..... AAAAA scaffold5425 ScafM INDEL 0009.scaffold00036 502186 1 A . scaffold5425 ScafM INDEL 0009.scaffold00036 508065 1 . A scaffold5425 ScafM INDEL 0009.scaffold00036 525079 2 TA .. scaffold5425 ScafM SNP 0009.scaffold00036 557518 1 T C scaffold7721 ScafM SNP 0009.scaffold00036 581395 3 GAG ATT scaffold7721 ScafM SNP 0009.scaffold00036 581402 2 AA TT scaffold7721 ScafM INDEL 0009.scaffold00036 581407 2 CC .. scaffold7721 ScafM SNP 0009.scaffold00036 615699 1 C A scaffold10160 ScafM INDEL 0009.scaffold00036 623362 1 . A scaffold10160 ReadM INDEL 0009.scaffold00036 624867 1 . A - ScafM SNP 0009.scaffold00036 635430 1 A T scaffold10160 ScafM SNP 0009.scaffold00036 644895 1 T C scaffold1915 ReadM INDEL 0009.scaffold00036 683633 1 A . - ScafM INDEL 0009.scaffold00036 692893 15 ............... GTTGGGGGGGGGGGG scaffold5810 ScafM INDEL 0009.scaffold00036 696943 1 G . scaffold5810 ScafM SNP 0010.scaffold00043 174 1 A G scaffold5457 ScafM INDEL 0010.scaffold00043 208 16 CGAAGTTGATATGGGC ................ scaffold5457 ScafM INDEL 0010.scaffold00043 325 4 .... CGAT scaffold5457 ScafM INDEL 0010.scaffold00043 352 6 GCAGCT ...... scaffold5457 ScafM INDEL 0010.scaffold00043 359 3 TGG ... scaffold5457 ScafM SNP 0010.scaffold00043 379 1 G A scaffold5457 ScafM SNP 0010.scaffold00043 391 1 T C scaffold5457 ScafM SNP 0010.scaffold00043 412 1 T C scaffold5457 ScafM SNP 0010.scaffold00043 439 1 C T scaffold5457 ScafM INDEL 0010.scaffold00043 507 6 AGTAAA ...... scaffold5457 ScafM INDEL 0010.scaffold00043 528 35 AGTTTGAGCTTTATATTGAGACTTGAAAAAATGTG ................................... scaffold5457 ScafM SNP 0010.scaffold00043 602 1 G A scaffold5457 ScafM SNP 0010.scaffold00043 665 1 A C scaffold5457 ScafM SNP 0010.scaffold00043 697 1 G A scaffold5457 ScafM INDEL 0010.scaffold00043 702 1 A . scaffold5457 ScafM SNP 0010.scaffold00043 1139 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 1153 1 C G scaffold4238 ScafM INDEL 0010.scaffold00043 1185 7 TCATAAG ....... scaffold4238 ScafM SNP 0010.scaffold00043 1217 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 1602 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 1615 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 1635 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 1637 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 1643 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 1667 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 1698 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 1766 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 1771 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 1779 2 TA CG scaffold4238 ScafM SNP 0010.scaffold00043 1793 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 1804 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 1840 1 G T scaffold4238 ScafM SNP 0010.scaffold00043 1843 1 G T scaffold4238 ScafM INDEL 0010.scaffold00043 1855 2 TT .. scaffold4238 ScafM INDEL 0010.scaffold00043 1869 13 AAATGCAACGGGT ............. scaffold4238 ScafM SNP 0010.scaffold00043 1888 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 1928 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 1934 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 1936 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 1961 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 1969 2 CA TC scaffold4238 ScafM SNP 0010.scaffold00043 1988 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 1996 1 C . scaffold4238 ScafM SNP 0010.scaffold00043 2036 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 2042 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 2071 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 2121 2 AG CA scaffold4238 ScafM INDEL 0010.scaffold00043 2168 2 TT .. scaffold4238 ScafM INDEL 0010.scaffold00043 2171 2 AC .. scaffold4238 ScafM SNP 0010.scaffold00043 2174 1 T A scaffold4238 ScafM INDEL 0010.scaffold00043 2176 1 C . scaffold4238 ScafM INDEL 0010.scaffold00043 2178 1 C . scaffold4238 ScafM SNP 0010.scaffold00043 2214 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 2217 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 2244 8 TGGTTTTC ........ scaffold4238 ScafM SNP 0010.scaffold00043 2255 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 2268 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 2288 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 2297 2 AC GT scaffold4238 ScafM SNP 0010.scaffold00043 2307 1 C T scaffold4238 Both SNP 0010.scaffold00043 2362 1 T G scaffold4238 Both SNP 0010.scaffold00043 2392 1 A G scaffold4238 Both SNP 0010.scaffold00043 2412 1 T G scaffold4238 Both SNP 0010.scaffold00043 2470 1 A G scaffold4238 Both SNP 0010.scaffold00043 2998 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 3338 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 3629 1 T A scaffold4238 ScafM INDEL 0010.scaffold00043 3634 2 CA .G scaffold4238 ScafM SNP 0010.scaffold00043 3639 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 3666 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 3694 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 3696 1 C A scaffold4238 ScafM INDEL 0010.scaffold00043 3707 1 . C scaffold4238 ScafM SNP 0010.scaffold00043 3714 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 3719 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 3724 8 TCATAACT ........ scaffold4238 ScafM SNP 0010.scaffold00043 3784 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 3800 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 3802 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 3817 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 3849 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 3875 7 ....... AAATAGT scaffold4238 ScafM SNP 0010.scaffold00043 3877 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 3891 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 3894 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 3905 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 3937 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 3941 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 3944 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 3950 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 3972 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 3975 2 .. AT scaffold4238 ScafM INDEL 0010.scaffold00043 3992 2 .C TA scaffold4238 ScafM SNP 0010.scaffold00043 3995 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 4005 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4023 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4045 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 4496 1 T . scaffold4238 ScafM INDEL 0010.scaffold00043 4506 7 TCTCGAT ....... scaffold4238 ScafM SNP 0010.scaffold00043 4522 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4525 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 4545 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 4551 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 4561 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 4582 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 4593 6 GCGTTA ...... scaffold4238 ScafM SNP 0010.scaffold00043 4630 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 4650 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 4665 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4669 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 4700 9 ACATGCATA ......... scaffold4238 ScafM SNP 0010.scaffold00043 4717 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4754 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 4764 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 4766 2 GT CC scaffold4238 ScafM SNP 0010.scaffold00043 4785 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 4801 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 4814 3 CCA ... scaffold4238 ScafM SNP 0010.scaffold00043 4822 2 TG AC scaffold4238 ScafM SNP 0010.scaffold00043 4825 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 4828 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 4844 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 4848 1 . C scaffold4238 ScafM SNP 0010.scaffold00043 4850 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 4852 2 CC TG scaffold4238 ScafM INDEL 0010.scaffold00043 4855 2 TA .G scaffold4238 ScafM INDEL 0010.scaffold00043 4864 1 . A scaffold4238 ScafM INDEL 0010.scaffold00043 4869 1 C . scaffold4238 ScafM SNP 0010.scaffold00043 4888 1 C G scaffold4238 ScafM INDEL 0010.scaffold00043 4896 6 ...... TAGTGG scaffold4238 ScafM INDEL 0010.scaffold00043 4898 1 . C scaffold4238 ScafM INDEL 0010.scaffold00043 4899 1 . T scaffold4238 ScafM INDEL 0010.scaffold00043 4901 3 ... TCT scaffold4238 ScafM SNP 0010.scaffold00043 4904 1 G T scaffold4238 ScafM INDEL 0010.scaffold00043 4907 9 ......... ACCAACCAC scaffold4238 ScafM INDEL 0010.scaffold00043 4910 4 .... TATC scaffold4238 ScafM SNP 0010.scaffold00043 4912 2 CT AA scaffold4238 ScafM INDEL 0010.scaffold00043 4917 3 .GT CAG scaffold4238 ScafM INDEL 0010.scaffold00043 4921 3 ... AGA scaffold4238 ScafM INDEL 0010.scaffold00043 4923 3 ... AAC scaffold4238 ScafM SNP 0010.scaffold00043 4926 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 4929 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 4931 2 CA TG scaffold4238 ScafM SNP 0010.scaffold00043 4934 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 4951 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 4960 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 4967 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 4982 2 CC TG scaffold4238 ScafM SNP 0010.scaffold00043 4989 1 G T scaffold4238 ScafM INDEL 0010.scaffold00043 4999 1 . A scaffold4238 ScafM SNP 0010.scaffold00043 5007 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 5090 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 5094 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 5098 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 5120 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 5140 1 . T scaffold4238 ScafM SNP 0010.scaffold00043 5164 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 5177 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 5205 3 ... TAA scaffold4238 ScafM SNP 0010.scaffold00043 5207 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 5218 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 5226 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 5229 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 5244 4 .... AATG scaffold4238 ScafM INDEL 0010.scaffold00043 5248 3 ... AAC scaffold4238 ScafM SNP 0010.scaffold00043 5261 2 CG TT scaffold4238 ScafM INDEL 0010.scaffold00043 5276 2 TG .. scaffold4238 ScafM SNP 0010.scaffold00043 5284 1 C G scaffold4238 ScafM INDEL 0010.scaffold00043 5650 1 . G scaffold4238 ScafM SNP 0010.scaffold00043 5652 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 5661 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 5670 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 5885 1 . C scaffold4238 ScafM SNP 0010.scaffold00043 6476 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 6481 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 6487 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 6869 4 CTCT .... scaffold4238 ScafM INDEL 0010.scaffold00043 6898 1 . T scaffold4238 ScafM SNP 0010.scaffold00043 6931 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 6973 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 6975 1 G T scaffold4238 ScafM SNP 0010.scaffold00043 6983 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 6999 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 7031 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 7036 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 7038 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 7095 2 AC GA scaffold4238 ScafM SNP 0010.scaffold00043 7129 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 7133 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 7139 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 7143 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 7149 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 7153 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 7161 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 7183 2 GC AA scaffold4238 ScafM SNP 0010.scaffold00043 7210 2 TC CT scaffold4238 ScafM SNP 0010.scaffold00043 7260 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 7273 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 7275 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 7296 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 7526 2 GC TG scaffold4238 ScafM INDEL 0010.scaffold00043 7531 1 G . scaffold4238 ScafM SNP 0010.scaffold00043 7550 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 7594 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 7636 1 . T scaffold4238 ScafM INDEL 0010.scaffold00043 7666 2 TA .. scaffold4238 ScafM SNP 0010.scaffold00043 7688 1 T G scaffold4238 ScafM INDEL 0010.scaffold00043 8089 1 . A scaffold4238 ScafM SNP 0010.scaffold00043 8116 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 8125 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 8667 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 8674 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 9137 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 9164 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 9187 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 9199 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 9975 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 9977 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 10012 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 10104 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 10108 3 ... TAA scaffold4238 ScafM SNP 0010.scaffold00043 10126 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 10137 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 10141 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 10249 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 10259 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 10265 3 ... AAT scaffold4238 ScafM SNP 0010.scaffold00043 10273 1 G C scaffold4238 ReadM SNP 0010.scaffold00043 10375 1 T C - ReadM SNP 0010.scaffold00043 10423 1 G A - ReadM INDEL 0010.scaffold00043 10441 1 A . - ScafM SNP 0010.scaffold00043 10530 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 10542 1 . G scaffold4238 ScafM SNP 0010.scaffold00043 10606 1 G C scaffold4238 ScafM INDEL 0010.scaffold00043 10625 1 . A scaffold4238 ScafM INDEL 0010.scaffold00043 10628 5 ..... TGAAT scaffold4238 ScafM SNP 0010.scaffold00043 10637 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 10689 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 10745 2 CC TT scaffold4238 ScafM SNP 0010.scaffold00043 10749 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 10759 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 10761 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 10774 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 10781 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 10805 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 10816 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 10821 2 AT TA scaffold4238 ScafM SNP 0010.scaffold00043 10850 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11201 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 11642 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11645 1 G T scaffold4238 ScafM SNP 0010.scaffold00043 11659 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11664 1 C A scaffold4238 ScafM INDEL 0010.scaffold00043 11689 3 ..C TTA scaffold4238 ScafM SNP 0010.scaffold00043 11701 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 11703 2 CG TT scaffold4238 ScafM SNP 0010.scaffold00043 11708 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11726 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 11748 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 11764 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 11777 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 11780 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 11785 1 T G scaffold4238 ScafM INDEL 0010.scaffold00043 11787 1 . C scaffold4238 ScafM SNP 0010.scaffold00043 11791 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11804 1 T G scaffold4238 ScafM INDEL 0010.scaffold00043 11828 12 ............ TGAAAGGTATTA scaffold4238 ScafM SNP 0010.scaffold00043 11842 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 11847 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 11859 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 11879 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 11908 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 11916 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 11920 2 AT GA scaffold4238 ScafM SNP 0010.scaffold00043 11923 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 11927 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 13110 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 13134 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 13136 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 13155 12 ............ ATAGAAATACCC scaffold4238 ScafM INDEL 0010.scaffold00043 13156 16 ................ CAAAAAAAAAAAAAAC scaffold4238 ScafM SNP 0010.scaffold00043 13162 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 13237 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 13247 8 TCAGCAAG ........ scaffold4238 ScafM SNP 0010.scaffold00043 13289 1 T A scaffold4238 ReadM INDEL 0010.scaffold00043 13470 1 . T - ReadM SNP 0010.scaffold00043 13518 1 C A - ReadM SNP 0010.scaffold00043 13535 1 C T - ReadM SNP 0010.scaffold00043 13599 1 G T - ScafM INDEL 0010.scaffold00043 13670 7 AGTTAAA ....... scaffold4238 ScafM INDEL 0010.scaffold00043 13962 4 .... ATTA scaffold4238 Both SNP 0010.scaffold00043 14110 1 A G scaffold4238 Both SNP 0010.scaffold00043 14212 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 14285 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 14304 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 14309 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 14322 1 C T scaffold4238 Both SNP 0010.scaffold00043 14373 1 T C scaffold4238 Both INDEL 0010.scaffold00043 14375 1 . A scaffold4238 ScafM SNP 0010.scaffold00043 14378 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 14478 4 .... GGGG scaffold4238 Both SNP 0010.scaffold00043 14558 1 T C scaffold4238 Both SNP 0010.scaffold00043 14582 1 C A scaffold4238 Both SNP 0010.scaffold00043 14641 1 A G scaffold4238 Both SNP 0010.scaffold00043 14725 1 G C scaffold4238 ReadM SNP 0010.scaffold00043 14824 1 T A - ReadM SNP 0010.scaffold00043 14899 1 G A - ReadM INDEL 0010.scaffold00043 14960 2 .. TA - ScafM SNP 0010.scaffold00043 15188 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 15289 1 C T scaffold4238 Both SNP 0010.scaffold00043 15333 1 A G scaffold4238 ReadM SNP 0010.scaffold00043 15402 1 A G - ScafM SNP 0010.scaffold00043 16030 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 16085 1 A T scaffold4238 ScafM INDEL 0010.scaffold00043 16189 3 ... AAG scaffold4238 Both SNP 0010.scaffold00043 16385 1 C G scaffold4238 Both SNP 0010.scaffold00043 16398 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 16536 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 16542 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 16664 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 16696 1 G A scaffold4238 Both SNP 0010.scaffold00043 16743 1 C A scaffold4238 Both SNP 0010.scaffold00043 16746 1 T G scaffold4238 Both SNP 0010.scaffold00043 16772 1 C A scaffold4238 Both SNP 0010.scaffold00043 16823 1 G C scaffold4238 Both SNP 0010.scaffold00043 16893 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 16978 5 ..... TTAAA scaffold4238 Both SNP 0010.scaffold00043 17103 1 T C scaffold4238 Both SNP 0010.scaffold00043 17390 1 T C scaffold4238 ReadM SNP 0010.scaffold00043 17746 1 T C - ReadM SNP 0010.scaffold00043 17838 1 T G - Both SNP 0010.scaffold00043 18025 1 A C scaffold4238 Both SNP 0010.scaffold00043 18048 1 C G scaffold4238 Both SNP 0010.scaffold00043 18117 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 18196 3 TCT ... scaffold4238 ScafM INDEL 0010.scaffold00043 18200 2 GA .T scaffold4238 Both SNP 0010.scaffold00043 18437 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 18447 2 .. TA scaffold4238 ScafM SNP 0010.scaffold00043 18451 1 G T scaffold4238 Both SNP 0010.scaffold00043 18600 1 C G scaffold4238 Both SNP 0010.scaffold00043 19347 1 G A scaffold4238 Both SNP 0010.scaffold00043 19942 1 T C scaffold4238 Both SNP 0010.scaffold00043 19948 1 A G scaffold4238 Both SNP 0010.scaffold00043 20064 1 C T scaffold4238 Both SNP 0010.scaffold00043 20121 1 T C scaffold4238 Both SNP 0010.scaffold00043 20224 1 T G scaffold4238 Both SNP 0010.scaffold00043 20269 1 A T scaffold4238 ReadM SNP 0010.scaffold00043 20345 1 C T - ScafM SNP 0010.scaffold00043 20735 1 G A scaffold4238 ScafM INDEL 0010.scaffold00043 20744 4 .... GTTT scaffold4238 ReadM SNP 0010.scaffold00043 21130 1 G A - ScafM INDEL 0010.scaffold00043 21247 7 ....... ACAGTTT scaffold4238 ScafM SNP 0010.scaffold00043 21285 1 C T scaffold4238 Both SNP 0010.scaffold00043 21578 1 C T scaffold4238 Both SNP 0010.scaffold00043 21998 1 G C scaffold4238 ReadM SNP 0010.scaffold00043 22635 1 G A - ScafM INDEL 0010.scaffold00043 22737 4 GCGT .... scaffold4238 Both SNP 0010.scaffold00043 22775 1 G A scaffold4238 Both SNP 0010.scaffold00043 23041 1 T C scaffold4238 Both SNP 0010.scaffold00043 23325 1 C A scaffold4238 Both SNP 0010.scaffold00043 23390 1 T G scaffold4238 Both SNP 0010.scaffold00043 23497 1 A G scaffold4238 Both SNP 0010.scaffold00043 23788 1 T C scaffold4238 Both SNP 0010.scaffold00043 23800 1 A C scaffold4238 Both SNP 0010.scaffold00043 23989 1 T C scaffold4238 Both SNP 0010.scaffold00043 24102 1 C T scaffold4238 Both SNP 0010.scaffold00043 24139 1 C T scaffold4238 Both SNP 0010.scaffold00043 24253 1 C A scaffold4238 Both SNP 0010.scaffold00043 24286 1 A G scaffold4238 Both SNP 0010.scaffold00043 24343 1 A G scaffold4238 Both SNP 0010.scaffold00043 24402 1 G A scaffold4238 Both SNP 0010.scaffold00043 24505 1 A G scaffold4238 Both SNP 0010.scaffold00043 24541 1 G A scaffold4238 Both SNP 0010.scaffold00043 24595 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 24759 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 25080 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 25218 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 25230 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 25241 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 25276 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 25293 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 25319 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 25351 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 25353 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 25385 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 25397 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 25410 1 G T scaffold4238 ScafM INDEL 0010.scaffold00043 25427 1 . T scaffold4238 ScafM SNP 0010.scaffold00043 25429 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 25462 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 25505 1 T C scaffold4238 ReadM SNP 0010.scaffold00043 25824 1 A C - Both SNP 0010.scaffold00043 25956 1 A G scaffold4238 Both SNP 0010.scaffold00043 25960 1 G A scaffold4238 Both SNP 0010.scaffold00043 26131 1 G A scaffold4238 Both SNP 0010.scaffold00043 26167 1 A T scaffold4238 Both SNP 0010.scaffold00043 26286 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 26292 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 26303 1 T C scaffold4238 Both SNP 0010.scaffold00043 26327 1 T C scaffold4238 Both SNP 0010.scaffold00043 26360 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 26438 2 GT TG scaffold4238 ScafM SNP 0010.scaffold00043 26442 1 A G scaffold4238 Both SNP 0010.scaffold00043 26469 1 A C scaffold4238 Both SNP 0010.scaffold00043 26515 1 T C scaffold4238 Both SNP 0010.scaffold00043 26519 1 C A scaffold4238 Both SNP 0010.scaffold00043 26569 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 26597 2 TC CT scaffold4238 Both SNP 0010.scaffold00043 26650 1 C G scaffold4238 ScafM SNP 0010.scaffold00043 26732 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 26734 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 26738 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 26742 1 T G scaffold4238 ScafM SNP 0010.scaffold00043 26758 2 GA AG scaffold4238 ScafM SNP 0010.scaffold00043 26762 1 G T scaffold4238 ScafM SNP 0010.scaffold00043 26770 1 T C scaffold4238 Both SNP 0010.scaffold00043 26782 1 A G scaffold4238 Both SNP 0010.scaffold00043 26815 1 G A scaffold4238 Both SNP 0010.scaffold00043 26885 1 G A scaffold4238 Both SNP 0010.scaffold00043 26926 1 A G scaffold4238 Both SNP 0010.scaffold00043 26987 1 A T scaffold4238 Both SNP 0010.scaffold00043 27157 1 C G scaffold4238 Both SNP 0010.scaffold00043 27191 1 A C scaffold4238 Both SNP 0010.scaffold00043 27202 1 A G scaffold4238 Both SNP 0010.scaffold00043 27371 1 G C scaffold4238 Both SNP 0010.scaffold00043 27421 1 G T scaffold4238 Both SNP 0010.scaffold00043 27498 1 G A scaffold4238 Both SNP 0010.scaffold00043 27654 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 27774 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 27926 1 A T scaffold4238 Both SNP 0010.scaffold00043 28092 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 28181 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 28188 1 T C scaffold4238 ScafM SNP 0010.scaffold00043 28195 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 28235 1 C T scaffold4238 Both SNP 0010.scaffold00043 28270 1 A G scaffold4238 Both SNP 0010.scaffold00043 28392 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 28520 1 . T scaffold4238 ScafM SNP 0010.scaffold00043 28572 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 28589 1 T . scaffold4238 Both SNP 0010.scaffold00043 28883 1 G C scaffold4238 Both SNP 0010.scaffold00043 29138 1 T C scaffold4238 Both SNP 0010.scaffold00043 29196 1 T G scaffold4238 Both SNP 0010.scaffold00043 29268 1 C T scaffold4238 Both SNP 0010.scaffold00043 29467 1 C A scaffold4238 Both SNP 0010.scaffold00043 29581 1 T C scaffold4238 Both SNP 0010.scaffold00043 29626 1 G C scaffold4238 Both SNP 0010.scaffold00043 29634 1 G T scaffold4238 ScafM SNP 0010.scaffold00043 29687 1 T A scaffold4238 ScafM INDEL 0010.scaffold00043 29691 8 ........ ATGTTGCC scaffold4238 Both SNP 0010.scaffold00043 29746 1 G A scaffold4238 Both SNP 0010.scaffold00043 29968 1 G T scaffold4238 Both SNP 0010.scaffold00043 30026 1 G C scaffold4238 ScafM SNP 0010.scaffold00043 30047 1 C T scaffold4238 ScafM INDEL 0010.scaffold00043 30055 1 C . scaffold4238 ScafM SNP 0010.scaffold00043 30062 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 30114 1 A G scaffold4238 ScafM INDEL 0010.scaffold00043 30146 7 ....... AGTTATC scaffold4238 Both SNP 0010.scaffold00043 30170 1 A G scaffold4238 Both SNP 0010.scaffold00043 30217 1 C T scaffold4238 Both SNP 0010.scaffold00043 30224 1 T G scaffold4238 Both INDEL 0010.scaffold00043 30327 1 . A scaffold4238 ScafM SNP 0010.scaffold00043 30332 1 T A scaffold4238 Both SNP 0010.scaffold00043 30524 1 T C scaffold4238 Both SNP 0010.scaffold00043 30565 1 T C scaffold4238 Both SNP 0010.scaffold00043 30672 1 G C scaffold4238 Both SNP 0010.scaffold00043 30958 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 30979 1 C T scaffold4238 ScafM SNP 0010.scaffold00043 31005 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 31013 1 T G scaffold4238 ScafM INDEL 0010.scaffold00043 31064 8 TCAATTAG ........ scaffold4238 ScafM SNP 0010.scaffold00043 31103 1 C A scaffold4238 ScafM SNP 0010.scaffold00043 31113 1 C A scaffold4238 Both INDEL 0010.scaffold00043 31132 1 A . scaffold4238 Both SNP 0010.scaffold00043 31281 1 G A scaffold4238 ScafM SNP 0010.scaffold00043 31337 1 A T scaffold4238 ScafM SNP 0010.scaffold00043 31345 1 T A scaffold4238 Both SNP 0010.scaffold00043 31459 1 T A scaffold4238 Both SNP 0010.scaffold00043 31630 1 T C scaffold4238 ReadM SNP 0010.scaffold00043 31658 1 A T - ReadM SNP 0010.scaffold00043 31667 1 C T - Both INDEL 0010.scaffold00043 32216 1 . T scaffold4238 ReadM SNP 0010.scaffold00043 32340 1 C A - ReadM SNP 0010.scaffold00043 33769 1 T C - ReadM SNP 0010.scaffold00043 33808 1 C T - ScafM SNP 0010.scaffold00043 34123 1 C T scaffold4238 Both INDEL 0010.scaffold00043 34153 1 . T scaffold4238 Both SNP 0010.scaffold00043 34211 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 34280 69 ..................................................................... AGTTTTTTTTTTTTGGTCTCATTTTACCAAATTTTGTCCATCTAATTTTTAAACAAAATACATCTAAAT scaffold4238 ScafM INDEL 0010.scaffold00043 34282 9 ......... CAATAAGTT scaffold4238 Both SNP 0010.scaffold00043 34405 1 A G scaffold4238 Both SNP 0010.scaffold00043 34407 1 C T scaffold4238 Both INDEL 0010.scaffold00043 34484 2 .. TC scaffold4238 ScafM SNP 0010.scaffold00043 34562 1 A G scaffold4238 ScafM SNP 0010.scaffold00043 34565 1 T A scaffold4238 ScafM SNP 0010.scaffold00043 34619 3 AGC CAT scaffold4238 ScafM SNP 0010.scaffold00043 34644 2 TC AT scaffold4238 Both SNP 0010.scaffold00043 34681 1 A C scaffold4238 ScafM SNP 0010.scaffold00043 34797 2 GT AC scaffold4238 ScafM SNP 0010.scaffold00043 34911 1 C T scaffold4238 ReadM SNP 0010.scaffold00043 35023 1 G C - ReadM SNP 0010.scaffold00043 35196 1 T C - ReadM SNP 0010.scaffold00043 35198 1 G A - ReadM INDEL 0010.scaffold00043 35212 1 A . - ReadM SNP 0010.scaffold00043 35359 1 G A - ReadM SNP 0010.scaffold00043 35367 1 T C - ReadM SNP 0010.scaffold00043 35695 1 T C - ReadM SNP 0010.scaffold00043 35806 1 G A - ReadM SNP 0010.scaffold00043 35822 1 T G - ReadM SNP 0010.scaffold00043 35840 1 A G - ReadM SNP 0010.scaffold00043 35870 1 T A - ReadM SNP 0010.scaffold00043 35903 1 G T - ReadM INDEL 0010.scaffold00043 36577 1 T . - ReadM SNP 0010.scaffold00043 36613 1 G A - ReadM SNP 0010.scaffold00043 36663 1 A G - ReadM SNP 0010.scaffold00043 36685 1 A G - ReadM SNP 0010.scaffold00043 36847 1 G T - ReadM SNP 0010.scaffold00043 36875 1 A T - ReadM SNP 0010.scaffold00043 37007 1 A G - ReadM SNP 0010.scaffold00043 37064 1 A T - ReadM SNP 0010.scaffold00043 37170 1 C T - ReadM SNP 0010.scaffold00043 37292 1 T C - ReadM SNP 0010.scaffold00043 37577 1 G A - ReadM SNP 0010.scaffold00043 37585 1 G C - Both SNP 0010.scaffold00043 37668 1 T C scaffold4238 Both SNP 0010.scaffold00043 37687 1 G T scaffold4238 ReadM SNP 0010.scaffold00043 37745 1 A C - ReadM SNP 0010.scaffold00043 37841 1 C T - ReadM SNP 0010.scaffold00043 37929 1 G A - ReadM SNP 0010.scaffold00043 38003 1 G A - ReadM SNP 0010.scaffold00043 38059 1 G C - ReadM SNP 0010.scaffold00043 38234 1 G A - ReadM SNP 0010.scaffold00043 38236 1 G A - ReadM SNP 0010.scaffold00043 38276 1 A G - ReadM SNP 0010.scaffold00043 38282 1 A G - ReadM SNP 0010.scaffold00043 38340 1 G A - ReadM SNP 0010.scaffold00043 38733 1 T C - ReadM SNP 0010.scaffold00043 38767 1 C T - ReadM SNP 0010.scaffold00043 38838 1 C A - ScafM SNP 0010.scaffold00043 38923 1 T C scaffold4238 ScafM INDEL 0010.scaffold00043 41244 1 A . scaffold2454 ScafM SNP 0010.scaffold00043 41246 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 41760 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 41782 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 41820 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 41859 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 41983 2 .. TC scaffold2454 ScafM SNP 0010.scaffold00043 42010 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 42027 1 T A scaffold2454 Both SNP 0010.scaffold00043 42183 1 T A scaffold2454 Both SNP 0010.scaffold00043 42680 1 G A scaffold2454 ReadM SNP 0010.scaffold00043 43024 1 G A - Both SNP 0010.scaffold00043 43099 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 43113 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 43116 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 43143 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 43163 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 43202 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 43210 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 43228 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 43264 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 43277 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 43296 1 C A scaffold2454 Both SNP 0010.scaffold00043 43431 1 T C scaffold2454 Both SNP 0010.scaffold00043 43477 1 G A scaffold2454 Both SNP 0010.scaffold00043 43497 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 43510 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 43528 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 43532 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 43543 1 C T scaffold2454 Both SNP 0010.scaffold00043 43800 1 C A scaffold2454 Both SNP 0010.scaffold00043 44492 1 C T scaffold2454 Both SNP 0010.scaffold00043 44633 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 44934 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 45185 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 45202 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 45207 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 45209 2 AA GG scaffold2454 ScafM SNP 0010.scaffold00043 45217 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 45234 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 45244 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 45246 2 CT TA scaffold2454 ScafM SNP 0010.scaffold00043 45270 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 45276 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 45282 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 45295 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 45303 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 45336 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 45338 8 ........ TGATTGAT scaffold2454 ScafM SNP 0010.scaffold00043 45364 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 45401 1 G T scaffold2454 ScafM INDEL 0010.scaffold00043 45417 4 GTAT .... scaffold2454 ScafM SNP 0010.scaffold00043 45433 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 45438 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 45447 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 45450 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 45459 2 CT AC scaffold2454 ScafM SNP 0010.scaffold00043 45483 1 C A scaffold2454 ScafM INDEL 0010.scaffold00043 45512 1 . T scaffold2454 ScafM INDEL 0010.scaffold00043 45516 1 A . scaffold2454 ScafM SNP 0010.scaffold00043 45519 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 45522 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 45530 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 45550 3 ... CGT scaffold2454 ScafM SNP 0010.scaffold00043 45553 2 GT AA scaffold2454 ScafM SNP 0010.scaffold00043 45559 1 C G scaffold2454 ScafM INDEL 0010.scaffold00043 45573 1 A . scaffold2454 ScafM SNP 0010.scaffold00043 45581 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 45611 10 .......... CCAAAAAGCA scaffold2454 ScafM INDEL 0010.scaffold00043 45615 7 ....... CTCTTAA scaffold2454 ScafM SNP 0010.scaffold00043 45646 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 45657 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 45667 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 45668 6 ...... TTGTTG scaffold2454 ScafM SNP 0010.scaffold00043 45682 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 45701 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 45887 1 A C scaffold2454 ScafM INDEL 0010.scaffold00043 45899 2 AT .. scaffold2454 ScafM INDEL 0010.scaffold00043 45904 1 G . scaffold2454 ScafM INDEL 0010.scaffold00043 45906 1 G . scaffold2454 ScafM SNP 0010.scaffold00043 45919 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 45971 1 . A scaffold2454 ScafM SNP 0010.scaffold00043 45973 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 45977 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 45984 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 46017 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 46024 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 46026 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 46028 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 46051 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 46058 1 C T scaffold2454 Both SNP 0010.scaffold00043 46068 1 G C scaffold2454 Both SNP 0010.scaffold00043 46180 1 T C scaffold2454 Both SNP 0010.scaffold00043 46217 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 46243 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 46247 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 46251 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 46284 2 CG AA scaffold2454 ScafM INDEL 0010.scaffold00043 46368 28 TTGAAGTCTTGAACAGATAGTTGGAAGC ............................ scaffold2454 ScafM SNP 0010.scaffold00043 46406 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 46433 1 G C scaffold2454 ScafM INDEL 0010.scaffold00043 46688 5 ..... ACTCT scaffold2454 Both SNP 0010.scaffold00043 47177 1 T C scaffold2454 Both SNP 0010.scaffold00043 47218 1 G A scaffold2454 Both SNP 0010.scaffold00043 47369 1 T C scaffold2454 Both SNP 0010.scaffold00043 47420 1 G A scaffold2454 Both SNP 0010.scaffold00043 47480 1 A G scaffold2454 Both SNP 0010.scaffold00043 47790 1 G A scaffold2454 Both SNP 0010.scaffold00043 48024 1 T A scaffold2454 Both SNP 0010.scaffold00043 48038 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 48125 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 48132 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 48148 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 48158 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 48255 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 48258 1 T A scaffold2454 ScafM INDEL 0010.scaffold00043 48333 11 TTAGTGATTGT ........... scaffold2454 ScafM SNP 0010.scaffold00043 48362 1 T G scaffold2454 ScafM INDEL 0010.scaffold00043 48367 2 GA .. scaffold2454 ScafM INDEL 0010.scaffold00043 48370 3 TTG ... scaffold2454 ScafM INDEL 0010.scaffold00043 48377 1 T . scaffold2454 ScafM INDEL 0010.scaffold00043 48384 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 48397 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 48404 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 48418 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 48441 4 TGTG .... scaffold2454 ScafM INDEL 0010.scaffold00043 48447 3 TAG ... scaffold2454 ScafM INDEL 0010.scaffold00043 48470 3 ... TCT scaffold2454 ScafM INDEL 0010.scaffold00043 48471 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 48485 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 48504 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 51363 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 51380 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 51414 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51439 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51441 1 G C scaffold2454 ScafM INDEL 0010.scaffold00043 51446 1 . C scaffold2454 ScafM SNP 0010.scaffold00043 51450 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51462 2 CC AA scaffold2454 ScafM SNP 0010.scaffold00043 51465 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 51468 4 .... CAGT scaffold2454 ScafM INDEL 0010.scaffold00043 51472 2 .. CC scaffold2454 ScafM SNP 0010.scaffold00043 51473 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 51475 1 . G scaffold2454 ScafM SNP 0010.scaffold00043 51481 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 51484 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 51487 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51490 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 51512 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 51530 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 51532 5 AAAAA TTTTT scaffold2454 ScafM SNP 0010.scaffold00043 51540 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 51543 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 51548 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 51552 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 51586 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51641 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 51649 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 51667 2 GA AT scaffold2454 ScafM INDEL 0010.scaffold00043 51679 1 . A scaffold2454 ScafM SNP 0010.scaffold00043 51683 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 51700 1 G T scaffold2454 ScafM INDEL 0010.scaffold00043 51720 19 ................... TATTAACTTTTGATAGTTT scaffold2454 ScafM SNP 0010.scaffold00043 51740 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 51756 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 51785 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 51811 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 51823 23 GCTTCAAAGGATTAGTTGAACCT ....................... scaffold2454 ScafM INDEL 0010.scaffold00043 51853 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 51873 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 51900 1 . A scaffold2454 ScafM SNP 0010.scaffold00043 51912 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 51945 2 AG GT scaffold2454 ScafM SNP 0010.scaffold00043 51972 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 51984 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 52030 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 52059 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 52096 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 52115 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 52128 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52134 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52140 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52149 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 52182 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 52197 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52199 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52218 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 52233 6 ...... GCAAAG scaffold2454 ScafM INDEL 0010.scaffold00043 52235 4 .... TATT scaffold2454 ScafM SNP 0010.scaffold00043 52238 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 52295 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52298 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 52340 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 52359 2 .. AA scaffold2454 ScafM SNP 0010.scaffold00043 52361 1 G T scaffold2454 ScafM INDEL 0010.scaffold00043 52374 1 . G scaffold2454 ScafM INDEL 0010.scaffold00043 52378 2 .. CA scaffold2454 ScafM SNP 0010.scaffold00043 52392 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52419 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 52425 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52439 2 TG CT scaffold2454 ScafM SNP 0010.scaffold00043 52450 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52481 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52495 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 52503 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 52525 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 52540 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 52561 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52575 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 52578 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 52607 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 52622 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 52634 8 AAAAACGC ........ scaffold2454 ScafM INDEL 0010.scaffold00043 52644 4 TTTC .... scaffold2454 ScafM SNP 0010.scaffold00043 52650 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 52653 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 52656 1 T G scaffold2454 ScafM INDEL 0010.scaffold00043 52660 1 C . scaffold2454 ScafM INDEL 0010.scaffold00043 52662 4 AAAG .... scaffold2454 ScafM SNP 0010.scaffold00043 52678 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52711 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 52737 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 52742 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52753 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 52756 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 52775 1 T A scaffold2454 ScafM INDEL 0010.scaffold00043 52820 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 52822 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52843 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 52857 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 52870 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 52874 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52895 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 52917 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 52919 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 52975 3 ... GTG scaffold2454 ScafM SNP 0010.scaffold00043 53003 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 53018 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 53028 1 T A scaffold2454 ScafM INDEL 0010.scaffold00043 53034 2 TA .. scaffold2454 ScafM SNP 0010.scaffold00043 53060 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 53099 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 53134 1 C A scaffold2454 ReadM SNP 0010.scaffold00043 53498 1 A T - ScafM INDEL 0010.scaffold00043 53968 3 ... GTT scaffold2454 ScafM INDEL 0010.scaffold00043 53969 2 .. CG scaffold2454 ScafM SNP 0010.scaffold00043 53992 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 53996 2 AA GG scaffold2454 ScafM INDEL 0010.scaffold00043 53998 2 .. TG scaffold2454 ScafM INDEL 0010.scaffold00043 54000 2 .. GG scaffold2454 ScafM SNP 0010.scaffold00043 54004 1 A C scaffold2454 ScafM INDEL 0010.scaffold00043 54005 2 .. CG scaffold2454 ScafM INDEL 0010.scaffold00043 54011 1 . T scaffold2454 ScafM INDEL 0010.scaffold00043 54045 1 C . scaffold2454 ScafM INDEL 0010.scaffold00043 54047 1 A . scaffold2454 ScafM SNP 0010.scaffold00043 54049 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 54060 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 54080 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 54232 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 54267 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 54270 1 G T scaffold2454 Both SNP 0010.scaffold00043 54481 1 G A scaffold2454 Both SNP 0010.scaffold00043 54674 1 A C scaffold2454 Both SNP 0010.scaffold00043 54787 1 G A scaffold2454 Both SNP 0010.scaffold00043 54824 1 G A scaffold2454 Both INDEL 0010.scaffold00043 55014 1 . A scaffold2454 Both SNP 0010.scaffold00043 55745 1 G A scaffold2454 Both SNP 0010.scaffold00043 56071 1 T C scaffold2454 Both SNP 0010.scaffold00043 56228 1 C T scaffold2454 Both INDEL 0010.scaffold00043 56479 2 .. AA scaffold2454 Both SNP 0010.scaffold00043 56537 1 A G scaffold2454 Both SNP 0010.scaffold00043 56619 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 56976 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 56987 7 ....... CCATTGT scaffold2454 ScafM SNP 0010.scaffold00043 57230 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 57278 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 57289 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 57601 1 C T scaffold2454 Both SNP 0010.scaffold00043 57908 1 G T scaffold2454 Both SNP 0010.scaffold00043 59301 1 C A scaffold2454 ReadM SNP 0010.scaffold00043 59710 1 A T - ReadM SNP 0010.scaffold00043 59977 1 A T - ReadM SNP 0010.scaffold00043 60006 1 A G - Both SNP 0010.scaffold00043 60083 1 C A scaffold2454 ReadM SNP 0010.scaffold00043 60321 1 T C - ReadM INDEL 0010.scaffold00043 60449 1 T . - ReadM SNP 0010.scaffold00043 60510 1 A G - ReadM SNP 0010.scaffold00043 60608 1 G T - ReadM SNP 0010.scaffold00043 60897 1 A C - ReadM SNP 0010.scaffold00043 60992 1 C T - Both SNP 0010.scaffold00043 61038 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 61297 8 ACTACACC ........ scaffold2454 ScafM SNP 0010.scaffold00043 61312 1 A C scaffold2454 Both SNP 0010.scaffold00043 61410 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 62096 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 62195 1 C T scaffold2454 Both INDEL 0010.scaffold00043 62881 1 A . scaffold2454 Both SNP 0010.scaffold00043 62919 1 T G scaffold2454 Both SNP 0010.scaffold00043 62923 1 A G scaffold2454 ReadM SNP 0010.scaffold00043 63109 1 A C - ReadM SNP 0010.scaffold00043 63116 1 T C - ReadM SNP 0010.scaffold00043 63274 1 C T - Both SNP 0010.scaffold00043 64223 1 T C scaffold2454 Both SNP 0010.scaffold00043 64359 1 T G scaffold2454 ScafM INDEL 0010.scaffold00043 64647 2 AA .. scaffold2454 ScafM INDEL 0010.scaffold00043 64916 2 TT .. scaffold2454 ScafM SNP 0010.scaffold00043 64970 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 64976 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 65327 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 65373 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 65377 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 65395 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 65446 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 65556 1 . A scaffold2454 ScafM SNP 0010.scaffold00043 65559 1 C A scaffold2454 ScafM INDEL 0010.scaffold00043 65607 1 C . scaffold2454 ScafM SNP 0010.scaffold00043 65700 2 AT TG scaffold2454 Both SNP 0010.scaffold00043 65726 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 65828 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 66058 1 T . scaffold2454 ScafM INDEL 0010.scaffold00043 66133 2 TT .. scaffold2454 ScafM SNP 0010.scaffold00043 66401 1 C A scaffold2454 ScafM INDEL 0010.scaffold00043 66447 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 66453 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 66821 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 66840 1 T C scaffold2454 Both SNP 0010.scaffold00043 67946 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 68398 21 ..................... TTTGATTGTATAAGATGAGAT scaffold2454 Both SNP 0010.scaffold00043 68422 1 T C scaffold2454 Both SNP 0010.scaffold00043 68428 1 A T scaffold2454 Both SNP 0010.scaffold00043 68519 1 C T scaffold2454 Both SNP 0010.scaffold00043 68557 1 A T scaffold2454 Both INDEL 0010.scaffold00043 68617 1 . A scaffold2454 Both SNP 0010.scaffold00043 68644 1 G T scaffold2454 Both SNP 0010.scaffold00043 68664 1 C A scaffold2454 Both SNP 0010.scaffold00043 68688 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 68763 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 68765 1 A G scaffold2454 Both SNP 0010.scaffold00043 68804 1 A G scaffold2454 Both SNP 0010.scaffold00043 68970 1 G A scaffold2454 Both SNP 0010.scaffold00043 69089 1 T G scaffold2454 Both SNP 0010.scaffold00043 69282 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 69360 2 TC AT scaffold2454 Both INDEL 0010.scaffold00043 69366 1 . C scaffold2454 Both SNP 0010.scaffold00043 69387 1 T C scaffold2454 Both INDEL 0010.scaffold00043 70275 1 T . scaffold2454 Both SNP 0010.scaffold00043 70378 1 C A scaffold2454 ScafM INDEL 0010.scaffold00043 70593 8 ........ GGGTTTGA scaffold2454 ReadM SNP 0010.scaffold00043 70687 1 A G - ReadM SNP 0010.scaffold00043 70950 1 T C - Both SNP 0010.scaffold00043 71186 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 71587 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 71589 1 T A scaffold2454 ScafM INDEL 0010.scaffold00043 71611 8 ........ GACTTGCA scaffold2454 ScafM SNP 0010.scaffold00043 71928 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 72019 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 72026 4 .... TAGC scaffold2454 ScafM SNP 0010.scaffold00043 72032 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 72034 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 72059 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 72068 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 72120 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 72129 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 72156 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 72158 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 72424 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 72450 7 ....... AGTAAGA scaffold2454 ScafM SNP 0010.scaffold00043 72455 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 72466 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 72499 1 A C scaffold2454 ScafM INDEL 0010.scaffold00043 72515 4 AAAT .... scaffold2454 ScafM SNP 0010.scaffold00043 72691 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 72745 1 A C scaffold2454 Both SNP 0010.scaffold00043 72785 1 T A scaffold2454 ScafM INDEL 0010.scaffold00043 72895 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 72916 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 72939 3 ... AAA scaffold2454 ScafM SNP 0010.scaffold00043 72946 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 72948 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 72953 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 72964 1 T . scaffold2454 ScafM INDEL 0010.scaffold00043 72969 1 T . scaffold2454 ScafM INDEL 0010.scaffold00043 72980 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 73319 2 AA .G scaffold2454 ScafM SNP 0010.scaffold00043 73323 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 73366 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 73392 8 ........ ACGGTGAG scaffold2454 ScafM SNP 0010.scaffold00043 73399 1 C A scaffold2454 ScafM INDEL 0010.scaffold00043 73419 1 . G scaffold2454 ScafM INDEL 0010.scaffold00043 73480 8 GTCATATT ........ scaffold2454 ScafM SNP 0010.scaffold00043 73497 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 73503 3 CAC ATT scaffold2454 ScafM INDEL 0010.scaffold00043 73521 4 .... AAAT scaffold2454 ScafM INDEL 0010.scaffold00043 73522 1 . G scaffold2454 ScafM INDEL 0010.scaffold00043 73548 14 .............. CTTTTTTTCTTTTG scaffold2454 ScafM SNP 0010.scaffold00043 73553 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73556 2 AC GT scaffold2454 ScafM INDEL 0010.scaffold00043 73560 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 73563 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 73570 1 . C scaffold2454 ScafM INDEL 0010.scaffold00043 73584 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 73586 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 73590 2 TC .. scaffold2454 ScafM SNP 0010.scaffold00043 73593 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 73597 3 TCC ... scaffold2454 ScafM SNP 0010.scaffold00043 73602 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 73606 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 73609 1 T . scaffold2454 ScafM SNP 0010.scaffold00043 73611 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73613 2 AG TA scaffold2454 ScafM SNP 0010.scaffold00043 73619 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73637 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 73647 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 73669 2 CA .T scaffold2454 ScafM SNP 0010.scaffold00043 73686 1 G T scaffold2454 ScafM INDEL 0010.scaffold00043 73691 4 .... ATAT scaffold2454 ScafM SNP 0010.scaffold00043 73710 1 G A scaffold2454 ScafM INDEL 0010.scaffold00043 73716 1 G . scaffold2454 ScafM SNP 0010.scaffold00043 73721 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 73723 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73736 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 73740 2 .. AA scaffold2454 ScafM INDEL 0010.scaffold00043 73743 4 .... AACA scaffold2454 ScafM INDEL 0010.scaffold00043 73746 1 . T scaffold2454 ScafM INDEL 0010.scaffold00043 73748 1 . C scaffold2454 ScafM SNP 0010.scaffold00043 73759 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 73764 1 A G scaffold2454 ScafM INDEL 0010.scaffold00043 73768 5 AAATT ..... scaffold2454 ScafM SNP 0010.scaffold00043 73775 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 73780 1 G C scaffold2454 ScafM SNP 0010.scaffold00043 73794 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73801 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 73832 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 73862 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73915 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 73920 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 73923 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 73951 3 TAT ... scaffold2454 ScafM SNP 0010.scaffold00043 73960 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 73978 3 ... ATG scaffold2454 ScafM SNP 0010.scaffold00043 74019 1 T A scaffold2454 ScafM SNP 0010.scaffold00043 74031 1 T C scaffold2454 ScafM INDEL 0010.scaffold00043 74037 2 .. AC scaffold2454 ScafM SNP 0010.scaffold00043 74039 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 74043 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 74057 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 74068 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 74081 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 74089 1 T G scaffold2454 ScafM INDEL 0010.scaffold00043 74109 4 .... TCAA scaffold2454 ScafM SNP 0010.scaffold00043 74114 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 74125 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 74169 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 74239 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 74247 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 74358 1 C G scaffold2454 ScafM SNP 0010.scaffold00043 74410 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 74423 1 A T scaffold2454 ScafM INDEL 0010.scaffold00043 74452 1 . T scaffold2454 ScafM SNP 0010.scaffold00043 74458 1 C T scaffold2454 ScafM SNP 0010.scaffold00043 74501 1 G T scaffold2454 ScafM SNP 0010.scaffold00043 74519 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 74763 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 74780 1 A G scaffold2454 ReadM SNP 0010.scaffold00043 74897 1 A C - ReadM INDEL 0010.scaffold00043 74933 1 A . - Both INDEL 0010.scaffold00043 75031 1 A . scaffold2454 ScafM INDEL 0010.scaffold00043 75219 5 GCCGG ..... scaffold2454 ScafM SNP 0010.scaffold00043 75289 1 A G scaffold2454 Both SNP 0010.scaffold00043 75293 1 A C scaffold2454 ScafM SNP 0010.scaffold00043 75395 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 75407 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 75419 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 76395 27 ........................... TGCTGATTTTCTTAATTAAAGCTTTTT scaffold2454 ScafM SNP 0010.scaffold00043 76416 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 76436 1 A T scaffold2454 ScafM SNP 0010.scaffold00043 76440 1 A G scaffold2454 ScafM SNP 0010.scaffold00043 76475 1 G A scaffold2454 ScafM SNP 0010.scaffold00043 76603 1 C T scaffold2454 ScafM INDEL 0010.scaffold00043 76632 8 ........ ACTATATT scaffold2454 ScafM INDEL 0010.scaffold00043 76751 19 ................... CCCACTACTAAAATGGAAG scaffold2454 ScafM SNP 0010.scaffold00043 76788 1 C A scaffold2454 ScafM SNP 0010.scaffold00043 76858 1 T C scaffold2454 ScafM SNP 0010.scaffold00043 77447 2 AA TT scaffold2454 Both INDEL 0010.scaffold00043 77570 1 . A scaffold2454 Both SNP 0010.scaffold00043 77636 1 T A scaffold2454 Both SNP 0010.scaffold00043 77731 1 A G scaffold2454 ReadM SNP 0010.scaffold00043 77783 1 A C - ScafM SNP 0010.scaffold00043 78111 1 T G scaffold2454 ScafM SNP 0010.scaffold00043 80735 1 G A scaffold42866 Both SNP 0010.scaffold00043 82399 1 A G scaffold15459 Both SNP 0010.scaffold00043 85722 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 86073 1 C A scaffold15459 ReadM SNP 0010.scaffold00043 86784 1 A G - ScafM SNP 0010.scaffold00043 91150 1 T G scaffold15459 Both SNP 0010.scaffold00043 91339 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 91593 1 T A scaffold15459 ScafM INDEL 0010.scaffold00043 91630 1 A . scaffold15459 ScafM SNP 0010.scaffold00043 91679 2 AG CA scaffold15459 ScafM INDEL 0010.scaffold00043 91685 2 .. TA scaffold15459 ScafM SNP 0010.scaffold00043 91695 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 91701 1 T A scaffold15459 ReadM SNP 0010.scaffold00043 91828 1 G A - ScafM INDEL 0010.scaffold00043 92053 4 AAAA .... scaffold15459 Both SNP 0010.scaffold00043 92243 1 T C scaffold15459 Both SNP 0010.scaffold00043 92273 1 C T scaffold15459 Both SNP 0010.scaffold00043 92290 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 92397 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 93002 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 93007 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 93011 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 93032 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 93175 4 .... AGAT scaffold15459 ScafM SNP 0010.scaffold00043 93177 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 93201 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 93208 4 TAAT .... scaffold15459 ScafM SNP 0010.scaffold00043 93222 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 93399 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 93409 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 93556 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 93558 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 93567 8 ........ CAATGAGA scaffold15459 ScafM INDEL 0010.scaffold00043 93586 1 T . scaffold15459 ScafM SNP 0010.scaffold00043 93591 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 93622 2 AC .G scaffold15459 ScafM SNP 0010.scaffold00043 93626 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 93635 1 G A scaffold15459 ScafM INDEL 0010.scaffold00043 93760 11 CATTTTTTTTG ........... scaffold15459 ScafM INDEL 0010.scaffold00043 93808 8 GCCTATCT ........ scaffold15459 ScafM SNP 0010.scaffold00043 93847 1 C A scaffold15459 ScafM SNP 0010.scaffold00043 93864 2 AG GA scaffold15459 ScafM INDEL 0010.scaffold00043 93928 2 AG .. scaffold15459 ScafM INDEL 0010.scaffold00043 93931 1 A . scaffold15459 Both SNP 0010.scaffold00043 93974 1 A T scaffold15459 Both SNP 0010.scaffold00043 94241 1 A G scaffold15459 Both SNP 0010.scaffold00043 94261 1 T A scaffold15459 ReadM SNP 0010.scaffold00043 94384 1 C T - ScafM SNP 0010.scaffold00043 94523 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 94536 1 G . scaffold15459 ScafM SNP 0010.scaffold00043 94542 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 94545 1 G A scaffold15459 Both SNP 0010.scaffold00043 94917 1 A G scaffold15459 Both SNP 0010.scaffold00043 94992 1 C T scaffold15459 Both SNP 0010.scaffold00043 95055 1 G A scaffold15459 Both SNP 0010.scaffold00043 95070 1 G A scaffold15459 ReadM SNP 0010.scaffold00043 95236 1 G A - ReadM SNP 0010.scaffold00043 95253 1 T A - Both SNP 0010.scaffold00043 95344 1 T G scaffold15459 Both SNP 0010.scaffold00043 95497 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 95515 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 95517 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 95524 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 95526 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 95546 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 95554 1 G C scaffold15459 ScafM SNP 0010.scaffold00043 95566 1 G A scaffold15459 ScafM INDEL 0010.scaffold00043 95578 1 . G scaffold15459 ScafM INDEL 0010.scaffold00043 95581 1 T . scaffold15459 Both SNP 0010.scaffold00043 95676 1 C G scaffold15459 Both SNP 0010.scaffold00043 95683 1 C T scaffold15459 Both SNP 0010.scaffold00043 95836 1 G T scaffold15459 Both SNP 0010.scaffold00043 96266 1 A G scaffold15459 Both SNP 0010.scaffold00043 96324 1 C T scaffold15459 Both INDEL 0010.scaffold00043 96358 1 . A scaffold15459 Both SNP 0010.scaffold00043 96366 1 A G scaffold15459 Both SNP 0010.scaffold00043 96421 1 T G scaffold15459 Both SNP 0010.scaffold00043 96740 1 G A scaffold15459 Both SNP 0010.scaffold00043 96784 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 96947 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 96955 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 96978 2 TA .. scaffold15459 ScafM SNP 0010.scaffold00043 97155 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 97162 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 97172 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 97180 1 G T scaffold15459 Both SNP 0010.scaffold00043 97263 1 G A scaffold15459 Both SNP 0010.scaffold00043 97649 1 T C scaffold15459 Both SNP 0010.scaffold00043 98036 1 A G scaffold15459 Both SNP 0010.scaffold00043 98562 1 A G scaffold15459 Both SNP 0010.scaffold00043 98937 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 98946 1 A G scaffold15459 Both SNP 0010.scaffold00043 99300 1 T A scaffold15459 Both SNP 0010.scaffold00043 99484 1 G C scaffold15459 Both SNP 0010.scaffold00043 99666 1 G A scaffold15459 Both SNP 0010.scaffold00043 100025 1 T C scaffold15459 Both SNP 0010.scaffold00043 100549 1 T C scaffold15459 Both SNP 0010.scaffold00043 100579 1 A C scaffold15459 Both SNP 0010.scaffold00043 100623 1 A C scaffold15459 Both SNP 0010.scaffold00043 100740 1 T G scaffold15459 Both INDEL 0010.scaffold00043 100812 1 . T scaffold15459 Both SNP 0010.scaffold00043 100955 1 T C scaffold15459 ReadM SNP 0010.scaffold00043 101640 1 G T - ReadM SNP 0010.scaffold00043 101814 1 G A - ReadM INDEL 0010.scaffold00043 101842 1 . A - Both SNP 0010.scaffold00043 102131 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 102176 1 G A scaffold15459 Both SNP 0010.scaffold00043 102206 1 G T scaffold15459 Both SNP 0010.scaffold00043 102272 1 T C scaffold15459 Both SNP 0010.scaffold00043 102296 1 G A scaffold15459 Both SNP 0010.scaffold00043 102313 1 G A scaffold15459 Both SNP 0010.scaffold00043 102519 1 C A scaffold15459 ScafM SNP 0010.scaffold00043 102651 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 102663 6 ...... CAGTAT scaffold15459 ScafM SNP 0010.scaffold00043 102690 1 G A scaffold15459 Both SNP 0010.scaffold00043 102742 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 102770 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 102773 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 102778 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 102782 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 102932 1 G A scaffold15459 Both SNP 0010.scaffold00043 102947 1 T G scaffold15459 ReadM SNP 0010.scaffold00043 103190 1 A C - Both SNP 0010.scaffold00043 103410 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 103478 28 ............................ TTTGCGAACTCAGCGGTACAGACAGAGG scaffold15459 Both SNP 0010.scaffold00043 103498 1 A G scaffold15459 Both SNP 0010.scaffold00043 103516 1 G A scaffold15459 ReadM SNP 0010.scaffold00043 103664 1 G C - ReadM SNP 0010.scaffold00043 103685 1 C T - Both SNP 0010.scaffold00043 103752 1 A T scaffold15459 Both INDEL 0010.scaffold00043 103768 2 CA .. scaffold15459 Both SNP 0010.scaffold00043 104088 1 C T scaffold15459 Both SNP 0010.scaffold00043 104124 1 G C scaffold15459 Both SNP 0010.scaffold00043 104133 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 104181 1 T A scaffold15459 Both SNP 0010.scaffold00043 104830 1 C A scaffold15459 Both SNP 0010.scaffold00043 105644 1 T A scaffold15459 Both SNP 0010.scaffold00043 107250 1 C T scaffold15459 Both SNP 0010.scaffold00043 107281 1 A G scaffold15459 Both SNP 0010.scaffold00043 107287 1 A C scaffold15459 ScafM INDEL 0010.scaffold00043 107546 8 ........ AGTATTCT scaffold15459 ScafM INDEL 0010.scaffold00043 108090 7 AACTCTC ....... scaffold15459 ScafM SNP 0010.scaffold00043 108136 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 108147 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 108240 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 108367 2 TA CG scaffold15459 ScafM INDEL 0010.scaffold00043 108642 2 TA .. scaffold15459 ScafM INDEL 0010.scaffold00043 108684 1 T . scaffold15459 ScafM SNP 0010.scaffold00043 109044 2 AA TT scaffold15459 Both SNP 0010.scaffold00043 109087 1 C A scaffold15459 ScafM SNP 0010.scaffold00043 109306 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 109319 8 CTGTCAGT ........ scaffold15459 ScafM SNP 0010.scaffold00043 109335 1 C T scaffold15459 Both SNP 0010.scaffold00043 109357 1 T C scaffold15459 Both SNP 0010.scaffold00043 109423 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 109576 5 ..... ATTGA scaffold15459 ScafM SNP 0010.scaffold00043 109579 2 CC AG scaffold15459 ScafM SNP 0010.scaffold00043 109582 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 109584 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 109585 2 .. AC scaffold15459 ScafM INDEL 0010.scaffold00043 109587 3 ... CCC scaffold15459 ScafM INDEL 0010.scaffold00043 109588 1 . G scaffold15459 ScafM INDEL 0010.scaffold00043 109589 4 .... GCCC scaffold15459 ScafM SNP 0010.scaffold00043 109591 1 T C scaffold15459 ScafM INDEL 0010.scaffold00043 109592 3 .TT AAG scaffold15459 ScafM INDEL 0010.scaffold00043 109596 2 .G AA scaffold15459 ScafM INDEL 0010.scaffold00043 109599 2 .. GG scaffold15459 ScafM INDEL 0010.scaffold00043 109602 3 ... AGA scaffold15459 ScafM INDEL 0010.scaffold00043 109603 2 .T AG scaffold15459 ScafM SNP 0010.scaffold00043 109606 4 CGGG TTTA scaffold15459 ScafM INDEL 0010.scaffold00043 109612 1 . C scaffold15459 ScafM SNP 0010.scaffold00043 109615 1 G C scaffold15459 Both INDEL 0010.scaffold00043 109801 1 . C scaffold15459 Both SNP 0010.scaffold00043 109829 1 C G scaffold15459 Both SNP 0010.scaffold00043 109873 1 A C scaffold15459 Both SNP 0010.scaffold00043 109915 1 A G scaffold15459 Both SNP 0010.scaffold00043 110364 1 C A scaffold15459 Both SNP 0010.scaffold00043 110376 1 A G scaffold15459 Both SNP 0010.scaffold00043 110543 1 C T scaffold15459 ReadM SNP 0010.scaffold00043 110949 1 A T - ScafM INDEL 0010.scaffold00043 111557 8 AAAGAGGA ........ scaffold15459 ScafM SNP 0010.scaffold00043 111581 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 111583 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 111585 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 111590 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 111599 7 ....... GGGGGGG scaffold15459 ScafM INDEL 0010.scaffold00043 111780 7 ....... CTGGTAA scaffold15459 Both SNP 0010.scaffold00043 111948 1 C T scaffold15459 Both SNP 0010.scaffold00043 112416 1 C T scaffold15459 Both SNP 0010.scaffold00043 112591 1 C A scaffold15459 Both SNP 0010.scaffold00043 112666 1 C T scaffold15459 ReadM SNP 0010.scaffold00043 112708 1 T C - ReadM SNP 0010.scaffold00043 112890 1 A G - ReadM SNP 0010.scaffold00043 112951 1 C T - Both SNP 0010.scaffold00043 113090 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 113114 8 ACTATATA ........ scaffold15459 Both SNP 0010.scaffold00043 113358 1 C T scaffold15459 Both SNP 0010.scaffold00043 113416 1 T C scaffold15459 Both SNP 0010.scaffold00043 113473 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 113769 1 A G scaffold15459 Both SNP 0010.scaffold00043 113823 1 A T scaffold15459 Both SNP 0010.scaffold00043 114082 1 C T scaffold15459 Both SNP 0010.scaffold00043 114135 1 G T scaffold15459 Both SNP 0010.scaffold00043 114171 1 G A scaffold15459 Both SNP 0010.scaffold00043 114214 1 A C scaffold15459 ScafM SNP 0010.scaffold00043 114266 1 A G scaffold15459 Both SNP 0010.scaffold00043 114379 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 114412 1 A . scaffold15459 Both INDEL 0010.scaffold00043 114426 1 A . scaffold15459 Both SNP 0010.scaffold00043 115378 1 A G scaffold15459 Both SNP 0010.scaffold00043 115401 1 T A scaffold15459 Both SNP 0010.scaffold00043 115427 1 G A scaffold15459 Both SNP 0010.scaffold00043 115587 1 G A scaffold15459 Both INDEL 0010.scaffold00043 115681 2 AC .. scaffold15459 ScafM INDEL 0010.scaffold00043 115724 15 ............... TCCCCCCCCCCCCCC scaffold15459 ScafM INDEL 0010.scaffold00043 115732 1 . A scaffold15459 ScafM INDEL 0010.scaffold00043 115748 1 . A scaffold15459 Both SNP 0010.scaffold00043 115913 1 G C scaffold15459 Both SNP 0010.scaffold00043 115972 1 T C scaffold15459 Both INDEL 0010.scaffold00043 115978 1 A . scaffold15459 ScafM SNP 0010.scaffold00043 116029 2 TA CG scaffold15459 Both SNP 0010.scaffold00043 116059 1 T A scaffold15459 Both SNP 0010.scaffold00043 116106 1 C T scaffold15459 Both SNP 0010.scaffold00043 116184 1 A C scaffold15459 ScafM INDEL 0010.scaffold00043 116243 1 . A scaffold15459 Both INDEL 0010.scaffold00043 116293 1 A . scaffold15459 Both SNP 0010.scaffold00043 116447 1 T G scaffold15459 Both SNP 0010.scaffold00043 116701 1 A T scaffold15459 Both SNP 0010.scaffold00043 116712 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 116856 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 116862 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 116880 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 116888 1 G A scaffold15459 Both SNP 0010.scaffold00043 116944 1 G A scaffold15459 Both SNP 0010.scaffold00043 116983 1 G T scaffold15459 ScafM INDEL 0010.scaffold00043 117061 7 ....... GGCATCA scaffold15459 ScafM SNP 0010.scaffold00043 117074 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 117080 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 117092 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 117168 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 117178 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 122499 1 C T scaffold12487 ScafM INDEL 0010.scaffold00043 122502 1 . T scaffold12487 ScafM SNP 0010.scaffold00043 122506 2 TG AA scaffold12487 ScafM SNP 0010.scaffold00043 122541 1 C G scaffold12487 ScafM SNP 0010.scaffold00043 122555 1 G A scaffold12487 ScafM SNP 0010.scaffold00043 122635 1 C A scaffold12487 ScafM INDEL 0010.scaffold00043 122750 1 G . scaffold12487 ScafM SNP 0010.scaffold00043 122759 1 G A scaffold12487 ScafM INDEL 0010.scaffold00043 127761 2 .. CA scaffold15459 ScafM SNP 0010.scaffold00043 127764 1 C A scaffold15459 ScafM SNP 0010.scaffold00043 127787 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 127807 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 127829 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 127841 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 127848 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 127888 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 127898 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 127931 1 T G scaffold15459 ScafM SNP 0010.scaffold00043 127946 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 127950 1 G C scaffold15459 ScafM SNP 0010.scaffold00043 127970 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128010 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 128299 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 128317 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 128330 1 C A scaffold15459 ScafM INDEL 0010.scaffold00043 128335 1 A . scaffold15459 ScafM SNP 0010.scaffold00043 128346 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 128409 2 TT CC scaffold15459 ScafM SNP 0010.scaffold00043 128413 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128447 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 128475 1 T . scaffold15459 ScafM SNP 0010.scaffold00043 128498 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 128500 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 128545 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 128576 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 128587 6 AGTTTG ...... scaffold15459 ScafM INDEL 0010.scaffold00043 128594 1 A . scaffold15459 ScafM SNP 0010.scaffold00043 128602 1 T G scaffold15459 ScafM SNP 0010.scaffold00043 128627 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128650 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 128687 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128690 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128715 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 128725 2 TT CC scaffold15459 ScafM SNP 0010.scaffold00043 128728 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 128731 1 A C scaffold15459 ScafM SNP 0010.scaffold00043 128751 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 128753 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 128762 1 C G scaffold15459 ScafM INDEL 0010.scaffold00043 128927 2 TT .A scaffold15459 ScafM SNP 0010.scaffold00043 128934 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 128951 4 .... TGAT scaffold15459 ScafM INDEL 0010.scaffold00043 128983 1 . A scaffold15459 ScafM SNP 0010.scaffold00043 129006 1 C A scaffold15459 ScafM SNP 0010.scaffold00043 129015 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 129019 1 T G scaffold15459 ScafM SNP 0010.scaffold00043 129023 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129031 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129074 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 129079 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129085 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 129104 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129119 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 129143 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129154 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129174 1 T G scaffold15459 ScafM SNP 0010.scaffold00043 129183 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129197 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129202 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129204 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129248 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129254 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 129256 2 AG CA scaffold15459 ScafM SNP 0010.scaffold00043 129261 2 TT CG scaffold15459 ScafM SNP 0010.scaffold00043 129265 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129282 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 129288 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 129301 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129311 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129314 1 A T scaffold15459 ScafM SNP 0010.scaffold00043 129327 1 A G scaffold15459 ScafM INDEL 0010.scaffold00043 129338 1 . C scaffold15459 ScafM SNP 0010.scaffold00043 129346 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129364 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 129372 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 129379 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 129396 2 AA .. scaffold15459 ScafM INDEL 0010.scaffold00043 129399 2 CC .. scaffold15459 ScafM INDEL 0010.scaffold00043 129402 1 C . scaffold15459 ScafM SNP 0010.scaffold00043 129406 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129409 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 129435 1 A G scaffold15459 ScafM SNP 0010.scaffold00043 129442 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 129473 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129504 2 AC GT scaffold15459 ScafM SNP 0010.scaffold00043 129513 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129521 2 GC AA scaffold15459 ScafM SNP 0010.scaffold00043 129532 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129539 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129542 1 C T scaffold15459 ScafM SNP 0010.scaffold00043 129570 1 T C scaffold15459 ScafM SNP 0010.scaffold00043 129591 2 CC AT scaffold15459 ScafM INDEL 0010.scaffold00043 130224 1 . T scaffold15459 ScafM SNP 0010.scaffold00043 130231 1 G T scaffold15459 ScafM SNP 0010.scaffold00043 130245 1 T A scaffold15459 ScafM INDEL 0010.scaffold00043 130252 3 ... AAT scaffold15459 ScafM INDEL 0010.scaffold00043 130332 1 . T scaffold15459 ScafM SNP 0010.scaffold00043 130338 1 A T scaffold15459 ScafM INDEL 0010.scaffold00043 130385 1 . A scaffold15459 ScafM INDEL 0010.scaffold00043 131807 1 T . scaffold15459 ScafM SNP 0010.scaffold00043 131830 1 T G scaffold15459 ScafM SNP 0010.scaffold00043 131837 1 C T scaffold15459 Both INDEL 0010.scaffold00043 131913 1 T . scaffold15459 ScafM SNP 0010.scaffold00043 132009 1 T A scaffold15459 ScafM SNP 0010.scaffold00043 132012 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 132022 7 ....... TCACTAA scaffold15459 ScafM INDEL 0010.scaffold00043 132062 2 .. TC scaffold15459 ScafM SNP 0010.scaffold00043 132064 1 A C scaffold15459 ScafM INDEL 0010.scaffold00043 132277 7 ....... ACCAAAA scaffold15459 ScafM SNP 0010.scaffold00043 132283 2 CA TC scaffold15459 ScafM INDEL 0010.scaffold00043 132295 11 ........... TTTTTTTTTTT scaffold15459 ScafM SNP 0010.scaffold00043 132296 2 GG TT scaffold15459 ScafM SNP 0010.scaffold00043 132312 1 G T scaffold15459 ScafM INDEL 0010.scaffold00043 132321 1 A . scaffold15459 ScafM SNP 0010.scaffold00043 132359 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 132460 1 . T scaffold15459 Both INDEL 0010.scaffold00043 132629 1 T . scaffold15459 ScafM INDEL 0010.scaffold00043 132734 1 G . scaffold15459 ScafM SNP 0010.scaffold00043 132751 1 C T scaffold15459 ScafM INDEL 0010.scaffold00043 132761 1 . A scaffold15459 ScafM INDEL 0010.scaffold00043 132929 2 .. TT scaffold15459 ScafM SNP 0010.scaffold00043 132937 1 C G scaffold15459 ScafM SNP 0010.scaffold00043 132955 1 G A scaffold15459 ScafM SNP 0010.scaffold00043 132962 1 T A scaffold15459 Both SNP 0010.scaffold00043 132996 1 T A scaffold15459 Both SNP 0010.scaffold00043 133717 1 C T scaffold15459 Both SNP 0010.scaffold00043 134003 1 C T scaffold15459 Both SNP 0010.scaffold00043 134207 1 G A scaffold15459 Both SNP 0010.scaffold00043 134269 1 C G scaffold15459 Both SNP 0010.scaffold00043 134637 1 T G scaffold15459 Both SNP 0010.scaffold00043 135187 1 T G scaffold15459 Both SNP 0010.scaffold00043 135652 1 T G scaffold15459 ScafM INDEL 0010.scaffold00043 135739 2 TT .. scaffold15459 Both SNP 0010.scaffold00043 135973 1 A G scaffold15459 Both INDEL 0010.scaffold00043 136621 1 . T scaffold15459 Both SNP 0010.scaffold00043 137092 1 T A scaffold15459 Both SNP 0010.scaffold00043 137286 1 A G scaffold15459 Both SNP 0010.scaffold00043 137912 1 G T scaffold15459 Both SNP 0010.scaffold00043 138003 1 C T scaffold15459 Both SNP 0010.scaffold00043 138349 1 T C scaffold15459 Both SNP 0010.scaffold00043 138499 1 G C scaffold15459 Both SNP 0010.scaffold00043 139752 1 T G scaffold15459 ReadM SNP 0010.scaffold00043 140484 1 C T - ReadM SNP 0010.scaffold00043 140543 1 T G - ReadM SNP 0010.scaffold00043 140665 1 C T - ReadM SNP 0010.scaffold00043 141242 1 T C - ScafM SNP 0010.scaffold00043 141503 1 C G scaffold11701 Both SNP 0010.scaffold00043 141617 1 A C scaffold11701 Both SNP 0010.scaffold00043 142157 1 C T scaffold11701 Both SNP 0010.scaffold00043 142359 1 G T scaffold11701 ReadM SNP 0010.scaffold00043 142686 1 T C - Both SNP 0010.scaffold00043 142981 1 C T scaffold11701 Both INDEL 0010.scaffold00043 143184 3 TCC ... scaffold11701 Both SNP 0010.scaffold00043 143341 1 T C scaffold11701 Both SNP 0010.scaffold00043 143439 1 T C scaffold11701 Both SNP 0010.scaffold00043 143872 1 T C scaffold11701 Both SNP 0010.scaffold00043 144046 1 T A scaffold11701 Both SNP 0010.scaffold00043 144784 1 A G scaffold11701 Both SNP 0010.scaffold00043 144899 1 C T scaffold11701 Both SNP 0010.scaffold00043 144906 1 A T scaffold11701 Both SNP 0010.scaffold00043 145117 1 G A scaffold11701 Both SNP 0010.scaffold00043 145368 1 A T scaffold11701 Both SNP 0010.scaffold00043 145414 1 G C scaffold11701 Both SNP 0010.scaffold00043 145579 1 A T scaffold11701 Both SNP 0010.scaffold00043 145601 1 A T scaffold11701 Both SNP 0010.scaffold00043 145634 1 A T scaffold11701 Both SNP 0010.scaffold00043 145925 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 147055 4 TATT .... scaffold11701 ScafM INDEL 0010.scaffold00043 147061 1 C . scaffold11701 ScafM SNP 0010.scaffold00043 147070 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 147100 1 C A scaffold11701 ScafM SNP 0010.scaffold00043 147132 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 147193 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 147344 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 147348 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 147353 1 G C scaffold11701 ScafM INDEL 0010.scaffold00043 147355 1 . C scaffold11701 ScafM SNP 0010.scaffold00043 147361 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 147414 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 147421 2 AC GG scaffold11701 ScafM SNP 0010.scaffold00043 147509 2 AA GT scaffold11701 ScafM SNP 0010.scaffold00043 147641 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 147677 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 148224 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 148227 1 G . scaffold11701 ScafM SNP 0010.scaffold00043 148231 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 148236 1 A C scaffold11701 ScafM INDEL 0010.scaffold00043 148747 1 A . scaffold11701 ReadM SNP 0010.scaffold00043 149069 1 T C - ReadM SNP 0010.scaffold00043 149244 1 T C - ReadM INDEL 0010.scaffold00043 149351 1 . T - ScafM SNP 0010.scaffold00043 149435 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 149460 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 149485 1 G T scaffold11701 ScafM SNP 0010.scaffold00043 149502 1 C T scaffold11701 Both SNP 0010.scaffold00043 149578 1 A C scaffold11701 Both SNP 0010.scaffold00043 149604 1 A G scaffold11701 Both INDEL 0010.scaffold00043 149616 1 A . scaffold11701 ScafM SNP 0010.scaffold00043 149685 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 149702 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 149705 1 T A scaffold11701 ScafM INDEL 0010.scaffold00043 149739 3 ... TAA scaffold11701 ScafM SNP 0010.scaffold00043 149797 1 C A scaffold11701 ScafM INDEL 0010.scaffold00043 149808 7 TTTTTTT ....... scaffold11701 ScafM SNP 0010.scaffold00043 149842 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 149854 1 . T scaffold11701 ScafM SNP 0010.scaffold00043 149866 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 149894 1 A . scaffold11701 Both SNP 0010.scaffold00043 149992 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 150048 1 G C scaffold11701 Both SNP 0010.scaffold00043 150777 1 T C scaffold11701 Both SNP 0010.scaffold00043 150804 1 T G scaffold11701 Both INDEL 0010.scaffold00043 150862 1 . A scaffold11701 ReadM SNP 0010.scaffold00043 151456 1 G A - ReadM SNP 0010.scaffold00043 151622 1 T C - ReadM SNP 0010.scaffold00043 151636 1 C G - ReadM SNP 0010.scaffold00043 152124 1 T G - ReadM SNP 0010.scaffold00043 152346 1 A G - ReadM SNP 0010.scaffold00043 152363 1 C G - ScafM INDEL 0010.scaffold00043 152540 1 . A scaffold11701 Both SNP 0010.scaffold00043 152716 1 T C scaffold11701 Both SNP 0010.scaffold00043 152748 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 152948 2 AA .. scaffold11701 ReadM SNP 0010.scaffold00043 153107 1 G A - ReadM SNP 0010.scaffold00043 153250 1 A C - ReadM SNP 0010.scaffold00043 153320 1 C T - ReadM SNP 0010.scaffold00043 153395 1 G A - ReadM SNP 0010.scaffold00043 153552 1 A T - ReadM SNP 0010.scaffold00043 153562 1 A G - ScafM INDEL 0010.scaffold00043 153831 8 ........ GTCTAATC scaffold11701 ScafM SNP 0010.scaffold00043 154021 2 GG AT scaffold11701 ScafM INDEL 0010.scaffold00043 154023 5 ..... TCTTC scaffold11701 ScafM SNP 0010.scaffold00043 154025 2 AA TT scaffold11701 ScafM INDEL 0010.scaffold00043 154027 1 . C scaffold11701 ScafM INDEL 0010.scaffold00043 154028 1 . A scaffold11701 ScafM SNP 0010.scaffold00043 154031 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 154032 1 . C scaffold11701 ScafM INDEL 0010.scaffold00043 154033 1 . T scaffold11701 ScafM SNP 0010.scaffold00043 154035 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 154037 5 .GCCC TAATT scaffold11701 Both SNP 0010.scaffold00043 154303 1 G C scaffold11701 ScafM SNP 0010.scaffold00043 154322 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 154551 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 154982 3 ACA ... scaffold11701 ScafM SNP 0010.scaffold00043 155009 1 A C scaffold11701 ScafM INDEL 0010.scaffold00043 155155 2 AA .. scaffold11701 ScafM SNP 0010.scaffold00043 155158 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 155177 1 . T scaffold11701 ScafM INDEL 0010.scaffold00043 155219 6 AGAGAC ...... scaffold11701 ScafM SNP 0010.scaffold00043 155226 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 155602 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 155616 1 T G scaffold11701 ScafM SNP 0010.scaffold00043 155623 1 A G scaffold11701 Both SNP 0010.scaffold00043 155715 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 155808 1 T G scaffold11701 ScafM SNP 0010.scaffold00043 156215 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 156278 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 156651 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 157054 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 157171 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 157177 1 G A scaffold11701 ReadM SNP 0010.scaffold00043 157263 1 G A - ReadM SNP 0010.scaffold00043 157284 1 T A - ReadM SNP 0010.scaffold00043 157300 1 G T - ReadM SNP 0010.scaffold00043 157331 1 G T - ReadM SNP 0010.scaffold00043 157350 1 T C - ReadM SNP 0010.scaffold00043 157399 1 C T - ReadM SNP 0010.scaffold00043 157459 1 A C - ReadM SNP 0010.scaffold00043 157475 1 G A - ScafM SNP 0010.scaffold00043 157708 1 C A scaffold11701 ScafM INDEL 0010.scaffold00043 157900 2 TT .. scaffold11701 Both SNP 0010.scaffold00043 157952 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 158041 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 158383 1 G A scaffold11701 Both SNP 0010.scaffold00043 158460 1 T A scaffold11701 Both SNP 0010.scaffold00043 158475 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 158965 1 A C scaffold11701 ScafM INDEL 0010.scaffold00043 158998 5 ..... AACAA scaffold11701 ScafM SNP 0010.scaffold00043 159027 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 159038 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 159044 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 159254 22 ACGATATTAATTGTAAACCATA ...................... scaffold11701 ScafM SNP 0010.scaffold00043 159407 1 T A scaffold11701 ReadM SNP 0010.scaffold00043 159473 1 C G - ScafM INDEL 0010.scaffold00043 159588 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 159593 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 159603 2 GG AA scaffold11701 ScafM SNP 0010.scaffold00043 159635 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 159641 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 159970 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 159996 2 CA .T scaffold11701 ScafM SNP 0010.scaffold00043 159999 1 T A scaffold11701 ScafM INDEL 0010.scaffold00043 160074 1 . A scaffold11701 ScafM INDEL 0010.scaffold00043 160081 1 . A scaffold11701 ScafM SNP 0010.scaffold00043 160112 1 T C scaffold11701 ReadM INDEL 0010.scaffold00043 160290 1 A . - ScafM INDEL 0010.scaffold00043 160290 2 AA .G scaffold11701 Both SNP 0010.scaffold00043 160434 1 A C scaffold11701 Both SNP 0010.scaffold00043 160444 1 C A scaffold11701 Both SNP 0010.scaffold00043 160481 1 G A scaffold11701 Both SNP 0010.scaffold00043 162433 1 A C scaffold11701 Both SNP 0010.scaffold00043 162609 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 164114 8 ........ GGGGGGGG scaffold11701 Both SNP 0010.scaffold00043 165820 1 C A scaffold11701 ScafM INDEL 0010.scaffold00043 167340 1 . T scaffold11701 ScafM INDEL 0010.scaffold00043 168173 48 ................................................ CATATGTAGCTCATCAAACATCTTCCTCAAATTTAACAATCATATTAT scaffold11701 ReadM SNP 0010.scaffold00043 168426 1 A T - ReadM SNP 0010.scaffold00043 169716 1 A G - ReadM SNP 0010.scaffold00043 169735 1 A C - ScafM SNP 0010.scaffold00043 169800 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 169920 2 AG GC scaffold11701 ScafM INDEL 0010.scaffold00043 169922 1 . C scaffold11701 ScafM SNP 0010.scaffold00043 169924 1 G A scaffold11701 Both SNP 0010.scaffold00043 170160 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 170283 36 ATTTTTTTTTCTTCCAAAACACAATACAAAAATAAT .................................... scaffold11701 ScafM SNP 0010.scaffold00043 170355 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 170394 1 T C scaffold11701 Both SNP 0010.scaffold00043 170587 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 170716 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 170750 1 C A scaffold11701 ScafM SNP 0010.scaffold00043 170753 2 TT CC scaffold11701 ScafM INDEL 0010.scaffold00043 170760 4 .... AAAA scaffold11701 ScafM SNP 0010.scaffold00043 170766 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 170775 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 170783 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 170789 1 A . scaffold11701 ScafM SNP 0010.scaffold00043 170805 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 170808 1 G . scaffold11701 ScafM INDEL 0010.scaffold00043 170811 1 C . scaffold11701 ScafM SNP 0010.scaffold00043 170845 2 AC GT scaffold11701 ScafM INDEL 0010.scaffold00043 170850 1 A . scaffold11701 ScafM SNP 0010.scaffold00043 170858 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 170884 3 ... AAA scaffold11701 ScafM SNP 0010.scaffold00043 170886 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 170909 2 AG CT scaffold11701 ScafM SNP 0010.scaffold00043 170915 2 AG TT scaffold11701 ScafM SNP 0010.scaffold00043 170928 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 170948 1 T C scaffold11701 ReadM SNP 0010.scaffold00043 171174 1 T G - ReadM SNP 0010.scaffold00043 171210 1 A G - ReadM SNP 0010.scaffold00043 171372 1 T C - ReadM INDEL 0010.scaffold00043 171386 1 C . - ReadM SNP 0010.scaffold00043 171776 1 G T - ReadM SNP 0010.scaffold00043 171862 1 C T - ReadM SNP 0010.scaffold00043 171869 1 A T - ReadM SNP 0010.scaffold00043 172091 1 A G - ReadM INDEL 0010.scaffold00043 172161 1 . A - ReadM SNP 0010.scaffold00043 172202 1 A T - ReadM SNP 0010.scaffold00043 172357 1 C T - ReadM SNP 0010.scaffold00043 172385 1 T G - ReadM SNP 0010.scaffold00043 172410 1 T A - ReadM SNP 0010.scaffold00043 172412 1 T C - ReadM SNP 0010.scaffold00043 172478 1 A G - ReadM SNP 0010.scaffold00043 172516 1 T A - ReadM SNP 0010.scaffold00043 172623 1 A T - ReadM INDEL 0010.scaffold00043 172737 1 . A - ReadM SNP 0010.scaffold00043 172770 1 A C - ReadM SNP 0010.scaffold00043 172791 1 T A - ReadM SNP 0010.scaffold00043 172796 1 T G - ReadM SNP 0010.scaffold00043 172857 1 T C - ReadM INDEL 0010.scaffold00043 173018 1 . T - ReadM SNP 0010.scaffold00043 173068 1 C A - ReadM SNP 0010.scaffold00043 173681 1 A C - ReadM SNP 0010.scaffold00043 173722 1 T C - ReadM SNP 0010.scaffold00043 173739 1 C G - ReadM SNP 0010.scaffold00043 173757 1 T A - ReadM SNP 0010.scaffold00043 173793 1 T A - ReadM SNP 0010.scaffold00043 173875 1 A G - ReadM SNP 0010.scaffold00043 173931 1 A T - ReadM SNP 0010.scaffold00043 174065 1 G T - ReadM SNP 0010.scaffold00043 174072 1 A T - ReadM SNP 0010.scaffold00043 174131 1 A T - ReadM SNP 0010.scaffold00043 174156 1 T A - ReadM SNP 0010.scaffold00043 174196 1 G C - ReadM SNP 0010.scaffold00043 174317 1 C T - ReadM SNP 0010.scaffold00043 174322 1 A G - ReadM SNP 0010.scaffold00043 174450 1 C T - ReadM SNP 0010.scaffold00043 174514 1 G A - ReadM SNP 0010.scaffold00043 174527 1 G A - ReadM SNP 0010.scaffold00043 174573 1 G A - ReadM SNP 0010.scaffold00043 174706 1 A G - ReadM SNP 0010.scaffold00043 174726 1 G A - ReadM SNP 0010.scaffold00043 174992 1 G A - ReadM SNP 0010.scaffold00043 174997 1 A T - ReadM SNP 0010.scaffold00043 175034 1 A T - ReadM SNP 0010.scaffold00043 175063 1 T G - ReadM SNP 0010.scaffold00043 175193 1 T A - ReadM SNP 0010.scaffold00043 175199 1 C T - ReadM SNP 0010.scaffold00043 175278 1 G A - ReadM SNP 0010.scaffold00043 175777 1 T G - ReadM SNP 0010.scaffold00043 175851 1 C T - ReadM INDEL 0010.scaffold00043 175914 1 . T - ReadM SNP 0010.scaffold00043 176173 1 G A - ReadM SNP 0010.scaffold00043 176175 1 G C - Both SNP 0010.scaffold00043 176872 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 176879 2 TC AT scaffold11701 ScafM INDEL 0010.scaffold00043 176919 1 A . scaffold11701 ScafM INDEL 0010.scaffold00043 177081 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 177091 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 177092 2 .. CG scaffold11701 ScafM SNP 0010.scaffold00043 177108 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 177119 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 177132 2 AG .. scaffold11701 ScafM SNP 0010.scaffold00043 177172 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 177227 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 177228 1 . G scaffold11701 ScafM SNP 0010.scaffold00043 177233 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 177241 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 177245 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 177249 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 177266 3 ... TAT scaffold11701 ScafM INDEL 0010.scaffold00043 177270 3 ... GTG scaffold11701 ScafM INDEL 0010.scaffold00043 177272 1 . A scaffold11701 ScafM INDEL 0010.scaffold00043 177274 24 ........................ TTCTTGTTAATATACTTTTACCCT scaffold11701 ScafM INDEL 0010.scaffold00043 177277 2 .. CA scaffold11701 ScafM SNP 0010.scaffold00043 177286 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 177318 1 G T scaffold11701 ScafM SNP 0010.scaffold00043 177338 1 G C scaffold11701 ScafM SNP 0010.scaffold00043 177342 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 177353 2 TG .. scaffold11701 ScafM SNP 0010.scaffold00043 177356 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 177371 1 T . scaffold11701 ScafM SNP 0010.scaffold00043 177375 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 177379 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 177402 1 C A scaffold11701 ScafM INDEL 0010.scaffold00043 178311 4 .... ATTA scaffold11701 ScafM SNP 0010.scaffold00043 178318 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 178354 1 T G scaffold11701 ScafM INDEL 0010.scaffold00043 178368 3 AGC ... scaffold11701 ScafM SNP 0010.scaffold00043 178380 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 178387 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 178962 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 179012 1 A T scaffold11701 ScafM INDEL 0010.scaffold00043 179044 4 .... AACA scaffold11701 ScafM INDEL 0010.scaffold00043 179046 2 .. AA scaffold11701 ScafM INDEL 0010.scaffold00043 179058 2 TT .. scaffold11701 ScafM SNP 0010.scaffold00043 179063 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 179091 1 A G scaffold11701 Both SNP 0010.scaffold00043 179116 1 C T scaffold11701 Both SNP 0010.scaffold00043 179128 1 A T scaffold11701 Both SNP 0010.scaffold00043 179171 1 A C scaffold11701 Both SNP 0010.scaffold00043 179270 1 A G scaffold11701 Both SNP 0010.scaffold00043 179282 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 179446 3 ... GAC scaffold11701 ReadM INDEL 0010.scaffold00043 179465 3 ... ACT - Both INDEL 0010.scaffold00043 179562 3 GTC ... scaffold11701 ScafM SNP 0010.scaffold00043 179734 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 179744 1 . C scaffold11701 ScafM SNP 0010.scaffold00043 181134 1 G A scaffold11701 Both SNP 0010.scaffold00043 181278 1 T C scaffold11701 ReadM SNP 0010.scaffold00043 181393 1 G A - ReadM SNP 0010.scaffold00043 181401 1 G A - ReadM SNP 0010.scaffold00043 181889 1 T C - ReadM SNP 0010.scaffold00043 181972 1 A G - ScafM SNP 0010.scaffold00043 182379 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 182503 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 182871 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 182876 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 183125 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 183520 1 G C scaffold11701 ScafM INDEL 0010.scaffold00043 183543 8 ........ AATTGAGT scaffold11701 ScafM SNP 0010.scaffold00043 183588 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 183592 1 T G scaffold11701 ScafM SNP 0010.scaffold00043 183624 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 183645 8 ........ AATTTATT scaffold11701 ScafM SNP 0010.scaffold00043 183655 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 183690 2 TC GG scaffold11701 ScafM SNP 0010.scaffold00043 183712 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 183740 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 183785 1 G T scaffold11701 Both INDEL 0010.scaffold00043 183916 1 . T scaffold11701 Both SNP 0010.scaffold00043 184003 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 184033 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 184041 1 G T scaffold11701 ScafM SNP 0010.scaffold00043 184137 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 184144 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 184148 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 184349 1 G A scaffold11701 ScafM INDEL 0010.scaffold00043 184358 1 T . scaffold11701 ScafM INDEL 0010.scaffold00043 184366 4 GTAT .... scaffold11701 ScafM SNP 0010.scaffold00043 184533 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 184537 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 184542 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 184567 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 184576 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 184598 1 T G scaffold11701 ScafM SNP 0010.scaffold00043 184600 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 184907 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 184929 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 184935 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 184940 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 184951 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 184957 2 GC AT scaffold11701 ScafM SNP 0010.scaffold00043 184969 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 184974 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 185021 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 185024 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 185029 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 185049 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 185054 1 C A scaffold11701 ScafM SNP 0010.scaffold00043 185056 1 C G scaffold11701 ScafM SNP 0010.scaffold00043 185060 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 185077 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 185083 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 185085 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 185163 2 TT AA scaffold11701 ScafM INDEL 0010.scaffold00043 185197 3 TAT ... scaffold11701 ScafM SNP 0010.scaffold00043 185218 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 185229 1 G T scaffold11701 ScafM SNP 0010.scaffold00043 185235 1 T A scaffold11701 ScafM SNP 0010.scaffold00043 185240 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 185285 2 CC TA scaffold11701 ScafM INDEL 0010.scaffold00043 185357 10 .......... TGTAGCAACG scaffold11701 ScafM INDEL 0010.scaffold00043 185367 2 .A TT scaffold11701 ScafM SNP 0010.scaffold00043 185381 1 G C scaffold11701 ScafM INDEL 0010.scaffold00043 185402 2 .. CT scaffold11701 ScafM SNP 0010.scaffold00043 185408 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 185439 20 GTTCTATATTGAAGTAGGAC .................... scaffold11701 ScafM INDEL 0010.scaffold00043 185460 1 C . scaffold11701 ScafM INDEL 0010.scaffold00043 185471 8 ATCAAATC ........ scaffold11701 ScafM SNP 0010.scaffold00043 185515 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 185901 4 .... TTTA scaffold11701 ScafM INDEL 0010.scaffold00043 185903 9 ........C TGTATAAAT scaffold11701 ScafM INDEL 0010.scaffold00043 185906 2 .. CC scaffold11701 ScafM SNP 0010.scaffold00043 185928 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 185931 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 185959 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 185976 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 185982 1 C T scaffold11701 ScafM INDEL 0010.scaffold00043 185986 2 TT .C scaffold11701 ScafM SNP 0010.scaffold00043 185993 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 185996 1 A C scaffold11701 ScafM SNP 0010.scaffold00043 185999 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 186001 1 A G scaffold11701 ScafM INDEL 0010.scaffold00043 186023 1 T . scaffold11701 ScafM INDEL 0010.scaffold00043 186049 1 . A scaffold11701 ScafM SNP 0010.scaffold00043 186056 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 186063 1 G C scaffold11701 ScafM SNP 0010.scaffold00043 186093 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 186100 1 A G scaffold11701 ScafM SNP 0010.scaffold00043 186787 1 T C scaffold11701 ScafM SNP 0010.scaffold00043 186803 1 A T scaffold11701 ScafM SNP 0010.scaffold00043 186846 1 C T scaffold11701 ScafM SNP 0010.scaffold00043 186850 1 G A scaffold11701 ScafM SNP 0010.scaffold00043 186958 1 G C scaffold11701 ScafM SNP 0010.scaffold00043 186975 1 C A scaffold11701 ScafM SNP 0010.scaffold00043 186982 1 T C scaffold11701 ScafM INDEL 0010.scaffold00043 186986 1 C . scaffold11701 ReadM SNP 0010.scaffold00043 188801 1 T C - ReadM SNP 0010.scaffold00043 188818 1 C A - ReadM SNP 0010.scaffold00043 188830 1 C A - ScafM SNP 0010.scaffold00043 190556 1 G A scaffold2490 ScafM SNP 0010.scaffold00043 190568 1 A G scaffold2490 ScafM INDEL 0010.scaffold00043 190570 1 A . scaffold2490 ScafM SNP 0010.scaffold00043 190574 1 C T scaffold2490 ScafM SNP 0010.scaffold00043 190583 1 A G scaffold2490 ScafM SNP 0010.scaffold00043 190594 1 G A scaffold2490 ScafM SNP 0010.scaffold00043 190679 1 C A scaffold2490 ScafM SNP 0010.scaffold00043 190691 1 C T scaffold2490 ScafM SNP 0010.scaffold00043 190737 1 G T scaffold2490 ScafM SNP 0010.scaffold00043 190796 1 G A scaffold2490 ScafM INDEL 0010.scaffold00043 190833 5 TGGAA ..... scaffold2490 ScafM SNP 0010.scaffold00043 190861 1 T C scaffold2490 ScafM SNP 0010.scaffold00043 190878 1 C G scaffold2490 ScafM SNP 0010.scaffold00043 190902 1 C T scaffold2490 ScafM INDEL 0010.scaffold00043 190918 1 . T scaffold2490 ScafM SNP 0010.scaffold00043 190926 3 CAA ATC scaffold2490 ScafM SNP 0010.scaffold00043 190963 1 A C scaffold2490 ScafM SNP 0010.scaffold00043 190982 1 G T scaffold2490 ScafM SNP 0010.scaffold00043 191104 1 G A scaffold2490 ScafM SNP 0010.scaffold00043 191129 1 T G scaffold2490 ScafM SNP 0010.scaffold00043 191149 1 G A scaffold2490 ScafM SNP 0010.scaffold00043 191200 1 C G scaffold2490 ScafM SNP 0010.scaffold00043 191210 1 G A scaffold2490 ScafM SNP 0010.scaffold00043 191219 1 T G scaffold2490 ScafM SNP 0010.scaffold00043 191253 1 A G scaffold2490 ScafM SNP 0010.scaffold00043 191261 1 T G scaffold2490 ScafM SNP 0010.scaffold00043 203442 1 T C scaffold25151 ScafM SNP 0010.scaffold00043 203450 1 C G scaffold25151 ScafM SNP 0010.scaffold00043 205986 2 GA CC scaffold11701 ScafM SNP 0010.scaffold00043 206052 1 G A scaffold11701 ReadM SNP 0010.scaffold00043 206525 1 G A - ReadM SNP 0010.scaffold00043 206797 1 G A - Both SNP 0010.scaffold00043 206994 1 G C scaffold11701 ScafM INDEL 0010.scaffold00043 207168 1 T . scaffold11701 Both SNP 0010.scaffold00043 207195 1 A T scaffold11701 Both SNP 0010.scaffold00043 208873 1 C G scaffold11933 Both SNP 0010.scaffold00043 208946 1 C T scaffold11933 Both SNP 0010.scaffold00043 208955 1 G A scaffold11933 Both SNP 0010.scaffold00043 209096 1 A G scaffold11933 Both SNP 0010.scaffold00043 209144 1 T A scaffold11933 Both SNP 0010.scaffold00043 209170 1 C G scaffold11933 Both SNP 0010.scaffold00043 209202 1 A G scaffold11933 ReadM SNP 0010.scaffold00043 209362 1 A G - Both SNP 0010.scaffold00043 209405 1 T A scaffold11933 Both INDEL 0010.scaffold00043 209416 1 . A scaffold11933 Both SNP 0010.scaffold00043 209447 1 G A scaffold11933 Both SNP 0010.scaffold00043 209527 1 A G scaffold11933 Both SNP 0010.scaffold00043 209585 1 G A scaffold11933 ScafM SNP 0010.scaffold00043 209619 2 CC TT scaffold11933 Both SNP 0010.scaffold00043 209639 1 G A scaffold11933 Both SNP 0010.scaffold00043 209732 1 T G scaffold11933 Both SNP 0010.scaffold00043 209771 1 G A scaffold11933 Both SNP 0010.scaffold00043 209798 1 A G scaffold11933 Both SNP 0010.scaffold00043 209969 1 T C scaffold11933 ScafM SNP 0010.scaffold00043 210005 1 A G scaffold11933 Both SNP 0010.scaffold00043 210079 1 A G scaffold11933 Both SNP 0010.scaffold00043 210209 1 G A scaffold11933 Both SNP 0010.scaffold00043 210220 1 T A scaffold11933 Both SNP 0010.scaffold00043 210312 1 A T scaffold11933 Both SNP 0010.scaffold00043 210327 1 A C scaffold11933 Both SNP 0010.scaffold00043 210348 1 A G scaffold11933 ReadM SNP 0010.scaffold00043 210484 1 C T - ReadM SNP 0010.scaffold00043 210605 1 A G - ReadM SNP 0010.scaffold00043 210968 1 C T - ReadM SNP 0010.scaffold00043 211145 1 A G - Both SNP 0010.scaffold00043 211204 1 A G scaffold11933 ScafM INDEL 0010.scaffold00043 211276 1 A . scaffold11933 ScafM INDEL 0010.scaffold00043 211439 7 AGTTATA ....... scaffold11933 ScafM INDEL 0010.scaffold00043 211575 3 ... AAG scaffold11933 ReadM SNP 0010.scaffold00043 211720 1 A G - ReadM SNP 0010.scaffold00043 211790 1 A G - Both INDEL 0010.scaffold00043 212080 3 AAA ... scaffold11933 Both SNP 0010.scaffold00043 212219 1 G T scaffold11933 ScafM INDEL 0010.scaffold00043 212697 1 A . scaffold25151 ReadM SNP 0010.scaffold00043 213097 1 G A - ReadM SNP 0010.scaffold00043 213131 1 C G - ReadM SNP 0010.scaffold00043 213174 1 A T - ScafM INDEL 0010.scaffold00043 213591 2 .. TT scaffold25151 Both SNP 0010.scaffold00043 214180 1 A G scaffold25151 ScafM SNP 0010.scaffold00043 214232 1 C T scaffold25151 Both SNP 0010.scaffold00043 214272 1 G A scaffold25151 Both INDEL 0010.scaffold00043 214304 1 A . scaffold25151 ScafM SNP 0010.scaffold00043 214350 1 G A scaffold25151 ReadM INDEL 0010.scaffold00043 214534 1 . C - ReadM SNP 0010.scaffold00043 214661 1 A G - ScafM INDEL 0010.scaffold00043 214752 1 C . scaffold25151 ReadM SNP 0010.scaffold00043 214833 1 T G - ReadM SNP 0010.scaffold00043 214863 1 T C - ReadM SNP 0010.scaffold00043 214893 1 T C - Both SNP 0010.scaffold00043 214992 1 C T scaffold25151 Both SNP 0010.scaffold00043 215041 1 A G scaffold25151 Both SNP 0010.scaffold00043 215313 1 A T scaffold25151 ReadM SNP 0010.scaffold00043 215595 1 T A - ReadM SNP 0010.scaffold00043 215723 1 C T - ReadM SNP 0010.scaffold00043 215738 1 A G - ReadM SNP 0010.scaffold00043 215772 1 G A - ReadM SNP 0010.scaffold00043 215794 1 G A - ReadM SNP 0010.scaffold00043 215817 1 G A - ReadM SNP 0010.scaffold00043 215857 1 G A - ReadM SNP 0010.scaffold00043 215898 1 T A - ReadM SNP 0010.scaffold00043 215915 1 T C - ReadM SNP 0010.scaffold00043 215921 1 A G - ReadM SNP 0010.scaffold00043 216008 1 G A - Both SNP 0010.scaffold00043 216048 1 A G scaffold25151 Both SNP 0010.scaffold00043 216052 1 A G scaffold25151 ScafM SNP 0010.scaffold00043 216095 1 G A scaffold25151 ScafM SNP 0010.scaffold00043 216103 1 A G scaffold25151 ScafM SNP 0010.scaffold00043 216106 1 C T scaffold25151 ScafM SNP 0010.scaffold00043 216125 1 A G scaffold25151 ReadM SNP 0010.scaffold00043 216168 1 G A - ReadM SNP 0010.scaffold00043 216195 1 C T - ReadM SNP 0010.scaffold00043 216240 1 T C - ReadM SNP 0010.scaffold00043 216261 1 A G - ReadM SNP 0010.scaffold00043 216296 1 G C - ReadM SNP 0010.scaffold00043 216338 1 T C - ScafM SNP 0010.scaffold00043 216494 1 A C scaffold25151 ScafM SNP 0010.scaffold00043 216498 1 C T scaffold25151 ScafM SNP 0010.scaffold00043 216522 1 C G scaffold25151 ScafM SNP 0010.scaffold00043 216536 1 G A scaffold25151 ScafM SNP 0010.scaffold00043 216549 1 T G scaffold25151 ScafM SNP 0010.scaffold00043 216551 1 T A scaffold25151 ScafM INDEL 0010.scaffold00043 216571 3 ATT ... scaffold25151 ScafM SNP 0010.scaffold00043 216625 1 C G scaffold25151 ScafM SNP 0010.scaffold00043 216643 1 G A scaffold25151 ScafM SNP 0010.scaffold00043 216663 1 C T scaffold25151 ScafM SNP 0010.scaffold00043 216699 1 G A scaffold25151 ScafM SNP 0010.scaffold00043 216704 1 C A scaffold25151 Both SNP 0010.scaffold00043 216738 1 C A scaffold25151 Both SNP 0010.scaffold00043 216742 1 A T scaffold25151 Both SNP 0010.scaffold00043 216790 1 C A scaffold25151 Both INDEL 0010.scaffold00043 216899 2 .. AT scaffold25151 Both SNP 0010.scaffold00043 216938 1 A G scaffold25151 Both SNP 0010.scaffold00043 216955 1 A T scaffold25151 ScafM INDEL 0010.scaffold00043 217070 5 ..... TAAAT scaffold25151 ScafM SNP 0010.scaffold00043 217083 1 C T scaffold25151 ReadM SNP 0010.scaffold00043 217714 1 T C - ReadM SNP 0010.scaffold00043 217873 1 A T - ReadM SNP 0010.scaffold00043 217903 1 C T - ReadM INDEL 0010.scaffold00043 217917 1 G . - ReadM SNP 0010.scaffold00043 218042 1 C T - ReadM SNP 0010.scaffold00043 218135 1 T C - ReadM SNP 0010.scaffold00043 218142 1 G A - ReadM SNP 0010.scaffold00043 218252 1 G T - ScafM SNP 0010.scaffold00043 218902 1 G T scaffold25151 ScafM SNP 0010.scaffold00043 218904 1 A G scaffold25151 ScafM SNP 0010.scaffold00043 218914 1 G A scaffold25151 ScafM SNP 0010.scaffold00043 218916 1 G T scaffold25151 ScafM SNP 0010.scaffold00043 218940 1 A C scaffold25151 ReadM SNP 0010.scaffold00043 219702 1 C T - ReadM SNP 0010.scaffold00043 219723 1 A C - ScafM INDEL 0010.scaffold00043 241373 1 T . scaffold15632 ScafM INDEL 0010.scaffold00043 241378 1 T . scaffold15632 ScafM INDEL 0010.scaffold00043 241383 1 A . scaffold15632 ScafM INDEL 0010.scaffold00043 248279 3 ... AAA scaffold15632 ScafM INDEL 0010.scaffold00043 248767 1 . A scaffold15632 ScafM INDEL 0010.scaffold00043 248787 1 . T scaffold15632 ScafM INDEL 0010.scaffold00043 265276 6 ...... TTTTTT scaffold15632 ScafM INDEL 0010.scaffold00043 265278 4 .... AAAT scaffold15632 ScafM INDEL 0010.scaffold00043 265279 2 .. AA scaffold15632 ScafM INDEL 0010.scaffold00043 265281 1 . A scaffold15632 ScafM SNP 0010.scaffold00043 265504 2 CA TG scaffold15632 ScafM SNP 0010.scaffold00043 265513 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 265610 1 A C scaffold15632 ScafM SNP 0010.scaffold00043 265637 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 265644 1 A T scaffold15632 ReadM INDEL 0010.scaffold00043 265730 1 A . - ScafM SNP 0010.scaffold00043 266676 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 266701 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 266705 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 266718 2 AT GC scaffold15632 ScafM SNP 0010.scaffold00043 266729 1 G A scaffold15632 ScafM INDEL 0010.scaffold00043 266738 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 266752 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 266798 6 AGTATT GCCCCA scaffold15632 ScafM SNP 0010.scaffold00043 266806 1 C G scaffold15632 ScafM SNP 0010.scaffold00043 266812 2 AG GA scaffold15632 ScafM INDEL 0010.scaffold00043 266984 10 TTTCTCTCTC .......... scaffold15632 Both SNP 0010.scaffold00043 267105 1 A G scaffold15632 ScafM INDEL 0010.scaffold00043 267336 5 ..... TAAAA scaffold15632 ScafM SNP 0010.scaffold00043 267338 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 267404 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 267410 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 267415 1 . T scaffold15632 ReadM SNP 0010.scaffold00043 267698 1 C T - ReadM SNP 0010.scaffold00043 267767 1 C A - ReadM SNP 0010.scaffold00043 267822 1 T A - ReadM SNP 0010.scaffold00043 267890 1 A G - ReadM SNP 0010.scaffold00043 267893 1 T C - ReadM SNP 0010.scaffold00043 267945 1 T C - ReadM SNP 0010.scaffold00043 268013 1 C T - ReadM INDEL 0010.scaffold00043 268046 1 . T - Both SNP 0010.scaffold00043 268076 1 A G scaffold15632 ReadM INDEL 0010.scaffold00043 268719 1 A . - Both SNP 0010.scaffold00043 268990 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 269152 1 A G scaffold15632 Both SNP 0010.scaffold00043 269184 1 G A scaffold15632 ReadM SNP 0010.scaffold00043 269254 1 G A - ReadM SNP 0010.scaffold00043 269270 1 G A - ReadM SNP 0010.scaffold00043 269272 1 T A - ReadM SNP 0010.scaffold00043 269369 1 C T - ReadM SNP 0010.scaffold00043 269379 1 A G - ReadM INDEL 0010.scaffold00043 269402 1 C . - ScafM SNP 0010.scaffold00043 269507 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 269532 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 269535 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 269550 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 269554 1 G C scaffold15632 ScafM SNP 0010.scaffold00043 269602 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 269630 2 CA TC scaffold15632 Both SNP 0010.scaffold00043 269670 1 A G scaffold15632 Both SNP 0010.scaffold00043 269699 1 T A scaffold15632 ScafM SNP 0010.scaffold00043 269789 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 269810 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 269830 1 G C scaffold15632 ScafM SNP 0010.scaffold00043 269837 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 269847 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 269856 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 269872 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 269891 1 G A scaffold15632 ScafM INDEL 0010.scaffold00043 269900 5 TTCTC ..... scaffold15632 ScafM INDEL 0010.scaffold00043 269908 2 AC .. scaffold15632 ScafM SNP 0010.scaffold00043 269961 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 269966 2 AT CC scaffold15632 ScafM SNP 0010.scaffold00043 269971 1 T G scaffold15632 ScafM SNP 0010.scaffold00043 269991 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 269996 2 TG CA scaffold15632 ScafM SNP 0010.scaffold00043 270004 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 270024 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 270256 9 ATTTTGAAA ......... scaffold15632 Both SNP 0010.scaffold00043 270379 1 C A scaffold15632 Both SNP 0010.scaffold00043 270485 2 GT CC scaffold15632 Both INDEL 0010.scaffold00043 270490 1 . T scaffold15632 Both SNP 0010.scaffold00043 270571 1 A G scaffold15632 Both SNP 0010.scaffold00043 270709 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 270724 1 C T scaffold15632 ReadM SNP 0010.scaffold00043 271449 1 A C - ReadM INDEL 0010.scaffold00043 271461 1 T . - ReadM SNP 0010.scaffold00043 271513 1 G T - ReadM SNP 0010.scaffold00043 271548 1 G A - ReadM SNP 0010.scaffold00043 271811 1 C T - ReadM SNP 0010.scaffold00043 271824 1 G A - ReadM SNP 0010.scaffold00043 271916 1 G C - ReadM SNP 0010.scaffold00043 271971 1 G T - ReadM INDEL 0010.scaffold00043 272551 1 C . - ReadM SNP 0010.scaffold00043 272622 1 G C - ReadM SNP 0010.scaffold00043 272666 1 T C - ReadM SNP 0010.scaffold00043 272669 1 C T - ScafM SNP 0010.scaffold00043 272830 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 272835 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 272840 1 T C scaffold15632 Both SNP 0010.scaffold00043 272882 1 A T scaffold15632 Both SNP 0010.scaffold00043 272900 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 272937 1 C . scaffold15632 ScafM INDEL 0010.scaffold00043 272952 1 G . scaffold15632 ScafM INDEL 0010.scaffold00043 272954 1 T . scaffold15632 ScafM SNP 0010.scaffold00043 272991 1 T G scaffold15632 ScafM SNP 0010.scaffold00043 273010 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 273013 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 273015 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 273045 1 A C scaffold15632 ScafM SNP 0010.scaffold00043 273061 2 AA GC scaffold15632 ScafM SNP 0010.scaffold00043 273066 1 A C scaffold15632 Both SNP 0010.scaffold00043 273163 1 C G scaffold15632 Both INDEL 0010.scaffold00043 273313 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 273321 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 273373 7 AGTCAAG ....... scaffold15632 Both SNP 0010.scaffold00043 273468 1 C A scaffold15632 Both SNP 0010.scaffold00043 273512 1 C G scaffold15632 Both SNP 0010.scaffold00043 273585 1 G A scaffold15632 Both SNP 0010.scaffold00043 273600 1 T C scaffold15632 Both SNP 0010.scaffold00043 273706 1 A T scaffold15632 Both SNP 0010.scaffold00043 273724 1 T C scaffold15632 Both SNP 0010.scaffold00043 273733 1 C T scaffold15632 Both SNP 0010.scaffold00043 273919 1 A G scaffold15632 Both SNP 0010.scaffold00043 274009 1 G A scaffold15632 Both SNP 0010.scaffold00043 274089 1 C A scaffold15632 Both SNP 0010.scaffold00043 274394 1 T A scaffold15632 Both SNP 0010.scaffold00043 274512 1 C T scaffold15632 Both SNP 0010.scaffold00043 274861 1 G A scaffold15632 Both SNP 0010.scaffold00043 274873 1 C G scaffold15632 Both SNP 0010.scaffold00043 274894 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 274943 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 274950 1 T C scaffold15632 Both SNP 0010.scaffold00043 274971 1 G A scaffold15632 Both SNP 0010.scaffold00043 274998 1 C T scaffold15632 Both SNP 0010.scaffold00043 275095 1 C T scaffold15632 ReadM SNP 0010.scaffold00043 275143 1 A C - ReadM SNP 0010.scaffold00043 275429 1 G A - Both SNP 0010.scaffold00043 275745 1 A T scaffold15632 Both SNP 0010.scaffold00043 275776 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 276414 1 T A scaffold15632 ScafM INDEL 0010.scaffold00043 276423 6 ...... GAACCC scaffold15632 ScafM SNP 0010.scaffold00043 276450 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 276735 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 276773 1 A T scaffold15632 ReadM SNP 0010.scaffold00043 277339 1 G A - Both SNP 0010.scaffold00043 277395 1 G A scaffold15632 Both SNP 0010.scaffold00043 277433 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 277677 1 G A scaffold15632 ScafM INDEL 0010.scaffold00043 277837 5 CGTTA ..... scaffold15632 Both SNP 0010.scaffold00043 278041 1 C T scaffold15632 Both SNP 0010.scaffold00043 278066 1 T C scaffold15632 Both SNP 0010.scaffold00043 278154 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 278329 1 A C scaffold15632 ScafM INDEL 0010.scaffold00043 278383 2 .. AA scaffold15632 ScafM SNP 0010.scaffold00043 278385 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 278389 1 T A scaffold15632 ScafM SNP 0010.scaffold00043 278772 1 G T scaffold15632 Both SNP 0010.scaffold00043 278856 1 G A scaffold15632 ReadM SNP 0010.scaffold00043 279152 1 G A - ReadM SNP 0010.scaffold00043 279188 1 G A - ReadM SNP 0010.scaffold00043 279212 1 C A - ScafM INDEL 0010.scaffold00043 279324 1 . T scaffold15632 ScafM SNP 0010.scaffold00043 279538 2 GT AC scaffold15632 ScafM INDEL 0010.scaffold00043 279597 1 . T scaffold15632 ScafM SNP 0010.scaffold00043 279626 2 CA TG scaffold15632 ScafM SNP 0010.scaffold00043 279716 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 279732 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 279735 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 279738 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 279741 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 279750 1 C T scaffold15632 ScafM INDEL 0010.scaffold00043 279752 1 . T scaffold15632 ScafM SNP 0010.scaffold00043 279758 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 279776 3 ACA GTG scaffold15632 ScafM SNP 0010.scaffold00043 279801 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 279806 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 279811 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 279820 1 A C scaffold15632 ScafM SNP 0010.scaffold00043 279823 1 T A scaffold15632 ScafM SNP 0010.scaffold00043 279864 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 279885 2 CT AA scaffold15632 ScafM SNP 0010.scaffold00043 279893 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 279933 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 279936 1 C T scaffold15632 ScafM INDEL 0010.scaffold00043 279946 1 . G scaffold15632 ScafM SNP 0010.scaffold00043 279948 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 279950 1 G C scaffold15632 ScafM INDEL 0010.scaffold00043 279987 1 C . scaffold15632 ScafM SNP 0010.scaffold00043 280010 1 A C scaffold15632 ScafM SNP 0010.scaffold00043 280253 1 G A scaffold15632 Both SNP 0010.scaffold00043 280335 1 C A scaffold15632 Both INDEL 0010.scaffold00043 280337 1 C . scaffold15632 Both SNP 0010.scaffold00043 280393 1 T C scaffold15632 Both INDEL 0010.scaffold00043 280408 1 . G scaffold15632 Both SNP 0010.scaffold00043 280441 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 280472 1 G C scaffold15632 Both INDEL 0010.scaffold00043 280486 1 T . scaffold15632 Both SNP 0010.scaffold00043 280608 1 G A scaffold15632 Both INDEL 0010.scaffold00043 280659 2 .. AG scaffold15632 ScafM SNP 0010.scaffold00043 280713 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 280715 1 A G scaffold15632 ScafM INDEL 0010.scaffold00043 280719 5 ..... AACTA scaffold15632 ScafM SNP 0010.scaffold00043 280739 2 TG AA scaffold15632 Both SNP 0010.scaffold00043 280795 1 G T scaffold15632 Both SNP 0010.scaffold00043 280823 1 A G scaffold15632 Both SNP 0010.scaffold00043 280874 1 A C scaffold15632 Both SNP 0010.scaffold00043 280938 1 G A scaffold15632 Both SNP 0010.scaffold00043 280947 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 281012 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 281029 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 281117 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 281172 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 281185 2 AA .T scaffold15632 ScafM SNP 0010.scaffold00043 281188 1 C T scaffold15632 ScafM INDEL 0010.scaffold00043 281209 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 281249 1 C T scaffold15632 ScafM INDEL 0010.scaffold00043 281336 2 .. AC scaffold15632 ScafM SNP 0010.scaffold00043 281345 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 281362 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 281399 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 281405 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 281453 1 C G scaffold15632 ScafM SNP 0010.scaffold00043 281462 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 281551 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 281760 1 G A scaffold15632 ScafM INDEL 0010.scaffold00043 281764 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 281787 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 281789 1 T C scaffold15632 Both INDEL 0010.scaffold00043 281880 2 .. AT scaffold15632 Both SNP 0010.scaffold00043 281901 1 T A scaffold15632 Both SNP 0010.scaffold00043 281962 1 C A scaffold15632 Both SNP 0010.scaffold00043 282081 1 A C scaffold15632 Both SNP 0010.scaffold00043 282110 1 T A scaffold15632 ScafM INDEL 0010.scaffold00043 282135 2 .. TA scaffold15632 ScafM SNP 0010.scaffold00043 282148 1 T G scaffold15632 ScafM SNP 0010.scaffold00043 282154 1 T A scaffold15632 ScafM SNP 0010.scaffold00043 282164 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 282166 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 282168 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 282228 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 282233 1 A T scaffold15632 Both SNP 0010.scaffold00043 282283 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 282297 1 A G scaffold15632 Both SNP 0010.scaffold00043 282448 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 282559 1 T A scaffold15632 ScafM SNP 0010.scaffold00043 282562 2 TG GT scaffold15632 ScafM SNP 0010.scaffold00043 282565 1 G T scaffold15632 Both SNP 0010.scaffold00043 282639 1 C G scaffold15632 Both INDEL 0010.scaffold00043 282641 1 . A scaffold15632 ScafM SNP 0010.scaffold00043 282831 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 282845 76 ACTCCCTCATTTGTAAAATGAGTGTTCTAGTTAAAGGTCCCAATATATGAAACTACCTAAGCAACTTGTCTAATTC ............................................................................ scaffold15632 ScafM INDEL 0010.scaffold00043 282923 4 AAAA .... scaffold15632 ScafM INDEL 0010.scaffold00043 282931 2 TC .. scaffold15632 ScafM SNP 0010.scaffold00043 282964 2 AA GC scaffold15632 ScafM SNP 0010.scaffold00043 282991 1 A G scaffold15632 Both SNP 0010.scaffold00043 283006 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 283130 1 A C scaffold15632 ScafM SNP 0010.scaffold00043 283138 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 283151 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 283176 1 C G scaffold15632 ScafM SNP 0010.scaffold00043 283186 1 T C scaffold15632 Both SNP 0010.scaffold00043 283198 1 C G scaffold15632 Both SNP 0010.scaffold00043 283272 1 G C scaffold15632 ScafM SNP 0010.scaffold00043 283303 2 GT CC scaffold15632 Both SNP 0010.scaffold00043 283420 1 T A scaffold15632 Both SNP 0010.scaffold00043 283561 1 C A scaffold15632 ScafM SNP 0010.scaffold00043 283658 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 284117 1 C T scaffold15632 Both SNP 0010.scaffold00043 284493 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 284573 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 284650 2 TC AA scaffold15632 ScafM INDEL 0010.scaffold00043 284843 1 . T scaffold15632 Both SNP 0010.scaffold00043 284969 1 C A scaffold15632 Both SNP 0010.scaffold00043 284996 1 G A scaffold15632 Both SNP 0010.scaffold00043 285129 1 T G scaffold15632 ScafM SNP 0010.scaffold00043 285159 1 C A scaffold15632 Both SNP 0010.scaffold00043 285192 1 C T scaffold15632 Both SNP 0010.scaffold00043 285201 1 A G scaffold15632 Both SNP 0010.scaffold00043 285253 1 G C scaffold15632 Both SNP 0010.scaffold00043 285380 1 G A scaffold15632 Both SNP 0010.scaffold00043 285771 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 285981 3 AAC GTT scaffold15632 ScafM INDEL 0010.scaffold00043 286142 6 ACTGAG ...... scaffold15632 Both SNP 0010.scaffold00043 286152 1 C T scaffold15632 Both SNP 0010.scaffold00043 286380 1 A G scaffold15632 Both SNP 0010.scaffold00043 286573 1 T C scaffold15632 Both SNP 0010.scaffold00043 286853 1 G T scaffold15632 Both SNP 0010.scaffold00043 286899 1 G A scaffold15632 Both SNP 0010.scaffold00043 286938 1 G C scaffold15632 ScafM SNP 0010.scaffold00043 287102 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 287123 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 287128 1 G C scaffold15632 ScafM SNP 0010.scaffold00043 287132 1 A T scaffold15632 ReadM SNP 0010.scaffold00043 287445 1 G A - ReadM SNP 0010.scaffold00043 287499 1 G A - Both SNP 0010.scaffold00043 287770 1 A T scaffold15632 Both SNP 0010.scaffold00043 287821 1 C G scaffold15632 Both SNP 0010.scaffold00043 287891 1 A C scaffold15632 Both SNP 0010.scaffold00043 287993 1 A C scaffold15632 Both SNP 0010.scaffold00043 288026 1 T A scaffold15632 Both SNP 0010.scaffold00043 288111 1 T G scaffold15632 Both SNP 0010.scaffold00043 288236 1 G T scaffold15632 Both SNP 0010.scaffold00043 288325 1 T C scaffold15632 Both SNP 0010.scaffold00043 288346 1 A G scaffold15632 Both INDEL 0010.scaffold00043 288351 1 A . scaffold15632 ScafM SNP 0010.scaffold00043 288505 1 C T scaffold15632 ScafM INDEL 0010.scaffold00043 288519 4 TTAC .... scaffold15632 ScafM SNP 0010.scaffold00043 288538 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 288611 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 288617 1 T G scaffold15632 ScafM SNP 0010.scaffold00043 288633 1 T A scaffold15632 ScafM INDEL 0010.scaffold00043 288658 1 C . scaffold15632 ScafM SNP 0010.scaffold00043 288688 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 288709 1 G A scaffold15632 ScafM INDEL 0010.scaffold00043 288730 1 T . scaffold15632 ScafM SNP 0010.scaffold00043 288742 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 288767 1 A C scaffold15632 ScafM INDEL 0010.scaffold00043 288810 2 CT .. scaffold15632 ScafM SNP 0010.scaffold00043 288822 1 A T scaffold15632 ScafM SNP 0010.scaffold00043 288831 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 288849 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 288858 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 288861 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 288866 2 GG AA scaffold15632 ScafM SNP 0010.scaffold00043 288871 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 288884 2 CG TC scaffold15632 ScafM SNP 0010.scaffold00043 288894 1 T C scaffold15632 ReadM SNP 0010.scaffold00043 289104 1 G A - ScafM SNP 0010.scaffold00043 289546 1 T A scaffold15632 ReadM SNP 0010.scaffold00043 289705 1 T C - Both SNP 0010.scaffold00043 289890 1 G A scaffold15632 ScafM SNP 0010.scaffold00043 290135 1 A G scaffold15632 Both SNP 0010.scaffold00043 290195 1 C A scaffold15632 Both SNP 0010.scaffold00043 290230 1 G A scaffold15632 Both SNP 0010.scaffold00043 290437 1 C T scaffold15632 Both SNP 0010.scaffold00043 290445 1 C G scaffold15632 ScafM SNP 0010.scaffold00043 290983 2 CG AA scaffold15632 Both SNP 0010.scaffold00043 291096 1 T C scaffold15632 Both SNP 0010.scaffold00043 291167 1 A G scaffold15632 Both SNP 0010.scaffold00043 291498 1 A G scaffold15632 ScafM INDEL 0010.scaffold00043 292070 4 .... ATTG scaffold15632 Both SNP 0010.scaffold00043 292091 1 G A scaffold15632 Both SNP 0010.scaffold00043 292447 1 A G scaffold15632 Both INDEL 0010.scaffold00043 292676 3 ... TAT scaffold15632 ScafM SNP 0010.scaffold00043 292800 1 T C scaffold15632 ScafM SNP 0010.scaffold00043 292833 1 A G scaffold15632 ScafM SNP 0010.scaffold00043 292850 1 C T scaffold15632 ReadM SNP 0010.scaffold00043 293003 1 T G - ReadM SNP 0010.scaffold00043 293056 1 T C - ScafM SNP 0010.scaffold00043 293191 1 T C scaffold15632 Both SNP 0010.scaffold00043 293227 1 T A scaffold15632 ReadM SNP 0010.scaffold00043 293280 1 T A - Both SNP 0010.scaffold00043 294106 1 A G scaffold15632 Both SNP 0010.scaffold00043 294497 1 T A scaffold15632 Both SNP 0010.scaffold00043 295264 1 A G scaffold15632 Both SNP 0010.scaffold00043 295300 1 T C scaffold15632 Both SNP 0010.scaffold00043 295365 1 G T scaffold15632 ReadM SNP 0010.scaffold00043 295489 1 C T - ReadM SNP 0010.scaffold00043 295506 1 C A - ReadM SNP 0010.scaffold00043 295722 1 G A - ReadM SNP 0010.scaffold00043 295785 1 A G - ReadM SNP 0010.scaffold00043 295825 1 C T - ReadM SNP 0010.scaffold00043 295838 1 T A - ReadM SNP 0010.scaffold00043 295886 1 A G - Both SNP 0010.scaffold00043 296041 1 G A scaffold15632 Both SNP 0010.scaffold00043 296166 1 T C scaffold15632 Both SNP 0010.scaffold00043 296206 1 A T scaffold15632 Both SNP 0010.scaffold00043 296305 1 G A scaffold15632 Both SNP 0010.scaffold00043 296440 1 G A scaffold15632 ReadM SNP 0010.scaffold00043 296617 1 A C - ReadM SNP 0010.scaffold00043 297088 1 C A - ReadM SNP 0010.scaffold00043 297103 1 G A - ScafM SNP 0010.scaffold00043 298001 1 C T scaffold15632 ScafM SNP 0010.scaffold00043 298016 1 G T scaffold15632 ScafM SNP 0010.scaffold00043 298026 1 A T scaffold15632 ReadM SNP 0010.scaffold00043 300330 1 C T - ReadM SNP 0010.scaffold00043 300459 1 A G - Both SNP 0010.scaffold00043 301779 1 T C scaffold15632 Both SNP 0010.scaffold00043 302011 1 T C scaffold15632 ScafM INDEL 0010.scaffold00043 302023 1 . A scaffold15632 ScafM SNP 0010.scaffold00043 302044 1 T A scaffold15632 ReadM SNP 0010.scaffold00043 302220 1 A G - Both SNP 0010.scaffold00043 302330 1 C T scaffold15632 Both INDEL 0010.scaffold00043 303007 1 A . scaffold15632 Both SNP 0010.scaffold00043 303389 1 C T scaffold15632 Both SNP 0010.scaffold00043 303545 1 C G scaffold15632 Both SNP 0010.scaffold00043 303600 1 C T scaffold15632 Both SNP 0010.scaffold00043 303611 1 G T scaffold15632 Both SNP 0010.scaffold00043 303618 1 G A scaffold15632 Both INDEL 0010.scaffold00043 303722 1 C . scaffold15632 ScafM INDEL 0010.scaffold00043 303929 5 ..... TTTTT scaffold15632 ScafM SNP 0010.scaffold00043 303930 1 G T scaffold15632 Both SNP 0010.scaffold00043 304041 1 G C scaffold15632 Both SNP 0010.scaffold00043 304155 1 A G scaffold15632 Both SNP 0010.scaffold00043 304235 1 C T scaffold15632 Both SNP 0010.scaffold00043 304260 1 T G scaffold15632 Both SNP 0010.scaffold00043 304267 1 C T scaffold15632 Both INDEL 0010.scaffold00043 304310 1 . A scaffold15632 Both INDEL 0010.scaffold00043 304558 1 . A scaffold15632 Both SNP 0010.scaffold00043 304602 1 G A scaffold15632 ReadM INDEL 0010.scaffold00043 304721 2 .. CC - ReadM SNP 0010.scaffold00043 304813 1 G T - ReadM SNP 0010.scaffold00043 304840 1 G A - ReadM SNP 0010.scaffold00043 304880 1 G A - ReadM SNP 0010.scaffold00043 304898 1 T C - ReadM SNP 0010.scaffold00043 304913 1 G T - ReadM INDEL 0010.scaffold00043 305004 1 C . - ReadM SNP 0010.scaffold00043 305054 1 T C - ReadM SNP 0010.scaffold00043 305094 1 C T - ReadM SNP 0010.scaffold00043 305162 1 G A - ReadM INDEL 0010.scaffold00043 305212 1 G . - Both SNP 0010.scaffold00043 305297 1 C T scaffold15632 ReadM SNP 0010.scaffold00043 305588 1 C T - ReadM INDEL 0010.scaffold00043 305613 1 . C - ReadM INDEL 0010.scaffold00043 305615 1 . T - ReadM SNP 0010.scaffold00043 305855 1 C T - ReadM SNP 0010.scaffold00043 305950 1 G A - ReadM SNP 0010.scaffold00043 305970 1 A G - ReadM SNP 0010.scaffold00043 305976 1 G A - ReadM SNP 0010.scaffold00043 306269 1 T G - ReadM SNP 0010.scaffold00043 306488 1 T A - ReadM SNP 0010.scaffold00043 306505 1 T G - ReadM SNP 0010.scaffold00043 306556 1 G A - ReadM SNP 0010.scaffold00043 306590 1 A G - ReadM SNP 0010.scaffold00043 306649 1 T C - ReadM SNP 0010.scaffold00043 307160 1 G A - Both SNP 0010.scaffold00043 307452 1 A C scaffold10075 Both SNP 0010.scaffold00043 307510 1 A G scaffold10075 Both SNP 0010.scaffold00043 307516 1 C T scaffold10075 Both SNP 0010.scaffold00043 307587 1 T G scaffold10075 ReadM SNP 0010.scaffold00043 307830 1 G C - ReadM SNP 0010.scaffold00043 307851 1 T C - ReadM SNP 0010.scaffold00043 307921 1 T C - Both SNP 0010.scaffold00043 308037 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 308060 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 308069 1 C A scaffold10075 ScafM SNP 0010.scaffold00043 308084 1 G T scaffold10075 ScafM SNP 0010.scaffold00043 308109 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 308294 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 308327 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 308337 1 C T scaffold10075 ScafM INDEL 0010.scaffold00043 308357 2 .T CA scaffold10075 ScafM SNP 0010.scaffold00043 308373 1 G T scaffold10075 ScafM SNP 0010.scaffold00043 308384 1 C T scaffold10075 Both INDEL 0010.scaffold00043 308439 1 C . scaffold10075 Both SNP 0010.scaffold00043 308464 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 308583 1 G T scaffold10075 ScafM SNP 0010.scaffold00043 308592 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 308613 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 308622 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 308636 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 308647 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 308704 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 308708 1 C A scaffold10075 Both SNP 0010.scaffold00043 308796 1 G A scaffold10075 Both SNP 0010.scaffold00043 308803 1 G A scaffold10075 Both SNP 0010.scaffold00043 308828 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 308947 2 AC TA scaffold10075 ScafM INDEL 0010.scaffold00043 309007 1 . G scaffold10075 ScafM SNP 0010.scaffold00043 309087 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 309344 1 C T scaffold10075 ReadM SNP 0010.scaffold00043 311178 1 C T - ReadM INDEL 0010.scaffold00043 311529 2 .. TG - ReadM SNP 0010.scaffold00043 311782 1 A G - ReadM INDEL 0010.scaffold00043 311793 1 A . - ReadM INDEL 0010.scaffold00043 312102 1 T . - Both SNP 0010.scaffold00043 313569 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 314451 1 T A scaffold10075 Both SNP 0010.scaffold00043 315508 1 A G scaffold10075 Both INDEL 0010.scaffold00043 319087 1 T . scaffold10075 Both SNP 0010.scaffold00043 319186 1 A G scaffold10075 ReadM SNP 0010.scaffold00043 319400 1 T A - ReadM SNP 0010.scaffold00043 319436 1 A G - Both SNP 0010.scaffold00043 319605 1 G C scaffold10075 Both SNP 0010.scaffold00043 319657 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 319894 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 320400 1 T C scaffold10075 ScafM INDEL 0010.scaffold00043 320414 1 A . scaffold10075 ScafM SNP 0010.scaffold00043 320416 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 320426 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 320448 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 320455 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 320458 1 T G scaffold10075 ScafM SNP 0010.scaffold00043 320460 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 320480 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 320514 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 320562 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 320568 1 G T scaffold10075 ScafM INDEL 0010.scaffold00043 320573 7 ....... CTATAGC scaffold10075 ScafM INDEL 0010.scaffold00043 320577 3 ... TGG scaffold10075 ScafM INDEL 0010.scaffold00043 320578 1 . T scaffold10075 ScafM INDEL 0010.scaffold00043 320579 1 . T scaffold10075 ScafM INDEL 0010.scaffold00043 320581 3 ... AAA scaffold10075 ScafM SNP 0010.scaffold00043 320607 1 C G scaffold10075 ScafM INDEL 0010.scaffold00043 320611 7 TTTCCTT ....... scaffold10075 ScafM INDEL 0010.scaffold00043 320624 1 T . scaffold10075 ScafM INDEL 0010.scaffold00043 320626 1 T . scaffold10075 ScafM SNP 0010.scaffold00043 320628 1 C T scaffold10075 ScafM INDEL 0010.scaffold00043 320640 2 .A CG scaffold10075 ScafM SNP 0010.scaffold00043 320649 2 AG CT scaffold10075 ScafM INDEL 0010.scaffold00043 320706 2 TA .. scaffold10075 ScafM SNP 0010.scaffold00043 320721 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 320742 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 320957 1 G A scaffold10075 ScafM INDEL 0010.scaffold00043 320985 33 TATACCCACCAGAGATAAACAATTTTTAAAAAA ................................. scaffold10075 ScafM SNP 0010.scaffold00043 321065 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 321069 1 G T scaffold10075 ScafM SNP 0010.scaffold00043 321087 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 321167 1 G T scaffold10075 ScafM SNP 0010.scaffold00043 321170 1 C G scaffold10075 ScafM SNP 0010.scaffold00043 321204 1 A C scaffold10075 Both SNP 0010.scaffold00043 321244 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 321288 1 T C scaffold10075 Both SNP 0010.scaffold00043 321338 1 G A scaffold10075 Both SNP 0010.scaffold00043 321357 1 C G scaffold10075 ScafM SNP 0010.scaffold00043 321394 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 321994 1 C T scaffold10075 ScafM INDEL 0010.scaffold00043 322016 1 . T scaffold10075 ScafM SNP 0010.scaffold00043 322030 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 322044 2 CA TC scaffold10075 ScafM SNP 0010.scaffold00043 322062 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322100 1 C A scaffold10075 ScafM SNP 0010.scaffold00043 322125 1 C A scaffold10075 Both SNP 0010.scaffold00043 322141 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322338 1 G C scaffold10075 ScafM SNP 0010.scaffold00043 322418 2 TC AA scaffold10075 ScafM SNP 0010.scaffold00043 322422 1 C T scaffold10075 ScafM INDEL 0010.scaffold00043 322447 15 ............... ACTAAAGATAGTAAT scaffold10075 ScafM SNP 0010.scaffold00043 322456 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 322472 1 G C scaffold10075 ScafM SNP 0010.scaffold00043 322485 1 A C scaffold10075 ScafM INDEL 0010.scaffold00043 322503 1 C . scaffold10075 ScafM SNP 0010.scaffold00043 322530 2 TA CT scaffold10075 ScafM SNP 0010.scaffold00043 322544 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 322551 1 C A scaffold10075 ScafM SNP 0010.scaffold00043 322569 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322579 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322581 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 322583 1 G C scaffold10075 ScafM SNP 0010.scaffold00043 322599 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 322610 1 C A scaffold10075 ScafM INDEL 0010.scaffold00043 322612 2 .C AA scaffold10075 ScafM INDEL 0010.scaffold00043 322618 1 . T scaffold10075 ScafM SNP 0010.scaffold00043 322678 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322711 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 322714 1 A C scaffold10075 ScafM SNP 0010.scaffold00043 322719 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 322767 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 322773 1 T G scaffold10075 ScafM INDEL 0010.scaffold00043 322778 1 G . scaffold10075 ScafM INDEL 0010.scaffold00043 322780 4 TTCG .... scaffold10075 ScafM SNP 0010.scaffold00043 322810 1 A T scaffold10075 ScafM INDEL 0010.scaffold00043 322818 4 .... AATT scaffold10075 ScafM SNP 0010.scaffold00043 322825 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322844 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 322859 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 322861 1 C A scaffold10075 ScafM SNP 0010.scaffold00043 322863 1 T A scaffold10075 ScafM INDEL 0010.scaffold00043 322888 1 A . scaffold10075 ScafM SNP 0010.scaffold00043 322919 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 323027 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 323299 2 CC AA scaffold10075 ScafM SNP 0010.scaffold00043 323330 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 323359 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 323365 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 323552 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 323567 1 A G scaffold10075 ScafM INDEL 0010.scaffold00043 323660 8 ........ ATGAAGCA scaffold10075 ScafM SNP 0010.scaffold00043 323665 1 T G scaffold10075 ScafM SNP 0010.scaffold00043 323684 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 323738 1 C T scaffold10075 Both SNP 0010.scaffold00043 323766 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 323920 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 324356 1 T G scaffold10075 ScafM INDEL 0010.scaffold00043 325598 5 ATGAC ..... scaffold10075 ScafM SNP 0010.scaffold00043 325637 1 T C scaffold10075 ScafM INDEL 0010.scaffold00043 325650 3 AAT ... scaffold10075 ScafM SNP 0010.scaffold00043 325724 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 325726 1 C A scaffold10075 ScafM SNP 0010.scaffold00043 325735 1 G A scaffold10075 ScafM SNP 0010.scaffold00043 325737 1 A G scaffold10075 ScafM SNP 0010.scaffold00043 325773 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 325827 1 A T scaffold10075 ScafM INDEL 0010.scaffold00043 325831 2 TG .. scaffold10075 ScafM SNP 0010.scaffold00043 325849 1 T A scaffold10075 ScafM SNP 0010.scaffold00043 325864 1 A T scaffold10075 ScafM SNP 0010.scaffold00043 325979 1 C G scaffold10075 ScafM INDEL 0010.scaffold00043 326027 4 .... ATAT scaffold10075 ScafM INDEL 0010.scaffold00043 326634 5 ..... AACTA scaffold10075 ScafM INDEL 0010.scaffold00043 326636 1 . T scaffold10075 ScafM SNP 0010.scaffold00043 326638 1 C T scaffold10075 ScafM SNP 0010.scaffold00043 326640 1 T G scaffold10075 ScafM SNP 0010.scaffold00043 326642 2 CC TA scaffold10075 ScafM INDEL 0010.scaffold00043 326646 4 .... GACA scaffold10075 ScafM INDEL 0010.scaffold00043 326701 8 ........ TGATACAG scaffold10075 ScafM SNP 0010.scaffold00043 326835 1 T C scaffold10075 ScafM SNP 0010.scaffold00043 326837 1 T C scaffold10075 ScafM INDEL 0010.scaffold00043 327230 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 327287 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 327296 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 327429 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 327433 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 327469 2 .. TT scaffold1019 ScafM INDEL 0010.scaffold00043 327550 2 .. CC scaffold1019 ScafM SNP 0010.scaffold00043 327552 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 327559 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 327562 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 327568 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 327600 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 328230 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 328353 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 328414 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 328599 3 ... GGA scaffold1019 ScafM SNP 0010.scaffold00043 328620 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 328709 8 ........ ATAATAAC scaffold1019 ScafM INDEL 0010.scaffold00043 328780 1 T . scaffold1019 Both SNP 0010.scaffold00043 329024 1 A C scaffold1019 Both SNP 0010.scaffold00043 329069 1 T C scaffold1019 Both INDEL 0010.scaffold00043 329220 3 ... GAT scaffold1019 ScafM INDEL 0010.scaffold00043 329346 5 ..... TAATC scaffold1019 ScafM INDEL 0010.scaffold00043 329372 1 T . scaffold1019 ScafM INDEL 0010.scaffold00043 329385 2 AA .. scaffold1019 ScafM SNP 0010.scaffold00043 329394 3 TTG AAT scaffold1019 ScafM SNP 0010.scaffold00043 329410 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 329591 1 . G scaffold1019 ScafM SNP 0010.scaffold00043 329596 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 329603 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 329639 2 GG AA scaffold1019 ScafM INDEL 0010.scaffold00043 330838 1 . C scaffold1019 ScafM INDEL 0010.scaffold00043 330872 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 330950 1 . G scaffold1019 ScafM SNP 0010.scaffold00043 331165 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 331183 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 331236 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 331272 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 331329 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 331407 4 GCGT .... scaffold1019 ScafM SNP 0010.scaffold00043 331550 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 331554 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 331589 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 331595 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 331627 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 331646 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 331656 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 331735 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 332207 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 332220 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 332223 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 332244 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 332275 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 332300 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 332304 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 332343 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 332394 2 .. AT scaffold1019 ScafM SNP 0010.scaffold00043 332430 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 332448 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 332450 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 332490 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 332502 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 332505 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 332509 1 . A scaffold1019 ReadM SNP 0010.scaffold00043 332925 1 A G - ScafM SNP 0010.scaffold00043 333099 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 333153 1 T G scaffold1019 Both SNP 0010.scaffold00043 333320 1 A G scaffold1019 ReadM SNP 0010.scaffold00043 333517 1 C A - ReadM SNP 0010.scaffold00043 333529 1 A G - ReadM INDEL 0010.scaffold00043 333611 1 G . - ScafM SNP 0010.scaffold00043 333611 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 333947 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 333953 1 . T scaffold1019 ScafM INDEL 0010.scaffold00043 333979 1 T . scaffold1019 Both SNP 0010.scaffold00043 334068 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 334437 2 .. AA scaffold1019 ScafM SNP 0010.scaffold00043 334469 2 AG CA scaffold1019 ScafM SNP 0010.scaffold00043 334487 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 334493 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 334518 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 334529 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 334546 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 334557 2 TT AA scaffold1019 ScafM SNP 0010.scaffold00043 334561 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 334579 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 334584 2 CG AA scaffold1019 ScafM INDEL 0010.scaffold00043 334593 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 334608 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 334622 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 334627 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 334632 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 334637 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 334647 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 334655 9 ......... CACAATCGC scaffold1019 ScafM SNP 0010.scaffold00043 334668 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 334671 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 334680 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 334685 2 AT .. scaffold1019 ScafM INDEL 0010.scaffold00043 334718 2 CT .. scaffold1019 ScafM INDEL 0010.scaffold00043 334738 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 334751 1 C A scaffold1019 ScafM INDEL 0010.scaffold00043 334792 1 C . scaffold1019 ScafM SNP 0010.scaffold00043 334795 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 334806 3 ... TAA scaffold1019 ScafM SNP 0010.scaffold00043 334809 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 334841 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 334845 8 ........ TTTTTACT scaffold1019 Both SNP 0010.scaffold00043 334871 1 C T scaffold1019 Both SNP 0010.scaffold00043 334888 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 334964 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 335012 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 335016 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 335021 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 335047 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 335061 3 .TT AAA scaffold1019 ScafM SNP 0010.scaffold00043 335068 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 335071 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 335081 1 . A scaffold1019 ScafM SNP 0010.scaffold00043 335084 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 335101 2 AA .. scaffold1019 ScafM INDEL 0010.scaffold00043 335106 3 AAA ... scaffold1019 ScafM SNP 0010.scaffold00043 335138 1 C G scaffold1019 ScafM SNP 0010.scaffold00043 335158 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 335188 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 335197 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 335224 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 335250 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 335255 7 TTAGCTT ....... scaffold1019 ScafM SNP 0010.scaffold00043 335269 2 TT CC scaffold1019 ScafM SNP 0010.scaffold00043 335273 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 335287 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 335302 2 .. GA scaffold1019 ScafM INDEL 0010.scaffold00043 335303 2 .. CC scaffold1019 ScafM INDEL 0010.scaffold00043 335304 1 . A scaffold1019 ScafM SNP 0010.scaffold00043 335309 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 335311 2 TT CG scaffold1019 ScafM INDEL 0010.scaffold00043 335315 6 TTTTTT ...... scaffold1019 ScafM INDEL 0010.scaffold00043 335322 1 C . scaffold1019 ScafM SNP 0010.scaffold00043 335333 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 335340 14 CGTTTTAGATTTGT .............. scaffold1019 ScafM SNP 0010.scaffold00043 335366 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 335382 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 335388 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 335393 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 335405 1 . G scaffold1019 ScafM SNP 0010.scaffold00043 335411 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 335414 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 335418 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 335420 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 335427 2 GA AG scaffold1019 ScafM SNP 0010.scaffold00043 335437 2 CG AA scaffold1019 ScafM SNP 0010.scaffold00043 335450 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 335453 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 335459 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 335466 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 335487 1 . G scaffold1019 ScafM INDEL 0010.scaffold00043 335491 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 335495 3 AAC TGT scaffold1019 ScafM INDEL 0010.scaffold00043 335501 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 335503 1 C G scaffold1019 ScafM SNP 0010.scaffold00043 335507 2 TC GA scaffold1019 ScafM INDEL 0010.scaffold00043 335511 2 GT .. scaffold1019 ScafM INDEL 0010.scaffold00043 335698 1 G . scaffold1019 ScafM SNP 0010.scaffold00043 335700 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 335702 4 CAAC ...G scaffold1019 ScafM SNP 0010.scaffold00043 335835 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 335842 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 335844 5 ..... AAACA scaffold1019 ScafM SNP 0010.scaffold00043 335906 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 335934 10 .......... AGCTTAGCTT scaffold1019 ScafM SNP 0010.scaffold00043 335949 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 335981 8 ........ GCTTGTTT scaffold1019 ScafM INDEL 0010.scaffold00043 336038 5 ..... TGATA scaffold1019 Both SNP 0010.scaffold00043 336102 1 C T scaffold1019 Both SNP 0010.scaffold00043 336131 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 336264 3 ... TTT scaffold1019 ScafM INDEL 0010.scaffold00043 336318 4 .... AAAA scaffold1019 ScafM SNP 0010.scaffold00043 336327 1 G A scaffold1019 Both SNP 0010.scaffold00043 336423 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 336639 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 336641 1 T C scaffold1019 Both SNP 0010.scaffold00043 336747 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 336771 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 337255 3 TAC ... scaffold1019 Both SNP 0010.scaffold00043 337301 1 T A scaffold1019 Both INDEL 0010.scaffold00043 337386 1 T . scaffold1019 Both SNP 0010.scaffold00043 337399 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 337415 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 337440 1 C G scaffold1019 Both SNP 0010.scaffold00043 337546 1 C A scaffold1019 Both SNP 0010.scaffold00043 337597 1 C A scaffold1019 Both SNP 0010.scaffold00043 337639 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 337653 2 CA AT scaffold1019 ScafM SNP 0010.scaffold00043 337778 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 337781 1 C A scaffold1019 ScafM INDEL 0010.scaffold00043 337786 1 A . scaffold1019 ScafM SNP 0010.scaffold00043 337809 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 337813 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 337825 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 337838 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 337863 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 337866 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 337870 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 337872 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 337875 1 . T scaffold1019 ReadM SNP 0010.scaffold00043 338037 1 C T - Both SNP 0010.scaffold00043 338059 1 C T scaffold1019 Both SNP 0010.scaffold00043 338065 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 341340 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 341352 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 341364 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 341371 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 341373 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 341392 1 T G scaffold1019 Both SNP 0010.scaffold00043 341539 1 A G scaffold1019 Both SNP 0010.scaffold00043 341610 1 A C scaffold1019 Both SNP 0010.scaffold00043 341686 1 T C scaffold1019 Both SNP 0010.scaffold00043 341730 1 A G scaffold1019 Both SNP 0010.scaffold00043 341758 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 341831 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 341897 4 .... TTAA scaffold1019 ScafM SNP 0010.scaffold00043 341953 1 C G scaffold1019 ScafM SNP 0010.scaffold00043 341960 1 T G scaffold1019 Both SNP 0010.scaffold00043 342004 1 G T scaffold1019 Both SNP 0010.scaffold00043 342017 1 T G scaffold1019 ReadM SNP 0010.scaffold00043 342593 1 G A - ReadM SNP 0010.scaffold00043 342600 1 A G - ReadM SNP 0010.scaffold00043 342685 1 T A - ReadM SNP 0010.scaffold00043 343538 1 T C - ReadM SNP 0010.scaffold00043 343825 1 G A - ScafM INDEL 0010.scaffold00043 344160 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 344167 1 . G scaffold1019 ScafM SNP 0010.scaffold00043 344186 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 344217 2 CG AC scaffold1019 ScafM SNP 0010.scaffold00043 344229 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 344255 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 344262 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 344277 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 344282 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 344285 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 344292 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 344313 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 344329 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 344354 1 A G scaffold1019 Both SNP 0010.scaffold00043 344457 1 A G scaffold1019 Both SNP 0010.scaffold00043 344573 1 C A scaffold1019 Both SNP 0010.scaffold00043 344632 1 T A scaffold1019 Both SNP 0010.scaffold00043 344907 1 G C scaffold1019 Both SNP 0010.scaffold00043 344913 1 T C scaffold1019 Both SNP 0010.scaffold00043 344938 1 T C scaffold1019 Both SNP 0010.scaffold00043 344945 1 G A scaffold1019 Both SNP 0010.scaffold00043 345046 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 345092 1 T C scaffold1019 Both SNP 0010.scaffold00043 345113 1 T C scaffold1019 Both SNP 0010.scaffold00043 345178 1 T C scaffold1019 Both SNP 0010.scaffold00043 345202 1 A T scaffold1019 Both SNP 0010.scaffold00043 345470 1 A G scaffold1019 Both SNP 0010.scaffold00043 345527 1 G A scaffold1019 Both SNP 0010.scaffold00043 345536 1 G A scaffold1019 Both SNP 0010.scaffold00043 345566 1 C T scaffold1019 Both SNP 0010.scaffold00043 345569 1 G A scaffold1019 Both SNP 0010.scaffold00043 345662 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 346088 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 346091 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 346196 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 346205 1 . G scaffold1019 ScafM INDEL 0010.scaffold00043 346284 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 346289 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 346351 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 346355 2 .A CT scaffold1019 ScafM SNP 0010.scaffold00043 346358 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 346368 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 346562 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 346563 1 . G scaffold1019 ScafM INDEL 0010.scaffold00043 346586 1 G . scaffold1019 ScafM INDEL 0010.scaffold00043 346613 8 ........ TACTTGTA scaffold1019 ScafM INDEL 0010.scaffold00043 346616 1 . C scaffold1019 ScafM SNP 0010.scaffold00043 346635 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 346637 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 346660 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 346666 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 346673 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 346679 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 346684 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 346696 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 346710 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 346726 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 346731 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 346735 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 346737 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 346756 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 346762 2 AC CT scaffold1019 ScafM SNP 0010.scaffold00043 346779 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 346794 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 346797 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 347476 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 347573 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 347897 1 . A scaffold1019 ScafM SNP 0010.scaffold00043 347932 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 347937 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 347948 1 G C scaffold1019 ScafM INDEL 0010.scaffold00043 347981 2 .. AA scaffold1019 ScafM SNP 0010.scaffold00043 347983 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 348018 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 348021 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 348033 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 348047 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 348062 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 348070 1 G C scaffold1019 ScafM INDEL 0010.scaffold00043 348081 2 TT .G scaffold1019 ScafM SNP 0010.scaffold00043 348085 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 348089 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 348104 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 348117 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 348141 5 ATTAA ..... scaffold1019 ScafM SNP 0010.scaffold00043 348187 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 348190 1 T G scaffold1019 ScafM INDEL 0010.scaffold00043 348192 2 TG .. scaffold1019 ScafM INDEL 0010.scaffold00043 348196 3 TTT ... scaffold1019 ScafM SNP 0010.scaffold00043 348200 1 C A scaffold1019 ScafM INDEL 0010.scaffold00043 348204 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 348245 4 TATC .... scaffold1019 ScafM SNP 0010.scaffold00043 348253 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 348267 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 348301 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 348333 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 348336 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 349015 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 349089 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 349126 3 TAT ... scaffold1019 ScafM SNP 0010.scaffold00043 349136 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 349149 2 GC .. scaffold1019 ScafM SNP 0010.scaffold00043 349152 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 349278 1 A T scaffold1019 Both INDEL 0010.scaffold00043 349283 1 . A scaffold1019 Both SNP 0010.scaffold00043 349289 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 349585 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 349597 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 349598 2 .. TA scaffold1019 ScafM INDEL 0010.scaffold00043 349635 3 ... ATT scaffold1019 ScafM INDEL 0010.scaffold00043 349639 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 349701 7 ....... AGCCCAT scaffold1019 ScafM SNP 0010.scaffold00043 349713 1 C G scaffold1019 ScafM INDEL 0010.scaffold00043 350106 1 . T scaffold1019 ScafM INDEL 0010.scaffold00043 350112 2 GG .. scaffold1019 ScafM SNP 0010.scaffold00043 350147 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 350168 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 350193 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 350199 2 TA GT scaffold1019 ScafM SNP 0010.scaffold00043 350226 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 350238 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 350268 2 AG GA scaffold1019 Both SNP 0010.scaffold00043 350617 1 C T scaffold1019 Both SNP 0010.scaffold00043 350657 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 354545 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 356922 1 . A scaffold1019 ScafM INDEL 0010.scaffold00043 360127 1 . T scaffold1019 ScafM INDEL 0010.scaffold00043 363122 1 . T scaffold1019 ScafM INDEL 0010.scaffold00043 367699 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 367817 1 G . scaffold1019 ScafM INDEL 0010.scaffold00043 367879 2 CG .. scaffold1019 ScafM SNP 0010.scaffold00043 367885 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 367887 1 C A scaffold1019 ScafM INDEL 0010.scaffold00043 367890 2 TC .. scaffold1019 ScafM INDEL 0010.scaffold00043 367893 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 367896 1 C A scaffold1019 ScafM INDEL 0010.scaffold00043 367898 2 TT .. scaffold1019 ScafM INDEL 0010.scaffold00043 367902 1 T . scaffold1019 ScafM INDEL 0010.scaffold00043 367907 1 G . scaffold1019 ScafM SNP 0010.scaffold00043 367910 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 367912 1 T A scaffold1019 ScafM INDEL 0010.scaffold00043 367914 4 .TTT AAAA scaffold1019 ScafM INDEL 0010.scaffold00043 367922 1 C . scaffold1019 ScafM SNP 0010.scaffold00043 368022 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 369036 1 A T scaffold1019 Both SNP 0010.scaffold00043 369294 1 A G scaffold1019 Both SNP 0010.scaffold00043 369530 1 A G scaffold1019 Both SNP 0010.scaffold00043 369715 1 A C scaffold1019 Both SNP 0010.scaffold00043 369741 1 T C scaffold1019 Both SNP 0010.scaffold00043 370025 1 C T scaffold1019 Both SNP 0010.scaffold00043 370036 1 C T scaffold1019 Both SNP 0010.scaffold00043 370062 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 370112 30 .............................. CAACAACAACAACAACATAGGGAACAACAA scaffold1019 ScafM SNP 0010.scaffold00043 370164 2 GG AT scaffold1019 Both SNP 0010.scaffold00043 370195 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 370236 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 370240 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 370278 2 TT AC scaffold1019 ScafM SNP 0010.scaffold00043 370285 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 370313 1 G A scaffold1019 Both SNP 0010.scaffold00043 370363 1 T C scaffold1019 Both SNP 0010.scaffold00043 370419 1 T A scaffold1019 Both SNP 0010.scaffold00043 370469 1 G A scaffold1019 Both SNP 0010.scaffold00043 370694 1 C T scaffold1019 Both INDEL 0010.scaffold00043 370725 1 A . scaffold1019 ReadM INDEL 0010.scaffold00043 370864 1 . A - ScafM INDEL 0010.scaffold00043 370864 2 .G AA scaffold1019 ScafM INDEL 0010.scaffold00043 370938 1 . T scaffold1019 ReadM SNP 0010.scaffold00043 371190 1 A G - ReadM INDEL 0010.scaffold00043 371337 1 . G - ReadM SNP 0010.scaffold00043 371413 1 T A - ReadM SNP 0010.scaffold00043 371658 1 G A - ScafM INDEL 0010.scaffold00043 372242 3 ... AAA scaffold1019 ScafM SNP 0010.scaffold00043 372564 1 C T scaffold1019 Both SNP 0010.scaffold00043 373248 1 C T scaffold1019 Both SNP 0010.scaffold00043 373279 1 T C scaffold1019 Both SNP 0010.scaffold00043 373284 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 373331 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 373342 1 . A scaffold1019 Both SNP 0010.scaffold00043 373378 1 C T scaffold1019 Both INDEL 0010.scaffold00043 373398 1 T . scaffold1019 Both SNP 0010.scaffold00043 373423 1 G T scaffold1019 Both SNP 0010.scaffold00043 373498 1 A C scaffold1019 Both SNP 0010.scaffold00043 373567 1 A G scaffold1019 Both INDEL 0010.scaffold00043 373592 1 . C scaffold1019 Both SNP 0010.scaffold00043 373637 1 G C scaffold1019 Both SNP 0010.scaffold00043 373646 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 373699 11 AAGCTAATATC ........... scaffold1019 ScafM INDEL 0010.scaffold00043 373712 1 C . scaffold1019 Both SNP 0010.scaffold00043 373808 1 C G scaffold1019 Both SNP 0010.scaffold00043 373811 1 A C scaffold1019 Both SNP 0010.scaffold00043 373833 1 A G scaffold1019 Both INDEL 0010.scaffold00043 374013 3 ... GAG scaffold1019 Both SNP 0010.scaffold00043 374231 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 374258 2 CT GC scaffold1019 ScafM SNP 0010.scaffold00043 374282 1 C A scaffold1019 ReadM SNP 0010.scaffold00043 374298 1 A G - ReadM SNP 0010.scaffold00043 374397 1 C T - ReadM SNP 0010.scaffold00043 374454 1 C A - ReadM SNP 0010.scaffold00043 374522 1 A C - ScafM INDEL 0010.scaffold00043 375316 1 T . scaffold1019 Both SNP 0010.scaffold00043 375368 1 G A scaffold1019 Both SNP 0010.scaffold00043 375436 1 A G scaffold1019 Both SNP 0010.scaffold00043 375502 1 A G scaffold1019 Both SNP 0010.scaffold00043 375517 1 G A scaffold1019 Both SNP 0010.scaffold00043 375538 1 T C scaffold1019 Both SNP 0010.scaffold00043 375592 1 G A scaffold1019 Both SNP 0010.scaffold00043 375799 1 T A scaffold1019 Both SNP 0010.scaffold00043 376415 1 A C scaffold1019 Both SNP 0010.scaffold00043 376482 1 G A scaffold1019 Both SNP 0010.scaffold00043 376512 1 A G scaffold1019 Both SNP 0010.scaffold00043 376571 1 T G scaffold1019 ScafM INDEL 0010.scaffold00043 376644 4 .... ACAG scaffold1019 ScafM SNP 0010.scaffold00043 376713 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 376727 11 AACATTTACAC ........... scaffold1019 ScafM SNP 0010.scaffold00043 376988 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 376995 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 377000 2 .. AT scaffold1019 ScafM SNP 0010.scaffold00043 377070 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 377075 4 ACAC .... scaffold1019 ScafM SNP 0010.scaffold00043 377080 3 TCA GTG scaffold1019 ReadM INDEL 0010.scaffold00043 377164 1 . T - ReadM SNP 0010.scaffold00043 377624 1 G A - ScafM SNP 0010.scaffold00043 378208 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 378236 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 378244 2 AT GC scaffold1019 ScafM SNP 0010.scaffold00043 378252 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 378268 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 378277 2 .. AA scaffold1019 ScafM SNP 0010.scaffold00043 378300 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 378306 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 378357 1 T G scaffold1019 ScafM INDEL 0010.scaffold00043 378554 1 C . scaffold1019 ScafM INDEL 0010.scaffold00043 378557 10 ACCCCCCCCC .......... scaffold1019 ScafM INDEL 0010.scaffold00043 378585 3 AAC ... scaffold1019 ScafM INDEL 0010.scaffold00043 378593 1 C . scaffold1019 ScafM SNP 0010.scaffold00043 378693 1 C G scaffold1019 ScafM SNP 0010.scaffold00043 378810 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 378814 1 C T scaffold1019 Both SNP 0010.scaffold00043 379037 1 C T scaffold1019 Both INDEL 0010.scaffold00043 379072 1 A . scaffold1019 Both SNP 0010.scaffold00043 379116 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 379139 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 379409 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 379423 4 .... GGGG scaffold1019 ScafM SNP 0010.scaffold00043 379436 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 379878 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 379887 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 379946 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 379951 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 380089 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 380122 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 380569 4 ATCG .... scaffold1019 ScafM SNP 0010.scaffold00043 380591 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 380598 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 380606 1 C T scaffold1019 Both SNP 0010.scaffold00043 380685 1 A G scaffold1019 Both SNP 0010.scaffold00043 380759 1 A G scaffold1019 ReadM INDEL 0010.scaffold00043 380808 1 . C - ReadM SNP 0010.scaffold00043 380898 1 C T - ReadM SNP 0010.scaffold00043 380919 1 T A - ReadM SNP 0010.scaffold00043 381031 1 C T - ScafM SNP 0010.scaffold00043 381114 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 381920 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 381923 1 G . scaffold1019 ScafM INDEL 0010.scaffold00043 381926 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 381962 7 ....... ACTTGTG scaffold1019 ScafM SNP 0010.scaffold00043 381991 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 382003 8 ATATTAGT ........ scaffold1019 ScafM INDEL 0010.scaffold00043 382041 2 AA .. scaffold1019 Both SNP 0010.scaffold00043 382410 1 A G scaffold1019 Both SNP 0010.scaffold00043 382567 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 382577 2 AT GC scaffold1019 Both SNP 0010.scaffold00043 382700 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 382733 15 ............... TCGGTTTGACATTAT scaffold1019 ScafM SNP 0010.scaffold00043 382766 1 C G scaffold1019 ScafM SNP 0010.scaffold00043 382791 1 T A scaffold1019 Both SNP 0010.scaffold00043 382817 1 G T scaffold1019 Both SNP 0010.scaffold00043 382833 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 382891 1 T C scaffold1019 Both SNP 0010.scaffold00043 383022 1 G A scaffold1019 Both SNP 0010.scaffold00043 383093 1 C G scaffold1019 Both INDEL 0010.scaffold00043 383098 2 AT .. scaffold1019 ScafM SNP 0010.scaffold00043 383181 2 TT GC scaffold1019 Both SNP 0010.scaffold00043 383316 1 T C scaffold1019 Both SNP 0010.scaffold00043 383328 1 C A scaffold1019 Both SNP 0010.scaffold00043 383348 1 G T scaffold1019 Both SNP 0010.scaffold00043 383358 1 G T scaffold1019 Both SNP 0010.scaffold00043 383511 1 A G scaffold1019 Both SNP 0010.scaffold00043 383526 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 383639 7 ....... TGAGTAG scaffold1019 ScafM SNP 0010.scaffold00043 383651 2 TG CA scaffold1019 Both SNP 0010.scaffold00043 383699 1 G A scaffold1019 Both SNP 0010.scaffold00043 383719 1 A G scaffold1019 Both SNP 0010.scaffold00043 384035 1 A G scaffold1019 Both SNP 0010.scaffold00043 384079 1 C T scaffold1019 Both SNP 0010.scaffold00043 384109 1 A T scaffold1019 ScafM INDEL 0010.scaffold00043 384160 4 .... AGTT scaffold1019 Both SNP 0010.scaffold00043 384199 1 A G scaffold1019 Both SNP 0010.scaffold00043 384229 1 C A scaffold1019 ReadM SNP 0010.scaffold00043 384309 1 A G - ReadM SNP 0010.scaffold00043 384343 1 C T - ScafM INDEL 0010.scaffold00043 384573 5 CTTTT ..... scaffold1019 ScafM SNP 0010.scaffold00043 384595 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 384634 7 GGGGGGG ....... scaffold1019 Both SNP 0010.scaffold00043 384680 1 A T scaffold1019 Both SNP 0010.scaffold00043 384738 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 384789 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 384791 1 A G scaffold1019 Both SNP 0010.scaffold00043 384907 1 A G scaffold1019 Both INDEL 0010.scaffold00043 385247 2 .. CA scaffold1019 Both SNP 0010.scaffold00043 385391 1 T C scaffold1019 Both SNP 0010.scaffold00043 385396 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 385405 1 A G scaffold1019 Both SNP 0010.scaffold00043 385452 1 T C scaffold1019 Both SNP 0010.scaffold00043 385479 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 385550 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 385568 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 385581 1 A . scaffold1019 ScafM SNP 0010.scaffold00043 385604 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 385641 2 CC TG scaffold1019 ReadM SNP 0010.scaffold00043 385642 1 C G - Both SNP 0010.scaffold00043 385691 1 T C scaffold1019 Both SNP 0010.scaffold00043 385786 1 G A scaffold1019 Both SNP 0010.scaffold00043 385908 1 G A scaffold1019 Both SNP 0010.scaffold00043 386010 1 T C scaffold1019 Both SNP 0010.scaffold00043 386104 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 386123 2 GA TG scaffold1019 ScafM SNP 0010.scaffold00043 386130 1 A T scaffold1019 Both INDEL 0010.scaffold00043 386559 3 CTG ... scaffold1019 Both SNP 0010.scaffold00043 386726 1 T A scaffold1019 Both SNP 0010.scaffold00043 386731 1 G T scaffold1019 Both SNP 0010.scaffold00043 386820 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 386853 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 386868 4 GGGT .... scaffold1019 ScafM INDEL 0010.scaffold00043 386879 16 TACTGCTTATAAGCTC ................ scaffold1019 Both SNP 0010.scaffold00043 387017 1 A T scaffold1019 Both INDEL 0010.scaffold00043 387145 1 T . scaffold1019 Both SNP 0010.scaffold00043 387217 1 A G scaffold1019 ReadM SNP 0010.scaffold00043 387538 1 A G - ReadM SNP 0010.scaffold00043 387643 1 C T - ReadM SNP 0010.scaffold00043 387648 1 A G - Both SNP 0010.scaffold00043 387783 1 G A scaffold1019 Both SNP 0010.scaffold00043 387829 1 T C scaffold1019 Both INDEL 0010.scaffold00043 387929 1 . T scaffold1019 Both SNP 0010.scaffold00043 388009 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 388058 1 G T scaffold1019 ScafM INDEL 0010.scaffold00043 388060 2 .. CC scaffold1019 ScafM SNP 0010.scaffold00043 388075 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 388081 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 388159 2 CG AA scaffold1019 ScafM SNP 0010.scaffold00043 388170 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 388180 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 388214 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 388230 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 388276 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 388310 2 TG AA scaffold1019 ScafM SNP 0010.scaffold00043 388321 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 388368 1 A T scaffold1019 Both SNP 0010.scaffold00043 388501 1 A C scaffold1019 ScafM INDEL 0010.scaffold00043 388563 13 ............. GTAATGGTACTAA scaffold1019 ScafM SNP 0010.scaffold00043 388598 1 A T scaffold1019 ReadM SNP 0010.scaffold00043 388642 1 C G - Both SNP 0010.scaffold00043 388763 1 T C scaffold1019 Both SNP 0010.scaffold00043 388782 1 C T scaffold1019 Both SNP 0010.scaffold00043 388797 1 T G scaffold1019 Both SNP 0010.scaffold00043 388847 1 G A scaffold1019 Both SNP 0010.scaffold00043 388993 1 T C scaffold1019 Both SNP 0010.scaffold00043 389001 1 G A scaffold1019 Both SNP 0010.scaffold00043 389010 1 G A scaffold1019 Both SNP 0010.scaffold00043 389058 1 A G scaffold1019 Both SNP 0010.scaffold00043 389105 1 A G scaffold1019 Both SNP 0010.scaffold00043 389269 1 C T scaffold1019 Both SNP 0010.scaffold00043 389466 1 T A scaffold1019 Both SNP 0010.scaffold00043 389481 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 389610 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 389699 1 G A scaffold1019 ScafM INDEL 0010.scaffold00043 389704 1 A . scaffold1019 ScafM SNP 0010.scaffold00043 389783 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 389816 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 389827 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 389857 1 A . scaffold1019 ScafM SNP 0010.scaffold00043 390009 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 390010 2 .. AG scaffold1019 ScafM SNP 0010.scaffold00043 390043 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 390069 4 .... ATAA scaffold1019 ScafM SNP 0010.scaffold00043 390078 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 390239 1 G C scaffold1019 ScafM INDEL 0010.scaffold00043 390265 1 T . scaffold1019 ScafM SNP 0010.scaffold00043 390425 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 390465 2 CT AG scaffold1019 ScafM SNP 0010.scaffold00043 390478 2 TT AC scaffold1019 ScafM INDEL 0010.scaffold00043 390494 3 TAC ... scaffold1019 ScafM SNP 0010.scaffold00043 390505 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 390627 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 390631 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 390636 3 ... AAA scaffold1019 ScafM SNP 0010.scaffold00043 390650 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 390677 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 390689 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 390699 1 A T scaffold1019 Both SNP 0010.scaffold00043 390979 1 T C scaffold1019 Both SNP 0010.scaffold00043 391351 1 C A scaffold1019 Both SNP 0010.scaffold00043 391396 1 T G scaffold1019 Both SNP 0010.scaffold00043 391600 1 A G scaffold1019 Both SNP 0010.scaffold00043 391738 1 C G scaffold1019 Both SNP 0010.scaffold00043 391862 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 391892 2 AG GA scaffold1019 ReadM SNP 0010.scaffold00043 391964 1 T C - ReadM SNP 0010.scaffold00043 392341 1 T C - ReadM SNP 0010.scaffold00043 392454 1 A G - ReadM SNP 0010.scaffold00043 392637 1 G A - ReadM SNP 0010.scaffold00043 392641 1 G A - ReadM SNP 0010.scaffold00043 393231 1 C T - ScafM SNP 0010.scaffold00043 393491 1 T G scaffold1019 Both SNP 0010.scaffold00043 393541 1 T A scaffold1019 ReadM SNP 0010.scaffold00043 393688 1 A G - ReadM SNP 0010.scaffold00043 393691 1 A G - ReadM SNP 0010.scaffold00043 393787 1 G A - ReadM SNP 0010.scaffold00043 394055 1 A G - ReadM SNP 0010.scaffold00043 394212 1 T G - ReadM SNP 0010.scaffold00043 394288 1 C T - ReadM SNP 0010.scaffold00043 394313 1 A T - Both SNP 0010.scaffold00043 394523 1 A G scaffold1019 Both SNP 0010.scaffold00043 394618 1 C G scaffold1019 Both SNP 0010.scaffold00043 394662 1 T C scaffold1019 Both SNP 0010.scaffold00043 394808 1 T A scaffold1019 Both SNP 0010.scaffold00043 394858 1 T C scaffold1019 Both SNP 0010.scaffold00043 394888 1 C T scaffold1019 Both SNP 0010.scaffold00043 394989 1 A T scaffold1019 Both SNP 0010.scaffold00043 395065 1 C A scaffold1019 Both SNP 0010.scaffold00043 395068 1 G T scaffold1019 ReadM SNP 0010.scaffold00043 395196 1 A G - Both SNP 0010.scaffold00043 395367 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 395399 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 395406 1 T A scaffold1019 ScafM SNP 0010.scaffold00043 395421 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 395423 1 G T scaffold1019 ScafM SNP 0010.scaffold00043 395435 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 395438 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 395441 1 A G scaffold1019 Both SNP 0010.scaffold00043 395486 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 395537 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 395624 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 395627 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 395630 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 395653 2 TC CT scaffold1019 ScafM SNP 0010.scaffold00043 395661 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 395675 2 TC CA scaffold1019 ScafM SNP 0010.scaffold00043 395690 1 A G scaffold1019 ScafM SNP 0010.scaffold00043 395711 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 395726 4 .... GTAT scaffold1019 ScafM INDEL 0010.scaffold00043 395735 2 .. AT scaffold1019 ScafM SNP 0010.scaffold00043 395743 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 395759 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 395816 8 ........ ACAGTAGC scaffold1019 ScafM INDEL 0010.scaffold00043 395824 1 G . scaffold1019 ScafM INDEL 0010.scaffold00043 395834 3 TAG ... scaffold1019 ScafM SNP 0010.scaffold00043 395994 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 396000 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 396025 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 396054 1 A T scaffold1019 ScafM SNP 0010.scaffold00043 396072 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 396115 1 T G scaffold1019 ScafM SNP 0010.scaffold00043 396195 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 397372 1 . A scaffold1019 ScafM SNP 0010.scaffold00043 397374 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 397443 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 397465 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 397471 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 397480 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 397488 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 397508 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 397533 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 397535 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 397537 1 A G scaffold1019 ScafM INDEL 0010.scaffold00043 397561 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 397643 1 T C scaffold1019 ScafM INDEL 0010.scaffold00043 397845 1 G . scaffold1019 Both INDEL 0010.scaffold00043 397928 1 . A scaffold1019 ScafM SNP 0010.scaffold00043 397947 1 G C scaffold1019 ScafM SNP 0010.scaffold00043 398020 2 CA TC scaffold1019 ScafM INDEL 0010.scaffold00043 398029 9 CAATCCCAC ......... scaffold1019 ScafM INDEL 0010.scaffold00043 398059 1 C . scaffold1019 ScafM INDEL 0010.scaffold00043 398061 1 A . scaffold1019 ScafM INDEL 0010.scaffold00043 398063 1 C . scaffold1019 ScafM INDEL 0010.scaffold00043 398093 1 . A scaffold1019 ReadM INDEL 0010.scaffold00043 404482 1 . T - ScafM INDEL 0010.scaffold00043 409631 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 409650 1 A C scaffold1019 ScafM SNP 0010.scaffold00043 409706 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 409708 1 C A scaffold1019 ScafM SNP 0010.scaffold00043 409712 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 409724 1 G A scaffold1019 ScafM SNP 0010.scaffold00043 409728 1 C T scaffold1019 ScafM SNP 0010.scaffold00043 409733 1 C T scaffold1019 ScafM INDEL 0010.scaffold00043 409751 1 . T scaffold1019 ScafM SNP 0010.scaffold00043 409753 1 T C scaffold1019 ScafM SNP 0010.scaffold00043 409777 2 TA AT scaffold1019 ScafM SNP 0010.scaffold00043 409781 1 G A scaffold1019 ScafM SNP 0011.scaffold00043 144 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 149 1 G A scaffold7611 ReadM SNP 0011.scaffold00043 234 1 T C - ReadM SNP 0011.scaffold00043 312 1 A C - ScafM SNP 0011.scaffold00043 325 1 A G scaffold7611 Both SNP 0011.scaffold00043 513 1 A G scaffold7611 Both SNP 0011.scaffold00043 570 1 T G scaffold7611 Both SNP 0011.scaffold00043 676 1 C T scaffold7611 Both SNP 0011.scaffold00043 748 1 A G scaffold7611 Both SNP 0011.scaffold00043 936 1 T G scaffold7611 ReadM SNP 0011.scaffold00043 1224 1 A G - ReadM SNP 0011.scaffold00043 1384 1 T C - ReadM SNP 0011.scaffold00043 1473 1 C T - ReadM SNP 0011.scaffold00043 1494 1 C A - ReadM SNP 0011.scaffold00043 1635 1 C A - ScafM SNP 0011.scaffold00043 1665 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 1672 2 CC TT scaffold7611 ScafM SNP 0011.scaffold00043 1741 3 AAA TTT scaffold7611 ScafM SNP 0011.scaffold00043 2490 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 2785 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 2826 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 2829 2 TG CT scaffold7611 ScafM SNP 0011.scaffold00043 2848 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 2870 1 A C scaffold7611 ReadM SNP 0011.scaffold00043 4608 1 T C - ReadM SNP 0011.scaffold00043 6459 1 T A - ScafM INDEL 0011.scaffold00043 6614 2 CA .. scaffold7611 ScafM INDEL 0011.scaffold00043 6617 3 TTC ... scaffold7611 ScafM SNP 0011.scaffold00043 6621 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 6855 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 6864 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 6872 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 6878 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 7660 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 7666 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 7670 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 7695 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 7699 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 7703 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 7714 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 7740 1 A G scaffold7611 ReadM SNP 0011.scaffold00043 7926 1 A G - ReadM SNP 0011.scaffold00043 8191 1 T C - ReadM INDEL 0011.scaffold00043 8220 1 . T - Both SNP 0011.scaffold00043 8650 1 A G scaffold7611 Both SNP 0011.scaffold00043 8720 1 C T scaffold7611 Both SNP 0011.scaffold00043 8950 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 8955 1 A G scaffold7611 ReadM INDEL 0011.scaffold00043 9010 2 .. TA - ReadM SNP 0011.scaffold00043 9066 1 G A - ReadM INDEL 0011.scaffold00043 9164 1 T . - ScafM SNP 0011.scaffold00043 9269 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 9286 1 A T scaffold7611 Both SNP 0011.scaffold00043 9447 1 A G scaffold7611 Both SNP 0011.scaffold00043 9509 1 G T scaffold7611 ScafM INDEL 0011.scaffold00043 9653 3 ... AAA scaffold7611 ScafM INDEL 0011.scaffold00043 9667 6 ...... AAACAA scaffold7611 ScafM SNP 0011.scaffold00043 9818 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 9823 14 .............. AGTTGTAAGTTGTA scaffold7611 ScafM INDEL 0011.scaffold00043 9855 3 AGT ... scaffold7611 ScafM SNP 0011.scaffold00043 9984 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 10003 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 10011 1 C . scaffold7611 ScafM INDEL 0011.scaffold00043 10013 1 A . scaffold7611 ScafM INDEL 0011.scaffold00043 10015 1 A . scaffold7611 Both SNP 0011.scaffold00043 10078 1 G T scaffold7611 Both SNP 0011.scaffold00043 10102 1 A G scaffold7611 Both SNP 0011.scaffold00043 10123 1 A G scaffold7611 Both SNP 0011.scaffold00043 10505 1 G T scaffold7611 ScafM INDEL 0011.scaffold00043 10649 7 TAATTCA ....... scaffold7611 ScafM INDEL 0011.scaffold00043 10668 1 . G scaffold7611 Both SNP 0011.scaffold00043 10866 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 10897 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 10909 9 CTCTTTTTC ......... scaffold7611 ScafM SNP 0011.scaffold00043 10974 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 10987 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 11013 1 . C scaffold7611 ScafM INDEL 0011.scaffold00043 11014 4 .... AAAC scaffold7611 ScafM INDEL 0011.scaffold00043 11064 3 ACT ... scaffold7611 ScafM SNP 0011.scaffold00043 11081 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 11106 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 11110 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 11121 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 11144 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 11148 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 11156 3 ... CCA scaffold7611 ScafM SNP 0011.scaffold00043 11158 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 11173 21 AACCATCTCTGCTACTTGTAC ..................... scaffold7611 ScafM SNP 0011.scaffold00043 11227 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 11238 18 TTGTATTATGGATTCAGA .................. scaffold7611 ScafM INDEL 0011.scaffold00043 11258 3 GTC ... scaffold7611 ScafM SNP 0011.scaffold00043 11271 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 11288 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 11293 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 11297 1 C G scaffold7611 Both SNP 0011.scaffold00043 11352 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 11697 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 11709 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 11741 1 . T scaffold7611 ScafM INDEL 0011.scaffold00043 11752 6 ...... TTTTTC scaffold7611 ScafM INDEL 0011.scaffold00043 11801 12 ............ GGGAGAGAGAGA scaffold7611 ScafM SNP 0011.scaffold00043 12028 1 T A scaffold7611 ScafM INDEL 0011.scaffold00043 12029 1 . C scaffold7611 Both SNP 0011.scaffold00043 12106 1 C T scaffold7611 Both INDEL 0011.scaffold00043 12208 1 . T scaffold7611 ScafM SNP 0011.scaffold00043 12240 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 12257 1 G . scaffold7611 ReadM SNP 0011.scaffold00043 12387 1 G T - ReadM SNP 0011.scaffold00043 12445 1 T A - Both SNP 0011.scaffold00043 12612 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 12662 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 12678 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 12784 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 12833 3 TAA ATT scaffold7611 ScafM INDEL 0011.scaffold00043 12969 1 . A scaffold7611 ScafM INDEL 0011.scaffold00043 12971 2 .C AG scaffold7611 ScafM INDEL 0011.scaffold00043 12973 2 .. GA scaffold7611 ScafM INDEL 0011.scaffold00043 12977 1 . C scaffold7611 ScafM SNP 0011.scaffold00043 12979 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 12986 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 13019 1 C A scaffold7611 ScafM INDEL 0011.scaffold00043 13049 39 ....................................... TTTTTTAATTTTTTTTTTTGAGGGGAAGTCATTTTAATT scaffold7611 ScafM SNP 0011.scaffold00043 13087 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 13097 1 C A scaffold7611 Both INDEL 0011.scaffold00043 13209 1 . T scaffold7611 ScafM SNP 0011.scaffold00043 13315 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 13351 9 ......... ATTAGTTCT scaffold7611 Both SNP 0011.scaffold00043 13477 1 C T scaffold7611 Both SNP 0011.scaffold00043 13587 1 T C scaffold7611 Both SNP 0011.scaffold00043 13604 1 A T scaffold7611 Both SNP 0011.scaffold00043 13757 1 T C scaffold7611 Both SNP 0011.scaffold00043 13976 1 A G scaffold7611 Both SNP 0011.scaffold00043 13983 1 G A scaffold7611 Both SNP 0011.scaffold00043 14014 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 14628 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 14631 1 A . scaffold7611 ScafM INDEL 0011.scaffold00043 14635 1 . T scaffold7611 ScafM SNP 0011.scaffold00043 14763 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 14781 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 14789 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 14793 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 14804 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 14832 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 14844 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 14856 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 14891 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 14922 1 T . scaffold7611 ScafM INDEL 0011.scaffold00043 14925 7 ATGGAAT ....... scaffold7611 ScafM INDEL 0011.scaffold00043 14933 2 TG .. scaffold7611 Both INDEL 0011.scaffold00043 15074 1 G . scaffold7611 Both SNP 0011.scaffold00043 15148 1 T C scaffold7611 Both SNP 0011.scaffold00043 15177 1 A T scaffold7611 Both SNP 0011.scaffold00043 15340 1 A C scaffold7611 Both SNP 0011.scaffold00043 15349 1 T C scaffold7611 Both SNP 0011.scaffold00043 15408 1 G A scaffold7611 Both SNP 0011.scaffold00043 15428 1 C T scaffold7611 Both SNP 0011.scaffold00043 15473 1 G C scaffold7611 Both INDEL 0011.scaffold00043 15491 2 .. AT scaffold7611 Both INDEL 0011.scaffold00043 15632 1 T . scaffold7611 Both SNP 0011.scaffold00043 15640 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 15669 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 15680 2 CG TA scaffold7611 ScafM SNP 0011.scaffold00043 15694 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 15770 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 15773 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 15780 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 15786 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 15802 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 15817 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 15819 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 15827 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 15852 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 15862 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 15886 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 15913 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 15928 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 15953 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 15965 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 15980 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 15990 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 16034 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 16062 1 C A scaffold7611 ScafM INDEL 0011.scaffold00043 16086 1 A . scaffold7611 ScafM SNP 0011.scaffold00043 16100 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 16134 3 ATC ... scaffold7611 ScafM SNP 0011.scaffold00043 16138 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 16140 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 16143 2 TG AT scaffold7611 ScafM INDEL 0011.scaffold00043 16148 2 GA .C scaffold7611 ScafM SNP 0011.scaffold00043 16151 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 16153 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 16162 1 C . scaffold7611 ScafM SNP 0011.scaffold00043 16171 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 16198 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 16218 14 TTGTATGCATAAAA .............. scaffold7611 ScafM SNP 0011.scaffold00043 16246 1 C G scaffold7611 ScafM INDEL 0011.scaffold00043 16259 2 .. TA scaffold7611 ScafM SNP 0011.scaffold00043 16262 2 CC AT scaffold7611 ScafM SNP 0011.scaffold00043 16334 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 16354 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 16370 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 16383 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 16408 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 16417 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 16437 3 ... AGT scaffold7611 ScafM SNP 0011.scaffold00043 16495 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 16505 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 16506 1 . A scaffold7611 ScafM SNP 0011.scaffold00043 16512 2 AA TT scaffold7611 ScafM SNP 0011.scaffold00043 16516 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 16519 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 16521 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 16522 2 .. AC scaffold7611 ScafM SNP 0011.scaffold00043 16524 2 TT AA scaffold7611 ScafM SNP 0011.scaffold00043 16528 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 16530 4 ..TT GCAC scaffold7611 ScafM SNP 0011.scaffold00043 16540 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 16553 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 16751 2 TT GA scaffold7611 ScafM INDEL 0011.scaffold00043 16757 2 CC .T scaffold7611 ScafM SNP 0011.scaffold00043 16771 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 16773 1 G . scaffold7611 ScafM SNP 0011.scaffold00043 16775 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 16779 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 16785 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 16806 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 16831 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 16844 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 16849 4 .... GGAT scaffold7611 ScafM INDEL 0011.scaffold00043 16850 1 . A scaffold7611 ScafM INDEL 0011.scaffold00043 16852 2 .. GG scaffold7611 Both SNP 0011.scaffold00043 16921 1 C T scaffold7611 Both SNP 0011.scaffold00043 17050 1 G T scaffold7611 Both INDEL 0011.scaffold00043 17101 1 G . scaffold7611 Both SNP 0011.scaffold00043 17150 1 C G scaffold7611 Both SNP 0011.scaffold00043 17168 1 G A scaffold7611 Both SNP 0011.scaffold00043 17280 1 C G scaffold7611 ScafM INDEL 0011.scaffold00043 17311 4 .... ACTC scaffold7611 ScafM SNP 0011.scaffold00043 17322 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17371 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 17378 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 17384 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 17389 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 17405 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17412 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17445 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 17463 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17479 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 17481 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 17483 1 A T scaffold7611 ScafM INDEL 0011.scaffold00043 17649 2 .. AA scaffold7611 ScafM SNP 0011.scaffold00043 17680 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 17687 31 ATTGGGGTATTATCATAATTGGAAGAAAGAG ............................... scaffold7611 ScafM SNP 0011.scaffold00043 17733 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 17762 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17772 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 17881 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 17896 2 CC GG scaffold7611 ScafM SNP 0011.scaffold00043 17901 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 17917 1 G T scaffold7611 ScafM INDEL 0011.scaffold00043 17931 1 . A scaffold7611 ScafM SNP 0011.scaffold00043 17957 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 17973 1 A T scaffold7611 ScafM INDEL 0011.scaffold00043 17995 4 .... CTCC scaffold7611 ScafM SNP 0011.scaffold00043 18008 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 18039 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 18065 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 18115 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 18126 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 18158 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 18160 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 18171 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 18176 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 18185 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 18200 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 19431 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 19498 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 19527 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 19679 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 19705 14 TATACGCAAGTGAA .............. scaffold7611 ScafM SNP 0011.scaffold00043 19730 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 19773 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 19830 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 19832 2 AA TT scaffold7611 ScafM SNP 0011.scaffold00043 19855 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 19923 2 AA GG scaffold7611 ScafM SNP 0011.scaffold00043 19932 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 19939 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 19949 1 A G scaffold7611 ReadM SNP 0011.scaffold00043 20071 1 C T - ReadM SNP 0011.scaffold00043 20142 1 A G - ReadM SNP 0011.scaffold00043 20282 1 A T - ScafM SNP 0011.scaffold00043 20678 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 20847 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 20864 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 20893 3 ... AAA scaffold7611 ScafM INDEL 0011.scaffold00043 21058 3 ... AGT scaffold7611 ScafM INDEL 0011.scaffold00043 21094 8 ........ TGCGTATG scaffold7611 ScafM SNP 0011.scaffold00043 21282 1 T G scaffold7611 ScafM INDEL 0011.scaffold00043 21293 1 C . scaffold7611 Both SNP 0011.scaffold00043 22118 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 22213 1 A T scaffold7611 Both SNP 0011.scaffold00043 22287 1 C G scaffold7611 Both SNP 0011.scaffold00043 22415 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 22575 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 22581 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 22586 1 . T scaffold7611 ScafM SNP 0011.scaffold00043 22617 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 22634 1 G T scaffold7611 ScafM INDEL 0011.scaffold00043 22695 12 ............ CTGAATGTGTAC scaffold7611 ScafM SNP 0011.scaffold00043 22715 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 22724 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 22730 4 .... GGAG scaffold7611 ScafM INDEL 0011.scaffold00043 22733 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 22739 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 22742 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 22763 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 22777 2 TC CT scaffold7611 ScafM SNP 0011.scaffold00043 22784 1 A G scaffold7611 Both SNP 0011.scaffold00043 22796 1 C G scaffold7611 Both SNP 0011.scaffold00043 22820 1 G A scaffold7611 Both SNP 0011.scaffold00043 23029 1 C T scaffold7611 Both SNP 0011.scaffold00043 23062 1 A G scaffold7611 Both SNP 0011.scaffold00043 23093 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 23142 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 23149 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 23154 1 A . scaffold7611 ScafM SNP 0011.scaffold00043 23156 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 23161 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 23167 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 23178 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 23183 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 23185 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 23203 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 23205 1 C G scaffold7611 ScafM INDEL 0011.scaffold00043 23225 7 ....... ACTCTTA scaffold7611 ScafM INDEL 0011.scaffold00043 23226 3 ... ACT scaffold7611 ScafM SNP 0011.scaffold00043 23246 2 GT AG scaffold7611 ScafM SNP 0011.scaffold00043 23266 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 23271 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 23274 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 23278 1 A . scaffold7611 ScafM SNP 0011.scaffold00043 23282 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 23286 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 23293 2 TC AG scaffold7611 ScafM SNP 0011.scaffold00043 23301 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 23304 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 23335 2 CA TG scaffold7611 ScafM SNP 0011.scaffold00043 23339 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 23342 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 23344 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 23349 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 23357 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 23361 1 C G scaffold7611 Both SNP 0011.scaffold00043 23429 1 A G scaffold7611 Both INDEL 0011.scaffold00043 23568 1 . T scaffold7611 Both SNP 0011.scaffold00043 23965 1 A T scaffold7611 Both SNP 0011.scaffold00043 24043 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 24257 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 24276 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 24334 2 CG TT scaffold7611 ScafM INDEL 0011.scaffold00043 24373 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 24377 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 24395 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 24399 2 TT AA scaffold7611 ScafM SNP 0011.scaffold00043 24896 1 A G scaffold7611 ReadM SNP 0011.scaffold00043 25182 1 G C - ScafM INDEL 0011.scaffold00043 25301 7 AGTTGGA ....... scaffold7611 ScafM SNP 0011.scaffold00043 25343 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 25370 6 CCAGGC ...... scaffold7611 Both SNP 0011.scaffold00043 25420 1 A T scaffold7611 Both SNP 0011.scaffold00043 25780 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 25823 6 ...... TATTTT scaffold7611 Both SNP 0011.scaffold00043 26001 1 T A scaffold7611 ReadM SNP 0011.scaffold00043 26243 1 T C - Both SNP 0011.scaffold00043 26615 1 C T scaffold7611 Both SNP 0011.scaffold00043 26675 1 G A scaffold7611 Both SNP 0011.scaffold00043 26958 1 T C scaffold7611 Both SNP 0011.scaffold00043 27466 1 A G scaffold7611 Both SNP 0011.scaffold00043 27649 1 A T scaffold7611 Both SNP 0011.scaffold00043 27926 1 G A scaffold7611 Both SNP 0011.scaffold00043 28262 1 T A scaffold7611 Both SNP 0011.scaffold00043 28602 1 G T scaffold7611 Both SNP 0011.scaffold00043 28738 1 C T scaffold7611 Both SNP 0011.scaffold00043 28765 1 A T scaffold7611 Both SNP 0011.scaffold00043 28860 1 A G scaffold7611 Both SNP 0011.scaffold00043 28978 1 G A scaffold7611 Both SNP 0011.scaffold00043 29071 1 C T scaffold7611 Both SNP 0011.scaffold00043 29102 1 C T scaffold7611 ReadM SNP 0011.scaffold00043 29360 1 T C - ReadM SNP 0011.scaffold00043 29369 1 G A - ReadM SNP 0011.scaffold00043 29404 1 T C - Both SNP 0011.scaffold00043 29476 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 29606 2 AG GA scaffold7611 Both SNP 0011.scaffold00043 29629 1 G A scaffold7611 Both INDEL 0011.scaffold00043 29687 1 A . scaffold7611 Both INDEL 0011.scaffold00043 29730 2 .. GA scaffold7611 ScafM INDEL 0011.scaffold00043 29949 2 AT .. scaffold7611 Both SNP 0011.scaffold00043 29997 1 G A scaffold7611 ReadM SNP 0011.scaffold00043 30030 1 C T - ReadM SNP 0011.scaffold00043 30049 1 T G - ReadM SNP 0011.scaffold00043 30177 1 C T - ScafM INDEL 0011.scaffold00043 30376 4 .... TATT scaffold7611 ScafM INDEL 0011.scaffold00043 30378 3 ... TGT scaffold7611 ScafM SNP 0011.scaffold00043 30528 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 30593 1 C T scaffold7611 ReadM SNP 0011.scaffold00043 31144 1 T C - ReadM SNP 0011.scaffold00043 31235 1 A T - ReadM SNP 0011.scaffold00043 31266 1 G C - ReadM SNP 0011.scaffold00043 31348 1 C T - ReadM SNP 0011.scaffold00043 31414 1 T G - ReadM SNP 0011.scaffold00043 31768 1 A C - ReadM SNP 0011.scaffold00043 31776 1 G A - ReadM SNP 0011.scaffold00043 32460 1 G A - ReadM SNP 0011.scaffold00043 32562 1 T G - ReadM SNP 0011.scaffold00043 32564 1 A G - Both SNP 0011.scaffold00043 33114 1 A G scaffold7611 ReadM INDEL 0011.scaffold00043 33169 1 . T - ReadM SNP 0011.scaffold00043 33256 1 G A - ReadM SNP 0011.scaffold00043 33300 1 G A - ReadM SNP 0011.scaffold00043 33552 1 C T - Both SNP 0011.scaffold00043 33687 1 A C scaffold7611 Both INDEL 0011.scaffold00043 33747 1 . G scaffold7611 Both SNP 0011.scaffold00043 33943 1 T C scaffold7611 Both SNP 0011.scaffold00043 33983 1 C A scaffold7611 Both SNP 0011.scaffold00043 34029 1 C T scaffold7611 Both SNP 0011.scaffold00043 34081 1 C T scaffold7611 Both SNP 0011.scaffold00043 34096 1 C A scaffold7611 ScafM INDEL 0011.scaffold00043 34108 1 T . scaffold7611 ScafM INDEL 0011.scaffold00043 34263 15 ............... TTTGCAAAAACTTGT scaffold7611 ScafM SNP 0011.scaffold00043 34285 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 34303 4 .... TCCT scaffold7611 ScafM SNP 0011.scaffold00043 34315 1 T C scaffold7611 Both SNP 0011.scaffold00043 34380 1 T C scaffold7611 Both SNP 0011.scaffold00043 34404 1 A C scaffold7611 ReadM SNP 0011.scaffold00043 34577 1 G C - ReadM SNP 0011.scaffold00043 34624 1 G A - ReadM SNP 0011.scaffold00043 34647 1 C T - ReadM SNP 0011.scaffold00043 34681 1 G A - ReadM SNP 0011.scaffold00043 34708 1 A C - ScafM SNP 0011.scaffold00043 36747 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 36752 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 36770 1 T C scaffold7611 ReadM INDEL 0011.scaffold00043 37244 1 . T - ReadM SNP 0011.scaffold00043 37277 1 G A - ReadM SNP 0011.scaffold00043 37316 1 C A - ReadM SNP 0011.scaffold00043 37328 1 A T - ReadM SNP 0011.scaffold00043 37449 1 A T - ReadM SNP 0011.scaffold00043 37755 1 T C - ReadM SNP 0011.scaffold00043 37760 1 A G - ReadM SNP 0011.scaffold00043 37786 1 C T - ReadM SNP 0011.scaffold00043 37861 1 T A - ReadM SNP 0011.scaffold00043 37998 1 A T - ReadM SNP 0011.scaffold00043 38030 1 G A - ReadM SNP 0011.scaffold00043 38065 1 T A - ReadM SNP 0011.scaffold00043 38074 1 T C - ReadM SNP 0011.scaffold00043 38203 1 A G - ReadM SNP 0011.scaffold00043 38226 1 C G - ReadM SNP 0011.scaffold00043 38232 1 G C - ReadM SNP 0011.scaffold00043 38287 1 T A - ReadM SNP 0011.scaffold00043 38405 1 T A - ReadM SNP 0011.scaffold00043 38586 1 C T - ReadM SNP 0011.scaffold00043 38616 1 A T - ReadM INDEL 0011.scaffold00043 38666 1 A . - ReadM SNP 0011.scaffold00043 38850 1 A G - ReadM SNP 0011.scaffold00043 39044 1 G C - ReadM SNP 0011.scaffold00043 39047 1 G A - ReadM SNP 0011.scaffold00043 39122 1 T C - ReadM SNP 0011.scaffold00043 39199 1 C A - ReadM SNP 0011.scaffold00043 39330 1 A T - ReadM SNP 0011.scaffold00043 39360 1 A G - ReadM SNP 0011.scaffold00043 39417 1 T C - ReadM SNP 0011.scaffold00043 39425 1 T A - ScafM SNP 0011.scaffold00043 39909 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 39945 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 39960 1 G . scaffold7611 ScafM SNP 0011.scaffold00043 39972 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 39983 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 39988 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 40049 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 40054 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 40126 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 40149 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 40205 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 40207 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 40211 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 40240 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 40246 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 40254 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 40301 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 40352 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 40381 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 40396 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 40401 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 40409 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 40453 2 AG GA scaffold7611 ScafM SNP 0011.scaffold00043 40488 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 40543 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 40546 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 40557 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 40582 1 A G scaffold7611 ReadM SNP 0011.scaffold00043 40948 1 G C - ReadM SNP 0011.scaffold00043 40952 1 T C - ReadM SNP 0011.scaffold00043 40969 1 T C - ReadM SNP 0011.scaffold00043 41124 1 A G - ReadM SNP 0011.scaffold00043 41128 1 G A - ScafM SNP 0011.scaffold00043 41246 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 41258 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 41323 2 GC .A scaffold7611 ScafM SNP 0011.scaffold00043 41327 1 C G scaffold7611 ScafM INDEL 0011.scaffold00043 41330 1 . T scaffold7611 ScafM SNP 0011.scaffold00043 41335 2 GA AG scaffold7611 Both SNP 0011.scaffold00043 41428 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 41444 1 A T scaffold7611 ScafM INDEL 0011.scaffold00043 41449 1 C . scaffold7611 ScafM SNP 0011.scaffold00043 41469 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 41488 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 41503 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 41528 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 41543 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 41548 1 C T scaffold7611 Both SNP 0011.scaffold00043 41628 1 A C scaffold7611 Both SNP 0011.scaffold00043 41648 1 A C scaffold7611 Both SNP 0011.scaffold00043 41659 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 41695 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 41704 1 A G scaffold7611 Both SNP 0011.scaffold00043 41743 1 G A scaffold7611 Both SNP 0011.scaffold00043 41774 1 G A scaffold7611 Both SNP 0011.scaffold00043 41822 1 A C scaffold7611 Both SNP 0011.scaffold00043 41844 1 T C scaffold7611 ScafM INDEL 0011.scaffold00043 41867 17 TTTGTTTGTTTGCAATT ................. scaffold7611 ScafM INDEL 0011.scaffold00043 41885 1 A . scaffold7611 ScafM SNP 0011.scaffold00043 41896 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 41926 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 41951 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 41972 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 41977 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 41993 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 42015 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 42038 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 42050 1 C A scaffold7611 ScafM SNP 0011.scaffold00043 42087 1 G A scaffold7611 Both SNP 0011.scaffold00043 42121 1 G C scaffold7611 Both SNP 0011.scaffold00043 42134 1 A G scaffold7611 Both SNP 0011.scaffold00043 42233 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 42250 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 42260 1 T C scaffold7611 Both SNP 0011.scaffold00043 42266 1 T C scaffold7611 Both SNP 0011.scaffold00043 42307 1 G A scaffold7611 Both SNP 0011.scaffold00043 42370 1 G A scaffold7611 Both SNP 0011.scaffold00043 42379 1 A G scaffold7611 Both SNP 0011.scaffold00043 42396 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 42433 1 C G scaffold7611 ScafM INDEL 0011.scaffold00043 42457 5 ..... TAATT scaffold7611 ScafM INDEL 0011.scaffold00043 42483 4 TATA .... scaffold7611 ScafM SNP 0011.scaffold00043 42494 1 C A scaffold7611 ReadM SNP 0011.scaffold00043 42546 1 A C - ReadM SNP 0011.scaffold00043 42590 1 T C - ReadM SNP 0011.scaffold00043 42750 2 TT AC - ReadM SNP 0011.scaffold00043 42928 1 T A - ReadM INDEL 0011.scaffold00043 42977 1 . T - ReadM SNP 0011.scaffold00043 43108 1 T G - ReadM SNP 0011.scaffold00043 43130 1 T C - ScafM INDEL 0011.scaffold00043 43185 1 . T scaffold7611 ReadM SNP 0011.scaffold00043 43269 1 G A - ScafM SNP 0011.scaffold00043 43752 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 43764 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 44034 1 T A scaffold7611 ReadM SNP 0011.scaffold00043 44299 1 T C - ReadM SNP 0011.scaffold00043 44488 1 T G - ScafM INDEL 0011.scaffold00043 44845 4 ATAT .... scaffold7611 Both SNP 0011.scaffold00043 45059 1 G C scaffold7611 Both SNP 0011.scaffold00043 45217 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 45262 2 TT CC scaffold7611 Both SNP 0011.scaffold00043 45778 1 A G scaffold7611 Both SNP 0011.scaffold00043 45853 1 A G scaffold7611 Both INDEL 0011.scaffold00043 45956 1 T . scaffold7611 ScafM INDEL 0011.scaffold00043 46205 4 .... ATTA scaffold7611 Both SNP 0011.scaffold00043 46238 1 T A scaffold7611 Both INDEL 0011.scaffold00043 46251 1 T . scaffold7611 Both SNP 0011.scaffold00043 46320 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 46340 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 46715 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 46741 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 46753 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 46794 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 46813 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 46844 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 46920 8 ........ ATGATATA scaffold7611 ScafM SNP 0011.scaffold00043 46941 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 46979 1 A G scaffold7611 Both SNP 0011.scaffold00043 47094 1 G T scaffold7611 Both SNP 0011.scaffold00043 47192 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 47275 2 TC CT scaffold7611 ScafM SNP 0011.scaffold00043 47281 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 47286 4 GAGT .... scaffold7611 ScafM SNP 0011.scaffold00043 47298 1 C A scaffold7611 Both SNP 0011.scaffold00043 47355 1 A G scaffold7611 Both INDEL 0011.scaffold00043 47356 1 . G scaffold7611 Both SNP 0011.scaffold00043 47423 1 C T scaffold7611 Both SNP 0011.scaffold00043 47476 1 C T scaffold7611 Both SNP 0011.scaffold00043 47511 1 A G scaffold7611 Both SNP 0011.scaffold00043 47543 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 47578 3 TGA ... scaffold7611 ScafM INDEL 0011.scaffold00043 47600 1 G . scaffold7611 ScafM SNP 0011.scaffold00043 47607 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 47611 1 A T scaffold7611 Both SNP 0011.scaffold00043 47665 1 C T scaffold7611 Both SNP 0011.scaffold00043 47721 1 A G scaffold7611 Both SNP 0011.scaffold00043 47765 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 47797 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 48254 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 48267 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 48281 2 TA AT scaffold7611 ScafM SNP 0011.scaffold00043 48284 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 48310 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 48314 1 . A scaffold7611 ScafM INDEL 0011.scaffold00043 48336 1 C . scaffold7611 ScafM SNP 0011.scaffold00043 48343 2 TT CC scaffold7611 ScafM SNP 0011.scaffold00043 48348 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 48353 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 48376 2 .. AA scaffold7611 ScafM INDEL 0011.scaffold00043 48378 1 . A scaffold7611 ScafM INDEL 0011.scaffold00043 48380 3 ... TTT scaffold7611 ScafM SNP 0011.scaffold00043 48499 1 C A scaffold7611 ScafM INDEL 0011.scaffold00043 48509 2 TC .. scaffold7611 ScafM SNP 0011.scaffold00043 48514 1 T G scaffold7611 Both SNP 0011.scaffold00043 48578 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 48800 23 CATTCACTCTCTTGAATCTTACC ....................... scaffold7611 ScafM INDEL 0011.scaffold00043 48824 6 CCTCCT ...... scaffold7611 ScafM SNP 0011.scaffold00043 48838 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 48918 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 48941 2 AA CG scaffold7611 ScafM SNP 0011.scaffold00043 48972 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 49149 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 49218 2 .. TT scaffold7611 ScafM SNP 0011.scaffold00043 49235 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 49247 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 49257 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 49293 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 49341 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 49354 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 49359 3 ... AGT scaffold7611 ScafM SNP 0011.scaffold00043 49367 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 49983 1 A G scaffold7611 ScafM INDEL 0011.scaffold00043 50019 2 TT .. scaffold7611 ScafM INDEL 0011.scaffold00043 50025 3 TTC ... scaffold7611 ScafM SNP 0011.scaffold00043 50044 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 50051 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 50056 1 A C scaffold7611 ScafM INDEL 0011.scaffold00043 50078 3 ... ATT scaffold7611 ScafM SNP 0011.scaffold00043 50091 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 50116 1 G T scaffold7611 ScafM SNP 0011.scaffold00043 50131 1 C A scaffold7611 ScafM INDEL 0011.scaffold00043 50140 7 TTCGTCT ....... scaffold7611 ScafM INDEL 0011.scaffold00043 50148 1 T . scaffold7611 ScafM SNP 0011.scaffold00043 50166 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 50168 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 50170 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 50175 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 50237 1 G A scaffold7611 ScafM INDEL 0011.scaffold00043 50314 4 ATAT .... scaffold7611 ScafM SNP 0011.scaffold00043 50371 1 G A scaffold7611 ScafM SNP 0011.scaffold00043 50417 1 G C scaffold7611 ScafM SNP 0011.scaffold00043 50420 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 50463 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 50478 1 T A scaffold7611 Both SNP 0011.scaffold00043 50557 1 A G scaffold7611 Both SNP 0011.scaffold00043 50582 1 T C scaffold7611 Both SNP 0011.scaffold00043 50762 1 G A scaffold7611 Both SNP 0011.scaffold00043 50789 1 A G scaffold7611 Both SNP 0011.scaffold00043 50837 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 50871 1 A T scaffold7611 ScafM SNP 0011.scaffold00043 50878 1 C G scaffold7611 ScafM SNP 0011.scaffold00043 50882 1 A G scaffold7611 ScafM SNP 0011.scaffold00043 50924 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 50947 2 TT AA scaffold7611 ScafM SNP 0011.scaffold00043 50955 1 T G scaffold7611 ScafM SNP 0011.scaffold00043 50968 1 T A scaffold7611 ScafM SNP 0011.scaffold00043 50971 1 C T scaffold7611 ScafM INDEL 0011.scaffold00043 50996 1 A . scaffold7611 ScafM SNP 0011.scaffold00043 51225 1 G A scaffold7611 Both SNP 0011.scaffold00043 51280 1 A G scaffold7611 Both SNP 0011.scaffold00043 51331 1 G A scaffold7611 ReadM SNP 0011.scaffold00043 51467 1 C T - ReadM SNP 0011.scaffold00043 51507 1 C T - ReadM SNP 0011.scaffold00043 51685 1 C T - ReadM SNP 0011.scaffold00043 51835 1 T C - ReadM SNP 0011.scaffold00043 51852 1 A G - ReadM SNP 0011.scaffold00043 51932 1 T C - ReadM SNP 0011.scaffold00043 52058 1 C T - ReadM SNP 0011.scaffold00043 52127 1 T A - ReadM INDEL 0011.scaffold00043 52199 1 . A - ReadM SNP 0011.scaffold00043 52456 1 C T - ReadM SNP 0011.scaffold00043 52467 1 T C - ReadM SNP 0011.scaffold00043 52473 1 A C - ReadM SNP 0011.scaffold00043 52563 1 T A - ReadM SNP 0011.scaffold00043 52580 1 G T - ReadM INDEL 0011.scaffold00043 52618 1 . C - ReadM SNP 0011.scaffold00043 52632 1 T C - ReadM SNP 0011.scaffold00043 52693 1 A G - ReadM SNP 0011.scaffold00043 52746 1 C A - ReadM SNP 0011.scaffold00043 52771 1 T C - ReadM SNP 0011.scaffold00043 52848 1 G A - ReadM INDEL 0011.scaffold00043 52968 1 . A - ReadM INDEL 0011.scaffold00043 53079 1 . T - ReadM SNP 0011.scaffold00043 54082 1 A T - ReadM SNP 0011.scaffold00043 55263 1 G A - ReadM SNP 0011.scaffold00043 55864 1 T G - Both SNP 0011.scaffold00043 57469 1 T A scaffold4007 ReadM INDEL 0011.scaffold00043 58254 1 T . - ReadM SNP 0011.scaffold00043 58415 1 G A - Both SNP 0011.scaffold00043 60175 1 T A scaffold4007 Both SNP 0011.scaffold00043 60637 1 G A scaffold4007 Both SNP 0011.scaffold00043 60652 1 C T scaffold4007 ScafM INDEL 0011.scaffold00043 62093 1 . A scaffold4007 ReadM SNP 0011.scaffold00043 70440 1 A T - Both SNP 0011.scaffold00043 70599 1 T A scaffold18088 ReadM SNP 0011.scaffold00043 71078 1 G T - Both SNP 0011.scaffold00043 71141 1 A T scaffold18088 ReadM INDEL 0011.scaffold00043 71502 1 . T - ScafM SNP 0011.scaffold00043 71660 1 A T scaffold10655 ScafM INDEL 0011.scaffold00043 71699 28 ............................ GATGATCTAGGATTGTAGATTATCCATT scaffold10655 ScafM SNP 0011.scaffold00043 71735 1 A C scaffold10655 ReadM SNP 0011.scaffold00043 72197 1 C T - ReadM INDEL 0011.scaffold00043 72740 1 . T - ReadM SNP 0011.scaffold00043 72806 1 A T - ReadM SNP 0011.scaffold00043 72968 1 G T - ReadM SNP 0011.scaffold00043 74064 1 G T - ReadM SNP 0011.scaffold00043 75248 1 T G - ReadM SNP 0011.scaffold00043 76153 1 A C - ReadM SNP 0011.scaffold00043 76200 1 G A - ReadM SNP 0011.scaffold00043 76727 1 C T - ReadM SNP 0011.scaffold00043 77054 1 G C - ReadM SNP 0011.scaffold00043 77352 1 C T - ReadM SNP 0011.scaffold00043 78005 1 C T - ReadM SNP 0011.scaffold00043 78167 1 G A - ScafM INDEL 0011.scaffold00043 79007 1 T . C13835169 Both SNP 0011.scaffold00043 79067 1 A G C13835169 ScafM INDEL 0011.scaffold00043 79599 1 T . C13835169 ScafM SNP 0011.scaffold00043 80168 1 C A scaffold5373 ScafM SNP 0011.scaffold00043 80172 1 G T scaffold5373 ScafM SNP 0011.scaffold00043 80192 1 G A scaffold5373 ScafM SNP 0011.scaffold00043 80196 1 C A scaffold5373 ScafM SNP 0011.scaffold00043 80378 1 A G scaffold5373 ScafM SNP 0011.scaffold00043 80410 1 A G scaffold5373 ScafM SNP 0011.scaffold00043 81852 1 A G scaffold5373 Both SNP 0011.scaffold00043 81880 1 C T scaffold5373 Both SNP 0011.scaffold00043 81896 1 C A scaffold5373 ScafM SNP 0011.scaffold00043 82025 1 C T scaffold5373 ScafM SNP 0011.scaffold00043 82048 1 A T scaffold5373 ScafM SNP 0011.scaffold00043 82053 1 G A scaffold5373 Both SNP 0011.scaffold00043 82095 1 C A scaffold5373 Both SNP 0011.scaffold00043 82184 1 G C scaffold5373 Both SNP 0011.scaffold00043 82190 1 T A scaffold5373 Both SNP 0011.scaffold00043 82194 1 T A scaffold5373 Both SNP 0011.scaffold00043 82275 1 A C scaffold5373 Both SNP 0011.scaffold00043 82307 1 G T scaffold5373 Both SNP 0011.scaffold00043 82392 1 G T scaffold5373 Both SNP 0011.scaffold00043 82449 1 G T scaffold5373 Both SNP 0011.scaffold00043 82497 1 A T scaffold5373 Both SNP 0011.scaffold00043 82510 1 A T scaffold5373 Both SNP 0011.scaffold00043 82563 1 T C scaffold5373 Both SNP 0011.scaffold00043 82633 1 C G scaffold5373 ScafM SNP 0011.scaffold00043 82662 1 C G scaffold5373 ScafM SNP 0011.scaffold00043 82681 1 A G scaffold5373 ScafM SNP 0011.scaffold00043 82690 1 G A scaffold5373 ScafM SNP 0011.scaffold00043 82693 1 T A scaffold5373 ScafM SNP 0011.scaffold00043 82705 1 C G scaffold5373 ScafM INDEL 0011.scaffold00043 82708 4 .... ACTG scaffold5373 ScafM SNP 0011.scaffold00043 82724 1 A G scaffold5373 ScafM SNP 0011.scaffold00043 82744 1 G T scaffold5373 ScafM SNP 0011.scaffold00043 82781 1 T C scaffold5373 ScafM SNP 0011.scaffold00043 82804 1 A C scaffold5373 ScafM SNP 0011.scaffold00043 82817 1 C T scaffold5373 ScafM SNP 0011.scaffold00043 93234 1 T G scaffold15433 ScafM INDEL 0011.scaffold00043 93245 4 ATAT .... scaffold15433 ScafM SNP 0011.scaffold00043 93258 1 G A scaffold15433 ScafM SNP 0011.scaffold00043 93262 1 C T scaffold15433 ScafM SNP 0011.scaffold00043 93273 1 A C scaffold15433 ScafM SNP 0011.scaffold00043 93291 1 G C scaffold15433 ScafM SNP 0011.scaffold00043 93349 1 G C scaffold15433 ScafM SNP 0011.scaffold00043 93354 1 A G scaffold15433 ScafM INDEL 0011.scaffold00043 93363 4 .... GCAA scaffold15433 ScafM SNP 0011.scaffold00043 93375 2 TT AA scaffold15433 ScafM SNP 0011.scaffold00043 93451 1 T G scaffold15433 Both SNP 0011.scaffold00043 93535 1 C T scaffold15433 Both SNP 0011.scaffold00043 93832 1 G C scaffold15433 ScafM INDEL 0011.scaffold00043 94037 2 .. AA scaffold15433 ScafM SNP 0011.scaffold00043 94038 1 G C scaffold15433 ScafM SNP 0011.scaffold00043 94041 1 C A scaffold15433 Both SNP 0011.scaffold00043 94076 1 T C scaffold15433 Both SNP 0011.scaffold00043 94148 1 A G scaffold15433 Both SNP 0011.scaffold00043 94319 1 C T scaffold15433 Both SNP 0011.scaffold00043 95484 1 T G scaffold15433 Both SNP 0011.scaffold00043 95765 1 T G scaffold15433 ScafM SNP 0011.scaffold00043 96270 1 C A scaffold15433 ScafM SNP 0011.scaffold00043 96306 1 C T scaffold15433 ScafM SNP 0011.scaffold00043 96310 2 TA GC scaffold15433 ScafM INDEL 0011.scaffold00043 96332 2 AA .. scaffold15433 ScafM SNP 0011.scaffold00043 96349 1 A C scaffold15433 ScafM SNP 0011.scaffold00043 96361 1 G T scaffold15433 ScafM SNP 0011.scaffold00043 96397 1 A G scaffold15433 ScafM SNP 0011.scaffold00043 96411 1 A T scaffold15433 ScafM SNP 0011.scaffold00043 96413 1 T C scaffold15433 ScafM SNP 0011.scaffold00043 96442 1 T G scaffold15433 ScafM SNP 0011.scaffold00043 96476 1 T G scaffold15433 ScafM SNP 0011.scaffold00043 96482 1 C T scaffold15433 ScafM INDEL 0011.scaffold00043 96488 1 A . scaffold15433 ScafM INDEL 0011.scaffold00043 96513 1 G . scaffold15433 ScafM INDEL 0011.scaffold00043 96530 1 G . scaffold15433 ScafM SNP 0011.scaffold00043 96538 1 A T scaffold15433 ScafM SNP 0011.scaffold00043 96588 1 T A scaffold15433 ScafM SNP 0011.scaffold00043 96598 1 C T scaffold15433 ScafM INDEL 0011.scaffold00043 96610 1 . A scaffold15433 ScafM SNP 0011.scaffold00043 96669 1 G T scaffold15433 ScafM SNP 0011.scaffold00043 96673 1 C G scaffold15433 ScafM SNP 0011.scaffold00043 96675 1 G C scaffold15433 ScafM SNP 0011.scaffold00043 96680 1 C T scaffold15433 ScafM SNP 0011.scaffold00043 96736 1 G A scaffold15433 ScafM SNP 0011.scaffold00043 96748 1 G A scaffold15433 ScafM SNP 0011.scaffold00043 96750 1 C A scaffold15433 ScafM SNP 0011.scaffold00043 96775 1 T C scaffold15433 ScafM SNP 0011.scaffold00043 96778 1 C T scaffold15433 ScafM SNP 0011.scaffold00043 96796 1 G C scaffold15433 ScafM SNP 0011.scaffold00043 96831 1 C T scaffold15433 Both SNP 0011.scaffold00043 97179 1 A G scaffold15433 Both SNP 0011.scaffold00043 97997 1 C T scaffold15433 Both SNP 0011.scaffold00043 98498 1 A G scaffold15433 Both SNP 0011.scaffold00043 99572 1 G A scaffold15433 Both SNP 0011.scaffold00043 99582 1 C T scaffold15433 Both SNP 0011.scaffold00043 100497 1 G T scaffold15433 ReadM INDEL 0011.scaffold00043 101579 1 . T - ReadM SNP 0011.scaffold00043 103538 1 A G - ReadM INDEL 0011.scaffold00043 103795 2 TT .. - ReadM SNP 0011.scaffold00043 105290 1 C T - ReadM INDEL 0011.scaffold00043 105425 2 .. TG - Both SNP 0011.scaffold00043 106185 1 A T scaffold15433 ScafM INDEL 0011.scaffold00043 106956 1 A . scaffold15433 ReadM SNP 0011.scaffold00043 107306 1 G A - ScafM INDEL 0011.scaffold00043 108989 1 T . scaffold15433 ScafM SNP 0011.scaffold00043 113610 1 A C scaffold15433 Both SNP 0011.scaffold00043 114021 1 G A scaffold15433 ReadM SNP 0011.scaffold00043 114332 1 A G - ReadM SNP 0011.scaffold00043 120004 1 T C - ReadM SNP 0011.scaffold00043 120905 1 T G - ReadM SNP 0011.scaffold00043 121104 1 T C - Both SNP 0011.scaffold00043 121187 1 T C scaffold15433 Both SNP 0011.scaffold00043 121342 1 T G scaffold15433 Both SNP 0011.scaffold00043 121374 1 G A scaffold15433 ReadM SNP 0011.scaffold00043 121613 1 A C - ReadM SNP 0011.scaffold00043 121980 1 C T - ScafM SNP 0011.scaffold00043 122103 2 AC GG scaffold20718 ScafM SNP 0011.scaffold00043 122110 1 T A scaffold20718 ScafM SNP 0011.scaffold00043 122117 1 T A scaffold20718 ScafM SNP 0011.scaffold00043 122134 1 A G scaffold20718 ScafM SNP 0011.scaffold00043 122142 1 T A scaffold20718 ScafM SNP 0011.scaffold00043 122178 1 C T scaffold20718 ScafM INDEL 0011.scaffold00043 122211 5 ..... ATTAA scaffold20718 ScafM SNP 0011.scaffold00043 122225 1 C T scaffold20718 ScafM SNP 0011.scaffold00043 122227 1 G C scaffold20718 ScafM INDEL 0011.scaffold00043 122229 1 G . scaffold20718 ScafM SNP 0011.scaffold00043 122235 1 C T scaffold20718 ScafM SNP 0011.scaffold00043 122237 1 A G scaffold20718 ScafM SNP 0011.scaffold00043 122264 1 C A scaffold20718 ScafM SNP 0011.scaffold00043 122271 1 C A scaffold20718 ScafM SNP 0011.scaffold00043 122275 1 G T scaffold20718 ScafM SNP 0011.scaffold00043 122277 1 A C scaffold20718 ScafM SNP 0011.scaffold00043 122281 1 G T scaffold20718 ScafM SNP 0011.scaffold00043 122298 1 C T scaffold20718 ScafM SNP 0011.scaffold00043 122308 1 T C scaffold20718 ScafM SNP 0011.scaffold00043 122314 1 C T scaffold20718 ScafM SNP 0011.scaffold00043 122317 1 C T scaffold20718 ScafM SNP 0011.scaffold00043 122322 1 T C scaffold20718 ScafM INDEL 0011.scaffold00043 122352 1 A . scaffold20718 ScafM SNP 0011.scaffold00043 122354 1 A C scaffold20718 ScafM SNP 0011.scaffold00043 122599 1 C T scaffold15433 Both SNP 0011.scaffold00043 123132 1 A C scaffold15433 ReadM SNP 0011.scaffold00043 123615 1 C T - ReadM SNP 0011.scaffold00043 123689 1 A G - ReadM SNP 0011.scaffold00043 123707 1 G A - ReadM SNP 0011.scaffold00043 123840 1 G A - ReadM INDEL 0011.scaffold00043 124218 3 TAA ... - ReadM SNP 0011.scaffold00043 124991 1 C T - ReadM SNP 0011.scaffold00043 125042 1 A G - ScafM SNP 0011.scaffold00043 125950 1 T C scaffold15433 ScafM SNP 0011.scaffold00043 125954 1 T C scaffold15433 ScafM SNP 0011.scaffold00043 126043 1 A G scaffold15433 ReadM SNP 0011.scaffold00043 126371 1 C A - ReadM INDEL 0011.scaffold00043 127451 1 . T - ReadM SNP 0011.scaffold00043 129985 1 G A - ReadM SNP 0011.scaffold00043 130465 1 A C - ScafM INDEL 0011.scaffold00043 130576 11 ........... TATTCACAAAA scaffold15433 ReadM SNP 0011.scaffold00043 130824 1 C T - ReadM SNP 0011.scaffold00043 130978 1 C T - ReadM SNP 0011.scaffold00043 131152 1 T A - ScafM INDEL 0011.scaffold00043 132120 33 TTTTAGTTTGTTTTAGTCCCCTAACACGCTAAC ................................. scaffold15433 Both INDEL 0011.scaffold00043 132679 1 C . scaffold15433 Both SNP 0011.scaffold00043 132832 1 T C scaffold15433 ScafM SNP 0011.scaffold00043 133095 1 C T scaffold15433 ReadM SNP 0011.scaffold00043 137524 1 T C - ScafM SNP 0011.scaffold00043 138131 1 T C scaffold6713 ScafM SNP 0011.scaffold00043 138156 1 T C scaffold6713 ReadM SNP 0011.scaffold00043 138479 1 C G - ReadM SNP 0011.scaffold00043 139545 1 T A - ReadM SNP 0011.scaffold00043 139643 1 G A - Both INDEL 0011.scaffold00043 140454 1 T . scaffold14406 ReadM SNP 0011.scaffold00043 141165 1 T C - ReadM SNP 0011.scaffold00043 141264 1 T A - ReadM SNP 0012.scaffold00044 695 1 T C - ReadM SNP 0012.scaffold00044 765 1 T C - ReadM SNP 0012.scaffold00044 901 1 A T - ReadM SNP 0012.scaffold00044 1004 1 C T - ReadM SNP 0012.scaffold00044 1038 1 C T - ReadM SNP 0012.scaffold00044 1050 1 C T - Both SNP 0012.scaffold00044 1107 1 C T scaffold6580 Both SNP 0012.scaffold00044 1313 1 C A scaffold6580 Both SNP 0012.scaffold00044 1319 1 T C scaffold6580 ReadM INDEL 0012.scaffold00044 1433 1 T . - ScafM SNP 0012.scaffold00044 1475 2 GC TT scaffold6580 ReadM INDEL 0012.scaffold00044 1698 2 .. AA - ReadM SNP 0012.scaffold00044 2834 1 A T - ReadM SNP 0012.scaffold00044 3518 1 G A - ReadM SNP 0012.scaffold00044 3670 1 G T - ReadM SNP 0012.scaffold00044 3700 1 T C - ReadM SNP 0012.scaffold00044 5372 1 T C - ReadM SNP 0012.scaffold00044 5441 1 C T - ReadM SNP 0012.scaffold00044 6456 1 C A - ReadM SNP 0012.scaffold00044 6489 1 A C - ReadM SNP 0012.scaffold00044 6925 1 C T - ReadM SNP 0012.scaffold00044 7021 1 G A - ReadM SNP 0012.scaffold00044 7180 1 A T - ReadM SNP 0012.scaffold00044 7633 1 C T - ReadM SNP 0012.scaffold00044 7791 1 G A - ReadM SNP 0012.scaffold00044 8837 1 A G - ReadM SNP 0012.scaffold00044 8843 1 C T - ReadM SNP 0012.scaffold00044 8984 1 G A - ReadM SNP 0012.scaffold00044 9272 1 C T - ReadM SNP 0012.scaffold00044 9363 1 A G - ReadM SNP 0012.scaffold00044 9389 1 A G - ReadM SNP 0012.scaffold00044 10756 1 G A - ReadM SNP 0012.scaffold00044 10786 1 A G - ReadM INDEL 0012.scaffold00044 10842 1 . T - ReadM SNP 0012.scaffold00044 10937 1 C T - ReadM SNP 0012.scaffold00044 11134 1 A G - ReadM SNP 0012.scaffold00044 11469 1 A G - ReadM SNP 0012.scaffold00044 11472 1 T A - ReadM SNP 0012.scaffold00044 11522 1 A G - Both SNP 0012.scaffold00044 11647 1 T A scaffold6580 Both SNP 0012.scaffold00044 11879 1 T C scaffold6580 Both INDEL 0012.scaffold00044 11948 1 T . scaffold6580 ScafM INDEL 0012.scaffold00044 11980 1 T . scaffold6580 ReadM INDEL 0012.scaffold00044 12519 1 T . - ReadM SNP 0012.scaffold00044 12544 1 G T - ReadM SNP 0012.scaffold00044 12672 1 C T - ReadM SNP 0012.scaffold00044 13098 1 T C - ReadM SNP 0012.scaffold00044 13374 1 T C - ReadM SNP 0012.scaffold00044 13920 1 G A - ReadM SNP 0012.scaffold00044 14050 1 G C - ReadM SNP 0012.scaffold00044 14107 1 A C - ReadM SNP 0012.scaffold00044 14293 1 T C - ReadM SNP 0012.scaffold00044 14889 1 G T - ReadM SNP 0012.scaffold00044 15508 1 T C - ReadM SNP 0012.scaffold00044 15779 1 G T - ReadM SNP 0012.scaffold00044 20989 2 CG AT - ReadM SNP 0012.scaffold00044 21567 1 T C - ReadM SNP 0012.scaffold00044 21605 1 G A - ReadM SNP 0012.scaffold00044 21638 1 T C - ReadM SNP 0012.scaffold00044 22165 1 C T - ReadM SNP 0012.scaffold00044 22503 1 G T - ReadM SNP 0012.scaffold00044 22615 1 G C - ReadM SNP 0012.scaffold00044 23204 1 A T - ReadM SNP 0012.scaffold00044 23419 1 T C - ReadM SNP 0012.scaffold00044 23423 1 A G - ReadM SNP 0012.scaffold00044 23691 1 C A - ReadM SNP 0012.scaffold00044 24677 1 G A - ReadM SNP 0012.scaffold00044 24790 1 T G - ReadM SNP 0012.scaffold00044 24870 1 G A - ReadM SNP 0012.scaffold00044 26008 1 A T - ReadM SNP 0012.scaffold00044 26142 1 G C - Both SNP 0012.scaffold00044 26676 1 A G scaffold11559 ReadM SNP 0012.scaffold00044 27090 1 G C - ReadM SNP 0012.scaffold00044 27246 1 A T - ReadM SNP 0012.scaffold00044 27679 1 C T - ReadM SNP 0012.scaffold00044 27682 1 T G - ReadM SNP 0012.scaffold00044 27698 1 G T - ReadM SNP 0012.scaffold00044 27831 1 T C - ReadM SNP 0012.scaffold00044 28254 1 C T - ReadM INDEL 0012.scaffold00044 28256 1 C . - ReadM SNP 0012.scaffold00044 28356 1 A G - ReadM SNP 0012.scaffold00044 28775 1 A C - ReadM SNP 0012.scaffold00044 28823 1 T C - ReadM SNP 0012.scaffold00044 28885 1 C T - ReadM SNP 0012.scaffold00044 28909 2 TT CA - ReadM SNP 0012.scaffold00044 28967 1 C T - ReadM SNP 0012.scaffold00044 29088 1 T A - ReadM SNP 0012.scaffold00044 29311 1 A G - ReadM SNP 0012.scaffold00044 29683 1 T C - ReadM SNP 0012.scaffold00044 29764 1 A G - ReadM SNP 0012.scaffold00044 31494 1 T C - ReadM SNP 0012.scaffold00044 31672 1 T G - ReadM SNP 0012.scaffold00044 31699 1 G A - ReadM SNP 0012.scaffold00044 31922 1 T G - ReadM SNP 0012.scaffold00044 32209 1 G C - ReadM SNP 0012.scaffold00044 32319 1 A G - ReadM SNP 0012.scaffold00044 32324 1 A T - ReadM SNP 0012.scaffold00044 33079 1 T G - Both SNP 0012.scaffold00044 33139 1 C T scaffold11559 Both SNP 0012.scaffold00044 33281 1 G C scaffold11559 Both SNP 0012.scaffold00044 33317 1 A T scaffold11559 ScafM SNP 0012.scaffold00044 33359 1 A G scaffold11559 ScafM SNP 0012.scaffold00044 33486 1 T G scaffold11559 ScafM SNP 0012.scaffold00044 33492 1 A G scaffold11559 ScafM SNP 0012.scaffold00044 43210 1 A T scaffold44345 Both SNP 0012.scaffold00044 43242 1 A T scaffold44345 Both SNP 0012.scaffold00044 43354 1 A G scaffold44345 ScafM SNP 0012.scaffold00044 43494 1 T A scaffold44345 ScafM SNP 0012.scaffold00044 43629 1 T G scaffold44345 ScafM SNP 0012.scaffold00044 43736 1 G T scaffold44345 ReadM SNP 0013.scaffold00046 413 1 C T - ReadM SNP 0013.scaffold00046 446 1 A G - Both SNP 0013.scaffold00046 460 1 T C scaffold4871 ScafM INDEL 0013.scaffold00046 513 4 .... ATTC scaffold4871 Both SNP 0013.scaffold00046 574 1 A G scaffold4871 ReadM SNP 0013.scaffold00046 676 1 G T - ReadM SNP 0013.scaffold00046 731 1 G A - ReadM SNP 0013.scaffold00046 915 1 G A - Both SNP 0013.scaffold00046 1005 1 G A scaffold4871 ReadM SNP 0013.scaffold00046 1111 1 G C - ReadM SNP 0013.scaffold00046 1243 1 C T - ReadM SNP 0013.scaffold00046 1255 1 A C - ReadM SNP 0013.scaffold00046 1267 1 C T - ReadM SNP 0013.scaffold00046 1432 1 T C - ReadM SNP 0013.scaffold00046 1528 1 A G - ReadM SNP 0013.scaffold00046 1546 1 A G - ReadM SNP 0013.scaffold00046 1569 1 T A - ReadM SNP 0013.scaffold00046 1612 1 T C - ReadM SNP 0013.scaffold00046 1621 1 A G - ReadM SNP 0013.scaffold00046 1801 1 T C - ReadM SNP 0013.scaffold00046 1875 1 C T - ReadM SNP 0013.scaffold00046 1956 1 T G - ReadM SNP 0013.scaffold00046 1997 1 C T - ReadM SNP 0013.scaffold00046 2018 1 A G - ReadM SNP 0013.scaffold00046 2036 1 C T - ReadM INDEL 0013.scaffold00046 2171 2 AC .. - ReadM SNP 0013.scaffold00046 2262 1 C T - ReadM SNP 0013.scaffold00046 2276 1 C T - ReadM SNP 0013.scaffold00046 2338 1 G A - ReadM SNP 0013.scaffold00046 2352 1 G A - ReadM SNP 0013.scaffold00046 2477 1 A G - ReadM SNP 0013.scaffold00046 2489 1 G A - ReadM SNP 0013.scaffold00046 2543 1 G T - ReadM SNP 0013.scaffold00046 2584 1 G A - ReadM SNP 0013.scaffold00046 3136 1 T C - ReadM SNP 0013.scaffold00046 3155 1 G T - ReadM SNP 0013.scaffold00046 3254 1 A G - ReadM SNP 0013.scaffold00046 3417 1 G C - ReadM SNP 0013.scaffold00046 3620 1 C A - ReadM INDEL 0013.scaffold00046 3763 1 T . - ReadM SNP 0013.scaffold00046 3876 1 A G - ReadM SNP 0013.scaffold00046 3969 1 T C - ReadM SNP 0013.scaffold00046 4125 1 A G - ReadM SNP 0013.scaffold00046 4133 1 G T - ReadM SNP 0013.scaffold00046 4777 1 T C - ReadM INDEL 0013.scaffold00046 4794 1 G . - Both SNP 0013.scaffold00046 9850 1 G A scaffold17586 Both SNP 0013.scaffold00046 9919 1 C G scaffold17586 ReadM SNP 0013.scaffold00046 10591 1 A T - ScafM SNP 0013.scaffold00046 10690 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 10764 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 10832 1 T C scaffold17586 ScafM INDEL 0013.scaffold00046 11120 2 AA .C scaffold17586 ScafM SNP 0013.scaffold00046 11492 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 11533 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 11582 1 T C scaffold17586 Both INDEL 0013.scaffold00046 11657 1 . A scaffold17586 Both SNP 0013.scaffold00046 11751 1 C T scaffold17586 Both SNP 0013.scaffold00046 11753 1 A G scaffold17586 Both SNP 0013.scaffold00046 11904 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 11978 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 12139 1 A T scaffold17586 Both SNP 0013.scaffold00046 12455 1 C G scaffold17586 Both SNP 0013.scaffold00046 12505 1 A C scaffold17586 Both SNP 0013.scaffold00046 12754 1 C T scaffold17586 Both SNP 0013.scaffold00046 12773 1 T C scaffold17586 Both SNP 0013.scaffold00046 12916 1 C T scaffold17586 Both SNP 0013.scaffold00046 12935 1 A G scaffold17586 Both INDEL 0013.scaffold00046 12941 1 . T scaffold17586 Both SNP 0013.scaffold00046 12989 1 T C scaffold17586 Both SNP 0013.scaffold00046 12998 1 G A scaffold17586 Both INDEL 0013.scaffold00046 13043 1 . T scaffold17586 Both SNP 0013.scaffold00046 13117 1 G A scaffold17586 Both SNP 0013.scaffold00046 13146 1 C T scaffold17586 Both SNP 0013.scaffold00046 13186 1 A C scaffold17586 Both SNP 0013.scaffold00046 13319 1 C T scaffold17586 Both INDEL 0013.scaffold00046 13320 1 . G scaffold17586 Both SNP 0013.scaffold00046 13344 1 G A scaffold17586 ReadM SNP 0013.scaffold00046 13484 1 A G - ReadM SNP 0013.scaffold00046 13513 1 C T - ReadM SNP 0013.scaffold00046 13717 1 A G - ReadM SNP 0013.scaffold00046 13752 1 G A - ReadM SNP 0013.scaffold00046 13793 1 C T - ReadM SNP 0013.scaffold00046 13796 1 T C - ReadM SNP 0013.scaffold00046 13896 1 G A - ReadM SNP 0013.scaffold00046 13947 1 A G - ReadM SNP 0013.scaffold00046 13988 1 C G - ReadM SNP 0013.scaffold00046 14058 1 A G - ReadM SNP 0013.scaffold00046 14187 1 G A - Both SNP 0013.scaffold00046 14241 1 A G scaffold17586 Both SNP 0013.scaffold00046 14271 1 A C scaffold17586 Both SNP 0013.scaffold00046 14390 1 C T scaffold17586 Both SNP 0013.scaffold00046 14437 1 A G scaffold17586 Both SNP 0013.scaffold00046 14650 1 A G scaffold17586 Both SNP 0013.scaffold00046 14680 1 T C scaffold17586 Both SNP 0013.scaffold00046 14846 1 T G scaffold17586 ReadM SNP 0013.scaffold00046 14982 1 T A - ReadM SNP 0013.scaffold00046 14987 1 T A - ReadM SNP 0013.scaffold00046 15081 1 C A - ReadM INDEL 0013.scaffold00046 15128 1 C . - ScafM SNP 0013.scaffold00046 15171 1 C T scaffold17586 Both SNP 0013.scaffold00046 15335 1 T A scaffold17586 Both SNP 0013.scaffold00046 15407 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 15551 1 C T scaffold17586 ReadM SNP 0013.scaffold00046 20140 1 A G - ReadM SNP 0013.scaffold00046 20224 1 T C - ReadM SNP 0013.scaffold00046 20297 1 A T - Both SNP 0013.scaffold00046 20526 1 A T scaffold31739 Both SNP 0013.scaffold00046 20547 1 G C scaffold31739 Both SNP 0013.scaffold00046 20616 1 T C scaffold31739 ReadM SNP 0013.scaffold00046 20679 1 C A - ReadM SNP 0013.scaffold00046 20732 1 T G - ReadM SNP 0013.scaffold00046 20843 1 A T - ReadM SNP 0013.scaffold00046 20914 1 G T - ReadM SNP 0013.scaffold00046 20960 1 C G - ReadM SNP 0013.scaffold00046 21191 1 C A - ReadM SNP 0013.scaffold00046 21257 1 C G - ReadM SNP 0013.scaffold00046 21264 1 A C - ReadM SNP 0013.scaffold00046 21531 1 G T - ReadM SNP 0013.scaffold00046 21582 1 A G - ReadM SNP 0013.scaffold00046 21585 1 A G - ReadM SNP 0013.scaffold00046 21638 1 A G - ReadM SNP 0013.scaffold00046 21872 1 A G - ReadM SNP 0013.scaffold00046 22047 1 T G - ScafM INDEL 0013.scaffold00046 22256 1 . T scaffold31739 ScafM SNP 0013.scaffold00046 22301 1 G A scaffold31739 ScafM SNP 0013.scaffold00046 22339 1 C A scaffold31739 ScafM INDEL 0013.scaffold00046 22367 1 T . scaffold31739 ScafM INDEL 0013.scaffold00046 22380 1 . A scaffold31739 ScafM SNP 0013.scaffold00046 22402 1 T C scaffold31739 ScafM SNP 0013.scaffold00046 23182 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 23185 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 23197 1 A G scaffold17586 ScafM INDEL 0013.scaffold00046 23219 3 AAC ... scaffold17586 Both SNP 0013.scaffold00046 23425 1 C T scaffold17586 Both SNP 0013.scaffold00046 23430 1 C T scaffold17586 Both SNP 0013.scaffold00046 23446 1 A C scaffold17586 Both SNP 0013.scaffold00046 23521 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 23665 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 23751 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 23992 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 24002 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24007 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 24017 1 A T scaffold17586 Both INDEL 0013.scaffold00046 24068 1 . T scaffold17586 Both SNP 0013.scaffold00046 24078 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 24134 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24159 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 24174 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 24222 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24229 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24274 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 24280 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24300 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 24326 1 C T scaffold17586 Both SNP 0013.scaffold00046 24620 1 G A scaffold17586 ReadM SNP 0013.scaffold00046 24733 1 T C - ScafM SNP 0013.scaffold00046 24842 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 24852 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 24875 1 G A scaffold17586 ScafM INDEL 0013.scaffold00046 24911 2 AA .. scaffold17586 ScafM SNP 0013.scaffold00046 24922 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 24928 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 24935 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 24972 1 T G scaffold17586 Both SNP 0013.scaffold00046 25148 1 T A scaffold17586 Both SNP 0013.scaffold00046 25216 1 A G scaffold17586 Both SNP 0013.scaffold00046 25252 1 T A scaffold17586 Both SNP 0013.scaffold00046 25369 1 A G scaffold17586 Both SNP 0013.scaffold00046 25395 1 C A scaffold17586 Both SNP 0013.scaffold00046 25435 1 C T scaffold17586 Both SNP 0013.scaffold00046 25900 1 C A scaffold17586 Both SNP 0013.scaffold00046 26132 1 T A scaffold17586 Both SNP 0013.scaffold00046 26137 1 T C scaffold17586 Both SNP 0013.scaffold00046 26327 1 T C scaffold17586 Both INDEL 0013.scaffold00046 26356 1 . C scaffold17586 ScafM SNP 0013.scaffold00046 26361 1 T A scaffold17586 ScafM SNP 0013.scaffold00046 26459 1 G A scaffold17586 ScafM INDEL 0013.scaffold00046 26462 2 .. TA scaffold17586 ScafM INDEL 0013.scaffold00046 26464 1 . A scaffold17586 ScafM SNP 0013.scaffold00046 26473 1 A G scaffold17586 Both SNP 0013.scaffold00046 26666 1 T A scaffold17586 Both SNP 0013.scaffold00046 26794 1 T A scaffold17586 Both SNP 0013.scaffold00046 26814 1 A G scaffold17586 Both SNP 0013.scaffold00046 26864 1 G A scaffold17586 Both SNP 0013.scaffold00046 26994 1 T G scaffold17586 Both SNP 0013.scaffold00046 27592 1 C T scaffold17586 Both INDEL 0013.scaffold00046 27600 1 T . scaffold17586 Both SNP 0013.scaffold00046 27667 1 G A scaffold17586 Both SNP 0013.scaffold00046 27713 1 C T scaffold17586 Both SNP 0013.scaffold00046 27824 1 G A scaffold17586 Both SNP 0013.scaffold00046 27930 1 T C scaffold17586 Both SNP 0013.scaffold00046 28080 1 A G scaffold17586 Both SNP 0013.scaffold00046 28132 1 G A scaffold17586 Both SNP 0013.scaffold00046 28271 1 T A scaffold17586 Both SNP 0013.scaffold00046 28446 1 C T scaffold17586 Both SNP 0013.scaffold00046 28485 1 G A scaffold17586 Both SNP 0013.scaffold00046 28517 1 C A scaffold17586 Both SNP 0013.scaffold00046 28626 1 T C scaffold17586 Both SNP 0013.scaffold00046 28743 1 T C scaffold17586 Both SNP 0013.scaffold00046 28781 1 G A scaffold17586 Both INDEL 0013.scaffold00046 28857 1 . A scaffold17586 Both SNP 0013.scaffold00046 28866 1 G A scaffold17586 Both SNP 0013.scaffold00046 28895 1 A T scaffold17586 Both INDEL 0013.scaffold00046 28906 1 . G scaffold17586 Both SNP 0013.scaffold00046 29022 1 G T scaffold17586 Both SNP 0013.scaffold00046 29164 1 C A scaffold17586 Both SNP 0013.scaffold00046 29198 1 C G scaffold17586 Both SNP 0013.scaffold00046 29202 1 C T scaffold17586 Both SNP 0013.scaffold00046 29271 1 T G scaffold17586 Both SNP 0013.scaffold00046 29664 1 A G scaffold17586 Both SNP 0013.scaffold00046 29794 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 29796 1 A G scaffold17586 ScafM INDEL 0013.scaffold00046 29839 1 . T scaffold17586 ScafM SNP 0013.scaffold00046 31134 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 31606 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 31824 1 A T scaffold17586 Both SNP 0013.scaffold00046 31925 1 C T scaffold17586 ScafM INDEL 0013.scaffold00046 32054 11 ........... GGGTCATGGGT scaffold17586 ScafM SNP 0013.scaffold00046 32066 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 32073 1 C G scaffold17586 ScafM SNP 0013.scaffold00046 32082 1 T A scaffold17586 ScafM INDEL 0013.scaffold00046 32218 2 .. TT scaffold17586 ScafM INDEL 0013.scaffold00046 32220 1 . G scaffold17586 ScafM INDEL 0013.scaffold00046 32223 25 ......................... TCTGGTAGGTGGAGTTACTTTGTTT scaffold17586 ScafM INDEL 0013.scaffold00046 32226 5 ..... TGAAA scaffold17586 Both SNP 0013.scaffold00046 32291 1 C T scaffold17586 Both SNP 0013.scaffold00046 32367 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 32401 1 T A scaffold17586 ScafM INDEL 0013.scaffold00046 32424 2 .. TA scaffold17586 ScafM SNP 0013.scaffold00046 32444 1 A C scaffold17586 Both SNP 0013.scaffold00046 32488 1 T C scaffold17586 Both SNP 0013.scaffold00046 32518 1 T C scaffold17586 ScafM INDEL 0013.scaffold00046 32569 2 TT .. scaffold17586 Both INDEL 0013.scaffold00046 32582 1 . G scaffold17586 Both SNP 0013.scaffold00046 32742 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 32853 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 32880 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 32912 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 32915 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 32958 2 GA AT scaffold17586 Both SNP 0013.scaffold00046 33070 1 A C scaffold17586 Both SNP 0013.scaffold00046 33149 1 T G scaffold17586 Both SNP 0013.scaffold00046 33609 1 A T scaffold17586 Both SNP 0013.scaffold00046 33675 1 G T scaffold17586 Both SNP 0013.scaffold00046 33716 1 G A scaffold17586 ScafM INDEL 0013.scaffold00046 33806 8 ........ CCTTGCCT scaffold17586 Both SNP 0013.scaffold00046 33874 1 T C scaffold17586 Both SNP 0013.scaffold00046 33951 1 T C scaffold17586 Both SNP 0013.scaffold00046 34017 1 C T scaffold17586 Both SNP 0013.scaffold00046 34124 1 G A scaffold17586 Both SNP 0013.scaffold00046 34129 1 A G scaffold17586 ReadM SNP 0013.scaffold00046 34231 1 C T - ReadM SNP 0013.scaffold00046 34233 1 A G - Both SNP 0013.scaffold00046 34449 1 G C scaffold17586 Both SNP 0013.scaffold00046 34814 1 G T scaffold17586 ScafM INDEL 0013.scaffold00046 35038 8 CCATTTGA ........ scaffold17586 ScafM INDEL 0013.scaffold00046 35084 1 G . scaffold17586 ScafM SNP 0013.scaffold00046 35113 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 35125 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 35140 1 A G scaffold17586 ScafM INDEL 0013.scaffold00046 35221 1 . T scaffold17586 ScafM SNP 0013.scaffold00046 35235 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 35239 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 35247 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 35256 1 T A scaffold17586 ScafM SNP 0013.scaffold00046 35308 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 35349 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 35378 2 CC TG scaffold17586 ScafM INDEL 0013.scaffold00046 35389 2 .. TT scaffold17586 ScafM SNP 0013.scaffold00046 35396 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 35402 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 35404 1 G T scaffold17586 ScafM INDEL 0013.scaffold00046 35406 1 A . scaffold17586 ScafM SNP 0013.scaffold00046 35409 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 35413 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 35424 1 T G scaffold17586 ScafM SNP 0013.scaffold00046 35445 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 35448 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 35459 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 35463 2 TT CG scaffold17586 ScafM SNP 0013.scaffold00046 35471 2 TA GG scaffold17586 ScafM SNP 0013.scaffold00046 35485 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 35490 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 35516 2 GG CT scaffold17586 ScafM SNP 0013.scaffold00046 35545 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 35562 1 A G scaffold17586 ScafM INDEL 0013.scaffold00046 35573 2 .. CA scaffold17586 ScafM INDEL 0013.scaffold00046 35574 2 .G TT scaffold17586 ScafM INDEL 0013.scaffold00046 35579 4 .... CTAT scaffold17586 ScafM INDEL 0013.scaffold00046 35582 1 . G scaffold17586 ScafM SNP 0013.scaffold00046 35596 1 T G scaffold17586 ScafM SNP 0013.scaffold00046 35606 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 35608 2 TT CC scaffold17586 ScafM SNP 0013.scaffold00046 35612 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 35640 1 T G scaffold17586 ScafM SNP 0013.scaffold00046 35646 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 35652 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 35654 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 35662 2 GA AG scaffold17586 ScafM SNP 0013.scaffold00046 35670 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 35680 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 37387 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 37392 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 37401 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 37445 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 37456 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 37463 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 37475 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 37480 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 37486 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 37505 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 37535 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 37538 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 37954 2 TC AT scaffold17586 ScafM SNP 0013.scaffold00046 40493 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 40507 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 40523 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 40539 1 G C scaffold17586 ScafM INDEL 0013.scaffold00046 40574 3 TAC ... scaffold17586 ScafM SNP 0013.scaffold00046 40599 1 T A scaffold17586 ScafM SNP 0013.scaffold00046 40611 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 40667 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40669 1 T G scaffold17586 ScafM SNP 0013.scaffold00046 40674 2 CG GT scaffold17586 ScafM SNP 0013.scaffold00046 40679 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40715 2 AA TG scaffold17586 ScafM SNP 0013.scaffold00046 40723 1 C T scaffold17586 ScafM INDEL 0013.scaffold00046 40727 3 ... ATT scaffold17586 ScafM SNP 0013.scaffold00046 40728 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 40732 2 AG GA scaffold17586 ScafM INDEL 0013.scaffold00046 40744 8 ........ AGGTCGTG scaffold17586 ScafM INDEL 0013.scaffold00046 40745 2 .. CA scaffold17586 ScafM SNP 0013.scaffold00046 40767 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40775 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40783 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 40792 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 40798 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 40819 1 C G scaffold17586 ScafM SNP 0013.scaffold00046 40835 1 T G scaffold17586 ScafM SNP 0013.scaffold00046 40848 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 40858 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 40891 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40893 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 40901 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 40906 1 C G scaffold17586 ScafM SNP 0013.scaffold00046 40940 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 40956 1 T G scaffold17586 ScafM INDEL 0013.scaffold00046 40961 1 T . scaffold17586 ScafM SNP 0013.scaffold00046 41004 1 C G scaffold17586 ScafM SNP 0013.scaffold00046 41019 1 A G scaffold17586 ScafM INDEL 0013.scaffold00046 41025 1 C . scaffold17586 ScafM SNP 0013.scaffold00046 41027 2 GT AC scaffold17586 ScafM SNP 0013.scaffold00046 41034 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 41048 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 41091 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 41104 1 T A scaffold17586 ScafM SNP 0013.scaffold00046 41106 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 41121 1 C A scaffold17586 ScafM INDEL 0013.scaffold00046 41127 1 . T scaffold17586 ScafM SNP 0013.scaffold00046 41148 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 41175 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 41197 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 41250 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 41254 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 41267 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 41278 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 41286 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 41317 1 T A scaffold17586 ScafM INDEL 0013.scaffold00046 41320 2 TT .. scaffold17586 ScafM INDEL 0013.scaffold00046 41350 2 .. AA scaffold17586 ScafM SNP 0013.scaffold00046 41355 1 T C scaffold17586 ReadM SNP 0013.scaffold00046 41420 1 C T - ScafM SNP 0013.scaffold00046 41486 1 A G scaffold17586 ScafM SNP 0013.scaffold00046 41500 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 41553 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 41559 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 41577 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 41624 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 41630 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 41654 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 41662 1 C A scaffold17586 ScafM SNP 0013.scaffold00046 41670 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 41681 1 G C scaffold17586 ScafM SNP 0013.scaffold00046 41685 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 41699 2 AT GC scaffold17586 ScafM SNP 0013.scaffold00046 41702 1 G A scaffold17586 ScafM SNP 0013.scaffold00046 41709 1 C T scaffold17586 ScafM SNP 0013.scaffold00046 41731 1 T C scaffold17586 ScafM SNP 0013.scaffold00046 41764 1 C T scaffold17586 ScafM INDEL 0013.scaffold00046 41766 5 ..... GATTG scaffold17586 ScafM INDEL 0013.scaffold00046 41777 4 .... ATTT scaffold17586 ScafM INDEL 0013.scaffold00046 41790 1 T . scaffold17586 ScafM SNP 0013.scaffold00046 41797 1 A C scaffold17586 ScafM SNP 0013.scaffold00046 41815 1 A T scaffold17586 ScafM SNP 0013.scaffold00046 41819 1 G T scaffold17586 ScafM SNP 0013.scaffold00046 41826 2 CA AG scaffold17586 ScafM INDEL 0013.scaffold00046 41836 1 . A scaffold17586 ScafM INDEL 0014.scaffold00049 5000 10 .......... ATCCTCACCT scaffold6443 ScafM SNP 0014.scaffold00049 5022 1 A G scaffold6443 ScafM SNP 0014.scaffold00049 5100 1 T C scaffold6443 ScafM SNP 0014.scaffold00049 5122 1 C T scaffold6443 ScafM SNP 0014.scaffold00049 5173 1 C T scaffold6443 ScafM SNP 0014.scaffold00049 5229 1 A G scaffold6443 ScafM SNP 0014.scaffold00049 5241 1 C A scaffold6443 ScafM SNP 0014.scaffold00049 5253 1 T G scaffold6443 ScafM SNP 0014.scaffold00049 5280 1 G A scaffold6443 ScafM SNP 0014.scaffold00049 5290 1 T A scaffold6443 ScafM SNP 0014.scaffold00049 5330 1 G A scaffold6443 ReadM SNP 0014.scaffold00049 26015 1 G A - ReadM SNP 0014.scaffold00049 32507 1 T G - Both SNP 0014.scaffold00049 38149 1 A G scaffold15694 ReadM INDEL 0014.scaffold00049 39414 1 . T - ScafM SNP 0014.scaffold00049 60410 1 A T scaffold15694 ScafM INDEL 0014.scaffold00049 64559 1 . C scaffold15694 Both SNP 0014.scaffold00049 72142 1 A G scaffold15694 ScafM SNP 0014.scaffold00049 92233 1 A T scaffold15118 ScafM SNP 0014.scaffold00049 92237 1 T C scaffold15118 ScafM SNP 0014.scaffold00049 92308 1 C G scaffold15118 ScafM SNP 0014.scaffold00049 92416 1 C T scaffold15118 ScafM SNP 0014.scaffold00049 92430 1 T G scaffold15118 ScafM SNP 0014.scaffold00049 92450 1 G A scaffold15118 ScafM SNP 0014.scaffold00049 92469 1 A T scaffold15118 ScafM SNP 0014.scaffold00049 92495 1 T G scaffold15118 ScafM SNP 0014.scaffold00049 92657 1 A G scaffold15118 ScafM SNP 0014.scaffold00049 92681 2 AC CT scaffold15118 ScafM SNP 0014.scaffold00049 92725 1 T C scaffold15118 ScafM SNP 0014.scaffold00049 92747 1 A G scaffold15118 ScafM SNP 0014.scaffold00049 92773 1 C T scaffold15118 ScafM SNP 0014.scaffold00049 92776 1 G A scaffold15118 ScafM SNP 0014.scaffold00049 92784 1 T C scaffold15118 ReadM SNP 0014.scaffold00049 102668 1 T C - ScafM INDEL 0014.scaffold00049 110488 19 ................... TTTTCTAAAAAGTATTTCG scaffold1411 ReadM INDEL 0014.scaffold00049 112641 1 . T - ScafM INDEL 0014.scaffold00049 123947 1 . T scaffold1411 ScafM SNP 0014.scaffold00049 129007 1 A C scaffold8822 ScafM INDEL 0014.scaffold00049 129025 1 C . scaffold8822 ScafM SNP 0014.scaffold00049 129028 1 C T scaffold8822 ScafM SNP 0014.scaffold00049 129046 1 C T scaffold8822 ScafM SNP 0014.scaffold00049 129051 1 G C scaffold8822 ScafM SNP 0014.scaffold00049 129061 1 C T scaffold8822 ScafM SNP 0014.scaffold00049 129082 1 A G scaffold8822 ScafM SNP 0014.scaffold00049 129086 1 G T scaffold8822 ScafM SNP 0014.scaffold00049 129119 1 T A scaffold8822 ScafM SNP 0014.scaffold00049 129129 1 G A scaffold8822 ScafM SNP 0014.scaffold00049 129177 1 C T scaffold8822 ScafM SNP 0014.scaffold00049 129195 1 G A scaffold8822 ScafM SNP 0014.scaffold00049 129207 1 A C scaffold8822 ScafM SNP 0014.scaffold00049 129219 1 T A scaffold8822 ScafM SNP 0014.scaffold00049 129228 1 C G scaffold8822 ScafM SNP 0014.scaffold00049 129273 1 T C scaffold8822 ScafM SNP 0014.scaffold00049 129275 1 G A scaffold8822 ScafM SNP 0014.scaffold00049 129289 1 T C scaffold8822 ScafM SNP 0014.scaffold00049 129346 1 G T scaffold8822 ScafM SNP 0014.scaffold00049 129362 1 A C scaffold8822 ScafM INDEL 0014.scaffold00049 129379 3 ... ATA scaffold8822 ScafM SNP 0014.scaffold00049 129580 1 C G scaffold1411 ScafM SNP 0014.scaffold00049 133474 1 T C scaffold1411 ScafM SNP 0014.scaffold00049 133506 1 T G scaffold1411 Both SNP 0014.scaffold00049 136431 1 G T scaffold1411 ScafM SNP 0014.scaffold00049 184534 2 CT AC scaffold15794 ReadM SNP 0014.scaffold00049 194722 1 T C - ReadM SNP 0014.scaffold00049 194725 1 G A - ScafM INDEL 0014.scaffold00049 215255 21 ..................... CCCCCCCCCCCCCCCCCCCCC scaffold594 ScafM SNP 0014.scaffold00049 223610 1 A C scaffold3644 ScafM SNP 0014.scaffold00049 223663 1 G C scaffold3644 ScafM SNP 0014.scaffold00049 223670 1 G C scaffold3644 ScafM SNP 0014.scaffold00049 223710 1 C A scaffold3644 ScafM SNP 0014.scaffold00049 223723 1 A C scaffold3644 ScafM SNP 0014.scaffold00049 223742 1 T C scaffold3644 ScafM INDEL 0014.scaffold00049 223764 3 ATT ... scaffold3644 ScafM SNP 0014.scaffold00049 223794 1 C T scaffold3644 ScafM SNP 0014.scaffold00049 223832 1 T C scaffold3644 ScafM SNP 0014.scaffold00049 223835 1 T C scaffold3644 ScafM SNP 0014.scaffold00049 223879 1 G A scaffold3644 ScafM SNP 0014.scaffold00049 223884 1 T C scaffold3644 ScafM SNP 0014.scaffold00049 223910 1 C T scaffold3644 ScafM SNP 0014.scaffold00049 236709 1 C T scaffold594 ScafM SNP 0014.scaffold00049 236717 1 T C scaffold594 ScafM INDEL 0014.scaffold00049 237072 2 .. AA scaffold594 ScafM SNP 0014.scaffold00049 237110 1 G A scaffold594 ScafM SNP 0015.scaffold00050 8147 1 A C scaffold24636 ScafM SNP 0015.scaffold00050 8636 2 TA AT scaffold24636 ReadM SNP 0015.scaffold00050 19297 1 A G - ScafM INDEL 0015.scaffold00050 52739 1 A . scaffold7368 ScafM SNP 0015.scaffold00050 53101 1 T G scaffold1837 ScafM SNP 0015.scaffold00050 53123 1 T C scaffold1837 ScafM SNP 0015.scaffold00050 53230 1 A C scaffold1837 ScafM SNP 0015.scaffold00050 53252 1 G C scaffold1837 ScafM SNP 0015.scaffold00050 53267 1 G A scaffold1837 ScafM SNP 0015.scaffold00050 53282 1 G A scaffold1837 ScafM SNP 0015.scaffold00050 53293 1 G A scaffold1837 ScafM SNP 0015.scaffold00050 53321 1 T C scaffold1837 ScafM SNP 0015.scaffold00050 53324 1 G A scaffold1837 ScafM SNP 0015.scaffold00050 124275 1 T C scaffold14112 ScafM SNP 0015.scaffold00050 124282 1 T G scaffold14112 ScafM SNP 0015.scaffold00050 124346 1 C T scaffold14112 ScafM SNP 0015.scaffold00050 124449 1 G C scaffold14112 ScafM SNP 0015.scaffold00050 124463 1 A T scaffold14112 ReadM SNP 0015.scaffold00050 141999 1 G C - ReadM SNP 0015.scaffold00050 183332 1 C T - ScafM SNP 0015.scaffold00050 188406 1 G A scaffold1858 ScafM SNP 0015.scaffold00050 188421 2 CT TG scaffold1858 ScafM SNP 0015.scaffold00050 188441 2 CA GG scaffold1858 ScafM INDEL 0015.scaffold00050 233634 2 .. AA scaffold630 ScafM SNP 0015.scaffold00050 234358 1 C A scaffold630 ScafM INDEL 0015.scaffold00050 240666 1 . A scaffold16674 ReadM SNP 0015.scaffold00050 247421 1 T A - ScafM SNP 0015.scaffold00050 248786 1 C A scaffold17316 ScafM SNP 0015.scaffold00050 248805 1 C A scaffold17316 ScafM SNP 0015.scaffold00050 248808 1 T A scaffold17316 ScafM SNP 0015.scaffold00050 249100 1 C T scaffold17316 ScafM INDEL 0015.scaffold00050 253723 1 T . scaffold42942 ScafM INDEL 0015.scaffold00050 268303 1 C . scaffold7541 ScafM SNP 0015.scaffold00050 359808 1 T C scaffold14875 ScafM SNP 0015.scaffold00050 359851 2 TA CT scaffold14875 ScafM SNP 0015.scaffold00050 359858 1 G T scaffold14875 ScafM SNP 0015.scaffold00050 359872 1 G C scaffold14875 ScafM SNP 0015.scaffold00050 359881 1 A G scaffold14875 ScafM SNP 0015.scaffold00050 359915 1 G A scaffold14875 ScafM SNP 0015.scaffold00050 359938 1 A G scaffold14875 ScafM SNP 0015.scaffold00050 359957 1 A G scaffold14875 ScafM INDEL 0015.scaffold00050 359995 1 . A scaffold14875 ScafM SNP 0015.scaffold00050 360006 1 T A scaffold14875 ScafM SNP 0015.scaffold00050 360048 1 C A scaffold14875 ScafM SNP 0015.scaffold00050 360058 1 G T scaffold14875 ScafM SNP 0015.scaffold00050 360139 1 T C scaffold14875 ScafM SNP 0015.scaffold00050 360164 1 G C scaffold14875 ScafM SNP 0015.scaffold00050 362237 1 A G scaffold32408 ScafM SNP 0015.scaffold00050 363153 1 C T scaffold14859 ScafM INDEL 0015.scaffold00050 363196 12 ............ TCAAGTGGGTAA scaffold14859 ScafM SNP 0015.scaffold00050 363203 1 G C scaffold14859 ScafM SNP 0015.scaffold00050 363205 1 G A scaffold14859 ScafM SNP 0015.scaffold00050 363247 1 T A scaffold14859 ScafM SNP 0015.scaffold00050 363284 1 A C scaffold14859 ScafM SNP 0015.scaffold00050 363288 1 G A scaffold14859 ScafM SNP 0015.scaffold00050 363308 1 T C scaffold14859 ScafM SNP 0015.scaffold00050 363349 1 T G scaffold14859 ScafM SNP 0015.scaffold00050 363357 1 A C scaffold14859 ScafM SNP 0015.scaffold00050 363392 1 G A scaffold14859 ScafM SNP 0015.scaffold00050 363410 1 C T scaffold14859 ScafM SNP 0015.scaffold00050 363518 1 G T scaffold14859 ScafM SNP 0015.scaffold00050 363536 1 T C scaffold14859 ScafM SNP 0015.scaffold00050 363589 1 G A scaffold14859 ScafM SNP 0015.scaffold00050 363602 1 G A scaffold14859 ScafM SNP 0015.scaffold00050 363854 1 A T scaffold22393 ScafM SNP 0015.scaffold00050 363889 1 T C scaffold22393 ScafM SNP 0015.scaffold00050 363903 2 TG AA scaffold22393 ScafM SNP 0015.scaffold00050 363911 1 G A scaffold22393 ScafM SNP 0015.scaffold00050 363948 1 T C scaffold22393 ScafM SNP 0015.scaffold00050 363965 1 C T scaffold22393 ScafM SNP 0015.scaffold00050 363979 1 G A scaffold22393 ScafM SNP 0015.scaffold00050 364032 1 A T scaffold22393 ScafM SNP 0015.scaffold00050 364050 1 T C scaffold22393 ScafM INDEL 0015.scaffold00050 364058 1 . G scaffold22393 ScafM INDEL 0015.scaffold00050 364059 2 .. CG scaffold22393 ScafM SNP 0015.scaffold00050 364081 1 T A scaffold22393 ScafM SNP 0015.scaffold00050 364096 1 A G scaffold22393 ScafM INDEL 0015.scaffold00050 364130 1 G . scaffold22393 ScafM SNP 0015.scaffold00050 364152 1 G T scaffold22393 ScafM INDEL 0015.scaffold00050 364153 4 .... TTTT scaffold22393 ScafM SNP 0015.scaffold00050 364167 1 A G scaffold22393 ScafM SNP 0015.scaffold00050 364190 1 G T scaffold22393 ScafM SNP 0015.scaffold00050 364206 1 G C scaffold22393 ScafM INDEL 0015.scaffold00050 364217 1 C . scaffold22393 ScafM INDEL 0015.scaffold00050 364220 1 C . scaffold22393 ScafM INDEL 0015.scaffold00050 364231 1 . T scaffold22393 ScafM SNP 0015.scaffold00050 364319 1 G C scaffold22393 ScafM SNP 0015.scaffold00050 364329 1 A T scaffold22393 ScafM SNP 0015.scaffold00050 364354 1 C T scaffold22393 ScafM SNP 0015.scaffold00050 364382 1 A T scaffold22393 ScafM INDEL 0015.scaffold00050 364429 1 T . scaffold22393 ScafM SNP 0015.scaffold00050 364462 1 T C scaffold22393 ScafM SNP 0015.scaffold00050 364468 1 C T scaffold22393 ScafM SNP 0015.scaffold00050 364483 1 C T scaffold22393 ScafM SNP 0015.scaffold00050 364544 1 C T scaffold22393 ScafM INDEL 0016.scaffold00051 10186 51 ................................................... ATTCCAATGCTAAAAAAGGTGATGTAACTGCCTTAATCTTGTTGAACTTAA scaffold7746 ScafM INDEL 0016.scaffold00051 10870 1 . T scaffold7746 ScafM SNP 0016.scaffold00051 45674 1 A G scaffold540 ScafM INDEL 0016.scaffold00051 45686 1 . T scaffold540 ScafM INDEL 0016.scaffold00051 49570 1 . T scaffold40834 ScafM INDEL 0016.scaffold00051 95094 7 ....... CCCCCCC scaffold14337 ScafM INDEL 0016.scaffold00051 130547 13 ............. CCCCCCCCCCCCC scaffold10017 ScafM INDEL 0016.scaffold00051 151235 1 . A scaffold10017 ScafM SNP 0016.scaffold00051 158106 1 C T scaffold10017 ReadM INDEL 0016.scaffold00051 261617 1 . T - ScafM SNP 0016.scaffold00051 284960 1 T C scaffold3387 ScafM SNP 0016.scaffold00051 285031 1 G T scaffold3387 ScafM INDEL 0016.scaffold00051 285049 1 A . scaffold3387 ScafM INDEL 0016.scaffold00051 295985 46 TGTTTACATTTAGTAAATCCACGTGCACTTTACATATATAAAAATT .............................................. scaffold20110 ScafM INDEL 0016.scaffold00051 324187 14 .............. CGACCCCCCCCCCC scaffold3330 Both INDEL 0016.scaffold00051 325574 1 . T scaffold3330 ScafM SNP 0016.scaffold00051 337377 1 C T scaffold7930 ScafM INDEL 0016.scaffold00051 337406 2 TC .A scaffold7930 ScafM SNP 0016.scaffold00051 337409 2 TA AC scaffold7930 ScafM SNP 0016.scaffold00051 337431 1 C T scaffold7930 ScafM SNP 0016.scaffold00051 337515 1 C T scaffold7930 ScafM SNP 0016.scaffold00051 342458 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342462 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342471 1 A C scaffold18171 ScafM INDEL 0016.scaffold00051 342486 1 . T scaffold18171 ScafM SNP 0016.scaffold00051 342515 2 AT TG scaffold18171 ScafM SNP 0016.scaffold00051 342526 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 342532 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 342534 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342539 1 T A scaffold18171 ScafM SNP 0016.scaffold00051 342569 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342579 1 T A scaffold18171 ScafM SNP 0016.scaffold00051 342582 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 342592 1 C T scaffold18171 ScafM INDEL 0016.scaffold00051 342599 8 ........ GACTGAAA scaffold18171 ScafM SNP 0016.scaffold00051 342619 1 C T scaffold18171 ScafM SNP 0016.scaffold00051 342633 1 C T scaffold18171 ScafM SNP 0016.scaffold00051 342643 1 C T scaffold18171 ScafM SNP 0016.scaffold00051 342657 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342716 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342720 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342743 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 342747 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 342758 1 A T scaffold18171 ScafM SNP 0016.scaffold00051 342791 1 A T scaffold18171 ScafM SNP 0016.scaffold00051 342802 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 342822 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342824 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342829 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342843 1 T G scaffold18171 ScafM SNP 0016.scaffold00051 342845 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342858 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 342863 1 T A scaffold18171 ScafM SNP 0016.scaffold00051 342881 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 342884 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342898 1 G T scaffold18171 ScafM INDEL 0016.scaffold00051 342910 1 . T scaffold18171 ScafM SNP 0016.scaffold00051 342918 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342931 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 342935 1 G T scaffold18171 ScafM SNP 0016.scaffold00051 342939 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 342947 1 C A scaffold18171 ScafM SNP 0016.scaffold00051 342949 2 GT AC scaffold18171 ScafM SNP 0016.scaffold00051 342952 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342954 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342959 1 A T scaffold18171 ScafM SNP 0016.scaffold00051 342964 1 A T scaffold18171 ScafM SNP 0016.scaffold00051 342971 1 G C scaffold18171 ScafM SNP 0016.scaffold00051 342975 1 C A scaffold18171 ScafM SNP 0016.scaffold00051 342982 1 C T scaffold18171 ScafM SNP 0016.scaffold00051 343013 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 343022 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 343036 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 343040 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 343046 1 C A scaffold18171 ScafM SNP 0016.scaffold00051 343068 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 343076 1 A C scaffold18171 ScafM SNP 0016.scaffold00051 343084 1 T C scaffold18171 ScafM SNP 0016.scaffold00051 343087 1 C T scaffold18171 ScafM SNP 0016.scaffold00051 343089 1 T G scaffold18171 ScafM SNP 0016.scaffold00051 343092 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 343098 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 343101 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 343132 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 343135 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 343176 1 G A scaffold18171 ScafM SNP 0016.scaffold00051 343178 1 A G scaffold18171 ScafM SNP 0016.scaffold00051 343205 1 C A scaffold18171 ScafM SNP 0016.scaffold00051 345446 1 T C scaffold2122 ScafM SNP 0016.scaffold00051 345448 1 A G scaffold2122 ScafM SNP 0016.scaffold00051 345460 1 G A scaffold2122 ScafM INDEL 0016.scaffold00051 345485 1 C . scaffold2122 ScafM SNP 0016.scaffold00051 345514 1 A C scaffold2122 ScafM SNP 0016.scaffold00051 345520 2 AA GG scaffold2122 ScafM INDEL 0016.scaffold00051 345531 3 ... TTC scaffold2122 ScafM SNP 0016.scaffold00051 345615 1 G A scaffold2122 ScafM SNP 0016.scaffold00051 345651 1 C T scaffold2122 ScafM SNP 0016.scaffold00051 345656 1 A T scaffold2122 ScafM SNP 0016.scaffold00051 345675 1 A C scaffold2122 ScafM SNP 0016.scaffold00051 399172 1 A T scaffold11029 ScafM INDEL 0016.scaffold00051 399193 1 G . scaffold11029 ScafM SNP 0016.scaffold00051 399210 2 CT TC scaffold11029 ScafM SNP 0016.scaffold00051 399225 1 A G scaffold11029 ScafM INDEL 0016.scaffold00051 399231 3 .TG AAT scaffold11029 ScafM SNP 0016.scaffold00051 399245 1 C T scaffold11029 ScafM SNP 0016.scaffold00051 399251 1 G A scaffold11029 ScafM SNP 0016.scaffold00051 399253 1 C A scaffold11029 ScafM SNP 0016.scaffold00051 399270 1 C T scaffold11029 ScafM SNP 0016.scaffold00051 399275 2 TA CC scaffold11029 ScafM SNP 0016.scaffold00051 399286 1 T C scaffold11029 ScafM SNP 0016.scaffold00051 399292 1 T A scaffold11029 ScafM SNP 0016.scaffold00051 399359 1 T C scaffold11029 ScafM SNP 0016.scaffold00051 399362 1 G T scaffold11029 ScafM INDEL 0016.scaffold00051 405423 4 .... TTTG scaffold11629 ScafM SNP 0016.scaffold00051 419617 1 T C scaffold28788 ScafM SNP 0016.scaffold00051 419622 1 A G scaffold28788 ScafM SNP 0016.scaffold00051 419662 1 A C scaffold28788 ScafM SNP 0016.scaffold00051 419664 1 C T scaffold28788 ScafM SNP 0016.scaffold00051 419674 1 G A scaffold28788 ScafM SNP 0016.scaffold00051 419694 1 A T scaffold28788 ScafM SNP 0016.scaffold00051 419740 1 G T scaffold28788 ScafM INDEL 0016.scaffold00051 435709 1 . A scaffold6418 ScafM SNP 0016.scaffold00051 438748 1 T A scaffold6418 ScafM SNP 0016.scaffold00051 444748 1 C T scaffold6418 ScafM SNP 0016.scaffold00051 446228 1 T G scaffold6418 ScafM SNP 0016.scaffold00051 446235 1 G T scaffold6418 ScafM SNP 0016.scaffold00051 453981 1 T G scaffold6418 ScafM SNP 0016.scaffold00051 461484 1 G T scaffold4399 ScafM SNP 0016.scaffold00051 486919 1 C A scaffold14953 ScafM SNP 0016.scaffold00051 486925 1 T A scaffold14953 ScafM SNP 0016.scaffold00051 486932 1 G A scaffold14953 ScafM SNP 0016.scaffold00051 487033 1 A G scaffold14953 ScafM SNP 0016.scaffold00051 498856 1 A T scaffold16924 ScafM INDEL 0017.scaffold00052 6777 1 . T scaffold5220 ScafM SNP 0017.scaffold00052 6989 1 C T scaffold5220 ScafM SNP 0017.scaffold00052 7410 1 C T scaffold5220 ScafM SNP 0017.scaffold00052 7649 1 G A scaffold5220 ReadM INDEL 0017.scaffold00052 8852 1 G . - ReadM SNP 0017.scaffold00052 9385 1 C T - ReadM SNP 0017.scaffold00052 9726 1 C A - ReadM SNP 0017.scaffold00052 9988 1 T C - ReadM SNP 0017.scaffold00052 10134 1 G C - Both SNP 0017.scaffold00052 10542 1 T C scaffold5220 ScafM SNP 0017.scaffold00052 11070 1 T A scaffold5220 ReadM SNP 0017.scaffold00052 11653 1 G C - ReadM SNP 0017.scaffold00052 11659 1 C T - ScafM SNP 0017.scaffold00052 12828 1 G A scaffold5220 ScafM SNP 0017.scaffold00052 12938 1 T A scaffold5220 ScafM SNP 0017.scaffold00052 12992 1 G A scaffold5220 ScafM SNP 0017.scaffold00052 13022 1 A T scaffold5220 ScafM SNP 0017.scaffold00052 13174 1 C T scaffold5220 ScafM INDEL 0017.scaffold00052 13473 5 ..... AAAAA scaffold5220 ScafM SNP 0017.scaffold00052 13475 1 C A scaffold5220 ScafM INDEL 0017.scaffold00052 13640 1 . A scaffold5220 ReadM SNP 0017.scaffold00052 14116 1 G A - ScafM INDEL 0017.scaffold00052 14234 11 GCTAAATTGGA ........... scaffold5220 ReadM SNP 0017.scaffold00052 14521 1 G A - ReadM SNP 0017.scaffold00052 14684 1 C T - ReadM SNP 0017.scaffold00052 14696 1 T C - ReadM SNP 0017.scaffold00052 15045 1 A G - ReadM SNP 0017.scaffold00052 15060 1 A G - ReadM SNP 0017.scaffold00052 15074 1 G C - ReadM SNP 0017.scaffold00052 15341 1 G A - ReadM SNP 0017.scaffold00052 15579 1 C T - ReadM SNP 0017.scaffold00052 15582 1 C G - ReadM SNP 0017.scaffold00052 15651 1 G T - ReadM SNP 0017.scaffold00052 16087 1 G A - ReadM SNP 0017.scaffold00052 16137 1 T G - ReadM SNP 0017.scaffold00052 16141 1 C T - ReadM SNP 0017.scaffold00052 16160 1 A G - ReadM SNP 0017.scaffold00052 16378 1 A C - Both SNP 0017.scaffold00052 16495 1 A G scaffold5220 ReadM SNP 0017.scaffold00052 17322 1 A G - ReadM SNP 0017.scaffold00052 17419 1 T C - Both SNP 0017.scaffold00052 17505 1 C T scaffold5220 Both SNP 0017.scaffold00052 17614 1 C T scaffold5220 Both SNP 0017.scaffold00052 17620 1 G A scaffold5220 ReadM INDEL 0017.scaffold00052 18263 1 T . - ReadM SNP 0017.scaffold00052 18337 1 C T - Both SNP 0017.scaffold00052 18777 1 T C scaffold5220 ReadM SNP 0017.scaffold00052 18920 1 T C - ReadM SNP 0017.scaffold00052 19014 1 C T - ReadM SNP 0017.scaffold00052 19117 1 G A - ReadM SNP 0017.scaffold00052 19191 1 C T - ReadM SNP 0017.scaffold00052 19259 1 C T - ReadM SNP 0017.scaffold00052 19268 1 T C - ReadM SNP 0017.scaffold00052 19555 1 C T - ReadM SNP 0017.scaffold00052 19959 1 A G - ReadM INDEL 0017.scaffold00052 20041 1 A . - ReadM SNP 0017.scaffold00052 20236 1 G A - ReadM SNP 0017.scaffold00052 20377 1 C T - ReadM SNP 0017.scaffold00052 20475 1 C T - ReadM SNP 0017.scaffold00052 20561 1 C T - ReadM SNP 0017.scaffold00052 21556 1 A G - ReadM SNP 0017.scaffold00052 21747 1 A G - ReadM SNP 0017.scaffold00052 22336 1 G A - ReadM SNP 0017.scaffold00052 22365 1 A C - ReadM SNP 0017.scaffold00052 22693 1 A G - ReadM SNP 0017.scaffold00052 23062 1 C T - Both SNP 0017.scaffold00052 23200 1 C T scaffold5220 ReadM SNP 0017.scaffold00052 23290 1 C G - ReadM SNP 0017.scaffold00052 23307 1 G A - ReadM SNP 0017.scaffold00052 23605 1 G A - ScafM SNP 0017.scaffold00052 23659 1 A G scaffold5220 ReadM INDEL 0017.scaffold00052 25651 3 ... ACA - ReadM SNP 0017.scaffold00052 26018 1 G A - ReadM SNP 0017.scaffold00052 26152 1 G A - ReadM SNP 0017.scaffold00052 26250 1 G A - Both SNP 0017.scaffold00052 26393 1 G C scaffold5220 Both SNP 0017.scaffold00052 26553 1 T C scaffold5220 Both SNP 0017.scaffold00052 26653 1 T C scaffold5220 ReadM SNP 0017.scaffold00052 26930 1 G A - ReadM SNP 0017.scaffold00052 27074 1 A T - ReadM SNP 0017.scaffold00052 27314 1 C A - ReadM SNP 0017.scaffold00052 27580 1 C T - ReadM SNP 0017.scaffold00052 27643 1 C T - ReadM SNP 0017.scaffold00052 27835 1 T C - ReadM SNP 0017.scaffold00052 28232 1 G A - ReadM SNP 0017.scaffold00052 28234 1 T C - ReadM SNP 0017.scaffold00052 28333 1 C T - ReadM SNP 0017.scaffold00052 28574 1 T C - ReadM INDEL 0017.scaffold00052 28952 3 AAA ... - ReadM SNP 0017.scaffold00052 29112 1 G A - ReadM SNP 0017.scaffold00052 29118 1 T C - ReadM SNP 0017.scaffold00052 29775 1 G A - ReadM SNP 0017.scaffold00052 29800 1 A G - ReadM SNP 0017.scaffold00052 30106 1 A C - ReadM SNP 0017.scaffold00052 30167 1 T C - ReadM SNP 0017.scaffold00052 30268 1 G A - ReadM SNP 0017.scaffold00052 30465 1 C T - ReadM SNP 0017.scaffold00052 31611 1 A G - ReadM SNP 0017.scaffold00052 31646 1 T C - ScafM INDEL 0017.scaffold00052 44678 3 ... AAA scaffold32814 ScafM SNP 0017.scaffold00052 44936 1 A G scaffold32814 ScafM SNP 0017.scaffold00052 45151 1 T A scaffold32814 ReadM SNP 0017.scaffold00052 48056 1 G A - ReadM SNP 0017.scaffold00052 48903 1 C T - Both SNP 0017.scaffold00052 49001 1 T C scaffold32814 ScafM INDEL 0017.scaffold00052 49355 2 TT .. scaffold32814 ScafM SNP 0017.scaffold00052 50446 1 T C scaffold3635 ScafM INDEL 0017.scaffold00052 50532 1 . T scaffold3635 Both SNP 0017.scaffold00052 51093 1 A G scaffold3635 Both SNP 0017.scaffold00052 51242 1 C T scaffold3635 ReadM SNP 0017.scaffold00052 51440 1 G C - ReadM SNP 0017.scaffold00052 51698 1 C T - ReadM SNP 0017.scaffold00052 52417 1 T C - ReadM SNP 0017.scaffold00052 52436 1 T C - ReadM SNP 0017.scaffold00052 52499 1 G T - ReadM SNP 0017.scaffold00052 52714 1 G A - ReadM SNP 0017.scaffold00052 53316 1 A C - ReadM SNP 0017.scaffold00052 53689 1 A G - ReadM SNP 0017.scaffold00052 53810 1 A G - ReadM SNP 0017.scaffold00052 54275 1 G C - ReadM SNP 0017.scaffold00052 54472 1 A C - ReadM SNP 0017.scaffold00052 54599 1 T A - ReadM SNP 0017.scaffold00052 54950 1 A G - ReadM SNP 0017.scaffold00052 56327 1 G A - ReadM SNP 0017.scaffold00052 56504 1 A G - ReadM SNP 0017.scaffold00052 56934 1 G A - ReadM SNP 0017.scaffold00052 57635 1 T C - ReadM SNP 0017.scaffold00052 58101 1 T C - ReadM SNP 0017.scaffold00052 58947 1 G T - ReadM SNP 0017.scaffold00052 59076 1 G A - ReadM SNP 0017.scaffold00052 59335 1 G A - ReadM SNP 0017.scaffold00052 59378 1 T A - ReadM SNP 0017.scaffold00052 59513 1 G T - ReadM SNP 0017.scaffold00052 59958 1 C T - ReadM SNP 0017.scaffold00052 60327 1 T C - ReadM SNP 0017.scaffold00052 60330 1 T C - ReadM SNP 0017.scaffold00052 60525 1 G C - Both SNP 0017.scaffold00052 61190 1 T C scaffold3635 Both SNP 0017.scaffold00052 61273 1 C T scaffold3635 Both SNP 0017.scaffold00052 61282 1 A G scaffold3635 Both SNP 0017.scaffold00052 61330 1 C A scaffold3635 Both SNP 0017.scaffold00052 61558 1 C T scaffold3635 Both INDEL 0017.scaffold00052 61812 1 . T scaffold3635 ReadM SNP 0017.scaffold00052 62030 1 A G - ReadM SNP 0017.scaffold00052 63684 1 A G - ReadM SNP 0017.scaffold00052 63957 1 T C - Both SNP 0017.scaffold00052 64039 1 G A scaffold3635 Both SNP 0017.scaffold00052 64146 1 A G scaffold3635 ReadM SNP 0017.scaffold00052 66267 1 A C - ReadM SNP 0017.scaffold00052 66339 1 T A - ReadM INDEL 0017.scaffold00052 66375 1 G . - ReadM SNP 0017.scaffold00052 66609 1 G T - ReadM SNP 0017.scaffold00052 66617 1 C T - ReadM SNP 0017.scaffold00052 66984 1 A G - ReadM SNP 0017.scaffold00052 67426 1 T G - ReadM SNP 0017.scaffold00052 67472 1 T C - ReadM SNP 0017.scaffold00052 67961 1 G T - ReadM INDEL 0017.scaffold00052 68213 2 .. AG - ReadM SNP 0017.scaffold00052 68976 1 T G - ReadM SNP 0017.scaffold00052 69179 1 T A - ReadM SNP 0017.scaffold00052 69274 1 G C - ReadM INDEL 0017.scaffold00052 69426 1 T . - ReadM SNP 0017.scaffold00052 69675 1 G A - ReadM SNP 0017.scaffold00052 69770 1 A G - ReadM SNP 0017.scaffold00052 70129 1 A C - ReadM SNP 0017.scaffold00052 70776 1 A T - ReadM SNP 0017.scaffold00052 71548 1 A G - ReadM SNP 0017.scaffold00052 71659 1 T C - ReadM SNP 0017.scaffold00052 71808 1 C T - ReadM SNP 0017.scaffold00052 71877 1 G A - ReadM SNP 0017.scaffold00052 72479 1 G T - ReadM SNP 0017.scaffold00052 72491 1 T C - ReadM SNP 0017.scaffold00052 72714 1 C G - ReadM INDEL 0017.scaffold00052 72973 1 A . - ReadM INDEL 0017.scaffold00052 72974 1 T . - ReadM SNP 0017.scaffold00052 73071 1 G A - ReadM SNP 0017.scaffold00052 73298 1 T C - ReadM SNP 0017.scaffold00052 73820 1 C T - ReadM SNP 0017.scaffold00052 74018 1 T C - ReadM SNP 0017.scaffold00052 74035 1 A G - ReadM SNP 0017.scaffold00052 74044 1 A G - ReadM SNP 0017.scaffold00052 74107 1 G A - ReadM SNP 0017.scaffold00052 74275 1 T C - ReadM SNP 0017.scaffold00052 74347 1 A G - ReadM SNP 0017.scaffold00052 74634 1 T C - ReadM SNP 0017.scaffold00052 74666 1 T C - ReadM SNP 0017.scaffold00052 74799 1 G A - ReadM SNP 0017.scaffold00052 74959 1 G A - ReadM SNP 0017.scaffold00052 75276 1 C A - ReadM SNP 0017.scaffold00052 75621 1 A C - ReadM SNP 0017.scaffold00052 75667 1 T C - ReadM SNP 0017.scaffold00052 75817 1 A G - ReadM SNP 0017.scaffold00052 75838 1 G A - ReadM SNP 0017.scaffold00052 75968 1 A G - ReadM SNP 0017.scaffold00052 75985 1 C T - ReadM SNP 0017.scaffold00052 76657 1 C T - ReadM SNP 0017.scaffold00052 76672 1 C A - ReadM SNP 0017.scaffold00052 76865 1 G A - ReadM SNP 0017.scaffold00052 77113 1 C G - ReadM SNP 0017.scaffold00052 77494 1 T C - ReadM SNP 0017.scaffold00052 77587 1 C G - ReadM SNP 0017.scaffold00052 77610 1 G A - ScafM SNP 0017.scaffold00052 78189 1 T C scaffold3635 ScafM SNP 0017.scaffold00052 78325 1 G A scaffold3635 ScafM SNP 0017.scaffold00052 78379 1 T C scaffold3635 Both SNP 0017.scaffold00052 78528 1 A G scaffold3635 Both SNP 0017.scaffold00052 78552 1 C T scaffold3635 ReadM SNP 0017.scaffold00052 79203 1 G C - ReadM SNP 0017.scaffold00052 79606 1 A T - ReadM SNP 0017.scaffold00052 79661 1 A C - Both SNP 0017.scaffold00052 80194 1 G A scaffold3635 ReadM SNP 0017.scaffold00052 80313 1 G A - ReadM SNP 0017.scaffold00052 80362 1 T G - ReadM SNP 0017.scaffold00052 80368 1 T C - ReadM SNP 0017.scaffold00052 80423 1 A T - ReadM SNP 0017.scaffold00052 80591 1 C T - ReadM SNP 0017.scaffold00052 80762 1 T A - ReadM INDEL 0017.scaffold00052 81207 2 .. AG - ReadM SNP 0017.scaffold00052 81471 1 G T - ReadM SNP 0017.scaffold00052 81884 1 A G - ReadM SNP 0017.scaffold00052 83344 1 G T - ReadM SNP 0017.scaffold00052 83432 1 G T - ReadM SNP 0017.scaffold00052 83443 1 T G - ReadM SNP 0017.scaffold00052 83480 1 C G - ReadM SNP 0017.scaffold00052 83902 1 C T - ReadM SNP 0017.scaffold00052 84522 1 C G - ReadM INDEL 0017.scaffold00052 84693 1 . A - ReadM SNP 0017.scaffold00052 84705 1 G A - ReadM SNP 0017.scaffold00052 84916 1 A C - ReadM SNP 0017.scaffold00052 86238 1 A C - ReadM SNP 0017.scaffold00052 86351 1 T C - ReadM INDEL 0017.scaffold00052 86456 1 C . - ReadM SNP 0017.scaffold00052 86517 1 T C - ReadM SNP 0017.scaffold00052 87048 1 C T - ReadM SNP 0017.scaffold00052 88056 1 A G - ReadM SNP 0017.scaffold00052 88215 1 C T - ReadM SNP 0017.scaffold00052 88239 1 T C - ReadM SNP 0017.scaffold00052 88516 1 A T - ReadM SNP 0017.scaffold00052 89227 1 A T - ReadM SNP 0017.scaffold00052 89543 1 A C - ReadM SNP 0017.scaffold00052 89593 1 C T - ReadM SNP 0017.scaffold00052 90147 1 T C - ReadM SNP 0017.scaffold00052 90214 1 G A - Both SNP 0017.scaffold00052 90325 1 G C scaffold3635 Both SNP 0017.scaffold00052 90465 1 A G scaffold3635 Both INDEL 0017.scaffold00052 90504 3 ATT ... scaffold3635 Both SNP 0017.scaffold00052 90957 1 A T scaffold3635 ReadM SNP 0017.scaffold00052 91252 1 T A - ReadM SNP 0017.scaffold00052 91327 1 T C - Both SNP 0017.scaffold00052 91626 1 T A scaffold3635 ScafM INDEL 0017.scaffold00052 91834 1 . T scaffold3635 ScafM SNP 0017.scaffold00052 93049 1 T C scaffold3635 ScafM SNP 0017.scaffold00052 93567 1 C T scaffold3635 ScafM SNP 0017.scaffold00052 93930 1 G T scaffold3635 ScafM SNP 0017.scaffold00052 93933 1 G A scaffold3635 Both SNP 0017.scaffold00052 94717 1 C T scaffold3635 Both SNP 0017.scaffold00052 94725 1 G A scaffold3635 ScafM SNP 0017.scaffold00052 94768 1 A T scaffold3635 Both INDEL 0017.scaffold00052 95115 1 . T scaffold3635 ReadM SNP 0017.scaffold00052 95173 1 C G - ScafM SNP 0017.scaffold00052 97398 1 A G scaffold3635 ReadM SNP 0017.scaffold00052 97970 1 C T - ReadM SNP 0017.scaffold00052 98065 1 T C - ReadM SNP 0017.scaffold00052 98556 1 C T - ReadM SNP 0017.scaffold00052 99685 1 T A - Both SNP 0017.scaffold00052 99875 1 G A scaffold3635 ReadM INDEL 0017.scaffold00052 101811 1 G . - ReadM INDEL 0017.scaffold00052 101813 1 T . - ScafM SNP 0017.scaffold00052 104331 1 A G scaffold8637 ScafM SNP 0017.scaffold00052 104351 1 A G scaffold8637 ScafM SNP 0017.scaffold00052 104374 1 G C scaffold8637 ScafM SNP 0017.scaffold00052 104383 1 C T scaffold8637 ScafM INDEL 0017.scaffold00052 104402 11 ........... CACCACCTGCA scaffold8637 ScafM SNP 0017.scaffold00052 104497 2 TG CA scaffold8637 ScafM SNP 0017.scaffold00052 104839 2 AG CA scaffold19426 ScafM SNP 0017.scaffold00052 104847 1 T C scaffold19426 ScafM INDEL 0017.scaffold00052 104871 4 ...G CTTA scaffold19426 ScafM SNP 0017.scaffold00052 104901 1 G A scaffold19426 ScafM SNP 0017.scaffold00052 104916 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 104919 1 T G scaffold19426 ScafM SNP 0017.scaffold00052 104940 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 104957 1 C A scaffold19426 ScafM SNP 0017.scaffold00052 104973 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 104994 1 C A scaffold19426 ScafM SNP 0017.scaffold00052 105010 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 105037 1 T C scaffold19426 ScafM INDEL 0017.scaffold00052 105059 1 . A scaffold19426 ScafM SNP 0017.scaffold00052 105111 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105115 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105197 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 105199 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105222 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105262 1 A T scaffold19426 ScafM SNP 0017.scaffold00052 105275 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105308 1 T C scaffold19426 ScafM INDEL 0017.scaffold00052 105326 2 AT .. scaffold19426 ScafM SNP 0017.scaffold00052 105331 1 A C scaffold19426 ScafM INDEL 0017.scaffold00052 105333 3 TTC ... scaffold19426 ScafM SNP 0017.scaffold00052 105373 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105376 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105452 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105461 1 C A scaffold19426 ScafM SNP 0017.scaffold00052 105516 1 C G scaffold19426 ScafM SNP 0017.scaffold00052 105527 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105539 2 CG TA scaffold19426 ScafM SNP 0017.scaffold00052 105543 1 A C scaffold19426 ScafM SNP 0017.scaffold00052 105545 1 A T scaffold19426 ScafM SNP 0017.scaffold00052 105573 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105587 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105599 2 AT CC scaffold19426 ScafM INDEL 0017.scaffold00052 105674 1 . C scaffold19426 ScafM SNP 0017.scaffold00052 105677 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 105704 1 C A scaffold19426 ScafM SNP 0017.scaffold00052 105729 1 T C scaffold19426 ScafM SNP 0017.scaffold00052 105739 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 105750 1 T G scaffold19426 ScafM SNP 0017.scaffold00052 105848 2 AT CC scaffold19426 ScafM SNP 0017.scaffold00052 105860 1 G A scaffold19426 ScafM SNP 0017.scaffold00052 105865 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105914 1 C T scaffold19426 ScafM SNP 0017.scaffold00052 105955 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105972 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 105976 1 A G scaffold19426 ScafM SNP 0017.scaffold00052 106043 1 A T scaffold19426 ScafM SNP 0017.scaffold00052 106064 1 A T scaffold19426 ScafM INDEL 0017.scaffold00052 116552 1 . T scaffold2538 ScafM INDEL 0017.scaffold00052 123986 1 . A scaffold2538 ScafM SNP 0017.scaffold00052 129901 1 C A scaffold2538 ReadM SNP 0017.scaffold00052 131958 1 C G - ScafM SNP 0017.scaffold00052 147058 1 A G scaffold11880 ScafM SNP 0017.scaffold00052 147063 1 C T scaffold11880 ScafM SNP 0017.scaffold00052 147069 1 C T scaffold11880 ScafM SNP 0017.scaffold00052 147100 1 T A scaffold11880 ScafM SNP 0017.scaffold00052 147106 1 C A scaffold11880 ScafM SNP 0017.scaffold00052 147134 2 GA AG scaffold11880 ScafM SNP 0017.scaffold00052 147140 1 T G scaffold11880 ScafM SNP 0017.scaffold00052 147163 1 C A scaffold11880 ScafM SNP 0017.scaffold00052 147171 1 G A scaffold11880 ScafM SNP 0017.scaffold00052 147180 1 C T scaffold11880 ScafM SNP 0017.scaffold00052 147211 1 G A scaffold11880 ScafM SNP 0017.scaffold00052 147226 1 G A scaffold11880 ScafM SNP 0017.scaffold00052 147247 1 C A scaffold11880 ScafM INDEL 0017.scaffold00052 147261 1 . C scaffold11880 ScafM SNP 0017.scaffold00052 147263 1 G C scaffold11880 ScafM SNP 0017.scaffold00052 147288 1 C T scaffold11880 ScafM SNP 0017.scaffold00052 147308 1 A G scaffold11880 ScafM INDEL 0017.scaffold00052 147321 5 ...GT AACAC scaffold11880 ScafM SNP 0017.scaffold00052 147347 1 A G scaffold11880 ScafM SNP 0017.scaffold00052 147536 1 C T scaffold10025 ScafM SNP 0017.scaffold00052 147538 1 A G scaffold10025 ScafM SNP 0017.scaffold00052 147540 1 A T scaffold10025 ScafM SNP 0017.scaffold00052 147554 1 T C scaffold10025 ScafM SNP 0017.scaffold00052 147556 1 G A scaffold10025 ScafM SNP 0017.scaffold00052 147569 1 T C scaffold10025 ScafM SNP 0017.scaffold00052 147598 2 CG TC scaffold10025 ScafM SNP 0017.scaffold00052 147603 1 C T scaffold10025 ScafM SNP 0017.scaffold00052 147626 1 A C scaffold10025 ScafM SNP 0017.scaffold00052 147643 1 A G scaffold10025 ScafM SNP 0017.scaffold00052 147656 1 G A scaffold10025 ScafM SNP 0017.scaffold00052 147658 1 A G scaffold10025 ScafM SNP 0017.scaffold00052 147665 1 C T scaffold10025 ScafM SNP 0017.scaffold00052 147683 1 T G scaffold10025 ScafM SNP 0017.scaffold00052 147693 1 C T scaffold10025 ReadM SNP 0017.scaffold00052 154401 1 G A - ReadM INDEL 0017.scaffold00052 157336 1 . G - ScafM INDEL 0017.scaffold00052 210869 1 . C scaffold33538 ReadM INDEL 0017.scaffold00052 214710 1 . T - ReadM SNP 0017.scaffold00052 223102 1 C T - ScafM SNP 0017.scaffold00052 226129 1 C T scaffold19127 ScafM INDEL 0017.scaffold00052 228194 1 . A scaffold13715 ReadM INDEL 0017.scaffold00052 230592 1 . T - Both INDEL 0017.scaffold00052 239251 1 A . scaffold13715 ScafM SNP 0017.scaffold00052 239472 1 A C scaffold13715 ScafM INDEL 0017.scaffold00052 239644 1 A . scaffold13715 ScafM SNP 0017.scaffold00052 293678 1 A G scaffold2323 ScafM SNP 0017.scaffold00052 293683 1 G A scaffold2323 ScafM SNP 0017.scaffold00052 293694 1 A G scaffold2323 ScafM SNP 0017.scaffold00052 293703 1 A T scaffold2323 ScafM SNP 0017.scaffold00052 293721 1 G A scaffold2323 ScafM SNP 0017.scaffold00052 293723 1 A T scaffold2323 ScafM SNP 0017.scaffold00052 307681 1 A G scaffold158 ScafM SNP 0017.scaffold00052 307737 1 A G scaffold158 ScafM INDEL 0017.scaffold00052 345769 1 . A scaffold34305 ScafM SNP 0017.scaffold00052 346526 1 T C scaffold34305 ScafM SNP 0017.scaffold00052 346528 1 C A scaffold34305 ScafM SNP 0017.scaffold00052 355741 1 A G scaffold21570 ScafM SNP 0017.scaffold00052 355929 1 A G scaffold21570 ReadM SNP 0017.scaffold00052 377073 1 A G - ScafM SNP 0017.scaffold00052 377207 1 C G scaffold16929 ScafM SNP 0017.scaffold00052 377229 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377235 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377240 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377248 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 377268 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377314 1 C A scaffold16929 ScafM SNP 0017.scaffold00052 377316 1 C A scaffold16929 ScafM SNP 0017.scaffold00052 377331 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 377362 1 A G scaffold16929 ScafM INDEL 0017.scaffold00052 377374 2 .. TT scaffold16929 ScafM SNP 0017.scaffold00052 377376 1 G T scaffold16929 ScafM SNP 0017.scaffold00052 377379 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 377384 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377386 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377392 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 377407 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 377433 1 C A scaffold16929 ScafM SNP 0017.scaffold00052 377467 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 377487 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 377525 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377532 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377536 1 G T scaffold16929 ScafM SNP 0017.scaffold00052 377556 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 377560 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 377584 1 T C scaffold16929 ScafM INDEL 0017.scaffold00052 377617 1 T . scaffold16929 ScafM SNP 0017.scaffold00052 377620 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 377653 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 377683 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 377693 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377696 2 CC TT scaffold16929 ScafM SNP 0017.scaffold00052 377716 2 AC GT scaffold16929 ScafM SNP 0017.scaffold00052 377719 1 T G scaffold16929 ScafM SNP 0017.scaffold00052 377796 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 377821 3 ACC TTT scaffold16929 ScafM SNP 0017.scaffold00052 377862 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 377879 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 377883 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377885 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 377892 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 377938 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 377961 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 377973 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 377977 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 378088 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 378100 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 378175 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 378187 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 378214 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 378217 1 G T scaffold16929 ScafM SNP 0017.scaffold00052 378232 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 378243 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 378247 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 378344 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 378353 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 378362 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 378411 1 G T scaffold16929 ScafM SNP 0017.scaffold00052 378491 1 G T scaffold16929 ScafM SNP 0017.scaffold00052 378512 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 378563 1 T C scaffold16929 ScafM INDEL 0017.scaffold00052 378607 1 T . scaffold16929 ScafM SNP 0017.scaffold00052 378622 1 A C scaffold16929 ScafM SNP 0017.scaffold00052 378647 1 T A scaffold16929 ScafM SNP 0017.scaffold00052 378653 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 378655 1 C G scaffold16929 ScafM SNP 0017.scaffold00052 378660 1 G A scaffold16929 ScafM SNP 0017.scaffold00052 378697 1 A G scaffold16929 ScafM SNP 0017.scaffold00052 378726 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 378741 1 C T scaffold16929 ScafM SNP 0017.scaffold00052 378746 1 T C scaffold16929 ScafM SNP 0017.scaffold00052 378753 1 A T scaffold16929 ScafM SNP 0017.scaffold00052 403737 1 G T scaffold2853 ScafM SNP 0017.scaffold00052 403752 1 G C scaffold2853 ScafM SNP 0017.scaffold00052 403757 1 G A scaffold2853 ScafM SNP 0017.scaffold00052 403760 1 G T scaffold2853 ScafM SNP 0017.scaffold00052 403780 1 G C scaffold2853 ScafM INDEL 0017.scaffold00052 403786 7 AAAAATA ....... scaffold2853 ScafM INDEL 0017.scaffold00052 403795 5 AGTAC ..... scaffold2853 ScafM SNP 0017.scaffold00052 403815 1 C G scaffold2853 ScafM SNP 0017.scaffold00052 403877 2 TT CC scaffold2853 Both INDEL 0017.scaffold00052 407793 2 TG .. scaffold2853 Both INDEL 0017.scaffold00052 437924 1 T . scaffold2853 ScafM SNP 0017.scaffold00052 446709 1 A G scaffold2853 Both INDEL 0017.scaffold00052 465951 2 AA .. scaffold2853 ReadM SNP 0017.scaffold00052 487046 1 C T - ScafM SNP 0017.scaffold00052 515814 1 C T scaffold30282 ScafM SNP 0017.scaffold00052 515889 1 C A scaffold30282 ScafM SNP 0017.scaffold00052 516691 1 T C scaffold30282 ScafM SNP 0017.scaffold00052 522500 1 C A scaffold8567 ScafM SNP 0017.scaffold00052 522575 1 A G scaffold8567 ScafM SNP 0017.scaffold00052 522585 1 A G scaffold8567 ScafM SNP 0017.scaffold00052 522607 1 G A scaffold8567 ScafM SNP 0017.scaffold00052 522611 1 C A scaffold8567 ScafM INDEL 0017.scaffold00052 522614 2 .. AC scaffold8567 ScafM SNP 0017.scaffold00052 526354 1 C T scaffold30417 ScafM SNP 0017.scaffold00052 526372 1 T C scaffold30417 ScafM SNP 0017.scaffold00052 526452 1 G A scaffold30417 ScafM SNP 0017.scaffold00052 526466 1 G T scaffold30417 ScafM SNP 0017.scaffold00052 526481 1 T G scaffold30417 ScafM SNP 0017.scaffold00052 526531 1 G A scaffold30417 ScafM SNP 0017.scaffold00052 526558 1 T C scaffold30417 ScafM SNP 0017.scaffold00052 526562 1 T G scaffold30417 ScafM SNP 0017.scaffold00052 526627 1 A T scaffold30417 ScafM SNP 0017.scaffold00052 527787 1 G T scaffold5110 ScafM SNP 0017.scaffold00052 527978 1 G A scaffold5110 ScafM SNP 0017.scaffold00052 528070 1 A G scaffold5110 ScafM SNP 0017.scaffold00052 528356 1 C T scaffold5110 Both INDEL 0017.scaffold00052 528848 1 . T scaffold5110 ScafM INDEL 0017.scaffold00052 532435 1 . A scaffold5110 ReadM SNP 0017.scaffold00052 559010 1 C T - ScafM INDEL 0017.scaffold00052 567259 1 . T scaffold12227 ScafM SNP 0017.scaffold00052 576669 1 T C scaffold8295 ScafM SNP 0017.scaffold00052 576832 1 C T scaffold8295 Both SNP 0017.scaffold00052 589264 1 G A scaffold12841 ScafM SNP 0017.scaffold00052 595966 1 A T scaffold28489 ScafM INDEL 0017.scaffold00052 595979 1 . G scaffold28489 ReadM INDEL 0018.scaffold00058 306 2 AT .. - ScafM SNP 0018.scaffold00058 7284 1 C T scaffold14646 ScafM SNP 0018.scaffold00058 7297 1 A T scaffold14646 ScafM SNP 0018.scaffold00058 7312 1 T C scaffold14646 ScafM SNP 0018.scaffold00058 7330 1 C T scaffold14646 ScafM SNP 0018.scaffold00058 7366 1 T C scaffold14646 ScafM SNP 0018.scaffold00058 7461 2 AA TT scaffold14646 ScafM SNP 0018.scaffold00058 7513 1 C T scaffold14646 ScafM SNP 0018.scaffold00058 7536 1 G A scaffold14646 ScafM SNP 0018.scaffold00058 7541 1 T C scaffold14646 ScafM SNP 0018.scaffold00058 7574 1 C A scaffold14646 ScafM SNP 0018.scaffold00058 7591 2 GC AT scaffold14646 ScafM SNP 0018.scaffold00058 7608 1 A G scaffold14646 ScafM SNP 0018.scaffold00058 7618 1 A G scaffold14646 ReadM SNP 0018.scaffold00058 29146 1 G A - ScafM SNP 0018.scaffold00058 29257 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 29275 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 29288 1 A C scaffold11868 ScafM INDEL 0018.scaffold00058 29362 3 ATA ... scaffold11868 ScafM SNP 0018.scaffold00058 29366 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 29390 2 TC CT scaffold11868 ScafM SNP 0018.scaffold00058 29412 1 C A scaffold11868 ScafM SNP 0018.scaffold00058 29459 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 29471 1 C T scaffold11868 ScafM INDEL 0018.scaffold00058 29490 1 C . scaffold11868 ScafM SNP 0018.scaffold00058 29510 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 29516 1 T G scaffold11868 ScafM SNP 0018.scaffold00058 29582 2 AA TC scaffold11868 ScafM SNP 0018.scaffold00058 29597 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 29614 2 GC AT scaffold11868 ScafM SNP 0018.scaffold00058 29629 1 T C scaffold11868 ScafM INDEL 0018.scaffold00058 29689 11 ........... TTGCATTTCTT scaffold11868 ScafM SNP 0018.scaffold00058 29700 1 C G scaffold11868 ScafM SNP 0018.scaffold00058 29705 1 C G scaffold11868 ScafM SNP 0018.scaffold00058 29719 2 AT CA scaffold11868 ScafM SNP 0018.scaffold00058 29735 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 29740 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 29785 1 T G scaffold11868 ScafM SNP 0018.scaffold00058 29803 1 G A scaffold11868 ScafM INDEL 0018.scaffold00058 29828 1 A . scaffold11868 ScafM SNP 0018.scaffold00058 29830 1 G C scaffold11868 ScafM SNP 0018.scaffold00058 29840 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 29844 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 29890 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 29902 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 29910 1 A C scaffold11868 ScafM SNP 0018.scaffold00058 29914 2 CG TA scaffold11868 ScafM SNP 0018.scaffold00058 29930 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 29934 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 29969 1 T G scaffold11868 ScafM SNP 0018.scaffold00058 29974 1 C T scaffold11868 ScafM INDEL 0018.scaffold00058 29983 3 ACA ... scaffold11868 ScafM SNP 0018.scaffold00058 29996 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 30018 1 C A scaffold11868 ScafM SNP 0018.scaffold00058 30039 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 30046 1 A G scaffold11868 ScafM INDEL 0018.scaffold00058 30051 1 G . scaffold11868 ScafM SNP 0018.scaffold00058 30059 1 A T scaffold11868 ScafM INDEL 0018.scaffold00058 30073 5 TGATC ..... scaffold11868 ScafM SNP 0018.scaffold00058 30097 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 30138 2 TA GG scaffold11868 ScafM SNP 0018.scaffold00058 30165 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 30247 1 A G scaffold11868 ScafM INDEL 0018.scaffold00058 30264 1 G . scaffold11868 ScafM SNP 0018.scaffold00058 30269 1 A C scaffold11868 ScafM SNP 0018.scaffold00058 30286 2 GA AT scaffold11868 ScafM SNP 0018.scaffold00058 30313 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 30317 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 30342 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 30347 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 30362 1 G T scaffold11868 ScafM SNP 0018.scaffold00058 30376 1 C G scaffold11868 ScafM SNP 0018.scaffold00058 30405 1 C T scaffold11868 Both SNP 0018.scaffold00058 33901 1 G A scaffold10284 ScafM INDEL 0018.scaffold00058 34006 2 .. AC scaffold10284 ScafM INDEL 0018.scaffold00058 34029 2 TT .. scaffold10284 ScafM SNP 0018.scaffold00058 34047 1 A G scaffold10284 ScafM SNP 0018.scaffold00058 34085 1 G A scaffold10284 ScafM SNP 0018.scaffold00058 34395 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 34397 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 34415 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 34419 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 34425 1 A T scaffold11868 ScafM INDEL 0018.scaffold00058 34428 2 AA .. scaffold11868 ScafM SNP 0018.scaffold00058 34436 1 G C scaffold11868 ScafM SNP 0018.scaffold00058 34454 1 T G scaffold11868 ScafM SNP 0018.scaffold00058 34576 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 34640 1 A T scaffold11868 ReadM SNP 0018.scaffold00058 35003 1 G A - ReadM INDEL 0018.scaffold00058 35671 1 T . - ReadM SNP 0018.scaffold00058 35782 1 G T - ReadM SNP 0018.scaffold00058 36069 1 C G - ReadM SNP 0018.scaffold00058 36165 1 C T - ReadM INDEL 0018.scaffold00058 36322 1 C . - Both SNP 0018.scaffold00058 36650 1 C A scaffold11868 Both SNP 0018.scaffold00058 36837 1 G A scaffold11868 Both SNP 0018.scaffold00058 37007 1 C T scaffold11868 Both SNP 0018.scaffold00058 37070 1 T G scaffold11868 Both SNP 0018.scaffold00058 37168 1 A G scaffold11868 ReadM SNP 0018.scaffold00058 37874 1 G A - ReadM SNP 0018.scaffold00058 37919 1 T C - ReadM SNP 0018.scaffold00058 38023 1 A T - ReadM SNP 0018.scaffold00058 38188 1 T A - ReadM SNP 0018.scaffold00058 38208 1 C G - ReadM INDEL 0018.scaffold00058 38317 1 . T - ScafM INDEL 0018.scaffold00058 38473 1 . T scaffold11868 ReadM SNP 0018.scaffold00058 38591 1 T C - ReadM SNP 0018.scaffold00058 38791 1 G A - ScafM SNP 0018.scaffold00058 38891 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 38991 1 G A scaffold11868 Both SNP 0018.scaffold00058 39013 1 T C scaffold11868 ReadM SNP 0018.scaffold00058 39466 1 T C - ReadM SNP 0018.scaffold00058 40026 1 G T - ReadM SNP 0018.scaffold00058 40216 1 G C - Both INDEL 0018.scaffold00058 40640 2 TT .. scaffold11868 Both INDEL 0018.scaffold00058 40737 1 T . scaffold11868 Both SNP 0018.scaffold00058 40930 1 G A scaffold11868 ScafM INDEL 0018.scaffold00058 40960 3 ... CTA scaffold11868 Both SNP 0018.scaffold00058 40996 1 A T scaffold11868 ReadM SNP 0018.scaffold00058 41068 1 T C - ReadM SNP 0018.scaffold00058 41298 1 G A - ReadM SNP 0018.scaffold00058 41313 1 T C - ReadM SNP 0018.scaffold00058 41349 1 C T - ScafM SNP 0018.scaffold00058 41439 1 T C scaffold11868 ScafM INDEL 0018.scaffold00058 41480 1 . T scaffold11868 Both INDEL 0018.scaffold00058 41613 1 . C scaffold11868 Both SNP 0018.scaffold00058 42181 1 A T scaffold11868 ScafM INDEL 0018.scaffold00058 42644 1 . A scaffold11868 ScafM INDEL 0018.scaffold00058 42668 3 AGG ... scaffold11868 ScafM SNP 0018.scaffold00058 42706 1 G A scaffold11868 ReadM SNP 0018.scaffold00058 42884 1 C T - ReadM SNP 0018.scaffold00058 43163 1 G A - ScafM INDEL 0018.scaffold00058 43469 4 .... GATT scaffold11868 ScafM SNP 0018.scaffold00058 43513 1 G T scaffold11868 ScafM SNP 0018.scaffold00058 43535 2 GG TA scaffold11868 ScafM SNP 0018.scaffold00058 43544 1 A C scaffold11868 Both SNP 0018.scaffold00058 43621 1 T C scaffold11868 Both SNP 0018.scaffold00058 43638 1 T A scaffold11868 Both SNP 0018.scaffold00058 43659 1 A G scaffold11868 ReadM INDEL 0018.scaffold00058 43933 1 . T - ReadM SNP 0018.scaffold00058 44028 1 G A - ReadM SNP 0018.scaffold00058 44037 1 C T - Both SNP 0018.scaffold00058 44068 1 C A scaffold11868 ReadM SNP 0018.scaffold00058 44411 1 C T - ReadM SNP 0018.scaffold00058 44536 1 T C - Both SNP 0018.scaffold00058 44632 1 T C scaffold11868 Both SNP 0018.scaffold00058 44656 1 G A scaffold11868 Both SNP 0018.scaffold00058 44677 1 T C scaffold11868 Both SNP 0018.scaffold00058 44708 1 G T scaffold11868 Both SNP 0018.scaffold00058 44773 1 G A scaffold11868 ReadM SNP 0018.scaffold00058 45298 1 A G - ScafM INDEL 0018.scaffold00058 45427 5 TTAAA ..... scaffold11868 Both SNP 0018.scaffold00058 45476 1 G C scaffold11868 Both SNP 0018.scaffold00058 45482 1 A G scaffold11868 ScafM INDEL 0018.scaffold00058 45524 2 .. TT scaffold11868 ScafM INDEL 0018.scaffold00058 45640 6 AAGGGG .....C scaffold11868 ScafM INDEL 0018.scaffold00058 45698 2 AA .. scaffold11868 ReadM SNP 0018.scaffold00058 45777 1 T A - ReadM SNP 0018.scaffold00058 45780 1 T C - Both SNP 0018.scaffold00058 45949 1 G A scaffold11868 Both SNP 0018.scaffold00058 45982 1 G A scaffold11868 Both SNP 0018.scaffold00058 46016 1 C G scaffold11868 ReadM SNP 0018.scaffold00058 46068 1 C T - ScafM SNP 0018.scaffold00058 46068 2 CG TA scaffold11868 Both SNP 0018.scaffold00058 46139 1 T C scaffold11868 Both SNP 0018.scaffold00058 46214 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 46247 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 46254 1 A T scaffold11868 ScafM INDEL 0018.scaffold00058 46258 9 CGACCTATT ......... scaffold11868 ScafM SNP 0018.scaffold00058 46278 1 A G scaffold11868 Both SNP 0018.scaffold00058 46419 1 C T scaffold11868 Both SNP 0018.scaffold00058 46424 1 T G scaffold11868 Both SNP 0018.scaffold00058 46449 1 G T scaffold11868 Both INDEL 0018.scaffold00058 46631 1 G . scaffold11868 Both SNP 0018.scaffold00058 46675 1 A G scaffold11868 Both SNP 0018.scaffold00058 46685 1 T G scaffold11868 ReadM SNP 0018.scaffold00058 46955 1 C A - ReadM SNP 0018.scaffold00058 46999 1 A G - ReadM SNP 0018.scaffold00058 47007 1 G A - ReadM SNP 0018.scaffold00058 47020 1 T C - ScafM SNP 0018.scaffold00058 47124 1 G T scaffold11868 ScafM INDEL 0018.scaffold00058 47149 1 . T scaffold11868 ScafM SNP 0018.scaffold00058 47167 1 G C scaffold11868 ReadM SNP 0018.scaffold00058 47312 1 C A - ReadM SNP 0018.scaffold00058 47460 1 G A - ReadM SNP 0018.scaffold00058 47768 1 G T - ReadM SNP 0018.scaffold00058 47885 1 T G - ReadM SNP 0018.scaffold00058 48085 1 C T - ReadM SNP 0018.scaffold00058 48142 1 T C - ReadM SNP 0018.scaffold00058 48159 1 A T - Both SNP 0018.scaffold00058 48457 1 C A scaffold11868 ScafM SNP 0018.scaffold00058 48563 1 A T scaffold11868 Both SNP 0018.scaffold00058 49223 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 49334 1 T A scaffold11868 ReadM SNP 0018.scaffold00058 49354 1 A G - ReadM SNP 0018.scaffold00058 49385 1 C T - ReadM SNP 0018.scaffold00058 49579 1 A T - ReadM SNP 0018.scaffold00058 49614 1 G A - ReadM SNP 0018.scaffold00058 49637 1 T C - ReadM SNP 0018.scaffold00058 49714 1 A C - ReadM SNP 0018.scaffold00058 49766 1 T A - ReadM SNP 0018.scaffold00058 49776 1 C T - ReadM SNP 0018.scaffold00058 49811 1 T C - ScafM SNP 0018.scaffold00058 49896 2 GC TT scaffold11868 ScafM SNP 0018.scaffold00058 49915 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 49919 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 49923 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 49925 1 T A scaffold11868 Both SNP 0018.scaffold00058 49944 1 C T scaffold11868 ReadM SNP 0018.scaffold00058 50061 1 T G - ReadM SNP 0018.scaffold00058 50099 1 G A - ReadM SNP 0018.scaffold00058 50130 1 G T - ReadM SNP 0018.scaffold00058 50153 1 C G - ReadM SNP 0018.scaffold00058 50232 1 G A - ReadM SNP 0018.scaffold00058 50355 1 T C - ReadM SNP 0018.scaffold00058 50414 1 T C - ReadM SNP 0018.scaffold00058 50449 1 T A - ReadM SNP 0018.scaffold00058 50476 1 C T - ReadM SNP 0018.scaffold00058 50509 1 G T - ReadM SNP 0018.scaffold00058 50546 1 A G - ReadM SNP 0018.scaffold00058 50649 1 T G - ReadM SNP 0018.scaffold00058 50698 1 G A - Both SNP 0018.scaffold00058 50742 1 A T scaffold11868 Both SNP 0018.scaffold00058 50819 1 T C scaffold11868 Both SNP 0018.scaffold00058 50897 1 A C scaffold11868 ReadM SNP 0018.scaffold00058 50937 1 T C - Both SNP 0018.scaffold00058 51045 1 A T scaffold11868 Both SNP 0018.scaffold00058 51071 1 A G scaffold11868 Both SNP 0018.scaffold00058 51102 1 A T scaffold11868 Both SNP 0018.scaffold00058 51124 1 C T scaffold11868 Both SNP 0018.scaffold00058 51187 1 C T scaffold11868 Both SNP 0018.scaffold00058 51242 1 C T scaffold11868 Both SNP 0018.scaffold00058 51280 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 51282 1 G A scaffold11868 ReadM SNP 0018.scaffold00058 51378 1 A G - ReadM SNP 0018.scaffold00058 51389 1 A G - ReadM INDEL 0018.scaffold00058 51505 1 T . - ReadM SNP 0018.scaffold00058 51593 1 C G - ReadM SNP 0018.scaffold00058 51628 1 G A - ReadM SNP 0018.scaffold00058 51735 1 T C - ReadM SNP 0018.scaffold00058 51793 1 G A - ReadM SNP 0018.scaffold00058 51869 1 G A - ReadM SNP 0018.scaffold00058 51883 1 C A - ReadM SNP 0018.scaffold00058 51902 1 C G - ReadM SNP 0018.scaffold00058 51923 2 TT GA - ReadM SNP 0018.scaffold00058 52032 1 T A - ReadM SNP 0018.scaffold00058 52097 1 C T - ReadM SNP 0018.scaffold00058 52113 1 T C - ReadM SNP 0018.scaffold00058 52274 1 T C - ReadM INDEL 0018.scaffold00058 52302 1 . T - ReadM SNP 0018.scaffold00058 52336 1 T C - ReadM SNP 0018.scaffold00058 52487 1 G A - ReadM INDEL 0018.scaffold00058 52661 1 . A - ReadM SNP 0018.scaffold00058 52743 1 T C - ReadM SNP 0018.scaffold00058 52845 1 A T - ReadM SNP 0018.scaffold00058 52935 1 T G - ReadM SNP 0018.scaffold00058 52943 1 T C - ReadM SNP 0018.scaffold00058 53016 1 T A - ReadM SNP 0018.scaffold00058 53067 1 G C - ReadM SNP 0018.scaffold00058 53089 1 T C - ReadM SNP 0018.scaffold00058 53109 1 C A - ReadM SNP 0018.scaffold00058 53148 1 A G - ReadM SNP 0018.scaffold00058 53159 1 T C - ReadM SNP 0018.scaffold00058 53165 1 A T - ReadM SNP 0018.scaffold00058 53249 1 G A - ReadM SNP 0018.scaffold00058 53302 1 G A - ReadM SNP 0018.scaffold00058 53340 1 T C - ReadM SNP 0018.scaffold00058 53348 1 T C - ReadM SNP 0018.scaffold00058 53425 1 G A - ReadM SNP 0018.scaffold00058 53438 1 G A - ReadM SNP 0018.scaffold00058 53604 1 G A - ReadM SNP 0018.scaffold00058 53629 1 G A - ReadM SNP 0018.scaffold00058 53653 1 A G - ReadM SNP 0018.scaffold00058 53683 1 C A - ReadM SNP 0018.scaffold00058 53789 1 G A - ReadM SNP 0018.scaffold00058 53816 1 T C - ReadM SNP 0018.scaffold00058 53868 1 G A - ReadM SNP 0018.scaffold00058 53886 1 A G - ReadM SNP 0018.scaffold00058 53983 1 G A - ReadM SNP 0018.scaffold00058 54017 1 C A - ReadM SNP 0018.scaffold00058 54054 1 G T - ReadM SNP 0018.scaffold00058 54087 1 G A - ReadM SNP 0018.scaffold00058 54131 1 C T - ReadM SNP 0018.scaffold00058 54160 1 T G - ReadM SNP 0018.scaffold00058 54181 1 C G - ReadM SNP 0018.scaffold00058 54242 1 A G - ReadM SNP 0018.scaffold00058 54291 1 T G - ReadM SNP 0018.scaffold00058 54416 1 C G - ReadM SNP 0018.scaffold00058 54433 1 T C - ReadM SNP 0018.scaffold00058 54443 1 C T - ReadM SNP 0018.scaffold00058 54452 1 A C - ReadM SNP 0018.scaffold00058 54556 1 G A - ReadM SNP 0018.scaffold00058 54691 1 C A - ReadM SNP 0018.scaffold00058 54900 1 A G - ReadM SNP 0018.scaffold00058 54930 1 G A - ReadM INDEL 0018.scaffold00058 54951 1 C . - Both SNP 0018.scaffold00058 55107 1 G C scaffold11868 ScafM SNP 0018.scaffold00058 55153 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 55166 1 A C scaffold11868 Both SNP 0018.scaffold00058 55361 1 A G scaffold11868 Both SNP 0018.scaffold00058 55383 1 T A scaffold11868 Both SNP 0018.scaffold00058 55389 1 A G scaffold11868 ScafM INDEL 0018.scaffold00058 55461 4 TAGC .... scaffold11868 ScafM SNP 0018.scaffold00058 55473 1 T C scaffold11868 Both SNP 0018.scaffold00058 55586 1 A C scaffold11868 ScafM SNP 0018.scaffold00058 55748 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 55753 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 55756 1 C G scaffold11868 ScafM SNP 0018.scaffold00058 55776 1 T A scaffold11868 ScafM INDEL 0018.scaffold00058 55961 1 . T scaffold11868 Both SNP 0018.scaffold00058 56643 1 A G scaffold11868 Both SNP 0018.scaffold00058 56677 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 56732 1 A G scaffold11868 Both SNP 0018.scaffold00058 56765 1 A C scaffold11868 Both SNP 0018.scaffold00058 56818 1 T G scaffold11868 Both SNP 0018.scaffold00058 56827 1 A G scaffold11868 ScafM SNP 0018.scaffold00058 56847 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 56891 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 56898 1 C A scaffold11868 Both SNP 0018.scaffold00058 56933 1 C T scaffold11868 Both SNP 0018.scaffold00058 57005 1 T C scaffold11868 Both SNP 0018.scaffold00058 57025 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 57048 1 C T scaffold11868 ReadM SNP 0018.scaffold00058 57220 1 A G - ReadM INDEL 0018.scaffold00058 57236 1 A . - ScafM SNP 0018.scaffold00058 57551 1 C G scaffold11868 ScafM SNP 0018.scaffold00058 58248 1 T G scaffold11868 ScafM INDEL 0018.scaffold00058 58516 2 TT .. scaffold11868 ScafM SNP 0018.scaffold00058 58561 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 58595 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 58666 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 58727 1 G T scaffold11868 ScafM SNP 0018.scaffold00058 58750 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 58752 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 58773 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 58775 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 58778 1 G C scaffold11868 ScafM SNP 0018.scaffold00058 58782 1 T A scaffold11868 ScafM SNP 0018.scaffold00058 58822 1 C T scaffold11868 ScafM SNP 0018.scaffold00058 58849 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 58854 1 G A scaffold11868 ScafM SNP 0018.scaffold00058 58889 1 C G scaffold11868 Both SNP 0018.scaffold00058 60109 1 G A scaffold11868 Both SNP 0018.scaffold00058 60370 1 G T scaffold11868 Both SNP 0018.scaffold00058 60725 1 C T scaffold11868 Both SNP 0018.scaffold00058 60946 1 T A scaffold11868 Both SNP 0018.scaffold00058 61983 1 C T scaffold11868 Both SNP 0018.scaffold00058 61986 1 C G scaffold11868 Both SNP 0018.scaffold00058 62196 1 C T scaffold11868 Both INDEL 0018.scaffold00058 62471 1 . A scaffold11868 Both SNP 0018.scaffold00058 62502 1 C T scaffold11868 Both SNP 0018.scaffold00058 62715 1 A T scaffold11868 ScafM SNP 0018.scaffold00058 62740 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 62919 1 T C scaffold11868 ScafM SNP 0018.scaffold00058 62931 1 G C scaffold11868 ScafM SNP 0018.scaffold00058 62945 1 C T scaffold11868 Both SNP 0018.scaffold00058 63045 1 G A scaffold11868 ReadM SNP 0018.scaffold00058 66770 1 A C - ReadM SNP 0018.scaffold00058 66904 1 A G - ReadM SNP 0018.scaffold00058 66976 1 G T - ReadM SNP 0018.scaffold00058 67165 1 C T - ReadM SNP 0018.scaffold00058 67256 1 C T - ReadM SNP 0018.scaffold00058 67273 1 C T - ReadM SNP 0018.scaffold00058 67333 1 G T - ReadM SNP 0018.scaffold00058 67505 1 T A - ReadM SNP 0018.scaffold00058 67712 1 G A - ReadM SNP 0018.scaffold00058 67715 1 C T - ReadM SNP 0018.scaffold00058 70459 1 T C - ReadM SNP 0018.scaffold00058 70492 1 T C - ReadM SNP 0018.scaffold00058 70530 1 C G - ReadM SNP 0018.scaffold00058 70546 1 G A - ReadM SNP 0018.scaffold00058 70607 1 G A - ReadM SNP 0018.scaffold00058 70838 1 A G - ReadM SNP 0018.scaffold00058 70932 1 C T - ReadM SNP 0018.scaffold00058 71047 1 C T - ReadM SNP 0018.scaffold00058 74547 1 A G - ReadM SNP 0018.scaffold00058 74874 1 A T - ReadM SNP 0018.scaffold00058 74913 1 G A - Both SNP 0018.scaffold00058 75837 1 T A scaffold2070 ReadM SNP 0018.scaffold00058 76019 1 T C - ReadM SNP 0018.scaffold00058 76061 1 A G - ReadM SNP 0018.scaffold00058 76188 1 T C - ReadM SNP 0018.scaffold00058 76215 1 T A - ReadM SNP 0018.scaffold00058 76267 1 T C - ReadM SNP 0018.scaffold00058 76327 1 T G - ReadM SNP 0018.scaffold00058 76382 1 A G - ReadM SNP 0018.scaffold00058 76399 1 C A - ReadM SNP 0018.scaffold00058 76815 1 C T - ReadM SNP 0018.scaffold00058 76839 1 C A - ReadM SNP 0018.scaffold00058 76952 1 G T - ReadM SNP 0018.scaffold00058 76967 1 C T - ReadM SNP 0018.scaffold00058 77145 1 G C - ReadM SNP 0018.scaffold00058 77217 1 T C - ReadM SNP 0018.scaffold00058 77391 1 A G - ReadM SNP 0018.scaffold00058 77449 1 G A - ReadM SNP 0018.scaffold00058 77570 1 A C - ReadM SNP 0018.scaffold00058 77596 1 A C - ReadM SNP 0018.scaffold00058 78059 1 T C - ReadM SNP 0018.scaffold00058 78242 1 G A - ReadM SNP 0018.scaffold00058 78568 1 C T - ReadM SNP 0018.scaffold00058 79098 1 C T - ReadM SNP 0018.scaffold00058 79242 1 T C - ReadM SNP 0018.scaffold00058 79280 1 T C - ReadM SNP 0018.scaffold00058 80358 1 T C - ReadM SNP 0018.scaffold00058 80446 1 G A - ReadM SNP 0018.scaffold00058 80525 1 A G - ReadM SNP 0018.scaffold00058 80550 1 G A - ReadM SNP 0018.scaffold00058 80769 1 T G - ReadM SNP 0018.scaffold00058 80779 1 G A - ReadM SNP 0018.scaffold00058 80817 1 C T - ReadM SNP 0018.scaffold00058 81422 1 C T - ReadM SNP 0018.scaffold00058 81818 1 G T - ReadM SNP 0018.scaffold00058 82266 1 C T - ReadM SNP 0018.scaffold00058 82303 1 A G - ReadM SNP 0018.scaffold00058 82521 1 T C - ReadM SNP 0018.scaffold00058 82529 1 G T - ReadM SNP 0018.scaffold00058 82778 1 C A - ReadM SNP 0018.scaffold00058 82835 1 C A - ReadM SNP 0018.scaffold00058 82880 1 A G - ReadM SNP 0018.scaffold00058 83110 1 G A - ReadM SNP 0018.scaffold00058 83152 1 C A - ReadM SNP 0018.scaffold00058 83647 1 C T - ReadM SNP 0018.scaffold00058 83696 1 T C - ReadM SNP 0018.scaffold00058 83991 1 A T - ReadM SNP 0018.scaffold00058 84040 1 C A - ReadM SNP 0018.scaffold00058 84270 1 G A - ReadM SNP 0018.scaffold00058 84613 1 T G - ReadM SNP 0018.scaffold00058 85038 1 T C - ReadM SNP 0018.scaffold00058 85151 1 G A - ReadM SNP 0018.scaffold00058 85262 1 A G - ReadM SNP 0018.scaffold00058 85443 1 C A - ReadM SNP 0018.scaffold00058 85571 1 T A - ReadM SNP 0018.scaffold00058 86763 1 T A - ReadM SNP 0018.scaffold00058 86868 1 A C - ReadM SNP 0018.scaffold00058 86872 1 T C - ReadM SNP 0018.scaffold00058 86970 1 C A - ReadM SNP 0018.scaffold00058 87046 1 A G - ReadM SNP 0018.scaffold00058 87120 1 T C - ReadM SNP 0018.scaffold00058 87163 1 T G - ReadM SNP 0018.scaffold00058 87403 1 G A - ReadM SNP 0018.scaffold00058 87481 1 C T - ReadM INDEL 0018.scaffold00058 87527 2 TG .. - ReadM SNP 0018.scaffold00058 87596 1 A G - ReadM SNP 0018.scaffold00058 88069 1 A G - ReadM SNP 0018.scaffold00058 88705 1 C T - ReadM SNP 0018.scaffold00058 89286 1 A C - ReadM SNP 0018.scaffold00058 90026 1 G C - ReadM SNP 0018.scaffold00058 90405 1 T C - ReadM SNP 0018.scaffold00058 90453 1 T C - ReadM SNP 0018.scaffold00058 90872 1 A C - ReadM SNP 0018.scaffold00058 91305 1 A G - ReadM SNP 0018.scaffold00058 91696 1 A G - ReadM SNP 0018.scaffold00058 91699 1 T C - ReadM SNP 0018.scaffold00058 92103 1 G A - ReadM INDEL 0018.scaffold00058 92386 1 T . - ReadM SNP 0018.scaffold00058 92779 1 C T - ReadM SNP 0018.scaffold00058 93316 1 G A - ReadM SNP 0018.scaffold00058 94182 1 C T - ReadM SNP 0018.scaffold00058 94255 1 C T - ReadM SNP 0018.scaffold00058 94481 1 T C - ReadM SNP 0018.scaffold00058 94510 1 A G - ReadM SNP 0018.scaffold00058 94732 1 T C - ScafM INDEL 0018.scaffold00058 94983 2 .. TT scaffold21777 ReadM SNP 0018.scaffold00058 95221 1 G T - Both SNP 0018.scaffold00058 96823 1 T A scaffold20720 Both SNP 0018.scaffold00058 97046 1 G T scaffold20720 ReadM SNP 0018.scaffold00058 97306 1 T G - ReadM SNP 0018.scaffold00058 97311 1 A G - ReadM SNP 0018.scaffold00058 97534 1 T C - ReadM SNP 0018.scaffold00058 97613 1 T C - ReadM SNP 0018.scaffold00058 97632 1 G A - ReadM INDEL 0018.scaffold00058 97670 1 . A - ReadM SNP 0018.scaffold00058 97831 1 T G - ReadM SNP 0018.scaffold00058 98207 1 C T - ReadM SNP 0018.scaffold00058 98255 1 C G - ReadM SNP 0018.scaffold00058 98269 1 G A - ReadM SNP 0018.scaffold00058 98498 1 G A - ReadM SNP 0018.scaffold00058 98506 1 A C - ReadM SNP 0018.scaffold00058 98510 1 A T - ReadM SNP 0018.scaffold00058 98634 1 A G - ReadM SNP 0018.scaffold00058 98695 1 G A - ReadM SNP 0018.scaffold00058 98699 1 T C - ReadM SNP 0018.scaffold00058 98772 1 C T - ReadM SNP 0018.scaffold00058 99275 1 C T - ReadM SNP 0018.scaffold00058 99366 1 C T - ReadM SNP 0018.scaffold00058 99380 1 G A - ReadM SNP 0018.scaffold00058 99414 1 A C - ReadM SNP 0018.scaffold00058 99445 1 A G - ReadM SNP 0018.scaffold00058 100161 1 A G - ReadM SNP 0018.scaffold00058 100263 1 T C - ReadM INDEL 0018.scaffold00058 100943 1 . C - ReadM SNP 0018.scaffold00058 100966 1 T A - ReadM SNP 0018.scaffold00058 101013 1 C A - ReadM SNP 0018.scaffold00058 101491 1 G A - Both INDEL 0018.scaffold00058 101622 1 . T scaffold1649 Both SNP 0018.scaffold00058 101866 1 C G scaffold1649 Both SNP 0018.scaffold00058 101889 1 G A scaffold1649 Both SNP 0018.scaffold00058 101971 1 C A scaffold1649 Both SNP 0018.scaffold00058 102007 1 A G scaffold1649 Both SNP 0018.scaffold00058 102084 1 T C scaffold1649 Both SNP 0018.scaffold00058 102162 1 C T scaffold1649 Both SNP 0018.scaffold00058 102585 1 C T scaffold1649 Both SNP 0018.scaffold00058 102607 1 C G scaffold1649 Both SNP 0018.scaffold00058 102686 1 G A scaffold1649 Both SNP 0018.scaffold00058 102799 1 C T scaffold1649 Both SNP 0018.scaffold00058 102979 1 A G scaffold1649 Both INDEL 0018.scaffold00058 103179 1 G . scaffold1649 Both SNP 0018.scaffold00058 103273 1 A G scaffold1649 Both SNP 0018.scaffold00058 103285 1 C G scaffold1649 Both SNP 0018.scaffold00058 103433 1 G A scaffold1649 Both SNP 0018.scaffold00058 103489 1 A C scaffold1649 ScafM INDEL 0018.scaffold00058 103897 31 ............................... CAACAAGAACAAGATGTCTATTTTTGTTACT scaffold1649 Both SNP 0018.scaffold00058 104331 1 T C scaffold1649 Both SNP 0018.scaffold00058 104346 1 G C scaffold1649 Both INDEL 0018.scaffold00058 104425 1 . A scaffold1649 ScafM SNP 0018.scaffold00058 104479 1 A G scaffold1649 ScafM SNP 0018.scaffold00058 105026 1 C T scaffold1649 Both SNP 0018.scaffold00058 106031 1 T C scaffold1649 ScafM SNP 0018.scaffold00058 106099 1 C T scaffold1649 ScafM SNP 0018.scaffold00058 106181 1 G A scaffold1649 Both SNP 0018.scaffold00058 106495 1 T C scaffold1649 ReadM SNP 0018.scaffold00058 108080 1 C G - ReadM SNP 0018.scaffold00058 108395 1 A G - ReadM SNP 0018.scaffold00058 108432 1 A G - ReadM SNP 0018.scaffold00058 108693 1 T A - ReadM SNP 0018.scaffold00058 108806 1 C T - ReadM SNP 0018.scaffold00058 109001 1 A T - ReadM SNP 0018.scaffold00058 109085 1 C T - ReadM SNP 0018.scaffold00058 109144 1 A T - ReadM SNP 0018.scaffold00058 109330 1 A T - ReadM SNP 0018.scaffold00058 109879 1 A C - Both SNP 0018.scaffold00058 110302 1 C T scaffold1649 Both SNP 0018.scaffold00058 110619 1 C T scaffold1649 Both SNP 0018.scaffold00058 111066 1 A C scaffold1649 Both SNP 0018.scaffold00058 111250 1 G A scaffold1649 Both SNP 0018.scaffold00058 111686 1 A T scaffold1649 Both SNP 0018.scaffold00058 111722 1 A T scaffold1649 Both INDEL 0018.scaffold00058 111760 2 TT .. scaffold1649 Both SNP 0018.scaffold00058 111802 1 C T scaffold1649 Both SNP 0018.scaffold00058 111994 1 T C scaffold1649 Both SNP 0018.scaffold00058 112114 1 A G scaffold1649 ScafM SNP 0018.scaffold00058 112152 1 A G scaffold1649 Both INDEL 0018.scaffold00058 112190 1 . C scaffold1649 Both SNP 0018.scaffold00058 112251 1 T G scaffold1649 Both SNP 0018.scaffold00058 112261 1 T A scaffold1649 Both SNP 0018.scaffold00058 112333 1 A G scaffold1649 Both SNP 0018.scaffold00058 112379 1 A T scaffold1649 Both SNP 0018.scaffold00058 112407 1 C T scaffold1649 Both SNP 0018.scaffold00058 112531 1 C G scaffold1649 Both SNP 0018.scaffold00058 112721 1 C T scaffold1649 Both SNP 0018.scaffold00058 112909 1 C T scaffold1649 ScafM SNP 0018.scaffold00058 113040 1 G A scaffold1649 Both SNP 0018.scaffold00058 113407 1 C T scaffold1649 ScafM INDEL 0018.scaffold00058 113456 1 . A scaffold1649 ScafM INDEL 0018.scaffold00058 113459 1 . A scaffold1649 Both SNP 0018.scaffold00058 113469 1 C A scaffold1649 Both SNP 0018.scaffold00058 113665 1 T C scaffold1649 ReadM SNP 0018.scaffold00058 113752 1 G A - ReadM SNP 0018.scaffold00058 113794 1 T C - ReadM SNP 0018.scaffold00058 114049 1 C A - ReadM SNP 0018.scaffold00058 114130 1 T C - ReadM SNP 0018.scaffold00058 114383 1 C A - ReadM SNP 0018.scaffold00058 114462 1 T C - ReadM SNP 0018.scaffold00058 114674 1 C A - ReadM SNP 0018.scaffold00058 115049 1 T G - ReadM SNP 0018.scaffold00058 115080 1 A G - ReadM SNP 0018.scaffold00058 115084 1 A G - ReadM SNP 0018.scaffold00058 117345 1 T A - ReadM SNP 0018.scaffold00058 117385 1 A G - ReadM SNP 0018.scaffold00058 117417 1 A G - ReadM SNP 0018.scaffold00058 117487 1 G C - ReadM SNP 0018.scaffold00058 117746 1 G A - ReadM SNP 0018.scaffold00058 118236 1 C T - ReadM SNP 0018.scaffold00058 118485 1 T A - ReadM SNP 0018.scaffold00058 118634 1 G T - ReadM SNP 0018.scaffold00058 118741 1 C T - ReadM SNP 0018.scaffold00058 118766 1 G C - ReadM SNP 0018.scaffold00058 118854 1 C T - ReadM SNP 0018.scaffold00058 118913 1 T C - ReadM SNP 0018.scaffold00058 118977 1 C A - ReadM SNP 0018.scaffold00058 119113 1 C T - ReadM SNP 0018.scaffold00058 119211 1 A C - ReadM SNP 0018.scaffold00058 119251 1 A G - ReadM SNP 0018.scaffold00058 119478 1 C G - ReadM SNP 0018.scaffold00058 119588 1 G A - ReadM SNP 0018.scaffold00058 119756 1 A T - ReadM SNP 0018.scaffold00058 119900 1 G T - ReadM SNP 0018.scaffold00058 120244 1 C A - ReadM SNP 0018.scaffold00058 120445 1 A C - ReadM SNP 0018.scaffold00058 120820 1 T C - ReadM SNP 0018.scaffold00058 120925 1 C T - ReadM SNP 0018.scaffold00058 121579 1 C T - ReadM SNP 0018.scaffold00058 121709 1 G C - ReadM SNP 0018.scaffold00058 121788 1 C T - ReadM SNP 0018.scaffold00058 121893 1 C T - ReadM SNP 0018.scaffold00058 122358 1 C T - ReadM SNP 0018.scaffold00058 122991 1 G T - ReadM SNP 0018.scaffold00058 123009 1 G A - ReadM SNP 0018.scaffold00058 123107 1 G A - ReadM SNP 0018.scaffold00058 123251 1 C A - ReadM SNP 0018.scaffold00058 123326 1 A C - ReadM SNP 0018.scaffold00058 123505 1 A C - ReadM SNP 0018.scaffold00058 123529 1 T C - ReadM SNP 0018.scaffold00058 123860 1 C T - ReadM SNP 0018.scaffold00058 124100 1 T A - ReadM SNP 0018.scaffold00058 124222 1 T C - ReadM SNP 0018.scaffold00058 124740 1 C T - ReadM SNP 0018.scaffold00058 124785 1 A G - ReadM SNP 0018.scaffold00058 124815 1 A G - ReadM SNP 0018.scaffold00058 124923 1 G A - ReadM SNP 0018.scaffold00058 125033 1 T C - ScafM SNP 0018.scaffold00058 144271 1 T C scaffold17404 ScafM SNP 0018.scaffold00058 144314 1 T C scaffold17404 ReadM SNP 0018.scaffold00058 144657 1 T G - ReadM SNP 0018.scaffold00058 146993 1 A C - ReadM SNP 0018.scaffold00058 147031 1 A T - ReadM SNP 0018.scaffold00058 147060 1 C T - ReadM SNP 0018.scaffold00058 147081 1 A C - ReadM SNP 0018.scaffold00058 147402 1 C T - ReadM SNP 0018.scaffold00058 147510 1 C T - Both SNP 0018.scaffold00058 147648 1 T A scaffold31087 Both SNP 0018.scaffold00058 147733 1 C T scaffold31087 Both SNP 0018.scaffold00058 147742 1 G A scaffold31087 Both SNP 0018.scaffold00058 147885 1 T C scaffold31087 Both SNP 0018.scaffold00058 147920 1 C T scaffold31087 Both SNP 0018.scaffold00058 147949 1 C A scaffold31087 Both INDEL 0018.scaffold00058 147965 1 . C scaffold31087 Both SNP 0018.scaffold00058 148518 1 C T scaffold31087 Both SNP 0018.scaffold00058 148728 1 C T scaffold31087 Both SNP 0018.scaffold00058 149136 1 T A scaffold31087 ReadM SNP 0018.scaffold00058 149250 1 T C - ReadM SNP 0018.scaffold00058 149373 2 TT CA - ReadM INDEL 0018.scaffold00058 149594 1 . T - ReadM SNP 0018.scaffold00058 149662 1 G A - ReadM SNP 0018.scaffold00058 149721 1 G T - ReadM SNP 0018.scaffold00058 149847 1 A G - ReadM INDEL 0018.scaffold00058 149998 1 . A - Both SNP 0018.scaffold00058 150285 1 T C scaffold31087 Both SNP 0018.scaffold00058 150492 1 A G scaffold31087 ScafM SNP 0018.scaffold00058 150730 1 C T scaffold31087 ScafM SNP 0018.scaffold00058 150756 1 A G scaffold31087 ScafM SNP 0018.scaffold00058 150797 1 G A scaffold31087 Sca